locus-tag class description M636_00045 PF10928 Protein of unknown function (DUF2810) M636_00050 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M636_00050 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M636_00060 PF03009 Glycerophosphoryl diester phosphodiesterase family M636_00070 PF00072 Response regulator receiver domain M636_00070 PF00486 Transcriptional regulatory protein, C terminal M636_00075 PF00672 HAMP domain M636_00075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_00075 PF00512 His Kinase A (phospho-acceptor) domain M636_00075 PF16750 Sensor domain of 2-component histidine kinase M636_00080 PF00593 TonB dependent receptor M636_00080 PF07715 TonB-dependent Receptor Plug Domain M636_00090 PF01618 MotA/TolQ/ExbB proton channel family M636_00095 PF01618 MotA/TolQ/ExbB proton channel family M636_00100 PF02472 Biopolymer transport protein ExbD/TolR M636_00140 PF01297 Zinc-uptake complex component A periplasmic M636_00145 PF00005 ABC transporter M636_00150 PF00950 ABC 3 transport family M636_00165 PF00326 Prolyl oligopeptidase family M636_00165 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain M636_00170 PF07690 Major Facilitator Superfamily M636_00175 PF00491 Arginase family M636_00180 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M636_00180 PF17944 Arginine decarboxylase C-terminal helical extension M636_00180 PF17810 Arginine decarboxylase helical bundle domain M636_00185 PF00753 Metallo-beta-lactamase superfamily M636_00190 PF08443 RimK-like ATP-grasp domain M636_00190 PF18030 RimK PreATP-grasp domain M636_00195 PF08443 RimK-like ATP-grasp domain M636_00195 PF18030 RimK PreATP-grasp domain M636_00205 PF03466 LysR substrate binding domain M636_00205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_00235 PF00232 Glycosyl hydrolase family 1 M636_00245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_00245 PF02743 Cache domain M636_00245 PF00512 His Kinase A (phospho-acceptor) domain M636_00250 PF02954 Bacterial regulatory protein, Fis family M636_00250 PF00072 Response regulator receiver domain M636_00250 PF00158 Sigma-54 interaction domain M636_00255 PF00990 Diguanylate cyclase, GGDEF domain M636_00255 PF05230 MASE2 domain M636_00260 PF05525 Branched-chain amino acid transport protein M636_00280 PF01266 FAD dependent oxidoreductase M636_00290 PF01212 Beta-eliminating lyase M636_00310 PF07662 Na+ dependent nucleoside transporter C-terminus M636_00310 PF01773 Na+ dependent nucleoside transporter N-terminus M636_00310 PF07670 Nucleoside recognition M636_00320 PF13532 2OG-Fe(II) oxygenase superfamily M636_00325 PF00990 Diguanylate cyclase, GGDEF domain M636_00325 PF05230 MASE2 domain M636_00330 PF00672 HAMP domain M636_00330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M636_00330 PF12729 Four helix bundle sensory module for signal transduction M636_00345 PF00990 Diguanylate cyclase, GGDEF domain M636_00350 PF00875 DNA photolyase M636_00350 PF03441 FAD binding domain of DNA photolyase M636_00355 PF04244 Deoxyribodipyrimidine photo-lyase-related protein M636_00370 PF01641 SelR domain M636_00370 PF01625 Peptide methionine sulfoxide reductase M636_00375 PF02566 OsmC-like protein M636_00380 PF14602 Hexapeptide repeat of succinyl-transferase M636_00380 PF12464 Maltose acetyltransferase M636_00415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_00415 PF03466 LysR substrate binding domain M636_00420 PF13419 Haloacid dehalogenase-like hydrolase M636_00435 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) M636_00440 PF00194 Eukaryotic-type carbonic anhydrase M636_00445 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) M636_00450 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M636_00455 PF00005 ABC transporter M636_00455 PF02687 FtsX-like permease family M636_00455 PF12704 MacB-like periplasmic core domain M636_00460 PF02321 Outer membrane efflux protein M636_00465 PF00657 GDSL-like Lipase/Acylhydrolase M636_00480 PF03611 PTS system sugar-specific permease component M636_00490 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M636_00495 PF00356 Bacterial regulatory proteins, lacI family M636_00500 PF13419 Haloacid dehalogenase-like hydrolase M636_00510 PF00266 Aminotransferase class-V M636_00525 PF00005 ABC transporter M636_00530 PF00528 Binding-protein-dependent transport system inner membrane component M636_00535 PF00392 Bacterial regulatory proteins, gntR family M636_00535 PF07702 UTRA domain M636_00550 PF04393 Protein of unknown function (DUF535) M636_00555 PF01266 FAD dependent oxidoreductase M636_00560 PF00246 Zinc carboxypeptidase M636_00560 PF18027 Cytosolic carboxypeptidase N-terminal domain M636_00565 PF00691 OmpA family M636_00565 PF01389 OmpA-like transmembrane domain M636_00570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_00570 PF03466 LysR substrate binding domain M636_00580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_00580 PF03466 LysR substrate binding domain M636_00590 PF00854 POT family M636_00595 PF03313 Serine dehydratase alpha chain M636_00595 PF03315 Serine dehydratase beta chain M636_00615 PF00133 tRNA synthetases class I (I, L, M and V) M636_00615 PF08264 Anticodon-binding domain of tRNA M636_00620 PF01464 Transglycosylase SLT domain M636_00640 PF00460 Flagella basal body rod protein M636_00645 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M636_00645 PF00460 Flagella basal body rod protein M636_00650 PF13860 FlgD Ig-like domain M636_00650 PF13861 FlgD Tudor-like domain M636_00650 PF03963 Flagellar hook capping protein - N-terminal region M636_00655 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M636_00655 PF00460 Flagella basal body rod protein M636_00655 PF07559 Flagellar basal body protein FlaE M636_00660 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M636_00660 PF00460 Flagella basal body rod protein M636_00665 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M636_00665 PF00460 Flagella basal body rod protein M636_00670 PF02107 Flagellar L-ring protein M636_00675 PF02119 Flagellar P-ring protein M636_00680 PF10135 Rod binding protein M636_00680 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase M636_00685 PF00460 Flagella basal body rod protein M636_00685 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M636_00690 PF00669 Bacterial flagellin N-terminal helical region M636_00710 PF01070 FMN-dependent dehydrogenase M636_00740 PF00581 Rhodanese-like domain M636_00745 PF00166 Chaperonin 10 Kd subunit M636_00750 PF00118 TCP-1/cpn60 chaperonin family M636_00760 PF01810 LysE type translocator M636_00765 PF03466 LysR substrate binding domain M636_00765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_00780 PF00440 Bacterial regulatory proteins, tetR family M636_00780 PF08359 YsiA-like protein, C-terminal region M636_00790 PF00149 Calcineurin-like phosphoesterase M636_00790 PF02872 5'-nucleotidase, C-terminal domain M636_00795 PF03060 Nitronate monooxygenase M636_00810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_00810 PF03466 LysR substrate binding domain M636_00820 PF01641 SelR domain M636_00820 PF01625 Peptide methionine sulfoxide reductase M636_00825 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M636_00830 PF00455 DeoR C terminal sensor domain M636_00830 PF08220 DeoR-like helix-turn-helix domain M636_00840 PF00199 Catalase M636_00840 PF06628 Catalase-related immune-responsive M636_00850 PF00857 Isochorismatase family M636_00860 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M636_00860 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain M636_00890 PF03466 LysR substrate binding domain M636_00890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_00895 PF00691 OmpA family M636_00895 PF01389 OmpA-like transmembrane domain M636_00905 PF06629 MltA-interacting protein MipA M636_00910 PF04170 NlpE N-terminal domain M636_00910 PF17185 NlpE C-terminal OB domain M636_00915 PF02001 Protein of unknown function DUF134 M636_00940 PF03144 Elongation factor Tu domain 2 M636_00940 PF14492 Elongation Factor G, domain II M636_00940 PF00679 Elongation factor G C-terminus M636_00940 PF03764 Elongation factor G, domain IV M636_00940 PF00009 Elongation factor Tu GTP binding domain M636_00945 PF13378 Enolase C-terminal domain-like M636_00945 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M636_00955 PF03466 LysR substrate binding domain M636_00955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_00970 PF00376 MerR family regulatory protein M636_00970 PF09278 MerR, DNA binding M636_00995 PF13091 PLD-like domain M636_01000 PF13533 Biotin-lipoyl like M636_01005 PF00873 AcrB/AcrD/AcrF family M636_01040 PF00005 ABC transporter M636_01040 PF08402 TOBE domain M636_01065 PF00392 Bacterial regulatory proteins, gntR family M636_01065 PF07702 UTRA domain M636_01070 PF02028 BCCT, betaine/carnitine/choline family transporter M636_01075 PF02836 Glycosyl hydrolases family 2, TIM barrel domain M636_01075 PF02837 Glycosyl hydrolases family 2, sugar binding domain M636_01075 PF00703 Glycosyl hydrolases family 2 M636_01075 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 M636_01080 PF00196 Bacterial regulatory proteins, luxR family M636_01090 PF07694 5TMR of 5TMR-LYT M636_01090 PF00990 Diguanylate cyclase, GGDEF domain M636_01105 PF00873 AcrB/AcrD/AcrF family M636_01110 PF13533 Biotin-lipoyl like M636_01115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_01115 PF03466 LysR substrate binding domain M636_01125 PF13416 Bacterial extracellular solute-binding protein M636_01130 PF00579 tRNA synthetases class I (W and Y) M636_01145 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain M636_01145 PF00391 PEP-utilising enzyme, mobile domain M636_01145 PF02896 PEP-utilising enzyme, TIM barrel domain M636_01150 PF03618 Kinase/pyrophosphorylase M636_01155 PF17763 Glutaminase/Asparaginase C-terminal domain M636_01155 PF00710 Asparaginase, N-terminal M636_01165 PF03466 LysR substrate binding domain M636_01165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_01180 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) M636_01190 PF12833 Helix-turn-helix domain M636_01190 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term M636_01205 PF08240 Alcohol dehydrogenase GroES-like domain M636_01205 PF00107 Zinc-binding dehydrogenase M636_01210 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M636_01220 PF03466 LysR substrate binding domain M636_01220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_01225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_01225 PF03466 LysR substrate binding domain M636_01235 PF00271 Helicase conserved C-terminal domain M636_01235 PF00270 DEAD/DEAH box helicase M636_01250 PF00535 Glycosyl transferase family 2 M636_01275 PF00155 Aminotransferase class I and II M636_01280 PF12833 Helix-turn-helix domain M636_01280 PF01497 Periplasmic binding protein M636_01310 PF05661 Protein of unknown function (DUF808) M636_01315 PF01979 Amidohydrolase family M636_01320 PF01679 Proteolipid membrane potential modulator M636_01325 PF00111 2Fe-2S iron-sulfur cluster binding domain M636_01325 PF03473 MOSC domain M636_01325 PF03476 MOSC N-terminal beta barrel domain M636_01325 PF03473 MOSC domain M636_01325 PF03476 MOSC N-terminal beta barrel domain M636_01325 PF00111 2Fe-2S iron-sulfur cluster binding domain M636_01330 PF02540 NAD synthase M636_01335 PF01467 Cytidylyltransferase-like M636_01375 PF00005 ABC transporter M636_01380 PF01032 FecCD transport family M636_01390 PF02472 Biopolymer transport protein ExbD/TolR M636_01395 PF01618 MotA/TolQ/ExbB proton channel family M636_01400 PF03544 Gram-negative bacterial TonB protein C-terminal M636_01405 PF04055 Radical SAM superfamily M636_01410 PF06228 Haem utilisation ChuX/HutX M636_01415 PF01243 Pyridoxamine 5'-phosphate oxidase M636_01425 PF01584 CheW-like domain M636_01425 PF00072 Response regulator receiver domain M636_01440 PF03466 LysR substrate binding domain M636_01440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_01445 PF07690 Major Facilitator Superfamily M636_01455 PF12852 Cupin M636_01455 PF12833 Helix-turn-helix domain M636_01460 PF01588 Putative tRNA binding domain M636_01465 PF00082 Subtilase family M636_01485 PF00141 Peroxidase M636_01490 PF00210 Ferritin-like domain M636_01500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_01500 PF03466 LysR substrate binding domain M636_01520 PF08453 Peptidase family M9 N-terminal M636_01520 PF04151 Bacterial pre-peptidase C-terminal domain M636_01520 PF01752 Collagenase M636_01530 PF00128 Alpha amylase, catalytic domain M636_01545 PF00999 Sodium/hydrogen exchanger family M636_01545 PF02254 TrkA-N domain M636_01550 PF02525 Flavodoxin-like fold M636_01555 PF00582 Universal stress protein family M636_01560 PF12848 ABC transporter M636_01560 PF16326 ABC transporter C-terminal domain M636_01560 PF00005 ABC transporter M636_01565 PF00326 Prolyl oligopeptidase family M636_01565 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain M636_01580 PF13533 Biotin-lipoyl like M636_01585 PF00873 AcrB/AcrD/AcrF family M636_01590 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) M636_01600 PF13302 Acetyltransferase (GNAT) domain M636_01610 PF13185 GAF domain M636_01610 PF00990 Diguanylate cyclase, GGDEF domain M636_01635 PF00873 AcrB/AcrD/AcrF family M636_01655 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M636_01655 PF12838 4Fe-4S dicluster domain M636_01655 PF00384 Molybdopterin oxidoreductase M636_01655 PF01568 Molydopterin dinucleotide binding domain M636_01655 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M636_01675 PF00005 ABC transporter M636_01690 PF00672 HAMP domain M636_01690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M636_01695 PF10282 Lactonase, 7-bladed beta-propeller M636_01700 PF02567 Phenazine biosynthesis-like protein M636_01705 PF01161 Phosphatidylethanolamine-binding protein M636_01715 PF01758 Sodium Bile acid symporter family M636_01735 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M636_01740 PF02378 Phosphotransferase system, EIIC M636_01740 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M636_01745 PF00107 Zinc-binding dehydrogenase M636_01745 PF08240 Alcohol dehydrogenase GroES-like domain M636_01780 PF03222 Tryptophan/tyrosine permease family M636_01790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M636_01790 PF00672 HAMP domain M636_01790 PF02743 Cache domain M636_01815 PF01476 LysM domain M636_01815 PF08525 Opacity-associated protein A N-terminal motif M636_01815 PF01551 Peptidase family M23 M636_01820 PF08447 PAS fold M636_01820 PF00990 Diguanylate cyclase, GGDEF domain M636_01820 PF00563 EAL domain M636_01820 PF08448 PAS fold M636_01825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_01825 PF03466 LysR substrate binding domain M636_01830 PF07690 Major Facilitator Superfamily M636_01845 PF00462 Glutaredoxin M636_01850 PF00892 EamA-like transporter family M636_01855 PF00267 Gram-negative porin M636_01865 PF01557 Fumarylacetoacetate (FAA) hydrolase family M636_01880 PF12833 Helix-turn-helix domain M636_01885 PF01810 LysE type translocator M636_01895 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M636_01895 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M636_01895 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M636_01895 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M636_01900 PF02790 Cytochrome C oxidase subunit II, transmembrane domain M636_01900 PF00116 Cytochrome C oxidase subunit II, periplasmic domain M636_01905 PF00115 Cytochrome C and Quinol oxidase polypeptide I M636_01910 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 M636_01915 PF00510 Cytochrome c oxidase subunit III M636_01935 PF02628 Cytochrome oxidase assembly protein M636_01940 PF01040 UbiA prenyltransferase family M636_01945 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M636_01945 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M636_01975 PF00313 'Cold-shock' DNA-binding domain M636_01985 PF03889 Alternative ribosome-rescue factor A M636_01990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M636_01990 PF08447 PAS fold M636_01990 PF13426 PAS domain M636_01995 PF00990 Diguanylate cyclase, GGDEF domain M636_02010 PF00005 ABC transporter M636_02010 PF02687 FtsX-like permease family M636_02010 PF12704 MacB-like periplasmic core domain M636_02015 PF12704 MacB-like periplasmic core domain M636_02015 PF02687 FtsX-like permease family M636_02015 PF00005 ABC transporter M636_02030 PF00672 HAMP domain M636_02030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M636_02030 PF17200 Single Cache domain 2 M636_02035 PF00210 Ferritin-like domain M636_02045 PF07995 Glucose / Sorbosone dehydrogenase M636_02050 PF00465 Iron-containing alcohol dehydrogenase M636_02065 PF00892 EamA-like transporter family M636_02090 PF03466 LysR substrate binding domain M636_02090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_02100 PF13193 AMP-binding enzyme C-terminal domain M636_02100 PF00501 AMP-binding enzyme M636_02105 PF00351 Biopterin-dependent aromatic amino acid hydroxylase M636_02110 PF01329 Pterin 4 alpha carbinolamine dehydratase M636_02130 PF12843 Putative quorum-sensing-regulated virulence factor M636_02135 PF00271 Helicase conserved C-terminal domain M636_02135 PF00270 DEAD/DEAH box helicase M636_02140 PF09905 DNA-binding protein VF530 M636_02145 PF00291 Pyridoxal-phosphate dependent enzyme M636_02155 PF01470 Pyroglutamyl peptidase M636_02165 PF02492 CobW/HypB/UreG, nucleotide-binding domain M636_02165 PF07683 Cobalamin synthesis protein cobW C-terminal domain M636_02170 PF00271 Helicase conserved C-terminal domain M636_02170 PF00270 DEAD/DEAH box helicase M636_02190 PF00563 EAL domain M636_02190 PF12792 CSS motif domain associated with EAL M636_02195 PF00005 ABC transporter M636_02200 PF00672 HAMP domain M636_02200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M636_02200 PF12729 Four helix bundle sensory module for signal transduction M636_02210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_02210 PF03466 LysR substrate binding domain M636_02215 PF00884 Sulfatase M636_02220 PF13186 Iron-sulfur cluster-binding domain M636_02220 PF04055 Radical SAM superfamily M636_02225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_02225 PF03466 LysR substrate binding domain M636_02240 PF12849 PBP superfamily domain M636_02250 PF12833 Helix-turn-helix domain M636_02255 PF00575 S1 RNA binding domain M636_02255 PF08206 Ribonuclease B OB domain M636_02255 PF00773 RNB domain M636_02260 PF00271 Helicase conserved C-terminal domain M636_02260 PF03880 DbpA RNA binding domain M636_02260 PF00270 DEAD/DEAH box helicase M636_02265 PF00563 EAL domain M636_02265 PF13426 PAS domain M636_02265 PF00990 Diguanylate cyclase, GGDEF domain M636_02270 PF00871 Acetokinase family M636_02275 PF13426 PAS domain M636_02275 PF08447 PAS fold M636_02275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M636_02285 PF10063 Uncharacterized integral membrane protein (DUF2301) M636_02290 PF00682 HMGL-like M636_02295 PF00378 Enoyl-CoA hydratase/isomerase M636_02300 PF01039 Carboxyl transferase domain M636_02305 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M636_02305 PF02770 Acyl-CoA dehydrogenase, middle domain M636_02305 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M636_02310 PF09278 MerR, DNA binding M636_02310 PF00376 MerR family regulatory protein M636_02315 PF02803 Thiolase, C-terminal domain M636_02315 PF00108 Thiolase, N-terminal domain M636_02320 PF00171 Aldehyde dehydrogenase family M636_02330 PF00378 Enoyl-CoA hydratase/isomerase M636_02335 PF00378 Enoyl-CoA hydratase/isomerase M636_02340 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M636_02340 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M636_02350 PF06481 COX Aromatic Rich Motif M636_02350 PF00116 Cytochrome C oxidase subunit II, periplasmic domain M636_02355 PF00115 Cytochrome C and Quinol oxidase polypeptide I M636_02360 PF00510 Cytochrome c oxidase subunit III M636_02370 PF01040 UbiA prenyltransferase family M636_02385 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M636_02390 PF01565 FAD binding domain M636_02390 PF08031 Berberine and berberine like M636_02395 PF00005 ABC transporter M636_02400 PF00497 Bacterial extracellular solute-binding proteins, family 3 M636_02405 PF00528 Binding-protein-dependent transport system inner membrane component M636_02410 PF00528 Binding-protein-dependent transport system inner membrane component M636_02420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_02420 PF03466 LysR substrate binding domain M636_02425 PF00043 Glutathione S-transferase, C-terminal domain M636_02425 PF02798 Glutathione S-transferase, N-terminal domain M636_02435 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M636_02435 PF02817 e3 binding domain M636_02435 PF00364 Biotin-requiring enzyme M636_02440 PF02779 Transketolase, pyrimidine binding domain M636_02440 PF02780 Transketolase, C-terminal domain M636_02445 PF00676 Dehydrogenase E1 component M636_02460 PF00012 Hsp70 protein M636_02465 PF04314 Copper chaperone PCu(A)C M636_02485 PF01497 Periplasmic binding protein M636_02490 PF01032 FecCD transport family M636_02495 PF01032 FecCD transport family M636_02500 PF00005 ABC transporter M636_02505 PF13411 MerR HTH family regulatory protein M636_02515 PF07715 TonB-dependent Receptor Plug Domain M636_02515 PF00593 TonB dependent receptor M636_02545 PF12805 FUSC-like inner membrane protein yccS M636_02550 PF00580 UvrD/REP helicase N-terminal domain M636_02550 PF12462 DNA helicase IV / RNA helicase N terminal M636_02550 PF13361 UvrD-like helicase C-terminal domain M636_02555 PF02142 MGS-like domain M636_02560 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M636_02565 PF00672 HAMP domain M636_02565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_02565 PF00512 His Kinase A (phospho-acceptor) domain M636_02565 PF01627 Hpt domain M636_02565 PF00072 Response regulator receiver domain M636_02580 PF00486 Transcriptional regulatory protein, C terminal M636_02580 PF00072 Response regulator receiver domain M636_02590 PF00884 Sulfatase M636_02595 PF00884 Sulfatase M636_02605 PF03466 LysR substrate binding domain M636_02605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_02610 PF00884 Sulfatase M636_02615 PF04055 Radical SAM superfamily M636_02615 PF13186 Iron-sulfur cluster-binding domain M636_02620 PF07726 ATPase family associated with various cellular activities (AAA) M636_02620 PF17863 AAA lid domain M636_02635 PF00092 von Willebrand factor type A domain M636_02650 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M636_02655 PF03466 LysR substrate binding domain M636_02655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_02660 PF00781 Diacylglycerol kinase catalytic domain M636_02665 PF04076 Bacterial OB fold (BOF) protein M636_02680 PF13186 Iron-sulfur cluster-binding domain M636_02680 PF04055 Radical SAM superfamily M636_02690 PF08774 VRR-NUC domain M636_02690 PF18081 Fanconi anemia-associated nuclease SAP domain M636_02705 PF01435 Peptidase family M48 M636_02710 PF04011 LemA family M636_02715 PF03606 C4-dicarboxylate anaerobic carrier M636_02735 PF00072 Response regulator receiver domain M636_02735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_02740 PF00155 Aminotransferase class I and II M636_02745 PF01926 50S ribosome-binding GTPase M636_02750 PF03466 LysR substrate binding domain M636_02750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_02755 PF00884 Sulfatase M636_02760 PF04055 Radical SAM superfamily M636_02760 PF13186 Iron-sulfur cluster-binding domain M636_02795 PF04002 RadC-like JAB domain M636_02810 PF12431 Transcriptional regulator M636_02810 PF00072 Response regulator receiver domain M636_02815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_02815 PF17203 Single cache domain 3 M636_02820 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit M636_02825 PF00682 HMGL-like M636_02825 PF00364 Biotin-requiring enzyme M636_02825 PF02436 Conserved carboxylase domain M636_02830 PF04277 Oxaloacetate decarboxylase, gamma chain M636_02835 PF03390 2-hydroxycarboxylate transporter family M636_02840 PF08218 Citrate lyase ligase C-terminal domain M636_02845 PF06857 Malonate decarboxylase delta subunit (MdcD) M636_02850 PF03328 HpcH/HpaI aldolase/citrate lyase family M636_02855 PF04223 Citrate lyase, alpha subunit (CitF) M636_02860 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase M636_02865 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase M636_02880 PF18500 CadC C-terminal domain 1 M636_02880 PF00486 Transcriptional regulatory protein, C terminal M636_02925 PF13181 Tetratricopeptide repeat M636_02925 PF17128 Domain of unknown function (DUF5107) M636_02930 PF00083 Sugar (and other) transporter M636_02940 PF00480 ROK family M636_02945 PF02872 5'-nucleotidase, C-terminal domain M636_02945 PF00149 Calcineurin-like phosphoesterase M636_02980 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) M636_02980 PF08463 EcoEI R protein C-terminal M636_02980 PF04851 Type III restriction enzyme, res subunit M636_02980 PF00271 Helicase conserved C-terminal domain M636_02985 PF02384 N-6 DNA Methylase M636_02990 PF01420 Type I restriction modification DNA specificity domain M636_03015 PF07728 AAA domain (dynein-related subfamily) M636_03015 PF12102 Domain of unknown function (DUF3578) M636_03025 PF00589 Phage integrase family M636_03025 PF13356 Arm DNA-binding domain M636_03035 PF08453 Peptidase family M9 N-terminal M636_03035 PF01752 Collagenase M636_03035 PF04151 Bacterial pre-peptidase C-terminal domain M636_03045 PF12833 Helix-turn-helix domain M636_03050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_03050 PF03466 LysR substrate binding domain M636_03070 PF04972 BON domain M636_03070 PF13629 Pilus formation protein N terminal region M636_03070 PF00263 Bacterial type II and III secretion system protein M636_03085 PF00437 Type II/IV secretion system protein M636_03120 PF00691 OmpA family M636_03120 PF05736 OprF membrane domain M636_03130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_03130 PF03466 LysR substrate binding domain M636_03135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_03135 PF03466 LysR substrate binding domain M636_03145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_03145 PF00512 His Kinase A (phospho-acceptor) domain M636_03145 PF00072 Response regulator receiver domain M636_03145 PF09456 RcsC Alpha-Beta-Loop (ABL) M636_03150 PF00563 EAL domain M636_03150 PF13188 PAS domain M636_03150 PF03707 Bacterial signalling protein N terminal repeat M636_03150 PF00990 Diguanylate cyclase, GGDEF domain M636_03155 PF00072 Response regulator receiver domain M636_03155 PF00196 Bacterial regulatory proteins, luxR family M636_03160 PF00990 Diguanylate cyclase, GGDEF domain M636_03170 PF00072 Response regulator receiver domain M636_03170 PF00196 Bacterial regulatory proteins, luxR family M636_03190 PF00072 Response regulator receiver domain M636_03190 PF01584 CheW-like domain M636_03205 PF00892 EamA-like transporter family M636_03220 PF01569 PAP2 superfamily M636_03235 PF00893 Small Multidrug Resistance protein M636_03240 PF00892 EamA-like transporter family M636_03260 PF00171 Aldehyde dehydrogenase family M636_03265 PF00939 Sodium:sulfate symporter transmembrane region M636_03275 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain M636_03275 PF00989 PAS fold M636_03275 PF17203 Single cache domain 3 M636_03275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_03280 PF00072 Response regulator receiver domain M636_03280 PF12431 Transcriptional regulator M636_03290 PF01645 Conserved region in glutamate synthase M636_03290 PF13187 4Fe-4S dicluster domain M636_03300 PF00141 Peroxidase M636_03315 PF01757 Acyltransferase family M636_03325 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M636_03330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M636_03350 PF00571 CBS domain M636_03350 PF01769 Divalent cation transporter M636_03350 PF03448 MgtE intracellular N domain M636_03380 PF01327 Polypeptide deformylase M636_03385 PF00376 MerR family regulatory protein M636_03385 PF09278 MerR, DNA binding M636_03395 PF02253 Phospholipase A1 M636_03415 PF00005 ABC transporter M636_03415 PF00664 ABC transporter transmembrane region M636_03420 PF00929 Exonuclease M636_03420 PF02811 PHP domain M636_03420 PF14579 Helix-hairpin-helix motif M636_03420 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M636_03420 PF07733 Bacterial DNA polymerase III alpha NTPase domain M636_03420 PF11490 DNA polymerase III polC-type N-terminus II M636_03425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_03425 PF03466 LysR substrate binding domain M636_03430 PF01039 Carboxyl transferase domain M636_03430 PF17848 Acetyl-coA carboxylase zinc finger domain M636_03435 PF01212 Beta-eliminating lyase M636_03455 PF02347 Glycine cleavage system P-protein M636_03460 PF01597 Glycine cleavage H-protein M636_03465 PF00464 Serine hydroxymethyltransferase M636_03475 PF08669 Glycine cleavage T-protein C-terminal barrel domain M636_03475 PF01571 Aminomethyltransferase folate-binding domain M636_03495 PF00873 AcrB/AcrD/AcrF family M636_03505 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M636_03505 PF02378 Phosphotransferase system, EIIC M636_03510 PF00294 pfkB family carbohydrate kinase M636_03515 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M636_03515 PF00381 PTS HPr component phosphorylation site M636_03520 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M636_03520 PF00356 Bacterial regulatory proteins, lacI family M636_03540 PF00563 EAL domain M636_03540 PF00990 Diguanylate cyclase, GGDEF domain M636_03540 PF01590 GAF domain M636_03540 PF00989 PAS fold M636_03545 PF00528 Binding-protein-dependent transport system inner membrane component M636_03550 PF00497 Bacterial extracellular solute-binding proteins, family 3 M636_03555 PF00528 Binding-protein-dependent transport system inner membrane component M636_03560 PF00005 ABC transporter M636_03565 PF00224 Pyruvate kinase, barrel domain M636_03565 PF02887 Pyruvate kinase, alpha/beta domain M636_03570 PF07690 Major Facilitator Superfamily M636_03580 PF00512 His Kinase A (phospho-acceptor) domain M636_03580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_03580 PF00672 HAMP domain M636_03585 PF14532 Sigma-54 interaction domain M636_03585 PF02954 Bacterial regulatory protein, Fis family M636_03585 PF00072 Response regulator receiver domain M636_03595 PF00465 Iron-containing alcohol dehydrogenase M636_03600 PF06719 AraC-type transcriptional regulator N-terminus M636_03600 PF12833 Helix-turn-helix domain M636_03605 PF00704 Glycosyl hydrolases family 18 M636_03605 PF06483 Chitinase C M636_03610 PF00483 Nucleotidyl transferase M636_03615 PF01268 Formate--tetrahydrofolate ligase M636_03620 PF00294 pfkB family carbohydrate kinase M636_03635 PF11849 Domain of unknown function (DUF3369) M636_03640 PF13419 Haloacid dehalogenase-like hydrolase M636_03645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M636_03655 PF04336 Acyl carrier protein phosphodiesterase M636_03660 PF00271 Helicase conserved C-terminal domain M636_03660 PF00270 DEAD/DEAH box helicase M636_03665 PF12792 CSS motif domain associated with EAL M636_03665 PF00563 EAL domain M636_03680 PF01292 Prokaryotic cytochrome b561 M636_03685 PF04264 YceI-like domain M636_03690 PF01226 Formate/nitrite transporter M636_03695 PF03466 LysR substrate binding domain M636_03695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_03700 PF06496 Protein of unknown function (DUF1097) M636_03705 PF11398 Protein of unknown function (DUF2813) M636_03710 PF02872 5'-nucleotidase, C-terminal domain M636_03710 PF00149 Calcineurin-like phosphoesterase M636_03725 PF03741 Integral membrane protein TerC family M636_03740 PF12262 Bacterial virulence factor lipase N-terminal M636_03745 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) M636_03760 PF03061 Thioesterase superfamily M636_03770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M636_03770 PF12793 Sugar transport-related sRNA regulator N-term M636_03795 PF00684 DnaJ central domain M636_03795 PF01556 DnaJ C terminal domain M636_03795 PF00226 DnaJ domain M636_03805 PF00990 Diguanylate cyclase, GGDEF domain M636_03805 PF03707 Bacterial signalling protein N terminal repeat M636_03805 PF13188 PAS domain M636_03805 PF00563 EAL domain M636_03810 PF07055 Enoyl reductase FAD binding domain M636_03810 PF12241 Trans-2-enoyl-CoA reductase catalytic region M636_03810 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase M636_03815 PF13472 GDSL-like Lipase/Acylhydrolase family M636_03820 PF00005 ABC transporter M636_03835 PF02626 Carboxyltransferase domain, subdomain A and B M636_03840 PF02682 Carboxyltransferase domain, subdomain C and D M636_03845 PF03746 LamB/YcsF family M636_03850 PF13426 PAS domain M636_03850 PF08448 PAS fold M636_03850 PF08447 PAS fold M636_03850 PF00563 EAL domain M636_03850 PF05231 MASE1 M636_03850 PF00990 Diguanylate cyclase, GGDEF domain M636_03855 PF16363 GDP-mannose 4,6 dehydratase M636_03865 PF07715 TonB-dependent Receptor Plug Domain M636_03865 PF00593 TonB dependent receptor M636_03870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_03870 PF03466 LysR substrate binding domain M636_03875 PF13607 Succinyl-CoA ligase like flavodoxin domain M636_03875 PF00583 Acetyltransferase (GNAT) family M636_03875 PF13380 CoA binding domain M636_03885 PF01820 D-ala D-ala ligase N-terminus M636_03885 PF07478 D-ala D-ala ligase C-terminus M636_03895 PF01253 Translation initiation factor SUI1 M636_03910 PF05840 Bacteriophage replication gene A protein (GPA) M636_03950 PF00263 Bacterial type II and III secretion system protein M636_03950 PF03958 Bacterial type II/III secretion system short domain M636_03980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_03980 PF03466 LysR substrate binding domain M636_03990 PF00582 Universal stress protein family M636_03995 PF03701 Uncharacterised protein family (UPF0181) M636_04010 PF00486 Transcriptional regulatory protein, C terminal M636_04010 PF00072 Response regulator receiver domain M636_04020 PF02233 NAD(P) transhydrogenase beta subunit M636_04025 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M636_04025 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch M636_04025 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M636_04040 PF00990 Diguanylate cyclase, GGDEF domain M636_04040 PF00072 Response regulator receiver domain M636_04050 PF00990 Diguanylate cyclase, GGDEF domain M636_04050 PF00563 EAL domain M636_04050 PF01590 GAF domain M636_04050 PF00360 Phytochrome region M636_04060 PF00005 ABC transporter M636_04060 PF03459 TOBE domain M636_04065 PF00528 Binding-protein-dependent transport system inner membrane component M636_04075 PF07685 CobB/CobQ-like glutamine amidotransferase domain M636_04080 PF04076 Bacterial OB fold (BOF) protein M636_04095 PF18030 RimK PreATP-grasp domain M636_04095 PF08443 RimK-like ATP-grasp domain M636_04100 PF00155 Aminotransferase class I and II M636_04105 PF12833 Helix-turn-helix domain M636_04110 PF01554 MatE M636_04120 PF13597 Anaerobic ribonucleoside-triphosphate reductase M636_04120 PF03477 ATP cone domain M636_04130 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M636_04135 PF00873 AcrB/AcrD/AcrF family M636_04145 PF04143 Sulphur transport M636_04160 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M636_04160 PF07992 Pyridine nucleotide-disulphide oxidoreductase M636_04165 PF00384 Molybdopterin oxidoreductase M636_04170 PF03466 LysR substrate binding domain M636_04170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_04175 PF02634 FdhD/NarQ family M636_04185 PF07690 Major Facilitator Superfamily M636_04190 PF00072 Response regulator receiver domain M636_04190 PF00196 Bacterial regulatory proteins, luxR family M636_04195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_04195 PF07730 Histidine kinase M636_04195 PF05231 MASE1 M636_04200 PF07690 Major Facilitator Superfamily M636_04205 PF01238 Phosphomannose isomerase type I M636_04230 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M636_04230 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M636_04235 PF00085 Thioredoxin M636_04240 PF07690 Major Facilitator Superfamily M636_04250 PF01554 MatE M636_04255 PF11756 Nitrous oxide-stimulated promoter M636_04270 PF00593 TonB dependent receptor M636_04270 PF07715 TonB-dependent Receptor Plug Domain M636_04285 PF03605 Anaerobic c4-dicarboxylate membrane transporter M636_04300 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M636_04300 PF14824 Sirohaem biosynthesis protein central M636_04300 PF10414 Sirohaem synthase dimerisation region M636_04305 PF01226 Formate/nitrite transporter M636_04310 PF13806 Rieske-like [2Fe-2S] domain M636_04315 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M636_04315 PF07992 Pyridine nucleotide-disulphide oxidoreductase M636_04315 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M636_04315 PF18267 Rubredoxin NAD+ reductase C-terminal domain M636_04315 PF04324 BFD-like [2Fe-2S] binding domain M636_04320 PF01272 Transcription elongation factor, GreA/GreB, C-term M636_04320 PF14760 Rnk N-terminus M636_04360 PF13462 Thioredoxin M636_04360 PF06965 Na+/H+ antiporter 1 M636_04380 PF09154 Domain of unknown function (DUF1939) M636_04380 PF00128 Alpha amylase, catalytic domain M636_04395 PF00672 HAMP domain M636_04395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M636_04400 PF01168 Alanine racemase, N-terminal domain M636_04400 PF00842 Alanine racemase, C-terminal domain M636_04420 PF01565 FAD binding domain M636_04420 PF09330 D-lactate dehydrogenase, membrane binding M636_04425 PF03466 LysR substrate binding domain M636_04425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_04440 PF05762 VWA domain containing CoxE-like protein M636_04445 PF07728 AAA domain (dynein-related subfamily) M636_04445 PF17868 AAA lid domain M636_04445 PF12592 Protein of unknown function (DUF3763) M636_04455 PF01212 Beta-eliminating lyase M636_04460 PF00034 Cytochrome c M636_04465 PF03606 C4-dicarboxylate anaerobic carrier M636_04475 PF07690 Major Facilitator Superfamily M636_04485 PF08212 Lipocalin-like domain M636_04505 PF13476 AAA domain M636_04510 PF00149 Calcineurin-like phosphoesterase M636_04510 PF12320 Type 5 capsule protein repressor C-terminal domain M636_04525 PF04717 Type VI secretion system, phage-baseplate injector M636_04525 PF16671 Actin cross-linking domain M636_04535 PF10431 C-terminal, D2-small domain, of ClpB protein M636_04535 PF17871 AAA lid domain M636_04535 PF07724 AAA domain (Cdc48 subfamily) M636_04535 PF00004 ATPase family associated with various cellular activities (AAA) M636_04595 PF00691 OmpA family M636_04595 PF13677 Membrane MotB of proton-channel complex MotA/MotB M636_04620 PF03793 PASTA domain M636_04620 PF00069 Protein kinase domain M636_04650 PF08361 MAATS-type transcriptional repressor, C-terminal region M636_04650 PF00440 Bacterial regulatory proteins, tetR family M636_04665 PF04324 BFD-like [2Fe-2S] binding domain M636_04665 PF18267 Rubredoxin NAD+ reductase C-terminal domain M636_04665 PF13806 Rieske-like [2Fe-2S] domain M636_04665 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M636_04665 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M636_04665 PF07992 Pyridine nucleotide-disulphide oxidoreductase M636_04670 PF00005 ABC transporter M636_04675 PF00528 Binding-protein-dependent transport system inner membrane component M636_04680 PF00005 ABC transporter M636_04685 PF03861 ANTAR domain M636_04685 PF08376 Nitrate and nitrite sensing M636_04690 PF01738 Dienelactone hydrolase family M636_04695 PF00591 Glycosyl transferase family, a/b domain M636_04695 PF02885 Glycosyl transferase family, helical bundle domain M636_04700 PF10414 Sirohaem synthase dimerisation region M636_04700 PF14824 Sirohaem biosynthesis protein central M636_04700 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M636_04705 PF00384 Molybdopterin oxidoreductase M636_04705 PF01568 Molydopterin dinucleotide binding domain M636_04705 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M636_04710 PF00583 Acetyltransferase (GNAT) family M636_04720 PF03222 Tryptophan/tyrosine permease family M636_04730 PF00072 Response regulator receiver domain M636_04730 PF00990 Diguanylate cyclase, GGDEF domain M636_04740 PF00082 Subtilase family M636_04740 PF01483 Proprotein convertase P-domain M636_04750 PF00245 Alkaline phosphatase M636_04765 PF00486 Transcriptional regulatory protein, C terminal M636_04765 PF00072 Response regulator receiver domain M636_04785 PF01048 Phosphorylase superfamily M636_04790 PF04973 Nicotinamide mononucleotide transporter M636_04800 PF00356 Bacterial regulatory proteins, lacI family M636_04805 PF00294 pfkB family carbohydrate kinase M636_04810 PF13407 Periplasmic binding protein domain M636_04815 PF02653 Branched-chain amino acid transport system / permease component M636_04820 PF00005 ABC transporter M636_04825 PF05025 RbsD / FucU transport protein family M636_04830 PF00563 EAL domain M636_04830 PF00990 Diguanylate cyclase, GGDEF domain M636_04835 PF01048 Phosphorylase superfamily M636_04880 PF04116 Fatty acid hydroxylase superfamily M636_04895 PF00072 Response regulator receiver domain M636_04895 PF09308 LuxQ, periplasmic M636_04895 PF00512 His Kinase A (phospho-acceptor) domain M636_04895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_04900 PF03150 Di-haem cytochrome c peroxidase M636_04900 PF00034 Cytochrome c M636_04910 PF13188 PAS domain M636_04910 PF03707 Bacterial signalling protein N terminal repeat M636_04910 PF00990 Diguanylate cyclase, GGDEF domain M636_04910 PF00563 EAL domain M636_04920 PF01145 SPFH domain / Band 7 family M636_04920 PF16200 C-terminal region of band_7 M636_04930 PF00881 Nitroreductase family M636_04935 PF00005 ABC transporter M636_04935 PF00571 CBS domain M636_04940 PF00528 Binding-protein-dependent transport system inner membrane component M636_04945 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M636_04950 PF05199 GMC oxidoreductase M636_04950 PF00732 GMC oxidoreductase M636_04955 PF00171 Aldehyde dehydrogenase family M636_04960 PF00440 Bacterial regulatory proteins, tetR family M636_04960 PF13977 BetI-type transcriptional repressor, C-terminal M636_04965 PF00990 Diguanylate cyclase, GGDEF domain M636_04965 PF17151 Periplasmic sensor domain M636_04975 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M636_04975 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M636_04985 PF00378 Enoyl-CoA hydratase/isomerase M636_04990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M636_04990 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M636_04990 PF02770 Acyl-CoA dehydrogenase, middle domain M636_04995 PF00171 Aldehyde dehydrogenase family M636_05000 PF02803 Thiolase, C-terminal domain M636_05000 PF00108 Thiolase, N-terminal domain M636_05005 PF09278 MerR, DNA binding M636_05005 PF00376 MerR family regulatory protein M636_05010 PF02770 Acyl-CoA dehydrogenase, middle domain M636_05010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M636_05010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M636_05015 PF01039 Carboxyl transferase domain M636_05020 PF00378 Enoyl-CoA hydratase/isomerase M636_05025 PF00364 Biotin-requiring enzyme M636_05025 PF00289 Biotin carboxylase, N-terminal domain M636_05025 PF02785 Biotin carboxylase C-terminal domain M636_05025 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M636_05030 PF00682 HMGL-like M636_05035 PF00672 HAMP domain M636_05035 PF00072 Response regulator receiver domain M636_05035 PF01627 Hpt domain M636_05035 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M636_05035 PF00512 His Kinase A (phospho-acceptor) domain M636_05035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_05050 PF12795 Mechanosensitive ion channel porin domain M636_05050 PF12794 Mechanosensitive ion channel inner membrane domain 1 M636_05050 PF00924 Mechanosensitive ion channel M636_05055 PF14602 Hexapeptide repeat of succinyl-transferase M636_05055 PF12464 Maltose acetyltransferase M636_05060 PF00392 Bacterial regulatory proteins, gntR family M636_05060 PF00155 Aminotransferase class I and II M636_05065 PF01654 Cytochrome bd terminal oxidase subunit I M636_05070 PF02322 Cytochrome bd terminal oxidase subunit II M636_05080 PF02567 Phenazine biosynthesis-like protein M636_05085 PF02627 Carboxymuconolactone decarboxylase family M636_05090 PF13411 MerR HTH family regulatory protein M636_05100 PF00034 Cytochrome c M636_05110 PF05724 Thiopurine S-methyltransferase (TPMT) M636_05115 PF14535 AMP-binding enzyme C-terminal domain M636_05115 PF00501 AMP-binding enzyme M636_05120 PF00005 ABC transporter M636_05145 PF00005 ABC transporter M636_05145 PF12399 Branched-chain amino acid ATP-binding cassette transporter M636_05160 PF01012 Electron transfer flavoprotein domain M636_05165 PF01012 Electron transfer flavoprotein domain M636_05165 PF00766 Electron transfer flavoprotein FAD-binding domain M636_05170 PF13193 AMP-binding enzyme C-terminal domain M636_05170 PF00501 AMP-binding enzyme M636_05175 PF00478 IMP dehydrogenase / GMP reductase domain M636_05180 PF03853 YjeF-related protein N-terminus M636_05180 PF01256 Carbohydrate kinase M636_05190 PF00072 Response regulator receiver domain M636_05195 PF00248 Aldo/keto reductase family M636_05210 PF00654 Voltage gated chloride channel M636_05225 PF01566 Natural resistance-associated macrophage protein M636_05230 PF01227 GTP cyclohydrolase I M636_05235 PF00994 Probable molybdopterin binding domain M636_05235 PF03454 MoeA C-terminal region (domain IV) M636_05235 PF03453 MoeA N-terminal region (domain I and II) M636_05240 PF00899 ThiF family M636_05260 PF00581 Rhodanese-like domain M636_05265 PF00990 Diguanylate cyclase, GGDEF domain M636_05265 PF00563 EAL domain M636_05265 PF03707 Bacterial signalling protein N terminal repeat M636_05270 PF00704 Glycosyl hydrolases family 18 M636_05270 PF08329 Chitinase A, N-terminal domain M636_05290 PF00923 Transaldolase/Fructose-6-phosphate aldolase M636_05295 PF00456 Transketolase, thiamine diphosphate binding domain M636_05295 PF02780 Transketolase, C-terminal domain M636_05295 PF02779 Transketolase, pyrimidine binding domain M636_05300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M636_05300 PF08447 PAS fold M636_05305 PF07690 Major Facilitator Superfamily M636_05310 PF00793 DAHP synthetase I family M636_05315 PF00691 OmpA family M636_05315 PF01389 OmpA-like transmembrane domain M636_05320 PF13419 Haloacid dehalogenase-like hydrolase M636_05325 PF00472 RF-1 domain M636_05330 PF12729 Four helix bundle sensory module for signal transduction M636_05330 PF00672 HAMP domain M636_05330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M636_05335 PF00873 AcrB/AcrD/AcrF family M636_05340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M636_05345 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M636_05350 PF07687 Peptidase dimerisation domain M636_05350 PF01546 Peptidase family M20/M25/M40 M636_05365 PF00072 Response regulator receiver domain M636_05365 PF00196 Bacterial regulatory proteins, luxR family M636_05370 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term M636_05370 PF00672 HAMP domain M636_05370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_05370 PF07730 Histidine kinase M636_05375 PF13187 4Fe-4S dicluster domain M636_05375 PF12838 4Fe-4S dicluster domain M636_05385 PF01568 Molydopterin dinucleotide binding domain M636_05385 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M636_05385 PF00384 Molybdopterin oxidoreductase M636_05390 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) M636_05395 PF03264 NapC/NirT cytochrome c family, N-terminal region M636_05405 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus M636_05405 PF00561 alpha/beta hydrolase fold M636_05415 PF02803 Thiolase, C-terminal domain M636_05415 PF00108 Thiolase, N-terminal domain M636_05420 PF00106 short chain dehydrogenase M636_05435 PF02355 Protein export membrane protein M636_05435 PF07549 SecD/SecF GG Motif M636_05440 PF07549 SecD/SecF GG Motif M636_05440 PF02355 Protein export membrane protein M636_05440 PF13721 SecD export protein N-terminal TM region M636_05465 PF01037 Lrp/AsnC ligand binding domain M636_05485 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M636_05485 PF00529 HlyD membrane-fusion protein of T1SS M636_05495 PF00072 Response regulator receiver domain M636_05495 PF09308 LuxQ, periplasmic M636_05495 PF00512 His Kinase A (phospho-acceptor) domain M636_05495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_05500 PF13407 Periplasmic binding protein domain M636_05505 PF01541 GIY-YIG catalytic domain M636_05510 PF04337 Protein of unknown function, DUF480 M636_05520 PF04363 Protein of unknown function (DUF496) M636_05525 PF01554 MatE M636_05530 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M636_05535 PF00512 His Kinase A (phospho-acceptor) domain M636_05535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_05535 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M636_05535 PF01627 Hpt domain M636_05535 PF00072 Response regulator receiver domain M636_05535 PF00672 HAMP domain M636_05540 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M636_05540 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M636_05555 PF03466 LysR substrate binding domain M636_05555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_05560 PF01037 Lrp/AsnC ligand binding domain M636_05560 PF13404 AsnC-type helix-turn-helix domain M636_05565 PF13520 Amino acid permease M636_05570 PF00392 Bacterial regulatory proteins, gntR family M636_05570 PF00155 Aminotransferase class I and II M636_05580 PF03109 ABC1 family M636_05585 PF03448 MgtE intracellular N domain M636_05585 PF01769 Divalent cation transporter M636_05585 PF00571 CBS domain M636_05590 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin M636_05595 PF07969 Amidohydrolase family M636_05605 PF01966 HD domain M636_05620 PF07690 Major Facilitator Superfamily M636_05630 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M636_05635 PF00255 Glutathione peroxidase M636_05650 PF01323 DSBA-like thioredoxin domain M636_05665 PF00106 short chain dehydrogenase M636_05670 PF00486 Transcriptional regulatory protein, C terminal M636_05670 PF00072 Response regulator receiver domain M636_05675 PF00672 HAMP domain M636_05675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_05675 PF00512 His Kinase A (phospho-acceptor) domain M636_05685 PF01219 Prokaryotic diacylglycerol kinase M636_05690 PF00884 Sulfatase M636_05690 PF08019 Phosphoethanolamine transferase EptA/EptB M636_05695 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M636_05700 PF07690 Major Facilitator Superfamily M636_05720 PF01047 MarR family M636_05730 PF01734 Patatin-like phospholipase M636_05735 PF02678 Pirin M636_05735 PF05726 Pirin C-terminal cupin domain M636_05740 PF00313 'Cold-shock' DNA-binding domain M636_05750 PF00962 Adenosine/AMP deaminase M636_05755 PF00462 Glutaredoxin M636_05755 PF08534 Redoxin M636_05765 PF07943 Penicillin-binding protein 5, C-terminal domain M636_05765 PF00768 D-alanyl-D-alanine carboxypeptidase M636_05770 PF02798 Glutathione S-transferase, N-terminal domain M636_05775 PF02909 Tetracyclin repressor-like, C-terminal domain M636_05775 PF00440 Bacterial regulatory proteins, tetR family M636_05780 PF01872 RibD C-terminal domain M636_05845 PF00528 Binding-protein-dependent transport system inner membrane component M636_05850 PF14785 Maltose transport system permease protein MalF P2 domain M636_05850 PF00528 Binding-protein-dependent transport system inner membrane component M636_05855 PF01547 Bacterial extracellular solute-binding protein M636_05865 PF00005 ABC transporter M636_05865 PF08402 TOBE domain M636_05870 PF02397 Bacterial sugar transferase M636_05895 PF13439 Glycosyltransferase Family 4 M636_05895 PF00534 Glycosyl transferases group 1 M636_05930 PF00440 Bacterial regulatory proteins, tetR family M636_05930 PF16925 Tetracyclin repressor-like, C-terminal domain M636_05935 PF16884 N-terminal domain of oxidoreductase M636_05935 PF00107 Zinc-binding dehydrogenase M636_05940 PF13417 Glutathione S-transferase, N-terminal domain M636_05945 PF06628 Catalase-related immune-responsive M636_05945 PF00199 Catalase M636_05950 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M636_05950 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M636_05960 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M636_05970 PF12833 Helix-turn-helix domain M636_05975 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M636_05975 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M636_05980 PF01238 Phosphomannose isomerase type I M636_05990 PF13419 Haloacid dehalogenase-like hydrolase M636_05995 PF00127 Copper binding proteins, plastocyanin/azurin family M636_06000 PF00563 EAL domain M636_06000 PF03707 Bacterial signalling protein N terminal repeat M636_06000 PF00990 Diguanylate cyclase, GGDEF domain M636_06005 PF02386 Cation transport protein M636_06010 PF02080 TrkA-C domain M636_06010 PF02254 TrkA-N domain M636_06015 PF00072 Response regulator receiver domain M636_06015 PF00486 Transcriptional regulatory protein, C terminal M636_06020 PF16736 Single Cache-like M636_06020 PF00989 PAS fold M636_06020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_06020 PF00512 His Kinase A (phospho-acceptor) domain M636_06025 PF00005 ABC transporter M636_06025 PF00664 ABC transporter transmembrane region M636_06030 PF00593 TonB dependent receptor M636_06030 PF07715 TonB-dependent Receptor Plug Domain M636_06035 PF00005 ABC transporter M636_06040 PF01497 Periplasmic binding protein M636_06045 PF01032 FecCD transport family M636_06055 PF00691 OmpA family M636_06070 PF00529 HlyD membrane-fusion protein of T1SS M636_06075 PF00664 ABC transporter transmembrane region M636_06075 PF00005 ABC transporter M636_06085 PF00196 Bacterial regulatory proteins, luxR family M636_06090 PF00196 Bacterial regulatory proteins, luxR family M636_06100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M636_06100 PF00672 HAMP domain M636_06100 PF02743 Cache domain M636_06105 PF07726 ATPase family associated with various cellular activities (AAA) M636_06105 PF17863 AAA lid domain M636_06110 PF01882 Protein of unknown function DUF58 M636_06120 PF13519 von Willebrand factor type A domain M636_06125 PF13519 von Willebrand factor type A domain M636_06125 PF07584 Aerotolerance regulator N-terminal M636_06140 PF00005 ABC transporter M636_06145 PF00528 Binding-protein-dependent transport system inner membrane component M636_06150 PF00528 Binding-protein-dependent transport system inner membrane component M636_06155 PF12849 PBP superfamily domain M636_06160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M636_06160 PF00672 HAMP domain M636_06180 PF07715 TonB-dependent Receptor Plug Domain M636_06180 PF00593 TonB dependent receptor M636_06185 PF00326 Prolyl oligopeptidase family M636_06185 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain M636_06190 PF00270 DEAD/DEAH box helicase M636_06190 PF00271 Helicase conserved C-terminal domain M636_06200 PF03734 L,D-transpeptidase catalytic domain M636_06200 PF01476 LysM domain M636_06200 PF17969 L,D-transpeptidase C-terminal domain M636_06205 PF00875 DNA photolyase M636_06205 PF03441 FAD binding domain of DNA photolyase M636_06210 PF13411 MerR HTH family regulatory protein M636_06215 PF08349 Protein of unknown function (DUF1722) M636_06220 PF01048 Phosphorylase superfamily M636_06235 PF00990 Diguanylate cyclase, GGDEF domain M636_06240 PF11742 Protein of unknown function (DUF3302) M636_06245 PF00529 HlyD membrane-fusion protein of T1SS M636_06245 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M636_06250 PF07155 ECF-type riboflavin transporter, S component M636_06255 PF00005 ABC transporter M636_06255 PF12558 ATP-binding cassette cobalt transporter M636_06270 PF12801 4Fe-4S binding domain M636_06270 PF13237 4Fe-4S dicluster domain M636_06275 PF12838 4Fe-4S dicluster domain M636_06275 PF12800 4Fe-4S binding domain M636_06280 PF00583 Acetyltransferase (GNAT) family M636_06295 PF07238 PilZ domain M636_06295 PF12945 Flagellar protein YcgR M636_06300 PF00672 HAMP domain M636_06300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M636_06305 PF13654 AAA domain M636_06305 PF05362 Lon protease (S16) C-terminal proteolytic domain M636_06315 PF00005 ABC transporter M636_06315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M636_06320 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain M636_06320 PF00326 Prolyl oligopeptidase family M636_06325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_06325 PF03466 LysR substrate binding domain M636_06330 PF02652 L-lactate permease M636_06335 PF01070 FMN-dependent dehydrogenase M636_06345 PF00924 Mechanosensitive ion channel M636_06350 PF00194 Eukaryotic-type carbonic anhydrase M636_06380 PF08240 Alcohol dehydrogenase GroES-like domain M636_06380 PF00107 Zinc-binding dehydrogenase M636_06385 PF00155 Aminotransferase class I and II M636_06390 PF00563 EAL domain M636_06390 PF03707 Bacterial signalling protein N terminal repeat M636_06390 PF00990 Diguanylate cyclase, GGDEF domain M636_06395 PF00497 Bacterial extracellular solute-binding proteins, family 3 M636_06400 PF00266 Aminotransferase class-V M636_06405 PF00080 Copper/zinc superoxide dismutase (SODC) M636_06410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_06410 PF00512 His Kinase A (phospho-acceptor) domain M636_06410 PF08448 PAS fold M636_06410 PF13426 PAS domain M636_06410 PF00072 Response regulator receiver domain M636_06415 PF00072 Response regulator receiver domain M636_06415 PF00486 Transcriptional regulatory protein, C terminal M636_06440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_06440 PF03466 LysR substrate binding domain M636_06445 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M636_06480 PF03466 LysR substrate binding domain M636_06480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_06495 PF18269 T3SS EscN ATPase C-terminal domain M636_06495 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M636_06505 PF14842 FliG N-terminal domain M636_06505 PF01706 FliG C-terminal domain M636_06505 PF14841 FliG middle domain M636_06510 PF01514 Secretory protein of YscJ/FliF family M636_06510 PF08345 Flagellar M-ring protein C-terminal M636_06515 PF02049 Flagellar hook-basal body complex protein FliE M636_06520 PF00072 Response regulator receiver domain M636_06520 PF00158 Sigma-54 interaction domain M636_06520 PF02954 Bacterial regulatory protein, Fis family M636_06535 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term M636_06540 PF00813 FliP family M636_06545 PF01313 Bacterial export proteins, family 3 M636_06550 PF01311 Bacterial export proteins, family 1 M636_06555 PF01312 FlhB HrpN YscU SpaS Family M636_06560 PF00771 FHIPEP family M636_06570 PF00669 Bacterial flagellin N-terminal helical region M636_06570 PF00700 Bacterial flagellin C-terminal helical region M636_06580 PF07195 Flagellar hook-associated protein 2 C-terminus M636_06580 PF07196 Flagellin hook IN motif M636_06580 PF02465 Flagellar hook-associated protein 2 N-terminus M636_06585 PF02561 Flagellar protein FliS M636_06600 PF03748 Flagellar basal body-associated protein FliL M636_06605 PF04545 Sigma-70, region 4 M636_06605 PF04542 Sigma-70 region 2 M636_06610 PF01618 MotA/TolQ/ExbB proton channel family M636_06615 PF13677 Membrane MotB of proton-channel complex MotA/MotB M636_06615 PF00691 OmpA family M636_06625 PF08000 Bacterial PH domain M636_06650 PF04055 Radical SAM superfamily M636_06655 PF00923 Transaldolase/Fructose-6-phosphate aldolase M636_06665 PF00583 Acetyltransferase (GNAT) family M636_06675 PF07690 Major Facilitator Superfamily M636_06680 PF03466 LysR substrate binding domain M636_06680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_06685 PF00892 EamA-like transporter family M636_06710 PF13533 Biotin-lipoyl like M636_06720 PF01594 AI-2E family transporter M636_06725 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) M636_06735 PF00970 Oxidoreductase FAD-binding domain M636_06735 PF00175 Oxidoreductase NAD-binding domain M636_06745 PF09905 DNA-binding protein VF530 M636_06750 PF03466 LysR substrate binding domain M636_06750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_06760 PF00881 Nitroreductase family M636_06765 PF12833 Helix-turn-helix domain M636_06765 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term M636_06770 PF00128 Alpha amylase, catalytic domain M636_06770 PF00686 Starch binding domain M636_06775 PF07943 Penicillin-binding protein 5, C-terminal domain M636_06775 PF00768 D-alanyl-D-alanine carboxypeptidase M636_06780 PF00561 alpha/beta hydrolase fold M636_06795 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading M636_06795 PF18416 N-acetylglucosamine binding protein domain 2 M636_06800 PF01734 Patatin-like phospholipase M636_06805 PF01914 MarC family integral membrane protein M636_06810 PF00881 Nitroreductase family M636_06815 PF10531 SLBB domain M636_06815 PF02563 Polysaccharide biosynthesis/export protein M636_06815 PF18412 Outer-membrane lipoprotein Wza C-terminal domain M636_06820 PF01451 Low molecular weight phosphotyrosine protein phosphatase M636_06825 PF13807 G-rich domain on putative tyrosine kinase M636_06825 PF02706 Chain length determinant protein M636_06825 PF13614 AAA domain M636_06835 PF08803 Putative mono-oxygenase ydhR M636_06840 PF03466 LysR substrate binding domain M636_06840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_06850 PF00375 Sodium:dicarboxylate symporter family M636_06865 PF06803 Protein of unknown function (DUF1232) M636_06870 PF07687 Peptidase dimerisation domain M636_06870 PF01546 Peptidase family M20/M25/M40 M636_06875 PF07670 Nucleoside recognition M636_06880 PF07670 Nucleoside recognition M636_06895 PF00128 Alpha amylase, catalytic domain M636_06900 PF00912 Transglycosylase M636_06905 PF02806 Alpha amylase, C-terminal all-beta domain M636_06905 PF00128 Alpha amylase, catalytic domain M636_06905 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M636_06910 PF02446 4-alpha-glucanotransferase M636_06915 PF00343 Carbohydrate phosphorylase M636_06925 PF00196 Bacterial regulatory proteins, luxR family M636_06925 PF17874 MalT-like TPR region M636_06940 PF02630 SCO1/SenC M636_06950 PF00367 phosphotransferase system, EIIB M636_06950 PF02378 Phosphotransferase system, EIIC M636_06955 PF03193 RsgA GTPase M636_06960 PF00375 Sodium:dicarboxylate symporter family M636_06970 PF08543 Phosphomethylpyrimidine kinase M636_06980 PF13520 Amino acid permease M636_06985 PF01276 Orn/Lys/Arg decarboxylase, major domain M636_06985 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain M636_06985 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain M636_07000 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M636_07000 PF17967 Pullulanase N2 domain M636_07000 PF18494 Pullulanase Ins domain M636_07000 PF03714 Bacterial pullanase-associated domain M636_07000 PF11852 Domain of unknown function (DUF3372) M636_07005 PF04231 Endonuclease I M636_07010 PF16657 Maltogenic Amylase, C-terminal domain M636_07010 PF02903 Alpha amylase, N-terminal ig-like domain M636_07010 PF00128 Alpha amylase, catalytic domain M636_07025 PF02264 LamB porin M636_07030 PF00128 Alpha amylase, catalytic domain M636_07030 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M636_07040 PF07690 Major Facilitator Superfamily M636_07050 PF01551 Peptidase family M23 M636_07050 PF04225 Opacity-associated protein A LysM-like domain M636_07060 PF05193 Peptidase M16 inactive domain M636_07060 PF00675 Insulinase (Peptidase family M16) M636_07065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M636_07065 PF00672 HAMP domain M636_07065 PF17200 Single Cache domain 2 M636_07070 PF00005 ABC transporter M636_07075 PF01032 FecCD transport family M636_07080 PF01032 FecCD transport family M636_07085 PF01497 Periplasmic binding protein M636_07090 PF07715 TonB-dependent Receptor Plug Domain M636_07090 PF07660 Secretin and TonB N terminus short domain M636_07090 PF00593 TonB dependent receptor M636_07095 PF07715 TonB-dependent Receptor Plug Domain M636_07095 PF00593 TonB dependent receptor M636_07100 PF02655 ATP-grasp domain M636_07100 PF00206 Lyase M636_07105 PF06276 Ferric iron reductase FhuF-like transporter M636_07105 PF04183 IucA / IucC family M636_07110 PF07690 Major Facilitator Superfamily M636_07115 PF06276 Ferric iron reductase FhuF-like transporter M636_07115 PF04183 IucA / IucC family M636_07120 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M636_07120 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M636_07125 PF01547 Bacterial extracellular solute-binding protein M636_07130 PF00512 His Kinase A (phospho-acceptor) domain M636_07130 PF08521 Two-component sensor kinase N-terminal M636_07130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_07135 PF00072 Response regulator receiver domain M636_07135 PF00486 Transcriptional regulatory protein, C terminal M636_07140 PF00367 phosphotransferase system, EIIB M636_07140 PF02378 Phosphotransferase system, EIIC M636_07155 PF02653 Branched-chain amino acid transport system / permease component M636_07160 PF00005 ABC transporter M636_07165 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M636_07170 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M636_07170 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M636_07175 PF00596 Class II Aldolase and Adducin N-terminal domain M636_07180 PF02610 L-arabinose isomerase M636_07180 PF11762 L-arabinose isomerase C-terminal domain M636_07190 PF02311 AraC-like ligand binding domain M636_07190 PF12833 Helix-turn-helix domain M636_07205 PF02566 OsmC-like protein M636_07210 PF01047 MarR family M636_07215 PF10417 C-terminal domain of 1-Cys peroxiredoxin M636_07215 PF00578 AhpC/TSA family M636_07220 PF13192 Thioredoxin domain M636_07220 PF07992 Pyridine nucleotide-disulphide oxidoreductase M636_07245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_07245 PF03466 LysR substrate binding domain M636_07250 PF12833 Helix-turn-helix domain M636_07250 PF01965 DJ-1/PfpI family M636_07255 PF08281 Sigma-70, region 4 M636_07255 PF04542 Sigma-70 region 2 M636_07270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M636_07270 PF00672 HAMP domain M636_07270 PF12729 Four helix bundle sensory module for signal transduction M636_07275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_07275 PF03466 LysR substrate binding domain M636_07280 PF11975 Family 4 glycosyl hydrolase C-terminal domain M636_07280 PF02056 Family 4 glycosyl hydrolase M636_07295 PF03475 3-alpha domain M636_07295 PF03473 MOSC domain M636_07300 PF00270 DEAD/DEAH box helicase M636_07300 PF00271 Helicase conserved C-terminal domain M636_07320 PF12833 Helix-turn-helix domain M636_07320 PF06719 AraC-type transcriptional regulator N-terminus M636_07330 PF00005 ABC transporter M636_07330 PF00664 ABC transporter transmembrane region M636_07340 PF01037 Lrp/AsnC ligand binding domain M636_07375 PF00474 Sodium:solute symporter family M636_07385 PF14850 DNA-binding domain of Proline dehydrogenase M636_07385 PF18327 Proline utilization A proline dehydrogenase N-terminal domain M636_07385 PF01619 Proline dehydrogenase M636_07385 PF00171 Aldehyde dehydrogenase family M636_07390 PF12833 Helix-turn-helix domain M636_07405 PF01243 Pyridoxamine 5'-phosphate oxidase M636_07405 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region M636_07410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_07410 PF00512 His Kinase A (phospho-acceptor) domain M636_07410 PF02743 Cache domain M636_07415 PF00158 Sigma-54 interaction domain M636_07415 PF00072 Response regulator receiver domain M636_07415 PF02954 Bacterial regulatory protein, Fis family M636_07420 PF00529 HlyD membrane-fusion protein of T1SS M636_07435 PF00005 ABC transporter M636_07435 PF03412 Peptidase C39 family M636_07435 PF00664 ABC transporter transmembrane region M636_07450 PF03358 NADPH-dependent FMN reductase M636_07455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M636_07460 PF00246 Zinc carboxypeptidase M636_07465 PF01380 SIS domain M636_07465 PF01418 Helix-turn-helix domain, rpiR family M636_07470 PF01380 SIS domain M636_07475 PF02378 Phosphotransferase system, EIIC M636_07475 PF00367 phosphotransferase system, EIIB M636_07480 PF00267 Gram-negative porin M636_07485 PF03575 Peptidase family S51 M636_07495 PF00132 Bacterial transferase hexapeptide (six repeats) M636_07505 PF13718 GNAT acetyltransferase 2 M636_07505 PF05127 Helicase M636_07510 PF02195 ParB-like nuclease domain M636_07510 PF08775 ParB family M636_07515 PF18607 ParA helix turn helix domain M636_07515 PF13614 AAA domain M636_07535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M636_07535 PF00005 ABC transporter M636_07540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M636_07540 PF00005 ABC transporter M636_07550 PF08719 Domain of unknown function (DUF1768) M636_07550 PF00925 GTP cyclohydrolase II M636_07560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_07560 PF00672 HAMP domain M636_07560 PF00512 His Kinase A (phospho-acceptor) domain M636_07560 PF00072 Response regulator receiver domain M636_07560 PF01627 Hpt domain M636_07560 PF17149 Periplasmic sensor domain found in signal transduction proteins M636_07570 PF01709 Transcriptional regulator M636_07575 PF01098 Cell cycle protein M636_07585 PF00005 ABC transporter M636_07605 PF06580 Histidine kinase M636_07605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_07605 PF07694 5TMR of 5TMR-LYT M636_07605 PF13492 GAF domain M636_07610 PF00072 Response regulator receiver domain M636_07610 PF04397 LytTr DNA-binding domain M636_07620 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M636_07625 PF17200 Single Cache domain 2 M636_07625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M636_07625 PF00672 HAMP domain M636_07640 PF00132 Bacterial transferase hexapeptide (six repeats) M636_07645 PF03616 Sodium/glutamate symporter M636_07655 PF00005 ABC transporter M636_07660 PF00155 Aminotransferase class I and II M636_07660 PF00392 Bacterial regulatory proteins, gntR family M636_07665 PF03616 Sodium/glutamate symporter M636_07675 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase M636_07690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_07690 PF03466 LysR substrate binding domain M636_07695 PF02678 Pirin M636_07695 PF17954 Quercetinase C-terminal cupin domain M636_07700 PF07681 DoxX M636_07710 PF06029 AlkA N-terminal domain M636_07710 PF00730 HhH-GPD superfamily base excision DNA repair protein M636_07715 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M636_07715 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M636_07725 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 M636_07735 PF03600 Citrate transporter M636_07760 PF00704 Glycosyl hydrolases family 18 M636_07760 PF08329 Chitinase A, N-terminal domain M636_07770 PF06865 Pyrimidine/purine nucleoside phosphorylase M636_07780 PF00990 Diguanylate cyclase, GGDEF domain M636_07780 PF00563 EAL domain M636_07785 PF01554 MatE M636_07790 PF00849 RNA pseudouridylate synthase M636_07805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_07805 PF03466 LysR substrate binding domain M636_07820 PF00990 Diguanylate cyclase, GGDEF domain M636_07820 PF17152 Periplasmic sensor domain M636_07830 PF00756 Putative esterase M636_07835 PF08240 Alcohol dehydrogenase GroES-like domain M636_07835 PF00107 Zinc-binding dehydrogenase M636_07840 PF00797 N-acetyltransferase M636_07845 PF03466 LysR substrate binding domain M636_07845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_07860 PF01614 Bacterial transcriptional regulator M636_07860 PF09339 IclR helix-turn-helix domain M636_07870 PF10688 Bacterial inner membrane protein M636_07875 PF07883 Cupin domain M636_07890 PF00294 pfkB family carbohydrate kinase M636_07895 PF01081 KDPG and KHG aldolase M636_07910 PF13229 Right handed beta helix region M636_07915 PF00474 Sodium:solute symporter family M636_07920 PF14583 Oligogalacturonate lyase M636_07925 PF08021 Siderophore-interacting FAD-binding domain M636_07925 PF04954 Siderophore-interacting protein M636_07930 PF01810 LysE type translocator M636_07935 PF01037 Lrp/AsnC ligand binding domain M636_07940 PF18416 N-acetylglucosamine binding protein domain 2 M636_07940 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading M636_07955 PF13599 Pentapeptide repeats (9 copies) M636_07960 PF03922 OmpW family M636_07965 PF13533 Biotin-lipoyl like M636_07970 PF07690 Major Facilitator Superfamily M636_07980 PF12706 Beta-lactamase superfamily domain M636_07990 PF01204 Trehalase M636_07995 PF01661 Macro domain M636_08000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M636_08005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_08005 PF03466 LysR substrate binding domain M636_08015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_08015 PF03466 LysR substrate binding domain M636_08030 PF13419 Haloacid dehalogenase-like hydrolase M636_08055 PF13556 PucR C-terminal helix-turn-helix domain M636_08055 PF17853 GGDEF-like domain M636_08055 PF05651 Putative sugar diacid recognition M636_08060 PF02447 GntP family permease M636_08065 PF02595 Glycerate kinase family M636_08070 PF00155 Aminotransferase class I and II M636_08070 PF00392 Bacterial regulatory proteins, gntR family M636_08090 PF00583 Acetyltransferase (GNAT) family M636_08115 PF03264 NapC/NirT cytochrome c family, N-terminal region M636_08120 PF18364 Molybdopterin oxidoreductase N-terminal domain M636_08120 PF00384 Molybdopterin oxidoreductase M636_08120 PF01568 Molydopterin dinucleotide binding domain M636_08130 PF02581 Thiamine monophosphate synthase M636_08135 PF02110 Hydroxyethylthiazole kinase family M636_08140 PF03070 TENA/THI-4/PQQC family M636_08145 PF09084 NMT1/THI5 like M636_08150 PF00528 Binding-protein-dependent transport system inner membrane component M636_08155 PF00005 ABC transporter M636_08160 PF08543 Phosphomethylpyrimidine kinase M636_08165 PF01523 Putative modulator of DNA gyrase M636_08170 PF01523 Putative modulator of DNA gyrase M636_08175 PF04013 Putative SAM-dependent RNA methyltransferase M636_08215 PF00999 Sodium/hydrogen exchanger family M636_08220 PF02574 Homocysteine S-methyltransferase M636_08220 PF02607 B12 binding domain M636_08220 PF02965 Vitamin B12 dependent methionine synthase, activation domain M636_08220 PF02310 B12 binding domain M636_08220 PF00809 Pterin binding enzyme M636_08225 PF01842 ACT domain M636_08225 PF00696 Amino acid kinase family M636_08235 PF00266 Aminotransferase class-V M636_08245 PF17760 UvrA interaction domain M636_08245 PF17755 UvrA DNA-binding domain M636_08245 PF00005 ABC transporter M636_08250 PF00483 Nucleotidyl transferase M636_08255 PF00196 Bacterial regulatory proteins, luxR family M636_08260 PF00436 Single-strand binding protein family M636_08265 PF00990 Diguanylate cyclase, GGDEF domain M636_08265 PF17157 Gammaproteobacterial periplasmic sensor domain M636_08265 PF00563 EAL domain M636_08285 PF11741 AMIN domain M636_08285 PF00263 Bacterial type II and III secretion system protein M636_08285 PF03958 Bacterial type II/III secretion system short domain M636_08285 PF07660 Secretin and TonB N terminus short domain M636_08290 PF01471 Putative peptidoglycan binding domain M636_08290 PF13401 AAA domain M636_08300 PF00437 Type II/IV secretion system protein M636_08300 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M636_08305 PF00482 Type II secretion system (T2SS), protein F M636_08315 PF07963 Prokaryotic N-terminal methylation motif M636_08315 PF00114 Pilin (bacterial filament) M636_08355 PF04085 rod shape-determining protein MreC M636_08360 PF04093 rod shape-determining protein MreD M636_08365 PF02545 Maf-like protein M636_08370 PF00575 S1 RNA binding domain M636_08370 PF10150 Ribonuclease E/G family M636_08375 PF13502 AsmA-like C-terminal region M636_08375 PF13116 Protein of unknown function M636_08380 PF00795 Carbon-nitrogen hydrolase M636_08385 PF01523 Putative modulator of DNA gyrase M636_08390 PF13638 PIN domain M636_08390 PF02562 PhoH-like protein M636_08395 PF12137 RNA polymerase recycling family C-terminal M636_08395 PF00271 Helicase conserved C-terminal domain M636_08395 PF00176 SNF2 family N-terminal domain M636_08395 PF18337 RapA N-terminal Tudor like domain M636_08395 PF18339 RapA N-terminal Tudor like domain 1 M636_08410 PF00849 RNA pseudouridylate synthase M636_08415 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M636_08415 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M636_08420 PF04751 Protein of unknown function (DUF615) M636_08425 PF01523 Putative modulator of DNA gyrase M636_08430 PF01769 Divalent cation transporter M636_08430 PF03448 MgtE intracellular N domain M636_08430 PF00571 CBS domain M636_08435 PF00381 PTS HPr component phosphorylation site M636_08440 PF03668 P-loop ATPase protein family M636_08445 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M636_08450 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M636_08455 PF04963 Sigma-54 factor, core binding domain M636_08455 PF00309 Sigma-54 factor, Activator interacting domain (AID) M636_08455 PF04552 Sigma-54, DNA binding domain M636_08460 PF00005 ABC transporter M636_08460 PF12399 Branched-chain amino acid ATP-binding cassette transporter M636_08465 PF03968 OstA-like protein M636_08475 PF01380 SIS domain M636_08475 PF00571 CBS domain M636_08480 PF01699 Sodium/calcium exchanger protein M636_08485 PF00005 ABC transporter M636_08490 PF02405 Permease MlaE M636_08495 PF02470 MlaD protein M636_08500 PF05494 MlaC protein M636_08510 PF01722 BolA-like protein M636_08515 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M636_08520 PF01553 Acyltransferase M636_08525 PF01042 Endoribonuclease L-PSP M636_08530 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain M636_08530 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain M636_08535 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M636_08535 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M636_08540 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M636_08540 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M636_08550 PF06877 Regulator of ribonuclease activity B M636_08560 PF00583 Acetyltransferase (GNAT) family M636_08570 PF08264 Anticodon-binding domain of tRNA M636_08570 PF10458 Valyl tRNA synthetase tRNA binding arm M636_08570 PF00133 tRNA synthetases class I (I, L, M and V) M636_08575 PF04364 DNA polymerase III chi subunit, HolC M636_08580 PF02789 Cytosol aminopeptidase family, N-terminal domain M636_08580 PF00883 Cytosol aminopeptidase family, catalytic domain M636_08585 PF03739 Lipopolysaccharide export system permease LptF/LptG M636_08590 PF03739 Lipopolysaccharide export system permease LptF/LptG M636_08600 PF10011 Predicted membrane protein (DUF2254) M636_08605 PF00106 short chain dehydrogenase M636_08615 PF00440 Bacterial regulatory proteins, tetR family M636_08615 PF08360 QacR-like protein, C-terminal region M636_08625 PF13533 Biotin-lipoyl like M636_08635 PF01522 Polysaccharide deacetylase M636_08640 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M636_08645 PF02378 Phosphotransferase system, EIIC M636_08650 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit M636_08655 PF11975 Family 4 glycosyl hydrolase C-terminal domain M636_08655 PF02056 Family 4 glycosyl hydrolase M636_08660 PF04794 YdjC-like protein M636_08665 PF00356 Bacterial regulatory proteins, lacI family M636_08665 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M636_08670 PF00072 Response regulator receiver domain M636_08715 PF00171 Aldehyde dehydrogenase family M636_08745 PF00672 HAMP domain M636_08745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M636_08745 PF17200 Single Cache domain 2 M636_08785 PF01464 Transglycosylase SLT domain M636_08785 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain M636_08790 PF04362 Bacterial Fe(2+) trafficking M636_08795 PF14815 NUDIX domain M636_08795 PF00730 HhH-GPD superfamily base excision DNA repair protein M636_08795 PF00633 Helix-hairpin-helix motif M636_08800 PF02390 Putative methyltransferase M636_08805 PF02086 D12 class N6 adenine-specific DNA methyltransferase M636_08810 PF04960 Glutaminase M636_08815 PF06969 HemN C-terminal domain M636_08815 PF04055 Radical SAM superfamily M636_08820 PF01725 Ham1 family M636_08830 PF02594 Uncharacterised ACR, YggU family COG1872 M636_08835 PF02325 YGGT family M636_08840 PF03807 NADP oxidoreductase coenzyme F420-dependent M636_08840 PF14748 Pyrroline-5-carboxylate reductase dimerisation M636_08845 PF01168 Alanine racemase, N-terminal domain M636_08850 PF00437 Type II/IV secretion system protein M636_08855 PF00437 Type II/IV secretion system protein M636_08860 PF03652 Holliday junction resolvase M636_08865 PF02622 Uncharacterized ACR, COG1678 M636_08870 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain M636_08870 PF02951 Prokaryotic glutathione synthetase, N-terminal domain M636_08875 PF04452 RNA methyltransferase M636_08880 PF04231 Endonuclease I M636_08885 PF17283 SprT-like zinc ribbon domain M636_08885 PF10263 SprT-like family M636_08895 PF02773 S-adenosylmethionine synthetase, C-terminal domain M636_08895 PF02772 S-adenosylmethionine synthetase, central domain M636_08895 PF00438 S-adenosylmethionine synthetase, N-terminal domain M636_08905 PF02780 Transketolase, C-terminal domain M636_08905 PF00456 Transketolase, thiamine diphosphate binding domain M636_08905 PF02779 Transketolase, pyrimidine binding domain M636_08910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_08910 PF03466 LysR substrate binding domain M636_08915 PF00593 TonB dependent receptor M636_08915 PF07715 TonB-dependent Receptor Plug Domain M636_08920 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M636_08920 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M636_08925 PF00162 Phosphoglycerate kinase M636_08930 PF01116 Fructose-bisphosphate aldolase class-II M636_08935 PF00924 Mechanosensitive ion channel M636_08935 PF05552 Conserved TM helix M636_08940 PF04073 Aminoacyl-tRNA editing domain M636_08945 PF01810 LysE type translocator M636_08950 PF03466 LysR substrate binding domain M636_08950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_08960 PF04402 Protein of unknown function (DUF541) M636_08965 PF01842 ACT domain M636_08965 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M636_08965 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M636_08970 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) M636_08975 PF01812 5-formyltetrahydrofolate cyclo-ligase family M636_08980 PF05164 Cell division protein ZapA M636_08985 PF03695 Uncharacterised protein family (UPF0149) M636_08990 PF01494 FAD binding domain M636_08995 PF01494 FAD binding domain M636_09010 PF01571 Aminomethyltransferase folate-binding domain M636_09015 PF03937 Flavinator of succinate dehydrogenase M636_09020 PF02910 Fumarate reductase flavoprotein C-term M636_09020 PF00890 FAD binding domain M636_09025 PF08281 Sigma-70, region 4 M636_09025 PF04542 Sigma-70 region 2 M636_09030 PF03872 Anti sigma-E protein RseA, N-terminal domain M636_09030 PF03873 Anti sigma-E protein RseA, C-terminal domain M636_09035 PF03888 MucB/RseB N-terminal domain M636_09035 PF17188 MucB/RseB C-terminal domain M636_09045 PF06421 GTP-binding protein LepA C-terminus M636_09045 PF00679 Elongation factor G C-terminus M636_09045 PF00009 Elongation factor Tu GTP binding domain M636_09045 PF03144 Elongation factor Tu domain 2 M636_09050 PF10502 Signal peptidase, peptidase S26 M636_09055 PF00035 Double-stranded RNA binding motif M636_09055 PF14622 Ribonuclease-III-like M636_09060 PF07650 KH domain M636_09060 PF01926 50S ribosome-binding GTPase M636_09065 PF11967 Recombination protein O N terminal M636_09065 PF02565 Recombination protein O C terminal M636_09070 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ M636_09075 PF01648 4'-phosphopantetheinyl transferase superfamily M636_09080 PF01627 Hpt domain M636_09080 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M636_09080 PF00512 His Kinase A (phospho-acceptor) domain M636_09080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_09080 PF00672 HAMP domain M636_09080 PF00072 Response regulator receiver domain M636_09085 PF05958 tRNA (Uracil-5-)-methyltransferase M636_09085 PF01938 TRAM domain M636_09090 PF04607 Region found in RelA / SpoT proteins M636_09090 PF02824 TGS domain M636_09090 PF13291 ACT domain M636_09095 PF03819 MazG nucleotide pyrophosphohydrolase domain M636_09100 PF06418 CTP synthase N-terminus M636_09100 PF00117 Glutamine amidotransferase class-I M636_09105 PF03952 Enolase, N-terminal domain M636_09105 PF00113 Enolase, C-terminal TIM barrel domain M636_09110 PF04977 Septum formation initiator M636_09115 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase M636_09120 PF02542 YgbB family M636_09125 PF01142 tRNA pseudouridine synthase D (TruD) M636_09130 PF01975 Survival protein SurE M636_09140 PF01476 LysM domain M636_09140 PF01551 Peptidase family M23 M636_09145 PF00488 MutS domain V M636_09145 PF05188 MutS domain II M636_09145 PF05192 MutS domain III M636_09145 PF05190 MutS family domain IV M636_09145 PF01624 MutS domain I M636_09150 PF02464 Competence-damaged protein M636_09155 PF00154 recA bacterial DNA recombination protein M636_09160 PF02631 RecX family M636_09165 PF02272 DHHA1 domain M636_09165 PF01411 tRNA synthetases class II (A) M636_09165 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M636_09170 PF13840 ACT domain M636_09170 PF01842 ACT domain M636_09170 PF00696 Amino acid kinase family M636_09175 PF02599 Global regulator protein family M636_09230 PF04277 Oxaloacetate decarboxylase, gamma chain M636_09235 PF00364 Biotin-requiring enzyme M636_09235 PF00682 HMGL-like M636_09235 PF02436 Conserved carboxylase domain M636_09240 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit M636_09245 PF00107 Zinc-binding dehydrogenase M636_09245 PF08240 Alcohol dehydrogenase GroES-like domain M636_09250 PF09335 SNARE associated Golgi protein M636_09255 PF05193 Peptidase M16 inactive domain M636_09255 PF00675 Insulinase (Peptidase family M16) M636_09260 PF04262 Glutamate-cysteine ligase M636_09270 PF02664 S-Ribosylhomocysteinase (LuxS) M636_09275 PF00571 CBS domain M636_09275 PF03471 Transporter associated domain M636_09275 PF01595 Cyclin M transmembrane N-terminal domain M636_09280 PF01578 Cytochrome C assembly protein M636_09285 PF02978 Signal peptide binding domain M636_09285 PF02881 SRP54-type protein, helical bundle domain M636_09285 PF00448 SRP54-type protein, GTPase domain M636_09290 PF00886 Ribosomal protein S16 M636_09295 PF05239 PRC-barrel domain M636_09295 PF01782 RimM N-terminal domain M636_09300 PF01746 tRNA (Guanine-1)-methyltransferase M636_09305 PF01245 Ribosomal protein L19 M636_09310 PF03884 DNA gyrase inhibitor YacG M636_09315 PF07072 Cell division protein M636_09320 PF01121 Dephospho-CoA kinase M636_09325 PF06750 Bacterial Peptidase A24 N-terminal domain M636_09325 PF01478 Type IV leader peptidase family M636_09330 PF00482 Type II secretion system (T2SS), protein F M636_09335 PF00437 Type II/IV secretion system protein M636_09335 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M636_09340 PF07963 Prokaryotic N-terminal methylation motif M636_09340 PF00114 Pilin (bacterial filament) M636_09345 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain M636_09345 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain M636_09350 PF01510 N-acetylmuramoyl-L-alanine amidase M636_09355 PF07729 FCD domain M636_09355 PF00392 Bacterial regulatory proteins, gntR family M636_09360 PF00456 Transketolase, thiamine diphosphate binding domain M636_09360 PF17831 Pyruvate dehydrogenase E1 component middle domain M636_09365 PF02817 e3 binding domain M636_09365 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M636_09365 PF00364 Biotin-requiring enzyme M636_09370 PF07992 Pyridine nucleotide-disulphide oxidoreductase M636_09370 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M636_09375 PF00440 Bacterial regulatory proteins, tetR family M636_09380 PF00156 Phosphoribosyl transferase domain M636_09385 PF00484 Carbonic anhydrase M636_09390 PF01740 STAS domain M636_09390 PF00916 Sulfate permease family M636_09395 PF00005 ABC transporter M636_09400 PF01061 ABC-2 type transporter M636_09405 PF03279 Bacterial lipid A biosynthesis acyltransferase M636_09410 PF02569 Pantoate-beta-alanine ligase M636_09415 PF02548 Ketopantoate hydroxymethyltransferase M636_09420 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M636_09425 PF01743 Poly A polymerase head domain M636_09425 PF12627 Probable RNA and SrmB- binding site of polymerase A M636_09425 PF12626 Polymerase A arginine-rich C-terminus M636_09430 PF00749 tRNA synthetases class I (E and Q), catalytic domain M636_09435 PF01258 Prokaryotic dksA/traR C4-type zinc finger M636_09440 PF03749 Sugar fermentation stimulation protein RE domain M636_09440 PF17746 SfsA N-terminal OB domain M636_09445 PF00270 DEAD/DEAH box helicase M636_09445 PF04408 Helicase associated domain (HA2) M636_09445 PF00271 Helicase conserved C-terminal domain M636_09445 PF08482 ATP-dependent helicase C-terminal M636_09450 PF00912 Transglycosylase M636_09450 PF00905 Penicillin binding protein transpeptidase domain M636_09450 PF14814 Bifunctional transglycosylase second domain M636_09455 PF01734 Patatin-like phospholipase M636_09460 PF11791 Aconitate B N-terminal domain M636_09460 PF06434 Aconitate hydratase 2 N-terminus M636_09460 PF00330 Aconitase family (aconitate hydratase) M636_09465 PF06062 Uncharacterised protein family (UPF0231) M636_09470 PF00543 Nitrogen regulatory protein P-II M636_09475 PF00909 Ammonium Transporter Family M636_09480 PF13416 Bacterial extracellular solute-binding protein M636_09490 PF08402 TOBE domain M636_09490 PF00005 ABC transporter M636_09495 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M636_09495 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M636_09495 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M636_09500 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain M636_09500 PF06165 Glycosyltransferase family 36 M636_09505 PF02838 Glycosyl hydrolase family 20, domain 2 M636_09505 PF00728 Glycosyl hydrolase family 20, catalytic domain M636_09510 PF01869 BadF/BadG/BcrA/BcrD ATPase family M636_09520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M636_09520 PF00005 ABC transporter M636_09525 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M636_09525 PF00005 ABC transporter M636_09530 PF00528 Binding-protein-dependent transport system inner membrane component M636_09530 PF12911 N-terminal TM domain of oligopeptide transport permease C M636_09535 PF00528 Binding-protein-dependent transport system inner membrane component M636_09540 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M636_09545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_09545 PF00497 Bacterial extracellular solute-binding proteins, family 3 M636_09545 PF00072 Response regulator receiver domain M636_09545 PF00512 His Kinase A (phospho-acceptor) domain M636_09550 PF08468 Methyltransferase small domain N-terminal M636_09550 PF05175 Methyltransferase small domain M636_09555 PF01594 AI-2E family transporter M636_09570 PF00202 Aminotransferase class-III M636_09575 PF01521 Iron-sulphur cluster biosynthesis M636_09585 PF00873 AcrB/AcrD/AcrF family M636_09590 PF01551 Peptidase family M23 M636_09590 PF08525 Opacity-associated protein A N-terminal motif M636_09590 PF01476 LysM domain M636_09595 PF00579 tRNA synthetases class I (W and Y) M636_09605 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family M636_09610 PF13609 Gram-negative porin M636_09615 PF01272 Transcription elongation factor, GreA/GreB, C-term M636_09615 PF03449 Transcription elongation factor, N-terminal M636_09620 PF01985 CRS1 / YhbY (CRM) domain M636_09625 PF01728 FtsJ-like methyltransferase M636_09630 PF00004 ATPase family associated with various cellular activities (AAA) M636_09630 PF01434 Peptidase family M41 M636_09630 PF17862 AAA+ lid domain M636_09630 PF06480 FtsH Extracellular M636_09635 PF00809 Pterin binding enzyme M636_09640 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M636_09640 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M636_09640 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M636_09640 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M636_09645 PF03840 Preprotein translocase SecG subunit M636_09660 PF17384 RimP C-terminal SH3 domain M636_09660 PF02576 RimP N-terminal domain M636_09665 PF00575 S1 RNA binding domain M636_09665 PF08529 NusA N-terminal domain M636_09665 PF13184 NusA-like KH domain M636_09670 PF04760 Translation initiation factor IF-2, N-terminal region M636_09670 PF08364 Bacterial translation initiation factor IF-2 associated region M636_09670 PF00009 Elongation factor Tu GTP binding domain M636_09670 PF11987 Translation-initiation factor 2 M636_09675 PF02033 Ribosome-binding factor A M636_09680 PF01509 TruB family pseudouridylate synthase (N terminal domain) M636_09680 PF16198 tRNA pseudouridylate synthase B C-terminal domain M636_09680 PF09157 Pseudouridine synthase II TruB, C-terminal M636_09685 PF00312 Ribosomal protein S15 M636_09690 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain M636_09690 PF01138 3' exoribonuclease family, domain 1 M636_09690 PF03725 3' exoribonuclease family, domain 2 M636_09690 PF00575 S1 RNA binding domain M636_09690 PF00013 KH domain M636_09695 PF07719 Tetratricopeptide repeat M636_09695 PF13181 Tetratricopeptide repeat M636_09705 PF01554 MatE M636_09720 PF00563 EAL domain M636_09720 PF00990 Diguanylate cyclase, GGDEF domain M636_09720 PF03707 Bacterial signalling protein N terminal repeat M636_09730 PF13508 Acetyltransferase (GNAT) domain M636_09750 PF16658 Class II release factor RF3, C-terminal domain M636_09750 PF03144 Elongation factor Tu domain 2 M636_09750 PF00009 Elongation factor Tu GTP binding domain M636_09760 PF01026 TatD related DNase M636_09765 PF07662 Na+ dependent nucleoside transporter C-terminus M636_09765 PF07670 Nucleoside recognition M636_09765 PF01773 Na+ dependent nucleoside transporter N-terminus M636_09770 PF01791 DeoC/LacD family aldolase M636_09775 PF00591 Glycosyl transferase family, a/b domain M636_09775 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain M636_09775 PF02885 Glycosyl transferase family, helical bundle domain M636_09780 PF01676 Metalloenzyme superfamily M636_09785 PF01048 Phosphorylase superfamily M636_09795 PF18429 Domain of unknown function (DUF5609) M636_09805 PF18073 Rubredoxin metal binding domain M636_09810 PF14492 Elongation Factor G, domain II M636_09810 PF00009 Elongation factor Tu GTP binding domain M636_09810 PF03144 Elongation factor Tu domain 2 M636_09810 PF03764 Elongation factor G, domain IV M636_09810 PF00679 Elongation factor G C-terminus M636_09815 PF03466 LysR substrate binding domain M636_09815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_09825 PF00501 AMP-binding enzyme M636_09830 PF12833 Helix-turn-helix domain M636_09830 PF02805 Metal binding domain of Ada M636_09855 PF13629 Pilus formation protein N terminal region M636_09855 PF04972 BON domain M636_09855 PF00263 Bacterial type II and III secretion system protein M636_09885 PF00437 Type II/IV secretion system protein M636_09915 PF03466 LysR substrate binding domain M636_09915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_09920 PF13520 Amino acid permease M636_09925 PF04074 YhcH/YjgK/YiaL M636_09930 PF02837 Glycosyl hydrolases family 2, sugar binding domain M636_09930 PF02929 Beta galactosidase small chain M636_09930 PF00703 Glycosyl hydrolases family 2 M636_09930 PF16353 Domain of unknown function(DUF4981) M636_09930 PF02836 Glycosyl hydrolases family 2, TIM barrel domain M636_09935 PF00356 Bacterial regulatory proteins, lacI family M636_09940 PF16363 GDP-mannose 4,6 dehydratase M636_09945 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain M636_09945 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain M636_09950 PF10509 Galactokinase galactose-binding signature M636_09950 PF08544 GHMP kinases C terminal M636_09950 PF00288 GHMP kinases N terminal domain M636_09955 PF01263 Aldose 1-epimerase M636_09960 PF00356 Bacterial regulatory proteins, lacI family M636_09975 PF00356 Bacterial regulatory proteins, lacI family M636_09980 PF01588 Putative tRNA binding domain M636_09995 PF01544 CorA-like Mg2+ transporter protein M636_10000 PF01266 FAD dependent oxidoreductase M636_10000 PF16901 C-terminal domain of alpha-glycerophosphate oxidase M636_10005 PF08220 DeoR-like helix-turn-helix domain M636_10005 PF00455 DeoR C terminal sensor domain M636_10010 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M636_10010 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M636_10015 PF00230 Major intrinsic protein M636_10020 PF07690 Major Facilitator Superfamily M636_10025 PF03009 Glycerophosphoryl diester phosphodiesterase family M636_10030 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle M636_10030 PF14602 Hexapeptide repeat of succinyl-transferase M636_10035 PF07130 YebG protein M636_10040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_10040 PF03466 LysR substrate binding domain M636_10050 PF11893 Domain of unknown function (DUF3413) M636_10050 PF00884 Sulfatase M636_10055 PF17946 RecC C-terminal domain M636_10065 PF12705 PD-(D/E)XK nuclease superfamily M636_10065 PF00580 UvrD/REP helicase N-terminal domain M636_10065 PF13361 UvrD-like helicase C-terminal domain M636_10070 PF13538 UvrD-like helicase C-terminal domain M636_10075 PF00583 Acetyltransferase (GNAT) family M636_10075 PF00696 Amino acid kinase family M636_10085 PF03562 MltA specific insert domain M636_10085 PF06725 3D domain M636_10090 PF00899 ThiF family M636_10095 PF02657 Fe-S metabolism associated domain M636_10100 PF17158 Membrane-associated sensor, integral membrane domain M636_10100 PF00990 Diguanylate cyclase, GGDEF domain M636_10105 PF00266 Aminotransferase class-V M636_10110 PF01965 DJ-1/PfpI family M636_10115 PF08546 Ketopantoate reductase PanE/ApbA C terminal M636_10115 PF02558 Ketopantoate reductase PanE/ApbA M636_10120 PF03502 Nucleoside-specific channel-forming protein, Tsx M636_10130 PF04542 Sigma-70 region 2 M636_10130 PF04545 Sigma-70, region 4 M636_10140 PF07690 Major Facilitator Superfamily M636_10150 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M636_10155 PF03923 Uncharacterized lipoprotein M636_10155 PF08139 Prokaryotic membrane lipoprotein lipid attachment site M636_10160 PF05175 Methyltransferase small domain M636_10165 PF01722 BolA-like protein M636_10175 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) M636_10175 PF11973 NQRA C-terminal domain M636_10180 PF03116 NQR2, RnfD, RnfE family M636_10185 PF04205 FMN-binding domain M636_10190 PF02508 Rnf-Nqr subunit, membrane protein M636_10195 PF02508 Rnf-Nqr subunit, membrane protein M636_10200 PF00111 2Fe-2S iron-sulfur cluster binding domain M636_10200 PF00175 Oxidoreductase NAD-binding domain M636_10200 PF00970 Oxidoreductase FAD-binding domain M636_10205 PF02424 ApbE family M636_10220 PF00817 impB/mucB/samB family M636_10220 PF11799 impB/mucB/samB family C-terminal domain M636_10220 PF11798 IMS family HHH motif M636_10225 PF16124 RecQ zinc-binding M636_10225 PF00570 HRDC domain M636_10225 PF09382 RQC domain M636_10225 PF00270 DEAD/DEAH box helicase M636_10225 PF00271 Helicase conserved C-terminal domain M636_10230 PF03449 Transcription elongation factor, N-terminal M636_10230 PF01272 Transcription elongation factor, GreA/GreB, C-term M636_10245 PF00209 Sodium:neurotransmitter symporter family M636_10255 PF06786 Uncharacterised protein family (UPF0253) M636_10265 PF04073 Aminoacyl-tRNA editing domain M636_10265 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M636_10265 PF03129 Anticodon binding domain M636_10270 PF18389 TrmO C-terminal domain M636_10270 PF01980 tRNA-methyltransferase O M636_10275 PF01197 Ribosomal protein L31 M636_10280 PF03806 AbgT putative transporter family M636_10285 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 M636_10310 PF04287 tRNA pseudouridine synthase C M636_10315 PF00849 RNA pseudouridylate synthase M636_10320 PF11944 Protein of unknown function (DUF3461) M636_10325 PF01842 ACT domain M636_10325 PF01909 Nucleotidyltransferase domain M636_10325 PF01966 HD domain M636_10325 PF08335 GlnD PII-uridylyltransferase M636_10330 PF00557 Metallopeptidase family M24 M636_10335 PF00318 Ribosomal protein S2 M636_10340 PF00889 Elongation factor TS M636_10345 PF00696 Amino acid kinase family M636_10350 PF01765 Ribosome recycling factor M636_10355 PF01255 Putative undecaprenyl diphosphate synthase M636_10365 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase M636_10365 PF13288 DXP reductoisomerase C-terminal domain M636_10365 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain M636_10370 PF02163 Peptidase family M50 M636_10370 PF17820 PDZ domain M636_10375 PF07244 Surface antigen variable number repeat M636_10375 PF01103 Surface antigen M636_10380 PF03938 Outer membrane protein (OmpH-like) M636_10385 PF00132 Bacterial transferase hexapeptide (six repeats) M636_10385 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD M636_10390 PF07977 FabA-like domain M636_10395 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 M636_10395 PF00132 Bacterial transferase hexapeptide (six repeats) M636_10400 PF02684 Lipid-A-disaccharide synthetase M636_10405 PF01351 Ribonuclease HII M636_10410 PF02811 PHP domain M636_10410 PF14579 Helix-hairpin-helix motif M636_10410 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M636_10410 PF07733 Bacterial DNA polymerase III alpha NTPase domain M636_10410 PF01336 OB-fold nucleic acid binding domain M636_10415 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit M636_10420 PF01171 PP-loop family M636_10420 PF09179 TilS substrate binding domain M636_10420 PF11734 TilS substrate C-terminal domain M636_10425 PF00034 Cytochrome c M636_10430 PF00543 Nitrogen regulatory protein P-II M636_10435 PF03372 Endonuclease/Exonuclease/phosphatase family M636_10445 PF01464 Transglycosylase SLT domain M636_10445 PF01476 LysM domain M636_10450 PF16123 Hydroxyacylglutathione hydrolase C-terminus M636_10450 PF00753 Metallo-beta-lactamase superfamily M636_10455 PF08241 Methyltransferase domain M636_10460 PF00075 RNase H M636_10465 PF00929 Exonuclease M636_10475 PF00916 Sulfate permease family M636_10475 PF01740 STAS domain M636_10480 PF02770 Acyl-CoA dehydrogenase, middle domain M636_10480 PF09317 Domain of unknown function (DUF1974) M636_10480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M636_10480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M636_10485 PF13580 SIS domain M636_10490 PF13230 Glutamine amidotransferases class-II M636_10495 PF00551 Formyl transferase M636_10500 PF00586 AIR synthase related protein, N-terminal domain M636_10500 PF02769 AIR synthase related protein, C-terminal domain M636_10510 PF00860 Permease family M636_10525 PF03358 NADPH-dependent FMN reductase M636_10530 PF03960 ArsC family M636_10535 PF13181 Tetratricopeptide repeat M636_10535 PF01435 Peptidase family M48 M636_10545 PF01594 AI-2E family transporter M636_10550 PF00578 AhpC/TSA family M636_10555 PF01842 ACT domain M636_10560 PF00701 Dihydrodipicolinate synthetase family M636_10580 PF01546 Peptidase family M20/M25/M40 M636_10580 PF07687 Peptidase dimerisation domain M636_10585 PF03960 ArsC family M636_10605 PF11143 Protein of unknown function (DUF2919) M636_10610 PF04261 Dyp-type peroxidase family M636_10615 PF00700 Bacterial flagellin C-terminal helical region M636_10615 PF07196 Flagellin hook IN motif M636_10615 PF00669 Bacterial flagellin N-terminal helical region M636_10625 PF00669 Bacterial flagellin N-terminal helical region M636_10625 PF07196 Flagellin hook IN motif M636_10625 PF00700 Bacterial flagellin C-terminal helical region M636_10630 PF00669 Bacterial flagellin N-terminal helical region M636_10630 PF07196 Flagellin hook IN motif M636_10630 PF00700 Bacterial flagellin C-terminal helical region M636_10635 PF03646 FlaG protein M636_10640 PF02465 Flagellar hook-associated protein 2 N-terminus M636_10640 PF07195 Flagellar hook-associated protein 2 C-terminus M636_10640 PF07196 Flagellin hook IN motif M636_10650 PF02561 Flagellar protein FliS M636_10655 PF01590 GAF domain M636_10655 PF02954 Bacterial regulatory protein, Fis family M636_10655 PF00158 Sigma-54 interaction domain M636_10660 PF00512 His Kinase A (phospho-acceptor) domain M636_10660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_10665 PF00158 Sigma-54 interaction domain M636_10665 PF02954 Bacterial regulatory protein, Fis family M636_10665 PF00072 Response regulator receiver domain M636_10670 PF02049 Flagellar hook-basal body complex protein FliE M636_10675 PF08345 Flagellar M-ring protein C-terminal M636_10675 PF01514 Secretory protein of YscJ/FliF family M636_10680 PF14841 FliG middle domain M636_10680 PF01706 FliG C-terminal domain M636_10680 PF14842 FliG N-terminal domain M636_10690 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M636_10690 PF18269 T3SS EscN ATPase C-terminal domain M636_10710 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term M636_10710 PF02154 Flagellar motor switch protein FliM M636_10715 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term M636_10720 PF04347 Flagellar biosynthesis protein, FliO M636_10725 PF00813 FliP family M636_10730 PF01313 Bacterial export proteins, family 3 M636_10735 PF01311 Bacterial export proteins, family 1 M636_10740 PF01312 FlhB HrpN YscU SpaS Family M636_10745 PF00771 FHIPEP family M636_10750 PF00448 SRP54-type protein, GTPase domain M636_10755 PF10609 NUBPL iron-transfer P-loop NTPase M636_10760 PF04545 Sigma-70, region 4 M636_10760 PF04539 Sigma-70 region 3 M636_10760 PF04542 Sigma-70 region 2 M636_10765 PF00072 Response regulator receiver domain M636_10770 PF04344 Chemotaxis phosphatase, CheZ M636_10775 PF07194 P2 response regulator binding domain M636_10775 PF01584 CheW-like domain M636_10775 PF01627 Hpt domain M636_10775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_10775 PF02895 Signal transducing histidine kinase, homodimeric domain M636_10780 PF01339 CheB methylesterase M636_10780 PF00072 Response regulator receiver domain M636_10785 PF13614 AAA domain M636_10795 PF01584 CheW-like domain M636_10805 PF00005 ABC transporter M636_10810 PF03379 CcmB protein M636_10815 PF01578 Cytochrome C assembly protein M636_10820 PF04995 Heme exporter protein D (CcmD) M636_10825 PF03100 CcmE M636_10830 PF01578 Cytochrome C assembly protein M636_10830 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal M636_10835 PF08534 Redoxin M636_10840 PF03918 Cytochrome C biogenesis protein M636_10850 PF04333 MlaA lipoprotein M636_10855 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) M636_10860 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) M636_10870 PF04542 Sigma-70 region 2 M636_10870 PF08281 Sigma-70, region 4 M636_10880 PF00108 Thiolase, N-terminal domain M636_10880 PF02803 Thiolase, C-terminal domain M636_10885 PF00378 Enoyl-CoA hydratase/isomerase M636_10885 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M636_10885 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M636_10895 PF16187 Middle or third domain of peptidase_M16 M636_10895 PF05193 Peptidase M16 inactive domain M636_10895 PF00675 Insulinase (Peptidase family M16) M636_10900 PF00300 Histidine phosphatase superfamily (branch 1) M636_10905 PF01713 Smr domain M636_10910 PF05175 Methyltransferase small domain M636_10915 PF01264 Chorismate synthase M636_10920 PF03458 UPF0126 domain M636_10930 PF04315 Elongation factor P hydroxylase M636_10935 PF08891 YfcL protein M636_10940 PF03358 NADPH-dependent FMN reductase M636_10945 PF05430 S-adenosyl-L-methionine-dependent methyltransferase M636_10945 PF01266 FAD dependent oxidoreductase M636_10950 PF02801 Beta-ketoacyl synthase, C-terminal domain M636_10950 PF00109 Beta-ketoacyl synthase, N-terminal domain M636_10955 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M636_10955 PF11890 Domain of unknown function (DUF3410) M636_10955 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M636_10960 PF01118 Semialdehyde dehydrogenase, NAD binding domain M636_10960 PF02774 Semialdehyde dehydrogenase, dimerisation domain M636_10970 PF01416 tRNA pseudouridine synthase M636_10975 PF01039 Carboxyl transferase domain M636_10975 PF17848 Acetyl-coA carboxylase zinc finger domain M636_10980 PF02875 Mur ligase family, glutamate ligase domain M636_10980 PF08245 Mur ligase middle domain M636_10985 PF05036 Sporulation related domain M636_10990 PF02674 Colicin V production protein M636_10995 PF00156 Phosphoribosyl transferase domain M636_11000 PF03466 LysR substrate binding domain M636_11000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_11005 PF00072 Response regulator receiver domain M636_11015 PF04304 Protein of unknown function (DUF454) M636_11020 PF00156 Phosphoribosyl transferase domain M636_11025 PF12170 DNA polymerase III tau subunit V interacting with alpha M636_11025 PF12169 DNA polymerase III subunits gamma and tau domain III M636_11025 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding M636_11030 PF02575 YbaB/EbfC DNA-binding family M636_11035 PF13662 Toprim domain M636_11035 PF02132 RecR protein M636_11040 PF00230 Major intrinsic protein M636_11050 PF01042 Endoribonuclease L-PSP M636_11055 PF03313 Serine dehydratase alpha chain M636_11065 PF03692 Putative zinc- or iron-chelating domain M636_11070 PF04226 Transglycosylase associated protein M636_11075 PF03692 Putative zinc- or iron-chelating domain M636_11080 PF00924 Mechanosensitive ion channel M636_11080 PF05552 Conserved TM helix M636_11090 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M636_11100 PF00245 Alkaline phosphatase M636_11115 PF13847 Methyltransferase domain M636_11120 PF02743 Cache domain M636_11120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M636_11120 PF00672 HAMP domain M636_11125 PF01263 Aldose 1-epimerase M636_11130 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M636_11130 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M636_11135 PF01641 SelR domain M636_11145 PF07023 Protein of unknown function (DUF1315) M636_11150 PF00710 Asparaginase, N-terminal M636_11150 PF17763 Glutaminase/Asparaginase C-terminal domain M636_11155 PF01343 Peptidase family S49 M636_11160 PF07992 Pyridine nucleotide-disulphide oxidoreductase M636_11160 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M636_11165 PF00881 Nitroreductase family M636_11170 PF01751 Toprim domain M636_11170 PF01131 DNA topoisomerase M636_11180 PF00106 short chain dehydrogenase M636_11185 PF00850 Histone deacetylase domain M636_11195 PF11893 Domain of unknown function (DUF3413) M636_11195 PF00884 Sulfatase M636_11200 PF07208 Protein of unknown function (DUF1414) M636_11205 PF04245 37-kD nucleoid-associated bacterial protein M636_11220 PF03553 Na+/H+ antiporter family M636_11225 PF02774 Semialdehyde dehydrogenase, dimerisation domain M636_11225 PF01118 Semialdehyde dehydrogenase, NAD binding domain M636_11230 PF00027 Cyclic nucleotide-binding domain M636_11230 PF00520 Ion transport protein M636_11235 PF01914 MarC family integral membrane protein M636_11240 PF00171 Aldehyde dehydrogenase family M636_11240 PF00465 Iron-containing alcohol dehydrogenase M636_11255 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M636_11255 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M636_11260 PF00462 Glutaredoxin M636_11270 PF13726 Na+-H+ antiporter family M636_11270 PF03553 Na+/H+ antiporter family M636_11275 PF00929 Exonuclease M636_11280 PF00691 OmpA family M636_11280 PF18393 MotY N-terminal domain M636_11285 PF10952 Protein of unknown function (DUF2753) M636_11290 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M636_11295 PF10576 Iron-sulfur binding domain of endonuclease III M636_11295 PF00633 Helix-hairpin-helix motif M636_11295 PF00730 HhH-GPD superfamily base excision DNA repair protein M636_11300 PF02508 Rnf-Nqr subunit, membrane protein M636_11305 PF04205 FMN-binding domain M636_11310 PF03116 NQR2, RnfD, RnfE family M636_11315 PF10531 SLBB domain M636_11315 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit M636_11315 PF12838 4Fe-4S dicluster domain M636_11315 PF13375 RnfC Barrel sandwich hybrid domain M636_11320 PF04060 Putative Fe-S cluster M636_11325 PF02508 Rnf-Nqr subunit, membrane protein M636_11335 PF02151 UvrB/uvrC motif M636_11335 PF04851 Type III restriction enzyme, res subunit M636_11335 PF00271 Helicase conserved C-terminal domain M636_11335 PF17757 UvrB interaction domain M636_11335 PF12344 Ultra-violet resistance protein B M636_11340 PF02954 Bacterial regulatory protein, Fis family M636_11340 PF00158 Sigma-54 interaction domain M636_11340 PF00072 Response regulator receiver domain M636_11345 PF01627 Hpt domain M636_11350 PF01933 Uncharacterised protein family UPF0052 M636_11355 PF06463 Molybdenum Cofactor Synthesis C M636_11355 PF04055 Radical SAM superfamily M636_11360 PF00994 Probable molybdopterin binding domain M636_11365 PF01967 MoaC family M636_11370 PF02597 ThiS family M636_11375 PF02391 MoaE protein M636_11380 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M636_11385 PF00528 Binding-protein-dependent transport system inner membrane component M636_11390 PF00528 Binding-protein-dependent transport system inner membrane component M636_11390 PF12911 N-terminal TM domain of oligopeptide transport permease C M636_11400 PF13409 Glutathione S-transferase, N-terminal domain M636_11410 PF13194 Domain of unknown function (DUF4010) M636_11415 PF07085 DRTGG domain M636_11415 PF01515 Phosphate acetyl/butaryl transferase M636_11420 PF00871 Acetokinase family M636_11425 PF04217 Protein of unknown function, DUF412 M636_11435 PF02653 Branched-chain amino acid transport system / permease component M636_11440 PF00005 ABC transporter M636_11445 PF02903 Alpha amylase, N-terminal ig-like domain M636_11445 PF00128 Alpha amylase, catalytic domain M636_11450 PF00072 Response regulator receiver domain M636_11450 PF00990 Diguanylate cyclase, GGDEF domain M636_11455 PF01207 Dihydrouridine synthase (Dus) M636_11460 PF02810 SEC-C motif M636_11460 PF03695 Uncharacterised protein family (UPF0149) M636_11465 PF02600 Disulfide bond formation protein DsbB M636_11470 PF06450 Bacterial Na+/H+ antiporter B (NhaB) M636_11475 PF07840 FadR C-terminal domain M636_11475 PF00392 Bacterial regulatory proteins, gntR family M636_11485 PF01588 Putative tRNA binding domain M636_11485 PF09334 tRNA synthetases class I (M) M636_11490 PF10609 NUBPL iron-transfer P-loop NTPase M636_11495 PF00485 Phosphoribulokinase / Uridine kinase family M636_11505 PF12557 Cob(I)alamin adenosyltransferase N terminal M636_11505 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP M636_11510 PF01451 Low molecular weight phosphotyrosine protein phosphatase M636_11515 PF01740 STAS domain M636_11515 PF00916 Sulfate permease family M636_11520 PF00575 S1 RNA binding domain M636_11520 PF12111 Polyribonucleotide phosphorylase C terminal M636_11520 PF10150 Ribonuclease E/G family M636_11525 PF01479 S4 domain M636_11525 PF00849 RNA pseudouridylate synthase M636_11530 PF02545 Maf-like protein M636_11535 PF02620 Large ribosomal RNA subunit accumulation protein YceD M636_11540 PF01783 Ribosomal L32p protein family M636_11545 PF02504 Fatty acid synthesis protein M636_11550 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M636_11550 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M636_11555 PF00698 Acyl transferase domain M636_11565 PF00550 Phosphopantetheine attachment site M636_11570 PF02801 Beta-ketoacyl synthase, C-terminal domain M636_11570 PF00109 Beta-ketoacyl synthase, N-terminal domain M636_11575 PF01063 Amino-transferase class IV M636_11580 PF02618 YceG-like family M636_11585 PF02223 Thymidylate kinase M636_11590 PF09115 DNA polymerase III, delta subunit, C terminal M636_11595 PF01026 TatD related DNase M636_11600 PF02378 Phosphotransferase system, EIIC M636_11600 PF00367 phosphotransferase system, EIIB M636_11620 PF00209 Sodium:neurotransmitter symporter family M636_11635 PF01734 Patatin-like phospholipase M636_11640 PF00224 Pyruvate kinase, barrel domain M636_11640 PF02887 Pyruvate kinase, alpha/beta domain M636_11645 PF00480 ROK family M636_11650 PF00072 Response regulator receiver domain M636_11650 PF01584 CheW-like domain M636_11655 PF07733 Bacterial DNA polymerase III alpha NTPase domain M636_11655 PF02811 PHP domain M636_11655 PF14579 Helix-hairpin-helix motif M636_11655 PF01336 OB-fold nucleic acid binding domain M636_11655 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M636_11670 PF00106 short chain dehydrogenase M636_11675 PF08496 Peptidase family S49 N-terminal M636_11675 PF01343 Peptidase family S49 M636_11680 PF02224 Cytidylate kinase M636_11685 PF00575 S1 RNA binding domain M636_11690 PF00216 Bacterial DNA-binding protein M636_11695 PF06305 Lipopolysaccharide assembly protein A domain M636_11700 PF18073 Rubredoxin metal binding domain M636_11705 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M636_11710 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M636_11720 PF01370 NAD dependent epimerase/dehydratase family M636_11725 PF00535 Glycosyl transferase family 2 M636_11735 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase M636_11745 PF02470 MlaD protein M636_11750 PF04403 Paraquat-inducible protein A M636_11755 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M636_11760 PF00034 Cytochrome c M636_11765 PF01568 Molydopterin dinucleotide binding domain M636_11765 PF00384 Molybdopterin oxidoreductase M636_11765 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M636_11770 PF03916 Polysulphide reductase, NrfD M636_11775 PF13247 4Fe-4S dicluster domain M636_11780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_11780 PF00512 His Kinase A (phospho-acceptor) domain M636_11785 PF00072 Response regulator receiver domain M636_11785 PF00196 Bacterial regulatory proteins, luxR family M636_11790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_11790 PF03466 LysR substrate binding domain M636_11800 PF11412 Disulphide bond corrector protein DsbC M636_11800 PF02683 Cytochrome C biogenesis protein transmembrane region M636_11805 PF00085 Thioredoxin M636_11820 PF01938 TRAM domain M636_11820 PF05958 tRNA (Uracil-5-)-methyltransferase M636_11835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M636_11845 PF12704 MacB-like periplasmic core domain M636_11845 PF02687 FtsX-like permease family M636_11845 PF00005 ABC transporter M636_11850 PF00005 ABC transporter M636_11850 PF12704 MacB-like periplasmic core domain M636_11850 PF02687 FtsX-like permease family M636_11855 PF02687 FtsX-like permease family M636_11855 PF00005 ABC transporter M636_11855 PF12704 MacB-like periplasmic core domain M636_11860 PF00857 Isochorismatase family M636_11865 PF02311 AraC-like ligand binding domain M636_11865 PF12833 Helix-turn-helix domain M636_11875 PF08267 Cobalamin-independent synthase, N-terminal domain M636_11875 PF01717 Cobalamin-independent synthase, Catalytic domain M636_11885 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M636_11885 PF00529 HlyD membrane-fusion protein of T1SS M636_11890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_11890 PF03466 LysR substrate binding domain M636_11915 PF00486 Transcriptional regulatory protein, C terminal M636_11915 PF00072 Response regulator receiver domain M636_11920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M636_11920 PF00672 HAMP domain M636_11925 PF04055 Radical SAM superfamily M636_11925 PF08497 Radical SAM N-terminal M636_11925 PF11842 Domain of unknown function (DUF3362) M636_11930 PF00990 Diguanylate cyclase, GGDEF domain M636_11930 PF01590 GAF domain M636_11930 PF00563 EAL domain M636_11930 PF00360 Phytochrome region M636_11945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_11945 PF03466 LysR substrate binding domain M636_11955 PF08267 Cobalamin-independent synthase, N-terminal domain M636_11955 PF01717 Cobalamin-independent synthase, Catalytic domain M636_11965 PF03795 YCII-related domain M636_11970 PF03061 Thioesterase superfamily M636_11975 PF04279 Intracellular septation protein A M636_11985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_11985 PF00072 Response regulator receiver domain M636_11990 PF17327 Acyl homoserine lactone synthase M636_11995 PF00375 Sodium:dicarboxylate symporter family M636_12000 PF13193 AMP-binding enzyme C-terminal domain M636_12000 PF00501 AMP-binding enzyme M636_12005 PF13545 Crp-like helix-turn-helix domain M636_12005 PF00027 Cyclic nucleotide-binding domain M636_12010 PF00290 Tryptophan synthase alpha chain M636_12015 PF00291 Pyridoxal-phosphate dependent enzyme M636_12020 PF00218 Indole-3-glycerol phosphate synthase M636_12020 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase M636_12025 PF02885 Glycosyl transferase family, helical bundle domain M636_12025 PF00591 Glycosyl transferase family, a/b domain M636_12030 PF00117 Glutamine amidotransferase class-I M636_12035 PF04715 Anthranilate synthase component I, N terminal region M636_12035 PF00425 chorismate binding enzyme M636_12040 PF08056 Tryptophan operon leader peptide M636_12045 PF02811 PHP domain M636_12050 PF01300 Telomere recombination M636_12060 PF00849 RNA pseudouridylate synthase M636_12060 PF01479 S4 domain M636_12065 PF04269 Protein of unknown function, DUF440 M636_12070 PF01132 Elongation factor P (EF-P) OB domain M636_12070 PF09285 Elongation factor P, C-terminal M636_12070 PF08207 Elongation factor P (EF-P) KOW-like domain M636_12080 PF03104 DNA polymerase family B, exonuclease domain M636_12080 PF00136 DNA polymerase family B M636_12085 PF00196 Bacterial regulatory proteins, luxR family M636_12085 PF00072 Response regulator receiver domain M636_12090 PF02151 UvrB/uvrC motif M636_12090 PF08459 UvrC Helix-hairpin-helix N-terminal M636_12090 PF01541 GIY-YIG catalytic domain M636_12095 PF01066 CDP-alcohol phosphatidyltransferase M636_12120 PF00202 Aminotransferase class-III M636_12125 PF03435 Saccharopine dehydrogenase NADP binding domain M636_12125 PF16653 Saccharopine dehydrogenase C-terminal domain M636_12130 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M636_12145 PF00994 Probable molybdopterin binding domain M636_12155 PF00268 Ribonucleotide reductase, small chain M636_12160 PF02867 Ribonucleotide reductase, barrel domain M636_12160 PF00317 Ribonucleotide reductase, all-alpha domain M636_12160 PF03477 ATP cone domain M636_12170 PF03989 DNA gyrase C-terminal domain, beta-propeller M636_12170 PF00521 DNA gyrase/topoisomerase IV, subunit A M636_12185 PF02335 Cytochrome c552 M636_12195 PF13247 4Fe-4S dicluster domain M636_12200 PF03916 Polysulphide reductase, NrfD M636_12205 PF01578 Cytochrome C assembly protein M636_12205 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal M636_12210 PF08534 Redoxin M636_12215 PF03918 Cytochrome C biogenesis protein M636_12225 PF00925 GTP cyclohydrolase II M636_12250 PF01471 Putative peptidoglycan binding domain M636_12250 PF03734 L,D-transpeptidase catalytic domain M636_12255 PF05951 Bacterial protein of unknown function (DUF882) M636_12260 PF00753 Metallo-beta-lactamase superfamily M636_12275 PF03480 Bacterial extracellular solute-binding protein, family 7 M636_12285 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M636_12290 PF17200 Single Cache domain 2 M636_12290 PF07730 Histidine kinase M636_12295 PF00072 Response regulator receiver domain M636_12295 PF00196 Bacterial regulatory proteins, luxR family M636_12300 PF01047 MarR family M636_12305 PF02028 BCCT, betaine/carnitine/choline family transporter M636_12310 PF00672 HAMP domain M636_12310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M636_12330 PF00155 Aminotransferase class I and II M636_12345 PF00155 Aminotransferase class I and II M636_12345 PF00392 Bacterial regulatory proteins, gntR family M636_12355 PF01336 OB-fold nucleic acid binding domain M636_12355 PF00152 tRNA synthetases class II (D, K and N) M636_12360 PF00672 HAMP domain M636_12360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M636_12360 PF02743 Cache domain M636_12380 PF17876 Cold shock domain M636_12380 PF00773 RNB domain M636_12380 PF08206 Ribonuclease B OB domain M636_12380 PF00575 S1 RNA binding domain M636_12380 PF08461 Ribonuclease R winged-helix domain M636_12385 PF00313 'Cold-shock' DNA-binding domain M636_12410 PF01242 6-pyruvoyl tetrahydropterin synthase M636_12420 PF00563 EAL domain M636_12420 PF04940 Sensors of blue-light using FAD M636_12425 PF03313 Serine dehydratase alpha chain M636_12425 PF03315 Serine dehydratase beta chain M636_12430 PF03222 Tryptophan/tyrosine permease family M636_12435 PF00293 NUDIX domain M636_12445 PF09308 LuxQ, periplasmic M636_12445 PF00072 Response regulator receiver domain M636_12445 PF00512 His Kinase A (phospho-acceptor) domain M636_12445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_12450 PF04715 Anthranilate synthase component I, N terminal region M636_12450 PF00425 chorismate binding enzyme M636_12465 PF04317 YcjX-like family, DUF463 M636_12470 PF05128 Domain of unknown function (DUF697) M636_12475 PF00158 Sigma-54 interaction domain M636_12475 PF18024 Helix-turn-helix domain M636_12480 PF13302 Acetyltransferase (GNAT) domain M636_12495 PF00589 Phage integrase family M636_12495 PF13495 Phage integrase, N-terminal SAM-like domain M636_12555 PF07516 SecA Wing and Scaffold domain M636_12555 PF01043 SecA preprotein cross-linking domain M636_12555 PF07517 SecA DEAD-like domain M636_12555 PF02810 SEC-C motif M636_12560 PF01926 50S ribosome-binding GTPase M636_12565 PF00583 Acetyltransferase (GNAT) family M636_12690 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M636_12750 PF01555 DNA methylase M636_12870 PF01588 Putative tRNA binding domain M636_12880 PF04828 Glutathione-dependent formaldehyde-activating enzyme M636_12940 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M636_12995 PF01042 Endoribonuclease L-PSP M636_13095 PF05656 Protein of unknown function (DUF805) M636_13100 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M636_13125 PF00665 Integrase core domain M636_13125 PF13333 Integrase core domain M636_13125 PF13276 HTH-like domain M636_13150 PF01810 LysE type translocator M636_13155 PF13302 Acetyltransferase (GNAT) domain M636_13175 PF03553 Na+/H+ antiporter family M636_13180 PF00120 Glutamine synthetase, catalytic domain M636_13185 PF07722 Peptidase C26 M636_13190 PF07883 Cupin domain M636_13190 PF01381 Helix-turn-helix M636_13200 PF00171 Aldehyde dehydrogenase family M636_13205 PF01266 FAD dependent oxidoreductase M636_13210 PF00795 Carbon-nitrogen hydrolase M636_13215 PF04371 Porphyromonas-type peptidyl-arginine deiminase M636_13220 PF00171 Aldehyde dehydrogenase family M636_13225 PF00202 Aminotransferase class-III M636_13230 PF02833 DHHA2 domain M636_13230 PF01368 DHH family M636_13235 PF00563 EAL domain M636_13235 PF00196 Bacterial regulatory proteins, luxR family M636_13250 PF01411 tRNA synthetases class II (A) M636_13250 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M636_13250 PF02272 DHHA1 domain M636_13255 PF12833 Helix-turn-helix domain M636_13265 PF01047 MarR family M636_13270 PF04237 YjbR M636_13280 PF01928 CYTH domain M636_13290 PF12464 Maltose acetyltransferase M636_13290 PF00132 Bacterial transferase hexapeptide (six repeats) M636_13305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_13305 PF00512 His Kinase A (phospho-acceptor) domain M636_13305 PF01627 Hpt domain M636_13305 PF00072 Response regulator receiver domain M636_13305 PF00672 HAMP domain M636_13305 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M636_13310 PF03707 Bacterial signalling protein N terminal repeat M636_13310 PF00990 Diguanylate cyclase, GGDEF domain M636_13310 PF00563 EAL domain M636_13325 PF04204 Homoserine O-succinyltransferase M636_13335 PF13520 Amino acid permease M636_13345 PF03279 Bacterial lipid A biosynthesis acyltransferase M636_13350 PF02074 Carboxypeptidase Taq (M32) metallopeptidase M636_13355 PF01810 LysE type translocator M636_13365 PF01235 Sodium:alanine symporter family M636_13390 PF00884 Sulfatase M636_13395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_13395 PF08521 Two-component sensor kinase N-terminal M636_13395 PF00512 His Kinase A (phospho-acceptor) domain M636_13400 PF00072 Response regulator receiver domain M636_13400 PF00486 Transcriptional regulatory protein, C terminal M636_13420 PF00501 AMP-binding enzyme M636_13430 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M636_13435 PF00528 Binding-protein-dependent transport system inner membrane component M636_13440 PF00571 CBS domain M636_13440 PF00005 ABC transporter M636_13455 PF02028 BCCT, betaine/carnitine/choline family transporter M636_13460 PF00583 Acetyltransferase (GNAT) family M636_13465 PF00202 Aminotransferase class-III M636_13470 PF06339 Ectoine synthase M636_13475 PF00696 Amino acid kinase family M636_13475 PF13840 ACT domain M636_13480 PF00034 Cytochrome c M636_13480 PF03150 Di-haem cytochrome c peroxidase M636_13500 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M636_13515 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain M636_13515 PF17203 Single cache domain 3 M636_13515 PF00989 PAS fold M636_13515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_13520 PF00072 Response regulator receiver domain M636_13520 PF12431 Transcriptional regulator M636_13525 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain M636_13525 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain M636_13530 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase M636_13535 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M636_13535 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain M636_13555 PF00158 Sigma-54 interaction domain M636_13555 PF01590 GAF domain M636_13555 PF02954 Bacterial regulatory protein, Fis family M636_13560 PF00171 Aldehyde dehydrogenase family M636_13580 PF12833 Helix-turn-helix domain M636_13600 PF16697 Inner membrane component of T3SS, cytoplasmic domain M636_13600 PF16693 Inner membrane component of T3SS, periplasmic domain M636_13610 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF M636_13615 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) M636_13625 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI M636_13635 PF02108 Flagellar assembly protein FliH M636_13645 PF02661 Fic/DOC family M636_13675 PF12146 Serine aminopeptidase, S33 M636_13680 PF12146 Serine aminopeptidase, S33 M636_13685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_13685 PF03466 LysR substrate binding domain M636_13690 PF01312 FlhB HrpN YscU SpaS Family M636_13695 PF01311 Bacterial export proteins, family 1 M636_13700 PF01313 Bacterial export proteins, family 3 M636_13705 PF00813 FliP family M636_13710 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term M636_13725 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M636_13725 PF18269 T3SS EscN ATPase C-terminal domain M636_13725 PF02874 ATP synthase alpha/beta family, beta-barrel domain M636_13730 PF07201 HrpJ-like domain M636_13735 PF09059 TyeA M636_13755 PF00771 FHIPEP family M636_13760 PF09621 Type III secretion system regulator (LcrR) M636_13765 PF07216 LcrG protein M636_13770 PF04792 V antigen (LcrV) protein M636_13775 PF07720 Tetratricopeptide repeat M636_13785 PF05844 YopD protein M636_13795 PF01925 Sulfite exporter TauE/SafE M636_13800 PF01970 Tripartite tricarboxylate transporter TctA family M636_13830 PF00285 Citrate synthase, C-terminal domain M636_13835 PF00694 Aconitase C-terminal domain M636_13835 PF00330 Aconitase family (aconitate hydratase) M636_13840 PF04303 PrpF protein M636_13845 PF13193 AMP-binding enzyme C-terminal domain M636_13845 PF16177 Acetyl-coenzyme A synthetase N-terminus M636_13845 PF00501 AMP-binding enzyme M636_13850 PF00583 Acetyltransferase (GNAT) family M636_13855 PF00089 Trypsin M636_13870 PF04055 Radical SAM superfamily M636_13875 PF06508 Queuosine biosynthesis protein QueC M636_13880 PF00990 Diguanylate cyclase, GGDEF domain M636_13880 PF17158 Membrane-associated sensor, integral membrane domain M636_13890 PF05736 OprF membrane domain M636_13890 PF00691 OmpA family M636_13905 PF05736 OprF membrane domain M636_13905 PF00691 OmpA family M636_13920 PF10672 S-adenosylmethionine-dependent methyltransferase M636_13920 PF17785 PUA-like domain M636_13925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M636_13925 PF00672 HAMP domain M636_13925 PF02743 Cache domain M636_13930 PF00708 Acylphosphatase M636_13935 PF04358 DsrC like protein M636_13945 PF01027 Inhibitor of apoptosis-promoting Bax1 M636_13950 PF00005 ABC transporter M636_13955 PF00528 Binding-protein-dependent transport system inner membrane component M636_13960 PF00528 Binding-protein-dependent transport system inner membrane component M636_13965 PF00497 Bacterial extracellular solute-binding proteins, family 3 M636_13970 PF10414 Sirohaem synthase dimerisation region M636_13970 PF14824 Sirohaem biosynthesis protein central M636_13970 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M636_13975 PF04461 Protein of unknown function (DUF520) M636_13980 PF00793 DAHP synthetase I family M636_14000 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF M636_14000 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF M636_14000 PF01189 16S rRNA methyltransferase RsmB/F M636_14005 PF02470 MlaD protein M636_14010 PF04403 Paraquat-inducible protein A M636_14015 PF00005 ABC transporter M636_14015 PF00664 ABC transporter transmembrane region M636_14020 PF13185 GAF domain M636_14025 PF17516 ProQ C-terminal domain M636_14025 PF04352 ProQ/FINO family M636_14030 PF03572 Peptidase family S41 M636_14030 PF00595 PDZ domain M636_14030 PF11818 C-terminal domain of tail specific protease (DUF3340) M636_14030 PF17804 Tail specific protease N-terminal domain M636_14040 PF01433 Peptidase family M1 domain M636_14040 PF17432 Domain of unknown function (DUF3458_C) ARM repeats M636_14040 PF11940 Domain of unknown function (DUF3458) Ig-like fold M636_14045 PF05088 Bacterial NAD-glutamate dehydrogenase M636_14050 PF01180 Dihydroorotate dehydrogenase M636_14055 PF07126 Cell-division protein ZapC M636_14060 PF10672 S-adenosylmethionine-dependent methyltransferase M636_14060 PF01170 Putative RNA methylase family UPF0020 M636_14060 PF02926 THUMP domain M636_14070 PF16326 ABC transporter C-terminal domain M636_14070 PF12848 ABC transporter M636_14070 PF00005 ABC transporter M636_14080 PF04957 Ribosome modulation factor M636_14085 PF07977 FabA-like domain M636_14090 PF13654 AAA domain M636_14090 PF05362 Lon protease (S16) C-terminal proteolytic domain M636_14095 PF17414 MatP C-terminal ribbon-helix-helix domain M636_14095 PF06303 MatP N-terminal domain M636_14110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_14110 PF00512 His Kinase A (phospho-acceptor) domain M636_14110 PF00072 Response regulator receiver domain M636_14110 PF09308 LuxQ, periplasmic M636_14125 PF00115 Cytochrome C and Quinol oxidase polypeptide I M636_14140 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP M636_14140 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M636_14150 PF00403 Heavy-metal-associated domain M636_14165 PF13545 Crp-like helix-turn-helix domain M636_14165 PF00027 Cyclic nucleotide-binding domain M636_14170 PF00582 Universal stress protein family M636_14175 PF01171 PP-loop family M636_14195 PF08402 TOBE domain M636_14195 PF00005 ABC transporter M636_14200 PF00528 Binding-protein-dependent transport system inner membrane component M636_14205 PF00528 Binding-protein-dependent transport system inner membrane component M636_14210 PF13416 Bacterial extracellular solute-binding protein M636_14215 PF13416 Bacterial extracellular solute-binding protein M636_14220 PF02146 Sir2 family M636_14230 PF00909 Ammonium Transporter Family M636_14295 PF13247 4Fe-4S dicluster domain M636_14300 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M636_14300 PF01568 Molydopterin dinucleotide binding domain M636_14300 PF00384 Molybdopterin oxidoreductase M636_14310 PF02613 Nitrate reductase delta subunit M636_14330 PF02634 FdhD/NarQ family M636_14340 PF00005 ABC transporter M636_14340 PF12848 ABC transporter M636_14345 PF00512 His Kinase A (phospho-acceptor) domain M636_14345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_14350 PF00158 Sigma-54 interaction domain M636_14350 PF00072 Response regulator receiver domain M636_14350 PF02954 Bacterial regulatory protein, Fis family M636_14355 PF12849 PBP superfamily domain M636_14360 PF00528 Binding-protein-dependent transport system inner membrane component M636_14365 PF08402 TOBE domain M636_14365 PF00005 ABC transporter M636_14370 PF12804 MobA-like NTP transferase domain M636_14375 PF00994 Probable molybdopterin binding domain M636_14375 PF03454 MoeA C-terminal region (domain IV) M636_14375 PF03453 MoeA N-terminal region (domain I and II) M636_14385 PF00480 ROK family M636_14425 PF17202 Single cache domain 3 M636_14425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M636_14425 PF00672 HAMP domain M636_14430 PF00877 NlpC/P60 family M636_14440 PF05230 MASE2 domain M636_14440 PF00990 Diguanylate cyclase, GGDEF domain M636_14445 PF00072 Response regulator receiver domain M636_14445 PF01339 CheB methylesterase M636_14460 PF00677 Lumazine binding domain M636_14465 PF01554 MatE M636_14475 PF14743 DNA ligase OB-like domain M636_14475 PF01068 ATP dependent DNA ligase domain M636_14480 PF01740 STAS domain M636_14490 PF02563 Polysaccharide biosynthesis/export protein M636_14490 PF10531 SLBB domain M636_14505 PF02954 Bacterial regulatory protein, Fis family M636_14505 PF00158 Sigma-54 interaction domain M636_14505 PF00072 Response regulator receiver domain M636_14515 PF00534 Glycosyl transferases group 1 M636_14515 PF13439 Glycosyltransferase Family 4 M636_14545 PF00534 Glycosyl transferases group 1 M636_14545 PF13439 Glycosyltransferase Family 4 M636_14550 PF00535 Glycosyl transferase family 2 M636_14555 PF02397 Bacterial sugar transferase M636_14570 PF02028 BCCT, betaine/carnitine/choline family transporter M636_14585 PF11898 Domain of unknown function (DUF3418) M636_14585 PF04408 Helicase associated domain (HA2) M636_14585 PF00270 DEAD/DEAH box helicase M636_14585 PF00271 Helicase conserved C-terminal domain M636_14585 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold M636_14590 PF02525 Flavodoxin-like fold M636_14600 PF02613 Nitrate reductase delta subunit M636_14605 PF04976 DMSO reductase anchor subunit (DmsC) M636_14610 PF13247 4Fe-4S dicluster domain M636_14610 PF12800 4Fe-4S binding domain M636_14615 PF01568 Molydopterin dinucleotide binding domain M636_14615 PF00384 Molybdopterin oxidoreductase M636_14615 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M636_14645 PF00990 Diguanylate cyclase, GGDEF domain M636_14645 PF17158 Membrane-associated sensor, integral membrane domain M636_14655 PF00012 Hsp70 protein M636_14660 PF00012 Hsp70 protein M636_14685 PF00005 ABC transporter M636_14685 PF00664 ABC transporter transmembrane region M636_14690 PF00005 ABC transporter M636_14690 PF00664 ABC transporter transmembrane region M636_14710 PF03222 Tryptophan/tyrosine permease family M636_14715 PF00465 Iron-containing alcohol dehydrogenase M636_14720 PF01966 HD domain M636_14805 PF01037 Lrp/AsnC ligand binding domain M636_14840 PF00069 Protein kinase domain M636_14865 PF04717 Type VI secretion system, phage-baseplate injector M636_14870 PF05638 Type VI secretion system effector, Hcp M636_14875 PF10431 C-terminal, D2-small domain, of ClpB protein M636_14875 PF17871 AAA lid domain M636_14875 PF00004 ATPase family associated with various cellular activities (AAA) M636_14875 PF07724 AAA domain (Cdc48 subfamily) M636_14880 PF00158 Sigma-54 interaction domain M636_14880 PF02954 Bacterial regulatory protein, Fis family M636_14905 PF01551 Peptidase family M23 M636_14905 PF08525 Opacity-associated protein A N-terminal motif M636_14905 PF01476 LysM domain M636_14910 PF03741 Integral membrane protein TerC family M636_14920 PF04055 Radical SAM superfamily M636_14925 PF11230 Protein of unknown function (DUF3029) M636_14930 PF01810 LysE type translocator M636_14935 PF11871 Domain of unknown function (DUF3391) M636_14935 PF01966 HD domain M636_14940 PF00563 EAL domain M636_14940 PF00990 Diguanylate cyclase, GGDEF domain M636_14940 PF03707 Bacterial signalling protein N terminal repeat M636_14945 PF02954 Bacterial regulatory protein, Fis family M636_14945 PF00072 Response regulator receiver domain M636_14945 PF00158 Sigma-54 interaction domain M636_14955 PF00939 Sodium:sulfate symporter transmembrane region M636_14970 PF00300 Histidine phosphatase superfamily (branch 1) M636_14990 PF03466 LysR substrate binding domain M636_14990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_14995 PF08543 Phosphomethylpyrimidine kinase M636_15015 PF13533 Biotin-lipoyl like M636_15060 PF02798 Glutathione S-transferase, N-terminal domain M636_15060 PF14497 Glutathione S-transferase, C-terminal domain M636_15070 PF04209 homogentisate 1,2-dioxygenase M636_15075 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M636_15085 PF07687 Peptidase dimerisation domain M636_15085 PF01546 Peptidase family M20/M25/M40 M636_15090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M636_15095 PF00528 Binding-protein-dependent transport system inner membrane component M636_15100 PF12911 N-terminal TM domain of oligopeptide transport permease C M636_15100 PF00528 Binding-protein-dependent transport system inner membrane component M636_15115 PF01752 Collagenase M636_15115 PF08453 Peptidase family M9 N-terminal M636_15125 PF00528 Binding-protein-dependent transport system inner membrane component M636_15130 PF00528 Binding-protein-dependent transport system inner membrane component M636_15135 PF08402 TOBE domain M636_15135 PF00005 ABC transporter M636_15140 PF00701 Dihydrodipicolinate synthetase family M636_15145 PF02423 Ornithine cyclodeaminase/mu-crystallin family M636_15160 PF05544 Proline racemase M636_15165 PF00171 Aldehyde dehydrogenase family M636_15170 PF00392 Bacterial regulatory proteins, gntR family M636_15190 PF05971 RNA methyltransferase M636_15195 PF01863 Protein of unknown function DUF45 M636_15200 PF04991 LicD family M636_15205 PF16363 GDP-mannose 4,6 dehydratase M636_15210 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase M636_15230 PF03466 LysR substrate binding domain M636_15230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_15250 PF00005 ABC transporter M636_15255 PF01032 FecCD transport family M636_15260 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family M636_15270 PF00300 Histidine phosphatase superfamily (branch 1) M636_15275 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase M636_15280 PF02654 Cobalamin-5-phosphate synthase M636_15285 PF02277 Phosphoribosyltransferase M636_15290 PF13460 NAD(P)H-binding M636_15300 PF08411 Exonuclease C-terminal M636_15300 PF00929 Exonuclease M636_15305 PF03788 LrgA family M636_15310 PF04172 LrgB-like family M636_15315 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region M636_15315 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M636_15320 PF02222 ATP-grasp domain M636_15325 PF05724 Thiopurine S-methyltransferase (TPMT) M636_15335 PF00216 Bacterial DNA-binding protein M636_15345 PF01588 Putative tRNA binding domain M636_15345 PF03483 B3/4 domain M636_15345 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain M636_15345 PF03484 tRNA synthetase B5 domain M636_15345 PF03147 Ferredoxin-fold anticodon binding domain M636_15350 PF01409 tRNA synthetases class II core domain (F) M636_15350 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain M636_15355 PF00990 Diguanylate cyclase, GGDEF domain M636_15355 PF17158 Membrane-associated sensor, integral membrane domain M636_15385 PF01906 Putative heavy-metal-binding M636_15390 PF00453 Ribosomal protein L20 M636_15395 PF01632 Ribosomal protein L35 M636_15400 PF05198 Translation initiation factor IF-3, N-terminal domain M636_15400 PF00707 Translation initiation factor IF-3, C-terminal domain M636_15405 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M636_15405 PF02824 TGS domain M636_15405 PF03129 Anticodon binding domain M636_15405 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M636_15420 PF00392 Bacterial regulatory proteins, gntR family M636_15420 PF07702 UTRA domain M636_15425 PF01979 Amidohydrolase family M636_15430 PF00491 Arginase family M636_15435 PF17391 Urocanase N-terminal domain M636_15435 PF17392 Urocanase C-terminal domain M636_15435 PF01175 Urocanase Rossmann-like domain M636_15440 PF00221 Aromatic amino acid lyase M636_15455 PF13183 4Fe-4S dicluster domain M636_15455 PF01565 FAD binding domain M636_15455 PF02913 FAD linked oxidases, C-terminal domain M636_15470 PF05736 OprF membrane domain M636_15470 PF00691 OmpA family M636_15490 PF01259 SAICAR synthetase M636_15495 PF09423 PhoD-like phosphatase M636_15495 PF16655 PhoD-like phosphatase, N-terminal domain M636_15505 PF02253 Phospholipase A1 M636_15510 PF04408 Helicase associated domain (HA2) M636_15510 PF00271 Helicase conserved C-terminal domain M636_15510 PF00270 DEAD/DEAH box helicase M636_15510 PF08482 ATP-dependent helicase C-terminal M636_15515 PF03949 Malic enzyme, NAD binding domain M636_15515 PF00390 Malic enzyme, N-terminal domain M636_15520 PF02698 DUF218 domain M636_15525 PF00939 Sodium:sulfate symporter transmembrane region M636_15530 PF00990 Diguanylate cyclase, GGDEF domain M636_15530 PF00072 Response regulator receiver domain M636_15540 PF00266 Aminotransferase class-V M636_15550 PF07992 Pyridine nucleotide-disulphide oxidoreductase M636_15555 PF00005 ABC transporter M636_15555 PF00664 ABC transporter transmembrane region M636_15560 PF00664 ABC transporter transmembrane region M636_15560 PF00005 ABC transporter M636_15565 PF00291 Pyridoxal-phosphate dependent enzyme M636_15570 PF00266 Aminotransferase class-V M636_15580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_15580 PF00512 His Kinase A (phospho-acceptor) domain M636_15580 PF00497 Bacterial extracellular solute-binding proteins, family 3 M636_15595 PF04994 TfoX C-terminal domain M636_15595 PF04993 TfoX N-terminal domain M636_15610 PF03956 Lysine exporter LysO M636_15620 PF00282 Pyridoxal-dependent decarboxylase conserved domain M636_15625 PF01418 Helix-turn-helix domain, rpiR family M636_15625 PF01380 SIS domain M636_15630 PF00465 Iron-containing alcohol dehydrogenase M636_15635 PF00462 Glutaredoxin M636_15640 PF06826 Predicted Permease Membrane Region M636_15640 PF02080 TrkA-C domain M636_15645 PF12241 Trans-2-enoyl-CoA reductase catalytic region M636_15645 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase M636_15645 PF07055 Enoyl reductase FAD binding domain M636_15650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M636_15650 PF02770 Acyl-CoA dehydrogenase, middle domain M636_15650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M636_15650 PF09317 Domain of unknown function (DUF1974) M636_15655 PF00440 Bacterial regulatory proteins, tetR family M636_15655 PF16295 Tetracyclin repressor-like, C-terminal domain M636_15660 PF06965 Na+/H+ antiporter 1 M636_15675 PF00005 ABC transporter M636_15680 PF01554 MatE M636_15685 PF13460 NAD(P)H-binding M636_15685 PF11066 Protein of unknown function (DUF2867) M636_15690 PF03264 NapC/NirT cytochrome c family, N-terminal region M636_15705 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) M636_15710 PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB M636_15720 PF07690 Major Facilitator Superfamily M636_15725 PF01479 S4 domain M636_15725 PF00849 RNA pseudouridylate synthase M636_15730 PF00271 Helicase conserved C-terminal domain M636_15730 PF04851 Type III restriction enzyme, res subunit M636_15740 PF00072 Response regulator receiver domain M636_15740 PF00486 Transcriptional regulatory protein, C terminal M636_15745 PF00512 His Kinase A (phospho-acceptor) domain M636_15745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_15745 PF00672 HAMP domain M636_15750 PF01386 Ribosomal L25p family M636_15765 PF00149 Calcineurin-like phosphoesterase M636_15765 PF02872 5'-nucleotidase, C-terminal domain M636_15775 PF06945 Protein of unknown function (DUF1289) M636_15785 PF00072 Response regulator receiver domain M636_15785 PF00196 Bacterial regulatory proteins, luxR family M636_15790 PF00512 His Kinase A (phospho-acceptor) domain M636_15790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_15800 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M636_15800 PF07992 Pyridine nucleotide-disulphide oxidoreductase M636_15810 PF09335 SNARE associated Golgi protein M636_15815 PF13416 Bacterial extracellular solute-binding protein M636_15820 PF00528 Binding-protein-dependent transport system inner membrane component M636_15825 PF00005 ABC transporter M636_15830 PF01066 CDP-alcohol phosphatidyltransferase M636_15840 PF01590 GAF domain M636_15840 PF00158 Sigma-54 interaction domain M636_15845 PF03063 Prismane/CO dehydrogenase family M636_15850 PF00970 Oxidoreductase FAD-binding domain M636_15850 PF00111 2Fe-2S iron-sulfur cluster binding domain M636_15850 PF00175 Oxidoreductase NAD-binding domain M636_15860 PF00849 RNA pseudouridylate synthase M636_15865 PF12729 Four helix bundle sensory module for signal transduction M636_15865 PF00672 HAMP domain M636_15865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M636_15870 PF00209 Sodium:neurotransmitter symporter family M636_15875 PF13396 Phospholipase_D-nuclease N-terminal M636_15875 PF13091 PLD-like domain M636_15880 PF01053 Cys/Met metabolism PLP-dependent enzyme M636_15885 PF00561 alpha/beta hydrolase fold M636_15890 PF03280 Proteobacterial lipase chaperone protein M636_15895 PF03352 Methyladenine glycosylase M636_15900 PF00873 AcrB/AcrD/AcrF family M636_15905 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M636_15910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M636_15915 PF04024 PspC domain M636_15920 PF06667 Phage shock protein B M636_15925 PF04012 PspA/IM30 family M636_15930 PF00158 Sigma-54 interaction domain M636_15930 PF02954 Bacterial regulatory protein, Fis family M636_15935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M636_15940 PF00528 Binding-protein-dependent transport system inner membrane component M636_15945 PF00528 Binding-protein-dependent transport system inner membrane component M636_15945 PF12911 N-terminal TM domain of oligopeptide transport permease C M636_15950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M636_15950 PF00005 ABC transporter M636_15955 PF00005 ABC transporter M636_15965 PF01368 DHH family M636_15965 PF02833 DHHA2 domain M636_15980 PF18364 Molybdopterin oxidoreductase N-terminal domain M636_15980 PF01568 Molydopterin dinucleotide binding domain M636_15980 PF00384 Molybdopterin oxidoreductase M636_15985 PF03264 NapC/NirT cytochrome c family, N-terminal region M636_15990 PF06796 Periplasmic nitrate reductase protein NapE M636_15995 PF03649 Uncharacterised protein family (UPF0014) M636_16005 PF01226 Formate/nitrite transporter M636_16030 PF02698 DUF218 domain M636_16035 PF00265 Thymidine kinase M636_16040 PF09190 DALR domain M636_16040 PF01406 tRNA synthetases class I (C) catalytic domain M636_16045 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M636_16050 PF00149 Calcineurin-like phosphoesterase M636_16055 PF00563 EAL domain M636_16055 PF08668 HDOD domain M636_16060 PF02810 SEC-C motif M636_16065 PF01502 Phosphoribosyl-AMP cyclohydrolase M636_16065 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase M636_16070 PF00977 Histidine biosynthesis protein M636_16075 PF00977 Histidine biosynthesis protein M636_16080 PF00117 Glutamine amidotransferase class-I M636_16085 PF08645 Polynucleotide kinase 3 phosphatase M636_16085 PF00475 Imidazoleglycerol-phosphate dehydratase M636_16090 PF00155 Aminotransferase class I and II M636_16095 PF00815 Histidinol dehydrogenase M636_16100 PF08029 HisG, C-terminal domain M636_16100 PF01634 ATP phosphoribosyltransferase M636_16105 PF00158 Sigma-54 interaction domain M636_16105 PF02954 Bacterial regulatory protein, Fis family M636_16105 PF00072 Response regulator receiver domain M636_16115 PF03553 Na+/H+ antiporter family M636_16120 PF00816 H-NS histone family M636_16125 PF00294 pfkB family carbohydrate kinase M636_16140 PF04356 Protein of unknown function (DUF489) M636_16145 PF00206 Lyase M636_16145 PF08328 Adenylosuccinate lyase C-terminal M636_16180 PF00106 short chain dehydrogenase M636_16190 PF01435 Peptidase family M48 M636_16205 PF08241 Methyltransferase domain M636_16210 PF00155 Aminotransferase class I and II M636_16215 PF06968 Biotin and Thiamin Synthesis associated domain M636_16215 PF04055 Radical SAM superfamily M636_16220 PF00202 Aminotransferase class-III M636_16225 PF01258 Prokaryotic dksA/traR C4-type zinc finger M636_16240 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M636_16240 PF02403 Seryl-tRNA synthetase N-terminal domain M636_16245 PF12002 MgsA AAA+ ATPase C terminal M636_16245 PF16193 AAA C-terminal domain M636_16245 PF00004 ATPase family associated with various cellular activities (AAA) M636_16250 PF03548 Outer membrane lipoprotein carrier protein LolA M636_16255 PF13491 4TM region of DNA translocase FtsK/SpoIIIE M636_16255 PF17854 FtsK alpha domain M636_16255 PF09397 Ftsk gamma domain M636_16255 PF01580 FtsK/SpoIIIE family M636_16260 PF01037 Lrp/AsnC ligand binding domain M636_16265 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M636_16265 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M636_16275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_16275 PF03466 LysR substrate binding domain M636_16285 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) M636_16290 PF03372 Endonuclease/Exonuclease/phosphatase family M636_16300 PF00579 tRNA synthetases class I (W and Y) M636_16320 PF00873 AcrB/AcrD/AcrF family M636_16325 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M636_16325 PF00529 HlyD membrane-fusion protein of T1SS M636_16330 PF02743 Cache domain M636_16330 PF00672 HAMP domain M636_16330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M636_16340 PF06610 L-alanine exporter M636_16345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_16345 PF00072 Response regulator receiver domain M636_16345 PF00512 His Kinase A (phospho-acceptor) domain M636_16345 PF09308 LuxQ, periplasmic M636_16355 PF03738 Glutathionylspermidine synthase preATP-grasp M636_16365 PF03994 Domain of Unknown Function (DUF350) M636_16375 PF02445 Quinolinate synthetase A protein M636_16380 PF13174 Tetratricopeptide repeat M636_16380 PF16331 TolA binding protein trimerisation M636_16385 PF00691 OmpA family M636_16390 PF04052 TolB amino-terminal domain M636_16390 PF07676 WD40-like Beta Propeller Repeat M636_16400 PF02472 Biopolymer transport protein ExbD/TolR M636_16405 PF01618 MotA/TolQ/ExbB proton channel family M636_16410 PF03061 Thioesterase superfamily M636_16420 PF08173 Membrane bound YbgT-like protein M636_16425 PF02322 Cytochrome bd terminal oxidase subunit II M636_16430 PF01654 Cytochrome bd terminal oxidase subunit I M636_16435 PF17864 RuvB AAA lid domain M636_16435 PF05496 Holliday junction DNA helicase RuvB P-loop domain M636_16435 PF05491 RuvB C-terminal winged helix domain M636_16440 PF07499 RuvA, C-terminal domain M636_16440 PF01330 RuvA N terminal domain M636_16455 PF02075 Crossover junction endodeoxyribonuclease RuvC M636_16460 PF01336 OB-fold nucleic acid binding domain M636_16460 PF00152 tRNA synthetases class II (D, K and N) M636_16460 PF02938 GAD domain M636_16465 PF01904 Protein of unknown function DUF72 M636_16470 PF13649 Methyltransferase domain M636_16475 PF08003 Protein of unknown function (DUF1698) M636_16480 PF08443 RimK-like ATP-grasp domain M636_16480 PF18030 RimK PreATP-grasp domain M636_16490 PF18030 RimK PreATP-grasp domain M636_16490 PF08443 RimK-like ATP-grasp domain M636_16500 PF16330 MukB hinge domain M636_16500 PF04310 MukB N-terminal M636_16505 PF04288 MukE-like family M636_16510 PF17193 MukF C-terminal domain M636_16510 PF17192 MukF middle domain M636_16510 PF03882 MukF winged-helix domain M636_16520 PF02698 DUF218 domain M636_16525 PF00072 Response regulator receiver domain M636_16525 PF00486 Transcriptional regulatory protein, C terminal M636_16530 PF02613 Nitrate reductase delta subunit M636_16535 PF00356 Bacterial regulatory proteins, lacI family M636_16545 PF04993 TfoX N-terminal domain M636_16545 PF04994 TfoX C-terminal domain M636_16565 PF08323 Starch synthase catalytic domain M636_16565 PF00534 Glycosyl transferases group 1 M636_16570 PF00483 Nucleotidyl transferase M636_16575 PF01396 Topoisomerase DNA binding C4 zinc finger M636_16575 PF08272 Topoisomerase I zinc-ribbon-like M636_16575 PF01131 DNA topoisomerase M636_16575 PF01751 Toprim domain M636_16580 PF10692 Protein of unknown function (DUF2498) M636_16585 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M636_16595 PF03588 Leucyl/phenylalanyl-tRNA protein transferase M636_16600 PF04376 Arginine-tRNA-protein transferase, N terminus M636_16600 PF04377 Arginine-tRNA-protein transferase, C terminus M636_16605 PF01176 Translation initiation factor 1A / IF-1 M636_16615 PF00004 ATPase family associated with various cellular activities (AAA) M636_16615 PF17871 AAA lid domain M636_16615 PF02861 Clp amino terminal domain, pathogenicity island component M636_16615 PF10431 C-terminal, D2-small domain, of ClpB protein M636_16615 PF07724 AAA domain (Cdc48 subfamily) M636_16620 PF02617 ATP-dependent Clp protease adaptor protein ClpS M636_16625 PF00313 'Cold-shock' DNA-binding domain M636_16630 PF03971 Monomeric isocitrate dehydrogenase M636_16635 PF00849 RNA pseudouridylate synthase M636_16640 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) M636_16650 PF13307 Helicase C-terminal domain M636_16650 PF06733 DEAD_2 M636_16655 PF01925 Sulfite exporter TauE/SafE M636_16660 PF07445 Primosomal replication protein priC M636_16665 PF10689 Protein of unknown function (DUF2496) M636_16670 PF03372 Endonuclease/Exonuclease/phosphatase family M636_16680 PF00528 Binding-protein-dependent transport system inner membrane component M636_16685 PF00528 Binding-protein-dependent transport system inner membrane component M636_16690 PF00497 Bacterial extracellular solute-binding proteins, family 3 M636_16695 PF00005 ABC transporter M636_16710 PF02901 Pyruvate formate lyase-like M636_16710 PF01228 Glycine radical M636_16720 PF04055 Radical SAM superfamily M636_16730 PF03887 YfbU domain M636_16735 PF08298 PrkA AAA domain M636_16735 PF06798 PrkA serine protein kinase C-terminal domain M636_16740 PF04285 Protein of unknown function (DUF444) M636_16745 PF04293 SpoVR like protein M636_16750 PF02348 Cytidylyltransferase M636_16755 PF03966 Trm112p-like protein M636_16760 PF02606 Tetraacyldisaccharide-1-P 4'-kinase M636_16765 PF00664 ABC transporter transmembrane region M636_16765 PF00005 ABC transporter M636_16770 PF13567 Domain of unknown function (DUF4131) M636_16770 PF03772 Competence protein M636_16770 PF00753 Metallo-beta-lactamase superfamily M636_16780 PF12704 MacB-like periplasmic core domain M636_16780 PF02687 FtsX-like permease family M636_16785 PF00005 ABC transporter M636_16790 PF02687 FtsX-like permease family M636_16790 PF12704 MacB-like periplasmic core domain M636_16800 PF03461 TRCF domain M636_16800 PF00271 Helicase conserved C-terminal domain M636_16800 PF17757 UvrB interaction domain M636_16800 PF02559 CarD-like/TRCF domain M636_16800 PF00270 DEAD/DEAH box helicase M636_16815 PF07992 Pyridine nucleotide-disulphide oxidoreductase M636_16820 PF05728 Uncharacterised protein family (UPF0227) M636_16830 PF08139 Prokaryotic membrane lipoprotein lipid attachment site M636_16830 PF13036 Peptidoglycan-synthase activator LpoB M636_16845 PF01230 HIT domain M636_16850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M636_16850 PF00672 HAMP domain M636_16860 PF01048 Phosphorylase superfamily M636_16865 PF00403 Heavy-metal-associated domain M636_16870 PF00478 IMP dehydrogenase / GMP reductase domain M636_16870 PF00571 CBS domain M636_16880 PF00037 4Fe-4S binding domain M636_16880 PF11953 Domain of unknown function (DUF3470) M636_16885 PF00588 SpoU rRNA Methylase family M636_16885 PF08032 RNA 2'-O ribose methyltransferase substrate binding M636_16890 PF00990 Diguanylate cyclase, GGDEF domain M636_16890 PF17152 Periplasmic sensor domain M636_16900 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M636_16905 PF09619 Type III secretion system lipoprotein chaperone (YscW) M636_16920 PF01037 Lrp/AsnC ligand binding domain M636_16920 PF13404 AsnC-type helix-turn-helix domain M636_16925 PF00291 Pyridoxal-phosphate dependent enzyme M636_16945 PF00873 AcrB/AcrD/AcrF family M636_16950 PF13533 Biotin-lipoyl like M636_16995 PF07690 Major Facilitator Superfamily M636_17000 PF03601 Conserved hypothetical protein 698 M636_17010 PF13193 AMP-binding enzyme C-terminal domain M636_17010 PF00501 AMP-binding enzyme M636_17015 PF13378 Enolase C-terminal domain-like M636_17020 PF00378 Enoyl-CoA hydratase/isomerase M636_17025 PF12697 Alpha/beta hydrolase family M636_17030 PF16582 Middle domain of thiamine pyrophosphate M636_17030 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M636_17030 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M636_17035 PF00425 chorismate binding enzyme M636_17040 PF00155 Aminotransferase class I and II M636_17050 PF13286 Phosphohydrolase-associated domain M636_17050 PF01966 HD domain M636_17070 PF13145 PPIC-type PPIASE domain M636_17075 PF00216 Bacterial DNA-binding protein M636_17080 PF02190 ATP-dependent protease La (LON) substrate-binding domain M636_17080 PF05362 Lon protease (S16) C-terminal proteolytic domain M636_17080 PF00004 ATPase family associated with various cellular activities (AAA) M636_17085 PF06689 ClpX C4-type zinc finger M636_17085 PF10431 C-terminal, D2-small domain, of ClpB protein M636_17085 PF07724 AAA domain (Cdc48 subfamily) M636_17090 PF00574 Clp protease M636_17095 PF05697 Bacterial trigger factor protein (TF) M636_17095 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M636_17095 PF05698 Bacterial trigger factor protein (TF) C-terminus M636_17105 PF02743 Cache domain M636_17105 PF00512 His Kinase A (phospho-acceptor) domain M636_17105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_17110 PF00072 Response regulator receiver domain M636_17110 PF00158 Sigma-54 interaction domain M636_17110 PF02954 Bacterial regulatory protein, Fis family M636_17120 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M636_17125 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component M636_17130 PF03480 Bacterial extracellular solute-binding protein, family 7 M636_17135 PF02696 Uncharacterized ACR, YdiU/UPF0061 family M636_17150 PF02386 Cation transport protein M636_17155 PF02080 TrkA-C domain M636_17155 PF02254 TrkA-N domain M636_17160 PF00270 DEAD/DEAH box helicase M636_17160 PF00271 Helicase conserved C-terminal domain M636_17165 PF00571 CBS domain M636_17165 PF03471 Transporter associated domain M636_17165 PF01595 Cyclin M transmembrane N-terminal domain M636_17175 PF04820 Tryptophan halogenase M636_17200 PF00550 Phosphopantetheine attachment site M636_17205 PF00550 Phosphopantetheine attachment site M636_17220 PF07977 FabA-like domain M636_17225 PF00535 Glycosyl transferase family 2 M636_17230 PF00221 Aromatic amino acid lyase M636_17255 PF00109 Beta-ketoacyl synthase, N-terminal domain M636_17255 PF02801 Beta-ketoacyl synthase, C-terminal domain M636_17260 PF07977 FabA-like domain M636_17270 PF00109 Beta-ketoacyl synthase, N-terminal domain M636_17270 PF02801 Beta-ketoacyl synthase, C-terminal domain M636_17305 PF13361 UvrD-like helicase C-terminal domain M636_17305 PF12462 DNA helicase IV / RNA helicase N terminal M636_17305 PF00580 UvrD/REP helicase N-terminal domain M636_17315 PF13175 AAA ATPase domain M636_17340 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) M636_17350 PF01381 Helix-turn-helix M636_17360 PF07804 HipA-like C-terminal domain M636_17360 PF13657 HipA N-terminal domain M636_17380 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) M636_17400 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain M636_17400 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain M636_17405 PF07670 Nucleoside recognition M636_17405 PF07662 Na+ dependent nucleoside transporter C-terminus M636_17405 PF01773 Na+ dependent nucleoside transporter N-terminus M636_17410 PF03466 LysR substrate binding domain M636_17410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_17415 PF13406 Transglycosylase SLT domain M636_17420 PF05166 YcgL domain M636_17425 PF03775 Septum formation inhibitor MinC, C-terminal domain M636_17425 PF05209 Septum formation inhibitor MinC, N-terminal domain M636_17430 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain M636_17435 PF03776 Septum formation topological specificity factor MinE M636_17440 PF01612 3'-5' exonuclease M636_17440 PF00570 HRDC domain M636_17445 PF00501 AMP-binding enzyme M636_17445 PF13193 AMP-binding enzyme C-terminal domain M636_17450 PF00561 alpha/beta hydrolase fold M636_17465 PF00814 Glycoprotease family M636_17470 PF04851 Type III restriction enzyme, res subunit M636_17470 PF13307 Helicase C-terminal domain M636_17475 PF00551 Formyl transferase M636_17475 PF01842 ACT domain M636_17485 PF03485 Arginyl tRNA synthetase N terminal domain M636_17485 PF05746 DALR anticodon binding domain M636_17485 PF00750 tRNA synthetases class I (R) M636_17500 PF07670 Nucleoside recognition M636_17500 PF02421 Ferrous iron transport protein B M636_17500 PF17910 FeoB cytosolic helical domain M636_17500 PF07664 Ferrous iron transport protein B C terminus M636_17505 PF04023 FeoA domain M636_17515 PF12833 Helix-turn-helix domain M636_17515 PF02311 AraC-like ligand binding domain M636_17520 PF01297 Zinc-uptake complex component A periplasmic M636_17525 PF00005 ABC transporter M636_17530 PF00950 ABC 3 transport family M636_17535 PF02629 CoA binding domain M636_17535 PF00549 CoA-ligase M636_17540 PF00549 CoA-ligase M636_17540 PF08442 ATP-grasp domain M636_17545 PF00364 Biotin-requiring enzyme M636_17545 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M636_17545 PF02817 e3 binding domain M636_17550 PF16078 2-oxoglutarate dehydrogenase N-terminus M636_17550 PF16870 2-oxoglutarate dehydrogenase C-terminal M636_17550 PF00676 Dehydrogenase E1 component M636_17550 PF02779 Transketolase, pyrimidine binding domain M636_17555 PF13085 2Fe-2S iron-sulfur cluster binding domain M636_17560 PF00890 FAD binding domain M636_17560 PF02910 Fumarate reductase flavoprotein C-term M636_17565 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M636_17570 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M636_17575 PF00285 Citrate synthase, C-terminal domain M636_17580 PF01784 NIF3 (NGG1p interacting factor 3) M636_17590 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M636_17590 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M636_17590 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M636_17590 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M636_17595 PF17206 SeqA protein N-terminal domain M636_17595 PF03925 SeqA protein C-terminal domain M636_17600 PF12697 Alpha/beta hydrolase family M636_17610 PF00258 Flavodoxin M636_17615 PF02774 Semialdehyde dehydrogenase, dimerisation domain M636_17615 PF01118 Semialdehyde dehydrogenase, NAD binding domain M636_17620 PF01475 Ferric uptake regulator family M636_17625 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain M636_17625 PF00749 tRNA synthetases class I (E and Q), catalytic domain M636_17630 PF02378 Phosphotransferase system, EIIC M636_17630 PF00367 phosphotransferase system, EIIB M636_17630 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M636_17635 PF01979 Amidohydrolase family M636_17640 PF00480 ROK family M636_17640 PF01047 MarR family M636_17645 PF02254 TrkA-N domain M636_17645 PF00999 Sodium/hydrogen exchanger family M636_17650 PF00733 Asparagine synthase M636_17650 PF13537 Glutamine amidotransferase domain M636_17655 PF02357 Transcription termination factor nusG M636_17660 PF00854 POT family M636_17665 PF00762 Ferrochelatase M636_17670 PF05191 Adenylate kinase, active site lid M636_17675 PF00183 Hsp90 protein M636_17675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_17680 PF00486 Transcriptional regulatory protein, C terminal M636_17685 PF17323 Trans-membrane regulatory protein ToxS M636_17700 PF12850 Calcineurin-like phosphoesterase superfamily domain M636_17715 PF07556 Protein of unknown function (DUF1538) M636_17720 PF07556 Protein of unknown function (DUF1538) M636_17725 PF08338 Domain of unknown function (DUF1731) M636_17725 PF01370 NAD dependent epimerase/dehydratase family M636_17730 PF00106 short chain dehydrogenase M636_17735 PF00085 Thioredoxin M636_17740 PF01145 SPFH domain / Band 7 family M636_17740 PF16200 C-terminal region of band_7 M636_17750 PF03573 outer membrane porin, OprD family M636_17760 PF12826 Helix-hairpin-helix motif M636_17760 PF00533 BRCA1 C Terminus (BRCT) domain M636_17760 PF03120 NAD-dependent DNA ligase OB-fold domain M636_17760 PF03119 NAD-dependent DNA ligase C4 zinc finger domain M636_17760 PF01653 NAD-dependent DNA ligase adenylation domain M636_17765 PF04354 ZipA, C-terminal FtsZ-binding domain M636_17775 PF00291 Pyridoxal-phosphate dependent enzyme M636_17780 PF00381 PTS HPr component phosphorylation site M636_17785 PF05524 PEP-utilising enzyme, N-terminal M636_17785 PF00391 PEP-utilising enzyme, mobile domain M636_17785 PF02896 PEP-utilising enzyme, TIM barrel domain M636_17790 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M636_17795 PF00669 Bacterial flagellin N-terminal helical region M636_17795 PF07196 Flagellin hook IN motif M636_17795 PF00700 Bacterial flagellin C-terminal helical region M636_17800 PF00669 Bacterial flagellin N-terminal helical region M636_17800 PF00700 Bacterial flagellin C-terminal helical region M636_17800 PF07196 Flagellin hook IN motif M636_17810 PF00669 Bacterial flagellin N-terminal helical region M636_17810 PF07196 Flagellin hook IN motif M636_17810 PF00700 Bacterial flagellin C-terminal helical region M636_17815 PF00669 Bacterial flagellin N-terminal helical region M636_17820 PF07196 Flagellin hook IN motif M636_17820 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M636_17825 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase M636_17825 PF10135 Rod binding protein M636_17830 PF02119 Flagellar P-ring protein M636_17835 PF02107 Flagellar L-ring protein M636_17840 PF00460 Flagella basal body rod protein M636_17840 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M636_17845 PF00460 Flagella basal body rod protein M636_17845 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M636_17855 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M636_17855 PF07559 Flagellar basal body protein FlaE M636_17855 PF00460 Flagella basal body rod protein M636_17860 PF13861 FlgD Tudor-like domain M636_17860 PF03963 Flagellar hook capping protein - N-terminal region M636_17860 PF13860 FlgD Ig-like domain M636_17865 PF00460 Flagella basal body rod protein M636_17865 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M636_17870 PF00460 Flagella basal body rod protein M636_17875 PF03705 CheR methyltransferase, all-alpha domain M636_17875 PF01739 CheR methyltransferase, SAM binding domain M636_17880 PF01584 CheW-like domain M636_17880 PF00072 Response regulator receiver domain M636_17925 PF00691 OmpA family M636_17925 PF01389 OmpA-like transmembrane domain M636_17930 PF00749 tRNA synthetases class I (E and Q), catalytic domain M636_17935 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) M636_17940 PF13609 Gram-negative porin M636_17950 PF00403 Heavy-metal-associated domain M636_17965 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain M636_17965 PF03173 Putative carbohydrate binding domain M636_17965 PF02838 Glycosyl hydrolase family 20, domain 2 M636_17965 PF00728 Glycosyl hydrolase family 20, catalytic domain M636_17985 PF01713 Smr domain M636_17990 PF01479 S4 domain M636_17990 PF00849 RNA pseudouridylate synthase M636_17995 PF04073 Aminoacyl-tRNA editing domain M636_18000 PF02872 5'-nucleotidase, C-terminal domain M636_18000 PF00149 Calcineurin-like phosphoesterase M636_18005 PF00793 DAHP synthetase I family M636_18010 PF13369 Transglutaminase-like superfamily M636_18015 PF04247 Invasion gene expression up-regulator, SirB M636_18020 PF13847 Methyltransferase domain M636_18020 PF17827 PrmC N-terminal domain M636_18025 PF03462 PCRF domain M636_18025 PF00472 RF-1 domain M636_18030 PF01488 Shikimate / quinate 5-dehydrogenase M636_18030 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain M636_18030 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain M636_18035 PF03550 Outer membrane lipoprotein LolB M636_18040 PF08544 GHMP kinases C terminal M636_18040 PF00288 GHMP kinases N terminal domain M636_18045 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M636_18045 PF14572 Phosphoribosyl synthetase-associated domain M636_18050 PF01195 Peptidyl-tRNA hydrolase M636_18055 PF01926 50S ribosome-binding GTPase M636_18055 PF06071 Protein of unknown function (DUF933) M636_18170 PF01494 FAD binding domain M636_18175 PF01938 TRAM domain M636_18175 PF04055 Radical SAM superfamily M636_18175 PF00919 Uncharacterized protein family UPF0004 M636_18180 PF02562 PhoH-like protein M636_18185 PF02130 Uncharacterized protein family UPF0054 M636_18190 PF03471 Transporter associated domain M636_18190 PF00571 CBS domain M636_18195 PF00795 Carbon-nitrogen hydrolase M636_18200 PF07295 Zinc-ribbon containing domain M636_18205 PF08264 Anticodon-binding domain of tRNA M636_18205 PF00133 tRNA synthetases class I (I, L, M and V) M636_18205 PF13603 Leucyl-tRNA synthetase, Domain 2 M636_18210 PF04390 Lipopolysaccharide-assembly M636_18215 PF14840 Processivity clamp loader gamma complex DNA pol III C-term M636_18215 PF06144 DNA polymerase III, delta subunit M636_18225 PF02590 Predicted SPOUT methyltransferase M636_18230 PF00905 Penicillin binding protein transpeptidase domain M636_18230 PF03717 Penicillin-binding Protein dimerisation domain M636_18235 PF01098 Cell cycle protein M636_18240 PF03330 Lytic transglycolase M636_18240 PF05036 Sporulation related domain M636_18245 PF07943 Penicillin-binding protein 5, C-terminal domain M636_18245 PF00768 D-alanyl-D-alanine carboxypeptidase M636_18250 PF04359 Protein of unknown function (DUF493) M636_18255 PF03099 Biotin/lipoate A/B protein ligase family M636_18260 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family M636_18260 PF04055 Radical SAM superfamily M636_18265 PF00464 Serine hydroxymethyltransferase M636_18270 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 M636_18270 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M636_18285 PF16657 Maltogenic Amylase, C-terminal domain M636_18285 PF00128 Alpha amylase, catalytic domain M636_18290 PF00367 phosphotransferase system, EIIB M636_18290 PF02378 Phosphotransferase system, EIIC M636_18295 PF00356 Bacterial regulatory proteins, lacI family M636_18305 PF09383 NIL domain M636_18305 PF00005 ABC transporter M636_18310 PF00528 Binding-protein-dependent transport system inner membrane component M636_18315 PF03180 NLPA lipoprotein M636_18320 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) M636_18325 PF07348 Syd protein (SUKH-2) M636_18330 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term M636_18330 PF14489 QueF-like protein M636_18340 PF00072 Response regulator receiver domain M636_18340 PF00990 Diguanylate cyclase, GGDEF domain M636_18345 PF11892 Domain of unknown function (DUF3412) M636_18345 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases M636_18345 PF03641 Possible lysine decarboxylase M636_18350 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M636_18350 PF01367 5'-3' exonuclease, C-terminal SAM fold M636_18355 PF01223 DNA/RNA non-specific endonuclease M636_18360 PF01728 FtsJ-like methyltransferase M636_18360 PF18125 RlmM ferredoxin-like domain M636_18365 PF04241 Protein of unknown function (DUF423) M636_18375 PF03466 LysR substrate binding domain M636_18375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_18380 PF02926 THUMP domain M636_18380 PF02568 Thiamine biosynthesis protein (ThiI) M636_18390 PF00691 OmpA family M636_18395 PF01618 MotA/TolQ/ExbB proton channel family M636_18400 PF02609 Exonuclease VII small subunit M636_18405 PF00348 Polyprenyl synthetase M636_18410 PF02780 Transketolase, C-terminal domain M636_18410 PF02779 Transketolase, pyrimidine binding domain M636_18410 PF13292 1-deoxy-D-xylulose-5-phosphate synthase M636_18415 PF04608 Phosphatidylglycerophosphatase A M636_18420 PF00586 AIR synthase related protein, N-terminal domain M636_18420 PF02769 AIR synthase related protein, C-terminal domain M636_18425 PF01029 NusB family M636_18430 PF00885 6,7-dimethyl-8-ribityllumazine synthase M636_18435 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M636_18435 PF00925 GTP cyclohydrolase II M636_18440 PF00677 Lumazine binding domain M636_18445 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M636_18445 PF01872 RibD C-terminal domain M636_18450 PF03477 ATP cone domain M636_18455 PF00171 Aldehyde dehydrogenase family M636_18460 PF01472 PUA domain M636_18460 PF00696 Amino acid kinase family M636_18465 PF07417 Sigma factor-binding transcriptional regulator Crl M636_18475 PF00156 Phosphoribosyl transferase domain M636_18480 PF00860 Permease family M636_18485 PF01546 Peptidase family M20/M25/M40 M636_18485 PF07687 Peptidase dimerisation domain M636_18510 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal M636_18510 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain M636_18510 PF02769 AIR synthase related protein, C-terminal domain M636_18515 PF00497 Bacterial extracellular solute-binding proteins, family 3 M636_18515 PF01464 Transglycosylase SLT domain M636_18525 PF14437 MafB19-like deaminase M636_18530 PF03806 AbgT putative transporter family M636_18550 PF07963 Prokaryotic N-terminal methylation motif M636_18550 PF00114 Pilin (bacterial filament) M636_18555 PF07963 Prokaryotic N-terminal methylation motif M636_18555 PF00114 Pilin (bacterial filament) M636_18560 PF01556 DnaJ C terminal domain M636_18560 PF00226 DnaJ domain M636_18560 PF00684 DnaJ central domain M636_18565 PF00012 Hsp70 protein M636_18570 PF00375 Sodium:dicarboxylate symporter family M636_18575 PF01025 GrpE M636_18580 PF01513 ATP-NAD kinase M636_18590 PF02463 RecF/RecN/SMC N terminal domain M636_18595 PF04355 SmpA / OmlA family M636_18600 PF03658 RnfH family Ubiquitin M636_18605 PF03364 Polyketide cyclase / dehydrase and lipid transport M636_18610 PF01668 SmpB protein M636_18620 PF00075 RNase H M636_18635 PF00239 Resolvase, N terminal domain M636_18635 PF02796 Helix-turn-helix domain of resolvase M636_18650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_18650 PF03466 LysR substrate binding domain M636_18655 PF00583 Acetyltransferase (GNAT) family M636_18655 PF00795 Carbon-nitrogen hydrolase M636_18675 PF00202 Aminotransferase class-III M636_18680 PF01053 Cys/Met metabolism PLP-dependent enzyme M636_18685 PF07969 Amidohydrolase family M636_18705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_18705 PF03466 LysR substrate binding domain M636_18710 PF01266 FAD dependent oxidoreductase M636_18715 PF01235 Sodium:alanine symporter family M636_18725 PF01184 GPR1/FUN34/yaaH family M636_18730 PF00704 Glycosyl hydrolases family 18 M636_18730 PF06483 Chitinase C M636_18735 PF03553 Na+/H+ antiporter family M636_18740 PF00117 Glutamine amidotransferase class-I M636_18740 PF00958 GMP synthase C terminal domain M636_18740 PF02540 NAD synthase M636_18745 PF00478 IMP dehydrogenase / GMP reductase domain M636_18745 PF00571 CBS domain M636_18750 PF02601 Exonuclease VII, large subunit M636_18750 PF13742 OB-fold nucleic acid binding domain M636_18765 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal M636_18765 PF01926 50S ribosome-binding GTPase M636_18770 PF13360 PQQ-like domain M636_18775 PF09976 Tetratricopeptide repeat-like domain M636_18780 PF03129 Anticodon binding domain M636_18780 PF13393 Histidyl-tRNA synthetase M636_18785 PF04551 GcpE protein M636_18790 PF13464 Domain of unknown function (DUF4115) M636_18795 PF04055 Radical SAM superfamily M636_18800 PF00334 Nucleoside diphosphate kinase M636_18805 PF12404 Peptidase M636_18805 PF00883 Cytosol aminopeptidase family, catalytic domain M636_18810 PF04384 Iron-sulphur cluster assembly M636_18815 PF00111 2Fe-2S iron-sulfur cluster binding domain M636_18820 PF00012 Hsp70 protein M636_18825 PF00226 DnaJ domain M636_18825 PF07743 HSCB C-terminal oligomerisation domain M636_18830 PF01521 Iron-sulphur cluster biosynthesis M636_18835 PF01592 NifU-like N terminal domain M636_18840 PF00266 Aminotransferase class-V M636_18845 PF02082 Transcriptional regulator M636_18850 PF00588 SpoU rRNA Methylase family M636_18855 PF00459 Inositol monophosphatase family M636_18860 PF07549 SecD/SecF GG Motif M636_18860 PF02355 Protein export membrane protein M636_18865 PF02355 Protein export membrane protein M636_18865 PF13721 SecD export protein N-terminal TM region M636_18865 PF07549 SecD/SecF GG Motif M636_18870 PF02699 Preprotein translocase subunit M636_18875 PF01702 Queuine tRNA-ribosyltransferase M636_18880 PF02547 Queuosine biosynthesis protein M636_18890 PF00571 CBS domain M636_18895 PF00463 Isocitrate lyase family M636_18900 PF01274 Malate synthase M636_18905 PF03466 LysR substrate binding domain M636_18905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_18910 PF00578 AhpC/TSA family M636_18910 PF10417 C-terminal domain of 1-Cys peroxiredoxin M636_18915 PF03932 CutC family M636_18920 PF03976 Polyphosphate kinase 2 (PPK2) M636_18925 PF01895 PhoU domain M636_18930 PF00005 ABC transporter M636_18935 PF00528 Binding-protein-dependent transport system inner membrane component M636_18940 PF00528 Binding-protein-dependent transport system inner membrane component M636_18945 PF02503 Polyphosphate kinase middle domain M636_18945 PF17941 Polyphosphate kinase C-terminal domain 1 M636_18945 PF13090 Polyphosphate kinase C-terminal domain 2 M636_18945 PF13089 Polyphosphate kinase N-terminal domain M636_18950 PF02541 Ppx/GppA phosphatase family M636_18955 PF12849 PBP superfamily domain M636_18960 PF00989 PAS fold M636_18960 PF11808 Phosphate regulon sensor protein PhoR M636_18960 PF00512 His Kinase A (phospho-acceptor) domain M636_18960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_18965 PF00072 Response regulator receiver domain M636_18965 PF00486 Transcriptional regulatory protein, C terminal M636_18970 PF04381 Putative exonuclease, RdgC M636_18980 PF00037 4Fe-4S binding domain M636_18990 PF03411 Penicillin-insensitive murein endopeptidase M636_19035 PF02861 Clp amino terminal domain, pathogenicity island component M636_19035 PF00004 ATPase family associated with various cellular activities (AAA) M636_19035 PF07724 AAA domain (Cdc48 subfamily) M636_19035 PF10431 C-terminal, D2-small domain, of ClpB protein M636_19035 PF17871 AAA lid domain M636_19045 PF00849 RNA pseudouridylate synthase M636_19045 PF01479 S4 domain M636_19050 PF13525 Outer membrane lipoprotein M636_19055 PF00497 Bacterial extracellular solute-binding proteins, family 3 M636_19055 PF01464 Transglycosylase SLT domain M636_19060 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M636_19065 PF00800 Prephenate dehydratase M636_19065 PF01817 Chorismate mutase type II M636_19070 PF01931 Protein of unknown function DUF84 M636_19075 PF01371 Trp repressor protein M636_19080 PF14718 Soluble lytic murein transglycosylase L domain M636_19080 PF01464 Transglycosylase SLT domain M636_19085 PF12848 ABC transporter M636_19085 PF00005 ABC transporter M636_19095 PF07238 PilZ domain M636_19100 PF04225 Opacity-associated protein A LysM-like domain M636_19100 PF01551 Peptidase family M23 M636_19105 PF02153 Prephenate dehydrogenase M636_19105 PF01817 Chorismate mutase type II M636_19110 PF00793 DAHP synthetase I family M636_19115 PF00933 Glycosyl hydrolase family 3 N terminal domain M636_19120 PF03702 Anhydro-N-acetylmuramic acid kinase M636_19125 PF13580 SIS domain M636_19140 PF02554 Carbon starvation protein CstA M636_19145 PF06580 Histidine kinase M636_19145 PF07694 5TMR of 5TMR-LYT M636_19150 PF04397 LytTr DNA-binding domain M636_19150 PF00072 Response regulator receiver domain M636_19155 PF02401 LytB protein M636_19160 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M636_19165 PF01252 Signal peptidase (SPase) II M636_19170 PF08264 Anticodon-binding domain of tRNA M636_19170 PF00133 tRNA synthetases class I (I, L, M and V) M636_19170 PF06827 Zinc finger found in FPG and IleRS M636_19175 PF01687 Riboflavin kinase M636_19175 PF06574 FAD synthetase M636_19180 PF03023 Lipid II flippase MurJ M636_19185 PF01649 Ribosomal protein S20 M636_19190 PF01022 Bacterial regulatory protein, arsR family M636_19195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_19195 PF03466 LysR substrate binding domain M636_19200 PF02690 Na+/Pi-cotransporter M636_19210 PF00303 Thymidylate synthase M636_19215 PF01790 Prolipoprotein diacylglyceryl transferase M636_19220 PF01925 Sulfite exporter TauE/SafE M636_19225 PF01590 GAF domain M636_19225 PF05524 PEP-utilising enzyme, N-terminal M636_19225 PF00391 PEP-utilising enzyme, mobile domain M636_19225 PF02896 PEP-utilising enzyme, TIM barrel domain M636_19230 PF00293 NUDIX domain M636_19235 PF02976 DNA mismatch repair enzyme MutH M636_19245 PF00248 Aldo/keto reductase family M636_19260 PF00072 Response regulator receiver domain M636_19260 PF02954 Bacterial regulatory protein, Fis family M636_19260 PF00158 Sigma-54 interaction domain M636_19265 PF00152 tRNA synthetases class II (D, K and N) M636_19265 PF01336 OB-fold nucleic acid binding domain M636_19270 PF03462 PCRF domain M636_19270 PF00472 RF-1 domain M636_19275 PF01368 DHH family M636_19275 PF17768 RecJ OB domain M636_19275 PF02272 DHHA1 domain M636_19280 PF10411 Disulfide bond isomerase protein N-terminus M636_19280 PF13098 Thioredoxin-like domain M636_19285 PF02899 Phage integrase, N-terminal SAM-like domain M636_19285 PF00589 Phage integrase family M636_19290 PF00258 Flavodoxin M636_19295 PF05525 Branched-chain amino acid transport protein M636_19300 PF05175 Methyltransferase small domain M636_19305 PF00270 DEAD/DEAH box helicase M636_19305 PF00271 Helicase conserved C-terminal domain M636_19310 PF03883 Peroxide stress protein YaaA M636_19315 PF01235 Sodium:alanine symporter family M636_19330 PF03167 Uracil DNA glycosylase superfamily M636_19335 PF01261 Xylose isomerase-like TIM barrel M636_19340 PF01228 Glycine radical M636_19345 PF14821 Threonine synthase N terminus M636_19345 PF00291 Pyridoxal-phosphate dependent enzyme M636_19350 PF00288 GHMP kinases N terminal domain M636_19350 PF08544 GHMP kinases C terminal M636_19355 PF01842 ACT domain M636_19355 PF00742 Homoserine dehydrogenase M636_19355 PF03447 Homoserine dehydrogenase, NAD binding domain M636_19355 PF00696 Amino acid kinase family M636_19355 PF13840 ACT domain M636_19365 PF03737 Aldolase/RraA M636_19375 PF00072 Response regulator receiver domain M636_19375 PF00486 Transcriptional regulatory protein, C terminal M636_19385 PF00072 Response regulator receiver domain M636_19385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_19385 PF18415 Histidine kinase receptor ArcB trans-membrane domain M636_19385 PF00512 His Kinase A (phospho-acceptor) domain M636_19385 PF00989 PAS fold M636_19385 PF01627 Hpt domain M636_19390 PF00360 Phytochrome region M636_19390 PF01590 GAF domain M636_19390 PF00563 EAL domain M636_19390 PF00990 Diguanylate cyclase, GGDEF domain M636_19395 PF16199 Radical_SAM C-terminal domain M636_19395 PF04055 Radical SAM superfamily M636_19400 PF00310 Glutamine amidotransferases class-II M636_19400 PF04898 Glutamate synthase central domain M636_19400 PF01493 GXGXG motif M636_19400 PF01645 Conserved region in glutamate synthase M636_19405 PF07992 Pyridine nucleotide-disulphide oxidoreductase M636_19405 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M636_19410 PF01645 Conserved region in glutamate synthase M636_19410 PF01493 GXGXG motif M636_19410 PF00310 Glutamine amidotransferases class-II M636_19410 PF04898 Glutamate synthase central domain M636_19415 PF07992 Pyridine nucleotide-disulphide oxidoreductase M636_19415 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M636_19425 PF01048 Phosphorylase superfamily M636_19430 PF03186 CobD/Cbib protein M636_19430 PF17113 Regulatory signalling modulator protein AmpE M636_19435 PF01497 Periplasmic binding protein M636_19440 PF03458 UPF0126 domain M636_19445 PF03466 LysR substrate binding domain M636_19445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_19450 PF01925 Sulfite exporter TauE/SafE M636_19465 PF02142 MGS-like domain M636_19465 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M636_19465 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M636_19470 PF00117 Glutamine amidotransferase class-I M636_19470 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain M636_19475 PF01113 Dihydrodipicolinate reductase, N-terminus M636_19475 PF05173 Dihydrodipicolinate reductase, C-terminus M636_19480 PF00293 NUDIX domain M636_19485 PF01043 SecA preprotein cross-linking domain M636_19485 PF07517 SecA DEAD-like domain M636_19485 PF02810 SEC-C motif M636_19485 PF07516 SecA Wing and Scaffold domain M636_19495 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase M636_19500 PF00091 Tubulin/FtsZ family, GTPase domain M636_19500 PF12327 FtsZ family, C-terminal domain M636_19505 PF02491 SHS2 domain inserted in FTSA M636_19510 PF08478 POTRA domain, FtsQ-type M636_19510 PF03799 Cell division protein FtsQ M636_19515 PF01225 Mur ligase family, catalytic domain M636_19515 PF02875 Mur ligase family, glutamate ligase domain M636_19515 PF08245 Mur ligase middle domain M636_19520 PF04101 Glycosyltransferase family 28 C-terminal domain M636_19520 PF03033 Glycosyltransferase family 28 N-terminal domain M636_19525 PF01098 Cell cycle protein M636_19530 PF08245 Mur ligase middle domain M636_19530 PF02875 Mur ligase family, glutamate ligase domain M636_19535 PF00953 Glycosyl transferase family 4 M636_19535 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 M636_19540 PF01225 Mur ligase family, catalytic domain M636_19540 PF02875 Mur ligase family, glutamate ligase domain M636_19540 PF08245 Mur ligase middle domain M636_19545 PF02875 Mur ligase family, glutamate ligase domain M636_19545 PF08245 Mur ligase middle domain M636_19545 PF01225 Mur ligase family, catalytic domain M636_19550 PF00905 Penicillin binding protein transpeptidase domain M636_19550 PF03717 Penicillin-binding Protein dimerisation domain M636_19555 PF04999 Cell division protein FtsL M636_19560 PF01795 MraW methylase family M636_19565 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M636_19570 PF04348 LppC putative lipoprotein M636_19575 PF02021 Uncharacterised protein family UPF0102 M636_19580 PF13580 SIS domain M636_19585 PF04972 BON domain M636_19590 PF04386 Stringent starvation protein B M636_19595 PF02798 Glutathione S-transferase, N-terminal domain M636_19595 PF00043 Glutathione S-transferase, C-terminal domain M636_19600 PF02167 Cytochrome C1 family M636_19605 PF00032 Cytochrome b(C-terminal)/b6/petD M636_19605 PF00033 Cytochrome b/b6/petB M636_19610 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal M636_19610 PF00355 Rieske [2Fe-2S] domain M636_19615 PF00380 Ribosomal protein S9/S16 M636_19620 PF00572 Ribosomal protein L13 M636_19625 PF03969 AFG1-like ATPase M636_19630 PF06295 Protein of unknown function (DUF1043) M636_19635 PF00595 PDZ domain M636_19640 PF13180 PDZ domain M636_19645 PF03989 DNA gyrase C-terminal domain, beta-propeller M636_19645 PF00521 DNA gyrase/topoisomerase IV, subunit A M636_19650 PF00204 DNA gyrase B M636_19650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_19650 PF01751 Toprim domain M636_19650 PF00986 DNA gyrase B subunit, carboxyl terminus M636_19655 PF05728 Uncharacterised protein family (UPF0227) M636_19660 PF00149 Calcineurin-like phosphoesterase M636_19665 PF06853 Protein of unknown function (DUF1249) M636_19670 PF00293 NUDIX domain M636_19675 PF02321 Outer membrane efflux protein M636_19680 PF01467 Cytidylyltransferase-like M636_19680 PF00294 pfkB family carbohydrate kinase M636_19685 PF03710 Glutamate-ammonia ligase adenylyltransferase M636_19685 PF08335 GlnD PII-uridylyltransferase M636_19690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M636_19690 PF00672 HAMP domain M636_19700 PF01928 CYTH domain M636_19705 PF01865 Protein of unknown function DUF47 M636_19710 PF01384 Phosphate transporter family M636_19715 PF08239 Bacterial SH3 domain M636_19725 PF13401 AAA domain M636_19725 PF01471 Putative peptidoglycan binding domain M636_19730 PF12627 Probable RNA and SrmB- binding site of polymerase A M636_19730 PF01966 HD domain M636_19730 PF01743 Poly A polymerase head domain M636_19735 PF02673 Bacitracin resistance protein BacA M636_19740 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M636_19745 PF02152 Dihydroneopterin aldolase M636_19750 PF02660 Glycerol-3-phosphate acyltransferase M636_19755 PF12697 Alpha/beta hydrolase family M636_19760 PF00814 Glycoprotease family M636_19765 PF01165 Ribosomal protein S21 M636_19770 PF09424 Yqey-like protein M636_19775 PF10410 DnaB-helicase binding domain of primase M636_19775 PF08278 DNA primase DnaG DnaB-binding M636_19775 PF08275 DNA primase catalytic core, N-terminal domain M636_19775 PF01807 CHC2 zinc finger M636_19780 PF04546 Sigma-70, non-essential region M636_19780 PF04542 Sigma-70 region 2 M636_19780 PF00140 Sigma-70 factor, region 1.2 M636_19780 PF04539 Sigma-70 region 3 M636_19780 PF03979 Sigma-70 factor, region 1.1 M636_19780 PF04545 Sigma-70, region 4 M636_19795 PF07804 HipA-like C-terminal domain M636_19795 PF13657 HipA N-terminal domain M636_19815 PF00580 UvrD/REP helicase N-terminal domain M636_19815 PF13361 UvrD-like helicase C-terminal domain M636_19845 PF07804 HipA-like C-terminal domain M636_19845 PF13657 HipA N-terminal domain M636_19865 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M636_19865 PF00529 HlyD membrane-fusion protein of T1SS M636_19885 PF03180 NLPA lipoprotein M636_19920 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M636_19920 PF02378 Phosphotransferase system, EIIC M636_19920 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M636_19925 PF08125 Mannitol dehydrogenase C-terminal domain M636_19925 PF01232 Mannitol dehydrogenase Rossmann domain M636_19930 PF05068 Mannitol repressor M636_19935 PF00158 Sigma-54 interaction domain M636_19935 PF02954 Bacterial regulatory protein, Fis family M636_19935 PF00989 PAS fold M636_19940 PF02896 PEP-utilising enzyme, TIM barrel domain M636_19940 PF05524 PEP-utilising enzyme, N-terminal M636_19940 PF00391 PEP-utilising enzyme, mobile domain M636_19945 PF02734 DAK2 domain M636_19950 PF02733 Dak1 domain M636_19955 PF00465 Iron-containing alcohol dehydrogenase M636_19960 PF00512 His Kinase A (phospho-acceptor) domain M636_19960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_19960 PF00672 HAMP domain M636_19965 PF00486 Transcriptional regulatory protein, C terminal M636_19965 PF00072 Response regulator receiver domain M636_19975 PF01380 SIS domain M636_19980 PF08220 DeoR-like helix-turn-helix domain M636_19980 PF00455 DeoR C terminal sensor domain M636_19985 PF00224 Pyruvate kinase, barrel domain M636_19985 PF02887 Pyruvate kinase, alpha/beta domain M636_19995 PF07694 5TMR of 5TMR-LYT M636_19995 PF00990 Diguanylate cyclase, GGDEF domain M636_20000 PF10369 Small subunit of acetolactate synthase M636_20005 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M636_20005 PF00205 Thiamine pyrophosphate enzyme, central domain M636_20005 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M636_20010 PF00501 AMP-binding enzyme M636_20015 PF03466 LysR substrate binding domain M636_20015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_20025 PF01569 PAP2 superfamily M636_20035 PF00682 HMGL-like M636_20035 PF08502 LeuA allosteric (dimerisation) domain M636_20040 PF00180 Isocitrate/isopropylmalate dehydrogenase M636_20045 PF00330 Aconitase family (aconitate hydratase) M636_20050 PF00694 Aconitase C-terminal domain M636_20060 PF00226 DnaJ domain M636_20060 PF05099 Tellurite resistance protein TerB M636_20065 PF04453 LPS transport system D M636_20065 PF03968 OstA-like protein M636_20070 PF09312 SurA N-terminal domain M636_20075 PF04166 Pyridoxal phosphate biosynthetic protein PdxA M636_20080 PF00398 Ribosomal RNA adenine dimethylase M636_20085 PF04379 ApaG domain M636_20090 PF00149 Calcineurin-like phosphoesterase M636_20095 PF00186 Dihydrofolate reductase M636_20100 PF12821 Threonine/Serine exporter, ThrE M636_20105 PF06738 Putative threonine/serine exporter M636_20110 PF01926 50S ribosome-binding GTPase M636_20110 PF01018 GTP1/OBG M636_20115 PF01016 Ribosomal L27 protein M636_20120 PF00829 Ribosomal prokaryotic L21 protein M636_20125 PF00348 Polyprenyl synthetase M636_20135 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M636_20135 PF00056 lactate/malate dehydrogenase, NAD binding domain M636_20140 PF02863 Arginine repressor, C-terminal domain M636_20140 PF01316 Arginine repressor, DNA binding domain M636_20145 PF16868 NMT1-like family M636_20165 PF00005 ABC transporter M636_20170 PF00528 Binding-protein-dependent transport system inner membrane component M636_20180 PF02441 Flavoprotein M636_20185 PF01225 Mur ligase family, catalytic domain M636_20185 PF02875 Mur ligase family, glutamate ligase domain M636_20185 PF08245 Mur ligase middle domain M636_20190 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain M636_20195 PF00719 Inorganic pyrophosphatase M636_20205 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like M636_20210 PF04357 TamB, inner membrane protein subunit of TAM complex M636_20215 PF01103 Surface antigen M636_20215 PF17243 POTRA domain TamA domain 1 M636_20220 PF01625 Peptide methionine sulfoxide reductase M636_20225 PF06526 Protein of unknown function (DUF1107) M636_20230 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) M636_20245 PF00005 ABC transporter M636_20275 PF02080 TrkA-C domain M636_20275 PF03600 Citrate transporter M636_20280 PF00009 Elongation factor Tu GTP binding domain M636_20285 PF01507 Phosphoadenosine phosphosulfate reductase family M636_20290 PF10414 Sirohaem synthase dimerisation region M636_20290 PF14824 Sirohaem biosynthesis protein central M636_20290 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M636_20295 PF02872 5'-nucleotidase, C-terminal domain M636_20295 PF00149 Calcineurin-like phosphoesterase M636_20305 PF03880 DbpA RNA binding domain M636_20305 PF00270 DEAD/DEAH box helicase M636_20305 PF00271 Helicase conserved C-terminal domain M636_20310 PF13673 Acetyltransferase (GNAT) domain M636_20320 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M636_20320 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M636_20330 PF01196 Ribosomal protein L17 M636_20335 PF01000 RNA polymerase Rpb3/RpoA insert domain M636_20335 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain M636_20335 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain M636_20340 PF00163 Ribosomal protein S4/S9 N-terminal domain M636_20340 PF01479 S4 domain M636_20345 PF00411 Ribosomal protein S11 M636_20350 PF00416 Ribosomal protein S13/S18 M636_20355 PF00444 Ribosomal protein L36 M636_20360 PF00344 SecY translocase M636_20365 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A M636_20370 PF00327 Ribosomal protein L30p/L7e M636_20375 PF03719 Ribosomal protein S5, C-terminal domain M636_20375 PF00333 Ribosomal protein S5, N-terminal domain M636_20380 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast M636_20385 PF00347 Ribosomal protein L6 M636_20390 PF00410 Ribosomal protein S8 M636_20395 PF00253 Ribosomal protein S14p/S29e M636_20400 PF00281 Ribosomal protein L5 M636_20400 PF00673 ribosomal L5P family C-terminus M636_20405 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 M636_20405 PF00467 KOW motif M636_20410 PF00238 Ribosomal protein L14p/L23e M636_20415 PF00366 Ribosomal protein S17 M636_20420 PF00831 Ribosomal L29 protein M636_20425 PF00252 Ribosomal protein L16p/L10e M636_20430 PF00189 Ribosomal protein S3, C-terminal domain M636_20430 PF07650 KH domain M636_20435 PF00237 Ribosomal protein L22p/L17e M636_20440 PF00203 Ribosomal protein S19 M636_20445 PF03947 Ribosomal Proteins L2, C-terminal domain M636_20445 PF00181 Ribosomal Proteins L2, RNA binding domain M636_20450 PF00276 Ribosomal protein L23 M636_20455 PF00573 Ribosomal protein L4/L1 family M636_20460 PF00297 Ribosomal protein L3 M636_20465 PF00338 Ribosomal protein S10p/S20e M636_20470 PF01197 Ribosomal protein L31 M636_20475 PF17764 3′ DNA-binding domain (3′BD) M636_20475 PF18319 PriA DNA helicase Cys-rich region (CRR) domain M636_20475 PF00271 Helicase conserved C-terminal domain M636_20475 PF00270 DEAD/DEAH box helicase M636_20475 PF18074 Primosomal protein N C-terminal domain M636_20480 PF00356 Bacterial regulatory proteins, lacI family M636_20490 PF00227 Proteasome subunit M636_20495 PF07724 AAA domain (Cdc48 subfamily) M636_20495 PF00004 ATPase family associated with various cellular activities (AAA) M636_20510 PF04002 RadC-like JAB domain M636_20540 PF01040 UbiA prenyltransferase family M636_20545 PF03737 Aldolase/RraA M636_20550 PF06005 Cell division protein ZapB M636_20555 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded M636_20560 PF00455 DeoR C terminal sensor domain M636_20560 PF08220 DeoR-like helix-turn-helix domain M636_20580 PF00121 Triosephosphate isomerase M636_20585 PF10996 Beta-Casp domain M636_20585 PF00753 Metallo-beta-lactamase superfamily M636_20585 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain M636_20590 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M636_20590 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M636_20590 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M636_20595 PF02719 Polysaccharide biosynthesis protein M636_20600 PF02397 Bacterial sugar transferase M636_20605 PF01370 NAD dependent epimerase/dehydratase family M636_20615 PF02350 UDP-N-acetylglucosamine 2-epimerase M636_20620 PF04321 RmlD substrate binding domain M636_20625 PF02719 Polysaccharide biosynthesis protein M636_20625 PF08485 Polysaccharide biosynthesis protein C-terminal M636_20655 PF13808 DDE_Tnp_1-associated M636_20655 PF01609 Transposase DDE domain M636_20690 PF06082 Exopolysaccharide biosynthesis protein YbjH M636_20695 PF01370 NAD dependent epimerase/dehydratase family M636_20700 PF03279 Bacterial lipid A biosynthesis acyltransferase M636_20705 PF01075 Glycosyltransferase family 9 (heptosyltransferase) M636_20710 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) M636_20720 PF13439 Glycosyltransferase Family 4 M636_20720 PF00534 Glycosyl transferases group 1 M636_20735 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M636_20740 PF01575 MaoC like domain M636_20745 PF00132 Bacterial transferase hexapeptide (six repeats) M636_20750 PF05523 WxcM-like, C-terminal M636_20755 PF00483 Nucleotidyl transferase M636_20760 PF16363 GDP-mannose 4,6 dehydratase M636_20770 PF01219 Prokaryotic diacylglycerol kinase M636_20775 PF01075 Glycosyltransferase family 9 (heptosyltransferase) M636_20780 PF00535 Glycosyl transferase family 2 M636_20785 PF00535 Glycosyl transferase family 2 M636_20790 PF05686 Glycosyl transferase family 90 M636_20795 PF01467 Cytidylyltransferase-like M636_20800 PF06827 Zinc finger found in FPG and IleRS M636_20800 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain M636_20800 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain M636_20810 PF00471 Ribosomal protein L33 M636_20815 PF00830 Ribosomal L28 family M636_20820 PF04002 RadC-like JAB domain M636_20825 PF00672 HAMP domain M636_20825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M636_20825 PF17200 Single Cache domain 2 M636_20830 PF04127 DNA / pantothenate metabolism flavoprotein M636_20830 PF02441 Flavoprotein M636_20835 PF00440 Bacterial regulatory proteins, tetR family M636_20840 PF03279 Bacterial lipid A biosynthesis acyltransferase M636_20845 PF00156 Phosphoribosyl transferase domain M636_20850 PF01138 3' exoribonuclease family, domain 1 M636_20850 PF03725 3' exoribonuclease family, domain 2 M636_20855 PF08340 Domain of unknown function (DUF1732) M636_20855 PF03755 YicC-like family, N-terminal region M636_20860 PF00535 Glycosyl transferase family 2 M636_20865 PF04138 GtrA-like protein M636_20875 PF13276 HTH-like domain M636_20875 PF13333 Integrase core domain M636_20875 PF00665 Integrase core domain M636_20880 PF01527 Transposase M636_20915 PF13426 PAS domain M636_20915 PF00990 Diguanylate cyclase, GGDEF domain M636_20915 PF00563 EAL domain M636_20930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M636_20935 PF00528 Binding-protein-dependent transport system inner membrane component M636_20935 PF12911 N-terminal TM domain of oligopeptide transport permease C M636_20940 PF00528 Binding-protein-dependent transport system inner membrane component M636_20945 PF07715 TonB-dependent Receptor Plug Domain M636_20945 PF00593 TonB dependent receptor M636_20960 PF01618 MotA/TolQ/ExbB proton channel family M636_20965 PF02472 Biopolymer transport protein ExbD/TolR M636_20985 PF00625 Guanylate kinase M636_20990 PF01192 RNA polymerase Rpb6 M636_20995 PF02824 TGS domain M636_20995 PF04607 Region found in RelA / SpoT proteins M636_20995 PF13291 ACT domain M636_21000 PF12105 SpoU, rRNA methylase, C-terminal M636_21000 PF00588 SpoU rRNA Methylase family M636_21005 PF00271 Helicase conserved C-terminal domain M636_21005 PF17191 RecG wedge domain M636_21005 PF00270 DEAD/DEAH box helicase M636_21015 PF00860 Permease family M636_21020 PF00672 HAMP domain M636_21020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_21020 PF00512 His Kinase A (phospho-acceptor) domain M636_21025 PF00486 Transcriptional regulatory protein, C terminal M636_21025 PF00072 Response regulator receiver domain M636_21035 PF03449 Transcription elongation factor, N-terminal M636_21035 PF01272 Transcription elongation factor, GreA/GreB, C-term M636_21045 PF09371 Tex-like protein N-terminal domain M636_21045 PF17674 HHH domain M636_21045 PF00575 S1 RNA binding domain M636_21045 PF16921 Tex protein YqgF-like domain M636_21055 PF00561 alpha/beta hydrolase fold M636_21060 PF00156 Phosphoribosyl transferase domain M636_21065 PF01106 NifU-like domain M636_21065 PF01521 Iron-sulphur cluster biosynthesis M636_21070 PF00293 NUDIX domain M636_21075 PF00459 Inositol monophosphatase family M636_21080 PF01203 Type II secretion system (T2SS), protein N M636_21085 PF04612 Type II secretion system (T2SS), protein M M636_21090 PF12693 GspL periplasmic domain M636_21090 PF05134 Type II secretion system (T2SS), protein L M636_21095 PF03934 Type II secretion system (T2SS), protein K M636_21100 PF07963 Prokaryotic N-terminal methylation motif M636_21100 PF11612 Type II secretion system (T2SS), protein J M636_21105 PF07963 Prokaryotic N-terminal methylation motif M636_21105 PF02501 Type II secretion system (T2SS), protein I M636_21110 PF12019 Type II transport protein GspH M636_21115 PF08334 Type II secretion system (T2SS), protein G M636_21115 PF07963 Prokaryotic N-terminal methylation motif M636_21120 PF00482 Type II secretion system (T2SS), protein F M636_21125 PF00437 Type II/IV secretion system protein M636_21130 PF00263 Bacterial type II and III secretion system protein M636_21130 PF03958 Bacterial type II/III secretion system short domain M636_21135 PF11356 Type II secretion system protein C M636_21140 PF01479 S4 domain M636_21145 PF01430 Hsp33 protein M636_21150 PF01293 Phosphoenolpyruvate carboxykinase M636_21160 PF00583 Acetyltransferase (GNAT) family M636_21160 PF09500 Putative thioesterase (yiiD_Cterm) M636_21165 PF02580 D-Tyr-tRNA(Tyr) deacylase M636_21170 PF03631 Virulence factor BrkB M636_21190 PF00120 Glutamine synthetase, catalytic domain M636_21190 PF03951 Glutamine synthetase, beta-Grasp domain M636_21205 PF00989 PAS fold M636_21205 PF00512 His Kinase A (phospho-acceptor) domain M636_21205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_21210 PF00158 Sigma-54 interaction domain M636_21210 PF00072 Response regulator receiver domain M636_21210 PF02954 Bacterial regulatory protein, Fis family M636_21215 PF00990 Diguanylate cyclase, GGDEF domain M636_21215 PF03707 Bacterial signalling protein N terminal repeat M636_21215 PF00563 EAL domain M636_21220 PF00962 Adenosine/AMP deaminase M636_21225 PF06969 HemN C-terminal domain M636_21225 PF04055 Radical SAM superfamily M636_21230 PF10675 Protein of unknown function (DUF2489) M636_21235 PF04220 Der GTPase activator (YihI) M636_21250 PF00034 Cytochrome c M636_21255 PF01926 50S ribosome-binding GTPase M636_21260 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M636_21260 PF01612 3'-5' exonuclease M636_21260 PF01367 5'-3' exonuclease, C-terminal SAM fold M636_21260 PF00476 DNA polymerase family A M636_21275 PF00490 Delta-aminolevulinic acid dehydratase M636_21280 PF01026 TatD related DNase M636_21290 PF00902 Sec-independent protein translocase protein (TatC) M636_21295 PF02416 mttA/Hcf106 family M636_21300 PF02416 mttA/Hcf106 family M636_21305 PF03109 ABC1 family M636_21310 PF02036 SCP-2 sterol transfer family M636_21315 PF01209 ubiE/COQ5 methyltransferase family M636_21320 PF02646 RmuC family M636_21330 PF00563 EAL domain M636_21330 PF00990 Diguanylate cyclase, GGDEF domain M636_21330 PF03707 Bacterial signalling protein N terminal repeat M636_21335 PF01594 AI-2E family transporter M636_21385 PF04972 BON domain M636_21390 PF01590 GAF domain M636_21390 PF02954 Bacterial regulatory protein, Fis family M636_21390 PF00158 Sigma-54 interaction domain M636_21400 PF00270 DEAD/DEAH box helicase M636_21400 PF00271 Helicase conserved C-terminal domain M636_21400 PF08148 DSHCT (NUC185) domain M636_21415 PF10625 Universal stress protein B (UspB) M636_21420 PF00210 Ferritin-like domain M636_21425 PF00582 Universal stress protein family M636_21430 PF00892 EamA-like transporter family M636_21440 PF04445 Putative SAM-dependent methyltransferase M636_21445 PF00563 EAL domain M636_21445 PF00990 Diguanylate cyclase, GGDEF domain M636_21445 PF08448 PAS fold M636_21450 PF01037 Lrp/AsnC ligand binding domain M636_21455 PF01432 Peptidase family M3 M636_21460 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ M636_21465 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M636_21465 PF07992 Pyridine nucleotide-disulphide oxidoreductase M636_21470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_21470 PF03466 LysR substrate binding domain M636_21475 PF01048 Phosphorylase superfamily M636_21480 PF01081 KDPG and KHG aldolase M636_21485 PF02447 GntP family permease M636_21490 PF01202 Shikimate kinase M636_21495 PF00920 Dehydratase family M636_21500 PF00893 Small Multidrug Resistance protein M636_21505 PF00893 Small Multidrug Resistance protein M636_21510 PF03466 LysR substrate binding domain M636_21510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_21515 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M636_21515 PF00356 Bacterial regulatory proteins, lacI family M636_21520 PF00069 Protein kinase domain M636_21555 PF00528 Binding-protein-dependent transport system inner membrane component M636_21555 PF12911 N-terminal TM domain of oligopeptide transport permease C M636_21565 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M636_21570 PF00005 ABC transporter M636_21570 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M636_21585 PF13419 Haloacid dehalogenase-like hydrolase M636_21615 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M636_21620 PF13361 UvrD-like helicase C-terminal domain M636_21620 PF00580 UvrD/REP helicase N-terminal domain M636_21625 PF00440 Bacterial regulatory proteins, tetR family M636_21625 PF16295 Tetracyclin repressor-like, C-terminal domain M636_21630 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M636_21635 PF00873 AcrB/AcrD/AcrF family M636_21640 PF04380 Membrane fusogenic activity M636_21645 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain M636_21645 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain M636_21650 PF03466 LysR substrate binding domain M636_21650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_21685 PF12724 Flavodoxin domain M636_21690 PF02386 Cation transport protein M636_21695 PF09186 Domain of unknown function (DUF1949) M636_21695 PF01205 Uncharacterized protein family UPF0029 M636_21700 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M636_21700 PF00378 Enoyl-CoA hydratase/isomerase M636_21700 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M636_21705 PF00108 Thiolase, N-terminal domain M636_21705 PF02803 Thiolase, C-terminal domain M636_21710 PF00107 Zinc-binding dehydrogenase M636_21710 PF08240 Alcohol dehydrogenase GroES-like domain M636_21715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_21715 PF03466 LysR substrate binding domain M636_21725 PF01206 Sulfurtransferase TusA M636_21735 PF01169 Uncharacterized protein family UPF0016 M636_21740 PF02091 Glycyl-tRNA synthetase alpha subunit M636_21745 PF05746 DALR anticodon binding domain M636_21745 PF02092 Glycyl-tRNA synthetase beta subunit M636_21750 PF00128 Alpha amylase, catalytic domain M636_21755 PF00155 Aminotransferase class I and II M636_21760 PF00011 Hsp20/alpha crystallin family M636_21775 PF18053 DNA gyrase B subunit insert domain M636_21775 PF01751 Toprim domain M636_21775 PF00986 DNA gyrase B subunit, carboxyl terminus M636_21775 PF00204 DNA gyrase B M636_21775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_21780 PF02463 RecF/RecN/SMC N terminal domain M636_21785 PF02767 DNA polymerase III beta subunit, central domain M636_21785 PF00712 DNA polymerase III beta subunit, N-terminal domain M636_21785 PF02768 DNA polymerase III beta subunit, C-terminal domain M636_21790 PF08299 Bacterial dnaA protein helix-turn-helix M636_21790 PF00308 Bacterial dnaA protein M636_21790 PF11638 DnaA N-terminal domain M636_21795 PF00497 Bacterial extracellular solute-binding proteins, family 3 M636_21800 PF00528 Binding-protein-dependent transport system inner membrane component M636_21805 PF00005 ABC transporter M636_21810 PF00468 Ribosomal protein L34 M636_21815 PF00825 Ribonuclease P M636_21820 PF02096 60Kd inner membrane protein M636_21820 PF14849 YidC periplasmic domain M636_21825 PF10396 GTP-binding protein TrmE N-terminus M636_21825 PF12631 MnmE helical domain M636_21825 PF01926 50S ribosome-binding GTPase M636_21830 PF00258 Flavodoxin M636_21835 PF01134 Glucose inhibited division protein A M636_21835 PF13932 GidA associated domain M636_21840 PF02527 rRNA small subunit methyltransferase G M636_21845 PF13614 AAA domain M636_21850 PF17762 HTH domain found in ParB protein M636_21850 PF02195 ParB-like nuclease domain M636_21855 PF03899 ATP synthase I chain M636_21860 PF00119 ATP synthase A chain M636_21865 PF00137 ATP synthase subunit C M636_21870 PF00430 ATP synthase B/B' CF(0) M636_21875 PF00213 ATP synthase delta (OSCP) subunit M636_21880 PF02874 ATP synthase alpha/beta family, beta-barrel domain M636_21880 PF00306 ATP synthase alpha/beta chain, C terminal domain M636_21880 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M636_21885 PF00231 ATP synthase M636_21890 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M636_21890 PF02874 ATP synthase alpha/beta family, beta-barrel domain M636_21895 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain M636_21895 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain M636_21900 PF12804 MobA-like NTP transferase domain M636_21900 PF00132 Bacterial transferase hexapeptide (six repeats) M636_21905 PF00528 Binding-protein-dependent transport system inner membrane component M636_21910 PF00497 Bacterial extracellular solute-binding proteins, family 3 M636_21915 PF07690 Major Facilitator Superfamily M636_21920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_21920 PF03466 LysR substrate binding domain M636_21925 PF00585 C-terminal regulatory domain of Threonine dehydratase M636_21925 PF00291 Pyridoxal-phosphate dependent enzyme M636_21930 PF00920 Dehydratase family M636_21935 PF01063 Amino-transferase class IV M636_21945 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M636_21945 PF00205 Thiamine pyrophosphate enzyme, central domain M636_21945 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M636_21950 PF01078 Magnesium chelatase, subunit ChlI M636_21950 PF13335 Magnesium chelatase, subunit ChlI C-terminal M636_21960 PF01553 Acyltransferase M636_21965 PF01323 DSBA-like thioredoxin domain M636_21970 PF01636 Phosphotransferase enzyme family M636_21975 PF13746 4Fe-4S dicluster domain M636_21975 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase M636_21975 PF12801 4Fe-4S binding domain M636_21980 PF06288 Protein of unknown function (DUF1040) M636_21990 PF07070 SpoOM protein M636_21995 PF03006 Haemolysin-III related M636_22005 PF02386 Cation transport protein M636_22010 PF02080 TrkA-C domain M636_22010 PF02254 TrkA-N domain M636_22015 PF01189 16S rRNA methyltransferase RsmB/F M636_22015 PF01029 NusB family M636_22020 PF00551 Formyl transferase M636_22020 PF02911 Formyl transferase, C-terminal domain M636_22025 PF01327 Polypeptide deformylase M636_22035 PF02481 DNA recombination-mediator protein A M636_22035 PF17782 DprA winged helix domain M636_22040 PF04361 Protein of unknown function (DUF494) M636_22045 PF01396 Topoisomerase DNA binding C4 zinc finger M636_22050 PF02222 ATP-grasp domain M636_22050 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain M636_22055 PF00731 AIR carboxylase M636_22060 PF01300 Telomere recombination M636_22065 PF01218 Coproporphyrinogen III oxidase M636_22070 PF08501 Shikimate dehydrogenase substrate binding domain M636_22070 PF18317 Shikimate 5'-dehydrogenase C-terminal domain M636_22070 PF01488 Shikimate / quinate 5-dehydrogenase M636_22075 PF07369 Protein of unknown function (DUF1488) M636_22080 PF00132 Bacterial transferase hexapeptide (six repeats) M636_22125 PF02537 CrcB-like protein, Camphor Resistance (CrcB) M636_22130 PF01964 Radical SAM ThiC family M636_22130 PF13667 ThiC-associated domain M636_22135 PF02581 Thiamine monophosphate synthase M636_22140 PF00899 ThiF family M636_22145 PF02597 ThiS family M636_22150 PF05690 Thiazole biosynthesis protein ThiG M636_22155 PF06968 Biotin and Thiamin Synthesis associated domain M636_22155 PF04055 Radical SAM superfamily M636_22160 PF00557 Metallopeptidase family M24 M636_22160 PF01321 Creatinase/Prolidase N-terminal domain M636_22160 PF00557 Metallopeptidase family M24 M636_22160 PF01321 Creatinase/Prolidase N-terminal domain M636_22165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_22165 PF03466 LysR substrate binding domain M636_22170 PF07690 Major Facilitator Superfamily M636_22190 PF05114 Protein of unknown function (DUF692) M636_22200 PF00580 UvrD/REP helicase N-terminal domain M636_22200 PF13361 UvrD-like helicase C-terminal domain M636_22215 PF01810 LysE type translocator M636_22225 PF00892 EamA-like transporter family M636_22230 PF09382 RQC domain M636_22230 PF00270 DEAD/DEAH box helicase M636_22230 PF00271 Helicase conserved C-terminal domain M636_22230 PF16124 RecQ zinc-binding M636_22230 PF00570 HRDC domain M636_22240 PF02592 Putative vitamin uptake transporter M636_22245 PF02541 Ppx/GppA phosphatase family M636_22250 PF00270 DEAD/DEAH box helicase M636_22250 PF00271 Helicase conserved C-terminal domain M636_22255 PF00085 Thioredoxin M636_22260 PF07497 Rho termination factor, RNA-binding domain M636_22260 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M636_22260 PF07498 Rho termination factor, N-terminal domain M636_22270 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase M636_22275 PF00111 2Fe-2S iron-sulfur cluster binding domain M636_22280 PF00175 Oxidoreductase NAD-binding domain M636_22320 PF07219 HemY protein N-terminus M636_22325 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase M636_22330 PF02602 Uroporphyrinogen-III synthase HemD M636_22335 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain M636_22335 PF03900 Porphobilinogen deaminase, C-terminal domain M636_22340 PF01295 Adenylate cyclase, class-I M636_22340 PF12633 Adenylate cyclase NT domain M636_22345 PF01491 Frataxin-like domain M636_22355 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M636_22355 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M636_22360 PF01678 Diaminopimelate epimerase M636_22370 PF00589 Phage integrase family M636_22370 PF02899 Phage integrase, N-terminal SAM-like domain M636_22375 PF13419 Haloacid dehalogenase-like hydrolase M636_22380 PF10442 FIST C domain M636_22380 PF08495 FIST N domain M636_22380 PF00990 Diguanylate cyclase, GGDEF domain M636_22380 PF00563 EAL domain M636_22405 PF12146 Serine aminopeptidase, S33 M636_22410 PF01810 LysE type translocator M636_22415 PF00563 EAL domain M636_22415 PF08668 HDOD domain M636_22420 PF01022 Bacterial regulatory protein, arsR family M636_22425 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M636_22425 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M636_22475 PF01914 MarC family integral membrane protein M636_22490 PF02881 SRP54-type protein, helical bundle domain M636_22490 PF00448 SRP54-type protein, GTPase domain M636_22495 PF00005 ABC transporter M636_22500 PF18075 FtsX extracellular domain M636_22505 PF00140 Sigma-70 factor, region 1.2 M636_22505 PF04545 Sigma-70, region 4 M636_22505 PF04542 Sigma-70 region 2 M636_22510 PF00581 Rhodanese-like domain M636_22515 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease M636_22515 PF01694 Rhomboid family M636_22520 PF03748 Flagellar basal body-associated protein FliL M636_22525 PF04345 Chorismate lyase M636_22530 PF01040 UbiA prenyltransferase family M636_22535 PF01553 Acyltransferase M636_22540 PF00717 Peptidase S24-like M636_22540 PF01726 LexA DNA binding domain M636_22545 PF04072 Leucine carboxyl methyltransferase M636_22550 PF01554 MatE M636_22555 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M636_22555 PF07992 Pyridine nucleotide-disulphide oxidoreductase M636_22560 PF00440 Bacterial regulatory proteins, tetR family M636_22590 PF12161 HsdM N-terminal domain M636_22590 PF02384 N-6 DNA Methylase M636_22600 PF08463 EcoEI R protein C-terminal M636_22600 PF00271 Helicase conserved C-terminal domain M636_22600 PF04851 Type III restriction enzyme, res subunit M636_22600 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) M636_22620 PF04002 RadC-like JAB domain M636_22635 PF06803 Protein of unknown function (DUF1232) M636_22675 PF05958 tRNA (Uracil-5-)-methyltransferase M636_22680 PF00593 TonB dependent receptor M636_22680 PF07715 TonB-dependent Receptor Plug Domain M636_22690 PF01177 Asp/Glu/Hydantoin racemase M636_22745 PF13091 PLD-like domain M636_22755 PF01565 FAD binding domain M636_22755 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain M636_22760 PF08279 HTH domain M636_22760 PF03099 Biotin/lipoate A/B protein ligase family M636_22760 PF02237 Biotin protein ligase C terminal domain M636_22765 PF00485 Phosphoribulokinase / Uridine kinase family M636_22795 PF03144 Elongation factor Tu domain 2 M636_22795 PF00009 Elongation factor Tu GTP binding domain M636_22795 PF03143 Elongation factor Tu C-terminal domain M636_22800 PF00584 SecE/Sec61-gamma subunits of protein translocation complex M636_22805 PF02357 Transcription termination factor nusG M636_22805 PF00467 KOW motif M636_22810 PF00298 Ribosomal protein L11, RNA binding domain M636_22810 PF03946 Ribosomal protein L11, N-terminal domain M636_22815 PF00687 Ribosomal protein L1p/L10e family M636_22820 PF00466 Ribosomal protein L10 M636_22825 PF16320 Ribosomal protein L7/L12 dimerisation domain M636_22825 PF00542 Ribosomal protein L7/L12 C-terminal domain M636_22830 PF04560 RNA polymerase Rpb2, domain 7 M636_22830 PF00562 RNA polymerase Rpb2, domain 6 M636_22830 PF10385 RNA polymerase beta subunit external 1 domain M636_22830 PF04565 RNA polymerase Rpb2, domain 3 M636_22830 PF04561 RNA polymerase Rpb2, domain 2 M636_22830 PF04563 RNA polymerase beta subunit M636_22835 PF04997 RNA polymerase Rpb1, domain 1 M636_22835 PF04998 RNA polymerase Rpb1, domain 5 M636_22835 PF04983 RNA polymerase Rpb1, domain 3 M636_22835 PF00623 RNA polymerase Rpb1, domain 2 M636_22835 PF05000 RNA polymerase Rpb1, domain 4 M636_22840 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ M636_22845 PF09297 NADH pyrophosphatase zinc ribbon domain M636_22845 PF00293 NUDIX domain M636_22860 PF01208 Uroporphyrinogen decarboxylase (URO-D) M636_22865 PF03167 Uracil DNA glycosylase superfamily M636_22870 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M636_22875 PF04222 Protein of unknown function (DUF416) M636_22880 PF01595 Cyclin M transmembrane N-terminal domain M636_22880 PF00571 CBS domain M636_22885 PF00216 Bacterial DNA-binding protein M636_22895 PF02844 Phosphoribosylglycinamide synthetase, N domain M636_22895 PF02843 Phosphoribosylglycinamide synthetase, C domain M636_22895 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain M636_22900 PF02142 MGS-like domain M636_22900 PF01808 AICARFT/IMPCHase bienzyme M636_22910 PF13411 MerR HTH family regulatory protein M636_22920 PF00486 Transcriptional regulatory protein, C terminal M636_22920 PF18500 CadC C-terminal domain 1 M636_22930 PF13520 Amino acid permease M636_22935 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain M636_22935 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain M636_22935 PF01276 Orn/Lys/Arg decarboxylase, major domain M636_23000 PF05230 MASE2 domain M636_23000 PF00990 Diguanylate cyclase, GGDEF domain M636_23005 PF12848 ABC transporter M636_23005 PF00005 ABC transporter M636_23010 PF07690 Major Facilitator Superfamily M636_23015 PF02954 Bacterial regulatory protein, Fis family M636_23020 PF01207 Dihydrouridine synthase (Dus) M636_23030 PF02785 Biotin carboxylase C-terminal domain M636_23030 PF00289 Biotin carboxylase, N-terminal domain M636_23030 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M636_23035 PF00364 Biotin-requiring enzyme M636_23040 PF01220 Dehydroquinase class II M636_23045 PF13193 AMP-binding enzyme C-terminal domain M636_23045 PF00501 AMP-binding enzyme M636_23045 PF16177 Acetyl-coenzyme A synthetase N-terminus M636_23060 PF12832 MFS_1 like family M636_23065 PF09308 LuxQ, periplasmic M636_23065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_23065 PF00072 Response regulator receiver domain M636_23065 PF00512 His Kinase A (phospho-acceptor) domain M636_23070 PF10415 Fumarase C C-terminus M636_23070 PF00206 Lyase M636_23085 PF00474 Sodium:solute symporter family M636_23095 PF02080 TrkA-C domain M636_23095 PF00999 Sodium/hydrogen exchanger family M636_23095 PF03471 Transporter associated domain M636_23100 PF00072 Response regulator receiver domain M636_23100 PF00196 Bacterial regulatory proteins, luxR family M636_23105 PF02683 Cytochrome C biogenesis protein transmembrane region M636_23105 PF11412 Disulphide bond corrector protein DsbC M636_23110 PF03605 Anaerobic c4-dicarboxylate membrane transporter M636_23115 PF00206 Lyase M636_23115 PF10415 Fumarase C C-terminus M636_23120 PF04186 FxsA cytoplasmic membrane protein M636_23125 PF00588 SpoU rRNA Methylase family M636_23130 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M636_23130 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M636_23135 PF16527 Two-component sensor protein CpxA, periplasmic domain M636_23135 PF00672 HAMP domain M636_23135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M636_23135 PF00512 His Kinase A (phospho-acceptor) domain M636_23140 PF00486 Transcriptional regulatory protein, C terminal M636_23140 PF00072 Response regulator receiver domain M636_23145 PF07813 LTXXQ motif family protein M636_23150 PF01545 Cation efflux family M636_23150 PF16916 Dimerisation domain of Zinc Transporter M636_23155 PF00365 Phosphofructokinase M636_23160 PF01554 MatE M636_23165 PF00166 Chaperonin 10 Kd subunit M636_23170 PF00118 TCP-1/cpn60 chaperonin family M636_23180 PF02308 MgtC family M636_23190 PF00842 Alanine racemase, C-terminal domain M636_23190 PF01168 Alanine racemase, N-terminal domain M636_23195 PF04055 Radical SAM superfamily M636_23200 PF09285 Elongation factor P, C-terminal M636_23200 PF08207 Elongation factor P (EF-P) KOW-like domain M636_23200 PF01132 Elongation factor P (EF-P) OB domain M636_23210 PF02313 Fumarate reductase subunit D M636_23215 PF02300 Fumarate reductase subunit C M636_23220 PF13183 4Fe-4S dicluster domain M636_23220 PF13085 2Fe-2S iron-sulfur cluster binding domain M636_23225 PF02910 Fumarate reductase flavoprotein C-term M636_23225 PF00890 FAD binding domain M636_23235 PF00152 tRNA synthetases class II (D, K and N) M636_23245 PF00440 Bacterial regulatory proteins, tetR family M636_23245 PF08360 QacR-like protein, C-terminal region M636_23255 PF01551 Peptidase family M23 M636_23260 PF00132 Bacterial transferase hexapeptide (six repeats) M636_23260 PF06426 Serine acetyltransferase, N-terminal M636_23265 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus M636_23265 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus M636_23270 PF02556 Preprotein translocase subunit SecB M636_23275 PF00581 Rhodanese-like domain M636_23285 PF06415 BPG-independent PGAM N-terminus (iPGM_N) M636_23285 PF01676 Metalloenzyme superfamily M636_23295 PF00672 HAMP domain M636_23295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M636_23300 PF00939 Sodium:sulfate symporter transmembrane region M636_23305 PF02666 Phosphatidylserine decarboxylase M636_23310 PF03193 RsgA GTPase M636_23315 PF00929 Exonuclease M636_23385 PF08331 Domain of unknown function (DUF1730) M636_23390 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE M636_23395 PF01520 N-acetylmuramoyl-L-alanine amidase M636_23400 PF08676 MutL C terminal dimerisation domain M636_23400 PF01119 DNA mismatch repair protein, C-terminal domain M636_23410 PF17209 Hfq protein M636_23415 PF01926 50S ribosome-binding GTPase M636_23415 PF13167 GTP-binding GTPase N-terminal M636_23415 PF16360 GTP-binding GTPase Middle Region M636_23420 PF12221 Bacterial membrane protein N terminal M636_23420 PF01145 SPFH domain / Band 7 family M636_23425 PF01145 SPFH domain / Band 7 family M636_23430 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) M636_23435 PF00709 Adenylosuccinate synthetase M636_23440 PF08238 Sel1 repeat M636_23445 PF00175 Oxidoreductase NAD-binding domain M636_23445 PF00042 Globin M636_23445 PF00970 Oxidoreductase FAD-binding domain M636_23450 PF02082 Transcriptional regulator M636_23455 PF08461 Ribonuclease R winged-helix domain M636_23455 PF00773 RNB domain M636_23455 PF08206 Ribonuclease B OB domain M636_23455 PF00575 S1 RNA binding domain M636_23455 PF17876 Cold shock domain M636_23460 PF00588 SpoU rRNA Methylase family M636_23460 PF08032 RNA 2'-O ribose methyltransferase substrate binding M636_23465 PF13419 Haloacid dehalogenase-like hydrolase M636_23470 PF00579 tRNA synthetases class I (W and Y) M636_23485 PF00117 Glutamine amidotransferase class-I M636_23490 PF00202 Aminotransferase class-III M636_23495 PF04958 Arginine N-succinyltransferase beta subunit M636_23500 PF00171 Aldehyde dehydrogenase family M636_23510 PF00027 Cyclic nucleotide-binding domain M636_23510 PF13545 Crp-like helix-turn-helix domain M636_23515 PF00485 Phosphoribulokinase / Uridine kinase family M636_23520 PF06794 Uncharacterised protein family (UPF0270) M636_23525 PF00561 alpha/beta hydrolase fold M636_23535 PF00005 ABC transporter M636_23535 PF12848 ABC transporter M636_23540 PF02525 Flavodoxin-like fold M636_23545 PF00999 Sodium/hydrogen exchanger family M636_23545 PF02254 TrkA-N domain M636_23555 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M636_23560 PF01112 Asparaginase M636_23565 PF04102 SlyX M636_23575 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M636_23575 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M636_23580 PF13309 HTH domain M636_23580 PF08348 YheO-like PAS domain M636_23585 PF02635 DsrE/DsrF-like family M636_23590 PF02635 DsrE/DsrF-like family M636_23595 PF04077 DsrH like protein M636_23600 PF00164 Ribosomal protein S12/S23 M636_23605 PF00177 Ribosomal protein S7p/S5e M636_23610 PF03144 Elongation factor Tu domain 2 M636_23610 PF00679 Elongation factor G C-terminus M636_23610 PF14492 Elongation Factor G, domain II M636_23610 PF03764 Elongation factor G, domain IV M636_23610 PF00009 Elongation factor Tu GTP binding domain M636_23615 PF03143 Elongation factor Tu C-terminal domain M636_23615 PF03144 Elongation factor Tu domain 2 M636_23615 PF00009 Elongation factor Tu GTP binding domain M636_23620 PF04324 BFD-like [2Fe-2S] binding domain M636_23625 PF00210 Ferritin-like domain M636_23630 PF00390 Malic enzyme, N-terminal domain M636_23630 PF03949 Malic enzyme, NAD binding domain M636_23635 PF01340 Met Apo-repressor, MetJ M636_23640 PF01053 Cys/Met metabolism PLP-dependent enzyme M636_23645 PF00696 Amino acid kinase family M636_23645 PF00742 Homoserine dehydrogenase M636_23645 PF03447 Homoserine dehydrogenase, NAD binding domain M636_23650 PF02219 Methylenetetrahydrofolate reductase M636_23660 PF00311 Phosphoenolpyruvate carboxylase M636_23665 PF07687 Peptidase dimerisation domain M636_23665 PF01546 Peptidase family M20/M25/M40 M636_23670 PF01118 Semialdehyde dehydrogenase, NAD binding domain M636_23670 PF02774 Semialdehyde dehydrogenase, dimerisation domain M636_23675 PF00696 Amino acid kinase family M636_23680 PF00764 Arginosuccinate synthase M636_23685 PF14698 Argininosuccinate lyase C-terminal M636_23685 PF00206 Lyase M636_23685 PF00583 Acetyltransferase (GNAT) family M636_23700 PF08534 Redoxin M636_23700 PF00462 Glutaredoxin M636_23705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M636_23705 PF03466 LysR substrate binding domain M636_23710 PF00905 Penicillin binding protein transpeptidase domain M636_23710 PF00912 Transglycosylase M636_23710 PF17092 Penicillin-binding protein OB-like domain M636_23735 PF11741 AMIN domain M636_23735 PF03958 Bacterial type II/III secretion system short domain M636_23735 PF00263 Bacterial type II and III secretion system protein M636_23735 PF07660 Secretin and TonB N terminus short domain M636_23740 PF01202 Shikimate kinase M636_23745 PF01761 3-dehydroquinate synthase M636_23755 PF02086 D12 class N6 adenine-specific DNA methyltransferase M636_23760 PF00834 Ribulose-phosphate 3 epimerase family M636_23765 PF01250 Ribosomal protein S6 M636_23770 PF00436 Single-strand binding protein family M636_23775 PF01084 Ribosomal protein S18 M636_23780 PF01281 Ribosomal protein L9, N-terminal domain M636_23780 PF03948 Ribosomal protein L9, C-terminal domain M636_23790 PF00772 DnaB-like helicase N terminal domain M636_23790 PF03796 DnaB-like helicase C terminal domain M636_23795 PF01168 Alanine racemase, N-terminal domain M636_23795 PF00842 Alanine racemase, C-terminal domain M636_23805 PF01894 Uncharacterised protein family UPF0047 M636_23815 PF00342 Phosphoglucose isomerase M636_23825 PF01475 Ferric uptake regulator family M636_23830 PF01207 Dihydrouridine synthase (Dus) M636_23850 PF00667 FAD binding domain M636_23850 PF00258 Flavodoxin M636_23850 PF00175 Oxidoreductase NAD-binding domain M636_23855 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M636_23855 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M636_23860 PF01507 Phosphoadenosine phosphosulfate reductase family