locus-tag	class	description
FDV79_00010	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
FDV79_00015	COG4232	protein-disulfide reductase activity
FDV79_00025	COG3263	regulation of cellular component size
FDV79_00035	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FDV79_00060	COG2198	Histidine kinase
FDV79_00060	COG2205	protein histidine kinase activity
FDV79_00060	COG0784	Response regulator, receiver
FDV79_00065	COG2814	Major facilitator Superfamily
FDV79_00080	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FDV79_00085	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
FDV79_00090	COG0511	ligase activity, forming carbon-carbon bonds
FDV79_00095	COG0439	Biotin carboxylase
FDV79_00105	COG2264	protein methyltransferase activity
FDV79_00110	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FDV79_00115	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
FDV79_00120	COG2814	Major facilitator Superfamily
FDV79_00125	COG0488	(ABC) transporter
FDV79_00130	COG3706	GGDEF domain
FDV79_00145	COG3335	DDE superfamily endonuclease
FDV79_00235	COG1982	Orn Lys Arg decarboxylase major
FDV79_00240	COG0531	amino acid
FDV79_00250	COG3710	Transcriptional regulator
FDV79_00255	COG0789	Transcriptional regulator
FDV79_00265	COG0138	bifunctional purine biosynthesis protein purh
FDV79_00275	COG0151	Belongs to the GarS family
FDV79_00290	COG1253	flavin adenine dinucleotide binding
FDV79_00300	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FDV79_00305	COG1573	uracil-dna glycosylase
FDV79_00310	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
FDV79_00325	COG2816	NAD+ diphosphatase activity
FDV79_00330	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
FDV79_00335	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
FDV79_00340	COG0085	RNA polymerase activity
FDV79_00345	COG0222	ribosome binding
FDV79_00350	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
FDV79_00355	COG0081	regulation of translation
FDV79_00360	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
FDV79_00365	COG0250	Participates in transcription elongation, termination and antitermination
FDV79_00370	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FDV79_00380	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
FDV79_00415	COG0812	UDP-N-acetylmuramate dehydrogenase activity
FDV79_00425	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FDV79_00455	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
FDV79_00465	COG4206	TonB-dependent receptor
FDV79_00470	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FDV79_00485	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FDV79_00490	COG0534	Mate efflux family protein
FDV79_00495	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
FDV79_00500	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
FDV79_00515	COG2937	Belongs to the GPAT DAPAT family
FDV79_00520	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
FDV79_00525	COG3161	chorismate lyase activity
FDV79_00530	COG1580	Controls the rotational direction of flagella during chemotaxis
FDV79_00535	COG0705	Rhomboid family
FDV79_00540	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FDV79_00555	COG2177	Part of the ABC transporter FtsEX involved in
FDV79_00560	COG2884	Cell division ATP-binding protein ftsE
FDV79_00565	COG0552	protein localization to endoplasmic reticulum
FDV79_00570	COG0742	ribosomal rna small subunit methyltransferase
FDV79_00580	COG2095	MarC family integral membrane protein
FDV79_00635	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FDV79_00640	COG0640	Transcriptional regulator
FDV79_00645	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
FDV79_00650	COG1280	lysine exporter protein (LysE YggA)
FDV79_00655	COG2267	carboxylic ester hydrolase activity
FDV79_00665	COG0561	phosphatase activity
FDV79_00685	COG2199	diguanylate cyclase activity
FDV79_00685	COG3287	FIST C domain
FDV79_00685	COG2200	EAL domain
FDV79_00690	COG1011	Hydrolase
FDV79_00695	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
FDV79_00705	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
FDV79_00710	COG0019	diaminopimelate decarboxylase activity
FDV79_00720	COG1965	Belongs to the frataxin family
FDV79_00725	COG3072	Adenylate cyclase
FDV79_00730	COG0181	hydroxymethylbilane synthase activity
FDV79_00735	COG1587	Uroporphyrinogen-III synthase
FDV79_00740	COG2959	enzyme of heme biosynthesis
FDV79_00745	COG3071	HemY protein
FDV79_00800	COG0633	Ferredoxin
FDV79_00805	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
FDV79_00825	COG3118	belongs to the thioredoxin family
FDV79_00830	COG0513	Belongs to the DEAD box helicase family
FDV79_00835	COG0248	Ppx GppA phosphatase
FDV79_00840	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
FDV79_00855	COG0514	ATP-dependent DNA helicase (RecQ)
FDV79_00860	COG2962	Rard protein
FDV79_00870	COG1280	lysine exporter protein (LysE YggA)
FDV79_00875	COG0405	Gamma-glutamyltransferase
FDV79_00885	COG0210	DNA helicase
FDV79_00895	COG3220	belongs to the UPF0276 family
FDV79_00925	COG0006	proline dipeptidase activity
FDV79_00925	COG0006	proline dipeptidase activity
FDV79_00935	COG2022	thiamine diphosphate biosynthetic process
FDV79_00940	COG2104	thiamine diphosphate biosynthetic process
FDV79_00945	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FDV79_00950	COG0352	thiamine-phosphate diphosphorylase activity
FDV79_00955	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
FDV79_00960	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
FDV79_00980	COG3335	DDE superfamily endonuclease
FDV79_01025	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
FDV79_01035	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
FDV79_01040	COG0408	coproporphyrinogen oxidase activity
FDV79_01045	COG0009	L-threonylcarbamoyladenylate synthase
FDV79_01050	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
FDV79_01055	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
FDV79_01060	COG0551	DNA topoisomerase type I activity
FDV79_01065	COG2922	Belongs to the Smg family
FDV79_01070	COG0758	DNA mediated transformation
FDV79_01080	COG0242	peptide deformylase activity
FDV79_01085	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
FDV79_01090	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FDV79_01090	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FDV79_01095	COG0569	domain protein
FDV79_01100	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FDV79_01110	COG1272	protein, Hemolysin III
FDV79_01115	COG4326	sporulation control protein
FDV79_01125	COG3084	Protein conserved in bacteria
FDV79_01135	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
FDV79_01140	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FDV79_01145	COG0204	Acyl-transferase
FDV79_01155	COG0606	chelatase, subunit chli
FDV79_01165	COG3978	acetolactate synthase activity
FDV79_01170	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FDV79_01175	COG0129	dihydroxy-acid dehydratase activity
FDV79_01185	COG0583	DNA-binding transcription factor activity
FDV79_01190	COG2814	Major facilitator Superfamily
FDV79_01195	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FDV79_01200	COG0765	amino acid transport
FDV79_01205	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
FDV79_01210	COG0355	proton-transporting ATP synthase activity, rotational mechanism
FDV79_01215	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
FDV79_01220	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
FDV79_01225	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
FDV79_01230	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
FDV79_01245	COG0356	it plays a direct role in the translocation of protons across the membrane
FDV79_01250	COG3312	ion transport
FDV79_01255	COG1475	DNA binding
FDV79_01260	COG1192	Involved in chromosome partitioning
FDV79_01265	COG0357	Ribosomal RNA small subunit methyltransferase G
FDV79_01270	COG0445	tRNA wobble uridine modification
FDV79_01275	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
FDV79_01325	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
FDV79_01365	COG4974	Belongs to the 'phage' integrase family
FDV79_01370	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
FDV79_01375	COG0706	membrane insertase activity
FDV79_01385	COG0594	ribonuclease P activity
FDV79_01395	COG1126	abc transporter atp-binding protein
FDV79_01420	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
FDV79_01425	COG0592	DNA-directed DNA polymerase activity
FDV79_01430	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
FDV79_01435	COG0187	DNA topoisomerase II activity
FDV79_01455	COG0071	Belongs to the small heat shock protein (HSP20) family
FDV79_01460	COG3977	Valine--pyruvate aminotransferase
FDV79_01465	COG0366	Alpha amylase catalytic
FDV79_01470	COG0751	glycine-tRNA ligase activity
FDV79_01475	COG0752	glycyl-tRNA synthetase alpha subunit
FDV79_01480	COG2119	membrane
FDV79_01490	COG0425	Belongs to the sulfur carrier protein TusA family
FDV79_01505	COG0604	alcohol dehydrogenase
FDV79_01510	COG0183	Belongs to the thiolase family
FDV79_01515	COG1250	3-hydroxyacyl-CoA dehydrogenase
FDV79_01515	COG1024	Enoyl-CoA hydratase
FDV79_01520	COG1739	Uncharacterized protein family UPF0029
FDV79_01525	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FDV79_01575	COG0583	DNA-binding transcription factor activity
FDV79_01580	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
FDV79_01585	COG2960	long-chain fatty acid transporting porin activity
FDV79_01595	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FDV79_01600	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FDV79_01665	COG4172	Belongs to the ABC transporter superfamily
FDV79_01670	COG0747	negative chemotaxis
FDV79_01680	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FDV79_01720	COG1609	Transcriptional regulator
FDV79_01725	COG0583	DNA-binding transcription factor activity
FDV79_01740	COG0129	dihydroxy-acid dehydratase activity
FDV79_01745	COG3265	gluconokinase activity
FDV79_01750	COG2610	gluconate transmembrane transporter activity
FDV79_01755	COG0800	Aldolase
FDV79_01760	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
FDV79_01765	COG0583	DNA-binding transcription factor activity
FDV79_01770	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FDV79_01775	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
FDV79_01790	COG1522	sequence-specific DNA binding
FDV79_01795	COG5001	Diguanylate cyclase
FDV79_01795	COG5002	protein histidine kinase activity
FDV79_01800	COG0742	ribosomal rna small subunit methyltransferase
FDV79_01815	COG0589	response to stress
FDV79_01820	COG1528	Iron-storage protein
FDV79_01830	COG2081	HI0933 family
FDV79_01840	COG2823	Periplasmic or secreted lipoprotein
FDV79_01860	COG1597	lipid kinase activity
FDV79_01890	COG0628	permease
FDV79_01905	COG1322	Protein conserved in bacteria
FDV79_01910	COG2226	methyltransferase
FDV79_01915	COG3165	ubiquinone biosynthetic process from chorismate
FDV79_01920	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
FDV79_01925	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FDV79_01930	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FDV79_01935	COG0805	protein transport
FDV79_01945	COG0084	hydrolase, TatD family'
FDV79_01970	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FDV79_01970	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FDV79_01980	COG0218	Necessary for normal cell division and for the maintenance of normal septation
FDV79_02015	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
FDV79_02025	COG2204	response regulator
FDV79_02030	COG3852	Histidine kinase
FDV79_02040	COG0174	glutamine synthetase
FDV79_02060	COG1295	ribonuclease BN
FDV79_02065	COG1490	D-aminoacyl-tRNA deacylase activity
FDV79_02070	COG0456	acetyltransferase
FDV79_02080	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
FDV79_02085	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
FDV79_02090	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
FDV79_02095	COG3031	protein transport across the cell outer membrane
FDV79_02105	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FDV79_02110	COG1459	type II secretion system
FDV79_02115	COG2165	general secretion pathway protein
FDV79_02120	COG2165	general secretion pathway protein
FDV79_02125	COG2165	general secretion pathway protein
FDV79_02130	COG4795	General secretion pathway protein
FDV79_02135	COG3156	type II secretion system protein K
FDV79_02140	COG3297	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
FDV79_02145	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
FDV79_02155	COG1218	3'(2'),5'-bisphosphate nucleotidase
FDV79_02160	COG0494	nUDIX hydrolase
FDV79_02165	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
FDV79_02165	COG0316	Belongs to the HesB IscA family
FDV79_02170	COG1040	competence protein
FDV79_02175	COG0596	Alpha beta hydrolase
FDV79_02185	COG2183	response to ionizing radiation
FDV79_02195	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FDV79_02205	COG0745	RESPONSE REGULATOR receiver
FDV79_02210	COG2205	protein histidine kinase activity
FDV79_02215	COG2233	PERMEase
FDV79_02225	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
FDV79_02230	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FDV79_02235	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FDV79_02240	COG1758	RNA polymerase activity
FDV79_02245	COG0194	GDP metabolic process
FDV79_02260	COG0848	biopolymer transport protein
FDV79_02265	COG0811	peptide transport
FDV79_02290	COG4174	ABC transporter (Permease)
FDV79_02295	COG4239	(ABC) transporter, permease
FDV79_02300	COG0747	negative chemotaxis
FDV79_02305	COG0444	Belongs to the ABC transporter superfamily
FDV79_02310	COG4608	Belongs to the ABC transporter superfamily
FDV79_02375	COG2246	polysaccharide biosynthetic process
FDV79_02390	COG1561	YicC-like family, N-terminal region
FDV79_02395	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
FDV79_02400	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
FDV79_02405	COG1560	Kdo2-lipid A biosynthetic process
FDV79_02410	COG1309	transcriptional regulator
FDV79_02415	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
FDV79_02425	COG0840	transmembrane signaling receptor activity
FDV79_02430	COG2003	Belongs to the UPF0758 family
FDV79_02435	COG0227	Belongs to the bacterial ribosomal protein bL28 family
FDV79_02450	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
FDV79_02455	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
FDV79_02470	COG0463	Glycosyl transferase, family 2
FDV79_02475	COG0859	PFAM glycosyl transferase family 9
FDV79_02480	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
FDV79_02485	COG3642	lipopolysaccharide core region biosynthetic process
FDV79_02505	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FDV79_02530	COG0297	glycogen (starch) synthase activity
FDV79_02530	COG0438	transferase activity, transferring glycosyl groups
FDV79_02540	COG1519	Transferase
FDV79_02545	COG0859	PFAM glycosyl transferase family 9
FDV79_02550	COG1560	Kdo2-lipid A biosynthetic process
FDV79_02560	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FDV79_02630	COG1216	Glycosyl transferase, family 2
FDV79_02630	COG1442	glycosyl transferase family 8
FDV79_02640	COG1216	Glycosyl transferase, family 2
FDV79_02665	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FDV79_02680	COG0149	triose-phosphate isomerase activity
FDV79_02705	COG1494	fructose-1,6-bisphosphatase
FDV79_02715	COG3074	FtsZ-dependent cytokinesis
FDV79_02720	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FDV79_02725	COG1575	Belongs to the MenA family. Type 1 subfamily
FDV79_02730	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
FDV79_02735	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
FDV79_02745	COG1609	Transcriptional regulator
FDV79_02750	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
FDV79_02760	COG0254	rRNA binding
FDV79_02770	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
FDV79_02775	COG0088	Forms part of the polypeptide exit tunnel
FDV79_02785	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
FDV79_02790	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
FDV79_02795	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
FDV79_02800	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
FDV79_02810	COG0255	Belongs to the universal ribosomal protein uL29 family
FDV79_02815	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
FDV79_02820	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
FDV79_02825	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
FDV79_02830	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
FDV79_02835	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
FDV79_02840	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
FDV79_02845	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
FDV79_02860	COG1841	ribosomal large subunit assembly
FDV79_02865	COG0200	Binds to the 23S rRNA
FDV79_02870	COG0201	protein transport
FDV79_02875	COG0257	Belongs to the bacterial ribosomal protein bL36 family
FDV79_02880	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
FDV79_02885	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
FDV79_02895	COG0202	RNA polymerase activity
FDV79_02900	COG0203	ribosomal protein L17
FDV79_02910	COG0545	Peptidyl-prolyl cis-trans isomerase
FDV79_02920	COG2153	protein acetylation
FDV79_02925	COG0513	Belongs to the DEAD box helicase family
FDV79_02935	COG0737	Belongs to the 5'-nucleotidase family
FDV79_02940	COG1648	precorrin-2 dehydrogenase activity
FDV79_02940	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
FDV79_02945	COG0175	sulfate reduction
FDV79_02950	COG2895	sulfate adenylyltransferase (ATP) activity
FDV79_02960	COG0471	metal ion transport
FDV79_02960	COG3273	potassium ion transport
FDV79_02965	COG0529	Catalyzes the synthesis of activated sulfate
FDV79_02985	COG4181	ATPase activity
FDV79_03000	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
FDV79_03010	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FDV79_03015	COG0729	surface antigen
FDV79_03025	COG2105	PFAM AIG2 family protein
FDV79_03035	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
FDV79_03040	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
FDV79_03050	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
FDV79_03055	COG0163	prenyltransferase activity
FDV79_03060	COG4143	(ABC) transporter
FDV79_03065	COG1178	ABC-type Fe3 transport system permease component
FDV79_03070	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
FDV79_03090	COG2358	TRAP transporter, solute receptor (TAXI family
FDV79_03105	COG0039	L-malate dehydrogenase activity
FDV79_03115	COG0142	geranyltranstransferase activity
FDV79_03120	COG0261	This protein binds to 23S rRNA in the presence of protein L20
FDV79_03130	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
FDV79_03135	COG2966	Psort location CytoplasmicMembrane, score
FDV79_03150	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FDV79_03160	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
FDV79_03165	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
FDV79_03170	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FDV79_03175	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
FDV79_03180	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
FDV79_03190	COG0066	3-isopropylmalate dehydratase activity
FDV79_03195	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
FDV79_03200	COG0473	3-isopropylmalate dehydrogenase activity
FDV79_03205	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FDV79_03230	COG0583	DNA-binding transcription factor activity
FDV79_03235	COG1022	Amp-dependent synthetase and ligase
FDV79_03240	COG0028	Belongs to the TPP enzyme family
FDV79_03245	COG0440	acetolactate synthase activity
FDV79_03250	COG3706	GGDEF domain
FDV79_03260	COG0469	pyruvate kinase activity
FDV79_03270	COG1349	DNA-binding transcription factor activity
FDV79_03275	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
FDV79_03290	COG5002	protein histidine kinase activity
FDV79_03295	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FDV79_03300	COG3722	fumarate hydratase activity
FDV79_03305	COG0246	Mannitol dehydrogenase
FDV79_03310	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
FDV79_03310	COG2213	PTS system mannitol-specific
FDV79_03345	COG1464	Belongs to the NlpA lipoprotein family
FDV79_03360	COG0358	DNA primase activity
FDV79_03365	COG1610	YqeY-like protein
FDV79_03370	COG0828	Belongs to the bacterial ribosomal protein bS21 family
FDV79_03375	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
FDV79_03380	COG0596	Alpha beta hydrolase
FDV79_03385	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
FDV79_03390	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
FDV79_03395	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
FDV79_03400	COG1968	undecaprenyl-diphosphatase activity
FDV79_03405	COG0617	tRNA 3'-terminal CCA addition
FDV79_03410	COG3267	Type II secretory pathway component ExeA
FDV79_03410	COG3409	Peptidoglycan-binding domain 1 protein
FDV79_03420	COG4991	sh3 domain protein
FDV79_03425	COG0306	phosphate transporter
FDV79_03430	COG1392	Phosphate transport regulator
FDV79_03435	COG3025	triphosphatase activity
FDV79_03450	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
FDV79_03455	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
FDV79_03455	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
FDV79_03460	COG1538	Outer membrane efflux protein
FDV79_03465	COG0494	nUDIX hydrolase
FDV79_03470	COG3151	Protein conserved in bacteria
FDV79_03480	COG3150	esterase
FDV79_03490	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
FDV79_03495	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FDV79_03505	COG3105	Protein conserved in bacteria
FDV79_03515	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
FDV79_03525	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
FDV79_03530	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
FDV79_03535	COG0723	plastoquinol--plastocyanin reductase activity
FDV79_03540	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
FDV79_03545	COG2857	Cytochrome c1
FDV79_03550	COG0625	glutathione transferase activity
FDV79_03555	COG2969	positive regulation of protein catabolic process
FDV79_03560	COG2823	Periplasmic or secreted lipoprotein
FDV79_03565	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
FDV79_03570	COG0792	nuclease activity
FDV79_03580	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
FDV79_03595	COG0275	rRNA processing
FDV79_03600	COG3116	cell division
FDV79_03605	COG0768	penicillin binding
FDV79_03610	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FDV79_03615	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
FDV79_03620	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FDV79_03625	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
FDV79_03630	COG0772	Belongs to the SEDS family
FDV79_03635	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
FDV79_03640	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
FDV79_03645	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
FDV79_03650	COG0849	cell division
FDV79_03655	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
FDV79_03660	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
FDV79_03670	COG0653	protein targeting
FDV79_03675	COG0494	nUDIX hydrolase
FDV79_03680	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
FDV79_03685	COG0505	Belongs to the CarA family
FDV79_03690	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
FDV79_03705	COG0730	response to heat
FDV79_03710	COG0583	DNA-binding transcription factor activity
FDV79_03715	COG2860	membrane
FDV79_03720	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FDV79_03730	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FDV79_03740	COG0493	'glutamate synthase
FDV79_03745	COG0069	glutamate synthase activity
FDV79_03745	COG0070	glutamate synthase
FDV79_03745	COG0067	glutamate synthase
FDV79_03755	COG0070	glutamate synthase
FDV79_03755	COG0069	glutamate synthase activity
FDV79_03755	COG0067	glutamate synthase
FDV79_03760	COG1242	4 iron, 4 sulfur cluster binding
FDV79_03765	COG5001	Diguanylate cyclase
FDV79_03765	COG4251	negative regulation of phosphorylation
FDV79_03765	COG3706	GGDEF domain
FDV79_03765	COG2203	Gaf domain
FDV79_03770	COG0784	Response regulator, receiver
FDV79_03770	COG2198	Histidine kinase
FDV79_03770	COG5002	protein histidine kinase activity
FDV79_03780	COG0745	RESPONSE REGULATOR receiver
FDV79_03795	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FDV79_03810	COG0083	homoserine kinase activity
FDV79_03815	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
FDV79_03820	COG3445	Acts as a radical domain for damaged PFL and possibly other radical proteins
FDV79_03825	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
FDV79_03835	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
FDV79_03850	COG1115	amino acid carrier protein
FDV79_03855	COG3022	response to hydroperoxide
FDV79_03860	COG0513	Belongs to the DEAD box helicase family
FDV79_03865	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
FDV79_03875	COG0716	FMN binding
FDV79_03880	COG4974	Belongs to the 'phage' integrase family
FDV79_03885	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FDV79_03890	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
FDV79_03900	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
FDV79_03915	COG0667	Aldo Keto reductase
FDV79_03925	COG3066	DNA modification
FDV79_03935	COG0494	nUDIX hydrolase
FDV79_03945	COG0730	response to heat
FDV79_03950	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
FDV79_03955	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
FDV79_03965	COG1283	sodium-dependent phosphate transmembrane transporter activity
FDV79_03970	COG0583	DNA-binding transcription factor activity
FDV79_03980	COG0640	Transcriptional regulator
FDV79_03990	COG0268	Binds directly to 16S ribosomal RNA
FDV79_03995	COG0728	peptidoglycan biosynthetic process
FDV79_04000	COG0196	riboflavin kinase activity
FDV79_04005	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
FDV79_04010	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
FDV79_04015	COG1047	Peptidyl-prolyl cis-trans
FDV79_04020	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
FDV79_04025	COG3279	Response regulator of the LytR AlgR family
FDV79_04030	COG3275	phosphorelay sensor kinase activity
FDV79_04035	COG1966	Carbon starvation protein
FDV79_04050	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
FDV79_04055	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
FDV79_04060	COG1472	Belongs to the glycosyl hydrolase 3 family
FDV79_04065	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FDV79_04070	COG1605	Chorismate mutase
FDV79_04070	COG0287	Prephenate dehydrogenase
FDV79_04075	COG0739	heme binding
FDV79_04090	COG0488	(ABC) transporter
FDV79_04100	COG2973	This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region
FDV79_04105	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
FDV79_04110	COG1605	Chorismate mutase
FDV79_04110	COG0077	Prephenate dehydratase
FDV79_04115	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
FDV79_04120	COG0741	lytic transglycosylase activity
FDV79_04125	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FDV79_04130	COG0564	pseudouridine synthase activity
FDV79_04140	COG0542	response to heat
FDV79_04200	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FDV79_04210	COG2974	May be involved in recombination
FDV79_04220	COG0745	RESPONSE REGULATOR receiver
FDV79_04225	COG5002	protein histidine kinase activity
FDV79_04235	COG0248	Ppx GppA phosphatase
FDV79_04240	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
FDV79_04245	COG0573	inorganic phosphate transmembrane transporter activity
FDV79_04250	COG0581	inorganic phosphate transmembrane transporter activity
FDV79_04255	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
FDV79_04260	COG0704	Plays a role in the regulation of phosphate uptake
FDV79_04270	COG3142	Participates in the control of copper homeostasis
FDV79_04280	COG0450	alkyl hydroperoxide reductase
FDV79_04285	COG0583	DNA-binding transcription factor activity
FDV79_04295	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
FDV79_04305	COG0517	IMP dehydrogenase activity
FDV79_04320	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
FDV79_04325	COG0343	queuine tRNA-ribosyltransferase activity
FDV79_04330	COG1862	Preprotein translocase
FDV79_04335	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FDV79_04340	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FDV79_04350	COG0483	inositol monophosphate 1-phosphatase activity
FDV79_04365	COG1104	cysteine desulfurase activity
FDV79_04370	COG0822	iron-sulfur transferase activity
FDV79_04380	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
FDV79_04385	COG0443	Heat shock 70 kDa protein
FDV79_04390	COG0633	Ferredoxin
FDV79_04395	COG2975	iron-sulfur cluster assembly
FDV79_04400	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
FDV79_04405	COG0105	UTP biosynthetic process
FDV79_04410	COG0820	rRNA (adenine-C2-)-methyltransferase activity
FDV79_04425	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
FDV79_04430	COG0124	histidyl-tRNA synthetase
FDV79_04435	COG2976	Protein conserved in bacteria
FDV79_04440	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FDV79_04445	COG1160	GTP binding
FDV79_04460	COG1570	exodeoxyribonuclease VII activity
FDV79_04465	COG0517	IMP dehydrogenase activity
FDV79_04465	COG0516	GMP reductase activity
FDV79_04470	COG0519	Catalyzes the synthesis of GMP from XMP
FDV79_04470	COG0518	GMP synthase (glutamine-hydrolyzing) activity
FDV79_04475	COG1757	Na H antiporter
FDV79_04485	COG1584	GPR1 FUN34 yaaH family protein
FDV79_04495	COG1115	amino acid carrier protein
FDV79_04535	COG2873	o-acetylhomoserine
FDV79_04540	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FDV79_04560	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FDV79_04560	COG3153	acetyltransferase
FDV79_04565	COG0583	DNA-binding transcription factor activity
FDV79_04615	COG2003	Belongs to the UPF0758 family
FDV79_04640	COG1715	Restriction endonuclease
FDV79_04665	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
FDV79_04675	COG0582	viral genome integration into host DNA
FDV79_04685	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
FDV79_04690	COG2867	negative regulation of translational initiation
FDV79_04695	COG2914	Belongs to the UPF0125 (RnfH) family
FDV79_04700	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FDV79_04705	COG0497	DNA recombination
FDV79_04715	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
FDV79_04720	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
FDV79_04730	COG0443	Heat shock 70 kDa protein
FDV79_04735	COG0484	heat shock protein binding
FDV79_04775	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
FDV79_04790	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
FDV79_04795	COG0047	phosphoribosylformylglycinamidine synthase activity
FDV79_04795	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
FDV79_04820	COG2195	Cleaves the N-terminal amino acid of tripeptides
FDV79_04825	COG2252	PERMEase
FDV79_04830	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
FDV79_04845	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
FDV79_04850	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
FDV79_04855	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
FDV79_04860	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FDV79_04860	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FDV79_04880	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FDV79_04885	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
FDV79_04890	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
FDV79_04895	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
FDV79_04900	COG0142	geranyltranstransferase activity
FDV79_04905	COG1722	exodeoxyribonuclease VII activity
FDV79_04910	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
FDV79_04915	COG2885	chlorophyll binding
FDV79_04920	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FDV79_04920	COG0301	tRNA thio-modification
FDV79_04925	COG0583	DNA-binding transcription factor activity
FDV79_04935	COG2363	Small membrane protein
FDV79_04940	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
FDV79_04950	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FDV79_04955	COG1611	Belongs to the LOG family
FDV79_04970	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
FDV79_04970	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
FDV79_04980	COG5595	Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310)
FDV79_04985	COG1464	Belongs to the NlpA lipoprotein family
FDV79_04990	COG2011	ABC-type metal ion transport system permease component
FDV79_04995	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FDV79_05005	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
FDV79_05015	COG1263	PTS System
FDV79_05015	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FDV79_05020	COG0366	Alpha amylase catalytic
FDV79_05035	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FDV79_05040	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
FDV79_05045	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
FDV79_05050	COG0321	lipoyl(octanoyl) transferase activity
FDV79_05055	COG2921	Belongs to the UPF0250 family
FDV79_05060	COG1686	Belongs to the peptidase S11 family
FDV79_05065	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
FDV79_05070	COG0772	Belongs to the SEDS family
FDV79_05075	COG0768	penicillin binding
FDV79_05080	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
FDV79_05085	COG0799	negative regulation of ribosome biogenesis
FDV79_05090	COG1466	dna polymerase III delta subunit
FDV79_05095	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
FDV79_05100	COG0495	leucyl-tRNA aminoacylation
FDV79_05105	COG2888	peptidyl-tyrosine sulfation
FDV79_05110	COG0815	Transfers the fatty acyl group on membrane lipoproteins
FDV79_05115	COG4535	Mg2 and Co2 transporter CorC
FDV79_05120	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
FDV79_05125	COG1702	phosphate starvation-inducible protein PhoH
FDV79_05130	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
FDV79_05140	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FDV79_05255	COG0012	GTP binding
FDV79_05260	COG0193	aminoacyl-tRNA hydrolase activity
FDV79_05265	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
FDV79_05270	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
FDV79_05275	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
FDV79_05280	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
FDV79_05285	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
FDV79_05290	COG2890	protein-(glutamine-N5) methyltransferase activity
FDV79_05295	COG3094	Invasion gene expression up-regulator, SirB
FDV79_05300	COG2912	Transglutaminase-like superfamily
FDV79_05305	COG2877	3-deoxy-8-phosphooctulonate synthase activity
FDV79_05310	COG0737	Belongs to the 5'-nucleotidase family
FDV79_05320	COG1187	pseudouridine synthase activity
FDV79_05325	COG2840	Smr protein MutS2
FDV79_05365	COG2217	Heavy metal translocating P-type atpase
FDV79_05365	COG2608	mercury ion transmembrane transporter activity
FDV79_05380	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
FDV79_05385	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FDV79_05445	COG0784	Response regulator, receiver
FDV79_05445	COG0835	chemotaxis
FDV79_05450	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
FDV79_05455	COG1815	bacterial-type flagellum-dependent cell motility
FDV79_05460	COG1558	bacterial-type flagellum-dependent cell motility
FDV79_05470	COG1749	Flagellar hook protein flgE
FDV79_05480	COG4787	bacterial-type flagellum-dependent cell motility
FDV79_05490	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
FDV79_05495	COG1706	bacterial-type flagellum-dependent cell motility
FDV79_05500	COG3951	Flagellar rod assembly protein muramidase FlgJ
FDV79_05500	COG1705	Flagellar rod assembly protein muramidase FlgJ
FDV79_05510	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FDV79_05520	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FDV79_05530	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FDV79_05535	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FDV79_05545	COG2190	(PTS) system
FDV79_05550	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FDV79_05555	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FDV79_05565	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FDV79_05570	COG2981	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
FDV79_05575	COG3115	cell septum assembly
FDV79_05580	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
FDV79_05605	COG0330	HflC and HflK could
FDV79_05610	COG3118	belongs to the thioredoxin family
FDV79_05620	COG0300	oxidoreductase activity
FDV79_05625	COG1090	epimerase
FDV79_05655	COG0622	Phosphoesterase
FDV79_05675	COG3710	Transcriptional regulator
FDV79_05680	COG0326	Molecular chaperone. Has ATPase activity
FDV79_05685	COG0563	adenylate kinase activity
FDV79_05690	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
FDV79_05695	COG3104	oligopeptide transport
FDV79_05700	COG0250	Participates in transcription elongation, termination and antitermination
FDV79_05705	COG0367	asparagine synthase
FDV79_05710	COG4651	solute:proton antiporter activity
FDV79_05710	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FDV79_05715	COG1940	carbohydrate kinase activity
FDV79_05715	COG1846	Transcriptional regulator
FDV79_05720	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
FDV79_05730	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FDV79_05730	COG1263	PTS System
FDV79_05735	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FDV79_05740	COG0735	belongs to the Fur family
FDV79_05760	COG0596	Alpha beta hydrolase
FDV79_05765	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
FDV79_05770	COG0033	Phosphoglucomutase
FDV79_05780	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
FDV79_05795	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
FDV79_05800	COG1053	succinate dehydrogenase
FDV79_05805	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
FDV79_05810	COG0567	Dehydrogenase, E1 component
FDV79_05815	COG0508	dehydrogenase complex catalyzes the overall conversion of
FDV79_05820	COG0045	succinate-CoA ligase (ADP-forming) activity
FDV79_05830	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FDV79_05835	COG1121	(ABC) transporter
FDV79_05840	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
FDV79_05845	COG4977	sequence-specific DNA binding
FDV79_05860	COG1918	ferrous iron import across plasma membrane
FDV79_05880	COG0018	arginyl-trna synthetase
FDV79_05890	COG3102	Protein conserved in bacteria
FDV79_05895	COG0788	formyltetrahydrofolate deformylase activity
FDV79_05900	COG1199	ATP-dependent helicase activity
FDV79_05905	COG1214	PFAM Peptidase M22, glycoprotease
FDV79_05920	COG2267	carboxylic ester hydrolase activity
FDV79_05925	COG0318	PFAM AMP-dependent synthetase and ligase
FDV79_05930	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
FDV79_05935	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
FDV79_05940	COG2894	cell division
FDV79_05945	COG0850	regulation of cytokinetic process
FDV79_05950	COG3100	YcgL domain-containing protein
FDV79_05955	COG2951	lytic endotransglycosylase activity
FDV79_05960	COG0583	DNA-binding transcription factor activity
FDV79_05965	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FDV79_05970	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
FDV79_05990	COG1028	Short-chain dehydrogenase reductase Sdr
FDV79_06000	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FDV79_06025	COG2986	histidine ammonia-lyase
FDV79_06030	COG1216	Glycosyl transferase, family 2
FDV79_06035	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
FDV79_06050	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FDV79_06055	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FDV79_06090	COG1253	flavin adenine dinucleotide binding
FDV79_06095	COG0513	Belongs to the DEAD box helicase family
FDV79_06100	COG0569	domain protein
FDV79_06105	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FDV79_06120	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
FDV79_06125	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FDV79_06130	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
FDV79_06135	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FDV79_06145	COG2204	response regulator
FDV79_06155	COG0544	peptidyl-prolyl cis-trans isomerase activity
FDV79_06165	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
FDV79_06170	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
FDV79_06175	COG0776	regulation of translation
FDV79_06180	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FDV79_06185	COG1555	photosystem II stabilization
FDV79_06200	COG0232	Belongs to the dGTPase family. Type 2 subfamily
FDV79_06205	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
FDV79_06210	COG0436	Aminotransferase
FDV79_06215	COG1169	isochorismate synthase
FDV79_06220	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
FDV79_06225	COG0596	Alpha beta hydrolase
FDV79_06230	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
FDV79_06250	COG2855	membrane
FDV79_06255	COG0477	Major facilitator Superfamily
FDV79_06305	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FDV79_06335	COG1522	sequence-specific DNA binding
FDV79_06345	COG1946	Acyl-CoA thioesterase
FDV79_06350	COG3126	Type III secretion system lipoprotein chaperone (YscW)
FDV79_06365	COG2199	diguanylate cyclase activity
FDV79_06375	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FDV79_06380	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
FDV79_06385	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
FDV79_06395	COG0517	IMP dehydrogenase activity
FDV79_06395	COG0516	GMP reductase activity
FDV79_06425	COG0537	adenosine 5'-monophosphoramidase activity
FDV79_06450	COG3150	esterase
FDV79_06460	COG1252	NADH dehydrogenase
FDV79_06475	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
FDV79_06485	COG4591	ABC-type transport system involved in lipoprotein release permease component
FDV79_06490	COG1136	(ABC) transporter
FDV79_06495	COG4591	ABC-type transport system involved in lipoprotein release permease component
FDV79_06505	COG0658	competence protein
FDV79_06505	COG2333	competence protein COMEC
FDV79_06510	COG1132	(ABC) transporter
FDV79_06515	COG1663	tetraacyldisaccharide 4'-kinase activity
FDV79_06525	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
FDV79_06530	COG2719	SpoVR family
FDV79_06535	COG2718	Belongs to the UPF0229 family
FDV79_06540	COG2766	serine protein kinase
FDV79_06550	COG3013	Belongs to the UPF0304 family
FDV79_06560	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FDV79_06570	COG1882	Formate acetyltransferase
FDV79_06615	COG0708	Exodeoxyribonuclease III
FDV79_06625	COG3923	Primosomal replication protein n
FDV79_06630	COG0730	response to heat
FDV79_06635	COG1199	ATP-dependent helicase activity
FDV79_06645	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
FDV79_06650	COG1187	pseudouridine synthase activity
FDV79_06660	COG1278	Cold shock
FDV79_06665	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
FDV79_06670	COG0542	response to heat
FDV79_06680	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
FDV79_06685	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
FDV79_06690	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
FDV79_06700	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
FDV79_06710	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FDV79_06715	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
FDV79_06720	COG0297	glycogen (starch) synthase activity
FDV79_06740	COG3070	regulator of competence-specific genes
FDV79_06745	COG1609	Transcriptional regulator
FDV79_06750	COG3381	protein complex oligomerization
FDV79_06755	COG0745	RESPONSE REGULATOR receiver
FDV79_06760	COG1434	Gram-negative-bacterium-type cell wall biogenesis
FDV79_06765	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FDV79_06770	COG3006	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity
FDV79_06775	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
FDV79_06780	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
FDV79_06800	COG4067	protein conserved in archaea
FDV79_06800	COG0189	ligase activity
FDV79_06810	COG0500	methyltransferase
FDV79_06815	COG4106	trans-aconitate 2-methyltransferase activity
FDV79_06820	COG1801	Protein of unknown function DUF72
FDV79_06825	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
FDV79_06830	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
FDV79_06835	COG0840	transmembrane signaling receptor activity
FDV79_06840	COG0632	four-way junction helicase activity
FDV79_06845	COG2255	four-way junction helicase activity
FDV79_06850	COG1271	oxidase subunit
FDV79_06855	COG1294	oxidase, subunit
FDV79_06860	COG4890	Cyd operon protein YbgT
FDV79_06870	COG0824	Thioesterase
FDV79_06875	COG0811	peptide transport
FDV79_06890	COG0823	Involved in the tonB-independent uptake of proteins
FDV79_06895	COG2885	chlorophyll binding
FDV79_06900	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
FDV79_06905	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
FDV79_06915	COG3766	membrane
FDV79_06925	COG0754	glutathionylspermidine amidase activity
FDV79_06935	COG5002	protein histidine kinase activity
FDV79_06935	COG0784	Response regulator, receiver
FDV79_06950	COG0840	transmembrane signaling receptor activity
FDV79_06965	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FDV79_06970	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FDV79_07000	COG3568	Endonuclease Exonuclease Phosphatase
FDV79_07015	COG0583	DNA-binding transcription factor activity
FDV79_07025	COG0686	Belongs to the AlaDH PNT family
FDV79_07035	COG1674	ftsk spoiiie
FDV79_07040	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
FDV79_07045	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
FDV79_07050	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
FDV79_07065	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
FDV79_07075	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
FDV79_07080	COG0156	8-amino-7-oxononanoate synthase activity
FDV79_07090	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
FDV79_07100	COG0501	Belongs to the peptidase M48B family
FDV79_07110	COG0300	oxidoreductase activity
FDV79_07125	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FDV79_07150	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
FDV79_07155	COG2915	High frequency lysogenization protein hflD homolog
FDV79_07160	COG0482	sulfurtransferase activity
FDV79_07170	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FDV79_07180	COG1757	Na H antiporter
FDV79_07195	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
FDV79_07200	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
FDV79_07205	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FDV79_07210	COG0131	Imidazoleglycerol-phosphate dehydratase
FDV79_07210	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
FDV79_07215	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
FDV79_07220	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
FDV79_07225	COG0107	imidazoleglycerol-phosphate synthase activity
FDV79_07230	COG0140	phosphoribosyl-ATP diphosphatase activity
FDV79_07230	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
FDV79_07235	COG3012	SEC-C Motif Domain Protein
FDV79_07245	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
FDV79_07250	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FDV79_07255	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
FDV79_07260	COG0215	cysteine-tRNA ligase activity
FDV79_07265	COG1435	thymidine kinase activity
FDV79_07270	COG1434	Gram-negative-bacterium-type cell wall biogenesis
FDV79_07295	COG2116	formate transmembrane transporter activity
FDV79_07305	COG0390	transport system, permease component
FDV79_07310	COG4459	periplasmic nitrate reductase
FDV79_07315	COG3005	denitrification pathway
FDV79_07320	COG0243	molybdopterin cofactor binding
FDV79_07335	COG1227	inorganic diphosphatase activity
FDV79_07345	COG4172	Belongs to the ABC transporter superfamily
FDV79_07355	COG4171	peptide transport system, permease
FDV79_07370	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
FDV79_07375	COG1842	Phage shock protein A
FDV79_07385	COG1983	PspC domain protein
FDV79_07390	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FDV79_07405	COG2818	Glycosylase
FDV79_07410	COG5380	lipid catabolic process
FDV79_07415	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
FDV79_07420	COG0626	cystathionine gamma-synthase activity
FDV79_07430	COG0733	neurotransmitter:sodium symporter activity
FDV79_07440	COG0564	pseudouridine synthase activity
FDV79_07450	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FDV79_07455	COG1151	hydroxylamine reductase activity
FDV79_07460	COG3604	Transcriptional regulator
FDV79_07475	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FDV79_07480	COG4136	ATPase activity
FDV79_07485	COG4135	transport system, permease component
FDV79_07490	COG4134	Bacterial extracellular solute-binding protein
FDV79_07495	COG0398	Pfam SNARE associated Golgi protein
FDV79_07505	COG0493	'glutamate synthase
FDV79_07530	COG3313	Fe-S protein
FDV79_07545	COG0737	Belongs to the 5'-nucleotidase family
FDV79_07560	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
FDV79_07565	COG2205	protein histidine kinase activity
FDV79_07570	COG0745	RESPONSE REGULATOR receiver
FDV79_07580	COG1061	Type III restriction enzyme res subunit
FDV79_07585	COG1187	pseudouridine synthase activity
FDV79_07590	COG2814	Major facilitator Superfamily
FDV79_07620	COG3005	denitrification pathway
FDV79_07625	COG0702	epimerase
FDV79_07630	COG0534	Mate efflux family protein
FDV79_07635	COG4181	ATPase activity
FDV79_07650	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
FDV79_07665	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
FDV79_07670	COG3273	potassium ion transport
FDV79_07670	COG2985	domain, Protein
FDV79_07675	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FDV79_07690	COG1737	Transcriptional regulator
FDV79_07695	COG0076	glutamate decarboxylase activity
FDV79_07705	COG2431	L-lysine efflux transmembrane transporter activity
FDV79_07725	COG3070	regulator of competence-specific genes
FDV79_07740	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FDV79_07740	COG4191	Histidine kinase
FDV79_07750	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
FDV79_07755	COG3048	D-serine ammonia-lyase activity
FDV79_07760	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
FDV79_07765	COG4988	ABC transporter
FDV79_07770	COG0492	ferredoxin-NADP+ reductase activity
FDV79_07795	COG0471	metal ion transport
FDV79_07800	COG2949	membrane
FDV79_07805	COG0281	malic enzyme
FDV79_07810	COG1643	Atp-dependent helicase
FDV79_07815	COG2829	1-acyl-2-lysophosphatidylserine acylhydrolase activity
FDV79_07830	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
FDV79_07865	COG0277	FAD linked oxidase domain protein
FDV79_07865	COG0247	lactate metabolic process
FDV79_07880	COG2986	histidine ammonia-lyase
FDV79_07885	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
FDV79_07890	COG0010	Belongs to the arginase family
FDV79_07895	COG1228	amidohydrolase
FDV79_07900	COG2188	Transcriptional regulator
FDV79_07915	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
FDV79_07925	COG0291	Belongs to the bacterial ribosomal protein bL35 family
FDV79_07935	COG0393	Putative heavy-metal-binding
FDV79_07965	COG3706	GGDEF domain
FDV79_07970	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
FDV79_07975	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FDV79_07975	COG0072	phenylalanine-tRNA ligase activity
FDV79_07990	COG0776	regulation of translation
FDV79_08000	COG0500	methyltransferase
FDV79_08005	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
FDV79_08010	COG0295	cytidine deaminase activity
FDV79_08015	COG1346	cytolysis
FDV79_08020	COG1380	Effector of murein hydrolase LrgA
FDV79_08025	COG2925	Exonuclease
FDV79_08035	COG0702	epimerase
FDV79_08040	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
FDV79_08045	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
FDV79_08070	COG2988	succinylglutamate desuccinylase activity
FDV79_08075	COG4139	cobalamin transport
FDV79_08080	COG4138	Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system
FDV79_08100	COG0583	DNA-binding transcription factor activity
FDV79_08120	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
FDV79_08125	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FDV79_08130	COG3475	LICD family
FDV79_08135	COG1451	nucleotide metabolic process
FDV79_08140	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
FDV79_08170	COG3938	Belongs to the proline racemase family
FDV79_08190	COG2423	ornithine cyclodeaminase activity
FDV79_08195	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FDV79_08200	COG3842	ATPase activity
FDV79_08205	COG1176	ABC-type spermidine putrescine transport system, permease component I
FDV79_08210	COG1177	transmembrane transport
FDV79_08225	COG3291	Pkd domain containing protein
FDV79_08245	COG0444	Belongs to the ABC transporter superfamily
FDV79_08250	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FDV79_08255	COG0601	transmembrane transport
FDV79_08265	COG2195	Cleaves the N-terminal amino acid of tripeptides
FDV79_08280	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
FDV79_08290	COG0625	glutathione transferase activity
FDV79_08350	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
FDV79_08355	COG0583	DNA-binding transcription factor activity
FDV79_08385	COG0471	metal ion transport
FDV79_08390	COG4191	Histidine kinase
FDV79_08390	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FDV79_08400	COG3300	MHYT domain
FDV79_08400	COG5001	Diguanylate cyclase
FDV79_08410	COG1280	lysine exporter protein (LysE YggA)
FDV79_08415	COG1328	CTP reductase activity
FDV79_08420	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FDV79_08430	COG0861	Integral membrane protein TerC family
FDV79_08440	COG0739	heme binding
FDV79_08465	COG2204	response regulator
FDV79_08480	COG3501	Rhs element vgr protein
FDV79_08505	COG0515	serine threonine protein kinase
FDV79_08540	COG1522	sequence-specific DNA binding
FDV79_08615	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
FDV79_08630	COG0814	amino acid
FDV79_08655	COG1132	(ABC) transporter
FDV79_08660	COG1132	(ABC) transporter
FDV79_08690	COG0443	Heat shock 70 kDa protein
FDV79_08695	COG0443	Heat shock 70 kDa protein
FDV79_08705	COG3706	GGDEF domain
FDV79_08735	COG0243	molybdopterin cofactor binding
FDV79_08740	COG0437	4 iron, 4 sulfur cluster binding
FDV79_08745	COG3302	dmso reductase anchor subunit
FDV79_08755	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FDV79_08755	COG2221	Nitrite and sulphite reductase 4Fe-4S
FDV79_08760	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
FDV79_08765	COG1643	Atp-dependent helicase
FDV79_08780	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FDV79_08790	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FDV79_08795	COG1215	transferase activity, transferring glycosyl groups
FDV79_08800	COG0438	transferase activity, transferring glycosyl groups
FDV79_08835	COG0438	transferase activity, transferring glycosyl groups
FDV79_08845	COG2204	response regulator
FDV79_08880	COG1793	dna ligase
FDV79_08890	COG0534	Mate efflux family protein
FDV79_08895	COG0307	riboflavin synthase, alpha
FDV79_08905	COG3001	Fructosamine kinase
FDV79_08910	COG2201	protein-glutamate methylesterase activity
FDV79_08915	COG3706	GGDEF domain
FDV79_08925	COG0791	NLP P60 protein
FDV79_08930	COG0840	transmembrane signaling receptor activity
FDV79_08970	COG1940	carbohydrate kinase activity
FDV79_08980	COG0303	'Molybdopterin
FDV79_08985	COG0746	molybdenum cofactor guanylyltransferase activity
FDV79_08990	COG3842	ATPase activity
FDV79_09010	COG2204	response regulator
FDV79_09015	COG4191	Histidine kinase
FDV79_09025	COG0488	(ABC) transporter
FDV79_09030	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
FDV79_09055	COG3381	protein complex oligomerization
FDV79_09065	COG0243	molybdopterin cofactor binding
FDV79_09065	COG3383	formate dehydrogenase (NAD+) activity
FDV79_09070	COG0437	4 iron, 4 sulfur cluster binding
FDV79_09085	COG3209	COG3209 Rhs family protein
FDV79_09135	COG0004	ammonium transporteR
FDV79_09145	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
FDV79_09150	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FDV79_09160	COG1177	transmembrane transport
FDV79_09170	COG3842	ATPase activity
FDV79_09190	COG0037	tRNA processing
FDV79_09200	COG0589	response to stress
FDV79_09205	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FDV79_09220	COG2217	Heavy metal translocating P-type atpase
FDV79_09230	COG2010	Cytochrome c
FDV79_09245	COG3278	Belongs to the heme-copper respiratory oxidase family
FDV79_09260	COG2205	protein histidine kinase activity
FDV79_09260	COG0784	Response regulator, receiver
FDV79_09405	COG3120	sequence-specific DNA binding
FDV79_09410	COG1067	ATP-dependent peptidase activity
FDV79_09415	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
FDV79_09440	COG0116	Belongs to the methyltransferase superfamily
FDV79_09440	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
FDV79_09455	COG0167	dihydroorotate dehydrogenase activity
FDV79_09470	COG0308	aminopeptidase N
FDV79_09485	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
FDV79_09490	COG1956	GAF domain-containing protein
FDV79_09495	COG1132	(ABC) transporter
FDV79_09500	COG2995	paraquat-inducible protein a
FDV79_09520	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FDV79_09520	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
FDV79_09540	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FDV79_09545	COG1666	GTP binding
FDV79_09565	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FDV79_09570	COG4597	amino acid ABC transporter
FDV79_09575	COG0765	amino acid transport
FDV79_09580	COG1126	abc transporter atp-binding protein
FDV79_09585	COG0670	Belongs to the BI1 family
FDV79_09595	COG2920	part of a sulfur-relay system
FDV79_09600	COG1254	Belongs to the acylphosphatase family
FDV79_09605	COG0840	transmembrane signaling receptor activity
FDV79_09610	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
FDV79_09650	COG3706	GGDEF domain
FDV79_09655	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
FDV79_09660	COG0602	queuosine metabolic process
FDV79_09665	COG0561	phosphatase activity
FDV79_09690	COG2828	Protein conserved in bacteria
FDV79_09700	COG0372	Belongs to the citrate synthase family
FDV79_09705	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
FDV79_09735	COG0730	response to heat
FDV79_09755	COG0457	Tetratricopeptide repeat
FDV79_09825	COG4790	Type iii secretion
FDV79_09830	COG4794	Type iii secretion
FDV79_09835	COG4791	protein targeting
FDV79_09840	COG4792	protein secretion
FDV79_09850	COG1073	alpha beta
FDV79_09855	COG1073	alpha beta
FDV79_09895	COG3177	Filamentation induced by cAMP protein fic
FDV79_09915	COG4669	(LipO)protein
FDV79_09985	COG1012	belongs to the aldehyde dehydrogenase family
FDV79_09990	COG3284	Transcriptional regulator
FDV79_10015	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
FDV79_10020	COG0363	glucosamine-6-phosphate deaminase activity
FDV79_10025	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
FDV79_10030	COG4565	transcriptional regulatory protein
FDV79_10035	COG3290	protein histidine kinase activity
FDV79_10050	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FDV79_10065	COG1858	cytochrome C peroxidase
FDV79_10070	COG0527	aspartate kinase activity
FDV79_10075	COG0662	Cupin 2, conserved barrel domain protein
FDV79_10080	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FDV79_10085	COG0456	acetyltransferase
FDV79_10090	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FDV79_10110	COG4176	ABC-type proline glycine betaine transport system permease component
FDV79_10115	COG2113	Glycine betaine
FDV79_10135	COG1028	Short-chain dehydrogenase reductase Sdr
FDV79_10145	COG0745	RESPONSE REGULATOR receiver
FDV79_10150	COG0642	Histidine kinase
FDV79_10155	COG1368	sulfuric ester hydrolase activity
FDV79_10180	COG1115	amino acid carrier protein
FDV79_10190	COG1280	lysine exporter protein (LysE YggA)
FDV79_10195	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
FDV79_10200	COG1560	Kdo2-lipid A biosynthetic process
FDV79_10210	COG0531	amino acid
FDV79_10225	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
FDV79_10230	COG3063	Type IV pilus biogenesis stability protein PilW
FDV79_10260	COG0110	maltose O-acetyltransferase activity
FDV79_10280	COG2315	Protein conserved in bacteria
FDV79_10285	COG1846	Transcriptional regulator
FDV79_10300	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
FDV79_10315	COG2200	EAL domain
FDV79_10315	COG2771	luxR family
FDV79_10325	COG1227	inorganic diphosphatase activity
FDV79_10330	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FDV79_10335	COG1012	belongs to the aldehyde dehydrogenase family
FDV79_10340	COG2957	Belongs to the agmatine deiminase family
FDV79_10350	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FDV79_10355	COG1012	belongs to the aldehyde dehydrogenase family
FDV79_10360	COG1917	Cupin 2, conserved barrel domain protein
FDV79_10360	COG1396	sequence-specific DNA binding
FDV79_10365	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
FDV79_10375	COG0174	glutamine synthetase
FDV79_10380	COG1757	Na H antiporter
FDV79_10405	COG1280	lysine exporter protein (LysE YggA)
FDV79_10430	COG2801	Transposase and inactivated derivatives
FDV79_10480	COG2801	Transposase and inactivated derivatives
FDV79_10495	COG2801	Transposase and inactivated derivatives
FDV79_10515	COG2801	Transposase and inactivated derivatives
FDV79_10550	COG2801	Transposase and inactivated derivatives
FDV79_10630	COG2801	Transposase and inactivated derivatives
FDV79_10700	COG2801	Transposase and inactivated derivatives
FDV79_10750	COG2801	Transposase and inactivated derivatives
FDV79_10815	COG2801	Transposase and inactivated derivatives
FDV79_10830	COG0346	lactoylglutathione lyase activity
FDV79_10835	COG2801	Transposase and inactivated derivatives
FDV79_10870	COG2801	Transposase and inactivated derivatives
FDV79_10990	COG2801	Transposase and inactivated derivatives
FDV79_11050	COG2801	Transposase and inactivated derivatives
FDV79_11115	COG2801	Transposase and inactivated derivatives
FDV79_11150	COG0456	acetyltransferase
FDV79_11180	COG0328	RNA-DNA hybrid ribonuclease activity
FDV79_11315	COG2801	Transposase and inactivated derivatives
FDV79_11355	COG2801	Transposase and inactivated derivatives
FDV79_11470	COG0653	protein targeting
FDV79_11495	COG2801	Transposase and inactivated derivatives
FDV79_11605	COG2801	Transposase and inactivated derivatives
FDV79_11680	COG2801	Transposase and inactivated derivatives
FDV79_11725	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FDV79_11735	COG3768	UPF0283 membrane protein
FDV79_11740	COG3106	COG3106 Predicted ATPase
FDV79_11760	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FDV79_11765	COG2205	protein histidine kinase activity
FDV79_11765	COG0784	Response regulator, receiver
FDV79_11775	COG0494	nUDIX hydrolase
FDV79_11780	COG0814	amino acid
FDV79_11785	COG1760	l-serine dehydratase
FDV79_11790	COG2200	EAL domain
FDV79_11800	COG0720	synthase
FDV79_11830	COG1278	Cold shock
FDV79_11835	COG0557	exoribonuclease II activity
FDV79_11850	COG0840	transmembrane signaling receptor activity
FDV79_11855	COG0017	Asparaginyl-tRNA synthetase
FDV79_11865	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FDV79_11890	COG1448	Aminotransferase
FDV79_11910	COG0840	transmembrane signaling receptor activity
FDV79_11915	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FDV79_11920	COG1846	Transcriptional regulator
FDV79_11945	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FDV79_11960	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FDV79_11965	COG3108	Peptidase M15
FDV79_11970	COG2989	Protein conserved in bacteria
FDV79_11995	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
FDV79_12005	COG4235	cytochrome complex assembly
FDV79_12005	COG3088	subunit of a heme lyase
FDV79_12015	COG1138	Cytochrome C-type biogenesis protein
FDV79_12020	COG3301	Polysulphide reductase, NrfD
FDV79_12025	COG0437	4 iron, 4 sulfur cluster binding
FDV79_12035	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
FDV79_12055	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FDV79_12060	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FDV79_12065	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FDV79_12090	COG0019	diaminopimelate decarboxylase activity
FDV79_12130	COG0322	excinuclease ABC activity
FDV79_12135	COG2197	response regulator
FDV79_12140	COG0417	DNA replication proofreading
FDV79_12150	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
FDV79_12155	COG3099	Belongs to the UPF0263 family
FDV79_12165	COG1187	pseudouridine synthase activity
FDV79_12175	COG0009	L-threonylcarbamoyladenylate synthase
FDV79_12180	COG0613	PHP domain protein
FDV79_12190	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FDV79_12195	COG0512	Glutamine amidotransferase of anthranilate synthase
FDV79_12200	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FDV79_12205	COG0135	phosphoribosylanthranilate isomerase activity
FDV79_12205	COG0134	indole-3-glycerol-phosphate synthase activity
FDV79_12210	COG0133	tryptophan synthase activity
FDV79_12215	COG0159	tryptophan synthase activity
FDV79_12225	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FDV79_12230	COG0318	PFAM AMP-dependent synthetase and ligase
FDV79_12240	COG1301	dicarboxylic acid transport
FDV79_12260	COG2917	probably involved in intracellular septation
FDV79_12270	COG2350	Protein conserved in bacteria
FDV79_12280	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
FDV79_12290	COG0583	DNA-binding transcription factor activity
FDV79_12305	COG2203	Gaf domain
FDV79_12305	COG4251	negative regulation of phosphorylation
FDV79_12305	COG5001	Diguanylate cyclase
FDV79_12305	COG3706	GGDEF domain
FDV79_12310	COG1032	radical SAM domain protein
FDV79_12315	COG0840	transmembrane signaling receptor activity
FDV79_12325	COG0745	RESPONSE REGULATOR receiver
FDV79_12330	COG5002	protein histidine kinase activity
FDV79_12330	COG3850	Histidine kinase
FDV79_12380	COG1335	isochorismatase
FDV79_12385	COG1136	(ABC) transporter
FDV79_12385	COG0577	efflux transmembrane transporter activity
FDV79_12390	COG1136	(ABC) transporter
FDV79_12390	COG0577	efflux transmembrane transporter activity
FDV79_12395	COG1136	(ABC) transporter
FDV79_12395	COG0577	efflux transmembrane transporter activity
FDV79_12405	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FDV79_12435	COG3118	belongs to the thioredoxin family
FDV79_12440	COG4232	protein-disulfide reductase activity
FDV79_12480	COG2863	cytochrome
FDV79_12485	COG3258	Cytochrome c
FDV79_12490	COG2995	paraquat-inducible protein a
FDV79_12495	COG3008	intermembrane lipid transfer
FDV79_12495	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FDV79_12505	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
FDV79_12515	COG0463	Glycosyl transferase, family 2
FDV79_12530	COG4166	transmembrane transport
FDV79_12535	COG0284	orotidine-5'-phosphate decarboxylase activity
FDV79_12540	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
FDV79_12545	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
FDV79_12555	COG0539	negative regulation of cytoplasmic translation
FDV79_12560	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
FDV79_12565	COG0616	signal peptide processing
FDV79_12570	COG1028	Short-chain dehydrogenase reductase Sdr
FDV79_12585	COG0587	DNA-directed DNA polymerase activity
FDV79_12590	COG0784	Response regulator, receiver
FDV79_12590	COG0835	chemotaxis
FDV79_12595	COG1940	carbohydrate kinase activity
FDV79_12600	COG0469	pyruvate kinase activity
FDV79_12605	COG4667	esterase of the alpha-beta hydrolase superfamily
FDV79_12620	COG0733	neurotransmitter:sodium symporter activity
FDV79_12640	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FDV79_12640	COG1263	PTS System
FDV79_12645	COG0084	hydrolase, TatD family'
FDV79_12655	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
FDV79_12660	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
FDV79_12690	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FDV79_12695	COG0416	fatty acid biosynthetic process
FDV79_12705	COG1399	metal-binding, possibly nucleic acid-binding protein
FDV79_12710	COG0424	maF-like protein
FDV79_12715	COG0564	pseudouridine synthase activity
FDV79_12730	COG1530	ribonuclease E activity
FDV79_12740	COG0659	secondary active sulfate transmembrane transporter activity
FDV79_12745	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FDV79_12750	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
FDV79_12760	COG0572	uridine kinase
FDV79_12765	COG0489	protein tyrosine kinase activity
FDV79_12770	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FDV79_12770	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FDV79_12780	COG2186	Transcriptional regulator
FDV79_12785	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
FDV79_12790	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
FDV79_12795	COG3012	SEC-C Motif Domain Protein
FDV79_12795	COG3318	Belongs to the UPF0149 family
FDV79_12800	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FDV79_12805	COG3706	GGDEF domain
FDV79_12810	COG0366	Alpha amylase catalytic
FDV79_12815	COG1122	ATPase activity
FDV79_12820	COG4120	Belongs to the binding-protein-dependent transport system permease family
FDV79_12830	COG3092	negative regulation of chromosome organization
FDV79_12835	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FDV79_12840	COG0857	belongs to the CobB CobQ family
FDV79_12840	COG0280	phosphate acetyltransferase
FDV79_12845	COG3174	membrane
FDV79_12855	COG0435	Glutathione S-transferase
FDV79_12865	COG0444	Belongs to the ABC transporter superfamily
FDV79_12870	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FDV79_12875	COG0601	transmembrane transport
FDV79_12885	COG0314	molybdopterin synthase activity
FDV79_12890	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
FDV79_12895	COG0315	cyclic pyranopterin monophosphate synthase activity
FDV79_12900	COG0521	Mo-molybdopterin cofactor biosynthetic process
FDV79_12905	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
FDV79_12910	COG0391	Required for morphogenesis under gluconeogenic growth conditions
FDV79_12915	COG2198	Histidine kinase
FDV79_12920	COG2204	response regulator
FDV79_12925	COG0556	nucleotide-excision repair
FDV79_12940	COG4657	Part of a membrane complex involved in electron transport
FDV79_12945	COG2878	Part of a membrane complex involved in electron transport
FDV79_12950	COG4656	Part of a membrane complex involved in electron transport
FDV79_12955	COG4658	electron transport chain
FDV79_12960	COG4659	FMN binding
FDV79_12965	COG4660	Part of a membrane complex involved in electron transport
FDV79_12970	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
FDV79_12975	COG0346	lactoylglutathione lyase activity
FDV79_12985	COG2885	chlorophyll binding
FDV79_13000	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FDV79_13005	COG2056	Na+-H+ antiporter family
FDV79_13015	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
FDV79_13035	COG1454	alcohol dehydrogenase
FDV79_13035	COG1012	belongs to the aldehyde dehydrogenase family
FDV79_13040	COG2095	MarC family integral membrane protein
FDV79_13045	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FDV79_13050	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FDV79_13055	COG1757	Na H antiporter
FDV79_13070	COG3081	Nucleoid-associated protein
FDV79_13075	COG3082	Protein of unknown function (DUF1414)
FDV79_13080	COG3083	sulfuric ester hydrolase activity
FDV79_13090	COG0123	including yeast histone deacetylase and acetoin utilization protein
FDV79_13110	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FDV79_13115	COG0778	Nitroreductase
FDV79_13120	COG0446	pyridine nucleotide-disulphide oxidoreductase
FDV79_13120	COG1902	pentaerythritol trinitrate reductase activity
FDV79_13125	COG0616	signal peptide processing
FDV79_13130	COG0252	asparaginase activity
FDV79_13135	COG3139	Protein of unknown function (DUF1315)
FDV79_13145	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FDV79_13150	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FDV79_13165	COG2226	methyltransferase
FDV79_13185	COG1785	Belongs to the alkaline phosphatase family
FDV79_13195	COG0346	lactoylglutathione lyase activity
FDV79_13200	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
FDV79_13205	COG0668	transmembrane transport
FDV79_13210	COG2983	Belongs to the UPF0260 family
FDV79_13215	COG2261	transglycosylase associated protein
FDV79_13230	COG3681	Belongs to the UPF0597 family
FDV79_13235	COG0251	oxidation-reduction process
FDV79_13240	COG0814	amino acid
FDV79_13245	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
FDV79_13250	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
FDV79_13255	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
FDV79_13265	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
FDV79_13270	COG2832	Protein of unknown function (DUF454)
FDV79_13280	COG0745	RESPONSE REGULATOR receiver
FDV79_13285	COG0583	DNA-binding transcription factor activity
FDV79_13290	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
FDV79_13295	COG1286	toxin biosynthetic process
FDV79_13300	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
FDV79_13305	COG0285	dihydrofolate synthase activity
FDV79_13310	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
FDV79_13315	COG0101	tRNA pseudouridine synthase activity
FDV79_13325	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FDV79_13330	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FDV79_13340	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FDV79_13345	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FDV79_13345	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
FDV79_13350	COG0431	NADPH-dependent FMN reductase
FDV79_13365	COG3101	peptidyl-lysine hydroxylation
FDV79_13375	COG2860	membrane
FDV79_13380	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
FDV79_13385	COG2890	protein-(glutamine-N5) methyltransferase activity
FDV79_13390	COG2840	Smr protein MutS2
FDV79_13395	COG2062	phosphohistidine phosphatase, SixA
FDV79_13410	COG1024	Enoyl-CoA hydratase
FDV79_13410	COG1250	3-hydroxyacyl-CoA dehydrogenase
FDV79_13415	COG0183	Belongs to the thiolase family
FDV79_13435	COG2067	long-chain fatty acid transport protein
FDV79_13445	COG2853	Lipoprotein
FDV79_13460	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FDV79_13465	COG1138	Cytochrome C-type biogenesis protein
FDV79_13470	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
FDV79_13475	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FDV79_13480	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FDV79_13485	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FDV79_13490	COG4133	protoheme IX ABC transporter activity
FDV79_13500	COG0835	chemotaxis
FDV79_13510	COG1192	Involved in chromosome partitioning
FDV79_13515	COG2201	protein-glutamate methylesterase activity
FDV79_13520	COG0643	Histidine kinase
FDV79_13520	COG0784	Response regulator, receiver
FDV79_13520	COG2198	Histidine kinase
FDV79_13525	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
FDV79_13560	COG1684	flagellar biosynthetic protein fliR
FDV79_13565	COG1987	bacterial-type flagellum assembly
FDV79_13615	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FDV79_13625	COG1677	Flagellar hook-basal body complex protein FliE
FDV79_13635	COG4191	Histidine kinase
FDV79_13645	COG1516	flagellar protein fliS
FDV79_13655	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
FDV79_13660	COG1334	flagellar protein FlaG
FDV79_13665	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FDV79_13670	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FDV79_13680	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FDV79_13685	COG2837	iron assimilation
FDV79_13715	COG1393	Belongs to the ArsC family
FDV79_13720	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FDV79_13740	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FDV79_13745	COG2716	regulation of RNA biosynthetic process
FDV79_13750	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
FDV79_13765	COG4783	chaperone-mediated protein folding
FDV79_13770	COG1393	Belongs to the ArsC family
FDV79_13790	COG2233	PERMEase
FDV79_13795	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
FDV79_13800	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
FDV79_13805	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
FDV79_13810	COG0121	glutamine amidotransferase
FDV79_13815	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
FDV79_13820	COG1960	acyl-CoA dehydrogenase activity
FDV79_13830	COG0456	acetyltransferase
FDV79_13850	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FDV79_13855	COG0328	RNA-DNA hybrid ribonuclease activity
FDV79_13860	COG2226	methyltransferase
FDV79_13865	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FDV79_13870	COG1388	LysM domain
FDV79_13870	COG0741	lytic transglycosylase activity
FDV79_13880	COG3021	interspecies interaction between organisms
FDV79_13885	COG0347	Belongs to the P(II) protein family
FDV79_13895	COG0037	tRNA processing
FDV79_13900	COG0825	malonyl-CoA metabolic process
FDV79_13905	COG0587	DNA-directed DNA polymerase activity
FDV79_13915	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FDV79_13920	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
FDV79_13925	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FDV79_13930	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
FDV79_13940	COG0750	zinc metalloprotease
FDV79_13945	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
FDV79_13950	COG0575	Belongs to the CDS family
FDV79_13955	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
FDV79_13960	COG0233	cytoplasmic translational termination
FDV79_13965	COG0528	UMP kinase activity
FDV79_13970	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
FDV79_13975	COG0052	Belongs to the universal ribosomal protein uS2 family
FDV79_13980	COG0024	Methionine aminopeptidase
FDV79_13985	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
FDV79_13995	COG0564	pseudouridine synthase activity
FDV79_14000	COG3098	single-species biofilm formation
FDV79_14025	COG1671	Belongs to the UPF0178 family
FDV79_14030	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
FDV79_14045	COG0254	rRNA binding
FDV79_14050	COG1720	tRNA m6t6A37 methyltransferase activity
FDV79_14055	COG0442	prolyl-tRNA aminoacylation
FDV79_14075	COG0733	neurotransmitter:sodium symporter activity
FDV79_14090	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FDV79_14095	COG0514	ATP-dependent DNA helicase (RecQ)
FDV79_14100	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FDV79_14115	COG1477	protein flavinylation
FDV79_14120	COG2871	sodium ion transport
FDV79_14125	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
FDV79_14130	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
FDV79_14135	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
FDV79_14140	COG1805	sodium ion transport
FDV79_14145	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
FDV79_14150	COG0271	Belongs to the BolA IbaG family
FDV79_14155	COG2813	Specifically methylates the guanine in position
FDV79_14160	COG3056	Lipoprotein
FDV79_14180	COG1595	DNA-templated transcription, initiation
FDV79_14210	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
FDV79_14215	COG0693	protein deglycase activity
FDV79_14220	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FDV79_14225	COG3706	GGDEF domain
FDV79_14230	COG2166	iron-sulfur cluster assembly
FDV79_14235	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
FDV79_14240	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
FDV79_14255	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
FDV79_14255	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
FDV79_14265	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
FDV79_14270	COG1074	ATP-dependent DNA helicase activity
FDV79_14280	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
FDV79_14300	COG3141	response to X-ray
FDV79_14305	COG2171	N-acyltransferase activity
FDV79_14310	COG0584	glycerophosphoryl diester phosphodiesterase
FDV79_14315	COG2271	Major facilitator Superfamily
FDV79_14330	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
FDV79_14335	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
FDV79_14340	COG1349	DNA-binding transcription factor activity
FDV79_14345	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
FDV79_14350	COG0598	Magnesium transport protein CorA
FDV79_14365	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FDV79_14370	COG1609	Transcriptional regulator
FDV79_14375	COG2176	DNA-directed DNA polymerase activity
FDV79_14390	COG2017	converts alpha-aldose to the beta-anomer
FDV79_14395	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
FDV79_14405	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FDV79_14415	COG1609	Transcriptional regulator
FDV79_14420	COG3250	beta-galactosidase activity
FDV79_14425	COG2731	YhcH YjgK YiaL family protein
FDV79_14430	COG0531	amino acid
FDV79_14435	COG0583	DNA-binding transcription factor activity
FDV79_14495	COG4964	Belongs to the GSP D family
FDV79_14520	COG2169	Transcriptional regulator
FDV79_14525	COG1022	Amp-dependent synthetase and ligase
FDV79_14535	COG0583	DNA-binding transcription factor activity
FDV79_14540	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
FDV79_14545	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
FDV79_14555	COG0560	Phosphoserine phosphatase
FDV79_14565	COG0813	purine-nucleoside phosphorylase activity
FDV79_14570	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
FDV79_14575	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
FDV79_14580	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
FDV79_14585	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FDV79_14590	COG0084	hydrolase, TatD family'
FDV79_14600	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
FDV79_14620	COG3153	acetyltransferase
FDV79_14625	COG3154	lipid carrier protein
FDV79_14635	COG0826	peptidase U32
FDV79_14640	COG0826	peptidase U32
FDV79_14645	COG0534	Mate efflux family protein
FDV79_14660	COG1185	polyribonucleotide nucleotidyltransferase activity
FDV79_14665	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
FDV79_14670	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
FDV79_14675	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
FDV79_14680	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
FDV79_14685	COG0195	Participates in both transcription termination and antitermination
FDV79_14690	COG0779	Required for maturation of 30S ribosomal subunits
FDV79_14705	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FDV79_14715	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FDV79_14720	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
FDV79_14725	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FDV79_14730	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
FDV79_14735	COG1534	Rna-binding protein
FDV79_14740	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FDV79_14745	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FDV79_14750	COG2027	D-alanyl-D-alanine carboxypeptidase
FDV79_14760	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
FDV79_14765	COG0739	heme binding
FDV79_14770	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FDV79_14780	COG0316	Belongs to the HesB IscA family
FDV79_14785	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
FDV79_14790	COG0628	permease
FDV79_14795	COG2813	Specifically methylates the guanine in position
FDV79_14805	COG2198	Histidine kinase
FDV79_14805	COG2205	protein histidine kinase activity
FDV79_14805	COG0784	Response regulator, receiver
FDV79_14805	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FDV79_14810	COG0747	negative chemotaxis
FDV79_14820	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FDV79_14825	COG0444	Belongs to the ABC transporter superfamily
FDV79_14830	COG4608	Belongs to the ABC transporter superfamily
FDV79_14840	COG2971	BadF BadG BcrA BcrD
FDV79_14855	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FDV79_14860	COG3842	ATPase activity
FDV79_14870	COG1840	ABC-type Fe3 transport system, periplasmic component
FDV79_14875	COG0004	ammonium transporteR
FDV79_14885	COG3112	Uncharacterised protein family (UPF0231)
FDV79_14890	COG1049	propionate catabolic process, 2-methylcitrate cycle
FDV79_14895	COG1752	Esterase of the alpha-beta hydrolase superfamily
FDV79_14900	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FDV79_14905	COG1643	Atp-dependent helicase
FDV79_14910	COG1489	DNA binding
FDV79_14925	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FDV79_14940	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
FDV79_14945	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
FDV79_14950	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
FDV79_14960	COG1560	Kdo2-lipid A biosynthetic process
FDV79_14970	COG0842	Transport permease protein
FDV79_14975	COG1131	(ABC) transporter
FDV79_14985	COG0659	secondary active sulfate transmembrane transporter activity
FDV79_14990	COG0288	reversible hydration of carbon dioxide
FDV79_15005	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FDV79_15010	COG0508	dehydrogenase complex catalyzes the overall conversion of
FDV79_15015	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
FDV79_15020	COG2186	Transcriptional regulator
FDV79_15030	COG0157	Belongs to the NadC ModD family
FDV79_15035	COG4969	Belongs to the N-Me-Phe pilin family
FDV79_15040	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FDV79_15045	COG1459	type II secretion system
FDV79_15055	COG0237	dephospho-CoA kinase activity
FDV79_15060	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
FDV79_15065	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
FDV79_15070	COG0335	large ribosomal subunit rRNA binding
FDV79_15075	COG0336	Belongs to the RNA methyltransferase TrmD family
FDV79_15080	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
FDV79_15085	COG0228	four-way junction DNA binding
FDV79_15090	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
FDV79_15095	COG4137	Cytochrome C assembly protein
FDV79_15100	COG4536	flavin adenine dinucleotide binding
FDV79_15105	COG1854	S-ribosylhomocysteine lyase activity
FDV79_15115	COG2918	glutathione biosynthetic process
FDV79_15120	COG0612	Peptidase, M16
FDV79_15125	COG1238	metal cluster binding
FDV79_15130	COG1063	alcohol dehydrogenase
FDV79_15135	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
FDV79_15140	COG0511	ligase activity, forming carbon-carbon bonds
FDV79_15140	COG5016	pyruvate
FDV79_15145	COG3630	sodium ion export across plasma membrane
FDV79_15205	COG0527	aspartate kinase activity
FDV79_15210	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
FDV79_15215	COG2137	regulation of response to DNA damage stimulus
FDV79_15220	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
FDV79_15225	COG1546	Belongs to the CinA family
FDV79_15230	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
FDV79_15245	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
FDV79_15250	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
FDV79_15255	COG0585	pseudouridine synthase activity
FDV79_15260	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
FDV79_15265	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
FDV79_15270	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
FDV79_15275	COG0148	phosphopyruvate hydratase activity
FDV79_15280	COG0504	CTP synthase activity
FDV79_15285	COG3956	TIGRFAM MazG family protein
FDV79_15290	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FDV79_15300	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FDV79_15315	COG0736	holo-[acyl-carrier-protein] synthase activity
FDV79_15320	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
FDV79_15325	COG1381	Involved in DNA repair and RecF pathway recombination
FDV79_15330	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
FDV79_15335	COG0571	ribonuclease III activity
FDV79_15345	COG0481	GTPase activity
FDV79_15350	COG3086	response to oxidative stress
FDV79_15360	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
FDV79_15365	COG1595	DNA-templated transcription, initiation
FDV79_15375	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
FDV79_15385	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
FDV79_15390	COG0354	folic acid binding
FDV79_15405	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FDV79_15410	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FDV79_15415	COG3079	Belongs to the UPF0149 family
FDV79_15425	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
FDV79_15435	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
FDV79_15440	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
FDV79_15445	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FDV79_15455	COG0583	DNA-binding transcription factor activity
FDV79_15465	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FDV79_15470	COG0668	transmembrane transport
FDV79_15475	COG0191	fructose-bisphosphate aldolase activity
FDV79_15480	COG0126	phosphoglycerate kinase activity
FDV79_15485	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FDV79_15490	COG4771	TonB-dependent receptor
FDV79_15495	COG0583	DNA-binding transcription factor activity
FDV79_15500	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
FDV79_15510	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
FDV79_15520	COG3091	SprT-like family
FDV79_15525	COG2356	endonuclease I
FDV79_15530	COG1385	rRNA (uridine-N3-)-methyltransferase activity
FDV79_15535	COG0189	ligase activity
FDV79_15540	COG1678	Uncharacterized ACR, COG1678
FDV79_15545	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
FDV79_15560	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
FDV79_15565	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FDV79_15570	COG0762	integral membrane protein
FDV79_15575	COG1872	DUF167
FDV79_15585	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
FDV79_15590	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FDV79_15595	COG2066	Belongs to the glutaminase family
FDV79_15605	COG0220	tRNA (guanine-N7-)-methyltransferase activity
FDV79_15615	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
FDV79_15620	COG0741	lytic transglycosylase activity
FDV79_15660	COG0840	transmembrane signaling receptor activity
FDV79_15690	COG1012	belongs to the aldehyde dehydrogenase family
FDV79_15740	COG3437	response regulator, receiver
FDV79_15750	COG3394	polysaccharide catabolic process
FDV79_15755	COG1486	melibiose metabolic process
FDV79_15760	COG1447	Phosphotransferase system cellobiose-specific component IIA
FDV79_15765	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FDV79_15770	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FDV79_15775	COG0726	polysaccharide deacetylase
FDV79_15785	COG1028	Short-chain dehydrogenase reductase Sdr
FDV79_15800	COG0795	lipopolysaccharide-transporting ATPase activity
FDV79_15805	COG0795	lipopolysaccharide-transporting ATPase activity
FDV79_15810	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
FDV79_15815	COG2927	DNA polymerase III (CHI subunit)
FDV79_15820	COG0525	valine-tRNA ligase activity
FDV79_15850	COG2235	arginine
FDV79_15855	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
FDV79_15865	COG0540	Belongs to the ATCase OTCase family
FDV79_15870	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
FDV79_15875	COG0251	oxidation-reduction process
FDV79_15880	COG0204	Acyl-transferase
FDV79_15885	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
FDV79_15890	COG5007	Belongs to the BolA IbaG family
FDV79_15900	COG2854	intermembrane phospholipid transfer
FDV79_15905	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FDV79_15910	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
FDV79_15915	COG1127	ABC transporter
FDV79_15925	COG0517	IMP dehydrogenase activity
FDV79_15925	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
FDV79_15935	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
FDV79_15940	COG1137	ATPase activity
FDV79_15950	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
FDV79_15955	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FDV79_15960	COG1660	Displays ATPase and GTPase activities
FDV79_15965	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FDV79_15970	COG2239	Acts as a magnesium transporter
FDV79_15975	COG0312	modulator of DNA gyrase
FDV79_15980	COG3028	Belongs to the UPF0307 family
FDV79_15985	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FDV79_15990	COG0564	pseudouridine synthase activity
FDV79_16005	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
FDV79_16010	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
FDV79_16015	COG0312	modulator of DNA gyrase
FDV79_16020	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FDV79_16025	COG3164	Protein of unknown function
FDV79_16030	COG1530	ribonuclease E activity
FDV79_16035	COG0424	maF-like protein
FDV79_16040	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
FDV79_16045	COG1792	Involved in formation and maintenance of cell shape
FDV79_16050	COG1077	Cell shape determining protein MreB Mrl
FDV79_16095	COG1459	type II secretion system
FDV79_16100	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FDV79_16110	COG3409	Peptidoglycan-binding domain 1 protein
FDV79_16110	COG3267	Type II secretory pathway component ExeA
FDV79_16135	COG2199	diguanylate cyclase activity
FDV79_16135	COG2200	EAL domain
FDV79_16140	COG0629	single-stranded DNA binding
FDV79_16155	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FDV79_16165	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
FDV79_16175	COG0527	aspartate kinase activity
FDV79_16180	COG1410	methionine synthase
FDV79_16180	COG0646	methionine synthase
FDV79_16260	COG0175	sulfate reduction
FDV79_16265	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FDV79_16270	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
FDV79_16295	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FDV79_16305	COG0735	belongs to the Fur family
FDV79_16315	COG0166	Belongs to the GPI family
FDV79_16320	COG0432	Pfam Uncharacterised protein family UPF0047
FDV79_16330	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FDV79_16345	COG0359	binds to the 23S rRNA
FDV79_16355	COG2965	DNA replication, synthesis of RNA primer
FDV79_16360	COG0360	Binds together with S18 to 16S ribosomal RNA
FDV79_16365	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
FDV79_16370	COG0338	D12 class N6 adenine-specific DNA methyltransferase
FDV79_16380	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
FDV79_16385	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
FDV79_16415	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
FDV79_16425	COG0678	peroxiredoxin activity
FDV79_16425	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FDV79_16440	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
FDV79_16440	COG0165	Argininosuccinate lyase
FDV79_16445	COG0137	argininosuccinate synthase activity
FDV79_16450	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
FDV79_16455	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
FDV79_16460	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FDV79_16465	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
FDV79_16475	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
FDV79_16480	COG0460	homoserine dehydrogenase
FDV79_16480	COG0527	aspartate kinase activity
FDV79_16485	COG0626	cystathionine gamma-synthase activity
FDV79_16495	COG0281	malic enzyme
FDV79_16505	COG2906	2 iron, 2 sulfur cluster binding
FDV79_16510	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
FDV79_16515	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
FDV79_16520	COG0049	tRNA binding
FDV79_16530	COG2168	tRNA wobble position uridine thiolation
FDV79_16535	COG2923	Belongs to the DsrF TusC family
FDV79_16540	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
FDV79_16545	COG2964	Protein conserved in bacteria
FDV79_16550	COG0545	Peptidyl-prolyl cis-trans isomerase
FDV79_16560	COG2900	Belongs to the SlyX family
FDV79_16565	COG1446	asparaginase
FDV79_16575	COG1047	Peptidyl-prolyl cis-trans
FDV79_16590	COG2249	NAD(P)H dehydrogenase (quinone) activity
FDV79_16600	COG0488	(ABC) transporter
FDV79_16610	COG0429	hydrolase of the alpha beta-hydrolase fold
FDV79_16615	COG3089	Belongs to the UPF0270 family
FDV79_16620	COG3954	Phosphoribulokinase
FDV79_16625	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FDV79_16635	COG1012	belongs to the aldehyde dehydrogenase family
FDV79_16645	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FDV79_16650	COG0512	Glutamine amidotransferase of anthranilate synthase
FDV79_16680	COG0180	Tryptophanyl-tRNA synthetase
FDV79_16685	COG0546	phosphoglycolate phosphatase activity
FDV79_16690	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FDV79_16695	COG0557	exoribonuclease II activity
FDV79_16700	COG1959	2 iron, 2 sulfur cluster binding
FDV79_16705	COG1017	nitric oxide dioxygenase activity
FDV79_16705	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FDV79_16710	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
FDV79_16720	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
FDV79_16725	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
FDV79_16730	COG0330	HflC and HflK could
FDV79_16735	COG0330	HflC and HflK could
FDV79_16740	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
FDV79_16750	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
FDV79_16755	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
FDV79_16760	COG0860	N-Acetylmuramoyl-L-alanine amidase
FDV79_16765	COG0802	atpase or kinase
FDV79_16770	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
FDV79_16840	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
FDV79_16845	COG1162	GTPase activity
FDV79_16850	COG0688	phosphatidylethanolamine metabolic process
FDV79_16855	COG0471	metal ion transport
FDV79_16870	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
FDV79_16880	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FDV79_16885	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
FDV79_16890	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
FDV79_16895	COG1045	serine acetyltransferase
FDV79_16900	COG4942	peptidase
FDV79_16920	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
FDV79_16930	COG1053	succinate dehydrogenase
FDV79_16935	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
FDV79_16940	COG3029	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
FDV79_16945	COG3080	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
FDV79_16955	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
FDV79_16960	COG1509	lysine 2,3-aminomutase activity
FDV79_16970	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FDV79_16985	COG0459	protein refolding
FDV79_16995	COG0534	Mate efflux family protein
FDV79_17000	COG0205	6-phosphofructokinase activity
FDV79_17010	COG3678	ATP-independent chaperone mediated protein folding
FDV79_17020	COG0745	RESPONSE REGULATOR receiver
FDV79_17025	COG2205	protein histidine kinase activity
FDV79_17035	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
FDV79_17040	COG3030	protein affecting phage T7 exclusion by the F plasmid
FDV79_17070	COG0546	phosphoglycolate phosphatase activity
FDV79_17085	COG0583	DNA-binding transcription factor activity
FDV79_17095	COG0583	DNA-binding transcription factor activity
FDV79_17105	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
FDV79_17110	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
FDV79_17110	COG3408	Glycogen debranching enzyme
FDV79_17140	COG3047	cAMP biosynthetic process
FDV79_17145	COG1357	PFAM Pentapeptide repeats (8 copies)
FDV79_17175	COG2375	cellular response to nickel ion
FDV79_17180	COG0823	Involved in the tonB-independent uptake of proteins
FDV79_17185	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FDV79_17205	COG0800	Aldolase
FDV79_17210	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FDV79_17225	COG1917	Cupin 2, conserved barrel domain protein
FDV79_17235	COG1028	Short-chain dehydrogenase reductase Sdr
FDV79_17240	COG1414	Transcriptional regulator
FDV79_17255	COG0583	DNA-binding transcription factor activity
FDV79_17260	COG2162	N-hydroxyarylamine O-acetyltransferase activity
FDV79_17265	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
FDV79_17280	COG2199	diguanylate cyclase activity
FDV79_17290	COG0561	phosphatase activity
FDV79_17295	COG0583	DNA-binding transcription factor activity
FDV79_17310	COG0564	pseudouridine synthase activity
FDV79_17315	COG0534	Mate efflux family protein
FDV79_17325	COG5001	Diguanylate cyclase
FDV79_17335	COG3123	guanosine phosphorylase activity
FDV79_17375	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FDV79_17385	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FDV79_17390	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
FDV79_17405	COG2259	Doxx family
FDV79_17410	COG1741	Belongs to the pirin family
FDV79_17430	COG0363	glucosamine-6-phosphate deaminase activity
FDV79_17445	COG0786	glutamate:sodium symporter activity
FDV79_17450	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FDV79_17455	COG1131	(ABC) transporter
FDV79_17465	COG0786	glutamate:sodium symporter activity
FDV79_17500	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
FDV79_17510	COG3279	Response regulator of the LytR AlgR family
FDV79_17515	COG3275	phosphorelay sensor kinase activity
FDV79_17550	COG0772	Belongs to the SEDS family
FDV79_17555	COG0217	transcriptional regulatory protein
FDV79_17580	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
FDV79_17580	COG3236	hydrolase activity, hydrolyzing N-glycosyl compounds
FDV79_17590	COG0444	Belongs to the ABC transporter superfamily
FDV79_17595	COG4608	Belongs to the ABC transporter superfamily
FDV79_17620	COG1444	tRNA N-acetyltransferase activity
FDV79_17640	COG3340	Belongs to the peptidase S51 family
FDV79_17645	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FDV79_17650	COG1263	PTS System
FDV79_17650	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FDV79_17655	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
FDV79_17675	COG4166	transmembrane transport
FDV79_17720	COG0259	pyridoxamine-phosphate oxidase activity
FDV79_17750	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FDV79_17795	COG1132	(ABC) transporter
FDV79_17805	COG2207	Transcriptional regulator
FDV79_17825	COG0513	Belongs to the DEAD box helicase family
FDV79_17830	COG2258	MOSC domain
FDV79_17845	COG1486	melibiose metabolic process
FDV79_17850	COG0583	DNA-binding transcription factor activity
FDV79_17870	COG1595	DNA-templated transcription, initiation
FDV79_17905	COG3634	alkyl hydroperoxide reductase activity
FDV79_17915	COG1846	Transcriptional regulator
FDV79_17920	COG1764	response to oxidative stress
FDV79_17940	COG0463	Glycosyl transferase, family 2
FDV79_17980	COG0745	RESPONSE REGULATOR receiver
FDV79_17990	COG1653	transport
FDV79_17995	COG0019	diaminopimelate decarboxylase activity
FDV79_18000	COG4264	IucA IucC family
FDV79_18025	COG4772	TonB-dependent receptor
FDV79_18030	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
FDV79_18035	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FDV79_18040	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FDV79_18045	COG1120	ATPase activity
FDV79_18050	COG0840	transmembrane signaling receptor activity
FDV79_18055	COG0612	Peptidase, M16
FDV79_18065	COG0739	heme binding
FDV79_18075	COG2814	Major facilitator Superfamily
FDV79_18090	COG4580	involved in the transport of maltose and maltodextrins
FDV79_18115	COG2356	endonuclease I
FDV79_18135	COG1982	Orn Lys Arg decarboxylase major
FDV79_18140	COG0531	amino acid
FDV79_18150	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
FDV79_18160	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
FDV79_18165	COG1162	GTPase activity
FDV79_18170	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FDV79_18170	COG1263	PTS System
FDV79_18180	COG1999	signal sequence binding
FDV79_18195	COG2909	trisaccharide binding
FDV79_18210	COG0058	SHG alpha-glucan phosphorylase activity
FDV79_18215	COG1640	4-alpha-glucanotransferase
FDV79_18220	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
FDV79_18225	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FDV79_18230	COG0366	Alpha amylase catalytic
FDV79_18245	COG3366	ferrous iron transmembrane transporter activity
FDV79_18250	COG0700	Nucleoside recognition
FDV79_18255	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FDV79_18260	COG3339	Conserved Protein
FDV79_18265	COG1301	dicarboxylic acid transport
FDV79_18275	COG0583	DNA-binding transcription factor activity
FDV79_18290	COG3206	protein involved in exopolysaccharide biosynthesis
FDV79_18290	COG0489	protein tyrosine kinase activity
FDV79_18310	COG2095	MarC family integral membrane protein
FDV79_18315	COG4667	esterase of the alpha-beta hydrolase superfamily
FDV79_18320	COG3397	chitin binding
FDV79_18340	COG1686	Belongs to the peptidase S11 family
FDV79_18365	COG0583	DNA-binding transcription factor activity
FDV79_18370	COG4628	conserved protein (DUF2132)
FDV79_18380	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FDV79_18390	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
FDV79_18395	COG0628	permease
FDV79_18440	COG2814	Major facilitator Superfamily
FDV79_18450	COG0454	-acetyltransferase
FDV79_18460	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FDV79_18465	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FDV79_18470	COG1882	Formate acetyltransferase
FDV79_18520	COG1360	Flagellar Motor Protein
FDV79_18525	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
FDV79_18530	COG1191	sigma factor activity
FDV79_18535	COG1580	Controls the rotational direction of flagella during chemotaxis
FDV79_18550	COG1516	flagellar protein fliS
FDV79_18555	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
FDV79_18565	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FDV79_18580	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FDV79_18590	COG1987	bacterial-type flagellum assembly
FDV79_18670	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
FDV79_18690	COG0346	lactoylglutathione lyase activity
FDV79_18725	COG0745	RESPONSE REGULATOR receiver
FDV79_18745	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FDV79_18755	COG0156	8-amino-7-oxononanoate synthase activity
FDV79_18760	COG1063	alcohol dehydrogenase
FDV79_18800	COG0668	transmembrane transport
FDV79_18810	COG1304	FMN binding
FDV79_18815	COG1620	l-lactate permease
FDV79_18820	COG0583	DNA-binding transcription factor activity
FDV79_18825	COG1505	serine-type exopeptidase activity
FDV79_18830	COG4172	Belongs to the ABC transporter superfamily
FDV79_18840	COG1067	ATP-dependent peptidase activity
FDV79_18870	COG1247	-acetyltransferase
FDV79_18875	COG0437	4 iron, 4 sulfur cluster binding
FDV79_18880	COG0348	domain, Protein
FDV79_18895	COG1122	ATPase activity
FDV79_18900	COG4720	Psort location CytoplasmicMembrane, score
FDV79_18905	COG1566	PFAM secretion protein HlyD family protein
FDV79_18915	COG3706	GGDEF domain
FDV79_18930	COG0813	purine-nucleoside phosphorylase activity
FDV79_18940	COG3272	Protein of unknown function (DUF1722)
FDV79_18945	COG0789	Transcriptional regulator
FDV79_18950	COG0415	Belongs to the DNA photolyase family
FDV79_18955	COG1376	ErfK ybiS ycfS ynhG family protein
FDV79_18955	COG1388	LysM domain
FDV79_18965	COG0513	Belongs to the DEAD box helicase family
FDV79_18970	COG1770	oligopeptidase
FDV79_18975	COG4771	TonB-dependent receptor
FDV79_19005	COG0573	inorganic phosphate transmembrane transporter activity
FDV79_19010	COG0581	inorganic phosphate transmembrane transporter activity
FDV79_19015	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
FDV79_19035	COG2304	oxidoreductase activity
FDV79_19055	COG0714	Associated with various cellular activities
FDV79_19065	COG0840	transmembrane signaling receptor activity
FDV79_19075	COG2197	response regulator
FDV79_19125	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
FDV79_19130	COG1120	ATPase activity
FDV79_19135	COG4774	siderophore transport
FDV79_19140	COG1132	(ABC) transporter
FDV79_19145	COG2205	protein histidine kinase activity
FDV79_19155	COG0569	domain protein
FDV79_19160	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FDV79_19170	COG3241	Transfers electrons from cytochrome c551 to cytochrome oxidase
FDV79_19175	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FDV79_19190	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FDV79_19190	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FDV79_19190	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FDV79_19195	COG2207	Transcriptional regulator
FDV79_19205	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FDV79_19210	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FDV79_19215	COG2084	Dehydrogenase
FDV79_19220	COG0753	catalase activity
FDV79_19230	COG2130	NADP-dependent
FDV79_19235	COG1309	transcriptional regulator
FDV79_19295	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FDV79_19300	COG3842	ATPase activity
FDV79_19310	COG1175	transmembrane transport
FDV79_19315	COG3833	ABC-type maltose transport systems, permease component
FDV79_19335	COG3746	phosphate-selective porin O and P
FDV79_19355	COG1028	Short-chain dehydrogenase reductase Sdr
FDV79_19375	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FDV79_19390	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
FDV79_19400	COG0625	glutathione transferase activity
FDV79_19415	COG1686	Belongs to the peptidase S11 family
FDV79_19440	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
FDV79_19460	COG1278	Cold shock
FDV79_19465	COG1741	Belongs to the pirin family
FDV79_19470	COG4667	esterase of the alpha-beta hydrolase superfamily
FDV79_19495	COG2814	Major facilitator Superfamily
FDV79_19505	COG0673	inositol 2-dehydrogenase activity
FDV79_19510	COG2194	sulfuric ester hydrolase activity
FDV79_19515	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
FDV79_19525	COG2205	protein histidine kinase activity
FDV79_19530	COG0745	RESPONSE REGULATOR receiver
FDV79_19535	COG4221	oxidoreductase activity
FDV79_19555	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FDV79_19575	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
FDV79_19585	COG2814	Major facilitator Superfamily
FDV79_19600	COG1418	mRNA catabolic process
FDV79_19610	COG0402	S-adenosylhomocysteine deaminase activity
FDV79_19615	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
FDV79_19625	COG2239	Acts as a magnesium transporter
FDV79_19630	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
FDV79_19645	COG0531	amino acid
FDV79_19655	COG1522	sequence-specific DNA binding
FDV79_19680	COG2205	protein histidine kinase activity
FDV79_19680	COG0784	Response regulator, receiver
FDV79_19680	COG5002	protein histidine kinase activity
FDV79_19685	COG0673	inositol 2-dehydrogenase activity
FDV79_19690	COG0534	Mate efflux family protein
FDV79_19695	COG2926	Belongs to the UPF0265 family
FDV79_19710	COG3132	Protein of unknown function, DUF480
FDV79_19715	COG2827	Endonuclease containing a URI domain
FDV79_19720	COG1879	ABC-type sugar transport system periplasmic component
FDV79_19725	COG2205	protein histidine kinase activity
FDV79_19725	COG0784	Response regulator, receiver
FDV79_19735	COG1566	PFAM secretion protein HlyD family protein
FDV79_19755	COG1522	sequence-specific DNA binding
FDV79_19785	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FDV79_19790	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FDV79_19810	COG0183	Belongs to the thiolase family
FDV79_19830	COG3005	denitrification pathway
FDV79_19840	COG0243	molybdopterin cofactor binding
FDV79_19850	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FDV79_19855	COG3850	Histidine kinase
FDV79_19860	COG2197	response regulator
FDV79_19875	COG2195	Cleaves the N-terminal amino acid of tripeptides
FDV79_19895	COG0840	transmembrane signaling receptor activity
FDV79_19905	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FDV79_19920	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FDV79_19925	COG2814	Major facilitator Superfamily
FDV79_19935	COG0840	transmembrane signaling receptor activity
FDV79_19940	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
FDV79_19945	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FDV79_19975	COG2897	thiosulfate sulfurtransferase activity
FDV79_19995	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FDV79_20005	COG0302	gtp cyclohydrolase
FDV79_20010	COG1914	H( )-stimulated, divalent metal cation uptake system
FDV79_20020	COG0038	chloride channel
FDV79_20035	COG4989	oxidoreductase activity
FDV79_20050	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
FDV79_20050	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
FDV79_20055	COG0516	GMP reductase activity
FDV79_20060	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FDV79_20130	COG3474	cytochrome
FDV79_20140	COG0789	Transcriptional regulator
FDV79_20145	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FDV79_20150	COG0384	phenazine biosynthesis protein PhzF
FDV79_20160	COG1294	oxidase, subunit
FDV79_20165	COG1271	oxidase subunit
FDV79_20170	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FDV79_20175	COG0110	maltose O-acetyltransferase activity
FDV79_20185	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
FDV79_20185	COG3264	Mechanosensitive ion channel
FDV79_20200	COG3437	response regulator, receiver
FDV79_20200	COG2205	protein histidine kinase activity
FDV79_20200	COG4999	Histidine kinase
FDV79_20200	COG3850	Histidine kinase
FDV79_20210	COG4770	biotin carboxylase activity
FDV79_20220	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FDV79_20225	COG1960	acyl-CoA dehydrogenase activity
FDV79_20235	COG0183	Belongs to the thiolase family
FDV79_20245	COG1960	acyl-CoA dehydrogenase activity
FDV79_20250	COG1024	Enoyl-CoA hydratase
FDV79_20265	COG1028	Short-chain dehydrogenase reductase Sdr
FDV79_20275	COG3706	GGDEF domain
FDV79_20280	COG1309	transcriptional regulator
FDV79_20285	COG1012	belongs to the aldehyde dehydrogenase family
FDV79_20300	COG4176	ABC-type proline glycine betaine transport system permease component
FDV79_20305	COG4175	Glycine betaine
FDV79_20305	COG0517	IMP dehydrogenase activity
FDV79_20320	COG0330	HflC and HflK could
FDV79_20330	COG3300	MHYT domain
FDV79_20330	COG5001	Diguanylate cyclase
FDV79_20350	COG0784	Response regulator, receiver
FDV79_20350	COG2205	protein histidine kinase activity
FDV79_20380	COG0582	viral genome integration into host DNA
FDV79_20410	COG0758	DNA mediated transformation
FDV79_20500	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FDV79_20505	COG5001	Diguanylate cyclase
FDV79_20510	COG1869	D-ribose catabolic process
FDV79_20515	COG1129	ABC transporter
FDV79_20520	COG1172	Belongs to the binding-protein-dependent transport system permease family
FDV79_20525	COG1879	ABC-type sugar transport system periplasmic component
FDV79_20530	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FDV79_20535	COG1609	Transcriptional regulator
FDV79_20550	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
FDV79_20570	COG0745	RESPONSE REGULATOR receiver
FDV79_20585	COG1785	Belongs to the alkaline phosphatase family
FDV79_20615	COG0814	amino acid
FDV79_20625	COG0243	molybdopterin cofactor binding
FDV79_20630	COG1648	precorrin-2 dehydrogenase activity
FDV79_20630	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
FDV79_20650	COG3707	response regulator
FDV79_20660	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FDV79_20665	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FDV79_20670	COG1116	anion transmembrane transporter activity
FDV79_20675	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FDV79_20675	COG2146	nitrite reductase [NAD(P)H] activity
FDV79_20730	COG0515	serine threonine protein kinase
FDV79_20730	COG2815	serine threonine protein kinase
FDV79_20765	COG0631	protein serine/threonine phosphatase activity
FDV79_20820	COG3501	Rhs element vgr protein
FDV79_20835	COG0420	3'-5' exonuclease activity
FDV79_20840	COG0419	ATPase involved in DNA repair
FDV79_20860	COG3040	lipid binding
FDV79_20870	COG2814	Major facilitator Superfamily
FDV79_20880	COG1288	antiporter activity
FDV79_20895	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
FDV79_20910	COG2425	protein containing a von Willebrand factor type A (vWA) domain
FDV79_20930	COG0583	DNA-binding transcription factor activity
FDV79_20935	COG0277	FAD linked oxidase domain protein
FDV79_20955	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FDV79_20995	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
FDV79_20995	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FDV79_21040	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FDV79_21045	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FDV79_21055	COG2116	formate transmembrane transporter activity
FDV79_21075	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
FDV79_21110	COG0534	Mate efflux family protein
FDV79_21115	COG0745	RESPONSE REGULATOR receiver
FDV79_21115	COG2205	protein histidine kinase activity
FDV79_21115	COG3292	Two component regulator propeller
FDV79_21125	COG3118	belongs to the thioredoxin family
FDV79_21130	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FDV79_21155	COG2271	Major facilitator Superfamily
FDV79_21160	COG3851	Histidine kinase
FDV79_21165	COG2197	response regulator
FDV79_21175	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
FDV79_21180	COG0583	DNA-binding transcription factor activity
FDV79_21190	COG0243	molybdopterin cofactor binding
FDV79_21220	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FDV79_21235	COG1328	CTP reductase activity
FDV79_21240	COG0602	queuosine metabolic process
FDV79_21245	COG0534	Mate efflux family protein
FDV79_21265	COG4067	protein conserved in archaea
FDV79_21265	COG0189	ligase activity
FDV79_21275	COG3111	PFAM Bacterial OB fold (BOF) protein
FDV79_21280	COG1492	cobalamin metabolic process
FDV79_21285	COG0725	ABC transporter, periplasmic molybdate-binding protein
FDV79_21290	COG4149	molybdate abc transporter
FDV79_21295	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
FDV79_21305	COG3706	GGDEF domain
FDV79_21305	COG4251	negative regulation of phosphorylation
FDV79_21305	COG2203	Gaf domain
FDV79_21305	COG5001	Diguanylate cyclase
FDV79_21330	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
FDV79_21335	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
FDV79_21360	COG3140	Belongs to the UPF0181 family
FDV79_21365	COG0589	response to stress
FDV79_21375	COG0583	DNA-binding transcription factor activity
FDV79_21395	COG0023	Translation Initiation Factor
FDV79_21405	COG1181	Belongs to the D-alanine--D-alanine ligase family
FDV79_21415	COG0045	succinate-CoA ligase (ADP-forming) activity
FDV79_21415	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FDV79_21415	COG1042	CoA-binding domain protein
FDV79_21420	COG0583	DNA-binding transcription factor activity
FDV79_21425	COG4771	TonB-dependent receptor
FDV79_21425	COG1629	transport
FDV79_21435	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FDV79_21440	COG5001	Diguanylate cyclase
FDV79_21440	COG3447	MASE1 domain protein
FDV79_21440	COG5002	protein histidine kinase activity
FDV79_21445	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
FDV79_21450	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
FDV79_21455	COG1984	allophanate hydrolase subunit 2
FDV79_21460	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FDV79_21460	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
FDV79_21465	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
FDV79_21470	COG4181	ATPase activity
FDV79_21480	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
FDV79_21485	COG5001	Diguanylate cyclase
FDV79_21485	COG3300	MHYT domain
FDV79_21495	COG0484	heat shock protein binding
FDV79_21520	COG4533	DNA binding
FDV79_21530	COG2050	protein possibly involved in aromatic compounds catabolism
FDV79_21545	COG2067	long-chain fatty acid transport protein
FDV79_21550	COG2267	carboxylic ester hydrolase activity
FDV79_21565	COG0861	Integral membrane protein TerC family
FDV79_21570	COG0737	Belongs to the 5'-nucleotidase family
FDV79_21575	COG3593	DNA synthesis involved in DNA repair
FDV79_21585	COG0583	DNA-binding transcription factor activity
FDV79_21590	COG2116	formate transmembrane transporter activity
FDV79_21595	COG2353	YceI-like domain
FDV79_21600	COG3038	cytochrome b561
FDV79_21615	COG4943	cyclic-guanylate-specific phosphodiesterase activity
FDV79_21620	COG0513	Belongs to the DEAD box helicase family
FDV79_21625	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
FDV79_21635	COG0840	transmembrane signaling receptor activity
FDV79_21645	COG0546	phosphoglycolate phosphatase activity
FDV79_21655	COG3437	response regulator, receiver
FDV79_21655	COG0784	Response regulator, receiver
FDV79_21675	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FDV79_21680	COG2759	Belongs to the formate--tetrahydrofolate ligase family
FDV79_21685	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
FDV79_21700	COG2207	Transcriptional regulator
FDV79_21705	COG1979	alcohol dehydrogenase
FDV79_21730	COG2271	Major facilitator Superfamily
FDV79_21735	COG0469	pyruvate kinase activity
FDV79_21740	COG1126	abc transporter atp-binding protein
FDV79_21745	COG0765	amino acid transport
FDV79_21750	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FDV79_21755	COG0765	amino acid transport
FDV79_21760	COG2200	EAL domain
FDV79_21760	COG2203	Gaf domain
FDV79_21760	COG2199	diguanylate cyclase activity
FDV79_21780	COG1609	Transcriptional regulator
FDV79_21785	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FDV79_21785	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
FDV79_21790	COG1105	Belongs to the carbohydrate kinase PfkB family
FDV79_21795	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
FDV79_21795	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FDV79_21795	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FDV79_21835	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
FDV79_21840	COG0509	glycine decarboxylation via glycine cleavage system
FDV79_21845	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
FDV79_21845	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
FDV79_21870	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
FDV79_21875	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
FDV79_21880	COG0583	DNA-binding transcription factor activity
FDV79_21885	COG2176	DNA-directed DNA polymerase activity
FDV79_21930	COG0242	peptide deformylase activity
FDV79_21965	COG2239	Acts as a magnesium transporter
FDV79_21985	COG0346	lactoylglutathione lyase activity
FDV79_21990	COG1902	pentaerythritol trinitrate reductase activity
FDV79_22010	COG5642	Protein of unknown function (DUF2384)
FDV79_22015	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
FDV79_22035	COG4565	transcriptional regulatory protein
FDV79_22040	COG3290	protein histidine kinase activity
FDV79_22045	COG0471	metal ion transport
FDV79_22075	COG2076	Multidrug Resistance protein
FDV79_22090	COG0671	phosphoesterase, PA-phosphatase related
FDV79_22105	COG2962	Rard protein
FDV79_22125	COG0784	Response regulator, receiver
FDV79_22125	COG0835	chemotaxis
FDV79_22150	COG2197	response regulator
FDV79_22160	COG3706	GGDEF domain
FDV79_22165	COG2197	response regulator
FDV79_22170	COG5001	Diguanylate cyclase
FDV79_22170	COG3300	MHYT domain
FDV79_22185	COG0583	DNA-binding transcription factor activity
FDV79_22190	COG0583	DNA-binding transcription factor activity
FDV79_22250	COG4964	Belongs to the GSP D family
FDV79_22275	COG2207	Transcriptional regulator
FDV79_22285	COG4934	collagen metabolic process
FDV79_22295	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
FDV79_22315	COG1214	PFAM Peptidase M22, glycoprotease
FDV79_22315	COG0456	acetyltransferase
FDV79_22325	COG3069	C4-dicarboxylate transmembrane transporter activity
FDV79_22330	COG1704	LemA family
FDV79_22335	COG0501	Belongs to the peptidase M48B family
FDV79_22365	COG0641	radical SAM
FDV79_22385	COG3111	PFAM Bacterial OB fold (BOF) protein
FDV79_22390	COG1597	lipid kinase activity
FDV79_22395	COG0583	DNA-binding transcription factor activity
FDV79_22400	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FDV79_22430	COG0714	Associated with various cellular activities
FDV79_22435	COG0641	radical SAM
FDV79_22440	COG3119	arylsulfatase activity
FDV79_22455	COG3119	arylsulfatase activity
FDV79_22460	COG3119	arylsulfatase activity
FDV79_22465	COG0745	RESPONSE REGULATOR receiver
FDV79_22480	COG2205	protein histidine kinase activity
FDV79_22480	COG2198	Histidine kinase
FDV79_22480	COG0784	Response regulator, receiver
FDV79_22485	COG1879	ABC-type sugar transport system periplasmic component
FDV79_22490	COG1803	Methylglyoxal synthase
FDV79_22495	COG0210	DNA helicase
FDV79_22500	COG1289	transmembrane transporter activity
FDV79_22535	COG4206	TonB-dependent receptor
FDV79_22550	COG0789	Transcriptional regulator
FDV79_22555	COG4604	ABC transporter, ATP-binding protein
FDV79_22560	COG4605	iron ion homeostasis
FDV79_22565	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FDV79_22570	COG4607	ABC-type enterochelin transport system periplasmic component
FDV79_22595	COG2847	Copper chaperone PCu(A)C
FDV79_22600	COG0443	Heat shock 70 kDa protein
FDV79_22635	COG0625	glutathione transferase activity
FDV79_22650	COG4160	amino acid transport
FDV79_22655	COG4215	(ABC) transporter
FDV79_22660	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FDV79_22665	COG1126	abc transporter atp-binding protein
FDV79_22695	COG1902	pentaerythritol trinitrate reductase activity
FDV79_22710	COG0109	protoheme IX farnesyltransferase activity
FDV79_22715	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
FDV79_22720	COG1845	cytochrome c oxidase, subunit III
FDV79_22725	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FDV79_22730	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
FDV79_22735	COG1028	Short-chain dehydrogenase reductase Sdr
FDV79_22745	COG1024	Enoyl-CoA hydratase
FDV79_22750	COG1024	Enoyl-CoA hydratase
FDV79_22765	COG0183	Belongs to the thiolase family
FDV79_22775	COG1960	acyl-CoA dehydrogenase activity
FDV79_22780	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FDV79_22785	COG1024	Enoyl-CoA hydratase
FDV79_22795	COG5413	integral membrane protein
FDV79_22810	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FDV79_22820	COG5001	Diguanylate cyclase
FDV79_22825	COG0513	Belongs to the DEAD box helicase family
FDV79_22830	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
FDV79_22845	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
FDV79_22865	COG0641	radical SAM
FDV79_22890	COG0840	transmembrane signaling receptor activity
FDV79_22895	COG1119	ATPase activity
FDV79_22900	COG2200	EAL domain
FDV79_22920	COG0513	Belongs to the DEAD box helicase family
FDV79_22925	COG0523	cobalamin synthesis protein
FDV79_22935	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
FDV79_22945	COG0133	tryptophan synthase activity
FDV79_22950	COG4628	conserved protein (DUF2132)
FDV79_22955	COG0513	Belongs to the DEAD box helicase family
FDV79_22960	COG3530	Putative quorum-sensing-regulated virulence factor
FDV79_22985	COG2154	pterin-4-alpha-carbinolamine dehydratase
FDV79_22990	COG3186	Phenylalanine-4-hydroxylase
FDV79_22995	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FDV79_23000	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FDV79_23040	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
FDV79_23045	COG1454	alcohol dehydrogenase
FDV79_23050	COG2133	pyrroloquinoline quinone binding
FDV79_23060	COG0783	Belongs to the Dps family
FDV79_23065	COG0840	transmembrane signaling receptor activity
FDV79_23075	COG1136	(ABC) transporter
FDV79_23075	COG0577	efflux transmembrane transporter activity
FDV79_23095	COG2199	diguanylate cyclase activity
FDV79_23110	COG3036	rescue of stalled ribosome
FDV79_23115	COG1278	Cold shock
FDV79_23150	COG0545	Peptidyl-prolyl cis-trans isomerase
FDV79_23155	COG0109	protoheme IX farnesyltransferase activity
FDV79_23160	COG1612	heme a metabolic process
FDV79_23185	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
FDV79_23200	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FDV79_23210	COG1280	lysine exporter protein (LysE YggA)
FDV79_23215	COG2207	Transcriptional regulator
FDV79_23245	COG0697	spore germination
FDV79_23270	COG2814	Major facilitator Superfamily
FDV79_23275	COG0583	DNA-binding transcription factor activity
FDV79_23280	COG5001	Diguanylate cyclase
FDV79_23285	COG0739	heme binding
FDV79_23325	COG0814	amino acid
FDV79_23345	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
FDV79_23350	COG1072	(Pantothenic acid kinase))
FDV79_23360	COG1063	alcohol dehydrogenase
FDV79_23365	COG2213	PTS system mannitol-specific
FDV79_23370	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FDV79_23390	COG0798	PFAM Bile acid sodium symporter
FDV79_23400	COG1881	PFAM PEBP family protein
FDV79_23410	COG2706	6-phosphogluconolactonase activity
FDV79_23420	COG0840	transmembrane signaling receptor activity
FDV79_23430	COG1131	(ABC) transporter
FDV79_23435	COG0842	Transport permease protein
FDV79_23450	COG3383	formate dehydrogenase (NAD+) activity
FDV79_23475	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FDV79_23495	COG2199	diguanylate cyclase activity
FDV79_23495	COG2203	Gaf domain
FDV79_23505	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FDV79_23515	COG2067	long-chain fatty acid transport protein
FDV79_23525	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FDV79_23535	COG1505	serine-type exopeptidase activity
FDV79_23540	COG0488	(ABC) transporter
FDV79_23545	COG0589	response to stress
FDV79_23550	COG2249	NAD(P)H dehydrogenase (quinone) activity
FDV79_23570	COG0366	Alpha amylase catalytic
FDV79_23580	COG4934	collagen metabolic process
FDV79_23595	COG0583	DNA-binding transcription factor activity
FDV79_23605	COG0783	Belongs to the Dps family
FDV79_23610	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
FDV79_23635	COG2211	Major facilitator Superfamily
FDV79_23640	COG3940	Belongs to the glycosyl hydrolase 43 family
FDV79_23645	COG2017	converts alpha-aldose to the beta-anomer
FDV79_23655	COG0561	phosphatase activity
FDV79_23660	COG2160	L-arabinose isomerase activity
FDV79_23670	COG1069	ribulokinase activity
FDV79_23675	COG2211	Major facilitator Superfamily
FDV79_23795	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FDV79_23800	COG0835	chemotaxis
FDV79_23800	COG0784	Response regulator, receiver
FDV79_23810	COG0748	coenzyme F420 binding
FDV79_23815	COG3721	Heme iron utilization protein
FDV79_23825	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
FDV79_23830	COG0811	peptide transport
FDV79_23835	COG0848	biopolymer transport protein
FDV79_23845	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FDV79_23850	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
FDV79_23895	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
FDV79_23900	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
FDV79_23905	COG3217	Mosc domain protein beta barrel domain protein
FDV79_23905	COG0633	Ferredoxin
FDV79_23905	COG0633	Ferredoxin
FDV79_23905	COG3217	Mosc domain protein beta barrel domain protein
FDV79_23915	COG0401	homolog of Blt101
FDV79_23925	COG0418	dihydroorotase activity
FDV79_23930	COG2354	Protein conserved in bacteria
FDV79_23960	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FDV79_23960	COG2207	Transcriptional regulator
FDV79_23965	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FDV79_24010	COG0513	Belongs to the DEAD box helicase family
FDV79_24020	COG0583	DNA-binding transcription factor activity
FDV79_24035	COG1902	pentaerythritol trinitrate reductase activity
FDV79_24040	COG1063	alcohol dehydrogenase
FDV79_24050	COG1028	Short-chain dehydrogenase reductase Sdr
FDV79_24065	COG3122	Protein conserved in bacteria
FDV79_24080	COG0583	DNA-binding transcription factor activity
FDV79_24090	COG0252	asparaginase activity
FDV79_24095	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
FDV79_24100	COG0574	Belongs to the PEP-utilizing enzyme family
FDV79_24100	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FDV79_24120	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
FDV79_24140	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FDV79_24160	COG3706	GGDEF domain
FDV79_24180	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FDV79_24210	COG3842	ATPase activity
FDV79_24260	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FDV79_24310	COG0583	DNA-binding transcription factor activity
FDV79_24320	COG4948	Mandelate Racemase Muconate Lactonizing
FDV79_24355	COG1342	Belongs to the UPF0251 family
FDV79_24365	COG3015	lipoprotein NlpE involved in copper resistance
FDV79_24375	COG3713	MltA-interacting MipA family protein
FDV79_24390	COG0583	DNA-binding transcription factor activity
FDV79_24420	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
FDV79_24430	COG1335	isochorismatase
FDV79_24440	COG0753	catalase activity
FDV79_24450	COG1349	DNA-binding transcription factor activity
FDV79_24455	COG0346	lactoylglutathione lyase activity
FDV79_24470	COG0583	DNA-binding transcription factor activity
FDV79_24480	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FDV79_24485	COG3537	Alpha-1,2-mannosidase
FDV79_24490	COG3537	Alpha-1,2-mannosidase
FDV79_24500	COG3537	Alpha-1,2-mannosidase
FDV79_24505	COG3537	Alpha-1,2-mannosidase
FDV79_24515	COG0737	Belongs to the 5'-nucleotidase family
FDV79_24525	COG1309	transcriptional regulator
FDV79_24545	COG1280	lysine exporter protein (LysE YggA)
FDV79_24560	COG0459	protein refolding
FDV79_24565	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
FDV79_24575	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FDV79_24600	COG1304	FMN binding
FDV79_24620	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FDV79_24625	COG1256	bacterial-type flagellum assembly
FDV79_24625	COG4786	Flagellar basal body rod
FDV79_24635	COG1706	bacterial-type flagellum-dependent cell motility
FDV79_24640	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
FDV79_24645	COG4786	Flagellar basal body rod
FDV79_24650	COG4787	bacterial-type flagellum-dependent cell motility
FDV79_24655	COG1749	Flagellar hook protein flgE
FDV79_24660	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
FDV79_24665	COG1558	bacterial-type flagellum-dependent cell motility
FDV79_24670	COG1815	bacterial-type flagellum-dependent cell motility
FDV79_24690	COG0741	lytic transglycosylase activity
FDV79_24700	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
FDV79_24720	COG1760	l-serine dehydratase
FDV79_24725	COG3104	oligopeptide transport
FDV79_24745	COG0583	DNA-binding transcription factor activity
FDV79_24760	COG2866	Carboxypeptidase
FDV79_24765	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FDV79_24775	COG2990	Protein conserved in bacteria
FDV79_24800	COG3842	ATPase activity
FDV79_24810	COG1840	ABC-type Fe3 transport system, periplasmic component
FDV79_24825	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FDV79_24830	COG1609	Transcriptional regulator
FDV79_24860	COG3240	lipase activity
FDV79_24870	COG1136	(ABC) transporter
FDV79_24870	COG0577	efflux transmembrane transporter activity
FDV79_24875	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FDV79_24880	COG2067	long-chain fatty acid transport protein
FDV79_24890	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
FDV79_24905	COG1011	Hydrolase
FDV79_24945	COG0110	maltose O-acetyltransferase activity
FDV79_24950	COG1765	OsmC-like protein
FDV79_24955	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FDV79_24955	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FDV79_24970	COG3046	protein related to deoxyribodipyrimidine photolyase
FDV79_24975	COG0415	Belongs to the DNA photolyase family
FDV79_24980	COG3706	GGDEF domain
FDV79_24995	COG0840	transmembrane signaling receptor activity
FDV79_25000	COG3706	GGDEF domain
FDV79_25015	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FDV79_25035	COG3033	Beta-eliminating lyase
FDV79_25045	COG0579	oxidoreductase
FDV79_25065	COG1114	Component of the transport system for branched-chain amino acids
FDV79_25070	COG3706	GGDEF domain
FDV79_25115	COG0583	DNA-binding transcription factor activity
FDV79_25120	COG0189	ligase activity
FDV79_25125	COG4067	protein conserved in archaea
FDV79_25125	COG0189	ligase activity
FDV79_25135	COG1166	arginine decarboxylase activity
FDV79_25140	COG0010	Belongs to the arginase family
FDV79_25145	COG2814	Major facilitator Superfamily
FDV79_25150	COG1770	oligopeptidase
FDV79_25165	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FDV79_25170	COG1121	(ABC) transporter
FDV79_25175	COG0803	Belongs to the bacterial solute-binding protein 9 family
FDV79_25215	COG0848	biopolymer transport protein
FDV79_25220	COG0811	peptide transport
FDV79_25225	COG0811	peptide transport
FDV79_25245	COG0745	RESPONSE REGULATOR receiver
FDV79_25250	COG0039	L-malate dehydrogenase activity
FDV79_25255	COG0584	glycerophosphoryl diester phosphodiesterase
FDV79_25265	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FDV79_25330	COG1901	pseudouridine methyltransferase
FDV79_25335	COG0312	modulator of DNA gyrase
FDV79_25340	COG0312	modulator of DNA gyrase
FDV79_25350	COG0351	phosphomethylpyrimidine kinase
FDV79_25355	COG1116	anion transmembrane transporter activity
FDV79_25360	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FDV79_25365	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FDV79_25370	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
FDV79_25375	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
FDV79_25380	COG0352	thiamine-phosphate diphosphorylase activity
FDV79_25390	COG0243	molybdopterin cofactor binding
FDV79_25395	COG3005	denitrification pathway
FDV79_25405	COG1028	Short-chain dehydrogenase reductase Sdr
FDV79_25420	COG0456	acetyltransferase
FDV79_25440	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FDV79_25445	COG1929	Belongs to the glycerate kinase type-1 family
FDV79_25450	COG2610	gluconate transmembrane transporter activity