locus-tag class description BGM07_000020 PF00005 ABC transporter BGM07_000020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BGM07_000025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BGM07_000025 PF00005 ABC transporter BGM07_000035 PF08719 Domain of unknown function (DUF1768) BGM07_000035 PF00925 GTP cyclohydrolase II BGM07_000045 PF00072 Response regulator receiver domain BGM07_000045 PF01627 Hpt domain BGM07_000045 PF00512 His Kinase A (phospho-acceptor) domain BGM07_000045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_000045 PF00672 HAMP domain BGM07_000045 PF17149 Periplasmic sensor domain found in signal transduction proteins BGM07_000055 PF01709 Transcriptional regulator BGM07_000060 PF01098 Cell cycle protein BGM07_000075 PF00005 ABC transporter BGM07_000095 PF06580 Histidine kinase BGM07_000095 PF07694 5TMR of 5TMR-LYT BGM07_000095 PF13492 GAF domain BGM07_000095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_000100 PF04397 LytTr DNA-binding domain BGM07_000100 PF00072 Response regulator receiver domain BGM07_000110 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BGM07_000115 PF17200 Single Cache domain 2 BGM07_000115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGM07_000115 PF00672 HAMP domain BGM07_000130 PF00132 Bacterial transferase hexapeptide (six repeats) BGM07_000140 PF03616 Sodium/glutamate symporter BGM07_000150 PF00005 ABC transporter BGM07_000155 PF00392 Bacterial regulatory proteins, gntR family BGM07_000155 PF00155 Aminotransferase class I and II BGM07_000160 PF03616 Sodium/glutamate symporter BGM07_000175 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BGM07_000190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_000190 PF03466 LysR substrate binding domain BGM07_000195 PF17954 Quercetinase C-terminal cupin domain BGM07_000195 PF02678 Pirin BGM07_000200 PF07681 DoxX BGM07_000210 PF06029 AlkA N-terminal domain BGM07_000210 PF00730 HhH-GPD superfamily base excision DNA repair protein BGM07_000215 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BGM07_000215 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BGM07_000230 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BGM07_000240 PF03600 Citrate transporter BGM07_000260 PF00704 Glycosyl hydrolases family 18 BGM07_000260 PF08329 Chitinase A, N-terminal domain BGM07_000270 PF06865 Pyrimidine/purine nucleoside phosphorylase BGM07_000280 PF00563 EAL domain BGM07_000280 PF00990 Diguanylate cyclase, GGDEF domain BGM07_000290 PF01554 MatE BGM07_000295 PF00849 RNA pseudouridylate synthase BGM07_000310 PF03466 LysR substrate binding domain BGM07_000310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_000325 PF17152 Periplasmic sensor domain BGM07_000325 PF00990 Diguanylate cyclase, GGDEF domain BGM07_000335 PF00756 Putative esterase BGM07_000340 PF08240 Alcohol dehydrogenase GroES-like domain BGM07_000340 PF00107 Zinc-binding dehydrogenase BGM07_000345 PF00797 N-acetyltransferase BGM07_000350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_000350 PF03466 LysR substrate binding domain BGM07_000365 PF01614 Bacterial transcriptional regulator BGM07_000365 PF09339 IclR helix-turn-helix domain BGM07_000375 PF10688 Bacterial inner membrane protein BGM07_000380 PF07883 Cupin domain BGM07_000395 PF00294 pfkB family carbohydrate kinase BGM07_000400 PF01081 KDPG and KHG aldolase BGM07_000415 PF13229 Right handed beta helix region BGM07_000420 PF00474 Sodium:solute symporter family BGM07_000425 PF14583 Oligogalacturonate lyase BGM07_000430 PF08021 Siderophore-interacting FAD-binding domain BGM07_000430 PF04954 Siderophore-interacting protein BGM07_000435 PF01810 LysE type translocator BGM07_000440 PF01037 Lrp/AsnC ligand binding domain BGM07_000445 PF18416 N-acetylglucosamine binding protein domain 2 BGM07_000445 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading BGM07_000460 PF13599 Pentapeptide repeats (9 copies) BGM07_000465 PF03922 OmpW family BGM07_000470 PF13533 Biotin-lipoyl like BGM07_000475 PF07690 Major Facilitator Superfamily BGM07_000485 PF12706 Beta-lactamase superfamily domain BGM07_000495 PF01204 Trehalase BGM07_000500 PF01661 Macro domain BGM07_000505 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BGM07_000510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_000510 PF03466 LysR substrate binding domain BGM07_000520 PF03466 LysR substrate binding domain BGM07_000520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_000535 PF13419 Haloacid dehalogenase-like hydrolase BGM07_000560 PF13556 PucR C-terminal helix-turn-helix domain BGM07_000560 PF05651 Putative sugar diacid recognition BGM07_000560 PF17853 GGDEF-like domain BGM07_000565 PF02447 GntP family permease BGM07_000570 PF02595 Glycerate kinase family BGM07_000575 PF00155 Aminotransferase class I and II BGM07_000575 PF00392 Bacterial regulatory proteins, gntR family BGM07_000595 PF00583 Acetyltransferase (GNAT) family BGM07_000620 PF03264 NapC/NirT cytochrome c family, N-terminal region BGM07_000625 PF18364 Molybdopterin oxidoreductase N-terminal domain BGM07_000625 PF01568 Molydopterin dinucleotide binding domain BGM07_000625 PF00384 Molybdopterin oxidoreductase BGM07_000635 PF02581 Thiamine monophosphate synthase BGM07_000640 PF02110 Hydroxyethylthiazole kinase family BGM07_000645 PF03070 TENA/THI-4/PQQC family BGM07_000650 PF09084 NMT1/THI5 like BGM07_000655 PF00528 Binding-protein-dependent transport system inner membrane component BGM07_000660 PF00005 ABC transporter BGM07_000665 PF08543 Phosphomethylpyrimidine kinase BGM07_000670 PF01523 Putative modulator of DNA gyrase BGM07_000675 PF01523 Putative modulator of DNA gyrase BGM07_000680 PF04013 Putative SAM-dependent RNA methyltransferase BGM07_000730 PF10928 Protein of unknown function (DUF2810) BGM07_000735 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BGM07_000735 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BGM07_000745 PF03009 Glycerophosphoryl diester phosphodiesterase family BGM07_000755 PF00072 Response regulator receiver domain BGM07_000755 PF00486 Transcriptional regulatory protein, C terminal BGM07_000760 PF00512 His Kinase A (phospho-acceptor) domain BGM07_000760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_000760 PF16750 Sensor domain of 2-component histidine kinase BGM07_000760 PF00672 HAMP domain BGM07_000765 PF07715 TonB-dependent Receptor Plug Domain BGM07_000765 PF00593 TonB dependent receptor BGM07_000775 PF01618 MotA/TolQ/ExbB proton channel family BGM07_000780 PF01618 MotA/TolQ/ExbB proton channel family BGM07_000785 PF02472 Biopolymer transport protein ExbD/TolR BGM07_000830 PF00005 ABC transporter BGM07_000835 PF00950 ABC 3 transport family BGM07_000850 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BGM07_000850 PF00326 Prolyl oligopeptidase family BGM07_000855 PF07690 Major Facilitator Superfamily BGM07_000860 PF00491 Arginase family BGM07_000865 PF17810 Arginine decarboxylase helical bundle domain BGM07_000865 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BGM07_000865 PF17944 Arginine decarboxylase C-terminal helical extension BGM07_000870 PF00753 Metallo-beta-lactamase superfamily BGM07_000875 PF18030 RimK PreATP-grasp domain BGM07_000875 PF08443 RimK-like ATP-grasp domain BGM07_000880 PF18030 RimK PreATP-grasp domain BGM07_000880 PF08443 RimK-like ATP-grasp domain BGM07_000890 PF03466 LysR substrate binding domain BGM07_000890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_000915 PF00232 Glycosyl hydrolase family 1 BGM07_000930 PF00512 His Kinase A (phospho-acceptor) domain BGM07_000930 PF02743 Cache domain BGM07_000930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_000935 PF00158 Sigma-54 interaction domain BGM07_000935 PF00072 Response regulator receiver domain BGM07_000935 PF02954 Bacterial regulatory protein, Fis family BGM07_000940 PF05230 MASE2 domain BGM07_000940 PF00990 Diguanylate cyclase, GGDEF domain BGM07_000945 PF05525 Branched-chain amino acid transport protein BGM07_000960 PF01266 FAD dependent oxidoreductase BGM07_000970 PF01212 Beta-eliminating lyase BGM07_000985 PF07670 Nucleoside recognition BGM07_000985 PF01773 Na+ dependent nucleoside transporter N-terminus BGM07_000985 PF07662 Na+ dependent nucleoside transporter C-terminus BGM07_000995 PF13532 2OG-Fe(II) oxygenase superfamily BGM07_001000 PF00990 Diguanylate cyclase, GGDEF domain BGM07_001000 PF05230 MASE2 domain BGM07_001005 PF12729 Four helix bundle sensory module for signal transduction BGM07_001005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGM07_001005 PF00672 HAMP domain BGM07_001020 PF00990 Diguanylate cyclase, GGDEF domain BGM07_001025 PF00875 DNA photolyase BGM07_001025 PF03441 FAD binding domain of DNA photolyase BGM07_001030 PF04244 Deoxyribodipyrimidine photo-lyase-related protein BGM07_001035 PF00919 Uncharacterized protein family UPF0004 BGM07_001035 PF04055 Radical SAM superfamily BGM07_001045 PF01641 SelR domain BGM07_001045 PF01625 Peptide methionine sulfoxide reductase BGM07_001050 PF02566 OsmC-like protein BGM07_001055 PF12464 Maltose acetyltransferase BGM07_001055 PF14602 Hexapeptide repeat of succinyl-transferase BGM07_001110 PF01625 Peptide methionine sulfoxide reductase BGM07_001110 PF01641 SelR domain BGM07_001115 PF02566 OsmC-like protein BGM07_001120 PF12464 Maltose acetyltransferase BGM07_001120 PF14602 Hexapeptide repeat of succinyl-transferase BGM07_001155 PF03466 LysR substrate binding domain BGM07_001155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_001160 PF13419 Haloacid dehalogenase-like hydrolase BGM07_001175 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) BGM07_001180 PF00194 Eukaryotic-type carbonic anhydrase BGM07_001185 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BGM07_001190 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BGM07_001195 PF12704 MacB-like periplasmic core domain BGM07_001195 PF00005 ABC transporter BGM07_001195 PF02687 FtsX-like permease family BGM07_001200 PF02321 Outer membrane efflux protein BGM07_001205 PF00657 GDSL-like Lipase/Acylhydrolase BGM07_001220 PF03611 PTS system sugar-specific permease component BGM07_001230 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BGM07_001235 PF00356 Bacterial regulatory proteins, lacI family BGM07_001240 PF13419 Haloacid dehalogenase-like hydrolase BGM07_001250 PF00266 Aminotransferase class-V BGM07_001265 PF00005 ABC transporter BGM07_001270 PF00528 Binding-protein-dependent transport system inner membrane component BGM07_001275 PF07702 UTRA domain BGM07_001275 PF00392 Bacterial regulatory proteins, gntR family BGM07_001290 PF04393 Protein of unknown function (DUF535) BGM07_001305 PF01266 FAD dependent oxidoreductase BGM07_001310 PF18027 Cytosolic carboxypeptidase N-terminal domain BGM07_001310 PF00246 Zinc carboxypeptidase BGM07_001315 PF00691 OmpA family BGM07_001315 PF01389 OmpA-like transmembrane domain BGM07_001320 PF03466 LysR substrate binding domain BGM07_001320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_001330 PF03466 LysR substrate binding domain BGM07_001330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_001340 PF00854 POT family BGM07_001345 PF03315 Serine dehydratase beta chain BGM07_001345 PF03313 Serine dehydratase alpha chain BGM07_001365 PF08264 Anticodon-binding domain of tRNA BGM07_001365 PF00133 tRNA synthetases class I (I, L, M and V) BGM07_001370 PF01464 Transglycosylase SLT domain BGM07_001390 PF00460 Flagella basal body rod protein BGM07_001395 PF00460 Flagella basal body rod protein BGM07_001395 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BGM07_001400 PF03963 Flagellar hook capping protein - N-terminal region BGM07_001400 PF13861 FlgD Tudor-like domain BGM07_001400 PF13860 FlgD Ig-like domain BGM07_001405 PF07559 Flagellar basal body protein FlaE BGM07_001405 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BGM07_001405 PF00460 Flagella basal body rod protein BGM07_001410 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BGM07_001410 PF00460 Flagella basal body rod protein BGM07_001415 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BGM07_001415 PF00460 Flagella basal body rod protein BGM07_001420 PF02107 Flagellar L-ring protein BGM07_001425 PF02119 Flagellar P-ring protein BGM07_001430 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BGM07_001430 PF10135 Rod binding protein BGM07_001435 PF00460 Flagella basal body rod protein BGM07_001435 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BGM07_001440 PF00669 Bacterial flagellin N-terminal helical region BGM07_001465 PF01070 FMN-dependent dehydrogenase BGM07_001490 PF00581 Rhodanese-like domain BGM07_001495 PF00166 Chaperonin 10 Kd subunit BGM07_001500 PF00118 TCP-1/cpn60 chaperonin family BGM07_001515 PF01810 LysE type translocator BGM07_001520 PF03466 LysR substrate binding domain BGM07_001520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_001535 PF00440 Bacterial regulatory proteins, tetR family BGM07_001535 PF08359 YsiA-like protein, C-terminal region BGM07_001545 PF02872 5'-nucleotidase, C-terminal domain BGM07_001545 PF00149 Calcineurin-like phosphoesterase BGM07_001550 PF03060 Nitronate monooxygenase BGM07_001555 PF17678 Glycosyl hydrolase family 92 N-terminal domain BGM07_001555 PF07971 Glycosyl hydrolase family 92 BGM07_001560 PF17678 Glycosyl hydrolase family 92 N-terminal domain BGM07_001560 PF07971 Glycosyl hydrolase family 92 BGM07_001570 PF17678 Glycosyl hydrolase family 92 N-terminal domain BGM07_001570 PF07971 Glycosyl hydrolase family 92 BGM07_001575 PF07971 Glycosyl hydrolase family 92 BGM07_001575 PF17678 Glycosyl hydrolase family 92 N-terminal domain BGM07_001590 PF01625 Peptide methionine sulfoxide reductase BGM07_001590 PF01641 SelR domain BGM07_001595 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BGM07_001600 PF08220 DeoR-like helix-turn-helix domain BGM07_001600 PF00455 DeoR C terminal sensor domain BGM07_001625 PF00857 Isochorismatase family BGM07_001635 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BGM07_001635 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BGM07_001660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_001660 PF03466 LysR substrate binding domain BGM07_001665 PF00691 OmpA family BGM07_001665 PF01389 OmpA-like transmembrane domain BGM07_001675 PF06629 MltA-interacting protein MipA BGM07_001680 PF17185 NlpE C-terminal OB domain BGM07_001680 PF04170 NlpE N-terminal domain BGM07_001690 PF02001 Protein of unknown function DUF134 BGM07_001715 PF00009 Elongation factor Tu GTP binding domain BGM07_001715 PF03764 Elongation factor G, domain IV BGM07_001715 PF14492 Elongation Factor G, domain II BGM07_001715 PF03144 Elongation factor Tu domain 2 BGM07_001715 PF00679 Elongation factor G C-terminus BGM07_001725 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BGM07_001725 PF13378 Enolase C-terminal domain-like BGM07_001735 PF03466 LysR substrate binding domain BGM07_001735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_001750 PF00376 MerR family regulatory protein BGM07_001750 PF09278 MerR, DNA binding BGM07_001780 PF13091 PLD-like domain BGM07_001790 PF13533 Biotin-lipoyl like BGM07_001795 PF00873 AcrB/AcrD/AcrF family BGM07_001830 PF00005 ABC transporter BGM07_001830 PF08402 TOBE domain BGM07_001855 PF00392 Bacterial regulatory proteins, gntR family BGM07_001855 PF07702 UTRA domain BGM07_001860 PF02028 BCCT, betaine/carnitine/choline family transporter BGM07_001865 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BGM07_001865 PF02837 Glycosyl hydrolases family 2, sugar binding domain BGM07_001865 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 BGM07_001865 PF00703 Glycosyl hydrolases family 2 BGM07_001870 PF00196 Bacterial regulatory proteins, luxR family BGM07_001880 PF00990 Diguanylate cyclase, GGDEF domain BGM07_001880 PF07694 5TMR of 5TMR-LYT BGM07_001895 PF00873 AcrB/AcrD/AcrF family BGM07_001900 PF13533 Biotin-lipoyl like BGM07_001905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_001905 PF03466 LysR substrate binding domain BGM07_001915 PF13416 Bacterial extracellular solute-binding protein BGM07_001920 PF00579 tRNA synthetases class I (W and Y) BGM07_001935 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BGM07_001935 PF00391 PEP-utilising enzyme, mobile domain BGM07_001935 PF02896 PEP-utilising enzyme, TIM barrel domain BGM07_001940 PF03618 Kinase/pyrophosphorylase BGM07_001945 PF00710 Asparaginase, N-terminal BGM07_001945 PF17763 Glutaminase/Asparaginase C-terminal domain BGM07_001955 PF03466 LysR substrate binding domain BGM07_001955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_001970 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) BGM07_001980 PF12833 Helix-turn-helix domain BGM07_001980 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BGM07_001995 PF08240 Alcohol dehydrogenase GroES-like domain BGM07_001995 PF00107 Zinc-binding dehydrogenase BGM07_002000 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BGM07_002010 PF03466 LysR substrate binding domain BGM07_002010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_002015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_002015 PF03466 LysR substrate binding domain BGM07_002025 PF00271 Helicase conserved C-terminal domain BGM07_002025 PF00270 DEAD/DEAH box helicase BGM07_002050 PF00155 Aminotransferase class I and II BGM07_002055 PF01497 Periplasmic binding protein BGM07_002055 PF12833 Helix-turn-helix domain BGM07_002110 PF01872 RibD C-terminal domain BGM07_002115 PF02909 Tetracyclin repressor-like, C-terminal domain BGM07_002115 PF00440 Bacterial regulatory proteins, tetR family BGM07_002120 PF02798 Glutathione S-transferase, N-terminal domain BGM07_002135 PF07943 Penicillin-binding protein 5, C-terminal domain BGM07_002135 PF00768 D-alanyl-D-alanine carboxypeptidase BGM07_002155 PF00462 Glutaredoxin BGM07_002155 PF08534 Redoxin BGM07_002160 PF00962 Adenosine/AMP deaminase BGM07_002175 PF00313 'Cold-shock' DNA-binding domain BGM07_002180 PF02678 Pirin BGM07_002180 PF05726 Pirin C-terminal cupin domain BGM07_002185 PF01734 Patatin-like phospholipase BGM07_002195 PF01047 MarR family BGM07_002210 PF07690 Major Facilitator Superfamily BGM07_002220 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BGM07_002225 PF08019 Phosphoethanolamine transferase EptA/EptB BGM07_002225 PF00884 Sulfatase BGM07_002230 PF01219 Prokaryotic diacylglycerol kinase BGM07_002240 PF00512 His Kinase A (phospho-acceptor) domain BGM07_002240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_002240 PF00672 HAMP domain BGM07_002245 PF00486 Transcriptional regulatory protein, C terminal BGM07_002245 PF00072 Response regulator receiver domain BGM07_002250 PF00106 short chain dehydrogenase BGM07_002265 PF01323 DSBA-like thioredoxin domain BGM07_002280 PF00255 Glutathione peroxidase BGM07_002285 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BGM07_002295 PF07690 Major Facilitator Superfamily BGM07_002305 PF01966 HD domain BGM07_002315 PF07969 Amidohydrolase family BGM07_002320 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BGM07_002325 PF00571 CBS domain BGM07_002325 PF01769 Divalent cation transporter BGM07_002325 PF03448 MgtE intracellular N domain BGM07_002330 PF03109 ABC1 family BGM07_002340 PF00155 Aminotransferase class I and II BGM07_002340 PF00392 Bacterial regulatory proteins, gntR family BGM07_002345 PF13520 Amino acid permease BGM07_002350 PF01037 Lrp/AsnC ligand binding domain BGM07_002350 PF13404 AsnC-type helix-turn-helix domain BGM07_002355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_002355 PF03466 LysR substrate binding domain BGM07_002370 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BGM07_002370 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BGM07_002375 PF00072 Response regulator receiver domain BGM07_002375 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BGM07_002375 PF00512 His Kinase A (phospho-acceptor) domain BGM07_002375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_002375 PF00672 HAMP domain BGM07_002375 PF01627 Hpt domain BGM07_002380 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BGM07_002385 PF01554 MatE BGM07_002390 PF04363 Protein of unknown function (DUF496) BGM07_002400 PF04337 Protein of unknown function, DUF480 BGM07_002405 PF01541 GIY-YIG catalytic domain BGM07_002410 PF13407 Periplasmic binding protein domain BGM07_002415 PF00072 Response regulator receiver domain BGM07_002415 PF09308 LuxQ, periplasmic BGM07_002415 PF00512 His Kinase A (phospho-acceptor) domain BGM07_002415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_002425 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BGM07_002425 PF00529 HlyD membrane-fusion protein of T1SS BGM07_002445 PF01037 Lrp/AsnC ligand binding domain BGM07_002475 PF07549 SecD/SecF GG Motif BGM07_002475 PF13721 SecD export protein N-terminal TM region BGM07_002475 PF02355 Protein export membrane protein BGM07_002480 PF07549 SecD/SecF GG Motif BGM07_002480 PF02355 Protein export membrane protein BGM07_002490 PF01810 LysE type translocator BGM07_002495 PF00106 short chain dehydrogenase BGM07_002500 PF02803 Thiolase, C-terminal domain BGM07_002500 PF00108 Thiolase, N-terminal domain BGM07_002510 PF00561 alpha/beta hydrolase fold BGM07_002510 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus BGM07_002520 PF03264 NapC/NirT cytochrome c family, N-terminal region BGM07_002525 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) BGM07_002530 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BGM07_002530 PF00384 Molybdopterin oxidoreductase BGM07_002530 PF01568 Molydopterin dinucleotide binding domain BGM07_002540 PF12838 4Fe-4S dicluster domain BGM07_002540 PF13187 4Fe-4S dicluster domain BGM07_002545 PF00672 HAMP domain BGM07_002545 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term BGM07_002545 PF07730 Histidine kinase BGM07_002545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_002550 PF00196 Bacterial regulatory proteins, luxR family BGM07_002550 PF00072 Response regulator receiver domain BGM07_002565 PF01546 Peptidase family M20/M25/M40 BGM07_002565 PF07687 Peptidase dimerisation domain BGM07_002570 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BGM07_002575 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BGM07_002580 PF00873 AcrB/AcrD/AcrF family BGM07_002585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGM07_002585 PF00672 HAMP domain BGM07_002585 PF12729 Four helix bundle sensory module for signal transduction BGM07_002590 PF00472 RF-1 domain BGM07_002595 PF13419 Haloacid dehalogenase-like hydrolase BGM07_002600 PF01389 OmpA-like transmembrane domain BGM07_002600 PF00691 OmpA family BGM07_002605 PF00793 DAHP synthetase I family BGM07_002610 PF07690 Major Facilitator Superfamily BGM07_002615 PF08447 PAS fold BGM07_002615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGM07_002620 PF00456 Transketolase, thiamine diphosphate binding domain BGM07_002620 PF02779 Transketolase, pyrimidine binding domain BGM07_002620 PF02780 Transketolase, C-terminal domain BGM07_002625 PF00923 Transaldolase/Fructose-6-phosphate aldolase BGM07_002645 PF08329 Chitinase A, N-terminal domain BGM07_002645 PF00704 Glycosyl hydrolases family 18 BGM07_002650 PF03707 Bacterial signalling protein N terminal repeat BGM07_002650 PF00563 EAL domain BGM07_002650 PF00990 Diguanylate cyclase, GGDEF domain BGM07_002655 PF00581 Rhodanese-like domain BGM07_002670 PF00899 ThiF family BGM07_002675 PF00994 Probable molybdopterin binding domain BGM07_002675 PF03453 MoeA N-terminal region (domain I and II) BGM07_002675 PF03454 MoeA C-terminal region (domain IV) BGM07_002680 PF01227 GTP cyclohydrolase I BGM07_002685 PF01566 Natural resistance-associated macrophage protein BGM07_002695 PF00654 Voltage gated chloride channel BGM07_002710 PF00248 Aldo/keto reductase family BGM07_002715 PF00072 Response regulator receiver domain BGM07_002725 PF01256 Carbohydrate kinase BGM07_002725 PF03853 YjeF-related protein N-terminus BGM07_002730 PF00478 IMP dehydrogenase / GMP reductase domain BGM07_002735 PF00501 AMP-binding enzyme BGM07_002735 PF13193 AMP-binding enzyme C-terminal domain BGM07_002740 PF01012 Electron transfer flavoprotein domain BGM07_002740 PF00766 Electron transfer flavoprotein FAD-binding domain BGM07_002745 PF01012 Electron transfer flavoprotein domain BGM07_002760 PF00005 ABC transporter BGM07_002760 PF12399 Branched-chain amino acid ATP-binding cassette transporter BGM07_002785 PF00005 ABC transporter BGM07_002790 PF00501 AMP-binding enzyme BGM07_002790 PF14535 AMP-binding enzyme C-terminal domain BGM07_002795 PF05724 Thiopurine S-methyltransferase (TPMT) BGM07_002805 PF00034 Cytochrome c BGM07_002815 PF13411 MerR HTH family regulatory protein BGM07_002820 PF02627 Carboxymuconolactone decarboxylase family BGM07_002825 PF02567 Phenazine biosynthesis-like protein BGM07_002835 PF02322 Cytochrome bd terminal oxidase subunit II BGM07_002840 PF01654 Cytochrome bd terminal oxidase subunit I BGM07_002845 PF00392 Bacterial regulatory proteins, gntR family BGM07_002845 PF00155 Aminotransferase class I and II BGM07_002850 PF14602 Hexapeptide repeat of succinyl-transferase BGM07_002850 PF12464 Maltose acetyltransferase BGM07_002855 PF12794 Mechanosensitive ion channel inner membrane domain 1 BGM07_002855 PF12795 Mechanosensitive ion channel porin domain BGM07_002855 PF00924 Mechanosensitive ion channel BGM07_002870 PF00512 His Kinase A (phospho-acceptor) domain BGM07_002870 PF00672 HAMP domain BGM07_002870 PF01627 Hpt domain BGM07_002870 PF00072 Response regulator receiver domain BGM07_002870 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BGM07_002870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_002875 PF00682 HMGL-like BGM07_002880 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BGM07_002880 PF00289 Biotin carboxylase, N-terminal domain BGM07_002880 PF02785 Biotin carboxylase C-terminal domain BGM07_002885 PF00378 Enoyl-CoA hydratase/isomerase BGM07_002890 PF01039 Carboxyl transferase domain BGM07_002895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BGM07_002895 PF02770 Acyl-CoA dehydrogenase, middle domain BGM07_002895 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BGM07_002900 PF09278 MerR, DNA binding BGM07_002900 PF00376 MerR family regulatory protein BGM07_002905 PF00108 Thiolase, N-terminal domain BGM07_002905 PF02803 Thiolase, C-terminal domain BGM07_002910 PF00171 Aldehyde dehydrogenase family BGM07_002915 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BGM07_002915 PF02770 Acyl-CoA dehydrogenase, middle domain BGM07_002915 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BGM07_002920 PF00378 Enoyl-CoA hydratase/isomerase BGM07_002930 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BGM07_002930 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BGM07_002945 PF00990 Diguanylate cyclase, GGDEF domain BGM07_002945 PF17151 Periplasmic sensor domain BGM07_002950 PF13977 BetI-type transcriptional repressor, C-terminal BGM07_002950 PF00440 Bacterial regulatory proteins, tetR family BGM07_002955 PF00171 Aldehyde dehydrogenase family BGM07_002960 PF00732 GMC oxidoreductase BGM07_002960 PF05199 GMC oxidoreductase BGM07_002965 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BGM07_002970 PF00528 Binding-protein-dependent transport system inner membrane component BGM07_002975 PF00005 ABC transporter BGM07_002975 PF00571 CBS domain BGM07_002980 PF00881 Nitroreductase family BGM07_002990 PF01145 SPFH domain / Band 7 family BGM07_002990 PF16200 C-terminal region of band_7 BGM07_003000 PF03707 Bacterial signalling protein N terminal repeat BGM07_003000 PF00563 EAL domain BGM07_003000 PF13188 PAS domain BGM07_003000 PF00990 Diguanylate cyclase, GGDEF domain BGM07_003005 PF03150 Di-haem cytochrome c peroxidase BGM07_003005 PF00034 Cytochrome c BGM07_003010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_003010 PF09308 LuxQ, periplasmic BGM07_003010 PF00512 His Kinase A (phospho-acceptor) domain BGM07_003010 PF00072 Response regulator receiver domain BGM07_003025 PF04116 Fatty acid hydroxylase superfamily BGM07_003070 PF01048 Phosphorylase superfamily BGM07_003075 PF00563 EAL domain BGM07_003075 PF00990 Diguanylate cyclase, GGDEF domain BGM07_003080 PF05025 RbsD / FucU transport protein family BGM07_003085 PF00005 ABC transporter BGM07_003090 PF02653 Branched-chain amino acid transport system / permease component BGM07_003095 PF13407 Periplasmic binding protein domain BGM07_003100 PF00294 pfkB family carbohydrate kinase BGM07_003105 PF00356 Bacterial regulatory proteins, lacI family BGM07_003115 PF04973 Nicotinamide mononucleotide transporter BGM07_003120 PF01048 Phosphorylase superfamily BGM07_003130 PF01497 Periplasmic binding protein BGM07_003135 PF01032 FecCD transport family BGM07_003140 PF01032 FecCD transport family BGM07_003145 PF00005 ABC transporter BGM07_003150 PF13411 MerR HTH family regulatory protein BGM07_003165 PF00593 TonB dependent receptor BGM07_003165 PF07715 TonB-dependent Receptor Plug Domain BGM07_003200 PF12805 FUSC-like inner membrane protein yccS BGM07_003205 PF12462 DNA helicase IV / RNA helicase N terminal BGM07_003205 PF13361 UvrD-like helicase C-terminal domain BGM07_003205 PF00580 UvrD/REP helicase N-terminal domain BGM07_003210 PF02142 MGS-like domain BGM07_003215 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BGM07_003220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_003220 PF00512 His Kinase A (phospho-acceptor) domain BGM07_003220 PF00072 Response regulator receiver domain BGM07_003220 PF00672 HAMP domain BGM07_003220 PF01627 Hpt domain BGM07_003235 PF00486 Transcriptional regulatory protein, C terminal BGM07_003235 PF00072 Response regulator receiver domain BGM07_003245 PF00884 Sulfatase BGM07_003250 PF00884 Sulfatase BGM07_003260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_003260 PF03466 LysR substrate binding domain BGM07_003265 PF00884 Sulfatase BGM07_003270 PF13186 Iron-sulfur cluster-binding domain BGM07_003270 PF04055 Radical SAM superfamily BGM07_003275 PF17863 AAA lid domain BGM07_003275 PF07726 ATPase family associated with various cellular activities (AAA) BGM07_003290 PF00092 von Willebrand factor type A domain BGM07_003305 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BGM07_003310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_003310 PF03466 LysR substrate binding domain BGM07_003315 PF00781 Diacylglycerol kinase catalytic domain BGM07_003320 PF04076 Bacterial OB fold (BOF) protein BGM07_003340 PF13186 Iron-sulfur cluster-binding domain BGM07_003340 PF04055 Radical SAM superfamily BGM07_003350 PF18081 Fanconi anemia-associated nuclease SAP domain BGM07_003350 PF08774 VRR-NUC domain BGM07_003365 PF01435 Peptidase family M48 BGM07_003370 PF04011 LemA family BGM07_003375 PF03606 C4-dicarboxylate anaerobic carrier BGM07_003395 PF00072 Response regulator receiver domain BGM07_003395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_003400 PF00155 Aminotransferase class I and II BGM07_003405 PF01926 50S ribosome-binding GTPase BGM07_003415 PF04151 Bacterial pre-peptidase C-terminal domain BGM07_003415 PF01752 Collagenase BGM07_003415 PF08453 Peptidase family M9 N-terminal BGM07_003425 PF12833 Helix-turn-helix domain BGM07_003430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_003430 PF03466 LysR substrate binding domain BGM07_003450 PF04972 BON domain BGM07_003450 PF00263 Bacterial type II and III secretion system protein BGM07_003450 PF13629 Pilus formation protein N terminal region BGM07_003465 PF00437 Type II/IV secretion system protein BGM07_003500 PF05736 OprF membrane domain BGM07_003500 PF00691 OmpA family BGM07_003510 PF03466 LysR substrate binding domain BGM07_003510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_003515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_003515 PF03466 LysR substrate binding domain BGM07_003525 PF09456 RcsC Alpha-Beta-Loop (ABL) BGM07_003525 PF00072 Response regulator receiver domain BGM07_003525 PF00512 His Kinase A (phospho-acceptor) domain BGM07_003525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_003530 PF13188 PAS domain BGM07_003530 PF03707 Bacterial signalling protein N terminal repeat BGM07_003530 PF00990 Diguanylate cyclase, GGDEF domain BGM07_003530 PF00563 EAL domain BGM07_003535 PF00072 Response regulator receiver domain BGM07_003535 PF00196 Bacterial regulatory proteins, luxR family BGM07_003540 PF00990 Diguanylate cyclase, GGDEF domain BGM07_003550 PF00072 Response regulator receiver domain BGM07_003550 PF00196 Bacterial regulatory proteins, luxR family BGM07_003570 PF00072 Response regulator receiver domain BGM07_003570 PF01584 CheW-like domain BGM07_003585 PF00892 EamA-like transporter family BGM07_003595 PF01569 PAP2 superfamily BGM07_003605 PF07504 Fungalysin/Thermolysin Propeptide Motif BGM07_003605 PF02868 Thermolysin metallopeptidase, alpha-helical domain BGM07_003605 PF04151 Bacterial pre-peptidase C-terminal domain BGM07_003605 PF01447 Thermolysin metallopeptidase, catalytic domain BGM07_003605 PF03413 Peptidase propeptide and YPEB domain BGM07_003610 PF00893 Small Multidrug Resistance protein BGM07_003615 PF00892 EamA-like transporter family BGM07_003635 PF00171 Aldehyde dehydrogenase family BGM07_003640 PF00939 Sodium:sulfate symporter transmembrane region BGM07_003645 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BGM07_003645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_003645 PF00989 PAS fold BGM07_003645 PF17203 Single cache domain 3 BGM07_003650 PF12431 Transcriptional regulator BGM07_003650 PF00072 Response regulator receiver domain BGM07_003660 PF13187 4Fe-4S dicluster domain BGM07_003660 PF01645 Conserved region in glutamate synthase BGM07_003670 PF00141 Peroxidase BGM07_003685 PF01757 Acyltransferase family BGM07_003695 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BGM07_003700 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BGM07_003720 PF00571 CBS domain BGM07_003720 PF03448 MgtE intracellular N domain BGM07_003720 PF01769 Divalent cation transporter BGM07_003740 PF01327 Polypeptide deformylase BGM07_003745 PF00376 MerR family regulatory protein BGM07_003745 PF09278 MerR, DNA binding BGM07_003760 PF02253 Phospholipase A1 BGM07_003780 PF00664 ABC transporter transmembrane region BGM07_003780 PF00005 ABC transporter BGM07_003785 PF11490 DNA polymerase III polC-type N-terminus II BGM07_003785 PF07733 Bacterial DNA polymerase III alpha NTPase domain BGM07_003785 PF14579 Helix-hairpin-helix motif BGM07_003785 PF02811 PHP domain BGM07_003785 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BGM07_003785 PF00929 Exonuclease BGM07_003790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_003790 PF03466 LysR substrate binding domain BGM07_003795 PF17848 Acetyl-coA carboxylase zinc finger domain BGM07_003795 PF01039 Carboxyl transferase domain BGM07_003865 PF06508 Queuosine biosynthesis protein QueC BGM07_003875 PF02347 Glycine cleavage system P-protein BGM07_003880 PF01597 Glycine cleavage H-protein BGM07_003885 PF00464 Serine hydroxymethyltransferase BGM07_003895 PF01571 Aminomethyltransferase folate-binding domain BGM07_003895 PF08669 Glycine cleavage T-protein C-terminal barrel domain BGM07_003915 PF00873 AcrB/AcrD/AcrF family BGM07_003925 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BGM07_003925 PF02378 Phosphotransferase system, EIIC BGM07_003930 PF00294 pfkB family carbohydrate kinase BGM07_003935 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BGM07_003935 PF00381 PTS HPr component phosphorylation site BGM07_003940 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BGM07_003940 PF00356 Bacterial regulatory proteins, lacI family BGM07_003960 PF00989 PAS fold BGM07_003960 PF00563 EAL domain BGM07_003960 PF00990 Diguanylate cyclase, GGDEF domain BGM07_003960 PF01590 GAF domain BGM07_003965 PF00528 Binding-protein-dependent transport system inner membrane component BGM07_003970 PF00497 Bacterial extracellular solute-binding proteins, family 3 BGM07_003975 PF00528 Binding-protein-dependent transport system inner membrane component BGM07_003980 PF00005 ABC transporter BGM07_003985 PF02887 Pyruvate kinase, alpha/beta domain BGM07_003985 PF00224 Pyruvate kinase, barrel domain BGM07_003990 PF07690 Major Facilitator Superfamily BGM07_004000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_004000 PF00672 HAMP domain BGM07_004000 PF00512 His Kinase A (phospho-acceptor) domain BGM07_004005 PF02954 Bacterial regulatory protein, Fis family BGM07_004005 PF00072 Response regulator receiver domain BGM07_004005 PF14532 Sigma-54 interaction domain BGM07_004015 PF00465 Iron-containing alcohol dehydrogenase BGM07_004020 PF12833 Helix-turn-helix domain BGM07_004020 PF06719 AraC-type transcriptional regulator N-terminus BGM07_004030 PF00704 Glycosyl hydrolases family 18 BGM07_004030 PF06483 Chitinase C BGM07_004035 PF00483 Nucleotidyl transferase BGM07_004040 PF01268 Formate--tetrahydrofolate ligase BGM07_004045 PF00294 pfkB family carbohydrate kinase BGM07_004060 PF11849 Domain of unknown function (DUF3369) BGM07_004065 PF13419 Haloacid dehalogenase-like hydrolase BGM07_004075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGM07_004085 PF04336 Acyl carrier protein phosphodiesterase BGM07_004090 PF00271 Helicase conserved C-terminal domain BGM07_004090 PF00270 DEAD/DEAH box helicase BGM07_004095 PF12792 CSS motif domain associated with EAL BGM07_004095 PF00563 EAL domain BGM07_004110 PF01292 Prokaryotic cytochrome b561 BGM07_004115 PF04264 YceI-like domain BGM07_004120 PF01226 Formate/nitrite transporter BGM07_004125 PF03466 LysR substrate binding domain BGM07_004125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_004130 PF06496 Protein of unknown function (DUF1097) BGM07_004135 PF11398 Protein of unknown function (DUF2813) BGM07_004140 PF00149 Calcineurin-like phosphoesterase BGM07_004140 PF02872 5'-nucleotidase, C-terminal domain BGM07_004145 PF03741 Integral membrane protein TerC family BGM07_004160 PF12262 Bacterial virulence factor lipase N-terminal BGM07_004165 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BGM07_004180 PF03061 Thioesterase superfamily BGM07_004190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BGM07_004190 PF12793 Sugar transport-related sRNA regulator N-term BGM07_004215 PF00226 DnaJ domain BGM07_004215 PF01556 DnaJ C terminal domain BGM07_004215 PF00684 DnaJ central domain BGM07_004225 PF00563 EAL domain BGM07_004225 PF00990 Diguanylate cyclase, GGDEF domain BGM07_004225 PF13188 PAS domain BGM07_004225 PF03707 Bacterial signalling protein N terminal repeat BGM07_004230 PF12241 Trans-2-enoyl-CoA reductase catalytic region BGM07_004230 PF07055 Enoyl reductase FAD binding domain BGM07_004230 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase BGM07_004235 PF13472 GDSL-like Lipase/Acylhydrolase family BGM07_004240 PF00005 ABC transporter BGM07_004255 PF02626 Carboxyltransferase domain, subdomain A and B BGM07_004260 PF02682 Carboxyltransferase domain, subdomain C and D BGM07_004265 PF03746 LamB/YcsF family BGM07_004270 PF08447 PAS fold BGM07_004270 PF05231 MASE1 BGM07_004270 PF08448 PAS fold BGM07_004270 PF13426 PAS domain BGM07_004270 PF00990 Diguanylate cyclase, GGDEF domain BGM07_004270 PF00563 EAL domain BGM07_004275 PF16363 GDP-mannose 4,6 dehydratase BGM07_004285 PF07715 TonB-dependent Receptor Plug Domain BGM07_004285 PF04886 PT repeat BGM07_004285 PF00593 TonB dependent receptor BGM07_004290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_004290 PF03466 LysR substrate binding domain BGM07_004295 PF13380 CoA binding domain BGM07_004295 PF00583 Acetyltransferase (GNAT) family BGM07_004295 PF13607 Succinyl-CoA ligase like flavodoxin domain BGM07_004305 PF01820 D-ala D-ala ligase N-terminus BGM07_004305 PF07478 D-ala D-ala ligase C-terminus BGM07_004315 PF01253 Translation initiation factor SUI1 BGM07_004470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_004470 PF03466 LysR substrate binding domain BGM07_004480 PF00582 Universal stress protein family BGM07_004485 PF03701 Uncharacterised protein family (UPF0181) BGM07_004500 PF00486 Transcriptional regulatory protein, C terminal BGM07_004500 PF00072 Response regulator receiver domain BGM07_004510 PF02233 NAD(P) transhydrogenase beta subunit BGM07_004515 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BGM07_004515 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BGM07_004515 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BGM07_004530 PF00072 Response regulator receiver domain BGM07_004530 PF00990 Diguanylate cyclase, GGDEF domain BGM07_004540 PF00563 EAL domain BGM07_004540 PF01590 GAF domain BGM07_004540 PF00990 Diguanylate cyclase, GGDEF domain BGM07_004540 PF00360 Phytochrome region BGM07_004550 PF03459 TOBE domain BGM07_004550 PF00005 ABC transporter BGM07_004555 PF00528 Binding-protein-dependent transport system inner membrane component BGM07_004565 PF07685 CobB/CobQ-like glutamine amidotransferase domain BGM07_004570 PF04076 Bacterial OB fold (BOF) protein BGM07_004580 PF08443 RimK-like ATP-grasp domain BGM07_004580 PF18030 RimK PreATP-grasp domain BGM07_004585 PF00155 Aminotransferase class I and II BGM07_004590 PF12833 Helix-turn-helix domain BGM07_004595 PF01554 MatE BGM07_004605 PF13597 Anaerobic ribonucleoside-triphosphate reductase BGM07_004605 PF03477 ATP cone domain BGM07_004615 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BGM07_004620 PF00873 AcrB/AcrD/AcrF family BGM07_004630 PF04143 Sulphur transport BGM07_004645 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BGM07_004645 PF07992 Pyridine nucleotide-disulphide oxidoreductase BGM07_004650 PF00384 Molybdopterin oxidoreductase BGM07_004660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_004660 PF03466 LysR substrate binding domain BGM07_004665 PF02634 FdhD/NarQ family BGM07_004670 PF07690 Major Facilitator Superfamily BGM07_004675 PF00072 Response regulator receiver domain BGM07_004675 PF00196 Bacterial regulatory proteins, luxR family BGM07_004680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_004680 PF07730 Histidine kinase BGM07_004680 PF05231 MASE1 BGM07_004685 PF07690 Major Facilitator Superfamily BGM07_004690 PF01238 Phosphomannose isomerase type I BGM07_004710 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BGM07_004710 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BGM07_004715 PF00085 Thioredoxin BGM07_004720 PF07690 Major Facilitator Superfamily BGM07_004730 PF01554 MatE BGM07_004735 PF11756 Nitrous oxide-stimulated promoter BGM07_004750 PF07715 TonB-dependent Receptor Plug Domain BGM07_004750 PF00593 TonB dependent receptor BGM07_004765 PF03605 Anaerobic c4-dicarboxylate membrane transporter BGM07_004780 PF14824 Sirohaem biosynthesis protein central BGM07_004780 PF10414 Sirohaem synthase dimerisation region BGM07_004780 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BGM07_004785 PF01226 Formate/nitrite transporter BGM07_004790 PF13806 Rieske-like [2Fe-2S] domain BGM07_004795 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BGM07_004795 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BGM07_004795 PF07992 Pyridine nucleotide-disulphide oxidoreductase BGM07_004795 PF04324 BFD-like [2Fe-2S] binding domain BGM07_004795 PF18267 Rubredoxin NAD+ reductase C-terminal domain BGM07_004800 PF01272 Transcription elongation factor, GreA/GreB, C-term BGM07_004800 PF14760 Rnk N-terminus BGM07_004840 PF06965 Na+/H+ antiporter 1 BGM07_004840 PF13462 Thioredoxin BGM07_004860 PF09154 Domain of unknown function (DUF1939) BGM07_004860 PF00128 Alpha amylase, catalytic domain BGM07_004875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGM07_004875 PF00672 HAMP domain BGM07_004880 PF00842 Alanine racemase, C-terminal domain BGM07_004880 PF01168 Alanine racemase, N-terminal domain BGM07_004900 PF09330 D-lactate dehydrogenase, membrane binding BGM07_004900 PF01565 FAD binding domain BGM07_004905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_004905 PF03466 LysR substrate binding domain BGM07_004920 PF05762 VWA domain containing CoxE-like protein BGM07_004925 PF12592 Protein of unknown function (DUF3763) BGM07_004925 PF17868 AAA lid domain BGM07_004925 PF07728 AAA domain (dynein-related subfamily) BGM07_004930 PF00293 NUDIX domain BGM07_004935 PF01212 Beta-eliminating lyase BGM07_004940 PF00034 Cytochrome c BGM07_004945 PF03606 C4-dicarboxylate anaerobic carrier BGM07_004955 PF07690 Major Facilitator Superfamily BGM07_004965 PF08212 Lipocalin-like domain BGM07_004985 PF13476 AAA domain BGM07_004990 PF00149 Calcineurin-like phosphoesterase BGM07_004990 PF12320 Type 5 capsule protein repressor C-terminal domain BGM07_005005 PF16671 Actin cross-linking domain BGM07_005005 PF04717 Type VI secretion system, phage-baseplate injector BGM07_005015 PF10431 C-terminal, D2-small domain, of ClpB protein BGM07_005015 PF00004 ATPase family associated with various cellular activities (AAA) BGM07_005015 PF07724 AAA domain (Cdc48 subfamily) BGM07_005015 PF17871 AAA lid domain BGM07_005075 PF13677 Membrane MotB of proton-channel complex MotA/MotB BGM07_005075 PF00691 OmpA family BGM07_005100 PF03793 PASTA domain BGM07_005100 PF00069 Protein kinase domain BGM07_005120 PF00211 Adenylate and Guanylate cyclase catalytic domain BGM07_005120 PF00072 Response regulator receiver domain BGM07_005135 PF00440 Bacterial regulatory proteins, tetR family BGM07_005135 PF08361 MAATS-type transcriptional repressor, C-terminal region BGM07_005150 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BGM07_005150 PF18267 Rubredoxin NAD+ reductase C-terminal domain BGM07_005150 PF13806 Rieske-like [2Fe-2S] domain BGM07_005150 PF07992 Pyridine nucleotide-disulphide oxidoreductase BGM07_005150 PF04324 BFD-like [2Fe-2S] binding domain BGM07_005150 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BGM07_005155 PF00005 ABC transporter BGM07_005160 PF00528 Binding-protein-dependent transport system inner membrane component BGM07_005165 PF00005 ABC transporter BGM07_005175 PF08376 Nitrate and nitrite sensing BGM07_005175 PF03861 ANTAR domain BGM07_005180 PF01738 Dienelactone hydrolase family BGM07_005185 PF02885 Glycosyl transferase family, helical bundle domain BGM07_005185 PF00591 Glycosyl transferase family, a/b domain BGM07_005190 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BGM07_005190 PF10414 Sirohaem synthase dimerisation region BGM07_005190 PF14824 Sirohaem biosynthesis protein central BGM07_005195 PF00384 Molybdopterin oxidoreductase BGM07_005195 PF01568 Molydopterin dinucleotide binding domain BGM07_005195 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BGM07_005200 PF00583 Acetyltransferase (GNAT) family BGM07_005205 PF03222 Tryptophan/tyrosine permease family BGM07_005215 PF00990 Diguanylate cyclase, GGDEF domain BGM07_005215 PF00072 Response regulator receiver domain BGM07_005225 PF00082 Subtilase family BGM07_005225 PF01483 Proprotein convertase P-domain BGM07_005235 PF00245 Alkaline phosphatase BGM07_005250 PF00486 Transcriptional regulatory protein, C terminal BGM07_005250 PF00072 Response regulator receiver domain BGM07_005275 PF04314 Copper chaperone PCu(A)C BGM07_005280 PF00012 Hsp70 protein BGM07_005295 PF00676 Dehydrogenase E1 component BGM07_005300 PF02779 Transketolase, pyrimidine binding domain BGM07_005300 PF02780 Transketolase, C-terminal domain BGM07_005305 PF02817 e3 binding domain BGM07_005305 PF00364 Biotin-requiring enzyme BGM07_005305 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BGM07_005315 PF00043 Glutathione S-transferase, C-terminal domain BGM07_005315 PF02798 Glutathione S-transferase, N-terminal domain BGM07_005320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_005320 PF03466 LysR substrate binding domain BGM07_005330 PF00528 Binding-protein-dependent transport system inner membrane component BGM07_005335 PF00528 Binding-protein-dependent transport system inner membrane component BGM07_005340 PF00497 Bacterial extracellular solute-binding proteins, family 3 BGM07_005345 PF00005 ABC transporter BGM07_005350 PF08031 Berberine and berberine like BGM07_005350 PF01565 FAD binding domain BGM07_005355 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BGM07_005365 PF01040 UbiA prenyltransferase family BGM07_005375 PF00510 Cytochrome c oxidase subunit III BGM07_005380 PF00115 Cytochrome C and Quinol oxidase polypeptide I BGM07_005385 PF06481 COX Aromatic Rich Motif BGM07_005385 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BGM07_005395 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BGM07_005395 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BGM07_005400 PF00378 Enoyl-CoA hydratase/isomerase BGM07_005405 PF00378 Enoyl-CoA hydratase/isomerase BGM07_005415 PF00171 Aldehyde dehydrogenase family BGM07_005420 PF00108 Thiolase, N-terminal domain BGM07_005420 PF02803 Thiolase, C-terminal domain BGM07_005425 PF09278 MerR, DNA binding BGM07_005425 PF00376 MerR family regulatory protein BGM07_005430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BGM07_005430 PF02770 Acyl-CoA dehydrogenase, middle domain BGM07_005430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BGM07_005435 PF01039 Carboxyl transferase domain BGM07_005440 PF00378 Enoyl-CoA hydratase/isomerase BGM07_005445 PF00682 HMGL-like BGM07_005450 PF10063 Uncharacterized integral membrane protein (DUF2301) BGM07_005460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGM07_005460 PF08447 PAS fold BGM07_005460 PF13426 PAS domain BGM07_005465 PF00871 Acetokinase family BGM07_005475 PF00990 Diguanylate cyclase, GGDEF domain BGM07_005475 PF13426 PAS domain BGM07_005475 PF00563 EAL domain BGM07_005480 PF03880 DbpA RNA binding domain BGM07_005480 PF00270 DEAD/DEAH box helicase BGM07_005480 PF00271 Helicase conserved C-terminal domain BGM07_005485 PF00575 S1 RNA binding domain BGM07_005485 PF00773 RNB domain BGM07_005485 PF08206 Ribonuclease B OB domain BGM07_005490 PF12833 Helix-turn-helix domain BGM07_005500 PF12849 PBP superfamily domain BGM07_005515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_005515 PF03466 LysR substrate binding domain BGM07_005520 PF13186 Iron-sulfur cluster-binding domain BGM07_005520 PF04055 Radical SAM superfamily BGM07_005525 PF00884 Sulfatase BGM07_005530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_005530 PF03466 LysR substrate binding domain BGM07_005540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGM07_005540 PF12729 Four helix bundle sensory module for signal transduction BGM07_005540 PF00672 HAMP domain BGM07_005545 PF00005 ABC transporter BGM07_005550 PF12792 CSS motif domain associated with EAL BGM07_005550 PF00563 EAL domain BGM07_005570 PF00271 Helicase conserved C-terminal domain BGM07_005570 PF00270 DEAD/DEAH box helicase BGM07_005575 PF07683 Cobalamin synthesis protein cobW C-terminal domain BGM07_005575 PF02492 CobW/HypB/UreG, nucleotide-binding domain BGM07_005585 PF01470 Pyroglutamyl peptidase BGM07_005595 PF00291 Pyridoxal-phosphate dependent enzyme BGM07_005600 PF09905 DNA-binding protein VF530 BGM07_005605 PF00271 Helicase conserved C-terminal domain BGM07_005605 PF00270 DEAD/DEAH box helicase BGM07_005610 PF12843 Putative quorum-sensing-regulated virulence factor BGM07_005630 PF01329 Pterin 4 alpha carbinolamine dehydratase BGM07_005635 PF00351 Biopterin-dependent aromatic amino acid hydroxylase BGM07_005640 PF00501 AMP-binding enzyme BGM07_005640 PF13193 AMP-binding enzyme C-terminal domain BGM07_005650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_005650 PF03466 LysR substrate binding domain BGM07_005670 PF00892 EamA-like transporter family BGM07_005685 PF00465 Iron-containing alcohol dehydrogenase BGM07_005690 PF07995 Glucose / Sorbosone dehydrogenase BGM07_005700 PF00210 Ferritin-like domain BGM07_005705 PF00672 HAMP domain BGM07_005705 PF17200 Single Cache domain 2 BGM07_005705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGM07_005715 PF02687 FtsX-like permease family BGM07_005715 PF12704 MacB-like periplasmic core domain BGM07_005715 PF00005 ABC transporter BGM07_005720 PF00005 ABC transporter BGM07_005720 PF12704 MacB-like periplasmic core domain BGM07_005720 PF02687 FtsX-like permease family BGM07_005735 PF00990 Diguanylate cyclase, GGDEF domain BGM07_005745 PF13426 PAS domain BGM07_005745 PF08447 PAS fold BGM07_005745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGM07_005750 PF03889 Alternative ribosome-rescue factor A BGM07_005755 PF00313 'Cold-shock' DNA-binding domain BGM07_005785 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BGM07_005785 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BGM07_005790 PF01040 UbiA prenyltransferase family BGM07_005795 PF02628 Cytochrome oxidase assembly protein BGM07_005815 PF00510 Cytochrome c oxidase subunit III BGM07_005820 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 BGM07_005825 PF00115 Cytochrome C and Quinol oxidase polypeptide I BGM07_005830 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BGM07_005830 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BGM07_005835 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BGM07_005835 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BGM07_005835 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BGM07_005835 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BGM07_005845 PF01810 LysE type translocator BGM07_005850 PF12833 Helix-turn-helix domain BGM07_005865 PF01557 Fumarylacetoacetate (FAA) hydrolase family BGM07_005880 PF00892 EamA-like transporter family BGM07_005885 PF00462 Glutaredoxin BGM07_005905 PF07690 Major Facilitator Superfamily BGM07_005910 PF03466 LysR substrate binding domain BGM07_005910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_005915 PF00563 EAL domain BGM07_005915 PF00990 Diguanylate cyclase, GGDEF domain BGM07_005915 PF08447 PAS fold BGM07_005915 PF08448 PAS fold BGM07_005920 PF01551 Peptidase family M23 BGM07_005920 PF08525 Opacity-associated protein A N-terminal motif BGM07_005920 PF01476 LysM domain BGM07_005945 PF00672 HAMP domain BGM07_005945 PF02743 Cache domain BGM07_005945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGM07_005955 PF03222 Tryptophan/tyrosine permease family BGM07_005990 PF00107 Zinc-binding dehydrogenase BGM07_005990 PF08240 Alcohol dehydrogenase GroES-like domain BGM07_005995 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BGM07_005995 PF02378 Phosphotransferase system, EIIC BGM07_006000 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BGM07_006020 PF01758 Sodium Bile acid symporter family BGM07_006030 PF01161 Phosphatidylethanolamine-binding protein BGM07_006035 PF02567 Phenazine biosynthesis-like protein BGM07_006040 PF10282 Lactonase, 7-bladed beta-propeller BGM07_006050 PF00672 HAMP domain BGM07_006050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGM07_006060 PF00005 ABC transporter BGM07_006080 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BGM07_006080 PF00384 Molybdopterin oxidoreductase BGM07_006080 PF01568 Molydopterin dinucleotide binding domain BGM07_006080 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BGM07_006080 PF12838 4Fe-4S dicluster domain BGM07_006105 PF00873 AcrB/AcrD/AcrF family BGM07_006125 PF00990 Diguanylate cyclase, GGDEF domain BGM07_006125 PF13185 GAF domain BGM07_006135 PF13302 Acetyltransferase (GNAT) domain BGM07_006145 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BGM07_006150 PF00873 AcrB/AcrD/AcrF family BGM07_006155 PF13533 Biotin-lipoyl like BGM07_006165 PF00326 Prolyl oligopeptidase family BGM07_006165 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BGM07_006175 PF00582 Universal stress protein family BGM07_006180 PF02525 Flavodoxin-like fold BGM07_006185 PF02254 TrkA-N domain BGM07_006185 PF00999 Sodium/hydrogen exchanger family BGM07_006200 PF00128 Alpha amylase, catalytic domain BGM07_006210 PF04151 Bacterial pre-peptidase C-terminal domain BGM07_006210 PF01752 Collagenase BGM07_006210 PF08453 Peptidase family M9 N-terminal BGM07_006225 PF03466 LysR substrate binding domain BGM07_006225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_006235 PF00210 Ferritin-like domain BGM07_006240 PF00141 Peroxidase BGM07_006260 PF00082 Subtilase family BGM07_006280 PF07690 Major Facilitator Superfamily BGM07_006285 PF03466 LysR substrate binding domain BGM07_006285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_006305 PF00072 Response regulator receiver domain BGM07_006305 PF01584 CheW-like domain BGM07_006315 PF01243 Pyridoxamine 5'-phosphate oxidase BGM07_006320 PF06228 Haem utilisation ChuX/HutX BGM07_006325 PF04055 Radical SAM superfamily BGM07_006330 PF03544 Gram-negative bacterial TonB protein C-terminal BGM07_006335 PF01618 MotA/TolQ/ExbB proton channel family BGM07_006340 PF02472 Biopolymer transport protein ExbD/TolR BGM07_006350 PF01032 FecCD transport family BGM07_006355 PF00005 ABC transporter BGM07_006400 PF01467 Cytidylyltransferase-like BGM07_006405 PF02540 NAD synthase BGM07_006410 PF00111 2Fe-2S iron-sulfur cluster binding domain BGM07_006410 PF03476 MOSC N-terminal beta barrel domain BGM07_006410 PF03473 MOSC domain BGM07_006410 PF00111 2Fe-2S iron-sulfur cluster binding domain BGM07_006410 PF03476 MOSC N-terminal beta barrel domain BGM07_006410 PF03473 MOSC domain BGM07_006420 PF01679 Proteolipid membrane potential modulator BGM07_006430 PF01979 Amidohydrolase family BGM07_006435 PF05661 Protein of unknown function (DUF808) BGM07_006465 PF00108 Thiolase, N-terminal domain BGM07_006465 PF02803 Thiolase, C-terminal domain BGM07_006485 PF13737 Transposase DDE domain BGM07_006520 PF03347 Vibrio thermostable direct hemolysin BGM07_006525 PF13737 Transposase DDE domain BGM07_006535 PF02492 CobW/HypB/UreG, nucleotide-binding domain BGM07_006540 PF01730 UreF BGM07_006545 PF05194 UreE urease accessory protein, C-terminal domain BGM07_006545 PF02814 UreE urease accessory protein, N-terminal domain BGM07_006550 PF01979 Amidohydrolase family BGM07_006550 PF00449 Urease alpha-subunit, N-terminal domain BGM07_006555 PF00699 Urease beta subunit BGM07_006560 PF00547 Urease, gamma subunit BGM07_006565 PF01774 UreD urease accessory protein BGM07_006570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BGM07_006575 PF00528 Binding-protein-dependent transport system inner membrane component BGM07_006580 PF12911 N-terminal TM domain of oligopeptide transport permease C BGM07_006580 PF00528 Binding-protein-dependent transport system inner membrane component BGM07_006585 PF00005 ABC transporter BGM07_006585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BGM07_006590 PF00005 ABC transporter BGM07_006595 PF12833 Helix-turn-helix domain BGM07_006600 PF03347 Vibrio thermostable direct hemolysin BGM07_006605 PF13737 Transposase DDE domain BGM07_006615 PF00816 H-NS histone family BGM07_006620 PF17291 N-terminal domain of M60-like peptidases BGM07_006620 PF13322 Domain of unknown function (DUF4092) BGM07_006620 PF13402 Peptidase M60, enhancin and enhancin-like BGM07_006630 PF00892 EamA-like transporter family BGM07_006685 PF02874 ATP synthase alpha/beta family, beta-barrel domain BGM07_006685 PF18269 T3SS EscN ATPase C-terminal domain BGM07_006685 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BGM07_006705 PF00813 FliP family BGM07_006720 PF00486 Transcriptional regulatory protein, C terminal BGM07_006750 PF01312 FlhB HrpN YscU SpaS Family BGM07_006755 PF00771 FHIPEP family BGM07_006865 PF00990 Diguanylate cyclase, GGDEF domain BGM07_006865 PF00563 EAL domain BGM07_006865 PF13426 PAS domain BGM07_006885 PF13737 Transposase DDE domain BGM07_007000 PF00528 Binding-protein-dependent transport system inner membrane component BGM07_007005 PF14785 Maltose transport system permease protein MalF P2 domain BGM07_007005 PF00528 Binding-protein-dependent transport system inner membrane component BGM07_007010 PF01547 Bacterial extracellular solute-binding protein BGM07_007015 PF08402 TOBE domain BGM07_007015 PF00005 ABC transporter BGM07_007020 PF02397 Bacterial sugar transferase BGM07_007035 PF02706 Chain length determinant protein BGM07_007035 PF13614 AAA domain BGM07_007035 PF13807 G-rich domain on putative tyrosine kinase BGM07_007045 PF00534 Glycosyl transferases group 1 BGM07_007045 PF13439 Glycosyltransferase Family 4 BGM07_007080 PF00440 Bacterial regulatory proteins, tetR family BGM07_007080 PF16925 Tetracyclin repressor-like, C-terminal domain BGM07_007085 PF00107 Zinc-binding dehydrogenase BGM07_007085 PF16884 N-terminal domain of oxidoreductase BGM07_007090 PF13417 Glutathione S-transferase, N-terminal domain BGM07_007095 PF06628 Catalase-related immune-responsive BGM07_007095 PF00199 Catalase BGM07_007100 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BGM07_007100 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BGM07_007110 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BGM07_007120 PF12833 Helix-turn-helix domain BGM07_007125 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BGM07_007125 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BGM07_007130 PF01238 Phosphomannose isomerase type I BGM07_007140 PF13419 Haloacid dehalogenase-like hydrolase BGM07_007145 PF00127 Copper binding proteins, plastocyanin/azurin family BGM07_007150 PF00990 Diguanylate cyclase, GGDEF domain BGM07_007150 PF00563 EAL domain BGM07_007150 PF03707 Bacterial signalling protein N terminal repeat BGM07_007155 PF02386 Cation transport protein BGM07_007160 PF02080 TrkA-C domain BGM07_007160 PF02254 TrkA-N domain BGM07_007165 PF00072 Response regulator receiver domain BGM07_007165 PF00486 Transcriptional regulatory protein, C terminal BGM07_007170 PF00512 His Kinase A (phospho-acceptor) domain BGM07_007170 PF00989 PAS fold BGM07_007170 PF16736 Single Cache-like BGM07_007170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_007175 PF00005 ABC transporter BGM07_007175 PF00664 ABC transporter transmembrane region BGM07_007180 PF00593 TonB dependent receptor BGM07_007180 PF07715 TonB-dependent Receptor Plug Domain BGM07_007185 PF00005 ABC transporter BGM07_007190 PF01497 Periplasmic binding protein BGM07_007195 PF01032 FecCD transport family BGM07_007205 PF00691 OmpA family BGM07_007220 PF00529 HlyD membrane-fusion protein of T1SS BGM07_007225 PF00005 ABC transporter BGM07_007225 PF00664 ABC transporter transmembrane region BGM07_007235 PF00196 Bacterial regulatory proteins, luxR family BGM07_007240 PF00196 Bacterial regulatory proteins, luxR family BGM07_007250 PF00672 HAMP domain BGM07_007250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGM07_007250 PF02743 Cache domain BGM07_007255 PF17863 AAA lid domain BGM07_007255 PF07726 ATPase family associated with various cellular activities (AAA) BGM07_007260 PF01882 Protein of unknown function DUF58 BGM07_007270 PF13519 von Willebrand factor type A domain BGM07_007275 PF13519 von Willebrand factor type A domain BGM07_007275 PF07584 Aerotolerance regulator N-terminal BGM07_007290 PF00005 ABC transporter BGM07_007295 PF00528 Binding-protein-dependent transport system inner membrane component BGM07_007300 PF00528 Binding-protein-dependent transport system inner membrane component BGM07_007305 PF12849 PBP superfamily domain BGM07_007310 PF00672 HAMP domain BGM07_007310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGM07_007330 PF07715 TonB-dependent Receptor Plug Domain BGM07_007330 PF00593 TonB dependent receptor BGM07_007335 PF00326 Prolyl oligopeptidase family BGM07_007335 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BGM07_007340 PF00270 DEAD/DEAH box helicase BGM07_007340 PF00271 Helicase conserved C-terminal domain BGM07_007350 PF17969 L,D-transpeptidase C-terminal domain BGM07_007350 PF01476 LysM domain BGM07_007350 PF03734 L,D-transpeptidase catalytic domain BGM07_007355 PF00875 DNA photolyase BGM07_007355 PF03441 FAD binding domain of DNA photolyase BGM07_007360 PF13411 MerR HTH family regulatory protein BGM07_007365 PF08349 Protein of unknown function (DUF1722) BGM07_007370 PF01048 Phosphorylase superfamily BGM07_007385 PF00990 Diguanylate cyclase, GGDEF domain BGM07_007390 PF11742 Protein of unknown function (DUF3302) BGM07_007395 PF00529 HlyD membrane-fusion protein of T1SS BGM07_007395 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BGM07_007400 PF07155 ECF-type riboflavin transporter, S component BGM07_007405 PF00005 ABC transporter BGM07_007405 PF12558 ATP-binding cassette cobalt transporter BGM07_007420 PF12801 4Fe-4S binding domain BGM07_007420 PF13237 4Fe-4S dicluster domain BGM07_007425 PF12800 4Fe-4S binding domain BGM07_007425 PF12838 4Fe-4S dicluster domain BGM07_007430 PF00583 Acetyltransferase (GNAT) family BGM07_007445 PF07238 PilZ domain BGM07_007445 PF12945 Flagellar protein YcgR BGM07_007450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGM07_007450 PF00672 HAMP domain BGM07_007455 PF13654 AAA domain BGM07_007455 PF05362 Lon protease (S16) C-terminal proteolytic domain BGM07_007465 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BGM07_007465 PF00005 ABC transporter BGM07_007475 PF03466 LysR substrate binding domain BGM07_007475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_007480 PF02652 L-lactate permease BGM07_007485 PF01070 FMN-dependent dehydrogenase BGM07_007495 PF00924 Mechanosensitive ion channel BGM07_007500 PF00194 Eukaryotic-type carbonic anhydrase BGM07_007530 PF00107 Zinc-binding dehydrogenase BGM07_007530 PF08240 Alcohol dehydrogenase GroES-like domain BGM07_007535 PF00155 Aminotransferase class I and II BGM07_007540 PF03707 Bacterial signalling protein N terminal repeat BGM07_007540 PF00990 Diguanylate cyclase, GGDEF domain BGM07_007540 PF00563 EAL domain BGM07_007545 PF00497 Bacterial extracellular solute-binding proteins, family 3 BGM07_007550 PF00266 Aminotransferase class-V BGM07_007555 PF00080 Copper/zinc superoxide dismutase (SODC) BGM07_007560 PF08448 PAS fold BGM07_007560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_007560 PF13426 PAS domain BGM07_007560 PF00512 His Kinase A (phospho-acceptor) domain BGM07_007560 PF00072 Response regulator receiver domain BGM07_007565 PF00072 Response regulator receiver domain BGM07_007565 PF00486 Transcriptional regulatory protein, C terminal BGM07_007590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_007590 PF03466 LysR substrate binding domain BGM07_007595 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BGM07_007630 PF03466 LysR substrate binding domain BGM07_007630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_007645 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BGM07_007645 PF18269 T3SS EscN ATPase C-terminal domain BGM07_007655 PF01706 FliG C-terminal domain BGM07_007655 PF14841 FliG middle domain BGM07_007655 PF14842 FliG N-terminal domain BGM07_007660 PF08345 Flagellar M-ring protein C-terminal BGM07_007660 PF01514 Secretory protein of YscJ/FliF family BGM07_007665 PF02049 Flagellar hook-basal body complex protein FliE BGM07_007670 PF00158 Sigma-54 interaction domain BGM07_007670 PF02954 Bacterial regulatory protein, Fis family BGM07_007670 PF00072 Response regulator receiver domain BGM07_007685 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BGM07_007690 PF00813 FliP family BGM07_007695 PF01313 Bacterial export proteins, family 3 BGM07_007700 PF01311 Bacterial export proteins, family 1 BGM07_007705 PF01312 FlhB HrpN YscU SpaS Family BGM07_007710 PF00771 FHIPEP family BGM07_007720 PF00669 Bacterial flagellin N-terminal helical region BGM07_007720 PF00700 Bacterial flagellin C-terminal helical region BGM07_007740 PF07196 Flagellin hook IN motif BGM07_007740 PF07195 Flagellar hook-associated protein 2 C-terminus BGM07_007740 PF02465 Flagellar hook-associated protein 2 N-terminus BGM07_007745 PF02561 Flagellar protein FliS BGM07_007760 PF03748 Flagellar basal body-associated protein FliL BGM07_007765 PF04545 Sigma-70, region 4 BGM07_007765 PF04542 Sigma-70 region 2 BGM07_007770 PF01618 MotA/TolQ/ExbB proton channel family BGM07_007775 PF00691 OmpA family BGM07_007775 PF13677 Membrane MotB of proton-channel complex MotA/MotB BGM07_007785 PF08000 Bacterial PH domain BGM07_007825 PF04055 Radical SAM superfamily BGM07_007830 PF00923 Transaldolase/Fructose-6-phosphate aldolase BGM07_007840 PF00583 Acetyltransferase (GNAT) family BGM07_007855 PF07690 Major Facilitator Superfamily BGM07_007860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_007860 PF03466 LysR substrate binding domain BGM07_007865 PF00892 EamA-like transporter family BGM07_007890 PF13533 Biotin-lipoyl like BGM07_007900 PF01594 AI-2E family transporter BGM07_007905 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) BGM07_007915 PF00175 Oxidoreductase NAD-binding domain BGM07_007915 PF00970 Oxidoreductase FAD-binding domain BGM07_007925 PF09905 DNA-binding protein VF530 BGM07_007930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_007930 PF03466 LysR substrate binding domain BGM07_007940 PF00881 Nitroreductase family BGM07_007945 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BGM07_007945 PF12833 Helix-turn-helix domain BGM07_007950 PF00128 Alpha amylase, catalytic domain BGM07_007950 PF00686 Starch binding domain BGM07_007955 PF00768 D-alanyl-D-alanine carboxypeptidase BGM07_007955 PF07943 Penicillin-binding protein 5, C-terminal domain BGM07_007960 PF00561 alpha/beta hydrolase fold BGM07_007975 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading BGM07_007975 PF18416 N-acetylglucosamine binding protein domain 2 BGM07_007980 PF01734 Patatin-like phospholipase BGM07_007985 PF01914 MarC family integral membrane protein BGM07_007990 PF00881 Nitroreductase family BGM07_008000 PF10531 SLBB domain BGM07_008000 PF02563 Polysaccharide biosynthesis/export protein BGM07_008000 PF18412 Outer-membrane lipoprotein Wza C-terminal domain BGM07_008005 PF01451 Low molecular weight phosphotyrosine protein phosphatase BGM07_008010 PF02706 Chain length determinant protein BGM07_008010 PF13614 AAA domain BGM07_008010 PF13807 G-rich domain on putative tyrosine kinase BGM07_008020 PF08803 Putative mono-oxygenase ydhR BGM07_008025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_008025 PF03466 LysR substrate binding domain BGM07_008035 PF00375 Sodium:dicarboxylate symporter family BGM07_008040 PF06803 Protein of unknown function (DUF1232) BGM07_008045 PF01546 Peptidase family M20/M25/M40 BGM07_008045 PF07687 Peptidase dimerisation domain BGM07_008050 PF07670 Nucleoside recognition BGM07_008055 PF07670 Nucleoside recognition BGM07_008070 PF00128 Alpha amylase, catalytic domain BGM07_008075 PF00912 Transglycosylase BGM07_008080 PF00128 Alpha amylase, catalytic domain BGM07_008080 PF02806 Alpha amylase, C-terminal all-beta domain BGM07_008080 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BGM07_008085 PF02446 4-alpha-glucanotransferase BGM07_008090 PF00343 Carbohydrate phosphorylase BGM07_008100 PF00196 Bacterial regulatory proteins, luxR family BGM07_008100 PF17874 MalT-like TPR region BGM07_008115 PF02630 SCO1/SenC BGM07_008125 PF00367 phosphotransferase system, EIIB BGM07_008125 PF02378 Phosphotransferase system, EIIC BGM07_008130 PF03193 RsgA GTPase BGM07_008135 PF00375 Sodium:dicarboxylate symporter family BGM07_008145 PF08543 Phosphomethylpyrimidine kinase BGM07_008155 PF13520 Amino acid permease BGM07_008160 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain BGM07_008160 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BGM07_008160 PF01276 Orn/Lys/Arg decarboxylase, major domain BGM07_008175 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BGM07_008175 PF11852 Domain of unknown function (DUF3372) BGM07_008175 PF03714 Bacterial pullanase-associated domain BGM07_008175 PF18494 Pullulanase Ins domain BGM07_008175 PF17967 Pullulanase N2 domain BGM07_008180 PF04231 Endonuclease I BGM07_008185 PF16657 Maltogenic Amylase, C-terminal domain BGM07_008185 PF02903 Alpha amylase, N-terminal ig-like domain BGM07_008185 PF00128 Alpha amylase, catalytic domain BGM07_008200 PF02264 LamB porin BGM07_008205 PF00128 Alpha amylase, catalytic domain BGM07_008205 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BGM07_008215 PF07690 Major Facilitator Superfamily BGM07_008225 PF01551 Peptidase family M23 BGM07_008225 PF04225 Opacity-associated protein A LysM-like domain BGM07_008235 PF05193 Peptidase M16 inactive domain BGM07_008235 PF00675 Insulinase (Peptidase family M16) BGM07_008240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGM07_008240 PF00672 HAMP domain BGM07_008240 PF17200 Single Cache domain 2 BGM07_008245 PF00005 ABC transporter BGM07_008250 PF01032 FecCD transport family BGM07_008255 PF01032 FecCD transport family BGM07_008260 PF01497 Periplasmic binding protein BGM07_008265 PF00593 TonB dependent receptor BGM07_008265 PF07660 Secretin and TonB N terminus short domain BGM07_008265 PF07715 TonB-dependent Receptor Plug Domain BGM07_008270 PF00593 TonB dependent receptor BGM07_008270 PF07715 TonB-dependent Receptor Plug Domain BGM07_008275 PF02655 ATP-grasp domain BGM07_008275 PF00206 Lyase BGM07_008280 PF06276 Ferric iron reductase FhuF-like transporter BGM07_008280 PF04183 IucA / IucC family BGM07_008290 PF04183 IucA / IucC family BGM07_008290 PF06276 Ferric iron reductase FhuF-like transporter BGM07_008295 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BGM07_008295 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BGM07_008300 PF01547 Bacterial extracellular solute-binding protein BGM07_008305 PF08521 Two-component sensor kinase N-terminal BGM07_008305 PF00512 His Kinase A (phospho-acceptor) domain BGM07_008305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_008310 PF00486 Transcriptional regulatory protein, C terminal BGM07_008310 PF00072 Response regulator receiver domain BGM07_008315 PF02378 Phosphotransferase system, EIIC BGM07_008315 PF00367 phosphotransferase system, EIIB BGM07_008335 PF08241 Methyltransferase domain BGM07_008345 PF00535 Glycosyl transferase family 2 BGM07_008365 PF02566 OsmC-like protein BGM07_008370 PF01047 MarR family BGM07_008375 PF10417 C-terminal domain of 1-Cys peroxiredoxin BGM07_008375 PF00578 AhpC/TSA family BGM07_008380 PF07992 Pyridine nucleotide-disulphide oxidoreductase BGM07_008380 PF13192 Thioredoxin domain BGM07_008395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_008395 PF03466 LysR substrate binding domain BGM07_008400 PF01965 DJ-1/PfpI family BGM07_008400 PF12833 Helix-turn-helix domain BGM07_008405 PF04542 Sigma-70 region 2 BGM07_008405 PF08281 Sigma-70, region 4 BGM07_008420 PF12729 Four helix bundle sensory module for signal transduction BGM07_008420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGM07_008420 PF00672 HAMP domain BGM07_008425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_008425 PF03466 LysR substrate binding domain BGM07_008430 PF11975 Family 4 glycosyl hydrolase C-terminal domain BGM07_008430 PF02056 Family 4 glycosyl hydrolase BGM07_008445 PF03473 MOSC domain BGM07_008445 PF03475 3-alpha domain BGM07_008450 PF00271 Helicase conserved C-terminal domain BGM07_008450 PF00270 DEAD/DEAH box helicase BGM07_008465 PF06719 AraC-type transcriptional regulator N-terminus BGM07_008465 PF12833 Helix-turn-helix domain BGM07_008475 PF00005 ABC transporter BGM07_008475 PF00664 ABC transporter transmembrane region BGM07_008485 PF01037 Lrp/AsnC ligand binding domain BGM07_008520 PF00474 Sodium:solute symporter family BGM07_008530 PF01619 Proline dehydrogenase BGM07_008530 PF14850 DNA-binding domain of Proline dehydrogenase BGM07_008530 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BGM07_008530 PF00171 Aldehyde dehydrogenase family BGM07_008535 PF12833 Helix-turn-helix domain BGM07_008550 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BGM07_008550 PF01243 Pyridoxamine 5'-phosphate oxidase BGM07_008555 PF00512 His Kinase A (phospho-acceptor) domain BGM07_008555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_008555 PF02743 Cache domain BGM07_008560 PF00158 Sigma-54 interaction domain BGM07_008560 PF02954 Bacterial regulatory protein, Fis family BGM07_008560 PF00072 Response regulator receiver domain BGM07_008565 PF00529 HlyD membrane-fusion protein of T1SS BGM07_008580 PF00664 ABC transporter transmembrane region BGM07_008580 PF00005 ABC transporter BGM07_008580 PF03412 Peptidase C39 family BGM07_008670 PF03358 NADPH-dependent FMN reductase BGM07_008675 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BGM07_008680 PF00246 Zinc carboxypeptidase BGM07_008685 PF01380 SIS domain BGM07_008685 PF01418 Helix-turn-helix domain, rpiR family BGM07_008690 PF01380 SIS domain BGM07_008695 PF00367 phosphotransferase system, EIIB BGM07_008695 PF02378 Phosphotransferase system, EIIC BGM07_008700 PF00267 Gram-negative porin BGM07_008705 PF03575 Peptidase family S51 BGM07_008715 PF00132 Bacterial transferase hexapeptide (six repeats) BGM07_008725 PF13718 GNAT acetyltransferase 2 BGM07_008725 PF05127 Helicase BGM07_008730 PF08775 ParB family BGM07_008730 PF02195 ParB-like nuclease domain BGM07_008735 PF13614 AAA domain BGM07_008735 PF18607 ParA helix turn helix domain BGM07_008740 PF00258 Flavodoxin BGM07_008745 PF10396 GTP-binding protein TrmE N-terminus BGM07_008745 PF12631 MnmE helical domain BGM07_008745 PF01926 50S ribosome-binding GTPase BGM07_008750 PF14849 YidC periplasmic domain BGM07_008750 PF02096 60Kd inner membrane protein BGM07_008755 PF01809 Putative membrane protein insertion efficiency factor BGM07_008760 PF00825 Ribonuclease P BGM07_008765 PF00468 Ribosomal protein L34 BGM07_008770 PF00005 ABC transporter BGM07_008775 PF00528 Binding-protein-dependent transport system inner membrane component BGM07_008780 PF00497 Bacterial extracellular solute-binding proteins, family 3 BGM07_008790 PF00308 Bacterial dnaA protein BGM07_008790 PF08299 Bacterial dnaA protein helix-turn-helix BGM07_008790 PF11638 DnaA N-terminal domain BGM07_008795 PF02767 DNA polymerase III beta subunit, central domain BGM07_008795 PF00712 DNA polymerase III beta subunit, N-terminal domain BGM07_008795 PF02768 DNA polymerase III beta subunit, C-terminal domain BGM07_008800 PF02463 RecF/RecN/SMC N terminal domain BGM07_008805 PF00204 DNA gyrase B BGM07_008805 PF01751 Toprim domain BGM07_008805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_008805 PF18053 DNA gyrase B subunit insert domain BGM07_008805 PF00986 DNA gyrase B subunit, carboxyl terminus BGM07_008820 PF00011 Hsp20/alpha crystallin family BGM07_008825 PF00155 Aminotransferase class I and II BGM07_008830 PF00128 Alpha amylase, catalytic domain BGM07_008835 PF05746 DALR anticodon binding domain BGM07_008835 PF02092 Glycyl-tRNA synthetase beta subunit BGM07_008840 PF02091 Glycyl-tRNA synthetase alpha subunit BGM07_008845 PF01169 Uncharacterized protein family UPF0016 BGM07_008855 PF01206 Sulfurtransferase TusA BGM07_008865 PF03466 LysR substrate binding domain BGM07_008865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_008870 PF00107 Zinc-binding dehydrogenase BGM07_008870 PF08240 Alcohol dehydrogenase GroES-like domain BGM07_008875 PF02803 Thiolase, C-terminal domain BGM07_008875 PF00108 Thiolase, N-terminal domain BGM07_008880 PF00378 Enoyl-CoA hydratase/isomerase BGM07_008880 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BGM07_008880 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BGM07_008885 PF01205 Uncharacterized protein family UPF0029 BGM07_008885 PF09186 Domain of unknown function (DUF1949) BGM07_008890 PF02386 Cation transport protein BGM07_008895 PF12724 Flavodoxin domain BGM07_008950 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BGM07_008955 PF01964 Radical SAM ThiC family BGM07_008955 PF13667 ThiC-associated domain BGM07_008960 PF02581 Thiamine monophosphate synthase BGM07_008965 PF00899 ThiF family BGM07_008970 PF02597 ThiS family BGM07_008975 PF05690 Thiazole biosynthesis protein ThiG BGM07_008980 PF04055 Radical SAM superfamily BGM07_008980 PF06968 Biotin and Thiamin Synthesis associated domain BGM07_008985 PF01321 Creatinase/Prolidase N-terminal domain BGM07_008985 PF00557 Metallopeptidase family M24 BGM07_008985 PF01321 Creatinase/Prolidase N-terminal domain BGM07_008985 PF00557 Metallopeptidase family M24 BGM07_008990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_008990 PF03466 LysR substrate binding domain BGM07_008995 PF07690 Major Facilitator Superfamily BGM07_009015 PF05114 Protein of unknown function (DUF692) BGM07_009025 PF13361 UvrD-like helicase C-terminal domain BGM07_009025 PF00580 UvrD/REP helicase N-terminal domain BGM07_009040 PF01810 LysE type translocator BGM07_009050 PF00892 EamA-like transporter family BGM07_009055 PF00570 HRDC domain BGM07_009055 PF09382 RQC domain BGM07_009055 PF16124 RecQ zinc-binding BGM07_009055 PF00271 Helicase conserved C-terminal domain BGM07_009055 PF00270 DEAD/DEAH box helicase BGM07_009065 PF02592 Putative vitamin uptake transporter BGM07_009070 PF02541 Ppx/GppA phosphatase family BGM07_009075 PF00270 DEAD/DEAH box helicase BGM07_009075 PF00271 Helicase conserved C-terminal domain BGM07_009080 PF00085 Thioredoxin BGM07_009085 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BGM07_009085 PF07498 Rho termination factor, N-terminal domain BGM07_009085 PF07497 Rho termination factor, RNA-binding domain BGM07_009095 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase BGM07_009100 PF00111 2Fe-2S iron-sulfur cluster binding domain BGM07_009105 PF00175 Oxidoreductase NAD-binding domain BGM07_009155 PF07219 HemY protein N-terminus BGM07_009160 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase BGM07_009165 PF02602 Uroporphyrinogen-III synthase HemD BGM07_009170 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BGM07_009170 PF03900 Porphobilinogen deaminase, C-terminal domain BGM07_009175 PF12633 Adenylate cyclase NT domain BGM07_009175 PF01295 Adenylate cyclase, class-I BGM07_009180 PF01491 Frataxin-like domain BGM07_009190 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BGM07_009190 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BGM07_009195 PF01678 Diaminopimelate epimerase BGM07_009205 PF02899 Phage integrase, N-terminal SAM-like domain BGM07_009205 PF00589 Phage integrase family BGM07_009210 PF13419 Haloacid dehalogenase-like hydrolase BGM07_009215 PF00990 Diguanylate cyclase, GGDEF domain BGM07_009215 PF10442 FIST C domain BGM07_009215 PF08495 FIST N domain BGM07_009215 PF00563 EAL domain BGM07_009240 PF12146 Serine aminopeptidase, S33 BGM07_009245 PF01810 LysE type translocator BGM07_009250 PF00563 EAL domain BGM07_009250 PF08668 HDOD domain BGM07_009255 PF01022 Bacterial regulatory protein, arsR family BGM07_009260 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BGM07_009260 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BGM07_009315 PF01914 MarC family integral membrane protein BGM07_009330 PF02881 SRP54-type protein, helical bundle domain BGM07_009330 PF00448 SRP54-type protein, GTPase domain BGM07_009335 PF00005 ABC transporter BGM07_009340 PF18075 FtsX extracellular domain BGM07_009345 PF04545 Sigma-70, region 4 BGM07_009345 PF00140 Sigma-70 factor, region 1.2 BGM07_009345 PF04542 Sigma-70 region 2 BGM07_009355 PF00581 Rhodanese-like domain BGM07_009360 PF01694 Rhomboid family BGM07_009360 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease BGM07_009365 PF03748 Flagellar basal body-associated protein FliL BGM07_009370 PF04345 Chorismate lyase BGM07_009375 PF01040 UbiA prenyltransferase family BGM07_009380 PF01553 Acyltransferase BGM07_009390 PF00717 Peptidase S24-like BGM07_009390 PF01726 LexA DNA binding domain BGM07_009395 PF04072 Leucine carboxyl methyltransferase BGM07_009400 PF01554 MatE BGM07_009405 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BGM07_009405 PF07992 Pyridine nucleotide-disulphide oxidoreductase BGM07_009410 PF00440 Bacterial regulatory proteins, tetR family BGM07_009420 PF05958 tRNA (Uracil-5-)-methyltransferase BGM07_009425 PF07715 TonB-dependent Receptor Plug Domain BGM07_009425 PF00593 TonB dependent receptor BGM07_009435 PF01177 Asp/Glu/Hydantoin racemase BGM07_009495 PF13091 PLD-like domain BGM07_009505 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BGM07_009505 PF01565 FAD binding domain BGM07_009510 PF02237 Biotin protein ligase C terminal domain BGM07_009510 PF03099 Biotin/lipoate A/B protein ligase family BGM07_009510 PF08279 HTH domain BGM07_009515 PF00485 Phosphoribulokinase / Uridine kinase family BGM07_009540 PF03143 Elongation factor Tu C-terminal domain BGM07_009540 PF00009 Elongation factor Tu GTP binding domain BGM07_009540 PF03144 Elongation factor Tu domain 2 BGM07_009550 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BGM07_009555 PF00467 KOW motif BGM07_009555 PF02357 Transcription termination factor nusG BGM07_009560 PF00298 Ribosomal protein L11, RNA binding domain BGM07_009560 PF03946 Ribosomal protein L11, N-terminal domain BGM07_009565 PF00687 Ribosomal protein L1p/L10e family BGM07_009570 PF00466 Ribosomal protein L10 BGM07_009575 PF16320 Ribosomal protein L7/L12 dimerisation domain BGM07_009575 PF00542 Ribosomal protein L7/L12 C-terminal domain BGM07_009580 PF04560 RNA polymerase Rpb2, domain 7 BGM07_009580 PF04563 RNA polymerase beta subunit BGM07_009580 PF04561 RNA polymerase Rpb2, domain 2 BGM07_009580 PF04565 RNA polymerase Rpb2, domain 3 BGM07_009580 PF10385 RNA polymerase beta subunit external 1 domain BGM07_009580 PF00562 RNA polymerase Rpb2, domain 6 BGM07_009585 PF04998 RNA polymerase Rpb1, domain 5 BGM07_009585 PF05000 RNA polymerase Rpb1, domain 4 BGM07_009585 PF04983 RNA polymerase Rpb1, domain 3 BGM07_009585 PF00623 RNA polymerase Rpb1, domain 2 BGM07_009585 PF04997 RNA polymerase Rpb1, domain 1 BGM07_009590 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ BGM07_009595 PF09297 NADH pyrophosphatase zinc ribbon domain BGM07_009595 PF00293 NUDIX domain BGM07_009610 PF01208 Uroporphyrinogen decarboxylase (URO-D) BGM07_009615 PF03167 Uracil DNA glycosylase superfamily BGM07_009620 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BGM07_009625 PF04222 Protein of unknown function (DUF416) BGM07_009630 PF00571 CBS domain BGM07_009630 PF01595 Cyclin M transmembrane N-terminal domain BGM07_009635 PF00216 Bacterial DNA-binding protein BGM07_009645 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BGM07_009645 PF02843 Phosphoribosylglycinamide synthetase, C domain BGM07_009645 PF02844 Phosphoribosylglycinamide synthetase, N domain BGM07_009650 PF01808 AICARFT/IMPCHase bienzyme BGM07_009650 PF02142 MGS-like domain BGM07_009660 PF13411 MerR HTH family regulatory protein BGM07_009665 PF18500 CadC C-terminal domain 1 BGM07_009665 PF00486 Transcriptional regulatory protein, C terminal BGM07_009680 PF13520 Amino acid permease BGM07_009685 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BGM07_009685 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain BGM07_009685 PF01276 Orn/Lys/Arg decarboxylase, major domain BGM07_009745 PF13358 DDE superfamily endonuclease BGM07_009750 PF00990 Diguanylate cyclase, GGDEF domain BGM07_009750 PF05230 MASE2 domain BGM07_009755 PF12848 ABC transporter BGM07_009755 PF00005 ABC transporter BGM07_009765 PF02954 Bacterial regulatory protein, Fis family BGM07_009770 PF01207 Dihydrouridine synthase (Dus) BGM07_009780 PF02785 Biotin carboxylase C-terminal domain BGM07_009780 PF00289 Biotin carboxylase, N-terminal domain BGM07_009780 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BGM07_009785 PF00364 Biotin-requiring enzyme BGM07_009790 PF01220 Dehydroquinase class II BGM07_009795 PF16177 Acetyl-coenzyme A synthetase N-terminus BGM07_009795 PF13193 AMP-binding enzyme C-terminal domain BGM07_009795 PF00501 AMP-binding enzyme BGM07_009810 PF12832 MFS_1 like family BGM07_009815 PF00072 Response regulator receiver domain BGM07_009815 PF09308 LuxQ, periplasmic BGM07_009815 PF00512 His Kinase A (phospho-acceptor) domain BGM07_009815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_009820 PF00206 Lyase BGM07_009820 PF10415 Fumarase C C-terminus BGM07_009835 PF00474 Sodium:solute symporter family BGM07_009845 PF03471 Transporter associated domain BGM07_009845 PF00999 Sodium/hydrogen exchanger family BGM07_009845 PF02080 TrkA-C domain BGM07_009850 PF00196 Bacterial regulatory proteins, luxR family BGM07_009850 PF00072 Response regulator receiver domain BGM07_009855 PF02683 Cytochrome C biogenesis protein transmembrane region BGM07_009855 PF11412 Disulphide bond corrector protein DsbC BGM07_009860 PF03605 Anaerobic c4-dicarboxylate membrane transporter BGM07_009865 PF10415 Fumarase C C-terminus BGM07_009865 PF00206 Lyase BGM07_009870 PF04186 FxsA cytoplasmic membrane protein BGM07_009875 PF00588 SpoU rRNA Methylase family BGM07_009880 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BGM07_009880 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BGM07_009885 PF00512 His Kinase A (phospho-acceptor) domain BGM07_009885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_009885 PF00672 HAMP domain BGM07_009885 PF16527 Two-component sensor protein CpxA, periplasmic domain BGM07_009890 PF00072 Response regulator receiver domain BGM07_009890 PF00486 Transcriptional regulatory protein, C terminal BGM07_009895 PF07813 LTXXQ motif family protein BGM07_009900 PF01545 Cation efflux family BGM07_009900 PF16916 Dimerisation domain of Zinc Transporter BGM07_009905 PF00365 Phosphofructokinase BGM07_009910 PF01554 MatE BGM07_009920 PF00166 Chaperonin 10 Kd subunit BGM07_009925 PF00118 TCP-1/cpn60 chaperonin family BGM07_009935 PF02308 MgtC family BGM07_009945 PF00842 Alanine racemase, C-terminal domain BGM07_009945 PF01168 Alanine racemase, N-terminal domain BGM07_009950 PF04055 Radical SAM superfamily BGM07_009955 PF08207 Elongation factor P (EF-P) KOW-like domain BGM07_009955 PF09285 Elongation factor P, C-terminal BGM07_009955 PF01132 Elongation factor P (EF-P) OB domain BGM07_009965 PF02313 Fumarate reductase subunit D BGM07_009970 PF02300 Fumarate reductase subunit C BGM07_009975 PF13183 4Fe-4S dicluster domain BGM07_009975 PF13085 2Fe-2S iron-sulfur cluster binding domain BGM07_009980 PF00890 FAD binding domain BGM07_009980 PF02910 Fumarate reductase flavoprotein C-term BGM07_009990 PF00152 tRNA synthetases class II (D, K and N) BGM07_010000 PF00440 Bacterial regulatory proteins, tetR family BGM07_010000 PF08360 QacR-like protein, C-terminal region BGM07_010010 PF01551 Peptidase family M23 BGM07_010015 PF00132 Bacterial transferase hexapeptide (six repeats) BGM07_010015 PF06426 Serine acetyltransferase, N-terminal BGM07_010020 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BGM07_010020 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BGM07_010025 PF02556 Preprotein translocase subunit SecB BGM07_010030 PF00581 Rhodanese-like domain BGM07_010035 PF01676 Metalloenzyme superfamily BGM07_010035 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BGM07_010045 PF02743 Cache domain BGM07_010045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGM07_010045 PF00672 HAMP domain BGM07_010050 PF00939 Sodium:sulfate symporter transmembrane region BGM07_010055 PF02666 Phosphatidylserine decarboxylase BGM07_010060 PF03193 RsgA GTPase BGM07_010065 PF00929 Exonuclease BGM07_010135 PF08331 Domain of unknown function (DUF1730) BGM07_010140 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BGM07_010145 PF01520 N-acetylmuramoyl-L-alanine amidase BGM07_010150 PF08676 MutL C terminal dimerisation domain BGM07_010150 PF01119 DNA mismatch repair protein, C-terminal domain BGM07_010160 PF17209 Hfq protein BGM07_010165 PF01926 50S ribosome-binding GTPase BGM07_010165 PF16360 GTP-binding GTPase Middle Region BGM07_010165 PF13167 GTP-binding GTPase N-terminal BGM07_010170 PF01145 SPFH domain / Band 7 family BGM07_010170 PF12221 Bacterial membrane protein N terminal BGM07_010175 PF01145 SPFH domain / Band 7 family BGM07_010180 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) BGM07_010185 PF00709 Adenylosuccinate synthetase BGM07_010190 PF08238 Sel1 repeat BGM07_010195 PF00042 Globin BGM07_010195 PF00970 Oxidoreductase FAD-binding domain BGM07_010195 PF00175 Oxidoreductase NAD-binding domain BGM07_010200 PF02082 Transcriptional regulator BGM07_010205 PF17876 Cold shock domain BGM07_010205 PF00575 S1 RNA binding domain BGM07_010205 PF00773 RNB domain BGM07_010205 PF08461 Ribonuclease R winged-helix domain BGM07_010205 PF08206 Ribonuclease B OB domain BGM07_010210 PF08032 RNA 2'-O ribose methyltransferase substrate binding BGM07_010210 PF00588 SpoU rRNA Methylase family BGM07_010215 PF13419 Haloacid dehalogenase-like hydrolase BGM07_010220 PF00579 tRNA synthetases class I (W and Y) BGM07_010235 PF00117 Glutamine amidotransferase class-I BGM07_010240 PF00202 Aminotransferase class-III BGM07_010245 PF04958 Arginine N-succinyltransferase beta subunit BGM07_010250 PF00171 Aldehyde dehydrogenase family BGM07_010260 PF00027 Cyclic nucleotide-binding domain BGM07_010260 PF13545 Crp-like helix-turn-helix domain BGM07_010265 PF00485 Phosphoribulokinase / Uridine kinase family BGM07_010270 PF06794 Uncharacterised protein family (UPF0270) BGM07_010275 PF00561 alpha/beta hydrolase fold BGM07_010285 PF12848 ABC transporter BGM07_010285 PF00005 ABC transporter BGM07_010290 PF02525 Flavodoxin-like fold BGM07_010295 PF02254 TrkA-N domain BGM07_010295 PF00999 Sodium/hydrogen exchanger family BGM07_010305 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BGM07_010315 PF01112 Asparaginase BGM07_010320 PF04102 SlyX BGM07_010330 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BGM07_010330 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BGM07_010335 PF13309 HTH domain BGM07_010335 PF08348 YheO-like PAS domain BGM07_010340 PF02635 DsrE/DsrF-like family BGM07_010345 PF02635 DsrE/DsrF-like family BGM07_010350 PF04077 DsrH like protein BGM07_010355 PF00164 Ribosomal protein S12/S23 BGM07_010360 PF00177 Ribosomal protein S7p/S5e BGM07_010365 PF14492 Elongation Factor G, domain II BGM07_010365 PF03764 Elongation factor G, domain IV BGM07_010365 PF00679 Elongation factor G C-terminus BGM07_010365 PF03144 Elongation factor Tu domain 2 BGM07_010365 PF00009 Elongation factor Tu GTP binding domain BGM07_010370 PF03144 Elongation factor Tu domain 2 BGM07_010370 PF03143 Elongation factor Tu C-terminal domain BGM07_010370 PF00009 Elongation factor Tu GTP binding domain BGM07_010375 PF04324 BFD-like [2Fe-2S] binding domain BGM07_010380 PF00210 Ferritin-like domain BGM07_010385 PF03949 Malic enzyme, NAD binding domain BGM07_010385 PF00390 Malic enzyme, N-terminal domain BGM07_010390 PF01340 Met Apo-repressor, MetJ BGM07_010395 PF01053 Cys/Met metabolism PLP-dependent enzyme BGM07_010400 PF03447 Homoserine dehydrogenase, NAD binding domain BGM07_010400 PF00742 Homoserine dehydrogenase BGM07_010400 PF00696 Amino acid kinase family BGM07_010405 PF02219 Methylenetetrahydrofolate reductase BGM07_010415 PF00311 Phosphoenolpyruvate carboxylase BGM07_010420 PF07687 Peptidase dimerisation domain BGM07_010420 PF01546 Peptidase family M20/M25/M40 BGM07_010425 PF02774 Semialdehyde dehydrogenase, dimerisation domain BGM07_010425 PF01118 Semialdehyde dehydrogenase, NAD binding domain BGM07_010430 PF00696 Amino acid kinase family BGM07_010435 PF00764 Arginosuccinate synthase BGM07_010440 PF14698 Argininosuccinate lyase C-terminal BGM07_010440 PF00206 Lyase BGM07_010440 PF00583 Acetyltransferase (GNAT) family BGM07_010455 PF00462 Glutaredoxin BGM07_010455 PF08534 Redoxin BGM07_010460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_010460 PF03466 LysR substrate binding domain BGM07_010465 PF17092 Penicillin-binding protein OB-like domain BGM07_010465 PF00912 Transglycosylase BGM07_010465 PF00905 Penicillin binding protein transpeptidase domain BGM07_010490 PF00263 Bacterial type II and III secretion system protein BGM07_010490 PF03958 Bacterial type II/III secretion system short domain BGM07_010490 PF07660 Secretin and TonB N terminus short domain BGM07_010490 PF11741 AMIN domain BGM07_010495 PF01202 Shikimate kinase BGM07_010500 PF01761 3-dehydroquinate synthase BGM07_010510 PF02086 D12 class N6 adenine-specific DNA methyltransferase BGM07_010515 PF00834 Ribulose-phosphate 3 epimerase family BGM07_010520 PF01250 Ribosomal protein S6 BGM07_010525 PF00436 Single-strand binding protein family BGM07_010530 PF01084 Ribosomal protein S18 BGM07_010535 PF01281 Ribosomal protein L9, N-terminal domain BGM07_010535 PF03948 Ribosomal protein L9, C-terminal domain BGM07_010545 PF00772 DnaB-like helicase N terminal domain BGM07_010545 PF03796 DnaB-like helicase C terminal domain BGM07_010550 PF00842 Alanine racemase, C-terminal domain BGM07_010550 PF01168 Alanine racemase, N-terminal domain BGM07_010560 PF01894 Uncharacterised protein family UPF0047 BGM07_010565 PF00342 Phosphoglucose isomerase BGM07_010575 PF01475 Ferric uptake regulator family BGM07_010580 PF01207 Dihydrouridine synthase (Dus) BGM07_010600 PF00258 Flavodoxin BGM07_010600 PF00667 FAD binding domain BGM07_010600 PF00175 Oxidoreductase NAD-binding domain BGM07_010605 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BGM07_010605 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BGM07_010610 PF01507 Phosphoadenosine phosphosulfate reductase family BGM07_010680 PF00999 Sodium/hydrogen exchanger family BGM07_010750 PF00999 Sodium/hydrogen exchanger family BGM07_010755 PF02310 B12 binding domain BGM07_010755 PF00809 Pterin binding enzyme BGM07_010755 PF02965 Vitamin B12 dependent methionine synthase, activation domain BGM07_010755 PF02574 Homocysteine S-methyltransferase BGM07_010755 PF02607 B12 binding domain BGM07_010760 PF01842 ACT domain BGM07_010760 PF00696 Amino acid kinase family BGM07_010770 PF00266 Aminotransferase class-V BGM07_010780 PF17755 UvrA DNA-binding domain BGM07_010780 PF17760 UvrA interaction domain BGM07_010780 PF00005 ABC transporter BGM07_010785 PF00483 Nucleotidyl transferase BGM07_010790 PF00196 Bacterial regulatory proteins, luxR family BGM07_010795 PF00436 Single-strand binding protein family BGM07_010800 PF00563 EAL domain BGM07_010800 PF00990 Diguanylate cyclase, GGDEF domain BGM07_010800 PF17157 Gammaproteobacterial periplasmic sensor domain BGM07_010820 PF00263 Bacterial type II and III secretion system protein BGM07_010820 PF07660 Secretin and TonB N terminus short domain BGM07_010820 PF11741 AMIN domain BGM07_010820 PF03958 Bacterial type II/III secretion system short domain BGM07_010825 PF13401 AAA domain BGM07_010825 PF01471 Putative peptidoglycan binding domain BGM07_010835 PF00437 Type II/IV secretion system protein BGM07_010835 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BGM07_010840 PF00482 Type II secretion system (T2SS), protein F BGM07_010850 PF07963 Prokaryotic N-terminal methylation motif BGM07_010850 PF08334 Type II secretion system (T2SS), protein G BGM07_010890 PF04085 rod shape-determining protein MreC BGM07_010895 PF04093 rod shape-determining protein MreD BGM07_010900 PF02545 Maf-like protein BGM07_010905 PF10150 Ribonuclease E/G family BGM07_010905 PF00575 S1 RNA binding domain BGM07_010910 PF13116 Protein of unknown function BGM07_010910 PF13502 AsmA-like C-terminal region BGM07_010915 PF00795 Carbon-nitrogen hydrolase BGM07_010920 PF01523 Putative modulator of DNA gyrase BGM07_010925 PF02562 PhoH-like protein BGM07_010925 PF13638 PIN domain BGM07_010930 PF00176 SNF2 family N-terminal domain BGM07_010930 PF12137 RNA polymerase recycling family C-terminal BGM07_010930 PF00271 Helicase conserved C-terminal domain BGM07_010930 PF18339 RapA N-terminal Tudor like domain 1 BGM07_010930 PF18337 RapA N-terminal Tudor like domain BGM07_010945 PF00849 RNA pseudouridylate synthase BGM07_010950 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BGM07_010950 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BGM07_010955 PF04751 Protein of unknown function (DUF615) BGM07_010960 PF01523 Putative modulator of DNA gyrase BGM07_010965 PF03448 MgtE intracellular N domain BGM07_010965 PF01769 Divalent cation transporter BGM07_010965 PF00571 CBS domain BGM07_010970 PF00381 PTS HPr component phosphorylation site BGM07_010975 PF03668 P-loop ATPase protein family BGM07_010980 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BGM07_010985 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BGM07_010990 PF04552 Sigma-54, DNA binding domain BGM07_010990 PF00309 Sigma-54 factor, Activator interacting domain (AID) BGM07_010990 PF04963 Sigma-54 factor, core binding domain BGM07_010995 PF00005 ABC transporter BGM07_010995 PF12399 Branched-chain amino acid ATP-binding cassette transporter BGM07_011000 PF03968 OstA-like protein BGM07_011010 PF00571 CBS domain BGM07_011010 PF01380 SIS domain BGM07_011015 PF01699 Sodium/calcium exchanger protein BGM07_011020 PF00005 ABC transporter BGM07_011025 PF02405 Permease MlaE BGM07_011030 PF02470 MlaD protein BGM07_011035 PF05494 MlaC protein BGM07_011045 PF01722 BolA-like protein BGM07_011050 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BGM07_011055 PF01553 Acyltransferase BGM07_011060 PF01042 Endoribonuclease L-PSP BGM07_011065 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain BGM07_011065 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain BGM07_011070 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BGM07_011070 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BGM07_011080 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BGM07_011080 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BGM07_011095 PF06877 Regulator of ribonuclease activity B BGM07_011105 PF00583 Acetyltransferase (GNAT) family BGM07_011115 PF08264 Anticodon-binding domain of tRNA BGM07_011115 PF10458 Valyl tRNA synthetase tRNA binding arm BGM07_011115 PF00133 tRNA synthetases class I (I, L, M and V) BGM07_011120 PF04364 DNA polymerase III chi subunit, HolC BGM07_011125 PF02789 Cytosol aminopeptidase family, N-terminal domain BGM07_011125 PF00883 Cytosol aminopeptidase family, catalytic domain BGM07_011130 PF03739 Lipopolysaccharide export system permease LptF/LptG BGM07_011135 PF03739 Lipopolysaccharide export system permease LptF/LptG BGM07_011145 PF10011 Predicted membrane protein (DUF2254) BGM07_011150 PF00106 short chain dehydrogenase BGM07_011160 PF08360 QacR-like protein, C-terminal region BGM07_011160 PF00440 Bacterial regulatory proteins, tetR family BGM07_011170 PF13533 Biotin-lipoyl like BGM07_011180 PF01522 Polysaccharide deacetylase BGM07_011185 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BGM07_011190 PF02378 Phosphotransferase system, EIIC BGM07_011195 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BGM07_011200 PF11975 Family 4 glycosyl hydrolase C-terminal domain BGM07_011200 PF02056 Family 4 glycosyl hydrolase BGM07_011205 PF04794 YdjC-like protein BGM07_011210 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BGM07_011210 PF00356 Bacterial regulatory proteins, lacI family BGM07_011270 PF00171 Aldehyde dehydrogenase family BGM07_011300 PF17200 Single Cache domain 2 BGM07_011300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGM07_011300 PF00672 HAMP domain BGM07_011340 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain BGM07_011340 PF01464 Transglycosylase SLT domain BGM07_011345 PF04362 Bacterial Fe(2+) trafficking BGM07_011350 PF14815 NUDIX domain BGM07_011350 PF00633 Helix-hairpin-helix motif BGM07_011350 PF00730 HhH-GPD superfamily base excision DNA repair protein BGM07_011355 PF02390 Putative methyltransferase BGM07_011360 PF02086 D12 class N6 adenine-specific DNA methyltransferase BGM07_011365 PF04960 Glutaminase BGM07_011370 PF06969 HemN C-terminal domain BGM07_011370 PF04055 Radical SAM superfamily BGM07_011375 PF01725 Ham1 family BGM07_011385 PF02594 Uncharacterised ACR, YggU family COG1872 BGM07_011390 PF02325 YGGT family BGM07_011395 PF03807 NADP oxidoreductase coenzyme F420-dependent BGM07_011395 PF14748 Pyrroline-5-carboxylate reductase dimerisation BGM07_011400 PF01168 Alanine racemase, N-terminal domain BGM07_011405 PF00437 Type II/IV secretion system protein BGM07_011410 PF00437 Type II/IV secretion system protein BGM07_011415 PF03652 Holliday junction resolvase BGM07_011420 PF02622 Uncharacterized ACR, COG1678 BGM07_011425 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BGM07_011425 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BGM07_011430 PF04452 RNA methyltransferase BGM07_011435 PF04231 Endonuclease I BGM07_011440 PF10263 SprT-like family BGM07_011440 PF17283 SprT-like zinc ribbon domain BGM07_011450 PF00438 S-adenosylmethionine synthetase, N-terminal domain BGM07_011450 PF02772 S-adenosylmethionine synthetase, central domain BGM07_011450 PF02773 S-adenosylmethionine synthetase, C-terminal domain BGM07_011460 PF00456 Transketolase, thiamine diphosphate binding domain BGM07_011460 PF02780 Transketolase, C-terminal domain BGM07_011460 PF02779 Transketolase, pyrimidine binding domain BGM07_011465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_011465 PF03466 LysR substrate binding domain BGM07_011470 PF07715 TonB-dependent Receptor Plug Domain BGM07_011470 PF00593 TonB dependent receptor BGM07_011475 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BGM07_011475 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BGM07_011480 PF00162 Phosphoglycerate kinase BGM07_011485 PF01116 Fructose-bisphosphate aldolase class-II BGM07_011490 PF05552 Conserved TM helix BGM07_011490 PF00924 Mechanosensitive ion channel BGM07_011495 PF04073 Aminoacyl-tRNA editing domain BGM07_011500 PF01810 LysE type translocator BGM07_011505 PF03466 LysR substrate binding domain BGM07_011505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_011510 PF04402 Protein of unknown function (DUF541) BGM07_011515 PF01842 ACT domain BGM07_011515 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BGM07_011515 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BGM07_011520 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BGM07_011525 PF01812 5-formyltetrahydrofolate cyclo-ligase family BGM07_011535 PF05164 Cell division protein ZapA BGM07_011540 PF03695 Uncharacterised protein family (UPF0149) BGM07_011545 PF01494 FAD binding domain BGM07_011550 PF01494 FAD binding domain BGM07_011565 PF01571 Aminomethyltransferase folate-binding domain BGM07_011570 PF03937 Flavinator of succinate dehydrogenase BGM07_011580 PF02910 Fumarate reductase flavoprotein C-term BGM07_011580 PF00890 FAD binding domain BGM07_011585 PF08281 Sigma-70, region 4 BGM07_011585 PF04542 Sigma-70 region 2 BGM07_011590 PF03873 Anti sigma-E protein RseA, C-terminal domain BGM07_011590 PF03872 Anti sigma-E protein RseA, N-terminal domain BGM07_011595 PF17188 MucB/RseB C-terminal domain BGM07_011595 PF03888 MucB/RseB N-terminal domain BGM07_011605 PF06421 GTP-binding protein LepA C-terminus BGM07_011605 PF00009 Elongation factor Tu GTP binding domain BGM07_011605 PF03144 Elongation factor Tu domain 2 BGM07_011605 PF00679 Elongation factor G C-terminus BGM07_011610 PF10502 Signal peptidase, peptidase S26 BGM07_011615 PF14622 Ribonuclease-III-like BGM07_011615 PF00035 Double-stranded RNA binding motif BGM07_011620 PF07650 KH domain BGM07_011620 PF01926 50S ribosome-binding GTPase BGM07_011625 PF02565 Recombination protein O C terminal BGM07_011625 PF11967 Recombination protein O N terminal BGM07_011630 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BGM07_011635 PF01648 4'-phosphopantetheinyl transferase superfamily BGM07_011640 PF00512 His Kinase A (phospho-acceptor) domain BGM07_011640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_011640 PF00072 Response regulator receiver domain BGM07_011640 PF01627 Hpt domain BGM07_011640 PF00672 HAMP domain BGM07_011640 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BGM07_011650 PF05958 tRNA (Uracil-5-)-methyltransferase BGM07_011650 PF01938 TRAM domain BGM07_011655 PF13291 ACT domain BGM07_011655 PF04607 Region found in RelA / SpoT proteins BGM07_011655 PF02824 TGS domain BGM07_011660 PF03819 MazG nucleotide pyrophosphohydrolase domain BGM07_011665 PF00117 Glutamine amidotransferase class-I BGM07_011665 PF06418 CTP synthase N-terminus BGM07_011670 PF00113 Enolase, C-terminal TIM barrel domain BGM07_011670 PF03952 Enolase, N-terminal domain BGM07_011675 PF04977 Septum formation initiator BGM07_011680 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BGM07_011685 PF02542 YgbB family BGM07_011690 PF01142 tRNA pseudouridine synthase D (TruD) BGM07_011695 PF01975 Survival protein SurE BGM07_011705 PF01476 LysM domain BGM07_011705 PF01551 Peptidase family M23 BGM07_011715 PF00488 MutS domain V BGM07_011715 PF05190 MutS family domain IV BGM07_011715 PF05188 MutS domain II BGM07_011715 PF05192 MutS domain III BGM07_011715 PF01624 MutS domain I BGM07_011720 PF02464 Competence-damaged protein BGM07_011725 PF00154 recA bacterial DNA recombination protein BGM07_011730 PF02631 RecX family BGM07_011735 PF02272 DHHA1 domain BGM07_011735 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BGM07_011735 PF01411 tRNA synthetases class II (A) BGM07_011740 PF00696 Amino acid kinase family BGM07_011740 PF01842 ACT domain BGM07_011740 PF13840 ACT domain BGM07_011745 PF02599 Global regulator protein family BGM07_011800 PF04277 Oxaloacetate decarboxylase, gamma chain BGM07_011805 PF00364 Biotin-requiring enzyme BGM07_011805 PF02436 Conserved carboxylase domain BGM07_011805 PF00682 HMGL-like BGM07_011810 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit BGM07_011820 PF09335 SNARE associated Golgi protein BGM07_011825 PF05193 Peptidase M16 inactive domain BGM07_011825 PF00675 Insulinase (Peptidase family M16) BGM07_011830 PF04262 Glutamate-cysteine ligase BGM07_011840 PF02664 S-Ribosylhomocysteinase (LuxS) BGM07_011845 PF03471 Transporter associated domain BGM07_011845 PF00571 CBS domain BGM07_011845 PF01595 Cyclin M transmembrane N-terminal domain BGM07_011850 PF01578 Cytochrome C assembly protein BGM07_011855 PF02978 Signal peptide binding domain BGM07_011855 PF02881 SRP54-type protein, helical bundle domain BGM07_011855 PF00448 SRP54-type protein, GTPase domain BGM07_011860 PF00886 Ribosomal protein S16 BGM07_011865 PF05239 PRC-barrel domain BGM07_011865 PF01782 RimM N-terminal domain BGM07_011870 PF01746 tRNA (Guanine-1)-methyltransferase BGM07_011875 PF01245 Ribosomal protein L19 BGM07_011880 PF03884 DNA gyrase inhibitor YacG BGM07_011885 PF07072 Cell division protein BGM07_011890 PF01121 Dephospho-CoA kinase BGM07_011895 PF06750 Bacterial Peptidase A24 N-terminal domain BGM07_011895 PF01478 Type IV leader peptidase family BGM07_011900 PF00482 Type II secretion system (T2SS), protein F BGM07_011905 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BGM07_011905 PF00437 Type II/IV secretion system protein BGM07_011910 PF07963 Prokaryotic N-terminal methylation motif BGM07_011915 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BGM07_011915 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BGM07_011920 PF01510 N-acetylmuramoyl-L-alanine amidase BGM07_011925 PF07729 FCD domain BGM07_011925 PF00392 Bacterial regulatory proteins, gntR family BGM07_011930 PF00456 Transketolase, thiamine diphosphate binding domain BGM07_011930 PF17831 Pyruvate dehydrogenase E1 component middle domain BGM07_011935 PF00364 Biotin-requiring enzyme BGM07_011935 PF02817 e3 binding domain BGM07_011935 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BGM07_011940 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BGM07_011940 PF07992 Pyridine nucleotide-disulphide oxidoreductase BGM07_011945 PF00440 Bacterial regulatory proteins, tetR family BGM07_011950 PF00156 Phosphoribosyl transferase domain BGM07_011955 PF00484 Carbonic anhydrase BGM07_011960 PF00916 Sulfate permease family BGM07_011960 PF01740 STAS domain BGM07_011965 PF00005 ABC transporter BGM07_011970 PF01061 ABC-2 type transporter BGM07_011980 PF03279 Bacterial lipid A biosynthesis acyltransferase BGM07_011985 PF02569 Pantoate-beta-alanine ligase BGM07_011990 PF02548 Ketopantoate hydroxymethyltransferase BGM07_011995 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BGM07_012000 PF12627 Probable RNA and SrmB- binding site of polymerase A BGM07_012000 PF12626 Polymerase A arginine-rich C-terminus BGM07_012000 PF01743 Poly A polymerase head domain BGM07_012005 PF00749 tRNA synthetases class I (E and Q), catalytic domain BGM07_012010 PF01258 Prokaryotic dksA/traR C4-type zinc finger BGM07_012015 PF03749 Sugar fermentation stimulation protein RE domain BGM07_012015 PF17746 SfsA N-terminal OB domain BGM07_012020 PF08482 ATP-dependent helicase C-terminal BGM07_012020 PF00271 Helicase conserved C-terminal domain BGM07_012020 PF04408 Helicase associated domain (HA2) BGM07_012020 PF00270 DEAD/DEAH box helicase BGM07_012025 PF14814 Bifunctional transglycosylase second domain BGM07_012025 PF00905 Penicillin binding protein transpeptidase domain BGM07_012025 PF00912 Transglycosylase BGM07_012030 PF01734 Patatin-like phospholipase BGM07_012035 PF11791 Aconitate B N-terminal domain BGM07_012035 PF06434 Aconitate hydratase 2 N-terminus BGM07_012035 PF00330 Aconitase family (aconitate hydratase) BGM07_012040 PF06062 Uncharacterised protein family (UPF0231) BGM07_012045 PF00543 Nitrogen regulatory protein P-II BGM07_012050 PF00909 Ammonium Transporter Family BGM07_012055 PF13416 Bacterial extracellular solute-binding protein BGM07_012065 PF00005 ABC transporter BGM07_012065 PF08402 TOBE domain BGM07_012070 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BGM07_012070 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BGM07_012070 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BGM07_012075 PF06165 Glycosyltransferase family 36 BGM07_012075 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain BGM07_012080 PF02838 Glycosyl hydrolase family 20, domain 2 BGM07_012080 PF00728 Glycosyl hydrolase family 20, catalytic domain BGM07_012085 PF01869 BadF/BadG/BcrA/BcrD ATPase family BGM07_012095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BGM07_012095 PF00005 ABC transporter BGM07_012100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BGM07_012100 PF00005 ABC transporter BGM07_012105 PF12911 N-terminal TM domain of oligopeptide transport permease C BGM07_012105 PF00528 Binding-protein-dependent transport system inner membrane component BGM07_012110 PF00528 Binding-protein-dependent transport system inner membrane component BGM07_012115 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BGM07_012120 PF00497 Bacterial extracellular solute-binding proteins, family 3 BGM07_012120 PF00512 His Kinase A (phospho-acceptor) domain BGM07_012120 PF00072 Response regulator receiver domain BGM07_012120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_012130 PF05175 Methyltransferase small domain BGM07_012130 PF08468 Methyltransferase small domain N-terminal BGM07_012135 PF01594 AI-2E family transporter BGM07_012140 PF00202 Aminotransferase class-III BGM07_012145 PF01521 Iron-sulphur cluster biosynthesis BGM07_012155 PF00873 AcrB/AcrD/AcrF family BGM07_012160 PF01551 Peptidase family M23 BGM07_012160 PF01476 LysM domain BGM07_012160 PF08525 Opacity-associated protein A N-terminal motif BGM07_012165 PF00579 tRNA synthetases class I (W and Y) BGM07_012175 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family BGM07_012180 PF13609 Gram-negative porin BGM07_012185 PF01272 Transcription elongation factor, GreA/GreB, C-term BGM07_012185 PF03449 Transcription elongation factor, N-terminal BGM07_012190 PF01985 CRS1 / YhbY (CRM) domain BGM07_012195 PF01728 FtsJ-like methyltransferase BGM07_012200 PF00004 ATPase family associated with various cellular activities (AAA) BGM07_012200 PF17862 AAA+ lid domain BGM07_012200 PF06480 FtsH Extracellular BGM07_012200 PF01434 Peptidase family M41 BGM07_012205 PF00809 Pterin binding enzyme BGM07_012210 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BGM07_012210 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BGM07_012210 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BGM07_012210 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BGM07_012220 PF03840 Preprotein translocase SecG subunit BGM07_012235 PF17384 RimP C-terminal SH3 domain BGM07_012235 PF02576 RimP N-terminal domain BGM07_012240 PF00575 S1 RNA binding domain BGM07_012240 PF08529 NusA N-terminal domain BGM07_012240 PF13184 NusA-like KH domain BGM07_012245 PF04760 Translation initiation factor IF-2, N-terminal region BGM07_012245 PF08364 Bacterial translation initiation factor IF-2 associated region BGM07_012245 PF11987 Translation-initiation factor 2 BGM07_012245 PF00009 Elongation factor Tu GTP binding domain BGM07_012250 PF02033 Ribosome-binding factor A BGM07_012255 PF01509 TruB family pseudouridylate synthase (N terminal domain) BGM07_012255 PF16198 tRNA pseudouridylate synthase B C-terminal domain BGM07_012255 PF09157 Pseudouridine synthase II TruB, C-terminal BGM07_012260 PF00312 Ribosomal protein S15 BGM07_012265 PF01138 3' exoribonuclease family, domain 1 BGM07_012265 PF03725 3' exoribonuclease family, domain 2 BGM07_012265 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BGM07_012265 PF00575 S1 RNA binding domain BGM07_012265 PF00013 KH domain BGM07_012270 PF07719 Tetratricopeptide repeat BGM07_012270 PF13181 Tetratricopeptide repeat BGM07_012280 PF01554 MatE BGM07_012295 PF00563 EAL domain BGM07_012295 PF00990 Diguanylate cyclase, GGDEF domain BGM07_012295 PF03707 Bacterial signalling protein N terminal repeat BGM07_012305 PF13508 Acetyltransferase (GNAT) domain BGM07_012325 PF16658 Class II release factor RF3, C-terminal domain BGM07_012325 PF03144 Elongation factor Tu domain 2 BGM07_012325 PF00009 Elongation factor Tu GTP binding domain BGM07_012335 PF01026 TatD related DNase BGM07_012340 PF01773 Na+ dependent nucleoside transporter N-terminus BGM07_012340 PF07662 Na+ dependent nucleoside transporter C-terminus BGM07_012340 PF07670 Nucleoside recognition BGM07_012345 PF01791 DeoC/LacD family aldolase BGM07_012350 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BGM07_012350 PF00591 Glycosyl transferase family, a/b domain BGM07_012350 PF02885 Glycosyl transferase family, helical bundle domain BGM07_012355 PF01676 Metalloenzyme superfamily BGM07_012360 PF01048 Phosphorylase superfamily BGM07_012370 PF18429 Domain of unknown function (DUF5609) BGM07_012380 PF18073 Rubredoxin metal binding domain BGM07_012385 PF00009 Elongation factor Tu GTP binding domain BGM07_012385 PF00679 Elongation factor G C-terminus BGM07_012385 PF14492 Elongation Factor G, domain II BGM07_012385 PF03144 Elongation factor Tu domain 2 BGM07_012385 PF03764 Elongation factor G, domain IV BGM07_012390 PF03466 LysR substrate binding domain BGM07_012390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_012400 PF00501 AMP-binding enzyme BGM07_012405 PF12833 Helix-turn-helix domain BGM07_012405 PF02805 Metal binding domain of Ada BGM07_012430 PF04972 BON domain BGM07_012430 PF00263 Bacterial type II and III secretion system protein BGM07_012430 PF13629 Pilus formation protein N terminal region BGM07_012460 PF00437 Type II/IV secretion system protein BGM07_012490 PF03466 LysR substrate binding domain BGM07_012490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_012495 PF13520 Amino acid permease BGM07_012500 PF04074 YhcH/YjgK/YiaL BGM07_012505 PF16353 Domain of unknown function(DUF4981) BGM07_012505 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BGM07_012505 PF02929 Beta galactosidase small chain BGM07_012505 PF02837 Glycosyl hydrolases family 2, sugar binding domain BGM07_012505 PF00703 Glycosyl hydrolases family 2 BGM07_012510 PF00356 Bacterial regulatory proteins, lacI family BGM07_012515 PF16363 GDP-mannose 4,6 dehydratase BGM07_012520 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain BGM07_012520 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain BGM07_012525 PF10509 Galactokinase galactose-binding signature BGM07_012525 PF08544 GHMP kinases C terminal BGM07_012525 PF00288 GHMP kinases N terminal domain BGM07_012530 PF01263 Aldose 1-epimerase BGM07_012535 PF00474 Sodium:solute symporter family BGM07_012545 PF07733 Bacterial DNA polymerase III alpha NTPase domain BGM07_012545 PF14579 Helix-hairpin-helix motif BGM07_012545 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BGM07_012545 PF00929 Exonuclease BGM07_012545 PF02811 PHP domain BGM07_012550 PF00356 Bacterial regulatory proteins, lacI family BGM07_012555 PF01588 Putative tRNA binding domain BGM07_012575 PF01544 CorA-like Mg2+ transporter protein BGM07_012580 PF01266 FAD dependent oxidoreductase BGM07_012580 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BGM07_012585 PF08220 DeoR-like helix-turn-helix domain BGM07_012585 PF00455 DeoR C terminal sensor domain BGM07_012590 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BGM07_012590 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BGM07_012595 PF00230 Major intrinsic protein BGM07_012605 PF07690 Major Facilitator Superfamily BGM07_012610 PF03009 Glycerophosphoryl diester phosphodiesterase family BGM07_012615 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle BGM07_012615 PF14602 Hexapeptide repeat of succinyl-transferase BGM07_012620 PF07130 YebG protein BGM07_012625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_012625 PF03466 LysR substrate binding domain BGM07_012635 PF11893 Domain of unknown function (DUF3413) BGM07_012635 PF00884 Sulfatase BGM07_012640 PF17946 RecC C-terminal domain BGM07_012650 PF12705 PD-(D/E)XK nuclease superfamily BGM07_012650 PF00580 UvrD/REP helicase N-terminal domain BGM07_012650 PF13361 UvrD-like helicase C-terminal domain BGM07_012655 PF13538 UvrD-like helicase C-terminal domain BGM07_012675 PF00696 Amino acid kinase family BGM07_012675 PF00583 Acetyltransferase (GNAT) family BGM07_012690 PF06725 3D domain BGM07_012690 PF03562 MltA specific insert domain BGM07_012695 PF00899 ThiF family BGM07_012700 PF02657 Fe-S metabolism associated domain BGM07_012705 PF00990 Diguanylate cyclase, GGDEF domain BGM07_012705 PF17158 Membrane-associated sensor, integral membrane domain BGM07_012710 PF00266 Aminotransferase class-V BGM07_012715 PF01965 DJ-1/PfpI family BGM07_012720 PF02558 Ketopantoate reductase PanE/ApbA BGM07_012720 PF08546 Ketopantoate reductase PanE/ApbA C terminal BGM07_012725 PF03502 Nucleoside-specific channel-forming protein, Tsx BGM07_012750 PF04542 Sigma-70 region 2 BGM07_012750 PF04545 Sigma-70, region 4 BGM07_012760 PF07690 Major Facilitator Superfamily BGM07_012765 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BGM07_012770 PF03923 Uncharacterized lipoprotein BGM07_012770 PF08139 Prokaryotic membrane lipoprotein lipid attachment site BGM07_012775 PF05175 Methyltransferase small domain BGM07_012780 PF01722 BolA-like protein BGM07_012790 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) BGM07_012790 PF11973 NQRA C-terminal domain BGM07_012795 PF03116 NQR2, RnfD, RnfE family BGM07_012800 PF04205 FMN-binding domain BGM07_012805 PF02508 Rnf-Nqr subunit, membrane protein BGM07_012810 PF02508 Rnf-Nqr subunit, membrane protein BGM07_012815 PF00175 Oxidoreductase NAD-binding domain BGM07_012815 PF00111 2Fe-2S iron-sulfur cluster binding domain BGM07_012815 PF00970 Oxidoreductase FAD-binding domain BGM07_012820 PF02424 ApbE family BGM07_012835 PF00817 impB/mucB/samB family BGM07_012835 PF11798 IMS family HHH motif BGM07_012835 PF11799 impB/mucB/samB family C-terminal domain BGM07_012840 PF00570 HRDC domain BGM07_012840 PF00270 DEAD/DEAH box helicase BGM07_012840 PF00271 Helicase conserved C-terminal domain BGM07_012840 PF16124 RecQ zinc-binding BGM07_012840 PF09382 RQC domain BGM07_012845 PF03449 Transcription elongation factor, N-terminal BGM07_012845 PF01272 Transcription elongation factor, GreA/GreB, C-term BGM07_012860 PF00209 Sodium:neurotransmitter symporter family BGM07_012870 PF06786 Uncharacterised protein family (UPF0253) BGM07_012880 PF03129 Anticodon binding domain BGM07_012880 PF04073 Aminoacyl-tRNA editing domain BGM07_012880 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BGM07_012885 PF18389 TrmO C-terminal domain BGM07_012885 PF01980 tRNA-methyltransferase O BGM07_012890 PF01197 Ribosomal protein L31 BGM07_012895 PF00444 Ribosomal protein L36 BGM07_012905 PF03806 AbgT putative transporter family BGM07_012910 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BGM07_012935 PF04287 tRNA pseudouridine synthase C BGM07_012940 PF00849 RNA pseudouridylate synthase BGM07_012945 PF11944 Protein of unknown function (DUF3461) BGM07_012950 PF01842 ACT domain BGM07_012950 PF01966 HD domain BGM07_012950 PF01909 Nucleotidyltransferase domain BGM07_012950 PF08335 GlnD PII-uridylyltransferase BGM07_012955 PF00557 Metallopeptidase family M24 BGM07_012960 PF00318 Ribosomal protein S2 BGM07_012965 PF00889 Elongation factor TS BGM07_012970 PF00696 Amino acid kinase family BGM07_012975 PF01765 Ribosome recycling factor BGM07_012980 PF01255 Putative undecaprenyl diphosphate synthase BGM07_012990 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BGM07_012990 PF13288 DXP reductoisomerase C-terminal domain BGM07_012990 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BGM07_012995 PF17820 PDZ domain BGM07_012995 PF02163 Peptidase family M50 BGM07_013000 PF01103 Surface antigen BGM07_013000 PF07244 Surface antigen variable number repeat BGM07_013005 PF03938 Outer membrane protein (OmpH-like) BGM07_013010 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BGM07_013010 PF00132 Bacterial transferase hexapeptide (six repeats) BGM07_013015 PF07977 FabA-like domain BGM07_013020 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BGM07_013020 PF00132 Bacterial transferase hexapeptide (six repeats) BGM07_013025 PF02684 Lipid-A-disaccharide synthetase BGM07_013030 PF01351 Ribonuclease HII BGM07_013035 PF02811 PHP domain BGM07_013035 PF14579 Helix-hairpin-helix motif BGM07_013035 PF07733 Bacterial DNA polymerase III alpha NTPase domain BGM07_013035 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BGM07_013035 PF01336 OB-fold nucleic acid binding domain BGM07_013040 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BGM07_013045 PF01171 PP-loop family BGM07_013045 PF09179 TilS substrate binding domain BGM07_013045 PF11734 TilS substrate C-terminal domain BGM07_013050 PF00034 Cytochrome c BGM07_013055 PF00543 Nitrogen regulatory protein P-II BGM07_013060 PF03372 Endonuclease/Exonuclease/phosphatase family BGM07_013070 PF01464 Transglycosylase SLT domain BGM07_013070 PF01476 LysM domain BGM07_013075 PF00753 Metallo-beta-lactamase superfamily BGM07_013075 PF16123 Hydroxyacylglutathione hydrolase C-terminus BGM07_013080 PF08241 Methyltransferase domain BGM07_013085 PF00075 RNase H BGM07_013090 PF00929 Exonuclease BGM07_013100 PF01740 STAS domain BGM07_013100 PF00916 Sulfate permease family BGM07_013105 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BGM07_013105 PF09317 Domain of unknown function (DUF1974) BGM07_013105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BGM07_013105 PF02770 Acyl-CoA dehydrogenase, middle domain BGM07_013110 PF13580 SIS domain BGM07_013115 PF13230 Glutamine amidotransferases class-II BGM07_013120 PF00551 Formyl transferase BGM07_013125 PF02769 AIR synthase related protein, C-terminal domain BGM07_013125 PF00586 AIR synthase related protein, N-terminal domain BGM07_013135 PF00860 Permease family BGM07_013155 PF01435 Peptidase family M48 BGM07_013155 PF13181 Tetratricopeptide repeat BGM07_013165 PF01594 AI-2E family transporter BGM07_013170 PF00578 AhpC/TSA family BGM07_013175 PF01842 ACT domain BGM07_013180 PF00701 Dihydrodipicolinate synthetase family BGM07_013200 PF07687 Peptidase dimerisation domain BGM07_013200 PF01546 Peptidase family M20/M25/M40 BGM07_013205 PF03960 ArsC family BGM07_013230 PF11143 Protein of unknown function (DUF2919) BGM07_013235 PF04261 Dyp-type peroxidase family BGM07_013240 PF07196 Flagellin hook IN motif BGM07_013240 PF00669 Bacterial flagellin N-terminal helical region BGM07_013240 PF00700 Bacterial flagellin C-terminal helical region BGM07_013250 PF00669 Bacterial flagellin N-terminal helical region BGM07_013250 PF07196 Flagellin hook IN motif BGM07_013250 PF00700 Bacterial flagellin C-terminal helical region BGM07_013255 PF00700 Bacterial flagellin C-terminal helical region BGM07_013255 PF07196 Flagellin hook IN motif BGM07_013255 PF00669 Bacterial flagellin N-terminal helical region BGM07_013260 PF03646 FlaG protein BGM07_013265 PF02465 Flagellar hook-associated protein 2 N-terminus BGM07_013265 PF07195 Flagellar hook-associated protein 2 C-terminus BGM07_013265 PF07196 Flagellin hook IN motif BGM07_013275 PF02561 Flagellar protein FliS BGM07_013280 PF02954 Bacterial regulatory protein, Fis family BGM07_013280 PF01590 GAF domain BGM07_013280 PF00158 Sigma-54 interaction domain BGM07_013285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_013285 PF00512 His Kinase A (phospho-acceptor) domain BGM07_013290 PF00158 Sigma-54 interaction domain BGM07_013290 PF00072 Response regulator receiver domain BGM07_013290 PF02954 Bacterial regulatory protein, Fis family BGM07_013295 PF02049 Flagellar hook-basal body complex protein FliE BGM07_013300 PF08345 Flagellar M-ring protein C-terminal BGM07_013300 PF01514 Secretory protein of YscJ/FliF family BGM07_013305 PF01706 FliG C-terminal domain BGM07_013305 PF14842 FliG N-terminal domain BGM07_013305 PF14841 FliG middle domain BGM07_013315 PF18269 T3SS EscN ATPase C-terminal domain BGM07_013315 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BGM07_013335 PF02154 Flagellar motor switch protein FliM BGM07_013335 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BGM07_013340 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BGM07_013345 PF04347 Flagellar biosynthesis protein, FliO BGM07_013350 PF00813 FliP family BGM07_013355 PF01313 Bacterial export proteins, family 3 BGM07_013360 PF01311 Bacterial export proteins, family 1 BGM07_013365 PF01312 FlhB HrpN YscU SpaS Family BGM07_013370 PF00771 FHIPEP family BGM07_013375 PF00448 SRP54-type protein, GTPase domain BGM07_013380 PF10609 NUBPL iron-transfer P-loop NTPase BGM07_013385 PF04539 Sigma-70 region 3 BGM07_013385 PF04542 Sigma-70 region 2 BGM07_013385 PF04545 Sigma-70, region 4 BGM07_013390 PF00072 Response regulator receiver domain BGM07_013395 PF04344 Chemotaxis phosphatase, CheZ BGM07_013400 PF02895 Signal transducing histidine kinase, homodimeric domain BGM07_013400 PF01584 CheW-like domain BGM07_013400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_013400 PF01627 Hpt domain BGM07_013400 PF07194 P2 response regulator binding domain BGM07_013405 PF01339 CheB methylesterase BGM07_013405 PF00072 Response regulator receiver domain BGM07_013410 PF13614 AAA domain BGM07_013420 PF01584 CheW-like domain BGM07_013430 PF00005 ABC transporter BGM07_013435 PF03379 CcmB protein BGM07_013440 PF01578 Cytochrome C assembly protein BGM07_013445 PF04995 Heme exporter protein D (CcmD) BGM07_013450 PF03100 CcmE BGM07_013455 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BGM07_013455 PF01578 Cytochrome C assembly protein BGM07_013460 PF08534 Redoxin BGM07_013465 PF03918 Cytochrome C biogenesis protein BGM07_013475 PF04333 MlaA lipoprotein BGM07_013480 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BGM07_013485 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BGM07_013495 PF04542 Sigma-70 region 2 BGM07_013495 PF08281 Sigma-70, region 4 BGM07_013505 PF00108 Thiolase, N-terminal domain BGM07_013505 PF02803 Thiolase, C-terminal domain BGM07_013510 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BGM07_013510 PF00378 Enoyl-CoA hydratase/isomerase BGM07_013510 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BGM07_013520 PF16187 Middle or third domain of peptidase_M16 BGM07_013520 PF00675 Insulinase (Peptidase family M16) BGM07_013520 PF05193 Peptidase M16 inactive domain BGM07_013525 PF00300 Histidine phosphatase superfamily (branch 1) BGM07_013530 PF01713 Smr domain BGM07_013535 PF05175 Methyltransferase small domain BGM07_013540 PF01264 Chorismate synthase BGM07_013545 PF03458 UPF0126 domain BGM07_013555 PF04315 Elongation factor P hydroxylase BGM07_013560 PF08891 YfcL protein BGM07_013570 PF03358 NADPH-dependent FMN reductase BGM07_013575 PF05430 S-adenosyl-L-methionine-dependent methyltransferase BGM07_013575 PF01266 FAD dependent oxidoreductase BGM07_013580 PF00109 Beta-ketoacyl synthase, N-terminal domain BGM07_013580 PF02801 Beta-ketoacyl synthase, C-terminal domain BGM07_013590 PF11890 Domain of unknown function (DUF3410) BGM07_013590 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BGM07_013590 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BGM07_013595 PF02774 Semialdehyde dehydrogenase, dimerisation domain BGM07_013595 PF01118 Semialdehyde dehydrogenase, NAD binding domain BGM07_013605 PF01416 tRNA pseudouridine synthase BGM07_013610 PF01039 Carboxyl transferase domain BGM07_013610 PF17848 Acetyl-coA carboxylase zinc finger domain BGM07_013615 PF08245 Mur ligase middle domain BGM07_013615 PF02875 Mur ligase family, glutamate ligase domain BGM07_013620 PF05036 Sporulation related domain BGM07_013625 PF02674 Colicin V production protein BGM07_013630 PF00156 Phosphoribosyl transferase domain BGM07_013635 PF03466 LysR substrate binding domain BGM07_013635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_013640 PF00072 Response regulator receiver domain BGM07_013650 PF04304 Protein of unknown function (DUF454) BGM07_013655 PF00156 Phosphoribosyl transferase domain BGM07_013660 PF12170 DNA polymerase III tau subunit V interacting with alpha BGM07_013660 PF12169 DNA polymerase III subunits gamma and tau domain III BGM07_013660 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding BGM07_013665 PF02575 YbaB/EbfC DNA-binding family BGM07_013670 PF02132 RecR protein BGM07_013670 PF13662 Toprim domain BGM07_013675 PF00230 Major intrinsic protein BGM07_013685 PF01042 Endoribonuclease L-PSP BGM07_013690 PF03313 Serine dehydratase alpha chain BGM07_013700 PF03692 Putative zinc- or iron-chelating domain BGM07_013705 PF04226 Transglycosylase associated protein BGM07_013710 PF03692 Putative zinc- or iron-chelating domain BGM07_013715 PF00924 Mechanosensitive ion channel BGM07_013715 PF05552 Conserved TM helix BGM07_013725 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BGM07_013735 PF00245 Alkaline phosphatase BGM07_013755 PF13847 Methyltransferase domain BGM07_013760 PF02743 Cache domain BGM07_013760 PF00672 HAMP domain BGM07_013760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGM07_013765 PF01263 Aldose 1-epimerase BGM07_013770 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BGM07_013770 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BGM07_013775 PF01641 SelR domain BGM07_013785 PF07023 Protein of unknown function (DUF1315) BGM07_013790 PF00710 Asparaginase, N-terminal BGM07_013790 PF17763 Glutaminase/Asparaginase C-terminal domain BGM07_013795 PF01343 Peptidase family S49 BGM07_013800 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BGM07_013800 PF07992 Pyridine nucleotide-disulphide oxidoreductase BGM07_013805 PF00881 Nitroreductase family BGM07_013810 PF01751 Toprim domain BGM07_013810 PF01131 DNA topoisomerase BGM07_013825 PF00106 short chain dehydrogenase BGM07_013830 PF00850 Histone deacetylase domain BGM07_013840 PF11893 Domain of unknown function (DUF3413) BGM07_013840 PF00884 Sulfatase BGM07_013845 PF07208 Protein of unknown function (DUF1414) BGM07_013850 PF04245 37-kD nucleoid-associated bacterial protein BGM07_013865 PF03553 Na+/H+ antiporter family BGM07_013870 PF02774 Semialdehyde dehydrogenase, dimerisation domain BGM07_013870 PF01118 Semialdehyde dehydrogenase, NAD binding domain BGM07_013875 PF00520 Ion transport protein BGM07_013875 PF00027 Cyclic nucleotide-binding domain BGM07_013880 PF01914 MarC family integral membrane protein BGM07_013885 PF00171 Aldehyde dehydrogenase family BGM07_013885 PF00465 Iron-containing alcohol dehydrogenase BGM07_013900 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BGM07_013900 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BGM07_013905 PF00462 Glutaredoxin BGM07_013915 PF13726 Na+-H+ antiporter family BGM07_013915 PF03553 Na+/H+ antiporter family BGM07_013920 PF00929 Exonuclease BGM07_013925 PF18393 MotY N-terminal domain BGM07_013925 PF00691 OmpA family BGM07_013930 PF10952 Protein of unknown function (DUF2753) BGM07_013935 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BGM07_013940 PF10576 Iron-sulfur binding domain of endonuclease III BGM07_013940 PF00730 HhH-GPD superfamily base excision DNA repair protein BGM07_013940 PF00633 Helix-hairpin-helix motif BGM07_013945 PF02508 Rnf-Nqr subunit, membrane protein BGM07_013950 PF04205 FMN-binding domain BGM07_013955 PF03116 NQR2, RnfD, RnfE family BGM07_013960 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BGM07_013960 PF12838 4Fe-4S dicluster domain BGM07_013960 PF13375 RnfC Barrel sandwich hybrid domain BGM07_013960 PF10531 SLBB domain BGM07_013965 PF04060 Putative Fe-S cluster BGM07_013970 PF02508 Rnf-Nqr subunit, membrane protein BGM07_013985 PF00271 Helicase conserved C-terminal domain BGM07_013985 PF17757 UvrB interaction domain BGM07_013985 PF12344 Ultra-violet resistance protein B BGM07_013985 PF02151 UvrB/uvrC motif BGM07_013985 PF04851 Type III restriction enzyme, res subunit BGM07_013990 PF00072 Response regulator receiver domain BGM07_013990 PF02954 Bacterial regulatory protein, Fis family BGM07_013990 PF00158 Sigma-54 interaction domain BGM07_013995 PF01627 Hpt domain BGM07_014000 PF01933 Uncharacterised protein family UPF0052 BGM07_014005 PF06463 Molybdenum Cofactor Synthesis C BGM07_014005 PF04055 Radical SAM superfamily BGM07_014010 PF00994 Probable molybdopterin binding domain BGM07_014015 PF01967 MoaC family BGM07_014020 PF02597 ThiS family BGM07_014025 PF02391 MoaE protein BGM07_014030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BGM07_014035 PF00528 Binding-protein-dependent transport system inner membrane component BGM07_014040 PF12911 N-terminal TM domain of oligopeptide transport permease C BGM07_014040 PF00528 Binding-protein-dependent transport system inner membrane component BGM07_014045 PF00005 ABC transporter BGM07_014045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BGM07_014050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BGM07_014050 PF00005 ABC transporter BGM07_014055 PF13409 Glutathione S-transferase, N-terminal domain BGM07_014065 PF13194 Domain of unknown function (DUF4010) BGM07_014070 PF01515 Phosphate acetyl/butaryl transferase BGM07_014070 PF07085 DRTGG domain BGM07_014075 PF00871 Acetokinase family BGM07_014080 PF04217 Protein of unknown function, DUF412 BGM07_014090 PF02653 Branched-chain amino acid transport system / permease component BGM07_014095 PF00005 ABC transporter BGM07_014100 PF02903 Alpha amylase, N-terminal ig-like domain BGM07_014100 PF00128 Alpha amylase, catalytic domain BGM07_014105 PF00990 Diguanylate cyclase, GGDEF domain BGM07_014105 PF00072 Response regulator receiver domain BGM07_014110 PF01207 Dihydrouridine synthase (Dus) BGM07_014115 PF02810 SEC-C motif BGM07_014115 PF07517 SecA DEAD-like domain BGM07_014115 PF01043 SecA preprotein cross-linking domain BGM07_014115 PF07516 SecA Wing and Scaffold domain BGM07_014120 PF02600 Disulfide bond formation protein DsbB BGM07_014125 PF06450 Bacterial Na+/H+ antiporter B (NhaB) BGM07_014130 PF00392 Bacterial regulatory proteins, gntR family BGM07_014130 PF07840 FadR C-terminal domain BGM07_014140 PF09334 tRNA synthetases class I (M) BGM07_014140 PF01588 Putative tRNA binding domain BGM07_014145 PF10609 NUBPL iron-transfer P-loop NTPase BGM07_014150 PF00485 Phosphoribulokinase / Uridine kinase family BGM07_014160 PF12557 Cob(I)alamin adenosyltransferase N terminal BGM07_014160 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP BGM07_014165 PF01451 Low molecular weight phosphotyrosine protein phosphatase BGM07_014170 PF00916 Sulfate permease family BGM07_014170 PF01740 STAS domain BGM07_014180 PF10150 Ribonuclease E/G family BGM07_014180 PF00575 S1 RNA binding domain BGM07_014180 PF12111 Polyribonucleotide phosphorylase C terminal BGM07_014190 PF01479 S4 domain BGM07_014190 PF00849 RNA pseudouridylate synthase BGM07_014195 PF02545 Maf-like protein BGM07_014200 PF02620 Large ribosomal RNA subunit accumulation protein YceD BGM07_014205 PF01783 Ribosomal L32p protein family BGM07_014210 PF02504 Fatty acid synthesis protein BGM07_014215 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BGM07_014215 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BGM07_014220 PF00698 Acyl transferase domain BGM07_014230 PF00550 Phosphopantetheine attachment site BGM07_014235 PF00109 Beta-ketoacyl synthase, N-terminal domain BGM07_014235 PF02801 Beta-ketoacyl synthase, C-terminal domain BGM07_014240 PF01063 Amino-transferase class IV BGM07_014245 PF02618 YceG-like family BGM07_014250 PF02223 Thymidylate kinase BGM07_014255 PF09115 DNA polymerase III, delta subunit, C terminal BGM07_014260 PF01026 TatD related DNase BGM07_014265 PF02378 Phosphotransferase system, EIIC BGM07_014265 PF00367 phosphotransferase system, EIIB BGM07_014285 PF00209 Sodium:neurotransmitter symporter family BGM07_014300 PF01734 Patatin-like phospholipase BGM07_014305 PF00224 Pyruvate kinase, barrel domain BGM07_014305 PF02887 Pyruvate kinase, alpha/beta domain BGM07_014310 PF00480 ROK family BGM07_014315 PF00072 Response regulator receiver domain BGM07_014315 PF01584 CheW-like domain BGM07_014320 PF07733 Bacterial DNA polymerase III alpha NTPase domain BGM07_014320 PF14579 Helix-hairpin-helix motif BGM07_014320 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BGM07_014320 PF01336 OB-fold nucleic acid binding domain BGM07_014320 PF02811 PHP domain BGM07_014335 PF00106 short chain dehydrogenase BGM07_014340 PF08496 Peptidase family S49 N-terminal BGM07_014340 PF01343 Peptidase family S49 BGM07_014345 PF02224 Cytidylate kinase BGM07_014350 PF00575 S1 RNA binding domain BGM07_014355 PF00216 Bacterial DNA-binding protein BGM07_014360 PF06305 Lipopolysaccharide assembly protein A domain BGM07_014365 PF18073 Rubredoxin metal binding domain BGM07_014370 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BGM07_014375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BGM07_014385 PF01370 NAD dependent epimerase/dehydratase family BGM07_014390 PF00535 Glycosyl transferase family 2 BGM07_014400 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase BGM07_014410 PF02470 MlaD protein BGM07_014415 PF04403 Paraquat-inducible protein A BGM07_014420 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BGM07_014425 PF00034 Cytochrome c BGM07_014430 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BGM07_014430 PF00384 Molybdopterin oxidoreductase BGM07_014430 PF01568 Molydopterin dinucleotide binding domain BGM07_014435 PF03916 Polysulphide reductase, NrfD BGM07_014440 PF13247 4Fe-4S dicluster domain BGM07_014445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_014445 PF00512 His Kinase A (phospho-acceptor) domain BGM07_014450 PF00196 Bacterial regulatory proteins, luxR family BGM07_014450 PF00072 Response regulator receiver domain BGM07_014455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_014455 PF03466 LysR substrate binding domain BGM07_014465 PF02683 Cytochrome C biogenesis protein transmembrane region BGM07_014465 PF11412 Disulphide bond corrector protein DsbC BGM07_014470 PF00085 Thioredoxin BGM07_014485 PF05958 tRNA (Uracil-5-)-methyltransferase BGM07_014485 PF01938 TRAM domain BGM07_014500 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BGM07_014510 PF02687 FtsX-like permease family BGM07_014510 PF00005 ABC transporter BGM07_014510 PF12704 MacB-like periplasmic core domain BGM07_014515 PF00005 ABC transporter BGM07_014515 PF02687 FtsX-like permease family BGM07_014515 PF12704 MacB-like periplasmic core domain BGM07_014520 PF12704 MacB-like periplasmic core domain BGM07_014520 PF02687 FtsX-like permease family BGM07_014520 PF00005 ABC transporter BGM07_014525 PF00857 Isochorismatase family BGM07_014530 PF12833 Helix-turn-helix domain BGM07_014530 PF02311 AraC-like ligand binding domain BGM07_014540 PF01717 Cobalamin-independent synthase, Catalytic domain BGM07_014540 PF08267 Cobalamin-independent synthase, N-terminal domain BGM07_014550 PF00529 HlyD membrane-fusion protein of T1SS BGM07_014550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BGM07_014555 PF03466 LysR substrate binding domain BGM07_014555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_014575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_014575 PF00512 His Kinase A (phospho-acceptor) domain BGM07_014575 PF00672 HAMP domain BGM07_014580 PF00072 Response regulator receiver domain BGM07_014580 PF00486 Transcriptional regulatory protein, C terminal BGM07_014585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGM07_014585 PF00672 HAMP domain BGM07_014590 PF11842 Domain of unknown function (DUF3362) BGM07_014590 PF04055 Radical SAM superfamily BGM07_014590 PF08497 Radical SAM N-terminal BGM07_014595 PF00990 Diguanylate cyclase, GGDEF domain BGM07_014595 PF00563 EAL domain BGM07_014595 PF01590 GAF domain BGM07_014595 PF00360 Phytochrome region BGM07_014615 PF03466 LysR substrate binding domain BGM07_014615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_014625 PF01717 Cobalamin-independent synthase, Catalytic domain BGM07_014625 PF08267 Cobalamin-independent synthase, N-terminal domain BGM07_014635 PF03795 YCII-related domain BGM07_014640 PF03061 Thioesterase superfamily BGM07_014645 PF04279 Intracellular septation protein A BGM07_014655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_014655 PF00072 Response regulator receiver domain BGM07_014660 PF17327 Acyl homoserine lactone synthase BGM07_014665 PF00375 Sodium:dicarboxylate symporter family BGM07_014670 PF13193 AMP-binding enzyme C-terminal domain BGM07_014670 PF00501 AMP-binding enzyme BGM07_014675 PF00027 Cyclic nucleotide-binding domain BGM07_014675 PF13545 Crp-like helix-turn-helix domain BGM07_014680 PF00290 Tryptophan synthase alpha chain BGM07_014685 PF00291 Pyridoxal-phosphate dependent enzyme BGM07_014690 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BGM07_014690 PF00218 Indole-3-glycerol phosphate synthase BGM07_014695 PF00591 Glycosyl transferase family, a/b domain BGM07_014695 PF02885 Glycosyl transferase family, helical bundle domain BGM07_014700 PF00117 Glutamine amidotransferase class-I BGM07_014705 PF04715 Anthranilate synthase component I, N terminal region BGM07_014705 PF00425 chorismate binding enzyme BGM07_014710 PF08056 Tryptophan operon leader peptide BGM07_014715 PF02811 PHP domain BGM07_014720 PF01300 Telomere recombination BGM07_014730 PF01479 S4 domain BGM07_014730 PF00849 RNA pseudouridylate synthase BGM07_014735 PF04269 Protein of unknown function, DUF440 BGM07_014740 PF08207 Elongation factor P (EF-P) KOW-like domain BGM07_014740 PF09285 Elongation factor P, C-terminal BGM07_014740 PF01132 Elongation factor P (EF-P) OB domain BGM07_014750 PF03104 DNA polymerase family B, exonuclease domain BGM07_014750 PF00136 DNA polymerase family B BGM07_014755 PF00196 Bacterial regulatory proteins, luxR family BGM07_014755 PF00072 Response regulator receiver domain BGM07_014760 PF01541 GIY-YIG catalytic domain BGM07_014760 PF08459 UvrC Helix-hairpin-helix N-terminal BGM07_014760 PF02151 UvrB/uvrC motif BGM07_014765 PF01066 CDP-alcohol phosphatidyltransferase BGM07_014795 PF00202 Aminotransferase class-III BGM07_014800 PF03435 Saccharopine dehydrogenase NADP binding domain BGM07_014800 PF16653 Saccharopine dehydrogenase C-terminal domain BGM07_014805 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BGM07_014820 PF00994 Probable molybdopterin binding domain BGM07_014830 PF00268 Ribonucleotide reductase, small chain BGM07_014835 PF03477 ATP cone domain BGM07_014835 PF00317 Ribonucleotide reductase, all-alpha domain BGM07_014835 PF02867 Ribonucleotide reductase, barrel domain BGM07_014850 PF00521 DNA gyrase/topoisomerase IV, subunit A BGM07_014850 PF03989 DNA gyrase C-terminal domain, beta-propeller BGM07_014865 PF02335 Cytochrome c552 BGM07_014875 PF13247 4Fe-4S dicluster domain BGM07_014880 PF03916 Polysulphide reductase, NrfD BGM07_014885 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BGM07_014885 PF01578 Cytochrome C assembly protein BGM07_014890 PF08534 Redoxin BGM07_014895 PF03918 Cytochrome C biogenesis protein BGM07_014905 PF00925 GTP cyclohydrolase II BGM07_014930 PF03734 L,D-transpeptidase catalytic domain BGM07_014930 PF01471 Putative peptidoglycan binding domain BGM07_014935 PF05951 Bacterial protein of unknown function (DUF882) BGM07_014940 PF00753 Metallo-beta-lactamase superfamily BGM07_014955 PF03480 Bacterial extracellular solute-binding protein, family 7 BGM07_014965 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BGM07_014970 PF07730 Histidine kinase BGM07_014970 PF17200 Single Cache domain 2 BGM07_014975 PF00072 Response regulator receiver domain BGM07_014975 PF00196 Bacterial regulatory proteins, luxR family BGM07_014980 PF01047 MarR family BGM07_014985 PF02028 BCCT, betaine/carnitine/choline family transporter BGM07_014990 PF00672 HAMP domain BGM07_014990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGM07_015010 PF00155 Aminotransferase class I and II BGM07_015025 PF00155 Aminotransferase class I and II BGM07_015025 PF00392 Bacterial regulatory proteins, gntR family BGM07_015035 PF00152 tRNA synthetases class II (D, K and N) BGM07_015035 PF01336 OB-fold nucleic acid binding domain BGM07_015040 PF00672 HAMP domain BGM07_015040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGM07_015040 PF12729 Four helix bundle sensory module for signal transduction BGM07_015045 PF01242 6-pyruvoyl tetrahydropterin synthase BGM07_015055 PF04940 Sensors of blue-light using FAD BGM07_015055 PF00563 EAL domain BGM07_015060 PF03313 Serine dehydratase alpha chain BGM07_015060 PF03315 Serine dehydratase beta chain BGM07_015065 PF03222 Tryptophan/tyrosine permease family BGM07_015070 PF00293 NUDIX domain BGM07_015080 PF00072 Response regulator receiver domain BGM07_015080 PF09308 LuxQ, periplasmic BGM07_015080 PF00512 His Kinase A (phospho-acceptor) domain BGM07_015080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_015085 PF04715 Anthranilate synthase component I, N terminal region BGM07_015085 PF00425 chorismate binding enzyme BGM07_015100 PF04317 YcjX-like family, DUF463 BGM07_015105 PF05128 Domain of unknown function (DUF697) BGM07_015110 PF18024 Helix-turn-helix domain BGM07_015110 PF00158 Sigma-54 interaction domain BGM07_015115 PF13302 Acetyltransferase (GNAT) domain BGM07_015130 PF00589 Phage integrase family BGM07_015130 PF13495 Phage integrase, N-terminal SAM-like domain BGM07_015190 PF08378 Nuclease-related domain BGM07_015225 PF01042 Endoribonuclease L-PSP BGM07_015240 PF01810 LysE type translocator BGM07_015340 PF00857 Isochorismatase family BGM07_015415 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BGM07_015550 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BGM07_015605 PF04229 GrpB protein BGM07_015640 PF00583 Acetyltransferase (GNAT) family BGM07_015685 PF02224 Cytidylate kinase BGM07_015685 PF02569 Pantoate-beta-alanine ligase BGM07_015895 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BGM07_015925 PF13673 Acetyltransferase (GNAT) domain BGM07_015925 PF04229 GrpB protein BGM07_015935 PF02810 SEC-C motif BGM07_015935 PF07517 SecA DEAD-like domain BGM07_015935 PF01043 SecA preprotein cross-linking domain BGM07_015935 PF07516 SecA Wing and Scaffold domain BGM07_016110 PF14032 PknH-like extracellular domain BGM07_016110 PF00069 Protein kinase domain BGM07_016275 PF06271 RDD family BGM07_016310 PF00589 Phage integrase family BGM07_016340 PF07411 Domain of unknown function (DUF1508) BGM07_016355 PF12833 Helix-turn-helix domain BGM07_016355 PF02311 AraC-like ligand binding domain BGM07_016395 PF13533 Biotin-lipoyl like BGM07_016410 PF08543 Phosphomethylpyrimidine kinase BGM07_016415 PF03466 LysR substrate binding domain BGM07_016415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_016435 PF00300 Histidine phosphatase superfamily (branch 1) BGM07_016445 PF00583 Acetyltransferase (GNAT) family BGM07_016450 PF00939 Sodium:sulfate symporter transmembrane region BGM07_016455 PF00512 His Kinase A (phospho-acceptor) domain BGM07_016455 PF00497 Bacterial extracellular solute-binding proteins, family 3 BGM07_016455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_016460 PF00158 Sigma-54 interaction domain BGM07_016460 PF00072 Response regulator receiver domain BGM07_016460 PF02954 Bacterial regulatory protein, Fis family BGM07_016465 PF03707 Bacterial signalling protein N terminal repeat BGM07_016465 PF00563 EAL domain BGM07_016465 PF00990 Diguanylate cyclase, GGDEF domain BGM07_016470 PF11871 Domain of unknown function (DUF3391) BGM07_016470 PF01966 HD domain BGM07_016475 PF01810 LysE type translocator BGM07_016480 PF11230 Protein of unknown function (DUF3029) BGM07_016485 PF04055 Radical SAM superfamily BGM07_016495 PF03741 Integral membrane protein TerC family BGM07_016505 PF00884 Sulfatase BGM07_016510 PF00512 His Kinase A (phospho-acceptor) domain BGM07_016510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_016510 PF08521 Two-component sensor kinase N-terminal BGM07_016515 PF00486 Transcriptional regulatory protein, C terminal BGM07_016515 PF00072 Response regulator receiver domain BGM07_016535 PF00501 AMP-binding enzyme BGM07_016545 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BGM07_016550 PF00528 Binding-protein-dependent transport system inner membrane component BGM07_016555 PF00005 ABC transporter BGM07_016555 PF00571 CBS domain BGM07_016570 PF02028 BCCT, betaine/carnitine/choline family transporter BGM07_016575 PF00583 Acetyltransferase (GNAT) family BGM07_016580 PF00202 Aminotransferase class-III BGM07_016585 PF06339 Ectoine synthase BGM07_016590 PF13840 ACT domain BGM07_016590 PF00696 Amino acid kinase family BGM07_016595 PF00034 Cytochrome c BGM07_016595 PF03150 Di-haem cytochrome c peroxidase BGM07_016610 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BGM07_016625 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BGM07_016625 PF17203 Single cache domain 3 BGM07_016625 PF00989 PAS fold BGM07_016625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_016630 PF00072 Response regulator receiver domain BGM07_016630 PF12431 Transcriptional regulator BGM07_016635 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BGM07_016635 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BGM07_016640 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BGM07_016645 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BGM07_016645 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BGM07_016670 PF00158 Sigma-54 interaction domain BGM07_016670 PF02954 Bacterial regulatory protein, Fis family BGM07_016670 PF01590 GAF domain BGM07_016675 PF00171 Aldehyde dehydrogenase family BGM07_016695 PF12833 Helix-turn-helix domain BGM07_016715 PF16693 Inner membrane component of T3SS, periplasmic domain BGM07_016715 PF16697 Inner membrane component of T3SS, cytoplasmic domain BGM07_016725 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF BGM07_016730 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) BGM07_016740 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI BGM07_016745 PF01514 Secretory protein of YscJ/FliF family BGM07_016755 PF02108 Flagellar assembly protein FliH BGM07_016765 PF02661 Fic/DOC family BGM07_016795 PF12146 Serine aminopeptidase, S33 BGM07_016800 PF12146 Serine aminopeptidase, S33 BGM07_016805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_016805 PF03466 LysR substrate binding domain BGM07_016810 PF01312 FlhB HrpN YscU SpaS Family BGM07_016815 PF01311 Bacterial export proteins, family 1 BGM07_016820 PF01313 Bacterial export proteins, family 3 BGM07_016825 PF00813 FliP family BGM07_016830 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BGM07_016845 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BGM07_016845 PF02874 ATP synthase alpha/beta family, beta-barrel domain BGM07_016845 PF18269 T3SS EscN ATPase C-terminal domain BGM07_016850 PF07201 HrpJ-like domain BGM07_016855 PF09059 TyeA BGM07_016875 PF00771 FHIPEP family BGM07_016880 PF09621 Type III secretion system regulator (LcrR) BGM07_016885 PF07216 LcrG protein BGM07_016890 PF04792 V antigen (LcrV) protein BGM07_016895 PF07720 Tetratricopeptide repeat BGM07_016905 PF05844 YopD protein BGM07_016915 PF01925 Sulfite exporter TauE/SafE BGM07_016920 PF01970 Tripartite tricarboxylate transporter TctA family BGM07_016950 PF00285 Citrate synthase, C-terminal domain BGM07_016955 PF00694 Aconitase C-terminal domain BGM07_016955 PF00330 Aconitase family (aconitate hydratase) BGM07_016960 PF04303 PrpF protein BGM07_016965 PF00501 AMP-binding enzyme BGM07_016965 PF16177 Acetyl-coenzyme A synthetase N-terminus BGM07_016965 PF13193 AMP-binding enzyme C-terminal domain BGM07_016970 PF00583 Acetyltransferase (GNAT) family BGM07_016975 PF00089 Trypsin BGM07_016990 PF04055 Radical SAM superfamily BGM07_016995 PF06508 Queuosine biosynthesis protein QueC BGM07_017000 PF00990 Diguanylate cyclase, GGDEF domain BGM07_017010 PF05736 OprF membrane domain BGM07_017010 PF00691 OmpA family BGM07_017025 PF00691 OmpA family BGM07_017025 PF05736 OprF membrane domain BGM07_017040 PF17785 PUA-like domain BGM07_017040 PF10672 S-adenosylmethionine-dependent methyltransferase BGM07_017045 PF02743 Cache domain BGM07_017045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGM07_017045 PF00672 HAMP domain BGM07_017050 PF00708 Acylphosphatase BGM07_017055 PF04358 DsrC like protein BGM07_017065 PF01027 Inhibitor of apoptosis-promoting Bax1 BGM07_017070 PF00005 ABC transporter BGM07_017075 PF00528 Binding-protein-dependent transport system inner membrane component BGM07_017080 PF00528 Binding-protein-dependent transport system inner membrane component BGM07_017085 PF00497 Bacterial extracellular solute-binding proteins, family 3 BGM07_017090 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BGM07_017090 PF10414 Sirohaem synthase dimerisation region BGM07_017090 PF14824 Sirohaem biosynthesis protein central BGM07_017100 PF04461 Protein of unknown function (DUF520) BGM07_017105 PF00793 DAHP synthetase I family BGM07_017125 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF BGM07_017125 PF01189 16S rRNA methyltransferase RsmB/F BGM07_017125 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF BGM07_017135 PF02470 MlaD protein BGM07_017140 PF04403 Paraquat-inducible protein A BGM07_017145 PF00664 ABC transporter transmembrane region BGM07_017145 PF00005 ABC transporter BGM07_017150 PF13185 GAF domain BGM07_017155 PF17516 ProQ C-terminal domain BGM07_017155 PF04352 ProQ/FINO family BGM07_017160 PF00595 PDZ domain BGM07_017160 PF03572 Peptidase family S41 BGM07_017160 PF11818 C-terminal domain of tail specific protease (DUF3340) BGM07_017160 PF17804 Tail specific protease N-terminal domain BGM07_017170 PF17432 Domain of unknown function (DUF3458_C) ARM repeats BGM07_017170 PF11940 Domain of unknown function (DUF3458) Ig-like fold BGM07_017170 PF01433 Peptidase family M1 domain BGM07_017180 PF05088 Bacterial NAD-glutamate dehydrogenase BGM07_017185 PF01180 Dihydroorotate dehydrogenase BGM07_017190 PF07126 Cell-division protein ZapC BGM07_017195 PF02926 THUMP domain BGM07_017195 PF01170 Putative RNA methylase family UPF0020 BGM07_017195 PF10672 S-adenosylmethionine-dependent methyltransferase BGM07_017215 PF04957 Ribosome modulation factor BGM07_017220 PF07977 FabA-like domain BGM07_017225 PF13654 AAA domain BGM07_017225 PF05362 Lon protease (S16) C-terminal proteolytic domain BGM07_017230 PF17414 MatP C-terminal ribbon-helix-helix domain BGM07_017230 PF06303 MatP N-terminal domain BGM07_017415 PF09308 LuxQ, periplasmic BGM07_017415 PF00512 His Kinase A (phospho-acceptor) domain BGM07_017415 PF00072 Response regulator receiver domain BGM07_017415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_017430 PF00115 Cytochrome C and Quinol oxidase polypeptide I BGM07_017445 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BGM07_017445 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP BGM07_017455 PF00403 Heavy-metal-associated domain BGM07_017470 PF13545 Crp-like helix-turn-helix domain BGM07_017470 PF00027 Cyclic nucleotide-binding domain BGM07_017475 PF00582 Universal stress protein family BGM07_017480 PF01171 PP-loop family BGM07_017500 PF00005 ABC transporter BGM07_017500 PF08402 TOBE domain BGM07_017505 PF00528 Binding-protein-dependent transport system inner membrane component BGM07_017510 PF00528 Binding-protein-dependent transport system inner membrane component BGM07_017515 PF13416 Bacterial extracellular solute-binding protein BGM07_017520 PF13416 Bacterial extracellular solute-binding protein BGM07_017525 PF02146 Sir2 family BGM07_017535 PF00909 Ammonium Transporter Family BGM07_017560 PF13247 4Fe-4S dicluster domain BGM07_017565 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BGM07_017565 PF00384 Molybdopterin oxidoreductase BGM07_017565 PF01568 Molydopterin dinucleotide binding domain BGM07_017575 PF02613 Nitrate reductase delta subunit BGM07_017595 PF02634 FdhD/NarQ family BGM07_017600 PF12848 ABC transporter BGM07_017600 PF00005 ABC transporter BGM07_017605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_017605 PF00512 His Kinase A (phospho-acceptor) domain BGM07_017610 PF00072 Response regulator receiver domain BGM07_017610 PF02954 Bacterial regulatory protein, Fis family BGM07_017610 PF00158 Sigma-54 interaction domain BGM07_017615 PF12849 PBP superfamily domain BGM07_017620 PF00528 Binding-protein-dependent transport system inner membrane component BGM07_017625 PF08402 TOBE domain BGM07_017625 PF00005 ABC transporter BGM07_017630 PF12804 MobA-like NTP transferase domain BGM07_017635 PF03454 MoeA C-terminal region (domain IV) BGM07_017635 PF00994 Probable molybdopterin binding domain BGM07_017635 PF03453 MoeA N-terminal region (domain I and II) BGM07_017645 PF00480 ROK family BGM07_017690 PF00877 NlpC/P60 family BGM07_017700 PF00990 Diguanylate cyclase, GGDEF domain BGM07_017700 PF05230 MASE2 domain BGM07_017705 PF01339 CheB methylesterase BGM07_017705 PF00072 Response regulator receiver domain BGM07_017720 PF00677 Lumazine binding domain BGM07_017725 PF01554 MatE BGM07_017735 PF14743 DNA ligase OB-like domain BGM07_017735 PF01068 ATP dependent DNA ligase domain BGM07_017740 PF01740 STAS domain BGM07_017750 PF02563 Polysaccharide biosynthesis/export protein BGM07_017750 PF10531 SLBB domain BGM07_017765 PF00158 Sigma-54 interaction domain BGM07_017765 PF00072 Response regulator receiver domain BGM07_017765 PF02954 Bacterial regulatory protein, Fis family BGM07_017775 PF13439 Glycosyltransferase Family 4 BGM07_017775 PF00534 Glycosyl transferases group 1 BGM07_017805 PF00534 Glycosyl transferases group 1 BGM07_017805 PF13439 Glycosyltransferase Family 4 BGM07_017810 PF00535 Glycosyl transferase family 2 BGM07_017815 PF02397 Bacterial sugar transferase BGM07_017825 PF02028 BCCT, betaine/carnitine/choline family transporter BGM07_017840 PF04408 Helicase associated domain (HA2) BGM07_017840 PF11898 Domain of unknown function (DUF3418) BGM07_017840 PF00270 DEAD/DEAH box helicase BGM07_017840 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BGM07_017840 PF00271 Helicase conserved C-terminal domain BGM07_017845 PF02525 Flavodoxin-like fold BGM07_017855 PF02613 Nitrate reductase delta subunit BGM07_017860 PF04976 DMSO reductase anchor subunit (DmsC) BGM07_017865 PF12800 4Fe-4S binding domain BGM07_017865 PF13247 4Fe-4S dicluster domain BGM07_017870 PF01568 Molydopterin dinucleotide binding domain BGM07_017870 PF00384 Molybdopterin oxidoreductase BGM07_017870 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BGM07_017900 PF00990 Diguanylate cyclase, GGDEF domain BGM07_017900 PF17158 Membrane-associated sensor, integral membrane domain BGM07_017910 PF00012 Hsp70 protein BGM07_017915 PF00012 Hsp70 protein BGM07_017940 PF00005 ABC transporter BGM07_017940 PF00664 ABC transporter transmembrane region BGM07_017945 PF00664 ABC transporter transmembrane region BGM07_017945 PF00005 ABC transporter BGM07_017965 PF03222 Tryptophan/tyrosine permease family BGM07_017970 PF00465 Iron-containing alcohol dehydrogenase BGM07_017975 PF01966 HD domain BGM07_018005 PF01235 Sodium:alanine symporter family BGM07_018015 PF01810 LysE type translocator BGM07_018020 PF02074 Carboxypeptidase Taq (M32) metallopeptidase BGM07_018025 PF03279 Bacterial lipid A biosynthesis acyltransferase BGM07_018030 PF13520 Amino acid permease BGM07_018040 PF04204 Homoserine O-succinyltransferase BGM07_018055 PF00990 Diguanylate cyclase, GGDEF domain BGM07_018055 PF03707 Bacterial signalling protein N terminal repeat BGM07_018055 PF00563 EAL domain BGM07_018060 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BGM07_018060 PF00072 Response regulator receiver domain BGM07_018060 PF01627 Hpt domain BGM07_018060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_018060 PF00672 HAMP domain BGM07_018060 PF00512 His Kinase A (phospho-acceptor) domain BGM07_018075 PF12464 Maltose acetyltransferase BGM07_018075 PF00132 Bacterial transferase hexapeptide (six repeats) BGM07_018085 PF01928 CYTH domain BGM07_018095 PF04237 YjbR BGM07_018100 PF01047 MarR family BGM07_018110 PF12833 Helix-turn-helix domain BGM07_018115 PF01411 tRNA synthetases class II (A) BGM07_018115 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BGM07_018115 PF02272 DHHA1 domain BGM07_018130 PF00563 EAL domain BGM07_018130 PF00196 Bacterial regulatory proteins, luxR family BGM07_018135 PF02833 DHHA2 domain BGM07_018135 PF01368 DHH family BGM07_018140 PF00202 Aminotransferase class-III BGM07_018145 PF00171 Aldehyde dehydrogenase family BGM07_018150 PF04371 Porphyromonas-type peptidyl-arginine deiminase BGM07_018155 PF00795 Carbon-nitrogen hydrolase BGM07_018160 PF01266 FAD dependent oxidoreductase BGM07_018165 PF00171 Aldehyde dehydrogenase family BGM07_018170 PF07883 Cupin domain BGM07_018170 PF01381 Helix-turn-helix BGM07_018175 PF07722 Peptidase C26 BGM07_018185 PF00120 Glutamine synthetase, catalytic domain BGM07_018190 PF03553 Na+/H+ antiporter family BGM07_018215 PF01810 LysE type translocator BGM07_018290 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BGM07_018290 PF00529 HlyD membrane-fusion protein of T1SS BGM07_018430 PF17288 Terminase RNAseH like domain BGM07_018430 PF04466 Phage terminase large subunit BGM07_018440 PF02195 ParB-like nuclease domain BGM07_018450 PF07411 Domain of unknown function (DUF1508) BGM07_018480 PF08461 Ribonuclease R winged-helix domain BGM07_018480 PF17876 Cold shock domain BGM07_018480 PF00773 RNB domain BGM07_018480 PF00575 S1 RNA binding domain BGM07_018480 PF08206 Ribonuclease B OB domain BGM07_018485 PF00313 'Cold-shock' DNA-binding domain BGM07_018590 PF02798 Glutathione S-transferase, N-terminal domain BGM07_018590 PF14497 Glutathione S-transferase, C-terminal domain BGM07_018600 PF04209 homogentisate 1,2-dioxygenase BGM07_018605 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BGM07_018615 PF01546 Peptidase family M20/M25/M40 BGM07_018615 PF07687 Peptidase dimerisation domain BGM07_018635 PF01048 Phosphorylase superfamily BGM07_018640 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BGM07_018645 PF00528 Binding-protein-dependent transport system inner membrane component BGM07_018650 PF12911 N-terminal TM domain of oligopeptide transport permease C BGM07_018650 PF00528 Binding-protein-dependent transport system inner membrane component BGM07_018655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BGM07_018655 PF00005 ABC transporter BGM07_018660 PF00005 ABC transporter BGM07_018660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BGM07_018670 PF08453 Peptidase family M9 N-terminal BGM07_018670 PF01752 Collagenase BGM07_018685 PF00528 Binding-protein-dependent transport system inner membrane component BGM07_018690 PF00528 Binding-protein-dependent transport system inner membrane component BGM07_018695 PF00005 ABC transporter BGM07_018695 PF08402 TOBE domain BGM07_018700 PF00701 Dihydrodipicolinate synthetase family BGM07_018705 PF02423 Ornithine cyclodeaminase/mu-crystallin family BGM07_018720 PF05544 Proline racemase BGM07_018725 PF00171 Aldehyde dehydrogenase family BGM07_018730 PF00392 Bacterial regulatory proteins, gntR family BGM07_018750 PF05971 RNA methyltransferase BGM07_018755 PF01863 Protein of unknown function DUF45 BGM07_018765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_018765 PF03466 LysR substrate binding domain BGM07_018785 PF00005 ABC transporter BGM07_018790 PF01032 FecCD transport family BGM07_018795 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family BGM07_018810 PF00300 Histidine phosphatase superfamily (branch 1) BGM07_018815 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase BGM07_018820 PF02654 Cobalamin-5-phosphate synthase BGM07_018825 PF02277 Phosphoribosyltransferase BGM07_018830 PF13460 NAD(P)H-binding BGM07_018840 PF08411 Exonuclease C-terminal BGM07_018840 PF00929 Exonuclease BGM07_018845 PF03788 LrgA family BGM07_018850 PF04172 LrgB-like family BGM07_018855 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BGM07_018855 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region BGM07_018860 PF02222 ATP-grasp domain BGM07_018865 PF05724 Thiopurine S-methyltransferase (TPMT) BGM07_018875 PF00216 Bacterial DNA-binding protein BGM07_018885 PF01588 Putative tRNA binding domain BGM07_018885 PF03484 tRNA synthetase B5 domain BGM07_018885 PF03147 Ferredoxin-fold anticodon binding domain BGM07_018885 PF03483 B3/4 domain BGM07_018885 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BGM07_018890 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BGM07_018890 PF01409 tRNA synthetases class II core domain (F) BGM07_018895 PF00990 Diguanylate cyclase, GGDEF domain BGM07_018895 PF17158 Membrane-associated sensor, integral membrane domain BGM07_018925 PF01906 Putative heavy-metal-binding BGM07_018930 PF00453 Ribosomal protein L20 BGM07_018935 PF01632 Ribosomal protein L35 BGM07_018940 PF05198 Translation initiation factor IF-3, N-terminal domain BGM07_018940 PF00707 Translation initiation factor IF-3, C-terminal domain BGM07_018945 PF03129 Anticodon binding domain BGM07_018945 PF02824 TGS domain BGM07_018945 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BGM07_018945 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BGM07_018960 PF07702 UTRA domain BGM07_018960 PF00392 Bacterial regulatory proteins, gntR family BGM07_018965 PF01979 Amidohydrolase family BGM07_018970 PF00491 Arginase family BGM07_018975 PF17391 Urocanase N-terminal domain BGM07_018975 PF17392 Urocanase C-terminal domain BGM07_018975 PF01175 Urocanase Rossmann-like domain BGM07_018980 PF00221 Aromatic amino acid lyase BGM07_018990 PF04191 Phospholipid methyltransferase BGM07_018995 PF02913 FAD linked oxidases, C-terminal domain BGM07_018995 PF01565 FAD binding domain BGM07_018995 PF13183 4Fe-4S dicluster domain BGM07_019010 PF00691 OmpA family BGM07_019010 PF05736 OprF membrane domain BGM07_019030 PF01259 SAICAR synthetase BGM07_019035 PF16655 PhoD-like phosphatase, N-terminal domain BGM07_019035 PF09423 PhoD-like phosphatase BGM07_019045 PF02253 Phospholipase A1 BGM07_019050 PF04408 Helicase associated domain (HA2) BGM07_019050 PF08482 ATP-dependent helicase C-terminal BGM07_019050 PF00271 Helicase conserved C-terminal domain BGM07_019050 PF00270 DEAD/DEAH box helicase BGM07_019055 PF03949 Malic enzyme, NAD binding domain BGM07_019055 PF00390 Malic enzyme, N-terminal domain BGM07_019060 PF02698 DUF218 domain BGM07_019065 PF00939 Sodium:sulfate symporter transmembrane region BGM07_019070 PF00990 Diguanylate cyclase, GGDEF domain BGM07_019070 PF00072 Response regulator receiver domain BGM07_019080 PF00266 Aminotransferase class-V BGM07_019090 PF07992 Pyridine nucleotide-disulphide oxidoreductase BGM07_019095 PF00664 ABC transporter transmembrane region BGM07_019095 PF00005 ABC transporter BGM07_019100 PF00005 ABC transporter BGM07_019100 PF00664 ABC transporter transmembrane region BGM07_019105 PF00291 Pyridoxal-phosphate dependent enzyme BGM07_019110 PF00266 Aminotransferase class-V BGM07_019120 PF00497 Bacterial extracellular solute-binding proteins, family 3 BGM07_019120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_019120 PF00512 His Kinase A (phospho-acceptor) domain BGM07_019135 PF04993 TfoX N-terminal domain BGM07_019135 PF04994 TfoX C-terminal domain BGM07_019155 PF03956 Lysine exporter LysO BGM07_019165 PF00282 Pyridoxal-dependent decarboxylase conserved domain BGM07_019170 PF01380 SIS domain BGM07_019170 PF01418 Helix-turn-helix domain, rpiR family BGM07_019175 PF00465 Iron-containing alcohol dehydrogenase BGM07_019180 PF00462 Glutaredoxin BGM07_019185 PF02080 TrkA-C domain BGM07_019185 PF06826 Predicted Permease Membrane Region BGM07_019190 PF12241 Trans-2-enoyl-CoA reductase catalytic region BGM07_019190 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase BGM07_019190 PF07055 Enoyl reductase FAD binding domain BGM07_019195 PF09317 Domain of unknown function (DUF1974) BGM07_019195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BGM07_019195 PF02770 Acyl-CoA dehydrogenase, middle domain BGM07_019195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BGM07_019200 PF00440 Bacterial regulatory proteins, tetR family BGM07_019200 PF16295 Tetracyclin repressor-like, C-terminal domain BGM07_019205 PF06965 Na+/H+ antiporter 1 BGM07_019220 PF00005 ABC transporter BGM07_019225 PF01554 MatE BGM07_019230 PF11066 Protein of unknown function (DUF2867) BGM07_019230 PF13460 NAD(P)H-binding BGM07_019235 PF03264 NapC/NirT cytochrome c family, N-terminal region BGM07_019250 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) BGM07_019265 PF07690 Major Facilitator Superfamily BGM07_019270 PF00849 RNA pseudouridylate synthase BGM07_019270 PF01479 S4 domain BGM07_019275 PF00271 Helicase conserved C-terminal domain BGM07_019275 PF04851 Type III restriction enzyme, res subunit BGM07_019285 PF00486 Transcriptional regulatory protein, C terminal BGM07_019285 PF00072 Response regulator receiver domain BGM07_019290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_019290 PF00512 His Kinase A (phospho-acceptor) domain BGM07_019290 PF00672 HAMP domain BGM07_019295 PF01386 Ribosomal L25p family BGM07_019310 PF02872 5'-nucleotidase, C-terminal domain BGM07_019310 PF00149 Calcineurin-like phosphoesterase BGM07_019320 PF06945 Protein of unknown function (DUF1289) BGM07_019330 PF00196 Bacterial regulatory proteins, luxR family BGM07_019330 PF00072 Response regulator receiver domain BGM07_019335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_019335 PF00512 His Kinase A (phospho-acceptor) domain BGM07_019345 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BGM07_019345 PF07992 Pyridine nucleotide-disulphide oxidoreductase BGM07_019355 PF09335 SNARE associated Golgi protein BGM07_019360 PF13416 Bacterial extracellular solute-binding protein BGM07_019365 PF00528 Binding-protein-dependent transport system inner membrane component BGM07_019370 PF00005 ABC transporter BGM07_019375 PF01066 CDP-alcohol phosphatidyltransferase BGM07_019385 PF01590 GAF domain BGM07_019385 PF00158 Sigma-54 interaction domain BGM07_019390 PF03063 Prismane/CO dehydrogenase family BGM07_019395 PF00970 Oxidoreductase FAD-binding domain BGM07_019395 PF00111 2Fe-2S iron-sulfur cluster binding domain BGM07_019395 PF00175 Oxidoreductase NAD-binding domain BGM07_019405 PF00849 RNA pseudouridylate synthase BGM07_019410 PF00672 HAMP domain BGM07_019410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGM07_019410 PF12729 Four helix bundle sensory module for signal transduction BGM07_019415 PF00209 Sodium:neurotransmitter symporter family BGM07_019420 PF13396 Phospholipase_D-nuclease N-terminal BGM07_019420 PF13091 PLD-like domain BGM07_019425 PF01053 Cys/Met metabolism PLP-dependent enzyme BGM07_019430 PF00561 alpha/beta hydrolase fold BGM07_019435 PF03280 Proteobacterial lipase chaperone protein BGM07_019440 PF03352 Methyladenine glycosylase BGM07_019445 PF00873 AcrB/AcrD/AcrF family BGM07_019450 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BGM07_019455 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BGM07_019460 PF04024 PspC domain BGM07_019465 PF06667 Phage shock protein B BGM07_019470 PF04012 PspA/IM30 family BGM07_019475 PF00158 Sigma-54 interaction domain BGM07_019475 PF02954 Bacterial regulatory protein, Fis family BGM07_019480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BGM07_019485 PF00528 Binding-protein-dependent transport system inner membrane component BGM07_019490 PF12911 N-terminal TM domain of oligopeptide transport permease C BGM07_019490 PF00528 Binding-protein-dependent transport system inner membrane component BGM07_019495 PF00005 ABC transporter BGM07_019495 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BGM07_019500 PF00005 ABC transporter BGM07_019510 PF02833 DHHA2 domain BGM07_019510 PF01368 DHH family BGM07_019520 PF16875 Glycosyl hydrolase family 36 N-terminal domain BGM07_019520 PF16874 Glycosyl hydrolase family 36 C-terminal domain BGM07_019525 PF00384 Molybdopterin oxidoreductase BGM07_019525 PF18364 Molybdopterin oxidoreductase N-terminal domain BGM07_019525 PF01568 Molydopterin dinucleotide binding domain BGM07_019530 PF03264 NapC/NirT cytochrome c family, N-terminal region BGM07_019535 PF06796 Periplasmic nitrate reductase protein NapE BGM07_019540 PF03649 Uncharacterised protein family (UPF0014) BGM07_019550 PF01226 Formate/nitrite transporter BGM07_019575 PF02698 DUF218 domain BGM07_019580 PF00265 Thymidine kinase BGM07_019585 PF09190 DALR domain BGM07_019585 PF01406 tRNA synthetases class I (C) catalytic domain BGM07_019590 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BGM07_019595 PF00149 Calcineurin-like phosphoesterase BGM07_019600 PF08668 HDOD domain BGM07_019600 PF00563 EAL domain BGM07_019605 PF02810 SEC-C motif BGM07_019610 PF01502 Phosphoribosyl-AMP cyclohydrolase BGM07_019610 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BGM07_019615 PF00977 Histidine biosynthesis protein BGM07_019620 PF00977 Histidine biosynthesis protein BGM07_019625 PF00117 Glutamine amidotransferase class-I BGM07_019630 PF00475 Imidazoleglycerol-phosphate dehydratase BGM07_019630 PF08645 Polynucleotide kinase 3 phosphatase BGM07_019635 PF00155 Aminotransferase class I and II BGM07_019640 PF00815 Histidinol dehydrogenase BGM07_019645 PF01634 ATP phosphoribosyltransferase BGM07_019645 PF08029 HisG, C-terminal domain BGM07_019650 PF00072 Response regulator receiver domain BGM07_019650 PF00158 Sigma-54 interaction domain BGM07_019650 PF02954 Bacterial regulatory protein, Fis family BGM07_019660 PF03553 Na+/H+ antiporter family BGM07_019665 PF00816 H-NS histone family BGM07_019670 PF00294 pfkB family carbohydrate kinase BGM07_019685 PF04356 Protein of unknown function (DUF489) BGM07_019690 PF00206 Lyase BGM07_019690 PF08328 Adenylosuccinate lyase C-terminal BGM07_019730 PF00106 short chain dehydrogenase BGM07_019740 PF01435 Peptidase family M48 BGM07_019755 PF08241 Methyltransferase domain BGM07_019760 PF00155 Aminotransferase class I and II BGM07_019765 PF04055 Radical SAM superfamily BGM07_019765 PF06968 Biotin and Thiamin Synthesis associated domain BGM07_019770 PF00202 Aminotransferase class-III BGM07_019775 PF01258 Prokaryotic dksA/traR C4-type zinc finger BGM07_019790 PF02403 Seryl-tRNA synthetase N-terminal domain BGM07_019790 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BGM07_019795 PF12002 MgsA AAA+ ATPase C terminal BGM07_019795 PF00004 ATPase family associated with various cellular activities (AAA) BGM07_019795 PF16193 AAA C-terminal domain BGM07_019800 PF03548 Outer membrane lipoprotein carrier protein LolA BGM07_019805 PF01580 FtsK/SpoIIIE family BGM07_019805 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BGM07_019805 PF17854 FtsK alpha domain BGM07_019805 PF09397 Ftsk gamma domain BGM07_019810 PF01037 Lrp/AsnC ligand binding domain BGM07_019815 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BGM07_019815 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BGM07_019825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_019825 PF03466 LysR substrate binding domain BGM07_019835 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) BGM07_019840 PF03372 Endonuclease/Exonuclease/phosphatase family BGM07_019850 PF00579 tRNA synthetases class I (W and Y) BGM07_019870 PF00873 AcrB/AcrD/AcrF family BGM07_019875 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BGM07_019875 PF00529 HlyD membrane-fusion protein of T1SS BGM07_019885 PF12729 Four helix bundle sensory module for signal transduction BGM07_019885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGM07_019885 PF00672 HAMP domain BGM07_019895 PF06610 L-alanine exporter BGM07_019900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_019900 PF00512 His Kinase A (phospho-acceptor) domain BGM07_019900 PF09308 LuxQ, periplasmic BGM07_019900 PF00072 Response regulator receiver domain BGM07_019910 PF03738 Glutathionylspermidine synthase preATP-grasp BGM07_019920 PF03994 Domain of Unknown Function (DUF350) BGM07_019930 PF02445 Quinolinate synthetase A protein BGM07_019935 PF13174 Tetratricopeptide repeat BGM07_019935 PF16331 TolA binding protein trimerisation BGM07_019940 PF00691 OmpA family BGM07_019945 PF04052 TolB amino-terminal domain BGM07_019945 PF07676 WD40-like Beta Propeller Repeat BGM07_019955 PF02472 Biopolymer transport protein ExbD/TolR BGM07_019960 PF01618 MotA/TolQ/ExbB proton channel family BGM07_019965 PF03061 Thioesterase superfamily BGM07_019975 PF08173 Membrane bound YbgT-like protein BGM07_019980 PF02322 Cytochrome bd terminal oxidase subunit II BGM07_019985 PF01654 Cytochrome bd terminal oxidase subunit I BGM07_019990 PF17864 RuvB AAA lid domain BGM07_019990 PF05491 RuvB C-terminal winged helix domain BGM07_019990 PF05496 Holliday junction DNA helicase RuvB P-loop domain BGM07_019995 PF07499 RuvA, C-terminal domain BGM07_019995 PF01330 RuvA N terminal domain BGM07_020000 PF02203 Tar ligand binding domain homologue BGM07_020000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGM07_020000 PF00672 HAMP domain BGM07_020005 PF02075 Crossover junction endodeoxyribonuclease RuvC BGM07_020010 PF02938 GAD domain BGM07_020010 PF00152 tRNA synthetases class II (D, K and N) BGM07_020010 PF01336 OB-fold nucleic acid binding domain BGM07_020015 PF01904 Protein of unknown function DUF72 BGM07_020020 PF13649 Methyltransferase domain BGM07_020025 PF08003 Protein of unknown function (DUF1698) BGM07_020035 PF18030 RimK PreATP-grasp domain BGM07_020035 PF08443 RimK-like ATP-grasp domain BGM07_020045 PF08443 RimK-like ATP-grasp domain BGM07_020045 PF18030 RimK PreATP-grasp domain BGM07_020055 PF16330 MukB hinge domain BGM07_020055 PF04310 MukB N-terminal BGM07_020060 PF04288 MukE-like family BGM07_020065 PF03882 MukF winged-helix domain BGM07_020065 PF17192 MukF middle domain BGM07_020065 PF17193 MukF C-terminal domain BGM07_020075 PF02698 DUF218 domain BGM07_020080 PF00072 Response regulator receiver domain BGM07_020080 PF00486 Transcriptional regulatory protein, C terminal BGM07_020085 PF02613 Nitrate reductase delta subunit BGM07_020090 PF00356 Bacterial regulatory proteins, lacI family BGM07_020095 PF04993 TfoX N-terminal domain BGM07_020095 PF04994 TfoX C-terminal domain BGM07_020115 PF00534 Glycosyl transferases group 1 BGM07_020115 PF08323 Starch synthase catalytic domain BGM07_020120 PF00483 Nucleotidyl transferase BGM07_020125 PF01396 Topoisomerase DNA binding C4 zinc finger BGM07_020125 PF08272 Topoisomerase I zinc-ribbon-like BGM07_020125 PF01131 DNA topoisomerase BGM07_020125 PF01751 Toprim domain BGM07_020130 PF10692 Protein of unknown function (DUF2498) BGM07_020135 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BGM07_020145 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BGM07_020150 PF04376 Arginine-tRNA-protein transferase, N terminus BGM07_020150 PF04377 Arginine-tRNA-protein transferase, C terminus BGM07_020155 PF01176 Translation initiation factor 1A / IF-1 BGM07_020165 PF07724 AAA domain (Cdc48 subfamily) BGM07_020165 PF02861 Clp amino terminal domain, pathogenicity island component BGM07_020165 PF00004 ATPase family associated with various cellular activities (AAA) BGM07_020165 PF10431 C-terminal, D2-small domain, of ClpB protein BGM07_020165 PF17871 AAA lid domain BGM07_020170 PF02617 ATP-dependent Clp protease adaptor protein ClpS BGM07_020175 PF00313 'Cold-shock' DNA-binding domain BGM07_020180 PF03971 Monomeric isocitrate dehydrogenase BGM07_020185 PF00849 RNA pseudouridylate synthase BGM07_020190 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) BGM07_020200 PF13307 Helicase C-terminal domain BGM07_020200 PF06733 DEAD_2 BGM07_020205 PF01925 Sulfite exporter TauE/SafE BGM07_020210 PF07445 Primosomal replication protein priC BGM07_020215 PF10689 Protein of unknown function (DUF2496) BGM07_020220 PF03372 Endonuclease/Exonuclease/phosphatase family BGM07_020230 PF00528 Binding-protein-dependent transport system inner membrane component BGM07_020235 PF00528 Binding-protein-dependent transport system inner membrane component BGM07_020240 PF00497 Bacterial extracellular solute-binding proteins, family 3 BGM07_020245 PF00005 ABC transporter BGM07_020260 PF02901 Pyruvate formate lyase-like BGM07_020260 PF01228 Glycine radical BGM07_020270 PF04055 Radical SAM superfamily BGM07_020280 PF03887 YfbU domain BGM07_020285 PF08298 PrkA AAA domain BGM07_020285 PF06798 PrkA serine protein kinase C-terminal domain BGM07_020290 PF04285 Protein of unknown function (DUF444) BGM07_020295 PF04293 SpoVR like protein BGM07_020300 PF02348 Cytidylyltransferase BGM07_020305 PF03966 Trm112p-like protein BGM07_020310 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BGM07_020315 PF00664 ABC transporter transmembrane region BGM07_020315 PF00005 ABC transporter BGM07_020320 PF03772 Competence protein BGM07_020320 PF13567 Domain of unknown function (DUF4131) BGM07_020320 PF00753 Metallo-beta-lactamase superfamily BGM07_020330 PF02687 FtsX-like permease family BGM07_020330 PF12704 MacB-like periplasmic core domain BGM07_020335 PF00005 ABC transporter BGM07_020340 PF12704 MacB-like periplasmic core domain BGM07_020340 PF02687 FtsX-like permease family BGM07_020350 PF02559 CarD-like/TRCF domain BGM07_020350 PF00270 DEAD/DEAH box helicase BGM07_020350 PF00271 Helicase conserved C-terminal domain BGM07_020350 PF03461 TRCF domain BGM07_020350 PF17757 UvrB interaction domain BGM07_020365 PF07992 Pyridine nucleotide-disulphide oxidoreductase BGM07_020370 PF05728 Uncharacterised protein family (UPF0227) BGM07_020380 PF08139 Prokaryotic membrane lipoprotein lipid attachment site BGM07_020380 PF13036 Peptidoglycan-synthase activator LpoB BGM07_020395 PF01230 HIT domain BGM07_020400 PF00672 HAMP domain BGM07_020400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGM07_020410 PF01048 Phosphorylase superfamily BGM07_020415 PF00403 Heavy-metal-associated domain BGM07_020420 PF00571 CBS domain BGM07_020420 PF00478 IMP dehydrogenase / GMP reductase domain BGM07_020435 PF00037 4Fe-4S binding domain BGM07_020435 PF11953 Domain of unknown function (DUF3470) BGM07_020440 PF08032 RNA 2'-O ribose methyltransferase substrate binding BGM07_020440 PF00588 SpoU rRNA Methylase family BGM07_020475 PF00176 SNF2 family N-terminal domain BGM07_020475 PF00271 Helicase conserved C-terminal domain BGM07_020495 PF04851 Type III restriction enzyme, res subunit BGM07_020495 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) BGM07_020495 PF00271 Helicase conserved C-terminal domain BGM07_020495 PF08463 EcoEI R protein C-terminal BGM07_020500 PF01420 Type I restriction modification DNA specificity domain BGM07_020505 PF02384 N-6 DNA Methylase BGM07_020505 PF12161 HsdM N-terminal domain BGM07_020550 PF17152 Periplasmic sensor domain BGM07_020550 PF00990 Diguanylate cyclase, GGDEF domain BGM07_020560 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BGM07_020565 PF09619 Type III secretion system lipoprotein chaperone (YscW) BGM07_020580 PF13404 AsnC-type helix-turn-helix domain BGM07_020580 PF01037 Lrp/AsnC ligand binding domain BGM07_020585 PF00291 Pyridoxal-phosphate dependent enzyme BGM07_020605 PF00873 AcrB/AcrD/AcrF family BGM07_020610 PF13533 Biotin-lipoyl like BGM07_020655 PF07690 Major Facilitator Superfamily BGM07_020660 PF03601 Conserved hypothetical protein 698 BGM07_020670 PF13193 AMP-binding enzyme C-terminal domain BGM07_020670 PF00501 AMP-binding enzyme BGM07_020675 PF13378 Enolase C-terminal domain-like BGM07_020680 PF00378 Enoyl-CoA hydratase/isomerase BGM07_020685 PF12697 Alpha/beta hydrolase family BGM07_020690 PF16582 Middle domain of thiamine pyrophosphate BGM07_020690 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BGM07_020690 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BGM07_020695 PF00425 chorismate binding enzyme BGM07_020700 PF00155 Aminotransferase class I and II BGM07_020710 PF01966 HD domain BGM07_020710 PF13286 Phosphohydrolase-associated domain BGM07_020730 PF13145 PPIC-type PPIASE domain BGM07_020735 PF00216 Bacterial DNA-binding protein BGM07_020740 PF05362 Lon protease (S16) C-terminal proteolytic domain BGM07_020740 PF02190 ATP-dependent protease La (LON) substrate-binding domain BGM07_020740 PF00004 ATPase family associated with various cellular activities (AAA) BGM07_020745 PF06689 ClpX C4-type zinc finger BGM07_020745 PF07724 AAA domain (Cdc48 subfamily) BGM07_020745 PF10431 C-terminal, D2-small domain, of ClpB protein BGM07_020750 PF00574 Clp protease BGM07_020755 PF05698 Bacterial trigger factor protein (TF) C-terminus BGM07_020755 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BGM07_020755 PF05697 Bacterial trigger factor protein (TF) BGM07_020765 PF02743 Cache domain BGM07_020765 PF00512 His Kinase A (phospho-acceptor) domain BGM07_020765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_020770 PF02954 Bacterial regulatory protein, Fis family BGM07_020770 PF00072 Response regulator receiver domain BGM07_020770 PF00158 Sigma-54 interaction domain BGM07_020780 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BGM07_020785 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BGM07_020790 PF03480 Bacterial extracellular solute-binding protein, family 7 BGM07_020795 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BGM07_020815 PF02386 Cation transport protein BGM07_020820 PF02254 TrkA-N domain BGM07_020820 PF02080 TrkA-C domain BGM07_020825 PF00270 DEAD/DEAH box helicase BGM07_020825 PF00271 Helicase conserved C-terminal domain BGM07_020830 PF03471 Transporter associated domain BGM07_020830 PF01595 Cyclin M transmembrane N-terminal domain BGM07_020830 PF00571 CBS domain BGM07_020840 PF04820 Tryptophan halogenase BGM07_020865 PF00550 Phosphopantetheine attachment site BGM07_020870 PF00550 Phosphopantetheine attachment site BGM07_020885 PF07977 FabA-like domain BGM07_020890 PF00535 Glycosyl transferase family 2 BGM07_020895 PF00221 Aromatic amino acid lyase BGM07_020920 PF00109 Beta-ketoacyl synthase, N-terminal domain BGM07_020920 PF02801 Beta-ketoacyl synthase, C-terminal domain BGM07_020925 PF07977 FabA-like domain BGM07_020935 PF02801 Beta-ketoacyl synthase, C-terminal domain BGM07_020935 PF00109 Beta-ketoacyl synthase, N-terminal domain BGM07_020950 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BGM07_020950 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BGM07_020955 PF07670 Nucleoside recognition BGM07_020955 PF07662 Na+ dependent nucleoside transporter C-terminus BGM07_020955 PF01773 Na+ dependent nucleoside transporter N-terminus BGM07_020960 PF03466 LysR substrate binding domain BGM07_020960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_020965 PF13406 Transglycosylase SLT domain BGM07_020970 PF05166 YcgL domain BGM07_020975 PF03775 Septum formation inhibitor MinC, C-terminal domain BGM07_020975 PF05209 Septum formation inhibitor MinC, N-terminal domain BGM07_020980 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BGM07_020985 PF03776 Septum formation topological specificity factor MinE BGM07_020990 PF01612 3'-5' exonuclease BGM07_020990 PF00570 HRDC domain BGM07_020995 PF13193 AMP-binding enzyme C-terminal domain BGM07_020995 PF00501 AMP-binding enzyme BGM07_021000 PF00561 alpha/beta hydrolase fold BGM07_021015 PF00814 Glycoprotease family BGM07_021020 PF13307 Helicase C-terminal domain BGM07_021020 PF04851 Type III restriction enzyme, res subunit BGM07_021025 PF01842 ACT domain BGM07_021025 PF00551 Formyl transferase BGM07_021030 PF06185 YecM protein BGM07_021035 PF03485 Arginyl tRNA synthetase N terminal domain BGM07_021035 PF05746 DALR anticodon binding domain BGM07_021035 PF00750 tRNA synthetases class I (R) BGM07_021050 PF07664 Ferrous iron transport protein B C terminus BGM07_021050 PF07670 Nucleoside recognition BGM07_021050 PF02421 Ferrous iron transport protein B BGM07_021050 PF17910 FeoB cytosolic helical domain BGM07_021055 PF04023 FeoA domain BGM07_021065 PF02311 AraC-like ligand binding domain BGM07_021065 PF12833 Helix-turn-helix domain BGM07_021070 PF01297 Zinc-uptake complex component A periplasmic BGM07_021075 PF00005 ABC transporter BGM07_021080 PF00950 ABC 3 transport family BGM07_021085 PF00549 CoA-ligase BGM07_021085 PF02629 CoA binding domain BGM07_021090 PF08442 ATP-grasp domain BGM07_021090 PF00549 CoA-ligase BGM07_021095 PF02817 e3 binding domain BGM07_021095 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BGM07_021095 PF00364 Biotin-requiring enzyme BGM07_021100 PF02779 Transketolase, pyrimidine binding domain BGM07_021100 PF16870 2-oxoglutarate dehydrogenase C-terminal BGM07_021100 PF00676 Dehydrogenase E1 component BGM07_021100 PF16078 2-oxoglutarate dehydrogenase N-terminus BGM07_021105 PF13085 2Fe-2S iron-sulfur cluster binding domain BGM07_021110 PF02910 Fumarate reductase flavoprotein C-term BGM07_021110 PF00890 FAD binding domain BGM07_021115 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BGM07_021120 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BGM07_021125 PF00285 Citrate synthase, C-terminal domain BGM07_021130 PF01784 NIF3 (NGG1p interacting factor 3) BGM07_021140 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BGM07_021140 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BGM07_021140 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BGM07_021140 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BGM07_021145 PF03925 SeqA protein C-terminal domain BGM07_021145 PF17206 SeqA protein N-terminal domain BGM07_021150 PF12697 Alpha/beta hydrolase family BGM07_021160 PF00258 Flavodoxin BGM07_021170 PF01475 Ferric uptake regulator family BGM07_021175 PF00749 tRNA synthetases class I (E and Q), catalytic domain BGM07_021175 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BGM07_021180 PF02378 Phosphotransferase system, EIIC BGM07_021180 PF00367 phosphotransferase system, EIIB BGM07_021180 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BGM07_021190 PF01979 Amidohydrolase family BGM07_021195 PF00480 ROK family BGM07_021195 PF01047 MarR family BGM07_021200 PF02254 TrkA-N domain BGM07_021200 PF00999 Sodium/hydrogen exchanger family BGM07_021205 PF13537 Glutamine amidotransferase domain BGM07_021205 PF00733 Asparagine synthase BGM07_021210 PF02357 Transcription termination factor nusG BGM07_021215 PF00854 POT family BGM07_021220 PF00762 Ferrochelatase BGM07_021225 PF05191 Adenylate kinase, active site lid BGM07_021230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_021230 PF00183 Hsp90 protein BGM07_021235 PF00486 Transcriptional regulatory protein, C terminal BGM07_021240 PF17323 Trans-membrane regulatory protein ToxS BGM07_021255 PF12850 Calcineurin-like phosphoesterase superfamily domain BGM07_021275 PF07556 Protein of unknown function (DUF1538) BGM07_021280 PF07556 Protein of unknown function (DUF1538) BGM07_021285 PF01370 NAD dependent epimerase/dehydratase family BGM07_021285 PF08338 Domain of unknown function (DUF1731) BGM07_021290 PF00106 short chain dehydrogenase BGM07_021295 PF00085 Thioredoxin BGM07_021300 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) BGM07_021305 PF01270 Glycosyl hydrolases family 8 BGM07_021310 PF03170 Bacterial cellulose synthase subunit BGM07_021315 PF03552 Cellulose synthase BGM07_021315 PF00535 Glycosyl transferase family 2 BGM07_021315 PF07238 PilZ domain BGM07_021320 PF06564 Cellulose biosynthesis protein BcsQ BGM07_021330 PF10995 Cellulose biosynthesis GIL BGM07_021335 PF11658 Cellulose biosynthesis protein BcsG BGM07_021340 PF01145 SPFH domain / Band 7 family BGM07_021340 PF16200 C-terminal region of band_7 BGM07_021350 PF03573 outer membrane porin, OprD family BGM07_021355 PF01653 NAD-dependent DNA ligase adenylation domain BGM07_021355 PF03120 NAD-dependent DNA ligase OB-fold domain BGM07_021355 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BGM07_021355 PF00533 BRCA1 C Terminus (BRCT) domain BGM07_021355 PF12826 Helix-hairpin-helix motif BGM07_021360 PF04354 ZipA, C-terminal FtsZ-binding domain BGM07_021370 PF00291 Pyridoxal-phosphate dependent enzyme BGM07_021380 PF00381 PTS HPr component phosphorylation site BGM07_021385 PF02896 PEP-utilising enzyme, TIM barrel domain BGM07_021385 PF05524 PEP-utilising enzyme, N-terminal BGM07_021385 PF00391 PEP-utilising enzyme, mobile domain BGM07_021390 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BGM07_021395 PF00669 Bacterial flagellin N-terminal helical region BGM07_021395 PF00700 Bacterial flagellin C-terminal helical region BGM07_021395 PF07196 Flagellin hook IN motif BGM07_021400 PF00669 Bacterial flagellin N-terminal helical region BGM07_021400 PF00700 Bacterial flagellin C-terminal helical region BGM07_021400 PF07196 Flagellin hook IN motif BGM07_021410 PF00669 Bacterial flagellin N-terminal helical region BGM07_021410 PF07196 Flagellin hook IN motif BGM07_021410 PF00700 Bacterial flagellin C-terminal helical region BGM07_021415 PF00669 Bacterial flagellin N-terminal helical region BGM07_021420 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BGM07_021420 PF07196 Flagellin hook IN motif BGM07_021425 PF10135 Rod binding protein BGM07_021425 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BGM07_021430 PF02119 Flagellar P-ring protein BGM07_021435 PF02107 Flagellar L-ring protein BGM07_021440 PF00460 Flagella basal body rod protein BGM07_021440 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BGM07_021445 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BGM07_021445 PF00460 Flagella basal body rod protein BGM07_021455 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BGM07_021455 PF00460 Flagella basal body rod protein BGM07_021455 PF07559 Flagellar basal body protein FlaE BGM07_021460 PF13861 FlgD Tudor-like domain BGM07_021460 PF03963 Flagellar hook capping protein - N-terminal region BGM07_021460 PF13860 FlgD Ig-like domain BGM07_021465 PF00460 Flagella basal body rod protein BGM07_021465 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BGM07_021470 PF00460 Flagella basal body rod protein BGM07_021475 PF03705 CheR methyltransferase, all-alpha domain BGM07_021475 PF01739 CheR methyltransferase, SAM binding domain BGM07_021480 PF00072 Response regulator receiver domain BGM07_021480 PF01584 CheW-like domain BGM07_021525 PF01389 OmpA-like transmembrane domain BGM07_021525 PF00691 OmpA family BGM07_021530 PF00749 tRNA synthetases class I (E and Q), catalytic domain BGM07_021535 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) BGM07_021540 PF13609 Gram-negative porin BGM07_021550 PF00403 Heavy-metal-associated domain BGM07_021565 PF00728 Glycosyl hydrolase family 20, catalytic domain BGM07_021565 PF02838 Glycosyl hydrolase family 20, domain 2 BGM07_021565 PF03173 Putative carbohydrate binding domain BGM07_021565 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain BGM07_021585 PF01713 Smr domain BGM07_021590 PF00849 RNA pseudouridylate synthase BGM07_021590 PF01479 S4 domain BGM07_021595 PF04073 Aminoacyl-tRNA editing domain BGM07_021600 PF02872 5'-nucleotidase, C-terminal domain BGM07_021600 PF00149 Calcineurin-like phosphoesterase BGM07_021605 PF00793 DAHP synthetase I family BGM07_021610 PF13369 Transglutaminase-like superfamily BGM07_021615 PF04247 Invasion gene expression up-regulator, SirB BGM07_021620 PF17827 PrmC N-terminal domain BGM07_021620 PF13847 Methyltransferase domain BGM07_021625 PF03462 PCRF domain BGM07_021625 PF00472 RF-1 domain BGM07_021630 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BGM07_021630 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BGM07_021630 PF01488 Shikimate / quinate 5-dehydrogenase BGM07_021635 PF03550 Outer membrane lipoprotein LolB BGM07_021640 PF08544 GHMP kinases C terminal BGM07_021640 PF00288 GHMP kinases N terminal domain BGM07_021645 PF14572 Phosphoribosyl synthetase-associated domain BGM07_021645 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BGM07_021650 PF01195 Peptidyl-tRNA hydrolase BGM07_021655 PF06071 Protein of unknown function (DUF933) BGM07_021655 PF01926 50S ribosome-binding GTPase BGM07_021770 PF01494 FAD binding domain BGM07_021775 PF04055 Radical SAM superfamily BGM07_021775 PF01938 TRAM domain BGM07_021775 PF00919 Uncharacterized protein family UPF0004 BGM07_021780 PF02562 PhoH-like protein BGM07_021785 PF02130 Uncharacterized protein family UPF0054 BGM07_021790 PF00571 CBS domain BGM07_021790 PF03471 Transporter associated domain BGM07_021795 PF00795 Carbon-nitrogen hydrolase BGM07_021800 PF07295 Zinc-ribbon containing domain BGM07_021805 PF00133 tRNA synthetases class I (I, L, M and V) BGM07_021805 PF08264 Anticodon-binding domain of tRNA BGM07_021805 PF13603 Leucyl-tRNA synthetase, Domain 2 BGM07_021810 PF04390 Lipopolysaccharide-assembly BGM07_021815 PF06144 DNA polymerase III, delta subunit BGM07_021815 PF14840 Processivity clamp loader gamma complex DNA pol III C-term BGM07_021825 PF02590 Predicted SPOUT methyltransferase BGM07_021830 PF03717 Penicillin-binding Protein dimerisation domain BGM07_021830 PF00905 Penicillin binding protein transpeptidase domain BGM07_021835 PF01098 Cell cycle protein BGM07_021840 PF03330 Lytic transglycolase BGM07_021840 PF05036 Sporulation related domain BGM07_021845 PF07943 Penicillin-binding protein 5, C-terminal domain BGM07_021845 PF00768 D-alanyl-D-alanine carboxypeptidase BGM07_021850 PF04359 Protein of unknown function (DUF493) BGM07_021855 PF03099 Biotin/lipoate A/B protein ligase family BGM07_021860 PF04055 Radical SAM superfamily BGM07_021860 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BGM07_021865 PF00464 Serine hydroxymethyltransferase BGM07_021870 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BGM07_021870 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BGM07_021885 PF00128 Alpha amylase, catalytic domain BGM07_021885 PF16657 Maltogenic Amylase, C-terminal domain BGM07_021890 PF00367 phosphotransferase system, EIIB BGM07_021890 PF02378 Phosphotransferase system, EIIC BGM07_021895 PF00356 Bacterial regulatory proteins, lacI family BGM07_021910 PF09383 NIL domain BGM07_021910 PF00005 ABC transporter BGM07_021915 PF00528 Binding-protein-dependent transport system inner membrane component BGM07_021920 PF03180 NLPA lipoprotein BGM07_021925 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) BGM07_021930 PF07348 Syd protein (SUKH-2) BGM07_021935 PF14489 QueF-like protein BGM07_021935 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term BGM07_021945 PF00990 Diguanylate cyclase, GGDEF domain BGM07_021945 PF00072 Response regulator receiver domain BGM07_021950 PF03641 Possible lysine decarboxylase BGM07_021950 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases BGM07_021950 PF11892 Domain of unknown function (DUF3412) BGM07_021955 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BGM07_021955 PF01367 5'-3' exonuclease, C-terminal SAM fold BGM07_021960 PF01223 DNA/RNA non-specific endonuclease BGM07_021965 PF01728 FtsJ-like methyltransferase BGM07_021965 PF18125 RlmM ferredoxin-like domain BGM07_021970 PF04241 Protein of unknown function (DUF423) BGM07_021980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_021980 PF03466 LysR substrate binding domain BGM07_021985 PF02926 THUMP domain BGM07_021985 PF02568 Thiamine biosynthesis protein (ThiI) BGM07_021990 PF00691 OmpA family BGM07_021995 PF01618 MotA/TolQ/ExbB proton channel family BGM07_022000 PF02609 Exonuclease VII small subunit BGM07_022005 PF00348 Polyprenyl synthetase BGM07_022010 PF02780 Transketolase, C-terminal domain BGM07_022010 PF02779 Transketolase, pyrimidine binding domain BGM07_022010 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BGM07_022015 PF04608 Phosphatidylglycerophosphatase A BGM07_022020 PF02769 AIR synthase related protein, C-terminal domain BGM07_022020 PF00586 AIR synthase related protein, N-terminal domain BGM07_022025 PF01029 NusB family BGM07_022030 PF00885 6,7-dimethyl-8-ribityllumazine synthase BGM07_022035 PF00925 GTP cyclohydrolase II BGM07_022035 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BGM07_022040 PF00677 Lumazine binding domain BGM07_022045 PF01872 RibD C-terminal domain BGM07_022045 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BGM07_022050 PF03477 ATP cone domain BGM07_022055 PF00171 Aldehyde dehydrogenase family BGM07_022060 PF00696 Amino acid kinase family BGM07_022060 PF01472 PUA domain BGM07_022065 PF07417 Sigma factor-binding transcriptional regulator Crl BGM07_022075 PF00156 Phosphoribosyl transferase domain BGM07_022080 PF00860 Permease family BGM07_022085 PF07687 Peptidase dimerisation domain BGM07_022085 PF01546 Peptidase family M20/M25/M40 BGM07_022110 PF02769 AIR synthase related protein, C-terminal domain BGM07_022110 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal BGM07_022110 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BGM07_022115 PF01464 Transglycosylase SLT domain BGM07_022115 PF00497 Bacterial extracellular solute-binding proteins, family 3 BGM07_022125 PF14437 MafB19-like deaminase BGM07_022130 PF03806 AbgT putative transporter family BGM07_022155 PF07963 Prokaryotic N-terminal methylation motif BGM07_022155 PF00114 Pilin (bacterial filament) BGM07_022160 PF07963 Prokaryotic N-terminal methylation motif BGM07_022160 PF00114 Pilin (bacterial filament) BGM07_022165 PF00226 DnaJ domain BGM07_022165 PF00684 DnaJ central domain BGM07_022165 PF01556 DnaJ C terminal domain BGM07_022170 PF00012 Hsp70 protein BGM07_022175 PF00375 Sodium:dicarboxylate symporter family BGM07_022180 PF01025 GrpE BGM07_022185 PF01513 ATP-NAD kinase BGM07_022195 PF02463 RecF/RecN/SMC N terminal domain BGM07_022200 PF04355 SmpA / OmlA family BGM07_022205 PF03658 RnfH family Ubiquitin BGM07_022210 PF03364 Polyketide cyclase / dehydrase and lipid transport BGM07_022215 PF01668 SmpB protein BGM07_022225 PF13356 Arm DNA-binding domain BGM07_022225 PF00589 Phage integrase family BGM07_022275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_022275 PF03466 LysR substrate binding domain BGM07_022280 PF00795 Carbon-nitrogen hydrolase BGM07_022280 PF00583 Acetyltransferase (GNAT) family BGM07_022300 PF00202 Aminotransferase class-III BGM07_022305 PF01053 Cys/Met metabolism PLP-dependent enzyme BGM07_022310 PF07969 Amidohydrolase family BGM07_022330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_022330 PF03466 LysR substrate binding domain BGM07_022335 PF01266 FAD dependent oxidoreductase BGM07_022340 PF01235 Sodium:alanine symporter family BGM07_022350 PF01184 GPR1/FUN34/yaaH family BGM07_022355 PF06483 Chitinase C BGM07_022355 PF00704 Glycosyl hydrolases family 18 BGM07_022360 PF03553 Na+/H+ antiporter family BGM07_022365 PF00117 Glutamine amidotransferase class-I BGM07_022365 PF00958 GMP synthase C terminal domain BGM07_022365 PF02540 NAD synthase BGM07_022370 PF00571 CBS domain BGM07_022370 PF00478 IMP dehydrogenase / GMP reductase domain BGM07_022375 PF02601 Exonuclease VII, large subunit BGM07_022375 PF13742 OB-fold nucleic acid binding domain BGM07_022390 PF01926 50S ribosome-binding GTPase BGM07_022390 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BGM07_022395 PF13360 PQQ-like domain BGM07_022400 PF09976 Tetratricopeptide repeat-like domain BGM07_022405 PF03129 Anticodon binding domain BGM07_022405 PF13393 Histidyl-tRNA synthetase BGM07_022410 PF04551 GcpE protein BGM07_022415 PF13464 Domain of unknown function (DUF4115) BGM07_022420 PF04055 Radical SAM superfamily BGM07_022425 PF00334 Nucleoside diphosphate kinase BGM07_022430 PF00883 Cytosol aminopeptidase family, catalytic domain BGM07_022430 PF12404 Peptidase BGM07_022435 PF04384 Iron-sulphur cluster assembly BGM07_022440 PF00111 2Fe-2S iron-sulfur cluster binding domain BGM07_022445 PF00012 Hsp70 protein BGM07_022450 PF00226 DnaJ domain BGM07_022450 PF07743 HSCB C-terminal oligomerisation domain BGM07_022455 PF01521 Iron-sulphur cluster biosynthesis BGM07_022460 PF01592 NifU-like N terminal domain BGM07_022465 PF00266 Aminotransferase class-V BGM07_022470 PF02082 Transcriptional regulator BGM07_022475 PF00588 SpoU rRNA Methylase family BGM07_022480 PF00459 Inositol monophosphatase family BGM07_022485 PF02355 Protein export membrane protein BGM07_022485 PF07549 SecD/SecF GG Motif BGM07_022490 PF02355 Protein export membrane protein BGM07_022490 PF13721 SecD export protein N-terminal TM region BGM07_022490 PF07549 SecD/SecF GG Motif BGM07_022495 PF02699 Preprotein translocase subunit BGM07_022500 PF01702 Queuine tRNA-ribosyltransferase BGM07_022505 PF02547 Queuosine biosynthesis protein BGM07_022520 PF00571 CBS domain BGM07_022525 PF00463 Isocitrate lyase family BGM07_022530 PF01274 Malate synthase BGM07_022535 PF03466 LysR substrate binding domain BGM07_022535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_022540 PF00578 AhpC/TSA family BGM07_022540 PF10417 C-terminal domain of 1-Cys peroxiredoxin BGM07_022550 PF03932 CutC family BGM07_022555 PF03976 Polyphosphate kinase 2 (PPK2) BGM07_022560 PF01895 PhoU domain BGM07_022565 PF00005 ABC transporter BGM07_022570 PF00528 Binding-protein-dependent transport system inner membrane component BGM07_022575 PF00528 Binding-protein-dependent transport system inner membrane component BGM07_022580 PF02503 Polyphosphate kinase middle domain BGM07_022580 PF17941 Polyphosphate kinase C-terminal domain 1 BGM07_022580 PF13090 Polyphosphate kinase C-terminal domain 2 BGM07_022580 PF13089 Polyphosphate kinase N-terminal domain BGM07_022585 PF02541 Ppx/GppA phosphatase family BGM07_022590 PF12849 PBP superfamily domain BGM07_022595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_022595 PF00989 PAS fold BGM07_022595 PF00512 His Kinase A (phospho-acceptor) domain BGM07_022595 PF11808 Phosphate regulon sensor protein PhoR BGM07_022600 PF00072 Response regulator receiver domain BGM07_022600 PF00486 Transcriptional regulatory protein, C terminal BGM07_022610 PF04381 Putative exonuclease, RdgC BGM07_022620 PF00037 4Fe-4S binding domain BGM07_022630 PF03411 Penicillin-insensitive murein endopeptidase BGM07_022680 PF17871 AAA lid domain BGM07_022680 PF07724 AAA domain (Cdc48 subfamily) BGM07_022680 PF00004 ATPase family associated with various cellular activities (AAA) BGM07_022680 PF02861 Clp amino terminal domain, pathogenicity island component BGM07_022680 PF10431 C-terminal, D2-small domain, of ClpB protein BGM07_022690 PF00849 RNA pseudouridylate synthase BGM07_022690 PF01479 S4 domain BGM07_022695 PF13525 Outer membrane lipoprotein BGM07_022700 PF01464 Transglycosylase SLT domain BGM07_022700 PF00497 Bacterial extracellular solute-binding proteins, family 3 BGM07_022705 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BGM07_022710 PF01817 Chorismate mutase type II BGM07_022710 PF00800 Prephenate dehydratase BGM07_022715 PF01931 Protein of unknown function DUF84 BGM07_022720 PF01371 Trp repressor protein BGM07_022725 PF01464 Transglycosylase SLT domain BGM07_022725 PF14718 Soluble lytic murein transglycosylase L domain BGM07_022730 PF00005 ABC transporter BGM07_022730 PF12848 ABC transporter BGM07_022740 PF07238 PilZ domain BGM07_022745 PF04225 Opacity-associated protein A LysM-like domain BGM07_022745 PF01551 Peptidase family M23 BGM07_022750 PF01817 Chorismate mutase type II BGM07_022750 PF02153 Prephenate dehydrogenase BGM07_022755 PF00793 DAHP synthetase I family BGM07_022760 PF00933 Glycosyl hydrolase family 3 N terminal domain BGM07_022765 PF03702 Anhydro-N-acetylmuramic acid kinase BGM07_022770 PF13580 SIS domain BGM07_022785 PF02554 Carbon starvation protein CstA BGM07_022790 PF06580 Histidine kinase BGM07_022790 PF07694 5TMR of 5TMR-LYT BGM07_022795 PF04397 LytTr DNA-binding domain BGM07_022795 PF00072 Response regulator receiver domain BGM07_022800 PF02401 LytB protein BGM07_022805 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BGM07_022810 PF01252 Signal peptidase (SPase) II BGM07_022815 PF06827 Zinc finger found in FPG and IleRS BGM07_022815 PF00133 tRNA synthetases class I (I, L, M and V) BGM07_022815 PF08264 Anticodon-binding domain of tRNA BGM07_022820 PF06574 FAD synthetase BGM07_022820 PF01687 Riboflavin kinase BGM07_022825 PF03023 Lipid II flippase MurJ BGM07_022830 PF01649 Ribosomal protein S20 BGM07_022840 PF01022 Bacterial regulatory protein, arsR family BGM07_022845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_022845 PF03466 LysR substrate binding domain BGM07_022850 PF02690 Na+/Pi-cotransporter BGM07_022860 PF00303 Thymidylate synthase BGM07_022865 PF01790 Prolipoprotein diacylglyceryl transferase BGM07_022870 PF01925 Sulfite exporter TauE/SafE BGM07_022875 PF01590 GAF domain BGM07_022875 PF00391 PEP-utilising enzyme, mobile domain BGM07_022875 PF05524 PEP-utilising enzyme, N-terminal BGM07_022875 PF02896 PEP-utilising enzyme, TIM barrel domain BGM07_022880 PF00293 NUDIX domain BGM07_022890 PF02976 DNA mismatch repair enzyme MutH BGM07_022900 PF00248 Aldo/keto reductase family BGM07_022910 PF02954 Bacterial regulatory protein, Fis family BGM07_022910 PF00072 Response regulator receiver domain BGM07_022910 PF00158 Sigma-54 interaction domain BGM07_022915 PF00152 tRNA synthetases class II (D, K and N) BGM07_022915 PF01336 OB-fold nucleic acid binding domain BGM07_022920 PF00472 RF-1 domain BGM07_022920 PF03462 PCRF domain BGM07_022925 PF01368 DHH family BGM07_022925 PF02272 DHHA1 domain BGM07_022925 PF17768 RecJ OB domain BGM07_022930 PF10411 Disulfide bond isomerase protein N-terminus BGM07_022930 PF13098 Thioredoxin-like domain BGM07_022935 PF00589 Phage integrase family BGM07_022935 PF02899 Phage integrase, N-terminal SAM-like domain BGM07_022940 PF00258 Flavodoxin BGM07_022945 PF05525 Branched-chain amino acid transport protein BGM07_022950 PF05175 Methyltransferase small domain BGM07_022955 PF00270 DEAD/DEAH box helicase BGM07_022955 PF00271 Helicase conserved C-terminal domain BGM07_022960 PF03883 Peroxide stress protein YaaA BGM07_022965 PF01235 Sodium:alanine symporter family BGM07_022980 PF03167 Uracil DNA glycosylase superfamily BGM07_022990 PF01261 Xylose isomerase-like TIM barrel BGM07_022995 PF01228 Glycine radical BGM07_023000 PF00291 Pyridoxal-phosphate dependent enzyme BGM07_023000 PF14821 Threonine synthase N terminus BGM07_023005 PF00288 GHMP kinases N terminal domain BGM07_023005 PF08544 GHMP kinases C terminal BGM07_023010 PF01842 ACT domain BGM07_023010 PF03447 Homoserine dehydrogenase, NAD binding domain BGM07_023010 PF00696 Amino acid kinase family BGM07_023010 PF00742 Homoserine dehydrogenase BGM07_023010 PF13840 ACT domain BGM07_023025 PF03737 Aldolase/RraA BGM07_023040 PF00072 Response regulator receiver domain BGM07_023040 PF00486 Transcriptional regulatory protein, C terminal BGM07_023050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_023050 PF00512 His Kinase A (phospho-acceptor) domain BGM07_023050 PF18415 Histidine kinase receptor ArcB trans-membrane domain BGM07_023050 PF01627 Hpt domain BGM07_023050 PF00989 PAS fold BGM07_023050 PF00072 Response regulator receiver domain BGM07_023055 PF00990 Diguanylate cyclase, GGDEF domain BGM07_023055 PF01590 GAF domain BGM07_023055 PF00360 Phytochrome region BGM07_023055 PF00563 EAL domain BGM07_023060 PF04055 Radical SAM superfamily BGM07_023060 PF16199 Radical_SAM C-terminal domain BGM07_023065 PF00310 Glutamine amidotransferases class-II BGM07_023065 PF04898 Glutamate synthase central domain BGM07_023065 PF01645 Conserved region in glutamate synthase BGM07_023065 PF01493 GXGXG motif BGM07_023070 PF07992 Pyridine nucleotide-disulphide oxidoreductase BGM07_023070 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BGM07_023075 PF01493 GXGXG motif BGM07_023075 PF01645 Conserved region in glutamate synthase BGM07_023075 PF00310 Glutamine amidotransferases class-II BGM07_023075 PF04898 Glutamate synthase central domain BGM07_023080 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BGM07_023080 PF07992 Pyridine nucleotide-disulphide oxidoreductase BGM07_023090 PF01048 Phosphorylase superfamily BGM07_023095 PF03186 CobD/Cbib protein BGM07_023095 PF17113 Regulatory signalling modulator protein AmpE BGM07_023100 PF01497 Periplasmic binding protein BGM07_023105 PF03458 UPF0126 domain BGM07_023110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_023110 PF03466 LysR substrate binding domain BGM07_023115 PF01925 Sulfite exporter TauE/SafE BGM07_023130 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BGM07_023130 PF02142 MGS-like domain BGM07_023130 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BGM07_023135 PF00117 Glutamine amidotransferase class-I BGM07_023135 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BGM07_023140 PF05173 Dihydrodipicolinate reductase, C-terminus BGM07_023140 PF01113 Dihydrodipicolinate reductase, N-terminus BGM07_023145 PF00293 NUDIX domain BGM07_023150 PF07516 SecA Wing and Scaffold domain BGM07_023150 PF02810 SEC-C motif BGM07_023150 PF07517 SecA DEAD-like domain BGM07_023150 PF01043 SecA preprotein cross-linking domain BGM07_023160 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BGM07_023165 PF12327 FtsZ family, C-terminal domain BGM07_023165 PF00091 Tubulin/FtsZ family, GTPase domain BGM07_023170 PF02491 SHS2 domain inserted in FTSA BGM07_023175 PF03799 Cell division protein FtsQ BGM07_023175 PF08478 POTRA domain, FtsQ-type BGM07_023180 PF02875 Mur ligase family, glutamate ligase domain BGM07_023180 PF08245 Mur ligase middle domain BGM07_023180 PF01225 Mur ligase family, catalytic domain BGM07_023185 PF04101 Glycosyltransferase family 28 C-terminal domain BGM07_023185 PF03033 Glycosyltransferase family 28 N-terminal domain BGM07_023190 PF01098 Cell cycle protein BGM07_023195 PF08245 Mur ligase middle domain BGM07_023195 PF02875 Mur ligase family, glutamate ligase domain BGM07_023200 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BGM07_023200 PF00953 Glycosyl transferase family 4 BGM07_023205 PF01225 Mur ligase family, catalytic domain BGM07_023205 PF08245 Mur ligase middle domain BGM07_023205 PF02875 Mur ligase family, glutamate ligase domain BGM07_023210 PF02875 Mur ligase family, glutamate ligase domain BGM07_023210 PF01225 Mur ligase family, catalytic domain BGM07_023210 PF08245 Mur ligase middle domain BGM07_023215 PF00905 Penicillin binding protein transpeptidase domain BGM07_023215 PF03717 Penicillin-binding Protein dimerisation domain BGM07_023220 PF04999 Cell division protein FtsL BGM07_023225 PF01795 MraW methylase family BGM07_023240 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BGM07_023245 PF04348 LppC putative lipoprotein BGM07_023250 PF02021 Uncharacterised protein family UPF0102 BGM07_023255 PF13580 SIS domain BGM07_023260 PF04972 BON domain BGM07_023265 PF04386 Stringent starvation protein B BGM07_023270 PF00043 Glutathione S-transferase, C-terminal domain BGM07_023270 PF02798 Glutathione S-transferase, N-terminal domain BGM07_023275 PF02167 Cytochrome C1 family BGM07_023280 PF00033 Cytochrome b/b6/petB BGM07_023280 PF00032 Cytochrome b(C-terminal)/b6/petD BGM07_023285 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal BGM07_023285 PF00355 Rieske [2Fe-2S] domain BGM07_023290 PF00380 Ribosomal protein S9/S16 BGM07_023295 PF00572 Ribosomal protein L13 BGM07_023305 PF03969 AFG1-like ATPase BGM07_023310 PF06295 Protein of unknown function (DUF1043) BGM07_023315 PF00595 PDZ domain BGM07_023320 PF13180 PDZ domain BGM07_023325 PF00521 DNA gyrase/topoisomerase IV, subunit A BGM07_023325 PF03989 DNA gyrase C-terminal domain, beta-propeller BGM07_023330 PF01751 Toprim domain BGM07_023330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_023330 PF00986 DNA gyrase B subunit, carboxyl terminus BGM07_023330 PF00204 DNA gyrase B BGM07_023335 PF05728 Uncharacterised protein family (UPF0227) BGM07_023340 PF00149 Calcineurin-like phosphoesterase BGM07_023345 PF06853 Protein of unknown function (DUF1249) BGM07_023350 PF00293 NUDIX domain BGM07_023355 PF02321 Outer membrane efflux protein BGM07_023360 PF00294 pfkB family carbohydrate kinase BGM07_023360 PF01467 Cytidylyltransferase-like BGM07_023365 PF08335 GlnD PII-uridylyltransferase BGM07_023365 PF03710 Glutamate-ammonia ligase adenylyltransferase BGM07_023370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGM07_023370 PF00672 HAMP domain BGM07_023380 PF01928 CYTH domain BGM07_023385 PF01865 Protein of unknown function DUF47 BGM07_023390 PF01384 Phosphate transporter family BGM07_023395 PF08239 Bacterial SH3 domain BGM07_023405 PF13401 AAA domain BGM07_023405 PF01471 Putative peptidoglycan binding domain BGM07_023410 PF12627 Probable RNA and SrmB- binding site of polymerase A BGM07_023410 PF01743 Poly A polymerase head domain BGM07_023410 PF01966 HD domain BGM07_023415 PF02673 Bacitracin resistance protein BacA BGM07_023420 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BGM07_023425 PF02152 Dihydroneopterin aldolase BGM07_023430 PF02660 Glycerol-3-phosphate acyltransferase BGM07_023435 PF12697 Alpha/beta hydrolase family BGM07_023440 PF00814 Glycoprotease family BGM07_023445 PF01165 Ribosomal protein S21 BGM07_023450 PF09424 Yqey-like protein BGM07_023455 PF08278 DNA primase DnaG DnaB-binding BGM07_023455 PF08275 DNA primase catalytic core, N-terminal domain BGM07_023455 PF01807 CHC2 zinc finger BGM07_023455 PF10410 DnaB-helicase binding domain of primase BGM07_023460 PF04539 Sigma-70 region 3 BGM07_023460 PF04546 Sigma-70, non-essential region BGM07_023460 PF03979 Sigma-70 factor, region 1.1 BGM07_023460 PF00140 Sigma-70 factor, region 1.2 BGM07_023460 PF04542 Sigma-70 region 2 BGM07_023460 PF04545 Sigma-70, region 4 BGM07_023470 PF00589 Phage integrase family BGM07_023510 PF18821 Large polyvalent protein-associated domain 7 BGM07_023510 PF03432 Relaxase/Mobilisation nuclease domain BGM07_023550 PF07237 Protein of unknown function (DUF1428) BGM07_023570 PF03180 NLPA lipoprotein BGM07_023605 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BGM07_023605 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BGM07_023605 PF02378 Phosphotransferase system, EIIC BGM07_023610 PF01232 Mannitol dehydrogenase Rossmann domain BGM07_023610 PF08125 Mannitol dehydrogenase C-terminal domain BGM07_023615 PF05068 Mannitol repressor BGM07_023620 PF13419 Haloacid dehalogenase-like hydrolase BGM07_023625 PF00672 HAMP domain BGM07_023625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_023625 PF00512 His Kinase A (phospho-acceptor) domain BGM07_023630 PF00486 Transcriptional regulatory protein, C terminal BGM07_023630 PF00072 Response regulator receiver domain BGM07_023640 PF01380 SIS domain BGM07_023645 PF08220 DeoR-like helix-turn-helix domain BGM07_023645 PF00455 DeoR C terminal sensor domain BGM07_023650 PF02887 Pyruvate kinase, alpha/beta domain BGM07_023650 PF00224 Pyruvate kinase, barrel domain BGM07_023660 PF07694 5TMR of 5TMR-LYT BGM07_023660 PF00990 Diguanylate cyclase, GGDEF domain BGM07_023665 PF10369 Small subunit of acetolactate synthase BGM07_023670 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BGM07_023670 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BGM07_023670 PF00205 Thiamine pyrophosphate enzyme, central domain BGM07_023675 PF00501 AMP-binding enzyme BGM07_023680 PF03466 LysR substrate binding domain BGM07_023680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_023700 PF00682 HMGL-like BGM07_023700 PF08502 LeuA allosteric (dimerisation) domain BGM07_023705 PF00180 Isocitrate/isopropylmalate dehydrogenase BGM07_023710 PF00330 Aconitase family (aconitate hydratase) BGM07_023715 PF00694 Aconitase C-terminal domain BGM07_023725 PF05099 Tellurite resistance protein TerB BGM07_023725 PF00226 DnaJ domain BGM07_023730 PF03968 OstA-like protein BGM07_023730 PF04453 LPS transport system D BGM07_023735 PF09312 SurA N-terminal domain BGM07_023740 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BGM07_023745 PF00398 Ribosomal RNA adenine dimethylase BGM07_023750 PF04379 ApaG domain BGM07_023755 PF00149 Calcineurin-like phosphoesterase BGM07_023760 PF00186 Dihydrofolate reductase BGM07_023765 PF12821 Threonine/Serine exporter, ThrE BGM07_023770 PF06738 Putative threonine/serine exporter BGM07_023775 PF01018 GTP1/OBG BGM07_023775 PF01926 50S ribosome-binding GTPase BGM07_023780 PF01016 Ribosomal L27 protein BGM07_023785 PF00829 Ribosomal prokaryotic L21 protein BGM07_023790 PF00348 Polyprenyl synthetase BGM07_023800 PF00056 lactate/malate dehydrogenase, NAD binding domain BGM07_023800 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BGM07_023805 PF01316 Arginine repressor, DNA binding domain BGM07_023805 PF02863 Arginine repressor, C-terminal domain BGM07_023815 PF16868 NMT1-like family BGM07_023835 PF00005 ABC transporter BGM07_023840 PF00528 Binding-protein-dependent transport system inner membrane component BGM07_023850 PF02441 Flavoprotein BGM07_023855 PF01225 Mur ligase family, catalytic domain BGM07_023855 PF02875 Mur ligase family, glutamate ligase domain BGM07_023855 PF08245 Mur ligase middle domain BGM07_023860 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BGM07_023865 PF00719 Inorganic pyrophosphatase BGM07_023875 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like BGM07_023880 PF04357 TamB, inner membrane protein subunit of TAM complex BGM07_023885 PF17243 POTRA domain TamA domain 1 BGM07_023885 PF01103 Surface antigen BGM07_023890 PF01625 Peptide methionine sulfoxide reductase BGM07_023895 PF06526 Protein of unknown function (DUF1107) BGM07_023900 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) BGM07_023905 PF10795 Protein of unknown function (DUF2607) BGM07_023915 PF00005 ABC transporter BGM07_023940 PF02080 TrkA-C domain BGM07_023940 PF03600 Citrate transporter BGM07_023945 PF00009 Elongation factor Tu GTP binding domain BGM07_023950 PF01507 Phosphoadenosine phosphosulfate reductase family BGM07_023955 PF14824 Sirohaem biosynthesis protein central BGM07_023955 PF10414 Sirohaem synthase dimerisation region BGM07_023955 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BGM07_023960 PF02872 5'-nucleotidase, C-terminal domain BGM07_023960 PF00149 Calcineurin-like phosphoesterase BGM07_023970 PF03880 DbpA RNA binding domain BGM07_023970 PF00271 Helicase conserved C-terminal domain BGM07_023970 PF00270 DEAD/DEAH box helicase BGM07_023975 PF13673 Acetyltransferase (GNAT) domain BGM07_023985 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BGM07_023985 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BGM07_023995 PF01196 Ribosomal protein L17 BGM07_024000 PF01000 RNA polymerase Rpb3/RpoA insert domain BGM07_024000 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BGM07_024000 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BGM07_024005 PF01479 S4 domain BGM07_024005 PF00163 Ribosomal protein S4/S9 N-terminal domain BGM07_024010 PF00411 Ribosomal protein S11 BGM07_024015 PF00416 Ribosomal protein S13/S18 BGM07_024020 PF00444 Ribosomal protein L36 BGM07_024025 PF00344 SecY translocase BGM07_024030 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BGM07_024035 PF00327 Ribosomal protein L30p/L7e BGM07_024040 PF00333 Ribosomal protein S5, N-terminal domain BGM07_024040 PF03719 Ribosomal protein S5, C-terminal domain BGM07_024045 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BGM07_024050 PF00347 Ribosomal protein L6 BGM07_024055 PF00410 Ribosomal protein S8 BGM07_024060 PF00253 Ribosomal protein S14p/S29e BGM07_024065 PF00281 Ribosomal protein L5 BGM07_024065 PF00673 ribosomal L5P family C-terminus BGM07_024070 PF00467 KOW motif BGM07_024070 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BGM07_024075 PF00238 Ribosomal protein L14p/L23e BGM07_024080 PF00366 Ribosomal protein S17 BGM07_024085 PF00831 Ribosomal L29 protein BGM07_024090 PF00252 Ribosomal protein L16p/L10e BGM07_024095 PF00189 Ribosomal protein S3, C-terminal domain BGM07_024095 PF07650 KH domain BGM07_024100 PF00237 Ribosomal protein L22p/L17e BGM07_024105 PF00203 Ribosomal protein S19 BGM07_024110 PF00181 Ribosomal Proteins L2, RNA binding domain BGM07_024110 PF03947 Ribosomal Proteins L2, C-terminal domain BGM07_024115 PF00276 Ribosomal protein L23 BGM07_024120 PF00573 Ribosomal protein L4/L1 family BGM07_024125 PF00297 Ribosomal protein L3 BGM07_024130 PF00338 Ribosomal protein S10p/S20e BGM07_024135 PF01197 Ribosomal protein L31 BGM07_024140 PF00270 DEAD/DEAH box helicase BGM07_024140 PF17764 3′ DNA-binding domain (3′BD) BGM07_024140 PF18074 Primosomal protein N C-terminal domain BGM07_024140 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BGM07_024140 PF00271 Helicase conserved C-terminal domain BGM07_024145 PF00356 Bacterial regulatory proteins, lacI family BGM07_024155 PF00227 Proteasome subunit BGM07_024160 PF07724 AAA domain (Cdc48 subfamily) BGM07_024160 PF00004 ATPase family associated with various cellular activities (AAA) BGM07_024165 PF01040 UbiA prenyltransferase family BGM07_024170 PF03737 Aldolase/RraA BGM07_024175 PF06005 Cell division protein ZapB BGM07_024180 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BGM07_024185 PF08220 DeoR-like helix-turn-helix domain BGM07_024185 PF00455 DeoR C terminal sensor domain BGM07_024205 PF00121 Triosephosphate isomerase BGM07_024210 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BGM07_024210 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BGM07_024210 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BGM07_024220 PF02719 Polysaccharide biosynthesis protein BGM07_024225 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BGM07_024235 PF02397 Bacterial sugar transferase BGM07_024250 PF13439 Glycosyltransferase Family 4 BGM07_024250 PF00534 Glycosyl transferases group 1 BGM07_024270 PF00132 Bacterial transferase hexapeptide (six repeats) BGM07_024270 PF12804 MobA-like NTP transferase domain BGM07_024270 PF14602 Hexapeptide repeat of succinyl-transferase BGM07_024275 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BGM07_024275 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BGM07_024275 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BGM07_024280 PF02350 UDP-N-acetylglucosamine 2-epimerase BGM07_024285 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BGM07_024285 PF00753 Metallo-beta-lactamase superfamily BGM07_024285 PF10996 Beta-Casp domain BGM07_024295 PF10531 SLBB domain BGM07_024295 PF02563 Polysaccharide biosynthesis/export protein BGM07_024310 PF02350 UDP-N-acetylglucosamine 2-epimerase BGM07_024315 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BGM07_024315 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BGM07_024315 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BGM07_024320 PF13439 Glycosyltransferase Family 4 BGM07_024320 PF00534 Glycosyl transferases group 1 BGM07_024340 PF00005 ABC transporter BGM07_024345 PF00953 Glycosyl transferase family 4 BGM07_024355 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF BGM07_024365 PF06082 Exopolysaccharide biosynthesis protein YbjH BGM07_024370 PF01370 NAD dependent epimerase/dehydratase family BGM07_024375 PF03279 Bacterial lipid A biosynthesis acyltransferase BGM07_024380 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BGM07_024385 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BGM07_024385 PF00534 Glycosyl transferases group 1 BGM07_024390 PF07922 Glycosyltransferase family 52 BGM07_024395 PF02348 Cytidylyltransferase BGM07_024400 PF00483 Nucleotidyl transferase BGM07_024410 PF03102 NeuB family BGM07_024410 PF08666 SAF domain BGM07_024415 PF02350 UDP-N-acetylglucosamine 2-epimerase BGM07_024420 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BGM07_024425 PF02719 Polysaccharide biosynthesis protein BGM07_024435 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BGM07_024440 PF00501 AMP-binding enzyme BGM07_024440 PF13193 AMP-binding enzyme C-terminal domain BGM07_024445 PF00106 short chain dehydrogenase BGM07_024465 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BGM07_024465 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BGM07_024475 PF00483 Nucleotidyl transferase BGM07_024480 PF16363 GDP-mannose 4,6 dehydratase BGM07_024490 PF01219 Prokaryotic diacylglycerol kinase BGM07_024495 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BGM07_024500 PF00535 Glycosyl transferase family 2 BGM07_024505 PF00535 Glycosyl transferase family 2 BGM07_024510 PF01467 Cytidylyltransferase-like BGM07_024515 PF05686 Glycosyl transferase family 90 BGM07_024525 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BGM07_024525 PF06827 Zinc finger found in FPG and IleRS BGM07_024525 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BGM07_024535 PF00471 Ribosomal protein L33 BGM07_024540 PF00830 Ribosomal L28 family BGM07_024545 PF04002 RadC-like JAB domain BGM07_024550 PF17200 Single Cache domain 2 BGM07_024550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BGM07_024550 PF00672 HAMP domain BGM07_024560 PF04127 DNA / pantothenate metabolism flavoprotein BGM07_024560 PF02441 Flavoprotein BGM07_024565 PF00440 Bacterial regulatory proteins, tetR family BGM07_024570 PF03279 Bacterial lipid A biosynthesis acyltransferase BGM07_024575 PF00156 Phosphoribosyl transferase domain BGM07_024580 PF03725 3' exoribonuclease family, domain 2 BGM07_024580 PF01138 3' exoribonuclease family, domain 1 BGM07_024585 PF03755 YicC-like family, N-terminal region BGM07_024585 PF08340 Domain of unknown function (DUF1732) BGM07_024595 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BGM07_024595 PF00005 ABC transporter BGM07_024600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BGM07_024600 PF00005 ABC transporter BGM07_024605 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BGM07_024610 PF00528 Binding-protein-dependent transport system inner membrane component BGM07_024610 PF12911 N-terminal TM domain of oligopeptide transport permease C BGM07_024615 PF00528 Binding-protein-dependent transport system inner membrane component BGM07_024625 PF00593 TonB dependent receptor BGM07_024625 PF07715 TonB-dependent Receptor Plug Domain BGM07_024640 PF01618 MotA/TolQ/ExbB proton channel family BGM07_024645 PF02472 Biopolymer transport protein ExbD/TolR BGM07_024660 PF00625 Guanylate kinase BGM07_024665 PF01192 RNA polymerase Rpb6 BGM07_024670 PF02824 TGS domain BGM07_024670 PF04607 Region found in RelA / SpoT proteins BGM07_024670 PF13291 ACT domain BGM07_024675 PF12105 SpoU, rRNA methylase, C-terminal BGM07_024675 PF00588 SpoU rRNA Methylase family BGM07_024680 PF17191 RecG wedge domain BGM07_024680 PF00271 Helicase conserved C-terminal domain BGM07_024680 PF00270 DEAD/DEAH box helicase BGM07_024690 PF00860 Permease family BGM07_024695 PF00512 His Kinase A (phospho-acceptor) domain BGM07_024695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_024695 PF00672 HAMP domain BGM07_024700 PF00486 Transcriptional regulatory protein, C terminal BGM07_024700 PF00072 Response regulator receiver domain BGM07_024710 PF03449 Transcription elongation factor, N-terminal BGM07_024710 PF01272 Transcription elongation factor, GreA/GreB, C-term BGM07_024720 PF16921 Tex protein YqgF-like domain BGM07_024720 PF00575 S1 RNA binding domain BGM07_024720 PF17674 HHH domain BGM07_024720 PF09371 Tex-like protein N-terminal domain BGM07_024730 PF00561 alpha/beta hydrolase fold BGM07_024735 PF00156 Phosphoribosyl transferase domain BGM07_024740 PF01521 Iron-sulphur cluster biosynthesis BGM07_024740 PF01106 NifU-like domain BGM07_024745 PF00293 NUDIX domain BGM07_024750 PF00459 Inositol monophosphatase family BGM07_024755 PF01203 Type II secretion system (T2SS), protein N BGM07_024760 PF04612 Type II secretion system (T2SS), protein M BGM07_024765 PF05134 Type II secretion system (T2SS), protein L BGM07_024765 PF12693 GspL periplasmic domain BGM07_024770 PF03934 Type II secretion system (T2SS), protein K BGM07_024775 PF11612 Type II secretion system (T2SS), protein J BGM07_024775 PF07963 Prokaryotic N-terminal methylation motif BGM07_024780 PF07963 Prokaryotic N-terminal methylation motif BGM07_024780 PF02501 Type II secretion system (T2SS), protein I BGM07_024785 PF12019 Type II transport protein GspH BGM07_024790 PF07963 Prokaryotic N-terminal methylation motif BGM07_024790 PF08334 Type II secretion system (T2SS), protein G BGM07_024795 PF00482 Type II secretion system (T2SS), protein F BGM07_024800 PF00437 Type II/IV secretion system protein BGM07_024805 PF03958 Bacterial type II/III secretion system short domain BGM07_024805 PF00263 Bacterial type II and III secretion system protein BGM07_024810 PF11356 Type II secretion system protein C BGM07_024815 PF01479 S4 domain BGM07_024820 PF01430 Hsp33 protein BGM07_024825 PF01293 Phosphoenolpyruvate carboxykinase BGM07_024835 PF09500 Putative thioesterase (yiiD_Cterm) BGM07_024835 PF00583 Acetyltransferase (GNAT) family BGM07_024840 PF02580 D-Tyr-tRNA(Tyr) deacylase BGM07_024845 PF03631 Virulence factor BrkB BGM07_024870 PF00120 Glutamine synthetase, catalytic domain BGM07_024870 PF03951 Glutamine synthetase, beta-Grasp domain BGM07_024880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BGM07_024880 PF00989 PAS fold BGM07_024880 PF00512 His Kinase A (phospho-acceptor) domain BGM07_024885 PF00158 Sigma-54 interaction domain BGM07_024885 PF00072 Response regulator receiver domain BGM07_024885 PF02954 Bacterial regulatory protein, Fis family BGM07_024890 PF00563 EAL domain BGM07_024890 PF00990 Diguanylate cyclase, GGDEF domain BGM07_024890 PF03707 Bacterial signalling protein N terminal repeat BGM07_024895 PF00962 Adenosine/AMP deaminase BGM07_024900 PF04055 Radical SAM superfamily BGM07_024900 PF06969 HemN C-terminal domain BGM07_024905 PF10675 Protein of unknown function (DUF2489) BGM07_024910 PF04220 Der GTPase activator (YihI) BGM07_024930 PF00034 Cytochrome c BGM07_024935 PF01926 50S ribosome-binding GTPase BGM07_024945 PF01612 3'-5' exonuclease BGM07_024945 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BGM07_024945 PF01367 5'-3' exonuclease, C-terminal SAM fold BGM07_024945 PF00476 DNA polymerase family A BGM07_024960 PF00490 Delta-aminolevulinic acid dehydratase BGM07_024970 PF01026 TatD related DNase BGM07_024980 PF00902 Sec-independent protein translocase protein (TatC) BGM07_024985 PF02416 mttA/Hcf106 family BGM07_024990 PF02416 mttA/Hcf106 family BGM07_024995 PF03109 ABC1 family BGM07_025000 PF02036 SCP-2 sterol transfer family BGM07_025005 PF01209 ubiE/COQ5 methyltransferase family BGM07_025010 PF02646 RmuC family BGM07_025020 PF00990 Diguanylate cyclase, GGDEF domain BGM07_025020 PF00563 EAL domain BGM07_025020 PF03707 Bacterial signalling protein N terminal repeat BGM07_025025 PF01594 AI-2E family transporter BGM07_025055 PF00781 Diacylglycerol kinase catalytic domain BGM07_025075 PF04972 BON domain BGM07_025080 PF00158 Sigma-54 interaction domain BGM07_025080 PF01590 GAF domain BGM07_025080 PF02954 Bacterial regulatory protein, Fis family BGM07_025090 PF10625 Universal stress protein B (UspB) BGM07_025095 PF00210 Ferritin-like domain BGM07_025100 PF00582 Universal stress protein family BGM07_025105 PF00892 EamA-like transporter family BGM07_025115 PF04445 Putative SAM-dependent methyltransferase BGM07_025120 PF00563 EAL domain BGM07_025120 PF00990 Diguanylate cyclase, GGDEF domain BGM07_025120 PF08448 PAS fold BGM07_025125 PF01037 Lrp/AsnC ligand binding domain BGM07_025130 PF01432 Peptidase family M3 BGM07_025135 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ BGM07_025140 PF07992 Pyridine nucleotide-disulphide oxidoreductase BGM07_025140 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BGM07_025145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_025145 PF03466 LysR substrate binding domain BGM07_025150 PF01048 Phosphorylase superfamily BGM07_025155 PF01081 KDPG and KHG aldolase BGM07_025160 PF02447 GntP family permease BGM07_025165 PF01202 Shikimate kinase BGM07_025170 PF00920 Dehydratase family BGM07_025175 PF00893 Small Multidrug Resistance protein BGM07_025180 PF00893 Small Multidrug Resistance protein BGM07_025185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_025185 PF03466 LysR substrate binding domain BGM07_025190 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BGM07_025190 PF00356 Bacterial regulatory proteins, lacI family BGM07_025195 PF00069 Protein kinase domain BGM07_025225 PF12911 N-terminal TM domain of oligopeptide transport permease C BGM07_025225 PF00528 Binding-protein-dependent transport system inner membrane component BGM07_025235 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BGM07_025240 PF00005 ABC transporter BGM07_025240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BGM07_025255 PF13419 Haloacid dehalogenase-like hydrolase BGM07_025290 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BGM07_025295 PF13361 UvrD-like helicase C-terminal domain BGM07_025295 PF00580 UvrD/REP helicase N-terminal domain BGM07_025300 PF00440 Bacterial regulatory proteins, tetR family BGM07_025300 PF16295 Tetracyclin repressor-like, C-terminal domain BGM07_025305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BGM07_025310 PF00873 AcrB/AcrD/AcrF family BGM07_025320 PF04380 Membrane fusogenic activity BGM07_025325 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BGM07_025325 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BGM07_025330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_025330 PF03466 LysR substrate binding domain BGM07_025375 PF00132 Bacterial transferase hexapeptide (six repeats) BGM07_025380 PF07369 Protein of unknown function (DUF1488) BGM07_025385 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BGM07_025385 PF01488 Shikimate / quinate 5-dehydrogenase BGM07_025385 PF08501 Shikimate dehydrogenase substrate binding domain BGM07_025390 PF01218 Coproporphyrinogen III oxidase BGM07_025395 PF01300 Telomere recombination BGM07_025400 PF00731 AIR carboxylase BGM07_025405 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BGM07_025405 PF02222 ATP-grasp domain BGM07_025410 PF01396 Topoisomerase DNA binding C4 zinc finger BGM07_025415 PF04361 Protein of unknown function (DUF494) BGM07_025420 PF17782 DprA winged helix domain BGM07_025420 PF02481 DNA recombination-mediator protein A BGM07_025430 PF01327 Polypeptide deformylase BGM07_025435 PF02911 Formyl transferase, C-terminal domain BGM07_025435 PF00551 Formyl transferase BGM07_025440 PF01189 16S rRNA methyltransferase RsmB/F BGM07_025440 PF01029 NusB family BGM07_025445 PF02254 TrkA-N domain BGM07_025445 PF02080 TrkA-C domain BGM07_025450 PF02386 Cation transport protein BGM07_025460 PF03006 Haemolysin-III related BGM07_025465 PF07070 SpoOM protein BGM07_025475 PF06288 Protein of unknown function (DUF1040) BGM07_025480 PF12801 4Fe-4S binding domain BGM07_025480 PF13746 4Fe-4S dicluster domain BGM07_025480 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase BGM07_025485 PF01636 Phosphotransferase enzyme family BGM07_025490 PF01323 DSBA-like thioredoxin domain BGM07_025495 PF01553 Acyltransferase BGM07_025505 PF13335 Magnesium chelatase, subunit ChlI C-terminal BGM07_025505 PF01078 Magnesium chelatase, subunit ChlI BGM07_025510 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BGM07_025510 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BGM07_025510 PF00205 Thiamine pyrophosphate enzyme, central domain BGM07_025520 PF01063 Amino-transferase class IV BGM07_025525 PF00920 Dehydratase family BGM07_025530 PF00585 C-terminal regulatory domain of Threonine dehydratase BGM07_025530 PF00291 Pyridoxal-phosphate dependent enzyme BGM07_025535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BGM07_025535 PF03466 LysR substrate binding domain BGM07_025540 PF07690 Major Facilitator Superfamily BGM07_025545 PF00497 Bacterial extracellular solute-binding proteins, family 3 BGM07_025550 PF00528 Binding-protein-dependent transport system inner membrane component BGM07_025555 PF00132 Bacterial transferase hexapeptide (six repeats) BGM07_025555 PF12804 MobA-like NTP transferase domain BGM07_025560 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BGM07_025560 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BGM07_025565 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BGM07_025565 PF02874 ATP synthase alpha/beta family, beta-barrel domain BGM07_025570 PF00231 ATP synthase BGM07_025575 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BGM07_025575 PF00306 ATP synthase alpha/beta chain, C terminal domain BGM07_025575 PF02874 ATP synthase alpha/beta family, beta-barrel domain BGM07_025580 PF00213 ATP synthase delta (OSCP) subunit BGM07_025585 PF00430 ATP synthase B/B' CF(0) BGM07_025590 PF00137 ATP synthase subunit C BGM07_025595 PF00119 ATP synthase A chain BGM07_025600 PF03899 ATP synthase I chain BGM07_025605 PF02195 ParB-like nuclease domain BGM07_025605 PF17762 HTH domain found in ParB protein BGM07_025610 PF13614 AAA domain BGM07_025615 PF02527 rRNA small subunit methyltransferase G BGM07_025620 PF01134 Glucose inhibited division protein A BGM07_025620 PF13932 GidA associated domain