M634_04215 976226ae41bcdc05b5929707add815f1 409 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 12-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 M634_04215 976226ae41bcdc05b5929707add815f1 409 Gene3D G3DSA:3.40.50.1440 5 220 2.4E-80 T 12-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 M634_04215 976226ae41bcdc05b5929707add815f1 409 SUPERFAMILY SSF52490 13 208 8.24E-70 T 12-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 M634_04215 976226ae41bcdc05b5929707add815f1 409 Gene3D G3DSA:3.30.1330.20 221 327 1.0E-34 T 12-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 M634_04215 976226ae41bcdc05b5929707add815f1 409 SUPERFAMILY SSF55307 204 320 7.33E-43 T 12-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 M634_04215 976226ae41bcdc05b5929707add815f1 409 SMART SM00864 13 205 8.2E-113 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 M634_04215 976226ae41bcdc05b5929707add815f1 409 SMART SM00865 207 325 2.9E-56 T 12-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 M634_04215 976226ae41bcdc05b5929707add815f1 409 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 4.0E-40 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 M634_04215 976226ae41bcdc05b5929707add815f1 409 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 331 1.2E-136 T 12-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 M634_04215 976226ae41bcdc05b5929707add815f1 409 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 396 38.212 T 12-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 M634_04215 976226ae41bcdc05b5929707add815f1 409 Pfam PF12327 FtsZ family, C-terminal domain 222 316 2.1E-36 T 12-10-2018 IPR024757 Cell division protein FtsZ, C-terminal M634_04215 976226ae41bcdc05b5929707add815f1 409 PRINTS PR00423 Cell division protein FtsZ signature 126 147 6.1E-52 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 M634_04215 976226ae41bcdc05b5929707add815f1 409 PRINTS PR00423 Cell division protein FtsZ signature 189 211 6.1E-52 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 M634_04215 976226ae41bcdc05b5929707add815f1 409 PRINTS PR00423 Cell division protein FtsZ signature 98 118 6.1E-52 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 M634_04215 976226ae41bcdc05b5929707add815f1 409 PRINTS PR00423 Cell division protein FtsZ signature 212 233 6.1E-52 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 M634_04215 976226ae41bcdc05b5929707add815f1 409 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 12-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 M634_21280 8468c094173ca1e0e6ccac2660d60578 409 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 292 381 4.4E-18 T 12-10-2018 IPR023885 4Fe4S-binding SPASM domain M634_21280 8468c094173ca1e0e6ccac2660d60578 409 Pfam PF13186 Iron-sulfur cluster-binding domain 293 353 1.4E-8 T 12-10-2018 IPR023885 4Fe4S-binding SPASM domain M634_21280 8468c094173ca1e0e6ccac2660d60578 409 Pfam PF13353 4Fe-4S single cluster domain 19 135 1.0E-4 T 12-10-2018 M634_21280 8468c094173ca1e0e6ccac2660d60578 409 Gene3D G3DSA:3.20.20.70 7 402 3.0E-116 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_21280 8468c094173ca1e0e6ccac2660d60578 409 SUPERFAMILY SSF102114 18 362 1.44E-41 T 12-10-2018 M634_21280 8468c094173ca1e0e6ccac2660d60578 409 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 10 399 3.0E-156 T 12-10-2018 M634_21280 8468c094173ca1e0e6ccac2660d60578 409 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 170 403 4.0E-12 T 12-10-2018 M634_21280 8468c094173ca1e0e6ccac2660d60578 409 Pfam PF04055 Radical SAM superfamily 19 186 3.2E-13 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 M634_14495 0b4d3d866b040165624c2df7943abc72 241 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 207 222 4.6E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M634_14495 0b4d3d866b040165624c2df7943abc72 241 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 222 238 4.6E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M634_14495 0b4d3d866b040165624c2df7943abc72 241 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 191 234 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 M634_14495 0b4d3d866b040165624c2df7943abc72 241 SUPERFAMILY SSF46689 142 187 1.66E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_14495 0b4d3d866b040165624c2df7943abc72 241 Gene3D G3DSA:1.10.10.60 137 186 1.2E-11 T 12-10-2018 M634_14495 0b4d3d866b040165624c2df7943abc72 241 Pfam PF12833 Helix-turn-helix domain 161 240 3.9E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_14495 0b4d3d866b040165624c2df7943abc72 241 Gene3D G3DSA:1.10.10.60 187 241 1.5E-20 T 12-10-2018 M634_14495 0b4d3d866b040165624c2df7943abc72 241 SUPERFAMILY SSF46689 191 240 2.73E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_14495 0b4d3d866b040165624c2df7943abc72 241 SMART SM00342 154 238 6.9E-26 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_23880 f4f5cfe46f27d47e9e99d89c08b43fdd 275 SMART SM00342 190 272 7.5E-31 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_23880 f4f5cfe46f27d47e9e99d89c08b43fdd 275 Pfam PF02311 AraC-like ligand binding domain 18 150 8.1E-26 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 M634_23880 f4f5cfe46f27d47e9e99d89c08b43fdd 275 Gene3D G3DSA:1.10.10.60 233 275 6.7E-15 T 12-10-2018 M634_23880 f4f5cfe46f27d47e9e99d89c08b43fdd 275 SUPERFAMILY SSF46689 227 273 1.88E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_23880 f4f5cfe46f27d47e9e99d89c08b43fdd 275 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 227 268 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 M634_23880 f4f5cfe46f27d47e9e99d89c08b43fdd 275 Gene3D G3DSA:1.10.10.60 170 232 4.5E-16 T 12-10-2018 M634_23880 f4f5cfe46f27d47e9e99d89c08b43fdd 275 SUPERFAMILY SSF51215 31 156 1.7E-18 T 12-10-2018 IPR037923 Transcription regulator HTH-like M634_23880 f4f5cfe46f27d47e9e99d89c08b43fdd 275 SUPERFAMILY SSF46689 174 224 2.33E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_23880 f4f5cfe46f27d47e9e99d89c08b43fdd 275 Pfam PF12833 Helix-turn-helix domain 196 273 4.7E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_02915 7a2afd9b0ec68ac6bf714e32329129ae 213 Pfam PF00156 Phosphoribosyl transferase domain 43 161 1.0E-12 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 M634_02915 7a2afd9b0ec68ac6bf714e32329129ae 213 Gene3D G3DSA:3.40.50.2020 1 213 7.0E-80 T 12-10-2018 M634_02915 7a2afd9b0ec68ac6bf714e32329129ae 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 35.971 T 12-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 M634_02915 7a2afd9b0ec68ac6bf714e32329129ae 213 SUPERFAMILY SSF53271 2 211 1.02E-49 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like M634_02915 7a2afd9b0ec68ac6bf714e32329129ae 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 6.3E-69 T 12-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 M634_15985 8a289289bda35a858068c1ae965b40db 298 PIRSF PIRSF038471 2 284 8.8E-83 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 M634_15985 8a289289bda35a858068c1ae965b40db 298 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 274 3.8E-92 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 M634_15985 8a289289bda35a858068c1ae965b40db 298 Gene3D G3DSA:2.40.10.340 122 266 4.2E-37 T 12-10-2018 M634_15985 8a289289bda35a858068c1ae965b40db 298 Gene3D G3DSA:2.40.10.350 180 257 4.2E-37 T 12-10-2018 M634_15985 8a289289bda35a858068c1ae965b40db 298 Pfam PF04085 rod shape-determining protein MreC 123 269 1.4E-40 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 M634_09585 2c68392cbaa27e8e44488a90b37d919d 206 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 9 186 1.1E-81 T 12-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO M634_09585 2c68392cbaa27e8e44488a90b37d919d 206 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 9 188 1.4E-80 T 12-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO M634_09585 2c68392cbaa27e8e44488a90b37d919d 206 SUPERFAMILY SSF46626 21 202 3.32E-27 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_09585 2c68392cbaa27e8e44488a90b37d919d 206 Gene3D G3DSA:1.10.760.10 46 206 3.5E-71 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_17560 4aa3d928a909c1f71c02debee3c1d3f4 817 Gene3D G3DSA:3.40.50.2000 475 797 8.7E-140 T 12-10-2018 M634_17560 4aa3d928a909c1f71c02debee3c1d3f4 817 Gene3D G3DSA:3.40.50.2000 5 474 2.1E-194 T 12-10-2018 M634_17560 4aa3d928a909c1f71c02debee3c1d3f4 817 PIRSF PIRSF000460 1 817 2.1E-214 T 12-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 M634_17560 4aa3d928a909c1f71c02debee3c1d3f4 817 Pfam PF00343 Carbohydrate phosphorylase 99 812 0.0 T 12-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 M634_17560 4aa3d928a909c1f71c02debee3c1d3f4 817 SUPERFAMILY SSF53756 8 815 0.0 T 12-10-2018 M634_17560 4aa3d928a909c1f71c02debee3c1d3f4 817 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 656 668 - T 12-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 M634_17560 4aa3d928a909c1f71c02debee3c1d3f4 817 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 10 812 0.0 T 12-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 M634_20910 9275a38828a2bdbefcd2523f1da3f40c 682 Gene3D G3DSA:3.30.470.130 1 456 4.3E-198 T 12-10-2018 M634_20910 9275a38828a2bdbefcd2523f1da3f40c 682 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 619 636 - T 12-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 M634_20910 9275a38828a2bdbefcd2523f1da3f40c 682 Gene3D G3DSA:2.40.50.100 597 662 1.1E-20 T 12-10-2018 M634_20910 9275a38828a2bdbefcd2523f1da3f40c 682 SUPERFAMILY SSF56059 83 343 1.34E-69 T 12-10-2018 M634_20910 9275a38828a2bdbefcd2523f1da3f40c 682 SUPERFAMILY SSF52440 1 113 1.87E-48 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily M634_20910 9275a38828a2bdbefcd2523f1da3f40c 682 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 3.6E-44 T 12-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 M634_20910 9275a38828a2bdbefcd2523f1da3f40c 682 SMART SM00878 336 448 6.0E-48 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 M634_20910 9275a38828a2bdbefcd2523f1da3f40c 682 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 322 4.7E-81 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 M634_20910 9275a38828a2bdbefcd2523f1da3f40c 682 Pfam PF00364 Biotin-requiring enzyme 603 661 1.3E-15 T 12-10-2018 IPR000089 Biotin/lipoyl attachment M634_20910 9275a38828a2bdbefcd2523f1da3f40c 682 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 M634_20910 9275a38828a2bdbefcd2523f1da3f40c 682 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 M634_20910 9275a38828a2bdbefcd2523f1da3f40c 682 SUPERFAMILY SSF51246 331 451 6.8E-36 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 M634_20910 9275a38828a2bdbefcd2523f1da3f40c 682 SUPERFAMILY SSF51230 587 662 1.96E-19 T 12-10-2018 IPR011053 Single hybrid motif M634_20910 9275a38828a2bdbefcd2523f1da3f40c 682 Pfam PF02785 Biotin carboxylase C-terminal domain 336 447 2.0E-36 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 M634_19145 cd2cd163e6f3d92a1c0c12c6bfa571d2 721 SMART SM00382 356 490 0.0043 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_19145 cd2cd163e6f3d92a1c0c12c6bfa571d2 721 Gene3D G3DSA:3.40.50.300 336 715 4.7E-93 T 12-10-2018 M634_19145 cd2cd163e6f3d92a1c0c12c6bfa571d2 721 Gene3D G3DSA:2.30.30.940 570 648 4.7E-93 T 12-10-2018 M634_19145 cd2cd163e6f3d92a1c0c12c6bfa571d2 721 SUPERFAMILY SSF52540 446 706 4.25E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_19145 cd2cd163e6f3d92a1c0c12c6bfa571d2 721 Pfam PF13538 UvrD-like helicase C-terminal domain 648 693 1.4E-11 T 12-10-2018 IPR027785 UvrD-like helicase C-terminal domain M634_19145 cd2cd163e6f3d92a1c0c12c6bfa571d2 721 Pfam PF13604 AAA domain 343 519 1.5E-41 T 12-10-2018 M634_19145 cd2cd163e6f3d92a1c0c12c6bfa571d2 721 Pfam PF14490 Helix-hairpin-helix containing domain 170 256 2.1E-16 T 12-10-2018 IPR029493 RecD helicase-like helix-hairpin-helix domain M634_19145 cd2cd163e6f3d92a1c0c12c6bfa571d2 721 SUPERFAMILY SSF52540 223 485 1.22E-31 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_19145 cd2cd163e6f3d92a1c0c12c6bfa571d2 721 Gene3D G3DSA:3.40.50.300 495 710 4.7E-93 T 12-10-2018 M634_22210 e6d1a0c6ccf11762932f9a7178c44736 483 SMART SM00116 418 465 8.7 T 12-10-2018 IPR000644 CBS domain M634_22210 e6d1a0c6ccf11762932f9a7178c44736 483 SMART SM00116 320 368 5.6E-4 T 12-10-2018 IPR000644 CBS domain M634_22210 e6d1a0c6ccf11762932f9a7178c44736 483 Gene3D G3DSA:1.20.1080.10 4 270 6.2E-86 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 M634_22210 e6d1a0c6ccf11762932f9a7178c44736 483 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 170 180 - T 12-10-2018 IPR024002 Formate/nitrite transporter, conserved site M634_22210 e6d1a0c6ccf11762932f9a7178c44736 483 SUPERFAMILY SSF54631 311 464 1.87E-21 T 12-10-2018 M634_22210 e6d1a0c6ccf11762932f9a7178c44736 483 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 85 94 - T 12-10-2018 IPR024002 Formate/nitrite transporter, conserved site M634_22210 e6d1a0c6ccf11762932f9a7178c44736 483 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 16 281 2.3E-112 T 12-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 M634_22210 e6d1a0c6ccf11762932f9a7178c44736 483 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 29 281 1.6E-74 T 12-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 M634_22210 e6d1a0c6ccf11762932f9a7178c44736 483 Pfam PF00571 CBS domain 313 365 1.1E-9 T 12-10-2018 IPR000644 CBS domain M634_22210 e6d1a0c6ccf11762932f9a7178c44736 483 Pfam PF00571 CBS domain 382 464 0.0036 T 12-10-2018 IPR000644 CBS domain M634_22210 e6d1a0c6ccf11762932f9a7178c44736 483 Gene3D G3DSA:3.10.580.10 309 467 7.4E-23 T 12-10-2018 M634_22210 e6d1a0c6ccf11762932f9a7178c44736 483 Pfam PF01226 Formate/nitrite transporter 17 277 7.8E-70 T 12-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 M634_00720 8a3488b69de8aa1714d5b467a7db719e 599 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 2.5E-236 T 12-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M634_00720 8a3488b69de8aa1714d5b467a7db719e 599 PIRSF PIRSF000171 1 574 1.4E-45 T 12-10-2018 M634_00720 8a3488b69de8aa1714d5b467a7db719e 599 SUPERFAMILY SSF56425 227 358 3.59E-41 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 M634_00720 8a3488b69de8aa1714d5b467a7db719e 599 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 12-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M634_00720 8a3488b69de8aa1714d5b467a7db719e 599 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 3 582 0.0 T 12-10-2018 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 M634_00720 8a3488b69de8aa1714d5b467a7db719e 599 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 1.6E-37 T 12-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M634_00720 8a3488b69de8aa1714d5b467a7db719e 599 Gene3D G3DSA:4.10.80.40 543 577 1.0E-16 T 12-10-2018 M634_00720 8a3488b69de8aa1714d5b467a7db719e 599 Pfam PF00890 FAD binding domain 7 397 2.0E-113 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 M634_00720 8a3488b69de8aa1714d5b467a7db719e 599 Gene3D G3DSA:1.20.58.100 424 538 1.3E-35 T 12-10-2018 M634_00720 8a3488b69de8aa1714d5b467a7db719e 599 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 8.4E-5 T 12-10-2018 M634_00720 8a3488b69de8aa1714d5b467a7db719e 599 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 8.4E-5 T 12-10-2018 M634_00720 8a3488b69de8aa1714d5b467a7db719e 599 Gene3D G3DSA:3.50.50.60 7 409 3.8E-162 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_00720 8a3488b69de8aa1714d5b467a7db719e 599 SUPERFAMILY SSF51905 3 441 1.56E-74 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_00720 8a3488b69de8aa1714d5b467a7db719e 599 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 4.0E-9 T 12-10-2018 M634_00720 8a3488b69de8aa1714d5b467a7db719e 599 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 4.0E-9 T 12-10-2018 M634_00720 8a3488b69de8aa1714d5b467a7db719e 599 SUPERFAMILY SSF46977 444 581 8.37E-44 T 12-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M634_00720 8a3488b69de8aa1714d5b467a7db719e 599 Gene3D G3DSA:3.90.700.10 237 363 3.8E-162 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 M634_13500 158458de1e28522ef6a72799e03c72e8 68 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 56 3.8E-20 T 12-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 M634_13500 158458de1e28522ef6a72799e03c72e8 68 Pfam PF04995 Heme exporter protein D (CcmD) 13 55 9.0E-17 T 12-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 M634_01655 c2b805e805e5abb6a8d459706eee337e 67 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 4 67 1.3E-16 T 12-10-2018 IPR010035 ThiS, thiamine-biosynthesis M634_01655 c2b805e805e5abb6a8d459706eee337e 67 SUPERFAMILY SSF54285 2 67 2.04E-14 T 12-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp M634_01655 c2b805e805e5abb6a8d459706eee337e 67 Gene3D G3DSA:3.10.20.30 2 67 2.8E-17 T 12-10-2018 IPR012675 Beta-grasp domain superfamily M634_01655 c2b805e805e5abb6a8d459706eee337e 67 Pfam PF02597 ThiS family 8 67 3.3E-13 T 12-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 M634_15790 0108ac24f444563df1014be5cb8cc413 137 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 11 124 29.717 T 12-10-2018 IPR016716 Regulator of ribonuclease activity B M634_15790 0108ac24f444563df1014be5cb8cc413 137 PIRSF PIRSF018193 8 137 1.1E-58 T 12-10-2018 IPR016716 Regulator of ribonuclease activity B M634_15790 0108ac24f444563df1014be5cb8cc413 137 Gene3D G3DSA:3.30.70.970 1 132 1.4E-58 T 12-10-2018 IPR036701 RraB-like superfamily M634_15790 0108ac24f444563df1014be5cb8cc413 137 SUPERFAMILY SSF89946 8 126 3.53E-39 T 12-10-2018 IPR036701 RraB-like superfamily M634_15790 0108ac24f444563df1014be5cb8cc413 137 Pfam PF06877 Regulator of ribonuclease activity B 18 120 2.9E-34 T 12-10-2018 IPR009671 Regulator of ribonuclease activity B domain M634_16675 8b51dcb816fabcae00b1180cd9c9cbed 301 PRINTS PR01021 OMPA domain signature 191 213 3.6E-16 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M634_16675 8b51dcb816fabcae00b1180cd9c9cbed 301 PRINTS PR01021 OMPA domain signature 235 251 3.6E-16 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M634_16675 8b51dcb816fabcae00b1180cd9c9cbed 301 PRINTS PR01021 OMPA domain signature 220 235 3.6E-16 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M634_16675 8b51dcb816fabcae00b1180cd9c9cbed 301 Gene3D G3DSA:3.30.1330.60 42 162 5.8E-25 T 12-10-2018 IPR036737 OmpA-like domain superfamily M634_16675 8b51dcb816fabcae00b1180cd9c9cbed 301 Gene3D G3DSA:3.30.1330.60 175 291 8.7E-26 T 12-10-2018 IPR036737 OmpA-like domain superfamily M634_16675 8b51dcb816fabcae00b1180cd9c9cbed 301 SUPERFAMILY SSF103088 52 162 8.76E-24 T 12-10-2018 IPR036737 OmpA-like domain superfamily M634_16675 8b51dcb816fabcae00b1180cd9c9cbed 301 SUPERFAMILY SSF103088 180 291 1.26E-26 T 12-10-2018 IPR036737 OmpA-like domain superfamily M634_16675 8b51dcb816fabcae00b1180cd9c9cbed 301 Pfam PF00691 OmpA family 62 156 1.6E-16 T 12-10-2018 IPR006665 OmpA-like domain M634_16675 8b51dcb816fabcae00b1180cd9c9cbed 301 Pfam PF00691 OmpA family 191 285 1.1E-17 T 12-10-2018 IPR006665 OmpA-like domain M634_12185 43cd67abe42c80e6589adba2c5d5e6a8 249 SUPERFAMILY SSF52540 16 237 1.15E-75 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_12185 43cd67abe42c80e6589adba2c5d5e6a8 249 Pfam PF00005 ABC transporter 36 184 5.3E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_12185 43cd67abe42c80e6589adba2c5d5e6a8 249 Gene3D G3DSA:3.40.50.300 14 242 4.0E-72 T 12-10-2018 M634_12185 43cd67abe42c80e6589adba2c5d5e6a8 249 SMART SM00382 45 232 6.2E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_12185 43cd67abe42c80e6589adba2c5d5e6a8 249 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_07915 81e2ad3d28dfeaba0dfd5fa9493e8fc5 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 544 554 1.2E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_07915 81e2ad3d28dfeaba0dfd5fa9493e8fc5 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 527 541 1.2E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_07915 81e2ad3d28dfeaba0dfd5fa9493e8fc5 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 555 573 1.2E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_07915 81e2ad3d28dfeaba0dfd5fa9493e8fc5 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 579 592 1.2E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_07915 81e2ad3d28dfeaba0dfd5fa9493e8fc5 600 Gene3D G3DSA:3.40.190.10 123 243 4.0E-19 T 12-10-2018 M634_07915 81e2ad3d28dfeaba0dfd5fa9493e8fc5 600 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 38 280 1.4E-34 T 12-10-2018 M634_07915 81e2ad3d28dfeaba0dfd5fa9493e8fc5 600 SMART SM00388 373 442 4.5E-7 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_07915 81e2ad3d28dfeaba0dfd5fa9493e8fc5 600 Pfam PF00512 His Kinase A (phospho-acceptor) domain 375 436 1.6E-7 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_07915 81e2ad3d28dfeaba0dfd5fa9493e8fc5 600 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 485 593 4.3E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_07915 81e2ad3d28dfeaba0dfd5fa9493e8fc5 600 Gene3D G3DSA:3.30.565.10 441 600 3.5E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_07915 81e2ad3d28dfeaba0dfd5fa9493e8fc5 600 SUPERFAMILY SSF53850 49 276 3.99E-16 T 12-10-2018 M634_07915 81e2ad3d28dfeaba0dfd5fa9493e8fc5 600 SMART SM00387 484 595 1.5E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_07915 81e2ad3d28dfeaba0dfd5fa9493e8fc5 600 SUPERFAMILY SSF47384 365 436 3.73E-9 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M634_07915 81e2ad3d28dfeaba0dfd5fa9493e8fc5 600 Gene3D G3DSA:1.10.287.130 379 439 1.6E-16 T 12-10-2018 M634_07915 81e2ad3d28dfeaba0dfd5fa9493e8fc5 600 Gene3D G3DSA:3.40.190.10 38 271 4.0E-19 T 12-10-2018 M634_07915 81e2ad3d28dfeaba0dfd5fa9493e8fc5 600 SUPERFAMILY SSF55874 428 593 1.57E-32 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_20935 8ee6c335d74fbe0e9a8271c9226022e5 392 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 85 103 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 M634_20935 8ee6c335d74fbe0e9a8271c9226022e5 392 SUPERFAMILY SSF53901 5 268 3.05E-75 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M634_20935 8ee6c335d74fbe0e9a8271c9226022e5 392 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 390 1.6E-131 T 12-10-2018 IPR002155 Thiolase GO:0016747 M634_20935 8ee6c335d74fbe0e9a8271c9226022e5 392 PIRSF PIRSF000429 1 392 3.0E-113 T 12-10-2018 IPR002155 Thiolase GO:0016747 M634_20935 8ee6c335d74fbe0e9a8271c9226022e5 392 SUPERFAMILY SSF53901 270 390 1.76E-40 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M634_20935 8ee6c335d74fbe0e9a8271c9226022e5 392 Gene3D G3DSA:3.40.47.10 7 275 5.1E-143 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M634_20935 8ee6c335d74fbe0e9a8271c9226022e5 392 Pfam PF02803 Thiolase, C-terminal domain 270 390 1.5E-44 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 M634_20935 8ee6c335d74fbe0e9a8271c9226022e5 392 ProSitePatterns PS00099 Thiolases active site. 373 386 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 M634_20935 8ee6c335d74fbe0e9a8271c9226022e5 392 Gene3D G3DSA:3.40.47.10 127 389 5.1E-143 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M634_20935 8ee6c335d74fbe0e9a8271c9226022e5 392 Pfam PF00108 Thiolase, N-terminal domain 6 260 6.0E-85 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 M634_05245 e0b291b37165bae2a8e41d2c8ebd050c 1302 SUPERFAMILY SSF56042 432 615 4.34E-53 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily M634_05245 e0b291b37165bae2a8e41d2c8ebd050c 1302 Gene3D G3DSA:3.90.650.10 818 987 1.4E-31 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily M634_05245 e0b291b37165bae2a8e41d2c8ebd050c 1302 Gene3D G3DSA:3.30.1330.10 614 812 3.2E-26 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily M634_05245 e0b291b37165bae2a8e41d2c8ebd050c 1302 Pfam PF02769 AIR synthase related protein, C-terminal domain 432 589 7.0E-28 T 12-10-2018 IPR010918 PurM-like, C-terminal domain M634_05245 e0b291b37165bae2a8e41d2c8ebd050c 1302 Pfam PF02769 AIR synthase related protein, C-terminal domain 840 973 2.5E-14 T 12-10-2018 IPR010918 PurM-like, C-terminal domain M634_05245 e0b291b37165bae2a8e41d2c8ebd050c 1302 SUPERFAMILY SSF56042 830 1040 7.48E-56 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily M634_05245 e0b291b37165bae2a8e41d2c8ebd050c 1302 SUPERFAMILY SSF55326 619 816 8.37E-69 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily M634_05245 e0b291b37165bae2a8e41d2c8ebd050c 1302 SUPERFAMILY SSF82697 1 150 1.73E-49 T 12-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 M634_05245 e0b291b37165bae2a8e41d2c8ebd050c 1302 Gene3D G3DSA:3.40.50.880 988 1302 8.1E-142 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M634_05245 e0b291b37165bae2a8e41d2c8ebd050c 1302 Gene3D G3DSA:3.30.1330.10 214 419 1.8E-41 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily M634_05245 e0b291b37165bae2a8e41d2c8ebd050c 1302 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1300 0.0 T 12-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 M634_05245 e0b291b37165bae2a8e41d2c8ebd050c 1302 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1302 21.339 T 12-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 M634_05245 e0b291b37165bae2a8e41d2c8ebd050c 1302 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1046 1299 9.8E-108 T 12-10-2018 M634_05245 e0b291b37165bae2a8e41d2c8ebd050c 1302 SMART SM01211 1046 1301 7.2E-161 T 12-10-2018 M634_05245 e0b291b37165bae2a8e41d2c8ebd050c 1302 SUPERFAMILY SSF109736 155 220 1.2E-21 T 12-10-2018 M634_05245 e0b291b37165bae2a8e41d2c8ebd050c 1302 Gene3D G3DSA:1.10.8.750 153 213 7.2E-28 T 12-10-2018 M634_05245 e0b291b37165bae2a8e41d2c8ebd050c 1302 Gene3D G3DSA:3.90.650.10 420 606 3.2E-59 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily M634_05245 e0b291b37165bae2a8e41d2c8ebd050c 1302 SUPERFAMILY SSF52317 1042 1300 1.38E-100 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M634_05245 e0b291b37165bae2a8e41d2c8ebd050c 1302 SUPERFAMILY SSF55326 221 428 9.42E-66 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily M634_07295 5e5d49f6725900b73d817a85124eb5b9 174 PRINTS PR01021 OMPA domain signature 74 96 9.4E-17 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M634_07295 5e5d49f6725900b73d817a85124eb5b9 174 PRINTS PR01021 OMPA domain signature 119 135 9.4E-17 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M634_07295 5e5d49f6725900b73d817a85124eb5b9 174 PRINTS PR01021 OMPA domain signature 104 119 9.4E-17 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M634_07295 5e5d49f6725900b73d817a85124eb5b9 174 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 5 174 30.802 T 12-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 M634_07295 5e5d49f6725900b73d817a85124eb5b9 174 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 71 174 2.5E-44 T 12-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 M634_07295 5e5d49f6725900b73d817a85124eb5b9 174 Pfam PF00691 OmpA family 73 168 5.4E-23 T 12-10-2018 IPR006665 OmpA-like domain M634_07295 5e5d49f6725900b73d817a85124eb5b9 174 SUPERFAMILY SSF103088 57 173 9.03E-34 T 12-10-2018 IPR036737 OmpA-like domain superfamily M634_07295 5e5d49f6725900b73d817a85124eb5b9 174 ProSitePatterns PS01068 OmpA-like domain. 106 150 - T 12-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 M634_07295 5e5d49f6725900b73d817a85124eb5b9 174 Gene3D G3DSA:3.30.1330.60 45 174 1.0E-40 T 12-10-2018 IPR036737 OmpA-like domain superfamily M634_12050 37ddbcda4d4785d9c5da5a8783cc0a80 393 Pfam PF17327 Acyl homoserine lactone synthase 18 388 1.2E-154 T 12-10-2018 IPR035304 Acyl homoserine lactone synthase GO:0009372|GO:0061579 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 M634_12050 37ddbcda4d4785d9c5da5a8783cc0a80 393 ProDom PD037532 SYNTHASE LACTONE HOMOSERINE AUTOINDUCER N-OCTANOYL VANM AINS LUXM SYNTHESIS 183 385 2.0E-119 T 12-10-2018 IPR020384 Homoserine lactone synthase LuxM/VanM, C-terminal GO:0016747 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 M634_12050 37ddbcda4d4785d9c5da5a8783cc0a80 393 ProDom PD097636 LACTONE SYNTHASE HOMOSERINE VANM AUTOINDUCER SYNTHESIS LUXL 1 157 1.0E-86 T 12-10-2018 IPR020374 Homoserine lactone synthase LuxM/VanM, N-terminal GO:0016747 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 M634_17185 fbdabf3c05b58b0f7f02761e03465ae0 265 SUPERFAMILY SSF141868 30 257 1.83E-9 T 12-10-2018 IPR035919 EAL domain superfamily M634_17185 fbdabf3c05b58b0f7f02761e03465ae0 265 Pfam PF00563 EAL domain 30 250 1.5E-9 T 12-10-2018 IPR001633 EAL domain M634_17185 fbdabf3c05b58b0f7f02761e03465ae0 265 Gene3D G3DSA:3.20.20.450 26 260 2.1E-9 T 12-10-2018 IPR035919 EAL domain superfamily M634_19160 8c6840ebd79863b730d4979bf9771418 881 Pfam PF13009 Putative phage integrase 26 375 1.5E-120 T 12-10-2018 IPR024965 Putative phage integrase M634_21255 58d15add3b1ce0a2da172776aa8b61f6 515 Gene3D G3DSA:3.30.1120.10 395 453 4.1E-96 T 12-10-2018 M634_21255 58d15add3b1ce0a2da172776aa8b61f6 515 Gene3D G3DSA:3.40.720.10 27 394 4.1E-96 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 M634_21255 58d15add3b1ce0a2da172776aa8b61f6 515 Pfam PF00884 Sulfatase 27 351 1.4E-59 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 M634_21255 58d15add3b1ce0a2da172776aa8b61f6 515 SUPERFAMILY SSF53649 23 498 6.11E-121 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 M634_12440 c62d2a7a1fd6f9c920260464f84d1fdc 320 Pfam PF13177 DNA polymerase III, delta subunit 11 164 2.7E-44 T 12-10-2018 M634_12440 c62d2a7a1fd6f9c920260464f84d1fdc 320 Gene3D G3DSA:3.40.50.300 3 167 2.3E-49 T 12-10-2018 M634_12440 c62d2a7a1fd6f9c920260464f84d1fdc 320 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 206 314 3.0E-20 T 12-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_12440 c62d2a7a1fd6f9c920260464f84d1fdc 320 SUPERFAMILY SSF52540 2 179 6.48E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_12440 c62d2a7a1fd6f9c920260464f84d1fdc 320 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 12 198 4.7E-64 T 12-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_12440 c62d2a7a1fd6f9c920260464f84d1fdc 320 SUPERFAMILY SSF48019 208 319 7.82E-14 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 M634_02380 22f8adc194bd03375935d0eeae30559c 141 SUPERFAMILY SSF52402 3 139 6.2E-34 T 12-10-2018 M634_02380 22f8adc194bd03375935d0eeae30559c 141 PIRSF PIRSF006276 1 141 2.6E-53 T 12-10-2018 IPR006015 Universal stress protein A M634_02380 22f8adc194bd03375935d0eeae30559c 141 Gene3D G3DSA:3.40.50.620 2 141 3.6E-49 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M634_02380 22f8adc194bd03375935d0eeae30559c 141 Pfam PF00582 Universal stress protein family 3 138 6.5E-22 T 12-10-2018 IPR006016 UspA M634_08370 e725e5b4ae7b57d9f0f28294dd60d535 801 SUPERFAMILY SSF46955 403 475 1.19E-19 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily M634_08370 e725e5b4ae7b57d9f0f28294dd60d535 801 SMART SM00896 707 800 6.4E-45 T 12-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 M634_08370 e725e5b4ae7b57d9f0f28294dd60d535 801 Gene3D G3DSA:3.30.56.10 401 475 8.8E-26 T 12-10-2018 M634_08370 e725e5b4ae7b57d9f0f28294dd60d535 801 SMART SM00873 212 385 3.3E-100 T 12-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 M634_08370 e725e5b4ae7b57d9f0f28294dd60d535 801 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 800 6.4E-277 T 12-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 M634_08370 e725e5b4ae7b57d9f0f28294dd60d535 801 Gene3D G3DSA:3.30.70.380 708 801 1.6E-29 T 12-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 M634_08370 e725e5b4ae7b57d9f0f28294dd60d535 801 Gene3D G3DSA:3.30.56.10 7 179 2.1E-70 T 12-10-2018 M634_08370 e725e5b4ae7b57d9f0f28294dd60d535 801 SUPERFAMILY SSF55681 467 695 4.37E-49 T 12-10-2018 M634_08370 e725e5b4ae7b57d9f0f28294dd60d535 801 Gene3D G3DSA:2.40.50.140 39 154 2.1E-70 T 12-10-2018 M634_08370 e725e5b4ae7b57d9f0f28294dd60d535 801 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 794 46.935 T 12-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 M634_08370 e725e5b4ae7b57d9f0f28294dd60d535 801 SUPERFAMILY SSF50249 38 196 1.37E-47 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_08370 e725e5b4ae7b57d9f0f28294dd60d535 801 Pfam PF03483 B3/4 domain 212 385 1.0E-71 T 12-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 M634_08370 e725e5b4ae7b57d9f0f28294dd60d535 801 Pfam PF03147 Ferredoxin-fold anticodon binding domain 707 800 1.1E-28 T 12-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 M634_08370 e725e5b4ae7b57d9f0f28294dd60d535 801 SUPERFAMILY SSF56037 196 394 1.02E-77 T 12-10-2018 M634_08370 e725e5b4ae7b57d9f0f28294dd60d535 801 SMART SM00874 403 471 4.8E-29 T 12-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 M634_08370 e725e5b4ae7b57d9f0f28294dd60d535 801 SUPERFAMILY SSF54991 703 800 3.27E-30 T 12-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 M634_08370 e725e5b4ae7b57d9f0f28294dd60d535 801 Pfam PF01588 Putative tRNA binding domain 45 145 8.3E-26 T 12-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 M634_08370 e725e5b4ae7b57d9f0f28294dd60d535 801 Gene3D G3DSA:3.50.40.10 197 395 1.3E-83 T 12-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 M634_08370 e725e5b4ae7b57d9f0f28294dd60d535 801 Pfam PF03484 tRNA synthetase B5 domain 406 471 3.2E-17 T 12-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 M634_08370 e725e5b4ae7b57d9f0f28294dd60d535 801 Gene3D G3DSA:3.30.930.10 486 697 2.4E-60 T 12-10-2018 M634_07760 36f7ae466fc1e59bfa8839a008a648c3 295 Gene3D G3DSA:1.10.3720.10 85 291 3.8E-18 T 12-10-2018 IPR035906 MetI-like superfamily M634_07760 36f7ae466fc1e59bfa8839a008a648c3 295 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 65 7.5E-13 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain M634_07760 36f7ae466fc1e59bfa8839a008a648c3 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 293 1.0E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_07760 36f7ae466fc1e59bfa8839a008a648c3 295 SUPERFAMILY SSF161098 89 276 7.98E-22 T 12-10-2018 IPR035906 MetI-like superfamily M634_00360 e4804df6c9002d929b7e6b9c7e300a2d 131 SUPERFAMILY SSF75169 6 131 1.02E-38 T 12-10-2018 IPR027396 DsrEFH-like M634_00360 e4804df6c9002d929b7e6b9c7e300a2d 131 Gene3D G3DSA:3.40.1260.10 1 131 9.0E-53 T 12-10-2018 IPR027396 DsrEFH-like M634_00360 e4804df6c9002d929b7e6b9c7e300a2d 131 Pfam PF02635 DsrE/DsrF-like family 6 131 6.5E-28 T 12-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein M634_00360 e4804df6c9002d929b7e6b9c7e300a2d 131 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 5 131 5.6E-55 T 12-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 M634_21570 ad174b31a766e7ba7453449d8328ee6a 421 Gene3D G3DSA:3.30.450.380 2 166 5.0E-37 T 12-10-2018 M634_21570 ad174b31a766e7ba7453449d8328ee6a 421 Pfam PF00437 Type II/IV secretion system protein 71 347 7.7E-82 T 12-10-2018 IPR001482 Type II/IV secretion system protein M634_21570 ad174b31a766e7ba7453449d8328ee6a 421 Gene3D G3DSA:3.40.50.300 168 408 3.5E-72 T 12-10-2018 M634_21570 ad174b31a766e7ba7453449d8328ee6a 421 SUPERFAMILY SSF52540 56 364 2.47E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_07015 0020405b5b9927b363b676ce4a81f52d 268 Gene3D G3DSA:3.60.10.10 1 268 2.4E-78 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily M634_07015 0020405b5b9927b363b676ce4a81f52d 268 SUPERFAMILY SSF56219 1 268 3.8E-86 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily M634_07015 0020405b5b9927b363b676ce4a81f52d 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 12-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 M634_07015 0020405b5b9927b363b676ce4a81f52d 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 267 2.8E-87 T 12-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 M634_07015 0020405b5b9927b363b676ce4a81f52d 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 260 4.2E-20 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase M634_07015 0020405b5b9927b363b676ce4a81f52d 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 267 1.0E-100 T 12-10-2018 M634_07015 0020405b5b9927b363b676ce4a81f52d 268 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 198 214 - T 12-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 M634_02715 d8da34c275f2ee3c12d1cd05458540db 253 Pfam PF01203 Type II secretion system (T2SS), protein N 36 247 1.2E-57 T 12-10-2018 IPR022792 Type II secretion system, protein N M634_03355 51526b9d4525cb8bb0791f4296c2a808 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.665 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 M634_03355 51526b9d4525cb8bb0791f4296c2a808 177 SUPERFAMILY SSF56053 83 177 9.68E-36 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03355 51526b9d4525cb8bb0791f4296c2a808 177 SUPERFAMILY SSF56053 1 82 5.23E-25 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03355 51526b9d4525cb8bb0791f4296c2a808 177 Pfam PF00347 Ribosomal protein L6 91 164 1.1E-18 T 12-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03355 51526b9d4525cb8bb0791f4296c2a808 177 Pfam PF00347 Ribosomal protein L6 11 82 2.8E-20 T 12-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03355 51526b9d4525cb8bb0791f4296c2a808 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.4E-33 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 M634_03355 51526b9d4525cb8bb0791f4296c2a808 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.4E-33 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 M634_03355 51526b9d4525cb8bb0791f4296c2a808 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.4E-33 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 M634_03355 51526b9d4525cb8bb0791f4296c2a808 177 PIRSF PIRSF002162 1 177 2.7E-46 T 12-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03355 51526b9d4525cb8bb0791f4296c2a808 177 Gene3D G3DSA:3.90.930.12 83 177 2.0E-39 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03355 51526b9d4525cb8bb0791f4296c2a808 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 12-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_03355 51526b9d4525cb8bb0791f4296c2a808 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.3E-74 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 M634_03355 51526b9d4525cb8bb0791f4296c2a808 177 Gene3D G3DSA:3.90.930.12 1 82 6.7E-31 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_01435 a62fc6368eb4808b22adf395aa2367aa 276 Gene3D G3DSA:3.10.310.10 117 263 1.1E-106 T 12-10-2018 M634_01435 a62fc6368eb4808b22adf395aa2367aa 276 Pfam PF01678 Diaminopimelate epimerase 154 269 5.1E-31 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 M634_01435 a62fc6368eb4808b22adf395aa2367aa 276 Pfam PF01678 Diaminopimelate epimerase 5 125 9.8E-34 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 M634_01435 a62fc6368eb4808b22adf395aa2367aa 276 SUPERFAMILY SSF54506 2 274 1.01E-52 T 12-10-2018 M634_01435 a62fc6368eb4808b22adf395aa2367aa 276 Gene3D G3DSA:3.10.310.10 5 272 1.1E-106 T 12-10-2018 M634_01435 a62fc6368eb4808b22adf395aa2367aa 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 2.5E-101 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 M634_01435 a62fc6368eb4808b22adf395aa2367aa 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 12-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 M634_01435 a62fc6368eb4808b22adf395aa2367aa 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 39.622 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 M634_00465 24f62fc70dce9e5a07c2c0a670a5f721 984 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 514 836 5.5E-8 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase M634_00465 24f62fc70dce9e5a07c2c0a670a5f721 984 Pfam PF00932 Lamin Tail Domain 20 130 2.3E-15 T 12-10-2018 IPR001322 Lamin tail domain M634_00465 24f62fc70dce9e5a07c2c0a670a5f721 984 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 963 983 0.0033 T 12-10-2018 IPR020008 GlyGly-CTERM domain M634_00465 24f62fc70dce9e5a07c2c0a670a5f721 984 SUPERFAMILY SSF56219 474 844 6.77E-35 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily M634_03625 98ce6ed3011d0d138e7117ce38d3d1cb 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 2.0E-18 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03625 98ce6ed3011d0d138e7117ce38d3d1cb 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 12-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_03625 98ce6ed3011d0d138e7117ce38d3d1cb 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.456 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03625 98ce6ed3011d0d138e7117ce38d3d1cb 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 2.7E-39 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03625 98ce6ed3011d0d138e7117ce38d3d1cb 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 2.7E-39 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03625 98ce6ed3011d0d138e7117ce38d3d1cb 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 2.7E-39 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03625 98ce6ed3011d0d138e7117ce38d3d1cb 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 1.4E-43 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03625 98ce6ed3011d0d138e7117ce38d3d1cb 85 Gene3D G3DSA:2.40.50.100 21 85 1.1E-31 T 12-10-2018 M634_03625 98ce6ed3011d0d138e7117ce38d3d1cb 85 Pfam PF01016 Ribosomal L27 protein 2 82 9.4E-40 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03625 98ce6ed3011d0d138e7117ce38d3d1cb 85 SUPERFAMILY SSF110324 2 80 1.01E-34 T 12-10-2018 M634_23355 c012f8d67d70bdb0fc61845cca4d0afd 247 SUPERFAMILY SSF53850 1 246 5.59E-69 T 12-10-2018 M634_23355 c012f8d67d70bdb0fc61845cca4d0afd 247 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 245 2.6E-82 T 12-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 M634_23355 c012f8d67d70bdb0fc61845cca4d0afd 247 Gene3D G3DSA:3.40.190.10 30 244 4.7E-77 T 12-10-2018 M634_23355 c012f8d67d70bdb0fc61845cca4d0afd 247 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 247 6.7E-65 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M634_23355 c012f8d67d70bdb0fc61845cca4d0afd 247 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 49 62 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site M634_23355 c012f8d67d70bdb0fc61845cca4d0afd 247 SMART SM00062 26 247 5.0E-75 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M634_23355 c012f8d67d70bdb0fc61845cca4d0afd 247 SMART SM00079 26 247 0.0085 T 12-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 M634_23355 c012f8d67d70bdb0fc61845cca4d0afd 247 Gene3D G3DSA:3.40.190.10 113 205 4.7E-77 T 12-10-2018 M634_02185 312463128da5ad3db65af7c423a47f95 368 SUPERFAMILY SSF111369 58 273 1.44E-42 T 12-10-2018 M634_02185 312463128da5ad3db65af7c423a47f95 368 Gene3D G3DSA:2.40.30.170 58 279 2.2E-74 T 12-10-2018 M634_02185 312463128da5ad3db65af7c423a47f95 368 Gene3D G3DSA:2.40.50.100 68 196 2.2E-74 T 12-10-2018 M634_02185 312463128da5ad3db65af7c423a47f95 368 Gene3D G3DSA:1.10.287.470 103 162 2.2E-74 T 12-10-2018 M634_02185 312463128da5ad3db65af7c423a47f95 368 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 269 2.5E-29 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M634_02185 312463128da5ad3db65af7c423a47f95 368 Gene3D G3DSA:2.40.420.20 280 351 2.2E-74 T 12-10-2018 M634_02185 312463128da5ad3db65af7c423a47f95 368 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 353 1.3E-74 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 M634_09605 f85d5a72b8be97ccab5eff59d6f9ea5b 787 Gene3D G3DSA:3.40.1110.10 511 614 1.4E-65 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 M634_09605 f85d5a72b8be97ccab5eff59d6f9ea5b 787 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 4 86 4.4E-27 T 12-10-2018 IPR021993 Putative metal-binding domain of cation transport ATPase M634_09605 f85d5a72b8be97ccab5eff59d6f9ea5b 787 Pfam PF00122 E1-E2 ATPase 318 478 2.2E-46 T 12-10-2018 M634_09605 f85d5a72b8be97ccab5eff59d6f9ea5b 787 Gene3D G3DSA:3.30.70.100 89 173 6.7E-14 T 12-10-2018 M634_09605 f85d5a72b8be97ccab5eff59d6f9ea5b 787 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 245 783 8.1E-159 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 M634_09605 f85d5a72b8be97ccab5eff59d6f9ea5b 787 SUPERFAMILY SSF55008 85 162 1.7E-17 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 M634_09605 f85d5a72b8be97ccab5eff59d6f9ea5b 787 SUPERFAMILY SSF56784 500 781 4.5E-47 T 12-10-2018 IPR036412 HAD-like superfamily M634_09605 f85d5a72b8be97ccab5eff59d6f9ea5b 787 PRINTS PR00943 Copper-transporting ATPase signature 135 155 4.9E-6 T 12-10-2018 M634_09605 f85d5a72b8be97ccab5eff59d6f9ea5b 787 PRINTS PR00943 Copper-transporting ATPase signature 296 314 4.9E-6 T 12-10-2018 M634_09605 f85d5a72b8be97ccab5eff59d6f9ea5b 787 PRINTS PR00943 Copper-transporting ATPase signature 659 676 4.9E-6 T 12-10-2018 M634_09605 f85d5a72b8be97ccab5eff59d6f9ea5b 787 PRINTS PR00943 Copper-transporting ATPase signature 276 295 4.9E-6 T 12-10-2018 M634_09605 f85d5a72b8be97ccab5eff59d6f9ea5b 787 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 279 761 7.8E-75 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 M634_09605 f85d5a72b8be97ccab5eff59d6f9ea5b 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 353 367 4.6E-24 T 12-10-2018 M634_09605 f85d5a72b8be97ccab5eff59d6f9ea5b 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 704 716 4.6E-24 T 12-10-2018 M634_09605 f85d5a72b8be97ccab5eff59d6f9ea5b 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 629 639 4.6E-24 T 12-10-2018 M634_09605 f85d5a72b8be97ccab5eff59d6f9ea5b 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 681 700 4.6E-24 T 12-10-2018 M634_09605 f85d5a72b8be97ccab5eff59d6f9ea5b 787 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 501 515 4.6E-24 T 12-10-2018 M634_09605 f85d5a72b8be97ccab5eff59d6f9ea5b 787 Pfam PF00702 haloacid dehalogenase-like hydrolase 497 694 1.7E-28 T 12-10-2018 M634_09605 f85d5a72b8be97ccab5eff59d6f9ea5b 787 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 273 785 7.2E-121 T 12-10-2018 M634_09605 f85d5a72b8be97ccab5eff59d6f9ea5b 787 SUPERFAMILY SSF81665 250 766 3.79E-12 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 M634_09605 f85d5a72b8be97ccab5eff59d6f9ea5b 787 SUPERFAMILY SSF81653 318 402 1.06E-22 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 M634_09605 f85d5a72b8be97ccab5eff59d6f9ea5b 787 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 228 783 3.3E-152 T 12-10-2018 M634_09605 f85d5a72b8be97ccab5eff59d6f9ea5b 787 ProSitePatterns PS01229 Hypothetical cof family signature 2. 681 703 - T 12-10-2018 M634_09605 f85d5a72b8be97ccab5eff59d6f9ea5b 787 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 503 509 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 M634_09605 f85d5a72b8be97ccab5eff59d6f9ea5b 787 Gene3D G3DSA:3.40.50.1000 482 720 1.4E-65 T 12-10-2018 IPR023214 HAD superfamily M634_09605 f85d5a72b8be97ccab5eff59d6f9ea5b 787 Gene3D G3DSA:2.70.150.20 292 407 7.9E-33 T 12-10-2018 M634_09605 f85d5a72b8be97ccab5eff59d6f9ea5b 787 Pfam PF00403 Heavy-metal-associated domain 93 154 1.9E-8 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 M634_09245 3e750562a9a7fd11e101ae81464d1786 625 Gene3D G3DSA:3.30.300.30 497 624 2.0E-24 T 12-10-2018 M634_09245 3e750562a9a7fd11e101ae81464d1786 625 Pfam PF00501 AMP-binding enzyme 65 501 1.2E-83 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 M634_09245 3e750562a9a7fd11e101ae81464d1786 625 Gene3D G3DSA:3.40.50.12780 33 494 5.6E-103 T 12-10-2018 M634_09245 3e750562a9a7fd11e101ae81464d1786 625 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 4 56 2.9E-11 T 12-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 M634_09245 3e750562a9a7fd11e101ae81464d1786 625 Pfam PF13193 AMP-binding enzyme C-terminal domain 510 589 3.2E-25 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain M634_09245 3e750562a9a7fd11e101ae81464d1786 625 ProSitePatterns PS00455 Putative AMP-binding domain signature. 237 248 - T 12-10-2018 IPR020845 AMP-binding, conserved site M634_09245 3e750562a9a7fd11e101ae81464d1786 625 SUPERFAMILY SSF56801 3 617 4.19E-154 T 12-10-2018 M634_23945 d9cf0f06d39cc13411f68c726ab8c771 427 Pfam PF04225 Opacity-associated protein A LysM-like domain 73 154 3.1E-6 T 12-10-2018 IPR007340 Opacity-associated protein A M634_23945 d9cf0f06d39cc13411f68c726ab8c771 427 Gene3D G3DSA:3.10.450.350 66 158 3.8E-33 T 12-10-2018 M634_23945 d9cf0f06d39cc13411f68c726ab8c771 427 Gene3D G3DSA:2.70.70.10 265 395 5.9E-50 T 12-10-2018 IPR011055 Duplicated hybrid motif M634_23945 d9cf0f06d39cc13411f68c726ab8c771 427 Pfam PF01551 Peptidase family M23 295 388 9.7E-33 T 12-10-2018 IPR016047 Peptidase M23 M634_23945 d9cf0f06d39cc13411f68c726ab8c771 427 SUPERFAMILY SSF51261 143 390 4.55E-69 T 12-10-2018 IPR011055 Duplicated hybrid motif M634_23945 d9cf0f06d39cc13411f68c726ab8c771 427 Gene3D G3DSA:3.10.450.350 160 264 1.2E-33 T 12-10-2018 M634_11730 e3b1e5baea22d43c72fe68683e271fe2 627 Gene3D G3DSA:3.30.450.20 50 264 6.3E-55 T 12-10-2018 M634_11730 e3b1e5baea22d43c72fe68683e271fe2 627 Pfam PF00672 HAMP domain 300 346 1.6E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_11730 e3b1e5baea22d43c72fe68683e271fe2 627 Gene3D G3DSA:1.10.287.950 297 627 2.6E-73 T 12-10-2018 M634_11730 e3b1e5baea22d43c72fe68683e271fe2 627 SMART SM00304 296 350 3.4E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_11730 e3b1e5baea22d43c72fe68683e271fe2 627 SMART SM00304 353 403 4.3 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_11730 e3b1e5baea22d43c72fe68683e271fe2 627 Gene3D G3DSA:3.30.450.20 60 168 6.3E-55 T 12-10-2018 M634_11730 e3b1e5baea22d43c72fe68683e271fe2 627 SUPERFAMILY SSF58104 318 627 9.02E-77 T 12-10-2018 M634_11730 e3b1e5baea22d43c72fe68683e271fe2 627 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 426 593 1.0E-39 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_11730 e3b1e5baea22d43c72fe68683e271fe2 627 SUPERFAMILY SSF103190 89 175 2.62E-12 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily M634_11730 e3b1e5baea22d43c72fe68683e271fe2 627 SMART SM00283 365 626 7.1E-65 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_11730 e3b1e5baea22d43c72fe68683e271fe2 627 Pfam PF02743 Cache domain 41 258 1.4E-33 T 12-10-2018 IPR033479 Double Cache domain 1 M634_16635 770340a8b33958e3454682adaa66ef7e 232 SUPERFAMILY SSF46894 147 224 2.72E-17 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M634_16635 770340a8b33958e3454682adaa66ef7e 232 Gene3D G3DSA:3.40.50.2300 1 123 2.4E-32 T 12-10-2018 M634_16635 770340a8b33958e3454682adaa66ef7e 232 SMART SM00862 148 224 2.6E-16 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_16635 770340a8b33958e3454682adaa66ef7e 232 SMART SM00448 3 113 5.8E-35 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_16635 770340a8b33958e3454682adaa66ef7e 232 Gene3D G3DSA:1.10.10.10 124 232 1.5E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_16635 770340a8b33958e3454682adaa66ef7e 232 Pfam PF00072 Response regulator receiver domain 5 114 1.4E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_16635 770340a8b33958e3454682adaa66ef7e 232 SUPERFAMILY SSF52172 3 166 1.11E-35 T 12-10-2018 IPR011006 CheY-like superfamily M634_16635 770340a8b33958e3454682adaa66ef7e 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 224 9.8E-18 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_21100 131229aa7d515995eefbe268cbd7d9fe 787 Gene3D G3DSA:3.20.20.450 518 771 6.5E-73 T 12-10-2018 IPR035919 EAL domain superfamily M634_21100 131229aa7d515995eefbe268cbd7d9fe 787 Gene3D G3DSA:3.30.70.270 334 517 5.6E-46 T 12-10-2018 M634_21100 131229aa7d515995eefbe268cbd7d9fe 787 SMART SM00052 516 759 1.5E-64 T 12-10-2018 IPR001633 EAL domain M634_21100 131229aa7d515995eefbe268cbd7d9fe 787 Pfam PF00563 EAL domain 522 754 7.1E-62 T 12-10-2018 IPR001633 EAL domain M634_21100 131229aa7d515995eefbe268cbd7d9fe 787 SMART SM00267 329 506 2.2E-42 T 12-10-2018 IPR000160 GGDEF domain M634_21100 131229aa7d515995eefbe268cbd7d9fe 787 Pfam PF00990 Diguanylate cyclase, GGDEF domain 340 502 2.1E-35 T 12-10-2018 IPR000160 GGDEF domain M634_21100 131229aa7d515995eefbe268cbd7d9fe 787 SUPERFAMILY SSF55073 345 507 2.82E-37 T 12-10-2018 IPR029787 Nucleotide cyclase M634_21100 131229aa7d515995eefbe268cbd7d9fe 787 SUPERFAMILY SSF141868 521 766 2.22E-67 T 12-10-2018 IPR035919 EAL domain superfamily M634_21100 131229aa7d515995eefbe268cbd7d9fe 787 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 338 505 5.8E-31 T 12-10-2018 IPR000160 GGDEF domain M634_21040 a417583ee8fc59d8cfb8a38d6edd3b59 785 Gene3D G3DSA:3.40.50.2300 497 641 1.5E-32 T 12-10-2018 M634_21040 a417583ee8fc59d8cfb8a38d6edd3b59 785 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 381 491 1.3E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_21040 a417583ee8fc59d8cfb8a38d6edd3b59 785 Gene3D G3DSA:3.30.565.10 334 496 8.5E-49 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_21040 a417583ee8fc59d8cfb8a38d6edd3b59 785 SUPERFAMILY SSF52172 513 643 1.71E-30 T 12-10-2018 IPR011006 CheY-like superfamily M634_21040 a417583ee8fc59d8cfb8a38d6edd3b59 785 SMART SM00448 515 627 5.5E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_21040 a417583ee8fc59d8cfb8a38d6edd3b59 785 Gene3D G3DSA:1.20.120.160 659 769 2.2E-9 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 M634_21040 a417583ee8fc59d8cfb8a38d6edd3b59 785 SUPERFAMILY SSF47384 253 335 2.55E-19 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M634_21040 a417583ee8fc59d8cfb8a38d6edd3b59 785 Pfam PF00072 Response regulator receiver domain 517 627 5.5E-17 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_21040 a417583ee8fc59d8cfb8a38d6edd3b59 785 Pfam PF01627 Hpt domain 690 761 4.1E-6 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 M634_21040 a417583ee8fc59d8cfb8a38d6edd3b59 785 Gene3D G3DSA:1.10.287.130 238 332 1.4E-25 T 12-10-2018 M634_21040 a417583ee8fc59d8cfb8a38d6edd3b59 785 SMART SM00388 269 334 2.9E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_21040 a417583ee8fc59d8cfb8a38d6edd3b59 785 SMART SM00387 381 494 9.7E-37 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_21040 a417583ee8fc59d8cfb8a38d6edd3b59 785 Pfam PF00512 His Kinase A (phospho-acceptor) domain 269 333 2.2E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_21040 a417583ee8fc59d8cfb8a38d6edd3b59 785 SUPERFAMILY SSF55874 323 498 5.63E-48 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_21040 a417583ee8fc59d8cfb8a38d6edd3b59 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 447 2.3E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_21040 a417583ee8fc59d8cfb8a38d6edd3b59 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 472 2.3E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_21040 a417583ee8fc59d8cfb8a38d6edd3b59 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 433 2.3E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_21040 a417583ee8fc59d8cfb8a38d6edd3b59 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 491 2.3E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_21040 a417583ee8fc59d8cfb8a38d6edd3b59 785 SUPERFAMILY SSF47226 611 759 6.8E-13 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 M634_02925 5f1cbd9f27ce90d16adbe05d14b2ec63 196 SUPERFAMILY SSF48498 81 191 3.2E-11 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily M634_02925 5f1cbd9f27ce90d16adbe05d14b2ec63 196 SUPERFAMILY SSF46689 5 78 1.99E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_02925 5f1cbd9f27ce90d16adbe05d14b2ec63 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 58 3.0E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M634_02925 5f1cbd9f27ce90d16adbe05d14b2ec63 196 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 196 41.226 T 12-10-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 M634_02925 5f1cbd9f27ce90d16adbe05d14b2ec63 196 Gene3D G3DSA:1.10.357.10 3 196 2.9E-77 T 12-10-2018 M634_02790 c6813b1b0eaf216ef148e5dcdb695928 693 Pfam PF00270 DEAD/DEAH box helicase 271 433 7.9E-19 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 M634_02790 c6813b1b0eaf216ef148e5dcdb695928 693 SUPERFAMILY SSF50249 9 174 3.08E-41 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_02790 c6813b1b0eaf216ef148e5dcdb695928 693 SMART SM00487 265 459 3.3E-30 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M634_02790 c6813b1b0eaf216ef148e5dcdb695928 693 Pfam PF00271 Helicase conserved C-terminal domain 480 588 6.2E-17 T 12-10-2018 IPR001650 Helicase, C-terminal M634_02790 c6813b1b0eaf216ef148e5dcdb695928 693 Gene3D G3DSA:3.40.50.300 457 630 2.0E-52 T 12-10-2018 M634_02790 c6813b1b0eaf216ef148e5dcdb695928 693 Gene3D G3DSA:3.40.50.300 208 450 3.4E-83 T 12-10-2018 M634_02790 c6813b1b0eaf216ef148e5dcdb695928 693 SUPERFAMILY SSF52540 292 653 4.99E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_02790 c6813b1b0eaf216ef148e5dcdb695928 693 Pfam PF17191 RecG wedge domain 14 172 2.2E-21 T 12-10-2018 IPR033454 RecG, wedge domain M634_02790 c6813b1b0eaf216ef148e5dcdb695928 693 SUPERFAMILY SSF52540 200 453 1.35E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_02790 c6813b1b0eaf216ef148e5dcdb695928 693 Gene3D G3DSA:1.10.150.20 3 41 5.5E-5 T 12-10-2018 M634_02790 c6813b1b0eaf216ef148e5dcdb695928 693 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 29 664 2.3E-238 T 12-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 M634_02790 c6813b1b0eaf216ef148e5dcdb695928 693 Gene3D G3DSA:2.40.50.140 47 141 2.0E-13 T 12-10-2018 M634_02790 c6813b1b0eaf216ef148e5dcdb695928 693 SMART SM00490 505 589 1.7E-21 T 12-10-2018 IPR001650 Helicase, C-terminal M634_19180 4ca0e7ef35ad0d93495f5e1cbb71e1fb 451 SMART SM00267 283 450 2.9E-47 T 12-10-2018 IPR000160 GGDEF domain M634_19180 4ca0e7ef35ad0d93495f5e1cbb71e1fb 451 Pfam PF03924 CHASE domain 109 211 2.6E-14 T 12-10-2018 IPR006189 CHASE domain M634_19180 4ca0e7ef35ad0d93495f5e1cbb71e1fb 451 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 293 450 1.9E-47 T 12-10-2018 IPR000160 GGDEF domain M634_19180 4ca0e7ef35ad0d93495f5e1cbb71e1fb 451 Gene3D G3DSA:3.30.70.270 290 451 1.4E-50 T 12-10-2018 M634_19180 4ca0e7ef35ad0d93495f5e1cbb71e1fb 451 SMART SM01079 47 223 1.2E-26 T 12-10-2018 IPR006189 CHASE domain M634_19180 4ca0e7ef35ad0d93495f5e1cbb71e1fb 451 SUPERFAMILY SSF55073 299 451 1.65E-43 T 12-10-2018 IPR029787 Nucleotide cyclase M634_19180 4ca0e7ef35ad0d93495f5e1cbb71e1fb 451 Pfam PF00990 Diguanylate cyclase, GGDEF domain 294 451 1.1E-43 T 12-10-2018 IPR000160 GGDEF domain M634_20640 7898fe83dcd92c6b1e4b9805081f9080 392 SUPERFAMILY SSF103473 4 381 3.01E-43 T 12-10-2018 IPR036259 MFS transporter superfamily M634_20640 7898fe83dcd92c6b1e4b9805081f9080 392 Pfam PF07690 Major Facilitator Superfamily 254 381 1.7E-13 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M634_20640 7898fe83dcd92c6b1e4b9805081f9080 392 Pfam PF07690 Major Facilitator Superfamily 11 241 3.2E-18 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M634_20640 7898fe83dcd92c6b1e4b9805081f9080 392 Gene3D G3DSA:1.20.1250.20 2 385 3.1E-40 T 12-10-2018 M634_11475 0c15807b4606fd8aca2dedc96cd0804d 111 Gene3D G3DSA:3.30.2310.20 1 103 6.2E-5 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily M634_11475 0c15807b4606fd8aca2dedc96cd0804d 111 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 98 1.9E-7 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family M634_17395 9c9f27175f13b6897e39fa846b8f1522 385 SMART SM00936 275 365 6.4E-28 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M634_17395 9c9f27175f13b6897e39fa846b8f1522 385 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 275 365 2.2E-22 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M634_17395 9c9f27175f13b6897e39fa846b8f1522 385 SUPERFAMILY SSF69189 275 367 2.55E-23 T 12-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M634_17395 9c9f27175f13b6897e39fa846b8f1522 385 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 24 254 1.5E-85 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 M634_17395 9c9f27175f13b6897e39fa846b8f1522 385 Gene3D G3DSA:2.60.410.10 275 365 3.7E-27 T 12-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M634_17395 9c9f27175f13b6897e39fa846b8f1522 385 SUPERFAMILY SSF56601 1 275 8.25E-83 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like M634_17395 9c9f27175f13b6897e39fa846b8f1522 385 Gene3D G3DSA:3.40.710.10 18 273 6.5E-89 T 12-10-2018 M634_17395 9c9f27175f13b6897e39fa846b8f1522 385 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 58 69 7.3E-19 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 M634_17395 9c9f27175f13b6897e39fa846b8f1522 385 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 141 154 7.3E-19 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 M634_17395 9c9f27175f13b6897e39fa846b8f1522 385 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 114 131 7.3E-19 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 M634_19340 6792d0b672ca02d64fb89cc927b62628 271 Gene3D G3DSA:3.40.50.1000 8 271 1.8E-97 T 12-10-2018 IPR023214 HAD superfamily M634_19340 6792d0b672ca02d64fb89cc927b62628 271 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 73 205 5.9E-14 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M634_19340 6792d0b672ca02d64fb89cc927b62628 271 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 205 4.9E-9 T 12-10-2018 M634_19340 6792d0b672ca02d64fb89cc927b62628 271 SUPERFAMILY SSF56784 6 258 9.05E-53 T 12-10-2018 IPR036412 HAD-like superfamily M634_19340 6792d0b672ca02d64fb89cc927b62628 271 Hamap MF_01375 Phosphonoacetaldehyde hydrolase [phnX]. 1 271 142.094 T 12-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 M634_19340 6792d0b672ca02d64fb89cc927b62628 271 Gene3D G3DSA:1.10.150.240 24 102 1.8E-97 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 M634_19340 6792d0b672ca02d64fb89cc927b62628 271 TIGRFAM TIGR01422 phosphonatase: phosphonoacetaldehyde hydrolase 6 258 1.0E-117 T 12-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 M634_11920 40ed9ec10e1b5334a72a78e1ff4b5e7b 958 SUPERFAMILY SSF53383 506 951 6.71E-112 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_11920 40ed9ec10e1b5334a72a78e1ff4b5e7b 958 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 532 892 2.6E-60 T 12-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 M634_11920 40ed9ec10e1b5334a72a78e1ff4b5e7b 958 Gene3D G3DSA:3.40.640.10 87 355 2.6E-131 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_11920 40ed9ec10e1b5334a72a78e1ff4b5e7b 958 Gene3D G3DSA:1.20.1650.10 463 560 3.5E-47 T 12-10-2018 M634_11920 40ed9ec10e1b5334a72a78e1ff4b5e7b 958 SUPERFAMILY SSF53383 42 464 1.07E-112 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_11920 40ed9ec10e1b5334a72a78e1ff4b5e7b 958 Gene3D G3DSA:3.90.1150.10 38 462 2.6E-131 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M634_11920 40ed9ec10e1b5334a72a78e1ff4b5e7b 958 Pfam PF00202 Aminotransferase class-III 51 464 9.0E-94 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M634_11920 40ed9ec10e1b5334a72a78e1ff4b5e7b 958 Gene3D G3DSA:3.40.640.10 575 843 7.0E-144 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_11920 40ed9ec10e1b5334a72a78e1ff4b5e7b 958 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 34 466 4.5E-160 T 12-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 M634_11920 40ed9ec10e1b5334a72a78e1ff4b5e7b 958 Gene3D G3DSA:3.90.1150.10 561 948 7.0E-144 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M634_07105 5e063ec33f3a6e9cbe8f653e29639933 88 Pfam PF10692 Protein of unknown function (DUF2498) 10 86 4.6E-42 T 12-10-2018 IPR019633 Protein of unknown function DUF2498 M634_07105 5e063ec33f3a6e9cbe8f653e29639933 88 Gene3D G3DSA:1.10.1900.30 14 82 5.0E-36 T 12-10-2018 IPR038191 YciN superfamily M634_03095 08e939d468bb5bd45d3d7c7e3736b86c 890 Pfam PF10531 SLBB domain 198 246 3.9E-8 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M634_03095 08e939d468bb5bd45d3d7c7e3736b86c 890 Pfam PF10531 SLBB domain 558 602 7.6E-8 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M634_03095 08e939d468bb5bd45d3d7c7e3736b86c 890 Pfam PF10531 SLBB domain 281 324 9.6E-11 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M634_03095 08e939d468bb5bd45d3d7c7e3736b86c 890 Gene3D G3DSA:3.10.560.10 783 861 4.1E-11 T 12-10-2018 M634_03095 08e939d468bb5bd45d3d7c7e3736b86c 890 Gene3D G3DSA:3.10.560.10 190 276 2.4E-18 T 12-10-2018 M634_03095 08e939d468bb5bd45d3d7c7e3736b86c 890 Gene3D G3DSA:3.10.560.10 358 450 1.1E-7 T 12-10-2018 M634_03095 08e939d468bb5bd45d3d7c7e3736b86c 890 Gene3D G3DSA:3.10.560.10 543 642 1.6E-12 T 12-10-2018 M634_03095 08e939d468bb5bd45d3d7c7e3736b86c 890 Gene3D G3DSA:3.10.560.10 277 357 9.9E-14 T 12-10-2018 M634_03095 08e939d468bb5bd45d3d7c7e3736b86c 890 Pfam PF06251 Capsule biosynthesis GfcC 662 863 2.6E-11 T 12-10-2018 IPR010425 Domain of unknown function DUF1017 M634_03095 08e939d468bb5bd45d3d7c7e3736b86c 890 SUPERFAMILY SSF142984 652 688 9.42E-5 T 12-10-2018 M634_03095 08e939d468bb5bd45d3d7c7e3736b86c 890 Pfam PF02563 Polysaccharide biosynthesis/export protein 117 179 2.0E-13 T 12-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 M634_03095 08e939d468bb5bd45d3d7c7e3736b86c 890 Gene3D G3DSA:3.30.1950.10 123 189 2.2E-5 T 12-10-2018 M634_21895 44e6816d57f876559f9a9ac01c3fc605 334 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 176 2.8E-30 T 12-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase M634_11250 588928456928f5c0cc172f4f6e2c50a5 458 Pfam PF04317 YcjX-like family, DUF463 20 457 2.3E-189 T 12-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein M634_11250 588928456928f5c0cc172f4f6e2c50a5 458 PIRSF PIRSF019381 1 458 2.4E-202 T 12-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein M634_01120 96118cd06073aeecf8d5ce715d47f0b7 126 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 72 100 - T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 M634_01120 96118cd06073aeecf8d5ce715d47f0b7 126 Hamap MF_00422 Protein translocase subunit SecE [secE]. 67 122 13.517 T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 M634_01120 96118cd06073aeecf8d5ce715d47f0b7 126 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 70 122 9.6E-18 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 M634_01120 96118cd06073aeecf8d5ce715d47f0b7 126 Gene3D G3DSA:1.20.5.1030 67 123 1.2E-17 T 12-10-2018 IPR038379 SecE superfamily M634_01120 96118cd06073aeecf8d5ce715d47f0b7 126 PRINTS PR01650 Bacterial translocase SecE signature 66 86 2.9E-41 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 M634_01120 96118cd06073aeecf8d5ce715d47f0b7 126 PRINTS PR01650 Bacterial translocase SecE signature 90 110 2.9E-41 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 M634_01120 96118cd06073aeecf8d5ce715d47f0b7 126 PRINTS PR01650 Bacterial translocase SecE signature 45 66 2.9E-41 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 M634_01120 96118cd06073aeecf8d5ce715d47f0b7 126 PRINTS PR01650 Bacterial translocase SecE signature 110 126 2.9E-41 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 M634_01120 96118cd06073aeecf8d5ce715d47f0b7 126 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 71 121 5.6E-21 T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 M634_01745 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 389 2.3E-142 T 12-10-2018 IPR002155 Thiolase GO:0016747 M634_01745 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 ProSitePatterns PS00737 Thiolases signature 2. 337 353 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 M634_01745 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 M634_01745 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 SUPERFAMILY SSF53901 266 390 3.3E-44 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M634_01745 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 SUPERFAMILY SSF53901 4 263 7.81E-79 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M634_01745 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 Gene3D G3DSA:3.40.47.10 138 385 6.2E-151 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M634_01745 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 91 109 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 M634_01745 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 PIRSF PIRSF000429 2 391 1.1E-133 T 12-10-2018 IPR002155 Thiolase GO:0016747 M634_01745 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 5 391 60.678 T 12-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 M634_01745 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 Gene3D G3DSA:3.40.47.10 8 271 6.2E-151 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M634_01745 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 Pfam PF02803 Thiolase, C-terminal domain 266 390 1.4E-49 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 M634_01745 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 7 391 1.0E-243 T 12-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 M634_01745 bdb65ef6c4666ea0b02f9e02b1c99e1f 391 Pfam PF00108 Thiolase, N-terminal domain 8 258 1.7E-83 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 M634_11030 a23d207e30b1ab02dc26475572ce25d3 218 Gene3D G3DSA:3.40.50.150 1 217 2.7E-53 T 12-10-2018 M634_11030 a23d207e30b1ab02dc26475572ce25d3 218 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 23 29 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 M634_11030 a23d207e30b1ab02dc26475572ce25d3 218 Pfam PF01555 DNA methylase 20 137 2.0E-17 T 12-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 M634_11030 a23d207e30b1ab02dc26475572ce25d3 218 Pfam PF01555 DNA methylase 153 210 5.0E-20 T 12-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 M634_11030 a23d207e30b1ab02dc26475572ce25d3 218 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 19 33 2.5E-23 T 12-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 M634_11030 a23d207e30b1ab02dc26475572ce25d3 218 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 197 217 2.5E-23 T 12-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 M634_11030 a23d207e30b1ab02dc26475572ce25d3 218 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 174 192 2.5E-23 T 12-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 M634_11030 a23d207e30b1ab02dc26475572ce25d3 218 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 155 172 2.5E-23 T 12-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 M634_11030 a23d207e30b1ab02dc26475572ce25d3 218 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 66 86 2.5E-23 T 12-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 M634_11030 a23d207e30b1ab02dc26475572ce25d3 218 SUPERFAMILY SSF53335 3 217 1.68E-49 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_01955 a053f3d67b683cd49187349256c24607 401 SUPERFAMILY SSF103473 5 378 3.14E-51 T 12-10-2018 IPR036259 MFS transporter superfamily M634_01955 a053f3d67b683cd49187349256c24607 401 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 4 368 2.5E-82 T 12-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 M634_01955 a053f3d67b683cd49187349256c24607 401 Gene3D G3DSA:1.20.1720.10 8 377 1.2E-71 T 12-10-2018 M634_01955 a053f3d67b683cd49187349256c24607 401 Pfam PF07690 Major Facilitator Superfamily 13 347 1.8E-34 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M634_10340 30b4b9c91685990936010cc671f0d396 213 SUPERFAMILY SSF55186 84 210 1.44E-26 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 M634_10340 30b4b9c91685990936010cc671f0d396 213 Gene3D G3DSA:3.30.980.10 84 212 1.7E-29 T 12-10-2018 M634_10340 30b4b9c91685990936010cc671f0d396 213 Gene3D G3DSA:2.40.30.130 1 83 1.4E-17 T 12-10-2018 M634_10340 30b4b9c91685990936010cc671f0d396 213 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 178 208 5.9E-6 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 M634_10340 30b4b9c91685990936010cc671f0d396 213 SMART SM00863 166 208 5.3E-7 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 M634_10340 30b4b9c91685990936010cc671f0d396 213 SUPERFAMILY SSF50447 1 83 2.93E-16 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily M634_10340 30b4b9c91685990936010cc671f0d396 213 Pfam PF01411 tRNA synthetases class II (A) 11 87 1.5E-9 T 12-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 M634_18315 98ec5b26b4464318e36fbb7b89028a0f 212 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 117 145 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 M634_18315 98ec5b26b4464318e36fbb7b89028a0f 212 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 108 143 1.7E-11 T 12-10-2018 IPR001451 Hexapeptide repeat M634_18315 98ec5b26b4464318e36fbb7b89028a0f 212 SUPERFAMILY SSF51161 50 200 1.04E-41 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily M634_18315 98ec5b26b4464318e36fbb7b89028a0f 212 Gene3D G3DSA:2.160.10.10 1 208 1.5E-59 T 12-10-2018 M634_13490 e2c7927788d79ab467fe7650ac30dbc6 658 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 639 6.1E-127 T 12-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal M634_13490 e2c7927788d79ab467fe7650ac30dbc6 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 2.5E-95 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 M634_13490 e2c7927788d79ab467fe7650ac30dbc6 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 2.5E-95 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 M634_13490 e2c7927788d79ab467fe7650ac30dbc6 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 2.5E-95 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 M634_13490 e2c7927788d79ab467fe7650ac30dbc6 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 2.5E-95 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 M634_13490 e2c7927788d79ab467fe7650ac30dbc6 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 2.5E-95 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 M634_13490 e2c7927788d79ab467fe7650ac30dbc6 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 2.5E-95 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 M634_13490 e2c7927788d79ab467fe7650ac30dbc6 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 2.5E-95 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 M634_13490 e2c7927788d79ab467fe7650ac30dbc6 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 2.5E-95 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 M634_13490 e2c7927788d79ab467fe7650ac30dbc6 658 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 642 1.1E-257 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 M634_13490 e2c7927788d79ab467fe7650ac30dbc6 658 Pfam PF01578 Cytochrome C assembly protein 89 297 4.1E-54 T 12-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 M634_13490 e2c7927788d79ab467fe7650ac30dbc6 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 1.1E-62 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 M634_13490 e2c7927788d79ab467fe7650ac30dbc6 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 1.1E-62 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 M634_13490 e2c7927788d79ab467fe7650ac30dbc6 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 1.1E-62 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 M634_13490 e2c7927788d79ab467fe7650ac30dbc6 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 632 645 1.1E-62 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 M634_13490 e2c7927788d79ab467fe7650ac30dbc6 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 1.1E-62 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 M634_13490 e2c7927788d79ab467fe7650ac30dbc6 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 1.1E-62 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 M634_13490 e2c7927788d79ab467fe7650ac30dbc6 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 1.1E-62 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 M634_24105 64fec70ab07c5badb6420ea2b3e1074c 1422 Gene3D G3DSA:3.30.70.20 619 717 2.4E-16 T 12-10-2018 M634_24105 64fec70ab07c5badb6420ea2b3e1074c 1422 Gene3D G3DSA:3.40.228.10 864 1065 1.7E-178 T 12-10-2018 M634_24105 64fec70ab07c5badb6420ea2b3e1074c 1422 Gene3D G3DSA:3.50.50.60 308 406 1.5E-20 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_24105 64fec70ab07c5badb6420ea2b3e1074c 1422 Pfam PF01568 Molydopterin dinucleotide binding domain 1295 1399 3.3E-29 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 M634_24105 64fec70ab07c5badb6420ea2b3e1074c 1422 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 729 782 2.1E-16 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M634_24105 64fec70ab07c5badb6420ea2b3e1074c 1422 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 1158 1175 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 M634_24105 64fec70ab07c5badb6420ea2b3e1074c 1422 Gene3D G3DSA:2.40.40.20 1285 1405 2.2E-40 T 12-10-2018 M634_24105 64fec70ab07c5badb6420ea2b3e1074c 1422 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 699 710 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M634_24105 64fec70ab07c5badb6420ea2b3e1074c 1422 Pfam PF00384 Molybdopterin oxidoreductase 786 1212 4.7E-90 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M634_24105 64fec70ab07c5badb6420ea2b3e1074c 1422 SUPERFAMILY SSF53706 724 1261 4.19E-205 T 12-10-2018 M634_24105 64fec70ab07c5badb6420ea2b3e1074c 1422 Pfam PF00037 4Fe-4S binding domain 697 714 2.4E-5 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M634_24105 64fec70ab07c5badb6420ea2b3e1074c 1422 Pfam PF00037 4Fe-4S binding domain 633 654 1.3E-4 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M634_24105 64fec70ab07c5badb6420ea2b3e1074c 1422 SUPERFAMILY SSF54292 1 98 7.87E-25 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 M634_24105 64fec70ab07c5badb6420ea2b3e1074c 1422 Gene3D G3DSA:3.50.50.60 191 307 3.5E-34 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_24105 64fec70ab07c5badb6420ea2b3e1074c 1422 Gene3D G3DSA:3.40.50.740 791 1253 1.7E-178 T 12-10-2018 M634_24105 64fec70ab07c5badb6420ea2b3e1074c 1422 Gene3D G3DSA:2.20.25.90 728 783 4.5E-20 T 12-10-2018 M634_24105 64fec70ab07c5badb6420ea2b3e1074c 1422 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 733 1403 1.5E-248 T 12-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 M634_24105 64fec70ab07c5badb6420ea2b3e1074c 1422 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 96 175 2.8E-18 T 12-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 M634_24105 64fec70ab07c5badb6420ea2b3e1074c 1422 SUPERFAMILY SSF46548 88 200 1.26E-17 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 M634_24105 64fec70ab07c5badb6420ea2b3e1074c 1422 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 733 750 - T 12-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 M634_24105 64fec70ab07c5badb6420ea2b3e1074c 1422 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 75 3.9E-9 T 12-10-2018 M634_24105 64fec70ab07c5badb6420ea2b3e1074c 1422 SUPERFAMILY SSF54862 567 718 1.21E-18 T 12-10-2018 M634_24105 64fec70ab07c5badb6420ea2b3e1074c 1422 Gene3D G3DSA:3.50.50.60 413 503 2.6E-6 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_24105 64fec70ab07c5badb6420ea2b3e1074c 1422 Gene3D G3DSA:1.10.1060.10 58 190 3.7E-25 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 M634_24105 64fec70ab07c5badb6420ea2b3e1074c 1422 SUPERFAMILY SSF50692 1263 1404 5.65E-40 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily M634_24105 64fec70ab07c5badb6420ea2b3e1074c 1422 PRINTS PR00419 Adrenodoxin reductase family signature 192 214 6.5E-15 T 12-10-2018 M634_24105 64fec70ab07c5badb6420ea2b3e1074c 1422 PRINTS PR00419 Adrenodoxin reductase family signature 215 228 6.5E-15 T 12-10-2018 M634_24105 64fec70ab07c5badb6420ea2b3e1074c 1422 PRINTS PR00419 Adrenodoxin reductase family signature 323 337 6.5E-15 T 12-10-2018 M634_24105 64fec70ab07c5badb6420ea2b3e1074c 1422 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 192 488 6.4E-33 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 M634_24105 64fec70ab07c5badb6420ea2b3e1074c 1422 SMART SM00926 728 783 2.7E-18 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M634_24105 64fec70ab07c5badb6420ea2b3e1074c 1422 SUPERFAMILY SSF51971 190 430 2.88E-63 T 12-10-2018 M634_22205 a55df5026e47e9ce20163d6240789452 189 Hamap MF_00780 Protein YceI [yceI]. 1 189 44.642 T 12-10-2018 IPR023480 Uncharacterised protein family UPF0312/YceI M634_22205 a55df5026e47e9ce20163d6240789452 189 SMART SM00867 24 187 3.1E-63 T 12-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like M634_22205 a55df5026e47e9ce20163d6240789452 189 SUPERFAMILY SSF101874 23 188 7.72E-50 T 12-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily M634_22205 a55df5026e47e9ce20163d6240789452 189 Pfam PF04264 YceI-like domain 25 183 2.1E-36 T 12-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like M634_22205 a55df5026e47e9ce20163d6240789452 189 Gene3D G3DSA:2.40.128.110 23 189 8.7E-50 T 12-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily M634_00395 b3dd2d9a62014cc6d3b308f343ab759e 66 Pfam PF09526 Probable metal-binding protein (DUF2387) 4 52 5.5E-21 T 12-10-2018 IPR012658 Conserved hypothetical protein CHP02443 M634_00395 b3dd2d9a62014cc6d3b308f343ab759e 66 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 2 60 4.4E-33 T 12-10-2018 IPR012658 Conserved hypothetical protein CHP02443 M634_14550 8c30602a3d51b32f609872e9e1d302da 442 PIRSF PIRSF000478 1 438 1.0E-148 T 12-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 M634_14550 8c30602a3d51b32f609872e9e1d302da 442 SUPERFAMILY SSF54680 337 437 2.35E-28 T 12-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 M634_14550 8c30602a3d51b32f609872e9e1d302da 442 Pfam PF00591 Glycosyl transferase family, a/b domain 80 309 1.0E-48 T 12-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 M634_14550 8c30602a3d51b32f609872e9e1d302da 442 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 12-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 M634_14550 8c30602a3d51b32f609872e9e1d302da 442 Gene3D G3DSA:3.90.1170.30 340 432 6.6E-29 T 12-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 M634_14550 8c30602a3d51b32f609872e9e1d302da 442 Gene3D G3DSA:1.20.970.10 4 67 4.1E-25 T 12-10-2018 M634_14550 8c30602a3d51b32f609872e9e1d302da 442 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 3.5E-21 T 12-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 M634_14550 8c30602a3d51b32f609872e9e1d302da 442 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 3 427 1.1E-213 T 12-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 M634_14550 8c30602a3d51b32f609872e9e1d302da 442 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 350 423 3.7E-23 T 12-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 M634_14550 8c30602a3d51b32f609872e9e1d302da 442 Gene3D G3DSA:3.40.1030.10 70 339 2.9E-100 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 M634_14550 8c30602a3d51b32f609872e9e1d302da 442 Hamap MF_01628 Thymidine phosphorylase [deoA]. 2 437 45.373 T 12-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 M634_14550 8c30602a3d51b32f609872e9e1d302da 442 SUPERFAMILY SSF47648 2 70 1.14E-21 T 12-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 M634_14550 8c30602a3d51b32f609872e9e1d302da 442 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 1.7E-159 T 12-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 M634_14550 8c30602a3d51b32f609872e9e1d302da 442 SMART SM00941 350 424 4.6E-27 T 12-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 M634_14550 8c30602a3d51b32f609872e9e1d302da 442 SUPERFAMILY SSF52418 73 334 1.57E-88 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 M634_05145 88f77c144bfda689444925dc6a47057e 147 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 6.9E-31 T 12-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 M634_05145 88f77c144bfda689444925dc6a47057e 147 SUPERFAMILY SSF55961 1 143 6.14E-34 T 12-10-2018 M634_05145 88f77c144bfda689444925dc6a47057e 147 Gene3D G3DSA:3.30.530.20 1 143 3.0E-37 T 12-10-2018 IPR023393 START-like domain superfamily M634_08000 02eb631ff3c318a1b3b711dd951f8f5d 660 Pfam PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB 58 660 5.1E-165 T 12-10-2018 IPR020016 Decahaem-associated outer membrane protein, MtrB/PioB M634_08000 02eb631ff3c318a1b3b711dd951f8f5d 660 SUPERFAMILY SSF56935 320 477 6.23E-5 T 12-10-2018 M634_08000 02eb631ff3c318a1b3b711dd951f8f5d 660 TIGRFAM TIGR03509 OMP_MtrB_PioB: decaheme-associated outer membrane protein, MtrB/PioB family 49 660 1.8E-206 T 12-10-2018 IPR020016 Decahaem-associated outer membrane protein, MtrB/PioB M634_08000 02eb631ff3c318a1b3b711dd951f8f5d 660 SUPERFAMILY SSF56935 426 634 3.89E-9 T 12-10-2018 M634_01910 82e9e9accf0408f8b54babd4f81fdf07 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 13.623 T 12-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 M634_01910 82e9e9accf0408f8b54babd4f81fdf07 156 SUPERFAMILY SSF81573 63 121 6.67E-15 T 12-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily M634_01910 82e9e9accf0408f8b54babd4f81fdf07 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 2.9E-60 T 12-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 M634_01910 82e9e9accf0408f8b54babd4f81fdf07 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 7.3E-37 T 12-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 M634_01910 82e9e9accf0408f8b54babd4f81fdf07 156 Gene3D G3DSA:1.20.5.620 62 122 1.2E-23 T 12-10-2018 M634_15250 2ed4f879c3d44cf7b5efce869c7cbc62 739 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 64 737 2.9E-182 T 12-10-2018 IPR004811 RelA/SpoT family GO:0015969 M634_15250 2ed4f879c3d44cf7b5efce869c7cbc62 739 SUPERFAMILY SSF109604 50 205 5.96E-42 T 12-10-2018 M634_15250 2ed4f879c3d44cf7b5efce869c7cbc62 739 SMART SM00954 250 360 8.3E-64 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 M634_15250 2ed4f879c3d44cf7b5efce869c7cbc62 739 Gene3D G3DSA:3.30.70.260 660 739 8.1E-16 T 12-10-2018 M634_15250 2ed4f879c3d44cf7b5efce869c7cbc62 739 Pfam PF02824 TGS domain 402 461 1.6E-20 T 12-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 M634_15250 2ed4f879c3d44cf7b5efce869c7cbc62 739 Gene3D G3DSA:1.10.3210.10 49 205 4.5E-35 T 12-10-2018 M634_15250 2ed4f879c3d44cf7b5efce869c7cbc62 739 Pfam PF04607 Region found in RelA / SpoT proteins 250 359 2.7E-36 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 M634_15250 2ed4f879c3d44cf7b5efce869c7cbc62 739 SUPERFAMILY SSF55021 662 737 3.57E-10 T 12-10-2018 M634_15250 2ed4f879c3d44cf7b5efce869c7cbc62 739 Gene3D G3DSA:3.30.460.10 208 340 4.0E-49 T 12-10-2018 M634_15250 2ed4f879c3d44cf7b5efce869c7cbc62 739 Gene3D G3DSA:3.10.20.30 396 469 1.8E-30 T 12-10-2018 IPR012675 Beta-grasp domain superfamily M634_15250 2ed4f879c3d44cf7b5efce869c7cbc62 739 Pfam PF13328 HD domain 52 190 1.9E-35 T 12-10-2018 IPR003607 HD/PDEase domain M634_15250 2ed4f879c3d44cf7b5efce869c7cbc62 739 SUPERFAMILY SSF81271 395 461 9.81E-21 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 M634_15250 2ed4f879c3d44cf7b5efce869c7cbc62 739 Pfam PF13291 ACT domain 661 737 2.8E-16 T 12-10-2018 IPR002912 ACT domain M634_15250 2ed4f879c3d44cf7b5efce869c7cbc62 739 SUPERFAMILY SSF81301 195 406 2.45E-62 T 12-10-2018 M634_18385 4e64996bbe8de6af09964316d2bd13e9 455 Pfam PF12833 Helix-turn-helix domain 112 191 5.8E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_18385 4e64996bbe8de6af09964316d2bd13e9 455 SUPERFAMILY SSF46689 92 139 6.16E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_18385 4e64996bbe8de6af09964316d2bd13e9 455 SUPERFAMILY SSF57884 7 91 1.57E-34 T 12-10-2018 IPR035451 Ada-like domain superfamily M634_18385 4e64996bbe8de6af09964316d2bd13e9 455 Pfam PF02805 Metal binding domain of Ada 14 77 8.6E-30 T 12-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 M634_18385 4e64996bbe8de6af09964316d2bd13e9 455 Gene3D G3DSA:1.10.1670.10 415 455 6.0E-6 T 12-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 M634_18385 4e64996bbe8de6af09964316d2bd13e9 455 SUPERFAMILY SSF55945 201 293 8.95E-25 T 12-10-2018 M634_18385 4e64996bbe8de6af09964316d2bd13e9 455 SMART SM00342 106 189 4.9E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_18385 4e64996bbe8de6af09964316d2bd13e9 455 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 143 185 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 M634_18385 4e64996bbe8de6af09964316d2bd13e9 455 Pfam PF06029 AlkA N-terminal domain 201 312 3.1E-32 T 12-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal M634_18385 4e64996bbe8de6af09964316d2bd13e9 455 Gene3D G3DSA:1.10.340.30 313 413 2.1E-18 T 12-10-2018 M634_18385 4e64996bbe8de6af09964316d2bd13e9 455 Gene3D G3DSA:1.10.10.60 86 194 3.1E-25 T 12-10-2018 M634_18385 4e64996bbe8de6af09964316d2bd13e9 455 Gene3D G3DSA:3.30.310.20 200 312 4.7E-24 T 12-10-2018 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily M634_18385 4e64996bbe8de6af09964316d2bd13e9 455 Gene3D G3DSA:3.40.10.10 4 79 1.9E-29 T 12-10-2018 IPR035451 Ada-like domain superfamily M634_18385 4e64996bbe8de6af09964316d2bd13e9 455 SMART SM01009 200 312 8.3E-32 T 12-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal M634_18385 4e64996bbe8de6af09964316d2bd13e9 455 SUPERFAMILY SSF48150 303 452 1.29E-29 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 M634_18385 4e64996bbe8de6af09964316d2bd13e9 455 SUPERFAMILY SSF46689 144 192 5.21E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_16740 ab827754eb3973274d4a01ed9f8af5f5 334 Gene3D G3DSA:3.40.50.410 96 297 9.7E-60 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily M634_16740 ab827754eb3973274d4a01ed9f8af5f5 334 SMART SM00327 96 297 5.0E-19 T 12-10-2018 IPR002035 von Willebrand factor, type A M634_16740 ab827754eb3973274d4a01ed9f8af5f5 334 Pfam PF00092 von Willebrand factor type A domain 98 290 2.4E-32 T 12-10-2018 IPR002035 von Willebrand factor, type A M634_16740 ab827754eb3973274d4a01ed9f8af5f5 334 SUPERFAMILY SSF53300 94 293 2.23E-39 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily M634_16115 1b8e235c603ea740695af960938f7daf 450 SUPERFAMILY SSF55021 297 394 1.41E-20 T 12-10-2018 M634_16115 1b8e235c603ea740695af960938f7daf 450 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 6 449 4.1E-123 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 M634_16115 1b8e235c603ea740695af960938f7daf 450 SUPERFAMILY SSF55021 377 449 5.67E-16 T 12-10-2018 M634_16115 1b8e235c603ea740695af960938f7daf 450 Gene3D G3DSA:1.20.120.1320 42 135 2.6E-99 T 12-10-2018 M634_16115 1b8e235c603ea740695af960938f7daf 450 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 6 449 1.0E-123 T 12-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 M634_16115 1b8e235c603ea740695af960938f7daf 450 PIRSF PIRSF000726 2 450 4.6E-131 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 M634_16115 1b8e235c603ea740695af960938f7daf 450 Gene3D G3DSA:3.30.70.260 310 383 2.4E-48 T 12-10-2018 M634_16115 1b8e235c603ea740695af960938f7daf 450 Pfam PF00696 Amino acid kinase family 6 278 2.8E-48 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 M634_16115 1b8e235c603ea740695af960938f7daf 450 ProSitePatterns PS00324 Aspartokinase signature. 6 14 - T 12-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 M634_16115 1b8e235c603ea740695af960938f7daf 450 SUPERFAMILY SSF53633 6 293 1.31E-77 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily M634_16115 1b8e235c603ea740695af960938f7daf 450 Gene3D G3DSA:3.40.1160.10 6 290 2.6E-99 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily M634_16115 1b8e235c603ea740695af960938f7daf 450 Gene3D G3DSA:3.30.70.260 304 447 2.4E-48 T 12-10-2018 M634_12230 820fff6fabcfb3de3e19f9c98f1261b3 703 SUPERFAMILY SSF52833 579 673 9.84E-13 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M634_12230 820fff6fabcfb3de3e19f9c98f1261b3 703 Pfam PF13899 Thioredoxin-like 587 673 4.9E-10 T 12-10-2018 M634_12230 820fff6fabcfb3de3e19f9c98f1261b3 703 Pfam PF11412 Disulphide bond corrector protein DsbC 58 164 1.2E-15 T 12-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain M634_12230 820fff6fabcfb3de3e19f9c98f1261b3 703 ProSitePatterns PS00194 Thioredoxin family active site. 606 624 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 M634_12230 820fff6fabcfb3de3e19f9c98f1261b3 703 Gene3D G3DSA:3.40.30.10 584 689 6.9E-8 T 12-10-2018 M634_04620 de550288eab19488723948192a6879a6 122 PIRSF PIRSF028141 1 120 1.3E-34 T 12-10-2018 IPR027021 Cyclic di-GMP binding protein, PA4608 type M634_04620 de550288eab19488723948192a6879a6 122 SUPERFAMILY SSF141371 1 120 1.16E-28 T 12-10-2018 M634_04620 de550288eab19488723948192a6879a6 122 Pfam PF07238 PilZ domain 3 100 6.2E-13 T 12-10-2018 IPR009875 PilZ domain GO:0035438 M634_04620 de550288eab19488723948192a6879a6 122 Gene3D G3DSA:2.40.10.220 1 120 3.5E-27 T 12-10-2018 M634_04210 04a5bdffe53e849532eb8fcb72e72d0d 420 Gene3D G3DSA:3.30.420.40 13 379 2.2E-111 T 12-10-2018 M634_04210 04a5bdffe53e849532eb8fcb72e72d0d 420 Gene3D G3DSA:3.90.640.10 235 300 2.2E-111 T 12-10-2018 M634_04210 04a5bdffe53e849532eb8fcb72e72d0d 420 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 420 29.254 T 12-10-2018 IPR020823 Cell division protein FtsA M634_04210 04a5bdffe53e849532eb8fcb72e72d0d 420 Gene3D G3DSA:3.30.420.40 197 359 2.2E-111 T 12-10-2018 M634_04210 04a5bdffe53e849532eb8fcb72e72d0d 420 Gene3D G3DSA:3.30.1490.110 87 169 2.2E-111 T 12-10-2018 M634_04210 04a5bdffe53e849532eb8fcb72e72d0d 420 SUPERFAMILY SSF53067 8 221 1.24E-59 T 12-10-2018 M634_04210 04a5bdffe53e849532eb8fcb72e72d0d 420 Pfam PF02491 SHS2 domain inserted in FTSA 85 161 2.5E-28 T 12-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 M634_04210 04a5bdffe53e849532eb8fcb72e72d0d 420 PIRSF PIRSF003101 1 420 3.2E-146 T 12-10-2018 IPR020823 Cell division protein FtsA M634_04210 04a5bdffe53e849532eb8fcb72e72d0d 420 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 1.1E-150 T 12-10-2018 IPR020823 Cell division protein FtsA M634_04210 04a5bdffe53e849532eb8fcb72e72d0d 420 SUPERFAMILY SSF53067 198 384 2.67E-45 T 12-10-2018 M634_04210 04a5bdffe53e849532eb8fcb72e72d0d 420 Pfam PF14450 Cell division protein FtsA 207 381 8.7E-24 T 12-10-2018 M634_04210 04a5bdffe53e849532eb8fcb72e72d0d 420 SMART SM00842 10 196 6.1E-95 T 12-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 M634_19795 5074a9c3a79f3eb98f68379e89ed7c07 340 Gene3D G3DSA:3.40.50.300 134 339 3.1E-74 T 12-10-2018 M634_19795 5074a9c3a79f3eb98f68379e89ed7c07 340 Gene3D G3DSA:3.40.50.720 57 133 3.2E-18 T 12-10-2018 M634_19795 5074a9c3a79f3eb98f68379e89ed7c07 340 PIRSF PIRSF026760 9 340 7.3E-107 T 12-10-2018 IPR011669 Uncharacterised conserved protein UCP026760 M634_19795 5074a9c3a79f3eb98f68379e89ed7c07 340 SUPERFAMILY SSF52540 3 339 3.32E-101 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_19795 5074a9c3a79f3eb98f68379e89ed7c07 340 Pfam PF17396 Domain of unknown function (DUF1611_N) Rossmann-like domain 53 130 4.6E-21 T 12-10-2018 IPR035402 Domain of unknown function DUF1611-N, Rossmann-like domain M634_19795 5074a9c3a79f3eb98f68379e89ed7c07 340 Pfam PF07755 Domain of unknown function (DUF1611_C) P-loop domain 137 333 9.8E-73 T 12-10-2018 IPR035086 Domain of unknown function DUF1611, P-loop M634_13325 57e0f055c3418d6accd866299e0dad1c 504 Gene3D G3DSA:3.60.20.10 2 411 8.5E-159 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal M634_13325 57e0f055c3418d6accd866299e0dad1c 504 PIRSF PIRSF000485 1 479 4.4E-169 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 M634_13325 57e0f055c3418d6accd866299e0dad1c 504 Gene3D G3DSA:3.40.50.2020 276 440 8.5E-159 T 12-10-2018 M634_13325 57e0f055c3418d6accd866299e0dad1c 504 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 463 1.0E-165 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 M634_13325 57e0f055c3418d6accd866299e0dad1c 504 Pfam PF13522 Glutamine amidotransferase domain 63 207 2.5E-17 T 12-10-2018 M634_13325 57e0f055c3418d6accd866299e0dad1c 504 SUPERFAMILY SSF53271 249 482 9.96E-70 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like M634_13325 57e0f055c3418d6accd866299e0dad1c 504 SUPERFAMILY SSF56235 2 256 5.49E-71 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal M634_13325 57e0f055c3418d6accd866299e0dad1c 504 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 463 45.067 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 M634_13325 57e0f055c3418d6accd866299e0dad1c 504 Pfam PF00156 Phosphoribosyl transferase domain 278 389 7.5E-7 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 M634_20990 89a167877b9ff07b16bee38127b160b1 312 Gene3D G3DSA:3.40.190.10 28 289 4.5E-95 T 12-10-2018 M634_20990 89a167877b9ff07b16bee38127b160b1 312 Gene3D G3DSA:3.40.190.100 109 218 4.5E-95 T 12-10-2018 M634_20990 89a167877b9ff07b16bee38127b160b1 312 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 27 279 3.8E-61 T 12-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 M634_20990 89a167877b9ff07b16bee38127b160b1 312 SUPERFAMILY SSF53850 20 296 3.57E-89 T 12-10-2018 M634_20990 89a167877b9ff07b16bee38127b160b1 312 TIGRFAM TIGR03414 ABC_choline_bnd: choline ABC transporter, periplasmic binding protein 22 306 9.8E-144 T 12-10-2018 IPR017783 Choline ABC transporter, substrate-binding protein GO:0015871|GO:0033265|GO:0042597 M634_08655 6f8461d688a28a1dd822130a85b8114a 345 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 88 339 1.3E-39 T 12-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 M634_08655 6f8461d688a28a1dd822130a85b8114a 345 SUPERFAMILY SSF56529 83 339 4.71E-55 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 M634_08655 6f8461d688a28a1dd822130a85b8114a 345 Gene3D G3DSA:3.90.850.10 1 345 2.1E-133 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 M634_10835 cad72dd4c52afe68220699a60eadc768 273 Pfam PF13391 HNH endonuclease 172 224 9.3E-9 T 12-10-2018 IPR003615 HNH nuclease M634_10835 cad72dd4c52afe68220699a60eadc768 273 Pfam PF09400 Protein of unknown function (DUF2002) 33 115 1.7E-5 T 12-10-2018 IPR018994 Protein of unknown function DUF2002 M634_10835 cad72dd4c52afe68220699a60eadc768 273 Gene3D G3DSA:3.90.1150.40 10 127 1.0E-5 T 12-10-2018 M634_10835 cad72dd4c52afe68220699a60eadc768 273 SUPERFAMILY SSF159894 34 116 4.18E-6 T 12-10-2018 M634_18705 7d8c7873c10ce0aad0f419e267293633 241 SUPERFAMILY SSF48317 24 224 6.02E-21 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily M634_18705 7d8c7873c10ce0aad0f419e267293633 241 SMART SM00014 77 225 1.4E-12 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase M634_18705 7d8c7873c10ce0aad0f419e267293633 241 Gene3D G3DSA:1.20.144.10 5 235 3.1E-47 T 12-10-2018 M634_18705 7d8c7873c10ce0aad0f419e267293633 241 Pfam PF01569 PAP2 superfamily 83 227 3.8E-18 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase M634_04435 01398a4ddb88bfdc48b8e1722528e2b8 262 Pfam PF13098 Thioredoxin-like domain 131 259 6.0E-25 T 12-10-2018 IPR012336 Thioredoxin-like fold M634_04435 01398a4ddb88bfdc48b8e1722528e2b8 262 Gene3D G3DSA:3.10.450.70 38 102 4.7E-18 T 12-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 M634_04435 01398a4ddb88bfdc48b8e1722528e2b8 262 SUPERFAMILY SSF54423 44 100 4.19E-14 T 12-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 M634_04435 01398a4ddb88bfdc48b8e1722528e2b8 262 Gene3D G3DSA:3.40.30.10 103 261 2.2E-44 T 12-10-2018 M634_04435 01398a4ddb88bfdc48b8e1722528e2b8 262 SUPERFAMILY SSF52833 122 261 1.02E-37 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M634_04435 01398a4ddb88bfdc48b8e1722528e2b8 262 Pfam PF10411 Disulfide bond isomerase protein N-terminus 49 99 1.0E-12 T 12-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal M634_01115 be626520ea85999f320d5624563e5a1f 182 Gene3D G3DSA:2.30.30.30 123 181 3.0E-25 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 M634_01115 be626520ea85999f320d5624563e5a1f 182 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 181 2.2E-70 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 M634_01115 be626520ea85999f320d5624563e5a1f 182 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 6.8E-22 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 M634_01115 be626520ea85999f320d5624563e5a1f 182 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 6.8E-22 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 M634_01115 be626520ea85999f320d5624563e5a1f 182 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 6.8E-22 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 M634_01115 be626520ea85999f320d5624563e5a1f 182 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 12-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site M634_01115 be626520ea85999f320d5624563e5a1f 182 SUPERFAMILY SSF82679 6 116 4.58E-40 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 M634_01115 be626520ea85999f320d5624563e5a1f 182 SMART SM00738 6 115 1.0E-50 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 M634_01115 be626520ea85999f320d5624563e5a1f 182 SUPERFAMILY SSF50104 126 181 3.31E-19 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily M634_01115 be626520ea85999f320d5624563e5a1f 182 Gene3D G3DSA:3.30.70.940 1 122 3.3E-47 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 M634_01115 be626520ea85999f320d5624563e5a1f 182 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 25.932 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 M634_01115 be626520ea85999f320d5624563e5a1f 182 SMART SM00739 127 154 3.9E-4 T 12-10-2018 IPR005824 KOW M634_01115 be626520ea85999f320d5624563e5a1f 182 Pfam PF02357 Transcription termination factor nusG 7 112 8.8E-27 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 M634_01115 be626520ea85999f320d5624563e5a1f 182 Pfam PF00467 KOW motif 131 162 4.8E-7 T 12-10-2018 IPR005824 KOW M634_03565 d06fa987b2644cd13f44f6972f0fc467 330 Pfam PF13343 Bacterial extracellular solute-binding protein 76 294 4.7E-22 T 12-10-2018 M634_03565 d06fa987b2644cd13f44f6972f0fc467 330 Gene3D G3DSA:3.40.190.10 26 300 4.9E-117 T 12-10-2018 M634_03565 d06fa987b2644cd13f44f6972f0fc467 330 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 21 324 1.0E-142 T 12-10-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030975 M634_03565 d06fa987b2644cd13f44f6972f0fc467 330 Gene3D G3DSA:3.40.190.10 126 325 4.9E-117 T 12-10-2018 M634_03565 d06fa987b2644cd13f44f6972f0fc467 330 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 13 329 2.5E-145 T 12-10-2018 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria GO:0015888|GO:0030288|GO:0030975 M634_03565 d06fa987b2644cd13f44f6972f0fc467 330 SUPERFAMILY SSF53850 24 325 4.21E-68 T 12-10-2018 M634_10370 32ca70193bd7ef405289dd2b400c87a5 475 Gene3D G3DSA:3.40.309.10 255 442 1.4E-176 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 M634_10370 32ca70193bd7ef405289dd2b400c87a5 475 Gene3D G3DSA:3.40.605.10 19 465 1.4E-176 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 M634_10370 32ca70193bd7ef405289dd2b400c87a5 475 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 23 468 2.8E-199 T 12-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 M634_10370 32ca70193bd7ef405289dd2b400c87a5 475 SUPERFAMILY SSF53720 18 473 2.49E-159 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 M634_10370 32ca70193bd7ef405289dd2b400c87a5 475 Pfam PF00171 Aldehyde dehydrogenase family 18 469 1.5E-163 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 M634_10370 32ca70193bd7ef405289dd2b400c87a5 475 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 M634_10370 32ca70193bd7ef405289dd2b400c87a5 475 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 M634_15675 9e5076dd066720b2e4a59c716195475a 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.5E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M634_15675 9e5076dd066720b2e4a59c716195475a 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.5E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M634_15675 9e5076dd066720b2e4a59c716195475a 336 SUPERFAMILY SSF53822 61 325 8.35E-66 T 12-10-2018 IPR028082 Periplasmic binding protein-like I M634_15675 9e5076dd066720b2e4a59c716195475a 336 SMART SM00354 1 71 5.7E-31 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M634_15675 9e5076dd066720b2e4a59c716195475a 336 Gene3D G3DSA:3.40.50.2300 62 306 1.1E-64 T 12-10-2018 M634_15675 9e5076dd066720b2e4a59c716195475a 336 Pfam PF13377 Periplasmic binding protein-like domain 168 325 6.1E-29 T 12-10-2018 M634_15675 9e5076dd066720b2e4a59c716195475a 336 Gene3D G3DSA:1.10.260.40 1 57 1.2E-22 T 12-10-2018 M634_15675 9e5076dd066720b2e4a59c716195475a 336 SUPERFAMILY SSF47413 2 59 1.13E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M634_15675 9e5076dd066720b2e4a59c716195475a 336 Gene3D G3DSA:3.40.50.2300 160 289 1.1E-64 T 12-10-2018 M634_15675 9e5076dd066720b2e4a59c716195475a 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 4.8E-19 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M634_03980 c047c421f065929bf2abd1cfb099a856 267 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 264 17.552 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 M634_03980 c047c421f065929bf2abd1cfb099a856 267 Pfam PF02673 Bacitracin resistance protein BacA 6 258 4.2E-82 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 M634_03980 c047c421f065929bf2abd1cfb099a856 267 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 6 257 1.6E-73 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 M634_20200 fa83b40dbd1292f05f54b3e085550f0f 337 Gene3D G3DSA:3.20.20.140 1 336 1.2E-106 T 12-10-2018 M634_20200 fa83b40dbd1292f05f54b3e085550f0f 337 SUPERFAMILY SSF51556 4 324 1.61E-91 T 12-10-2018 IPR032466 Metal-dependent hydrolase M634_20200 fa83b40dbd1292f05f54b3e085550f0f 337 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 8 325 5.7E-115 T 12-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 M634_20200 fa83b40dbd1292f05f54b3e085550f0f 337 Pfam PF00962 Adenosine/AMP deaminase 8 323 1.2E-74 T 12-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 M634_20200 fa83b40dbd1292f05f54b3e085550f0f 337 Hamap MF_01962 Adenine deaminase. 4 316 86.851 T 12-10-2018 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 M634_06135 25cd18bdbdb5bc2fdd4236c944153403 462 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 227 440 9.3E-47 T 12-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 M634_06135 25cd18bdbdb5bc2fdd4236c944153403 462 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 6 215 1.2E-59 T 12-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 M634_06135 25cd18bdbdb5bc2fdd4236c944153403 462 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 153 165 - T 12-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 M634_06135 25cd18bdbdb5bc2fdd4236c944153403 462 Gene3D G3DSA:1.20.1250.20 226 455 3.6E-61 T 12-10-2018 M634_06135 25cd18bdbdb5bc2fdd4236c944153403 462 Gene3D G3DSA:1.20.1250.20 1 225 1.0E-73 T 12-10-2018 M634_06135 25cd18bdbdb5bc2fdd4236c944153403 462 SUPERFAMILY SSF103473 7 435 3.4E-43 T 12-10-2018 IPR036259 MFS transporter superfamily M634_06135 25cd18bdbdb5bc2fdd4236c944153403 462 Pfam PF00854 POT family 230 405 4.0E-31 T 12-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 M634_06135 25cd18bdbdb5bc2fdd4236c944153403 462 Pfam PF00854 POT family 85 197 4.7E-29 T 12-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 M634_16680 2ec369559a29f70683763eac01fb252a 1171 SUPERFAMILY SSF56935 865 1145 2.38E-8 T 12-10-2018 M634_01535 fc7b353e1cb80b236ed47a08af371ac1 419 SUPERFAMILY SSF52540 90 371 2.93E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_01535 fc7b353e1cb80b236ed47a08af371ac1 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 5.2E-22 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M634_01535 fc7b353e1cb80b236ed47a08af371ac1 419 SUPERFAMILY SSF50249 48 125 6.28E-29 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_01535 fc7b353e1cb80b236ed47a08af371ac1 419 SMART SM00382 170 355 6.3E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_01535 fc7b353e1cb80b236ed47a08af371ac1 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 7.0E-220 T 12-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 M634_01535 fc7b353e1cb80b236ed47a08af371ac1 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 252.642 T 12-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 M634_01535 fc7b353e1cb80b236ed47a08af371ac1 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 5.0E-32 T 12-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 M634_01535 fc7b353e1cb80b236ed47a08af371ac1 419 Gene3D G3DSA:1.10.720.10 1 47 2.0E-22 T 12-10-2018 M634_01535 fc7b353e1cb80b236ed47a08af371ac1 419 Gene3D G3DSA:2.40.50.140 48 117 1.1E-34 T 12-10-2018 M634_01535 fc7b353e1cb80b236ed47a08af371ac1 419 Gene3D G3DSA:3.40.50.300 130 417 7.3E-134 T 12-10-2018 M634_01535 fc7b353e1cb80b236ed47a08af371ac1 419 SUPERFAMILY SSF68912 1 46 6.28E-12 T 12-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily M634_01535 fc7b353e1cb80b236ed47a08af371ac1 419 SMART SM00959 5 47 6.9E-17 T 12-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 M634_01535 fc7b353e1cb80b236ed47a08af371ac1 419 SMART SM00357 52 118 1.7E-17 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 M634_01535 fc7b353e1cb80b236ed47a08af371ac1 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 9.9E-17 T 12-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 M634_23565 c6c3134fc01769b8f7f6416ee7d48d06 484 SUPERFAMILY SSF52540 41 208 1.71E-22 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_23565 c6c3134fc01769b8f7f6416ee7d48d06 484 Gene3D G3DSA:3.40.50.300 241 464 2.2E-41 T 12-10-2018 M634_23565 c6c3134fc01769b8f7f6416ee7d48d06 484 SUPERFAMILY SSF52540 243 456 2.43E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_23565 c6c3134fc01769b8f7f6416ee7d48d06 484 Pfam PF00005 ABC transporter 41 159 7.9E-11 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_23565 c6c3134fc01769b8f7f6416ee7d48d06 484 SMART SM00382 279 480 2.0E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_23565 c6c3134fc01769b8f7f6416ee7d48d06 484 Pfam PF00005 ABC transporter 271 422 8.0E-22 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_23565 c6c3134fc01769b8f7f6416ee7d48d06 484 Gene3D G3DSA:3.40.50.300 11 240 6.4E-24 T 12-10-2018 M634_03595 cc0d059e767749fe945af94e42d7c702 322 Gene3D G3DSA:3.40.190.10 117 255 5.4E-111 T 12-10-2018 M634_03595 cc0d059e767749fe945af94e42d7c702 322 SUPERFAMILY SSF53850 25 321 2.04E-88 T 12-10-2018 M634_03595 cc0d059e767749fe945af94e42d7c702 322 Pfam PF16868 NMT1-like family 30 319 1.6E-96 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family M634_03595 cc0d059e767749fe945af94e42d7c702 322 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 7 319 4.0E-113 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family M634_03595 cc0d059e767749fe945af94e42d7c702 322 Gene3D G3DSA:3.40.190.10 30 319 5.4E-111 T 12-10-2018 M634_18695 5bb00faa16b2961a39f1c11e0deba656 364 PIRSF PIRSF000014 1 364 6.8E-163 T 12-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 M634_18695 5bb00faa16b2961a39f1c11e0deba656 364 Gene3D G3DSA:1.10.3820.10 2 180 4.0E-36 T 12-10-2018 IPR038266 NapC/NirT cytochrome c superfamily M634_18695 5bb00faa16b2961a39f1c11e0deba656 364 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 5 174 4.1E-67 T 12-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal M634_18695 5bb00faa16b2961a39f1c11e0deba656 364 SUPERFAMILY SSF48695 11 176 2.15E-50 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily M634_23055 77d019d5bb977bc45941f9d6f0ea7f1f 159 SUPERFAMILY SSF141452 4 157 9.68E-36 T 12-10-2018 IPR036624 Hcp1-like superfamily M634_23055 77d019d5bb977bc45941f9d6f0ea7f1f 159 Pfam PF05638 Type VI secretion system effector, Hcp 6 133 5.0E-28 T 12-10-2018 IPR008514 Type VI secretion system effector, Hcp M634_23055 77d019d5bb977bc45941f9d6f0ea7f1f 159 Gene3D G3DSA:2.30.110.20 2 158 1.1E-33 T 12-10-2018 IPR036624 Hcp1-like superfamily M634_05895 22d32a1a6936c870ac9754db8b2c7ec3 437 Gene3D G3DSA:2.60.98.20 154 318 2.3E-22 T 12-10-2018 IPR037058 Flagellar hook protein FlgE superfamily M634_05895 22d32a1a6936c870ac9754db8b2c7ec3 437 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 2 419 4.6E-96 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G M634_05895 22d32a1a6936c870ac9754db8b2c7ec3 437 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 8 28 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site M634_05895 22d32a1a6936c870ac9754db8b2c7ec3 437 SUPERFAMILY SSF117143 78 398 1.02E-68 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like M634_05895 22d32a1a6936c870ac9754db8b2c7ec3 437 Pfam PF00460 Flagella basal body rod protein 3 32 7.3E-11 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 M634_05895 22d32a1a6936c870ac9754db8b2c7ec3 437 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 358 436 1.1E-15 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain M634_05895 22d32a1a6936c870ac9754db8b2c7ec3 437 Pfam PF07559 Flagellar basal body protein FlaE 181 317 4.1E-22 T 12-10-2018 IPR011491 Flagellar hook protein FlgE M634_22160 9afa09026528b4ae4949f57c7615d3b6 222 Gene3D G3DSA:3.40.50.1000 9 194 1.1E-42 T 12-10-2018 IPR023214 HAD superfamily M634_22160 9afa09026528b4ae4949f57c7615d3b6 222 SUPERFAMILY SSF56784 5 218 2.27E-44 T 12-10-2018 IPR036412 HAD-like superfamily M634_22160 9afa09026528b4ae4949f57c7615d3b6 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 188 9.3E-27 T 12-10-2018 M634_22160 9afa09026528b4ae4949f57c7615d3b6 222 Gene3D G3DSA:1.10.150.240 21 88 1.1E-42 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 M634_22160 9afa09026528b4ae4949f57c7615d3b6 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 9 189 5.4E-13 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M634_12950 3aefa1a98b5c585f6d2cd18fa43361db 342 PIRSF PIRSF500176 7 338 6.5E-109 T 12-10-2018 M634_12950 3aefa1a98b5c585f6d2cd18fa43361db 342 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 89 99 - T 12-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 M634_12950 3aefa1a98b5c585f6d2cd18fa43361db 342 Gene3D G3DSA:3.40.50.40 215 342 3.1E-45 T 12-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 M634_12950 3aefa1a98b5c585f6d2cd18fa43361db 342 SUPERFAMILY SSF53774 8 341 2.62E-114 T 12-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 M634_12950 3aefa1a98b5c585f6d2cd18fa43361db 342 SMART SM00870 10 329 1.9E-139 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 M634_12950 3aefa1a98b5c585f6d2cd18fa43361db 342 PIRSF PIRSF001220 5 340 3.8E-95 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 M634_12950 3aefa1a98b5c585f6d2cd18fa43361db 342 Gene3D G3DSA:3.40.50.1170 6 214 3.9E-93 T 12-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 M634_12950 3aefa1a98b5c585f6d2cd18fa43361db 342 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 13 21 - T 12-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 M634_12950 3aefa1a98b5c585f6d2cd18fa43361db 342 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 9 341 4.1E-116 T 12-10-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 M634_12950 3aefa1a98b5c585f6d2cd18fa43361db 342 PRINTS PR00139 Asparaginase/glutaminase family signature 88 106 8.7E-17 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 M634_12950 3aefa1a98b5c585f6d2cd18fa43361db 342 PRINTS PR00139 Asparaginase/glutaminase family signature 266 284 8.7E-17 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 M634_12950 3aefa1a98b5c585f6d2cd18fa43361db 342 PRINTS PR00139 Asparaginase/glutaminase family signature 11 22 8.7E-17 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 M634_12950 3aefa1a98b5c585f6d2cd18fa43361db 342 Pfam PF00710 Asparaginase, N-terminal 10 196 8.0E-67 T 12-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 M634_09490 c1c290e5a0c9307c59611ec01ffa3b7c 545 Pfam PF13654 AAA domain 105 287 4.2E-27 T 12-10-2018 M634_09490 c1c290e5a0c9307c59611ec01ffa3b7c 545 Gene3D G3DSA:3.30.230.10 290 531 1.5E-93 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M634_09490 c1c290e5a0c9307c59611ec01ffa3b7c 545 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 399 503 8.0E-11 T 12-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 M634_09490 c1c290e5a0c9307c59611ec01ffa3b7c 545 SUPERFAMILY SSF54211 313 505 4.55E-35 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M634_09490 c1c290e5a0c9307c59611ec01ffa3b7c 545 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 426 445 8.1E-11 T 12-10-2018 M634_09490 c1c290e5a0c9307c59611ec01ffa3b7c 545 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 396 415 8.1E-11 T 12-10-2018 M634_09490 c1c290e5a0c9307c59611ec01ffa3b7c 545 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 456 474 8.1E-11 T 12-10-2018 M634_09490 c1c290e5a0c9307c59611ec01ffa3b7c 545 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 313 329 8.1E-11 T 12-10-2018 M634_09490 c1c290e5a0c9307c59611ec01ffa3b7c 545 Gene3D G3DSA:3.40.50.300 67 202 3.7E-14 T 12-10-2018 M634_05140 8a22ca959255df171507f7b351d580a9 161 SUPERFAMILY SSF74982 8 139 4.97E-48 T 12-10-2018 IPR023620 Small protein B M634_05140 8a22ca959255df171507f7b351d580a9 161 Hamap MF_00023 SsrA-binding protein [smpB]. 1 161 69.072 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 M634_05140 8a22ca959255df171507f7b351d580a9 161 Pfam PF01668 SmpB protein 15 157 2.1E-55 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 M634_05140 8a22ca959255df171507f7b351d580a9 161 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 15 139 4.0E-61 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 M634_05140 8a22ca959255df171507f7b351d580a9 161 ProSitePatterns PS01317 SsrA-binding protein. 33 45 - T 12-10-2018 IPR020081 SsrA-binding protein, conserved site M634_05140 8a22ca959255df171507f7b351d580a9 161 TIGRFAM TIGR00086 smpB: SsrA-binding protein 15 157 2.3E-52 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 M634_05140 8a22ca959255df171507f7b351d580a9 161 Gene3D G3DSA:2.40.280.10 7 136 6.1E-44 T 12-10-2018 IPR023620 Small protein B M634_21985 078e41f505b8d236b88cc81622dceac1 431 Gene3D G3DSA:3.40.640.10 47 298 2.7E-186 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_21985 078e41f505b8d236b88cc81622dceac1 431 Pfam PF00464 Serine hydroxymethyltransferase 19 395 5.6E-175 T 12-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 M634_21985 078e41f505b8d236b88cc81622dceac1 431 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 17 431 53.306 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 M634_21985 078e41f505b8d236b88cc81622dceac1 431 SUPERFAMILY SSF53383 9 430 3.52E-181 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_21985 078e41f505b8d236b88cc81622dceac1 431 Gene3D G3DSA:3.90.1150.10 21 404 2.7E-186 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M634_21985 078e41f505b8d236b88cc81622dceac1 431 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 232 248 - T 12-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 M634_21985 078e41f505b8d236b88cc81622dceac1 431 PIRSF PIRSF000412 4 431 1.3E-167 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 M634_03295 96fd3b1d306a8d7654030b22d23764e0 274 SUPERFAMILY SSF50104 127 272 1.68E-61 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily M634_03295 96fd3b1d306a8d7654030b22d23764e0 274 SMART SM01382 124 252 5.1E-92 T 12-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 M634_03295 96fd3b1d306a8d7654030b22d23764e0 274 Gene3D G3DSA:2.30.30.30 115 195 7.5E-33 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 M634_03295 96fd3b1d306a8d7654030b22d23764e0 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 2.1E-130 T 12-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 M634_03295 96fd3b1d306a8d7654030b22d23764e0 274 SUPERFAMILY SSF50249 2 125 1.3E-49 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_03295 96fd3b1d306a8d7654030b22d23764e0 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 2.2E-56 T 12-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 M634_03295 96fd3b1d306a8d7654030b22d23764e0 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 1.5E-32 T 12-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_03295 96fd3b1d306a8d7654030b22d23764e0 274 PIRSF PIRSF002158 13 274 6.9E-101 T 12-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_03295 96fd3b1d306a8d7654030b22d23764e0 274 Gene3D G3DSA:4.10.950.10 196 274 1.1E-36 T 12-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03295 96fd3b1d306a8d7654030b22d23764e0 274 Gene3D G3DSA:2.40.50.140 1 114 9.5E-50 T 12-10-2018 M634_03295 96fd3b1d306a8d7654030b22d23764e0 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 12-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03295 96fd3b1d306a8d7654030b22d23764e0 274 SMART SM01383 42 118 1.7E-44 T 12-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_03295 96fd3b1d306a8d7654030b22d23764e0 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 47.389 T 12-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 M634_21600 2c0599f8dc168f0550b96086b620d677 461 SMART SM00327 149 393 3.6E-5 T 12-10-2018 IPR002035 von Willebrand factor, type A M634_21600 2c0599f8dc168f0550b96086b620d677 461 Pfam PF00092 von Willebrand factor type A domain 151 210 1.1E-5 T 12-10-2018 IPR002035 von Willebrand factor, type A M634_21600 2c0599f8dc168f0550b96086b620d677 461 SUPERFAMILY SSF53300 148 360 7.33E-22 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily M634_00345 699591b434c362d7ce9072621666aaeb 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 1.4E-42 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_00345 699591b434c362d7ce9072621666aaeb 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.818 T 12-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_00345 699591b434c362d7ce9072621666aaeb 124 PIRSF PIRSF002133 1 124 3.0E-54 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_00345 699591b434c362d7ce9072621666aaeb 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_00345 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 2.1E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_00345 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 2.1E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_00345 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 2.1E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_00345 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 2.1E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_00345 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 2.1E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_00345 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 2.1E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_00345 699591b434c362d7ce9072621666aaeb 124 Gene3D G3DSA:2.40.50.140 1 124 6.1E-64 T 12-10-2018 M634_00345 699591b434c362d7ce9072621666aaeb 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 8.5E-71 T 12-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_00345 699591b434c362d7ce9072621666aaeb 124 SUPERFAMILY SSF50249 3 123 2.83E-52 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_01830 ad5be436e8c39ea2deb69565d8b1fd60 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 166 186 1.7E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like M634_01830 ad5be436e8c39ea2deb69565d8b1fd60 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 198 212 1.7E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like M634_01830 ad5be436e8c39ea2deb69565d8b1fd60 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 230 244 1.7E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like M634_01830 ad5be436e8c39ea2deb69565d8b1fd60 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 264 291 1.7E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like M634_01830 ad5be436e8c39ea2deb69565d8b1fd60 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 426 445 1.7E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like M634_01830 ad5be436e8c39ea2deb69565d8b1fd60 468 Gene3D G3DSA:3.30.300.180 2 114 7.7E-42 T 12-10-2018 IPR038454 DnaA, N-terminal domain superfamily M634_01830 ad5be436e8c39ea2deb69565d8b1fd60 468 SMART SM00760 376 445 3.4E-45 T 12-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 M634_01830 ad5be436e8c39ea2deb69565d8b1fd60 468 Gene3D G3DSA:1.10.8.60 299 369 1.6E-24 T 12-10-2018 M634_01830 ad5be436e8c39ea2deb69565d8b1fd60 468 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 467 34.548 T 12-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 M634_01830 ad5be436e8c39ea2deb69565d8b1fd60 468 Gene3D G3DSA:1.10.1750.10 375 468 1.5E-39 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 M634_01830 ad5be436e8c39ea2deb69565d8b1fd60 468 Pfam PF00308 Bacterial dnaA protein 134 350 3.4E-98 T 12-10-2018 IPR013317 Chromosomal replication initiator protein DnaA M634_01830 ad5be436e8c39ea2deb69565d8b1fd60 468 Gene3D G3DSA:3.40.50.300 119 297 1.4E-49 T 12-10-2018 M634_01830 ad5be436e8c39ea2deb69565d8b1fd60 468 Pfam PF11638 DnaA N-terminal domain 4 65 4.9E-20 T 12-10-2018 IPR024633 DnaA N-terminal domain M634_01830 ad5be436e8c39ea2deb69565d8b1fd60 468 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 377 445 1.8E-32 T 12-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 M634_01830 ad5be436e8c39ea2deb69565d8b1fd60 468 ProSitePatterns PS01008 DnaA protein signature. 426 445 - T 12-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 M634_01830 ad5be436e8c39ea2deb69565d8b1fd60 468 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 466 2.1E-187 T 12-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 M634_01830 ad5be436e8c39ea2deb69565d8b1fd60 468 SUPERFAMILY SSF52540 133 344 1.07E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_01830 ad5be436e8c39ea2deb69565d8b1fd60 468 SMART SM00382 165 378 4.6E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_01830 ad5be436e8c39ea2deb69565d8b1fd60 468 SUPERFAMILY SSF48295 364 467 3.66E-38 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 M634_05990 3f1f2a9d99f68eef39dc188c99b0ef0f 670 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 4 319 3.3E-135 T 12-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 M634_05990 3f1f2a9d99f68eef39dc188c99b0ef0f 670 SMART SM00532 4 449 4.4E-281 T 12-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 M634_05990 3f1f2a9d99f68eef39dc188c99b0ef0f 670 SUPERFAMILY SSF47781 404 584 2.82E-61 T 12-10-2018 IPR010994 RuvA domain 2-like M634_05990 3f1f2a9d99f68eef39dc188c99b0ef0f 670 Gene3D G3DSA:1.10.150.20 507 584 1.2E-29 T 12-10-2018 M634_05990 3f1f2a9d99f68eef39dc188c99b0ef0f 670 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 408 435 3.3E-12 T 12-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 M634_05990 3f1f2a9d99f68eef39dc188c99b0ef0f 670 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 332 347 - T 12-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site M634_05990 3f1f2a9d99f68eef39dc188c99b0ef0f 670 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 116 145 - T 12-10-2018 IPR018239 NAD-dependent DNA ligase, active site M634_05990 3f1f2a9d99f68eef39dc188c99b0ef0f 670 Pfam PF14520 Helix-hairpin-helix domain 447 503 6.0E-6 T 12-10-2018 M634_05990 3f1f2a9d99f68eef39dc188c99b0ef0f 670 Gene3D G3DSA:3.30.470.90 70 318 1.2E-102 T 12-10-2018 M634_05990 3f1f2a9d99f68eef39dc188c99b0ef0f 670 Hamap MF_01588 DNA ligase [ligA]. 3 669 54.256 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 M634_05990 3f1f2a9d99f68eef39dc188c99b0ef0f 670 Gene3D G3DSA:2.20.70.80 392 432 9.7E-21 T 12-10-2018 M634_05990 3f1f2a9d99f68eef39dc188c99b0ef0f 670 SUPERFAMILY SSF52113 595 670 1.42E-18 T 12-10-2018 IPR036420 BRCT domain superfamily M634_05990 3f1f2a9d99f68eef39dc188c99b0ef0f 670 SUPERFAMILY SSF56091 4 317 1.33E-125 T 12-10-2018 M634_05990 3f1f2a9d99f68eef39dc188c99b0ef0f 670 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 323 399 1.2E-35 T 12-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 M634_05990 3f1f2a9d99f68eef39dc188c99b0ef0f 670 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 595 669 1.8E-14 T 12-10-2018 IPR001357 BRCT domain M634_05990 3f1f2a9d99f68eef39dc188c99b0ef0f 670 Gene3D G3DSA:3.40.50.10190 585 670 5.6E-28 T 12-10-2018 IPR036420 BRCT domain superfamily M634_05990 3f1f2a9d99f68eef39dc188c99b0ef0f 670 Gene3D G3DSA:2.40.50.140 319 391 2.4E-34 T 12-10-2018 M634_05990 3f1f2a9d99f68eef39dc188c99b0ef0f 670 SMART SM00278 447 466 95.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 M634_05990 3f1f2a9d99f68eef39dc188c99b0ef0f 670 SMART SM00278 545 564 720.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 M634_05990 3f1f2a9d99f68eef39dc188c99b0ef0f 670 SMART SM00278 481 500 6.7 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 M634_05990 3f1f2a9d99f68eef39dc188c99b0ef0f 670 SMART SM00292 595 670 6.1E-11 T 12-10-2018 IPR001357 BRCT domain M634_05990 3f1f2a9d99f68eef39dc188c99b0ef0f 670 Gene3D G3DSA:1.10.150.20 433 505 9.2E-30 T 12-10-2018 M634_05990 3f1f2a9d99f68eef39dc188c99b0ef0f 670 PIRSF PIRSF001604 1 670 3.3E-256 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 M634_05990 3f1f2a9d99f68eef39dc188c99b0ef0f 670 Pfam PF12826 Helix-hairpin-helix motif 511 574 6.5E-24 T 12-10-2018 M634_05990 3f1f2a9d99f68eef39dc188c99b0ef0f 670 Gene3D G3DSA:1.10.287.610 2 69 7.9E-29 T 12-10-2018 M634_05990 3f1f2a9d99f68eef39dc188c99b0ef0f 670 SUPERFAMILY SSF50249 319 400 1.56E-28 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_05990 3f1f2a9d99f68eef39dc188c99b0ef0f 670 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 12 665 2.0E-266 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 M634_12720 ebdb70d413aca3215665fcc7df228a19 348 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 3 348 27.174 T 12-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 M634_12720 ebdb70d413aca3215665fcc7df228a19 348 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 348 1.5E-138 T 12-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 M634_12720 ebdb70d413aca3215665fcc7df228a19 348 Pfam PF03116 NQR2, RnfD, RnfE family 6 347 2.6E-106 T 12-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 M634_18590 7a63127f38f5ad547235b3d94ad7c30d 896 Gene3D G3DSA:2.70.98.50 35 275 3.5E-82 T 12-10-2018 M634_18590 7a63127f38f5ad547235b3d94ad7c30d 896 Gene3D G3DSA:1.10.287.100 276 314 7.4E-14 T 12-10-2018 M634_18590 7a63127f38f5ad547235b3d94ad7c30d 896 SUPERFAMILY SSF48208 325 891 3.78E-67 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 M634_06945 2c3e34cb46a135cc460489f255213046 423 Pfam PF04285 Protein of unknown function (DUF444) 3 421 1.5E-187 T 12-10-2018 IPR006698 Uncharacterised protein family UPF0229 M634_06945 2c3e34cb46a135cc460489f255213046 423 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 423 40.551 T 12-10-2018 IPR006698 Uncharacterised protein family UPF0229 M634_07680 be6d879d740f79fedd6fd383431f1e39 275 Pfam PF13460 NAD(P)H-binding 9 188 3.8E-13 T 12-10-2018 IPR016040 NAD(P)-binding domain M634_07680 be6d879d740f79fedd6fd383431f1e39 275 Gene3D G3DSA:3.40.50.720 1 275 6.3E-45 T 12-10-2018 M634_07680 be6d879d740f79fedd6fd383431f1e39 275 SUPERFAMILY SSF51735 8 268 5.88E-26 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_13355 09727ec9f6e19e13c2f8aa36cc6548e7 1426 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 1381 1422 3.5E-14 T 12-10-2018 IPR020011 Motility protein FimV, C-terminal M634_13355 09727ec9f6e19e13c2f8aa36cc6548e7 1426 Gene3D G3DSA:3.40.1350.10 1089 1130 4.5E-5 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 M634_13355 09727ec9f6e19e13c2f8aa36cc6548e7 1426 Gene3D G3DSA:3.40.1350.10 913 956 5.2E-6 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 M634_13355 09727ec9f6e19e13c2f8aa36cc6548e7 1426 Gene3D G3DSA:3.40.1350.10 957 999 4.4E-5 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 M634_13355 09727ec9f6e19e13c2f8aa36cc6548e7 1426 Gene3D G3DSA:3.40.1350.10 1000 1042 2.0E-6 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 M634_13355 09727ec9f6e19e13c2f8aa36cc6548e7 1426 Gene3D G3DSA:3.40.1350.10 1043 1088 1.3E-6 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 M634_13355 09727ec9f6e19e13c2f8aa36cc6548e7 1426 Gene3D G3DSA:1.20.58.2200 1365 1423 6.7E-13 T 12-10-2018 IPR038440 FimV, C-terminal domain superfamily M634_13355 09727ec9f6e19e13c2f8aa36cc6548e7 1426 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 72 142 4.5E-25 T 12-10-2018 IPR020012 Motility protein FimV, N-terminal M634_13980 0071870ce5928c693a0a946932941d2e 281 Gene3D G3DSA:1.10.8.10 1 56 2.0E-25 T 12-10-2018 M634_13980 0071870ce5928c693a0a946932941d2e 281 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 12-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 M634_13980 0071870ce5928c693a0a946932941d2e 281 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 12-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 M634_13980 0071870ce5928c693a0a946932941d2e 281 SUPERFAMILY SSF54713 56 138 1.9E-18 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 M634_13980 0071870ce5928c693a0a946932941d2e 281 Hamap MF_00050 Elongation factor Ts [tsf]. 1 280 76.638 T 12-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 M634_13980 0071870ce5928c693a0a946932941d2e 281 Gene3D G3DSA:3.30.479.20 57 140 4.8E-27 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 M634_13980 0071870ce5928c693a0a946932941d2e 281 SUPERFAMILY SSF46934 4 54 1.63E-17 T 12-10-2018 IPR009060 UBA-like superfamily GO:0005515 M634_13980 0071870ce5928c693a0a946932941d2e 281 Gene3D G3DSA:1.10.286.20 185 224 3.1E-22 T 12-10-2018 M634_13980 0071870ce5928c693a0a946932941d2e 281 SUPERFAMILY SSF54713 142 278 1.22E-45 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 M634_13980 0071870ce5928c693a0a946932941d2e 281 Pfam PF00889 Elongation factor TS 71 261 1.0E-62 T 12-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 M634_13980 0071870ce5928c693a0a946932941d2e 281 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 280 3.7E-104 T 12-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 M634_07725 c98951fd5a58d2478d0e5c3d5583b1dd 820 SUPERFAMILY SSF50692 669 817 2.49E-42 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily M634_07725 c98951fd5a58d2478d0e5c3d5583b1dd 820 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 28 2.1E-4 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal M634_07725 c98951fd5a58d2478d0e5c3d5583b1dd 820 Gene3D G3DSA:3.40.228.10 179 641 5.9E-240 T 12-10-2018 M634_07725 c98951fd5a58d2478d0e5c3d5583b1dd 820 Gene3D G3DSA:2.40.40.20 649 813 3.1E-48 T 12-10-2018 M634_07725 c98951fd5a58d2478d0e5c3d5583b1dd 820 Gene3D G3DSA:3.90.55.10 82 615 5.9E-240 T 12-10-2018 M634_07725 c98951fd5a58d2478d0e5c3d5583b1dd 820 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 503 520 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 M634_07725 c98951fd5a58d2478d0e5c3d5583b1dd 820 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 716 743 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 M634_07725 c98951fd5a58d2478d0e5c3d5583b1dd 820 Pfam PF01568 Molydopterin dinucleotide binding domain 676 796 7.3E-24 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 M634_07725 c98951fd5a58d2478d0e5c3d5583b1dd 820 SUPERFAMILY SSF53706 42 660 1.1E-167 T 12-10-2018 M634_07725 c98951fd5a58d2478d0e5c3d5583b1dd 820 Gene3D G3DSA:3.40.50.740 87 569 5.9E-240 T 12-10-2018 M634_07725 c98951fd5a58d2478d0e5c3d5583b1dd 820 Pfam PF00384 Molybdopterin oxidoreductase 87 560 1.5E-79 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M634_07725 c98951fd5a58d2478d0e5c3d5583b1dd 820 TIGRFAM TIGR02164 torA: trimethylamine-N-oxide reductase TorA 1 819 0.0 T 12-10-2018 IPR011887 Trimethylamine-N-oxide reductase TorA GO:0030151|GO:0042597|GO:0050626 M634_01870 6098e29f19c022a71a490e101cee033a 144 Pfam PF00258 Flavodoxin 4 136 2.3E-21 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 M634_01870 6098e29f19c022a71a490e101cee033a 144 SUPERFAMILY SSF52218 2 142 1.7E-39 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M634_01870 6098e29f19c022a71a490e101cee033a 144 Gene3D G3DSA:3.40.50.360 1 144 1.9E-44 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M634_02930 e503b02d032b582f20a925c4944022fc 399 Gene3D G3DSA:3.40.50.1950 1 186 2.3E-55 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 M634_02930 e503b02d032b582f20a925c4944022fc 399 Gene3D G3DSA:3.40.50.10300 187 399 9.7E-83 T 12-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 M634_02930 e503b02d032b582f20a925c4944022fc 399 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 186 371 8.1E-76 T 12-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 M634_02930 e503b02d032b582f20a925c4944022fc 399 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 395 2.8E-152 T 12-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 M634_02930 e503b02d032b582f20a925c4944022fc 399 Pfam PF02441 Flavoprotein 7 179 6.5E-43 T 12-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 M634_02930 e503b02d032b582f20a925c4944022fc 399 SUPERFAMILY SSF102645 184 398 1.57E-78 T 12-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 M634_02930 e503b02d032b582f20a925c4944022fc 399 SUPERFAMILY SSF52507 1 182 1.31E-60 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 M634_02860 665edd365ffe0a1992eb8f6110b34cbf 347 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 161 341 5.0E-28 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_02860 665edd365ffe0a1992eb8f6110b34cbf 347 SUPERFAMILY SSF161098 139 325 5.1E-20 T 12-10-2018 IPR035906 MetI-like superfamily M634_02860 665edd365ffe0a1992eb8f6110b34cbf 347 Gene3D G3DSA:1.10.3720.10 133 339 3.3E-18 T 12-10-2018 IPR035906 MetI-like superfamily M634_13820 944f706234ddec63b812e43ec5f9a102 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 178 339 2.6E-40 T 12-10-2018 IPR010918 PurM-like, C-terminal domain M634_13820 944f706234ddec63b812e43ec5f9a102 346 Gene3D G3DSA:3.90.650.10 172 346 1.0E-73 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily M634_13820 944f706234ddec63b812e43ec5f9a102 346 SUPERFAMILY SSF55326 8 171 2.99E-54 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily M634_13820 944f706234ddec63b812e43ec5f9a102 346 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 335 1.5E-151 T 12-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 M634_13820 944f706234ddec63b812e43ec5f9a102 346 SUPERFAMILY SSF56042 172 341 2.99E-62 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily M634_13820 944f706234ddec63b812e43ec5f9a102 346 Gene3D G3DSA:3.30.1330.10 7 171 3.2E-70 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily M634_13820 944f706234ddec63b812e43ec5f9a102 346 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 345 47.865 T 12-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 M634_13820 944f706234ddec63b812e43ec5f9a102 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 60 165 1.1E-15 T 12-10-2018 IPR016188 PurM-like, N-terminal domain M634_14215 570db32af8f07453fbb0fa72a08bf89a 403 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 216 235 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site M634_14215 570db32af8f07453fbb0fa72a08bf89a 403 PIRSF PIRSF005572 21 403 1.0E-52 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 M634_14215 570db32af8f07453fbb0fa72a08bf89a 403 Gene3D G3DSA:3.90.1150.10 7 395 6.7E-163 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M634_14215 570db32af8f07453fbb0fa72a08bf89a 403 SUPERFAMILY SSF53383 2 400 4.98E-125 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_14215 570db32af8f07453fbb0fa72a08bf89a 403 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 2 403 2.6E-157 T 12-10-2018 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 M634_14215 570db32af8f07453fbb0fa72a08bf89a 403 Pfam PF00266 Aminotransferase class-V 24 392 3.7E-150 T 12-10-2018 IPR000192 Aminotransferase class V domain M634_14215 570db32af8f07453fbb0fa72a08bf89a 403 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 6 402 1.3E-167 T 12-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 M634_14215 570db32af8f07453fbb0fa72a08bf89a 403 Gene3D G3DSA:3.40.640.10 35 295 6.7E-163 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_15285 c3b7a982cf4ba04917f422397c2b71a5 225 SMART SM00535 20 148 6.3E-56 T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 M634_15285 c3b7a982cf4ba04917f422397c2b71a5 225 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 8 222 4.3E-75 T 12-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 M634_15285 c3b7a982cf4ba04917f422397c2b71a5 225 SUPERFAMILY SSF54768 108 222 5.19E-29 T 12-10-2018 M634_15285 c3b7a982cf4ba04917f422397c2b71a5 225 Gene3D G3DSA:3.30.160.20 153 224 3.7E-20 T 12-10-2018 M634_15285 c3b7a982cf4ba04917f422397c2b71a5 225 Pfam PF00035 Double-stranded RNA binding motif 155 222 5.8E-16 T 12-10-2018 IPR014720 Double-stranded RNA-binding domain M634_15285 c3b7a982cf4ba04917f422397c2b71a5 225 Pfam PF14622 Ribonuclease-III-like 20 140 3.4E-33 T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 M634_15285 c3b7a982cf4ba04917f422397c2b71a5 225 SMART SM00358 155 223 1.4E-22 T 12-10-2018 IPR014720 Double-stranded RNA-binding domain M634_15285 c3b7a982cf4ba04917f422397c2b71a5 225 Gene3D G3DSA:1.10.1520.10 2 146 1.0E-44 T 12-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 M634_15285 c3b7a982cf4ba04917f422397c2b71a5 225 SUPERFAMILY SSF69065 5 158 6.98E-50 T 12-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 M634_15285 c3b7a982cf4ba04917f422397c2b71a5 225 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 M634_15285 c3b7a982cf4ba04917f422397c2b71a5 225 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 30.029 T 12-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 M634_14235 207ad71a70ecf9341e9d79e83f8e568e 151 Pfam PF11012 Protein of unknown function (DUF2850) 65 142 1.4E-30 T 12-10-2018 IPR021271 Protein of unknown function DUF2850 M634_23520 315b7bc31f0c16869314b280bb40e5a7 275 SUPERFAMILY SSF53850 24 270 9.83E-66 T 12-10-2018 M634_23520 315b7bc31f0c16869314b280bb40e5a7 275 Pfam PF12727 PBP superfamily domain 40 254 1.2E-36 T 12-10-2018 IPR024370 PBP domain M634_23520 315b7bc31f0c16869314b280bb40e5a7 275 Gene3D G3DSA:3.40.190.10 97 231 3.3E-81 T 12-10-2018 M634_23520 315b7bc31f0c16869314b280bb40e5a7 275 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 18 270 3.3E-67 T 12-10-2018 IPR011862 Phosphate binding protein GO:0042301 M634_23520 315b7bc31f0c16869314b280bb40e5a7 275 Gene3D G3DSA:3.40.190.10 26 269 3.3E-81 T 12-10-2018 M634_08325 070ac683e597a207494e9cfb26acddbf 117 SUPERFAMILY SSF74731 2 116 5.62E-50 T 12-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_08325 070ac683e597a207494e9cfb26acddbf 117 Gene3D G3DSA:1.10.1900.20 56 117 1.0E-28 T 12-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_08325 070ac683e597a207494e9cfb26acddbf 117 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_08325 070ac683e597a207494e9cfb26acddbf 117 Gene3D G3DSA:1.10.720.90 2 55 1.1E-24 T 12-10-2018 M634_08325 070ac683e597a207494e9cfb26acddbf 117 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.596 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_08325 070ac683e597a207494e9cfb26acddbf 117 Pfam PF00453 Ribosomal protein L20 3 108 9.9E-49 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_08325 070ac683e597a207494e9cfb26acddbf 117 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 2.5E-52 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_08325 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 42 71 4.8E-42 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_08325 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 12 41 4.8E-42 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_08325 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 75 101 4.8E-42 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_08325 070ac683e597a207494e9cfb26acddbf 117 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 2.0E-22 T 12-10-2018 M634_24620 a5c16f182df117e1c8b102dab8c42fe1 134 Gene3D G3DSA:1.10.287.1050 1 83 5.4E-23 T 12-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 M634_24620 a5c16f182df117e1c8b102dab8c42fe1 134 SUPERFAMILY SSF81273 2 58 2.35E-12 T 12-10-2018 M634_24620 a5c16f182df117e1c8b102dab8c42fe1 134 Pfam PF00816 H-NS histone family 35 128 2.1E-19 T 12-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 M634_24620 a5c16f182df117e1c8b102dab8c42fe1 134 SMART SM00528 87 134 1.1E-20 T 12-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 M634_24620 a5c16f182df117e1c8b102dab8c42fe1 134 SUPERFAMILY SSF81273 92 133 2.47E-10 T 12-10-2018 M634_24620 a5c16f182df117e1c8b102dab8c42fe1 134 Gene3D G3DSA:4.10.430.10 91 134 3.4E-21 T 12-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 M634_24620 a5c16f182df117e1c8b102dab8c42fe1 134 PIRSF PIRSF002096 1 134 2.8E-47 T 12-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 M634_03185 42fc5212e1e5916f2d56dc4214670608 292 SUPERFAMILY SSF53448 2 269 5.01E-64 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M634_03185 42fc5212e1e5916f2d56dc4214670608 292 Gene3D G3DSA:3.90.550.10 1 276 6.9E-81 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M634_03185 42fc5212e1e5916f2d56dc4214670608 292 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 263 1.8E-123 T 12-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 M634_03185 42fc5212e1e5916f2d56dc4214670608 292 Pfam PF00483 Nucleotidyl transferase 9 265 3.9E-31 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 M634_00095 ac95bd1ff0c980126330979c29248f78 623 Pfam PF00175 Oxidoreductase NAD-binding domain 481 587 8.1E-19 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 M634_00095 ac95bd1ff0c980126330979c29248f78 623 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 19 623 49.457 T 12-10-2018 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 M634_00095 ac95bd1ff0c980126330979c29248f78 623 Gene3D G3DSA:1.20.990.10 304 408 3.6E-72 T 12-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 M634_00095 ac95bd1ff0c980126330979c29248f78 623 PRINTS PR00369 Flavodoxin signature 192 211 9.9E-10 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 M634_00095 ac95bd1ff0c980126330979c29248f78 623 PRINTS PR00369 Flavodoxin signature 168 178 9.9E-10 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 M634_00095 ac95bd1ff0c980126330979c29248f78 623 PRINTS PR00369 Flavodoxin signature 136 147 9.9E-10 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 M634_00095 ac95bd1ff0c980126330979c29248f78 623 PRINTS PR00369 Flavodoxin signature 88 101 9.9E-10 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 M634_00095 ac95bd1ff0c980126330979c29248f78 623 Gene3D G3DSA:3.40.50.360 77 240 8.3E-47 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M634_00095 ac95bd1ff0c980126330979c29248f78 623 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 27 623 9.3E-258 T 12-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 M634_00095 ac95bd1ff0c980126330979c29248f78 623 Pfam PF00667 FAD binding domain 256 448 5.9E-29 T 12-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 M634_00095 ac95bd1ff0c980126330979c29248f78 623 SUPERFAMILY SSF52343 468 623 5.37E-51 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M634_00095 ac95bd1ff0c980126330979c29248f78 623 Pfam PF00258 Flavodoxin 89 220 7.7E-29 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 M634_00095 ac95bd1ff0c980126330979c29248f78 623 Gene3D G3DSA:2.40.30.10 257 463 3.6E-72 T 12-10-2018 M634_00095 ac95bd1ff0c980126330979c29248f78 623 SUPERFAMILY SSF52218 86 233 2.92E-46 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M634_00095 ac95bd1ff0c980126330979c29248f78 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 410 417 1.5E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M634_00095 ac95bd1ff0c980126330979c29248f78 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 505 514 1.5E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M634_00095 ac95bd1ff0c980126330979c29248f78 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 443 452 1.5E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M634_00095 ac95bd1ff0c980126330979c29248f78 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 572 580 1.5E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M634_00095 ac95bd1ff0c980126330979c29248f78 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 480 499 1.5E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M634_00095 ac95bd1ff0c980126330979c29248f78 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 294 304 1.5E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M634_00095 ac95bd1ff0c980126330979c29248f78 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 518 529 1.5E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M634_00095 ac95bd1ff0c980126330979c29248f78 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 549 565 1.5E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M634_00095 ac95bd1ff0c980126330979c29248f78 623 SUPERFAMILY SSF63380 252 469 7.33E-63 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel M634_00095 ac95bd1ff0c980126330979c29248f78 623 PIRSF PIRSF000207 20 623 1.7E-282 T 12-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 M634_00095 ac95bd1ff0c980126330979c29248f78 623 Gene3D G3DSA:3.40.50.80 469 623 5.4E-60 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M634_08825 5d26849ec7c9418f0857f6ed64fa6c71 227 Pfam PF14518 Iron-containing redox enzyme 40 211 1.6E-25 T 12-10-2018 M634_08825 5d26849ec7c9418f0857f6ed64fa6c71 227 SUPERFAMILY SSF48613 3 219 5.56E-58 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 M634_08825 5d26849ec7c9418f0857f6ed64fa6c71 227 Gene3D G3DSA:1.20.910.10 3 225 3.5E-56 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 M634_08825 5d26849ec7c9418f0857f6ed64fa6c71 227 SMART SM01236 74 175 5.5E-8 T 12-10-2018 M634_04835 0a593c2b45cbfb7762d5a6eec43fccd2 350 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 346 47.032 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 M634_04835 0a593c2b45cbfb7762d5a6eec43fccd2 350 Gene3D G3DSA:2.40.10.240 64 163 1.6E-117 T 12-10-2018 M634_04835 0a593c2b45cbfb7762d5a6eec43fccd2 350 Pfam PF02547 Queuosine biosynthesis protein 3 345 2.1E-133 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 M634_04835 0a593c2b45cbfb7762d5a6eec43fccd2 350 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 345 1.5E-159 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 M634_04835 0a593c2b45cbfb7762d5a6eec43fccd2 350 Gene3D G3DSA:3.40.1780.10 14 345 1.6E-117 T 12-10-2018 M634_04835 0a593c2b45cbfb7762d5a6eec43fccd2 350 SUPERFAMILY SSF111337 1 345 2.09E-138 T 12-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 M634_00980 43a38a507f79df15ee5237d69e115783 711 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 14 124 1.2E-28 T 12-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 M634_00980 43a38a507f79df15ee5237d69e115783 711 Gene3D G3DSA:3.40.50.2300 1 129 1.1E-52 T 12-10-2018 M634_00980 43a38a507f79df15ee5237d69e115783 711 SUPERFAMILY SSF53383 130 562 3.02E-106 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_00980 43a38a507f79df15ee5237d69e115783 711 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 545 1.6E-189 T 12-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 M634_00980 43a38a507f79df15ee5237d69e115783 711 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 12-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 M634_00980 43a38a507f79df15ee5237d69e115783 711 PIRSF PIRSF009393 1 711 8.9E-289 T 12-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 M634_00980 43a38a507f79df15ee5237d69e115783 711 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 570 700 1.9E-46 T 12-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 M634_00980 43a38a507f79df15ee5237d69e115783 711 SUPERFAMILY SSF55904 568 708 4.45E-43 T 12-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 M634_00980 43a38a507f79df15ee5237d69e115783 711 Gene3D G3DSA:3.90.100.10 595 711 2.4E-46 T 12-10-2018 M634_00980 43a38a507f79df15ee5237d69e115783 711 Gene3D G3DSA:3.40.640.10 130 424 4.0E-91 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_00980 43a38a507f79df15ee5237d69e115783 711 Gene3D G3DSA:3.90.1150.10 425 594 9.3E-71 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M634_16410 77ede810860ba96d40c02b407ddfe13f 347 TIGRFAM TIGR02566 cas_Csy3: CRISPR type I-F/YPEST-associated protein Csy3 2 346 2.9E-137 T 12-10-2018 IPR013399 CRISPR-associated protein Csy3 M634_16410 77ede810860ba96d40c02b407ddfe13f 347 Pfam PF09615 CRISPR-associated protein (Cas_Csy3) 3 342 3.7E-94 T 12-10-2018 IPR013399 CRISPR-associated protein Csy3 M634_18855 dd88e64a5d274cb84851465ec0779450 455 PIRSF PIRSF037714 1 449 1.2E-154 T 12-10-2018 IPR017270 Putative MotA/TolQ/ExbB family protein M634_18855 dd88e64a5d274cb84851465ec0779450 455 Pfam PF01618 MotA/TolQ/ExbB proton channel family 306 425 2.3E-30 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel M634_09225 e06a91b849ae6652ca2068a2b73617c1 298 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 3 296 49.521 T 12-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 M634_09225 e06a91b849ae6652ca2068a2b73617c1 298 SUPERFAMILY SSF51621 5 294 1.44E-94 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 M634_09225 e06a91b849ae6652ca2068a2b73617c1 298 Gene3D G3DSA:3.20.20.60 2 298 9.2E-98 T 12-10-2018 M634_09225 e06a91b849ae6652ca2068a2b73617c1 298 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 6 295 6.7E-127 T 12-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 M634_09225 e06a91b849ae6652ca2068a2b73617c1 298 Pfam PF13714 Phosphoenolpyruvate phosphomutase 15 259 4.4E-46 T 12-10-2018 M634_09225 e06a91b849ae6652ca2068a2b73617c1 298 ProSitePatterns PS00161 Isocitrate lyase signature. 119 124 - T 12-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 M634_20015 58ba2279cbfcd2c1d1e8f299a4fee69e 289 SUPERFAMILY SSF53850 89 284 1.63E-28 T 12-10-2018 M634_20015 58ba2279cbfcd2c1d1e8f299a4fee69e 289 SUPERFAMILY SSF46785 1 107 9.47E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_20015 58ba2279cbfcd2c1d1e8f299a4fee69e 289 Gene3D G3DSA:3.40.190.10 174 249 4.6E-8 T 12-10-2018 M634_20015 58ba2279cbfcd2c1d1e8f299a4fee69e 289 Gene3D G3DSA:3.40.190.10 80 169 9.9E-14 T 12-10-2018 M634_20015 58ba2279cbfcd2c1d1e8f299a4fee69e 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 6.3E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_20015 58ba2279cbfcd2c1d1e8f299a4fee69e 289 Pfam PF03466 LysR substrate binding domain 88 283 5.2E-29 T 12-10-2018 IPR005119 LysR, substrate-binding M634_20015 58ba2279cbfcd2c1d1e8f299a4fee69e 289 Gene3D G3DSA:1.10.10.10 1 79 1.3E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_12385 47e7486aa4a2de2c0e6300c3ad2c007b 405 SUPERFAMILY SSF53067 86 395 1.06E-54 T 12-10-2018 M634_12385 47e7486aa4a2de2c0e6300c3ad2c007b 405 Pfam PF00480 ROK family 88 390 2.6E-70 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 M634_12385 47e7486aa4a2de2c0e6300c3ad2c007b 405 Gene3D G3DSA:1.10.10.10 2 81 5.5E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_12385 47e7486aa4a2de2c0e6300c3ad2c007b 405 Gene3D G3DSA:3.30.420.40 208 377 1.7E-109 T 12-10-2018 M634_12385 47e7486aa4a2de2c0e6300c3ad2c007b 405 Gene3D G3DSA:3.30.420.40 91 387 1.7E-109 T 12-10-2018 M634_12385 47e7486aa4a2de2c0e6300c3ad2c007b 405 SUPERFAMILY SSF46785 10 76 3.58E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_12385 47e7486aa4a2de2c0e6300c3ad2c007b 405 ProSitePatterns PS01125 ROK family signature. 218 245 - T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 M634_24190 a73be1a2b07decd59d1390b290d71743 719 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 510 534 8.9E-61 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M634_24190 a73be1a2b07decd59d1390b290d71743 719 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 538 557 8.9E-61 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M634_24190 a73be1a2b07decd59d1390b290d71743 719 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 643 665 8.9E-61 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M634_24190 a73be1a2b07decd59d1390b290d71743 719 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 624 639 8.9E-61 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M634_24190 a73be1a2b07decd59d1390b290d71743 719 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 568 588 8.9E-61 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M634_24190 a73be1a2b07decd59d1390b290d71743 719 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 484 502 8.9E-61 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M634_24190 a73be1a2b07decd59d1390b290d71743 719 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 545 575 - T 12-10-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 M634_24190 a73be1a2b07decd59d1390b290d71743 719 SUPERFAMILY SSF50993 37 448 4.97E-104 T 12-10-2018 M634_24190 a73be1a2b07decd59d1390b290d71743 719 SUPERFAMILY SSF53474 452 697 1.62E-49 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_24190 a73be1a2b07decd59d1390b290d71743 719 Pfam PF00326 Prolyl oligopeptidase family 499 714 4.2E-69 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 M634_24190 a73be1a2b07decd59d1390b290d71743 719 Gene3D G3DSA:2.130.10.120 108 444 7.7E-257 T 12-10-2018 M634_24190 a73be1a2b07decd59d1390b290d71743 719 Gene3D G3DSA:3.40.50.1820 50 683 7.7E-257 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_24190 a73be1a2b07decd59d1390b290d71743 719 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 42 440 1.2E-130 T 12-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 M634_04590 a5e15292c234622f081b7217c75b8e14 308 SUPERFAMILY SSF53697 12 256 1.38E-73 T 12-10-2018 M634_04590 a5e15292c234622f081b7217c75b8e14 308 Pfam PF13580 SIS domain 48 172 1.7E-10 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 M634_04590 a5e15292c234622f081b7217c75b8e14 308 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 13 303 2.2E-131 T 12-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 M634_04590 a5e15292c234622f081b7217c75b8e14 308 Gene3D G3DSA:3.40.50.10490 8 225 7.9E-80 T 12-10-2018 M634_04590 a5e15292c234622f081b7217c75b8e14 308 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 192 209 - T 12-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 M634_04590 a5e15292c234622f081b7217c75b8e14 308 Gene3D G3DSA:1.10.8.1080 226 304 7.7E-31 T 12-10-2018 M634_04590 a5e15292c234622f081b7217c75b8e14 308 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 9 302 44.051 T 12-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 M634_05855 82300c3ce87211a1856a874bc7359961 141 Pfam PF05130 FlgN protein 2 131 4.9E-26 T 12-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 M634_05855 82300c3ce87211a1856a874bc7359961 141 Gene3D G3DSA:1.20.58.300 1 113 4.4E-8 T 12-10-2018 M634_05855 82300c3ce87211a1856a874bc7359961 141 SUPERFAMILY SSF140566 1 113 1.31E-23 T 12-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 M634_04310 fc43ced112f0a93bc2a24c5750a42663 489 Gene3D G3DSA:3.40.50.720 144 251 1.0E-16 T 12-10-2018 M634_04310 fc43ced112f0a93bc2a24c5750a42663 489 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 146 459 1.3E-26 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 M634_04310 fc43ced112f0a93bc2a24c5750a42663 489 SUPERFAMILY SSF51971 143 407 9.42E-67 T 12-10-2018 M634_04310 fc43ced112f0a93bc2a24c5750a42663 489 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 38 131 3.2E-24 T 12-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 M634_04310 fc43ced112f0a93bc2a24c5750a42663 489 PRINTS PR00419 Adrenodoxin reductase family signature 146 168 3.8E-23 T 12-10-2018 M634_04310 fc43ced112f0a93bc2a24c5750a42663 489 PRINTS PR00419 Adrenodoxin reductase family signature 211 221 3.8E-23 T 12-10-2018 M634_04310 fc43ced112f0a93bc2a24c5750a42663 489 PRINTS PR00419 Adrenodoxin reductase family signature 169 182 3.8E-23 T 12-10-2018 M634_04310 fc43ced112f0a93bc2a24c5750a42663 489 PRINTS PR00419 Adrenodoxin reductase family signature 286 300 3.8E-23 T 12-10-2018 M634_04310 fc43ced112f0a93bc2a24c5750a42663 489 Gene3D G3DSA:1.10.1060.10 10 143 3.9E-24 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 M634_04310 fc43ced112f0a93bc2a24c5750a42663 489 Gene3D G3DSA:3.50.50.60 252 406 1.0E-37 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_04310 fc43ced112f0a93bc2a24c5750a42663 489 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 478 1.8E-197 T 12-10-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 M634_04310 fc43ced112f0a93bc2a24c5750a42663 489 SUPERFAMILY SSF46548 2 155 1.88E-36 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 M634_02400 c6c0209ac3514d5dbb226821e96e0d0e 447 SUPERFAMILY SSF46689 354 444 8.6E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_02400 c6c0209ac3514d5dbb226821e96e0d0e 447 Gene3D G3DSA:3.40.50.300 129 312 3.7E-62 T 12-10-2018 M634_02400 c6c0209ac3514d5dbb226821e96e0d0e 447 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 427 447 1.5E-7 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M634_02400 c6c0209ac3514d5dbb226821e96e0d0e 447 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 410 427 1.5E-7 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M634_02400 c6c0209ac3514d5dbb226821e96e0d0e 447 Gene3D G3DSA:1.10.8.60 313 377 1.0E-19 T 12-10-2018 M634_02400 c6c0209ac3514d5dbb226821e96e0d0e 447 Pfam PF02954 Bacterial regulatory protein, Fis family 403 444 1.3E-13 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M634_02400 c6c0209ac3514d5dbb226821e96e0d0e 447 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M634_02400 c6c0209ac3514d5dbb226821e96e0d0e 447 SMART SM00382 162 305 4.0E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_02400 c6c0209ac3514d5dbb226821e96e0d0e 447 Gene3D G3DSA:1.10.10.60 403 445 1.5E-14 T 12-10-2018 M634_02400 c6c0209ac3514d5dbb226821e96e0d0e 447 SUPERFAMILY SSF52540 142 379 1.01E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_02400 c6c0209ac3514d5dbb226821e96e0d0e 447 Pfam PF00158 Sigma-54 interaction domain 142 308 4.1E-67 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 M634_02400 c6c0209ac3514d5dbb226821e96e0d0e 447 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M634_02400 c6c0209ac3514d5dbb226821e96e0d0e 447 SUPERFAMILY SSF52172 37 185 3.47E-10 T 12-10-2018 IPR011006 CheY-like superfamily M634_02400 c6c0209ac3514d5dbb226821e96e0d0e 447 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site M634_02170 880a28f8f2af51f6ee6a2a24d1198327 494 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 367 2.3E-125 T 12-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 M634_02170 880a28f8f2af51f6ee6a2a24d1198327 494 SUPERFAMILY SSF48179 210 341 1.34E-39 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 M634_02170 880a28f8f2af51f6ee6a2a24d1198327 494 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 22 488 36.888 T 12-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 M634_02170 880a28f8f2af51f6ee6a2a24d1198327 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 355 485 1.6E-16 T 12-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 M634_02170 880a28f8f2af51f6ee6a2a24d1198327 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 341 5.7E-26 T 12-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 M634_02170 880a28f8f2af51f6ee6a2a24d1198327 494 Gene3D G3DSA:1.10.1040.10 209 494 6.8E-121 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 M634_02170 880a28f8f2af51f6ee6a2a24d1198327 494 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 1.3E-59 T 12-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 M634_02170 880a28f8f2af51f6ee6a2a24d1198327 494 SUPERFAMILY SSF51735 31 209 1.82E-57 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_02170 880a28f8f2af51f6ee6a2a24d1198327 494 Gene3D G3DSA:3.40.50.720 1 208 2.5E-86 T 12-10-2018 M634_02170 880a28f8f2af51f6ee6a2a24d1198327 494 SUPERFAMILY SSF48179 348 487 3.4E-42 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 M634_24695 5cd3a666ad27789b97f18fe6bb73f150 420 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 329 338 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M634_24695 5cd3a666ad27789b97f18fe6bb73f150 420 Gene3D G3DSA:3.40.50.12240 2 420 2.8E-91 T 12-10-2018 M634_24695 5cd3a666ad27789b97f18fe6bb73f150 420 SUPERFAMILY SSF52540 82 344 4.43E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_24695 5cd3a666ad27789b97f18fe6bb73f150 420 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 135 338 3.3E-44 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M634_24695 5cd3a666ad27789b97f18fe6bb73f150 420 SMART SM00382 145 323 3.6E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_04600 f69b4b4528e6b858f3775fc1966f2791 327 Gene3D G3DSA:3.20.20.300 1 327 7.0E-125 T 12-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 M634_04600 f69b4b4528e6b858f3775fc1966f2791 327 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 327 44.767 T 12-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 M634_04600 f69b4b4528e6b858f3775fc1966f2791 327 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 9 291 2.6E-84 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 M634_04600 f69b4b4528e6b858f3775fc1966f2791 327 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 229 246 - T 12-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 M634_04600 f69b4b4528e6b858f3775fc1966f2791 327 SUPERFAMILY SSF51445 2 287 2.95E-86 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M634_04755 5a27f4cc02da63a5171b3c35301b592f 432 SUPERFAMILY SSF47384 192 271 1.55E-18 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M634_04755 5a27f4cc02da63a5171b3c35301b592f 432 Gene3D G3DSA:1.10.287.130 202 272 2.7E-20 T 12-10-2018 M634_04755 5a27f4cc02da63a5171b3c35301b592f 432 Pfam PF00989 PAS fold 99 165 6.1E-8 T 12-10-2018 IPR013767 PAS fold GO:0006355 M634_04755 5a27f4cc02da63a5171b3c35301b592f 432 SUPERFAMILY SSF55874 261 427 6.42E-40 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_04755 5a27f4cc02da63a5171b3c35301b592f 432 SMART SM00091 98 166 3.4E-6 T 12-10-2018 IPR000014 PAS domain M634_04755 5a27f4cc02da63a5171b3c35301b592f 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 2.0E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_04755 5a27f4cc02da63a5171b3c35301b592f 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 2.0E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_04755 5a27f4cc02da63a5171b3c35301b592f 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 2.0E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_04755 5a27f4cc02da63a5171b3c35301b592f 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 2.0E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_04755 5a27f4cc02da63a5171b3c35301b592f 432 Gene3D G3DSA:3.30.450.20 85 201 5.2E-10 T 12-10-2018 M634_04755 5a27f4cc02da63a5171b3c35301b592f 432 SMART SM00388 205 272 1.7E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_04755 5a27f4cc02da63a5171b3c35301b592f 432 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 99 203 7.5E-6 T 12-10-2018 IPR000014 PAS domain M634_04755 5a27f4cc02da63a5171b3c35301b592f 432 SUPERFAMILY SSF55785 86 196 1.15E-11 T 12-10-2018 IPR035965 PAS domain superfamily M634_04755 5a27f4cc02da63a5171b3c35301b592f 432 Pfam PF11808 Domain of unknown function (DUF3329) 7 91 4.5E-31 T 12-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 M634_04755 5a27f4cc02da63a5171b3c35301b592f 432 SMART SM00387 317 429 1.2E-32 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_04755 5a27f4cc02da63a5171b3c35301b592f 432 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 271 4.2E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_04755 5a27f4cc02da63a5171b3c35301b592f 432 Gene3D G3DSA:3.30.565.10 281 429 1.2E-36 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_04755 5a27f4cc02da63a5171b3c35301b592f 432 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 424 8.0E-138 T 12-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 M634_04755 5a27f4cc02da63a5171b3c35301b592f 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 317 427 6.5E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_19925 24c7ae1e0a6a2c2890e485dd92cea6fa 802 SUPERFAMILY SSF49303 732 800 1.01E-7 T 12-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily M634_19925 24c7ae1e0a6a2c2890e485dd92cea6fa 802 Pfam PF00703 Glycosyl hydrolases family 2 214 286 1.9E-5 T 12-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 M634_19925 24c7ae1e0a6a2c2890e485dd92cea6fa 802 SUPERFAMILY SSF49785 3 187 5.39E-48 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily M634_19925 24c7ae1e0a6a2c2890e485dd92cea6fa 802 Gene3D G3DSA:2.60.120.260 3 190 8.2E-49 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily M634_19925 24c7ae1e0a6a2c2890e485dd92cea6fa 802 Gene3D G3DSA:3.20.20.80 283 629 1.2E-120 T 12-10-2018 M634_19925 24c7ae1e0a6a2c2890e485dd92cea6fa 802 SUPERFAMILY SSF49303 637 709 2.63E-5 T 12-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily M634_19925 24c7ae1e0a6a2c2890e485dd92cea6fa 802 SUPERFAMILY SSF51445 283 631 2.04E-101 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M634_19925 24c7ae1e0a6a2c2890e485dd92cea6fa 802 Gene3D G3DSA:2.60.40.10 191 282 5.7E-11 T 12-10-2018 IPR013783 Immunoglobulin-like fold M634_19925 24c7ae1e0a6a2c2890e485dd92cea6fa 802 SUPERFAMILY SSF49303 191 285 1.09E-15 T 12-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily M634_14315 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 Gene3D G3DSA:3.30.420.40 255 501 3.1E-93 T 12-10-2018 M634_14315 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 5 497 2.1E-226 T 12-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 M634_14315 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 PIRSF PIRSF000538 4 503 1.6E-177 T 12-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 M634_14315 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 SUPERFAMILY SSF53067 255 497 5.18E-85 T 12-10-2018 M634_14315 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 SUPERFAMILY SSF53067 5 256 3.05E-94 T 12-10-2018 M634_14315 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 Gene3D G3DSA:3.30.420.40 2 254 4.8E-113 T 12-10-2018 M634_14315 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 451 3.1E-60 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 M634_14315 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 363 383 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 M634_14315 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 253 5.4E-86 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 M634_14315 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 Hamap MF_00186 Glycerol kinase [glpK]. 4 498 58.326 T 12-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 M634_14315 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 136 148 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 M634_21615 a398b6c2b2407f2b89a5b7cbc9485c3c 284 Gene3D G3DSA:1.10.10.10 1 87 1.3E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_21615 a398b6c2b2407f2b89a5b7cbc9485c3c 284 Pfam PF03466 LysR substrate binding domain 114 277 4.6E-10 T 12-10-2018 IPR005119 LysR, substrate-binding M634_21615 a398b6c2b2407f2b89a5b7cbc9485c3c 284 Gene3D G3DSA:3.40.190.10 108 271 1.9E-19 T 12-10-2018 M634_21615 a398b6c2b2407f2b89a5b7cbc9485c3c 284 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 3.6E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_21615 a398b6c2b2407f2b89a5b7cbc9485c3c 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 5.6E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_21615 a398b6c2b2407f2b89a5b7cbc9485c3c 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 5.6E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_21615 a398b6c2b2407f2b89a5b7cbc9485c3c 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 5.6E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_21615 a398b6c2b2407f2b89a5b7cbc9485c3c 284 SUPERFAMILY SSF53850 104 276 1.77E-23 T 12-10-2018 M634_21615 a398b6c2b2407f2b89a5b7cbc9485c3c 284 SUPERFAMILY SSF46785 3 85 1.21E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_21615 a398b6c2b2407f2b89a5b7cbc9485c3c 284 Gene3D G3DSA:3.40.190.10 153 249 1.9E-19 T 12-10-2018 M634_16105 5b3bea13e1469a5809c151691efb0fc2 373 SUPERFAMILY SSF53383 9 371 1.6E-102 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_16105 5b3bea13e1469a5809c151691efb0fc2 373 PIRSF PIRSF000524 5 373 3.6E-110 T 12-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 M634_16105 5b3bea13e1469a5809c151691efb0fc2 373 Gene3D G3DSA:3.90.1150.10 9 371 9.6E-144 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M634_16105 5b3bea13e1469a5809c151691efb0fc2 373 Gene3D G3DSA:3.40.640.10 22 269 9.6E-144 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_16105 5b3bea13e1469a5809c151691efb0fc2 373 Pfam PF00266 Aminotransferase class-V 13 349 3.0E-38 T 12-10-2018 IPR000192 Aminotransferase class V domain M634_16105 5b3bea13e1469a5809c151691efb0fc2 373 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 209 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site M634_12840 1a97518ba91496216dddf01cb13dea86 111 Pfam PF00462 Glutaredoxin 16 80 4.4E-17 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 M634_12840 1a97518ba91496216dddf01cb13dea86 111 SUPERFAMILY SSF52833 1 104 3.67E-34 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M634_12840 1a97518ba91496216dddf01cb13dea86 111 PIRSF PIRSF005894 1 107 1.1E-51 T 12-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 M634_12840 1a97518ba91496216dddf01cb13dea86 111 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 6.7E-46 T 12-10-2018 IPR004480 Monothiol glutaredoxin-related M634_12840 1a97518ba91496216dddf01cb13dea86 111 Gene3D G3DSA:3.40.30.10 2 106 9.2E-31 T 12-10-2018 M634_19600 fc442c05bfced39dc0282cf0b8f74246 123 Gene3D G3DSA:3.10.180.10 12 122 9.1E-18 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M634_19600 fc442c05bfced39dc0282cf0b8f74246 123 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 116 9.8E-6 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain M634_19600 fc442c05bfced39dc0282cf0b8f74246 123 SUPERFAMILY SSF54593 12 120 5.09E-25 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M634_02980 3d818227f23cc6d17e20ccffb6bf683a 255 Pfam PF00535 Glycosyl transferase family 2 8 114 1.1E-16 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 M634_02980 3d818227f23cc6d17e20ccffb6bf683a 255 SUPERFAMILY SSF53448 3 144 7.03E-24 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M634_02980 3d818227f23cc6d17e20ccffb6bf683a 255 Gene3D G3DSA:3.90.550.10 2 215 8.4E-22 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M634_07240 8770d2df336de8cc33236981df215c11 204 Pfam PF07499 RuvA, C-terminal domain 160 203 2.0E-17 T 12-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 M634_07240 8770d2df336de8cc33236981df215c11 204 SMART SM00278 108 127 0.071 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 M634_07240 8770d2df336de8cc33236981df215c11 204 SMART SM00278 73 92 540.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 M634_07240 8770d2df336de8cc33236981df215c11 204 Gene3D G3DSA:2.40.50.140 1 65 5.9E-28 T 12-10-2018 M634_07240 8770d2df336de8cc33236981df215c11 204 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 203 4.0E-65 T 12-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 M634_07240 8770d2df336de8cc33236981df215c11 204 Pfam PF14520 Helix-hairpin-helix domain 72 130 4.6E-14 T 12-10-2018 M634_07240 8770d2df336de8cc33236981df215c11 204 SUPERFAMILY SSF46929 158 203 8.89E-13 T 12-10-2018 IPR036267 RuvA, C-terminal domain superfamily M634_07240 8770d2df336de8cc33236981df215c11 204 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 204 31.777 T 12-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 M634_07240 8770d2df336de8cc33236981df215c11 204 Pfam PF01330 RuvA N terminal domain 2 62 7.5E-21 T 12-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 M634_07240 8770d2df336de8cc33236981df215c11 204 Gene3D G3DSA:1.10.150.20 67 143 7.5E-26 T 12-10-2018 M634_07240 8770d2df336de8cc33236981df215c11 204 SUPERFAMILY SSF50249 2 63 4.17E-19 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_07240 8770d2df336de8cc33236981df215c11 204 Gene3D G3DSA:1.10.8.10 157 204 9.5E-25 T 12-10-2018 M634_07240 8770d2df336de8cc33236981df215c11 204 SUPERFAMILY SSF47781 66 136 2.06E-19 T 12-10-2018 IPR010994 RuvA domain 2-like M634_14960 2c92d25d695e5a255fc8ae12d692eb36 475 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 1.8E-35 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 M634_14960 2c92d25d695e5a255fc8ae12d692eb36 475 SUPERFAMILY SSF51905 3 337 2.67E-56 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_14960 2c92d25d695e5a255fc8ae12d692eb36 475 Gene3D G3DSA:3.50.50.60 9 332 2.6E-122 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_14960 2c92d25d695e5a255fc8ae12d692eb36 475 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 1.4E-64 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 M634_14960 2c92d25d695e5a255fc8ae12d692eb36 475 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 12-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 M634_14960 2c92d25d695e5a255fc8ae12d692eb36 475 Gene3D G3DSA:3.50.50.60 150 271 2.6E-122 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_14960 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 2.4E-68 T 12-10-2018 M634_14960 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 2.4E-68 T 12-10-2018 M634_14960 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 2.4E-68 T 12-10-2018 M634_14960 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 2.4E-68 T 12-10-2018 M634_14960 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 2.4E-68 T 12-10-2018 M634_14960 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 2.4E-68 T 12-10-2018 M634_14960 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 2.4E-68 T 12-10-2018 M634_14960 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 2.4E-68 T 12-10-2018 M634_14960 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 2.4E-68 T 12-10-2018 M634_14960 2c92d25d695e5a255fc8ae12d692eb36 475 Gene3D G3DSA:3.30.390.30 346 467 8.9E-45 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 M634_14960 2c92d25d695e5a255fc8ae12d692eb36 475 SUPERFAMILY SSF55424 343 466 1.17E-38 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 M634_14960 2c92d25d695e5a255fc8ae12d692eb36 475 PIRSF PIRSF000350 1 468 1.8E-82 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 M634_14960 2c92d25d695e5a255fc8ae12d692eb36 475 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 8 460 2.0E-150 T 12-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 M634_14960 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 7.9E-41 T 12-10-2018 M634_14960 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 7.9E-41 T 12-10-2018 M634_14960 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 7.9E-41 T 12-10-2018 M634_14960 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 7.9E-41 T 12-10-2018 M634_14960 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 7.9E-41 T 12-10-2018 M634_04250 b00c560b07999768fb93abc43075e0c4 1077 SUPERFAMILY SSF52440 1 127 3.74E-50 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily M634_04250 b00c560b07999768fb93abc43075e0c4 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 M634_04250 b00c560b07999768fb93abc43075e0c4 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 M634_04250 b00c560b07999768fb93abc43075e0c4 1077 Gene3D G3DSA:3.30.470.20 665 934 4.2E-124 T 12-10-2018 M634_04250 b00c560b07999768fb93abc43075e0c4 1077 Gene3D G3DSA:3.40.50.20 1 116 2.2E-50 T 12-10-2018 M634_04250 b00c560b07999768fb93abc43075e0c4 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 8.1E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M634_04250 b00c560b07999768fb93abc43075e0c4 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 8.1E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M634_04250 b00c560b07999768fb93abc43075e0c4 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 8.1E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M634_04250 b00c560b07999768fb93abc43075e0c4 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 8.1E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M634_04250 b00c560b07999768fb93abc43075e0c4 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 8.1E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M634_04250 b00c560b07999768fb93abc43075e0c4 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 8.1E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M634_04250 b00c560b07999768fb93abc43075e0c4 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 8.1E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M634_04250 b00c560b07999768fb93abc43075e0c4 1077 Gene3D G3DSA:3.40.50.1380 937 1072 5.4E-33 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily M634_04250 b00c560b07999768fb93abc43075e0c4 1077 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.373 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M634_04250 b00c560b07999768fb93abc43075e0c4 1077 SUPERFAMILY SSF48108 397 554 6.8E-52 T 12-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M634_04250 b00c560b07999768fb93abc43075e0c4 1077 SUPERFAMILY SSF56059 128 401 2.12E-108 T 12-10-2018 M634_04250 b00c560b07999768fb93abc43075e0c4 1077 Gene3D G3DSA:3.40.50.20 554 662 2.4E-49 T 12-10-2018 M634_04250 b00c560b07999768fb93abc43075e0c4 1077 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.102 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M634_04250 b00c560b07999768fb93abc43075e0c4 1077 Pfam PF02142 MGS-like domain 956 1041 8.5E-16 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain M634_04250 b00c560b07999768fb93abc43075e0c4 1077 SMART SM00851 955 1041 1.3E-25 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain M634_04250 b00c560b07999768fb93abc43075e0c4 1077 SUPERFAMILY SSF56059 673 932 4.95E-103 T 12-10-2018 M634_04250 b00c560b07999768fb93abc43075e0c4 1077 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1050 0.0 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M634_04250 b00c560b07999768fb93abc43075e0c4 1077 Gene3D G3DSA:3.30.470.20 119 403 3.7E-129 T 12-10-2018 M634_04250 b00c560b07999768fb93abc43075e0c4 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 M634_04250 b00c560b07999768fb93abc43075e0c4 1077 SMART SM01096 424 547 4.7E-76 T 12-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M634_04250 b00c560b07999768fb93abc43075e0c4 1077 SUPERFAMILY SSF52440 556 675 1.87E-49 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily M634_04250 b00c560b07999768fb93abc43075e0c4 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 874 2.1E-37 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 M634_04250 b00c560b07999768fb93abc43075e0c4 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.5E-72 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 M634_04250 b00c560b07999768fb93abc43075e0c4 1077 SUPERFAMILY SSF52335 937 1071 3.53E-34 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily M634_04250 b00c560b07999768fb93abc43075e0c4 1077 Gene3D G3DSA:1.10.1030.10 404 553 1.0E-52 T 12-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M634_04250 b00c560b07999768fb93abc43075e0c4 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 M634_04250 b00c560b07999768fb93abc43075e0c4 1077 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 3.9E-41 T 12-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M634_18690 f4e5b1c3b45b6458bd952512deeb7523 171 Gene3D G3DSA:3.40.630.30 2 158 2.9E-31 T 12-10-2018 M634_18690 f4e5b1c3b45b6458bd952512deeb7523 171 SUPERFAMILY SSF55729 3 169 3.48E-31 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_18690 f4e5b1c3b45b6458bd952512deeb7523 171 Pfam PF13302 Acetyltransferase (GNAT) domain 9 146 1.9E-19 T 12-10-2018 IPR000182 GNAT domain M634_16040 7b8adfbf18eb10a9cc1255836aa905cc 574 SUPERFAMILY SSF160246 3 145 4.18E-40 T 12-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily M634_16040 7b8adfbf18eb10a9cc1255836aa905cc 574 SUPERFAMILY SSF52540 181 558 2.27E-91 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_16040 7b8adfbf18eb10a9cc1255836aa905cc 574 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 42 148 1.0E-22 T 12-10-2018 IPR007831 General secretory system II, protein E, N-terminal M634_16040 7b8adfbf18eb10a9cc1255836aa905cc 574 Gene3D G3DSA:3.40.50.300 290 565 9.0E-101 T 12-10-2018 M634_16040 7b8adfbf18eb10a9cc1255836aa905cc 574 Pfam PF00437 Type II/IV secretion system protein 189 453 3.6E-77 T 12-10-2018 IPR001482 Type II/IV secretion system protein M634_16040 7b8adfbf18eb10a9cc1255836aa905cc 574 Gene3D G3DSA:3.30.450.90 147 286 2.0E-43 T 12-10-2018 M634_16040 7b8adfbf18eb10a9cc1255836aa905cc 574 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 381 395 - T 12-10-2018 IPR001482 Type II/IV secretion system protein M634_16040 7b8adfbf18eb10a9cc1255836aa905cc 574 Gene3D G3DSA:3.30.300.160 63 145 1.2E-5 T 12-10-2018 M634_16040 7b8adfbf18eb10a9cc1255836aa905cc 574 SMART SM00382 314 435 5.3E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_04645 998e3ce92a5783fafa54d92a9d593672 182 Pfam PF01931 Protein of unknown function DUF84 14 172 5.6E-58 T 12-10-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 M634_04645 998e3ce92a5783fafa54d92a9d593672 182 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 13 176 2.8E-45 T 12-10-2018 IPR002786 Non-canonical purine NTP phosphatase M634_04645 998e3ce92a5783fafa54d92a9d593672 182 Hamap MF_00648 Non-canonical purine NTP phosphatase. 9 178 29.786 T 12-10-2018 IPR002786 Non-canonical purine NTP phosphatase M634_04645 998e3ce92a5783fafa54d92a9d593672 182 SUPERFAMILY SSF52972 9 178 4.36E-60 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like M634_04645 998e3ce92a5783fafa54d92a9d593672 182 Gene3D G3DSA:3.90.950.10 2 181 4.0E-69 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like M634_12010 44a3998cb4b3543944636cc2af06b96d 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 2.1E-13 T 12-10-2018 M634_12010 44a3998cb4b3543944636cc2af06b96d 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 2.1E-13 T 12-10-2018 M634_12010 44a3998cb4b3543944636cc2af06b96d 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 2.1E-13 T 12-10-2018 M634_12010 44a3998cb4b3543944636cc2af06b96d 196 PRINTS PR00097 Anthranilate synthase component II signature 4 18 1.9E-34 T 12-10-2018 M634_12010 44a3998cb4b3543944636cc2af06b96d 196 PRINTS PR00097 Anthranilate synthase component II signature 79 90 1.9E-34 T 12-10-2018 M634_12010 44a3998cb4b3543944636cc2af06b96d 196 PRINTS PR00097 Anthranilate synthase component II signature 166 179 1.9E-34 T 12-10-2018 M634_12010 44a3998cb4b3543944636cc2af06b96d 196 PRINTS PR00097 Anthranilate synthase component II signature 124 136 1.9E-34 T 12-10-2018 M634_12010 44a3998cb4b3543944636cc2af06b96d 196 PRINTS PR00097 Anthranilate synthase component II signature 104 112 1.9E-34 T 12-10-2018 M634_12010 44a3998cb4b3543944636cc2af06b96d 196 PRINTS PR00097 Anthranilate synthase component II signature 52 61 1.9E-34 T 12-10-2018 M634_12010 44a3998cb4b3543944636cc2af06b96d 196 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 1.2E-5 T 12-10-2018 M634_12010 44a3998cb4b3543944636cc2af06b96d 196 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 1.2E-5 T 12-10-2018 M634_12010 44a3998cb4b3543944636cc2af06b96d 196 Pfam PF00117 Glutamine amidotransferase class-I 6 186 1.3E-46 T 12-10-2018 IPR017926 Glutamine amidotransferase M634_12010 44a3998cb4b3543944636cc2af06b96d 196 SUPERFAMILY SSF52317 3 192 1.58E-47 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M634_12010 44a3998cb4b3543944636cc2af06b96d 196 Gene3D G3DSA:3.40.50.880 1 193 8.5E-59 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M634_12010 44a3998cb4b3543944636cc2af06b96d 196 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 188 1.2E-54 T 12-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 M634_14380 d3a68bcb5082166142c51f420b726dde 350 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 6 178 1.5E-66 T 12-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 M634_14380 d3a68bcb5082166142c51f420b726dde 350 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 186 349 8.8E-66 T 12-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 M634_14380 d3a68bcb5082166142c51f420b726dde 350 SUPERFAMILY SSF54197 181 348 5.95E-56 T 12-10-2018 IPR036265 HIT-like superfamily M634_14380 d3a68bcb5082166142c51f420b726dde 350 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 153 170 - T 12-10-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 M634_14380 d3a68bcb5082166142c51f420b726dde 350 SUPERFAMILY SSF54197 6 179 2.26E-72 T 12-10-2018 IPR036265 HIT-like superfamily M634_14380 d3a68bcb5082166142c51f420b726dde 350 PIRSF PIRSF000808 2 345 1.8E-125 T 12-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 M634_14380 d3a68bcb5082166142c51f420b726dde 350 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 4 349 5.9E-186 T 12-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 M634_14380 d3a68bcb5082166142c51f420b726dde 350 Gene3D G3DSA:3.30.428.10 46 177 9.4E-55 T 12-10-2018 IPR036265 HIT-like superfamily M634_14380 d3a68bcb5082166142c51f420b726dde 350 Gene3D G3DSA:3.30.428.10 178 350 1.1E-73 T 12-10-2018 IPR036265 HIT-like superfamily M634_07270 bd8fedddb1f5b9b93a25268b4776dc63 139 PIRSF PIRSF003230 2 138 4.2E-47 T 12-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 M634_07270 bd8fedddb1f5b9b93a25268b4776dc63 139 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 8 131 7.0E-50 T 12-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 M634_07270 bd8fedddb1f5b9b93a25268b4776dc63 139 Gene3D G3DSA:3.10.129.10 2 138 4.2E-42 T 12-10-2018 M634_07270 bd8fedddb1f5b9b93a25268b4776dc63 139 SUPERFAMILY SSF54637 5 132 5.32E-42 T 12-10-2018 IPR029069 HotDog domain superfamily M634_07270 bd8fedddb1f5b9b93a25268b4776dc63 139 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 12 127 1.3E-37 T 12-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 M634_07270 bd8fedddb1f5b9b93a25268b4776dc63 139 Pfam PF03061 Thioesterase superfamily 22 106 6.9E-18 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 M634_04960 f6f5f9c30adf03e1bd85e7665dcb68f9 74 SUPERFAMILY SSF161187 3 70 1.31E-26 T 12-10-2018 M634_04960 f6f5f9c30adf03e1bd85e7665dcb68f9 74 Pfam PF07191 zinc-ribbons 5 68 5.4E-27 T 12-10-2018 IPR010807 Protein of unknown function DUF1407 M634_04960 f6f5f9c30adf03e1bd85e7665dcb68f9 74 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 6 68 2.0E-31 T 12-10-2018 IPR010807 Protein of unknown function DUF1407 M634_04960 f6f5f9c30adf03e1bd85e7665dcb68f9 74 Gene3D G3DSA:2.10.290.10 2 71 8.8E-27 T 12-10-2018 IPR029037 YfgJ-like M634_14755 b5449d876a7c84697062bb6ffc8407b9 113 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 113 1.1E-36 T 12-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 M634_14755 b5449d876a7c84697062bb6ffc8407b9 113 Pfam PF01521 Iron-sulphur cluster biosynthesis 8 108 1.2E-18 T 12-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 M634_14755 b5449d876a7c84697062bb6ffc8407b9 113 Gene3D G3DSA:2.60.300.12 7 113 3.2E-32 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 M634_14755 b5449d876a7c84697062bb6ffc8407b9 113 SUPERFAMILY SSF89360 8 102 1.16E-29 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 M634_14755 b5449d876a7c84697062bb6ffc8407b9 113 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 113 35.874 T 12-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 M634_14755 b5449d876a7c84697062bb6ffc8407b9 113 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 94 111 - T 12-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 M634_09925 11399457b0d8c78ca02c3e24efe541f6 343 Gene3D G3DSA:3.40.50.2300 21 162 4.5E-30 T 12-10-2018 M634_09925 11399457b0d8c78ca02c3e24efe541f6 343 SUPERFAMILY SSF103039 162 341 1.57E-30 T 12-10-2018 IPR028976 CheC-like superfamily M634_09925 11399457b0d8c78ca02c3e24efe541f6 343 SMART SM00448 21 133 1.1E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_09925 11399457b0d8c78ca02c3e24efe541f6 343 Gene3D G3DSA:3.40.1550.10 163 341 8.9E-24 T 12-10-2018 IPR028976 CheC-like superfamily M634_09925 11399457b0d8c78ca02c3e24efe541f6 343 Pfam PF00072 Response regulator receiver domain 23 130 5.6E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_09925 11399457b0d8c78ca02c3e24efe541f6 343 SUPERFAMILY SSF52172 19 145 1.99E-30 T 12-10-2018 IPR011006 CheY-like superfamily M634_08955 79169b73f481a4b8ce7f6de52b069452 482 SMART SM01350 179 469 5.6E-215 T 12-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 M634_08955 79169b73f481a4b8ce7f6de52b069452 482 SUPERFAMILY SSF51735 4 174 6.37E-56 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_08955 79169b73f481a4b8ce7f6de52b069452 482 Gene3D G3DSA:3.40.50.720 1 180 2.1E-56 T 12-10-2018 M634_08955 79169b73f481a4b8ce7f6de52b069452 482 Gene3D G3DSA:1.20.5.320 435 482 3.5E-25 T 12-10-2018 M634_08955 79169b73f481a4b8ce7f6de52b069452 482 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 468 2.4E-126 T 12-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 M634_08955 79169b73f481a4b8ce7f6de52b069452 482 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 12-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 M634_08955 79169b73f481a4b8ce7f6de52b069452 482 PIRSF PIRSF000109 1 477 1.3E-241 T 12-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 M634_08955 79169b73f481a4b8ce7f6de52b069452 482 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 4 469 1.5E-234 T 12-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 M634_08955 79169b73f481a4b8ce7f6de52b069452 482 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 169 5.6E-51 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 M634_08955 79169b73f481a4b8ce7f6de52b069452 482 SUPERFAMILY SSF48179 177 472 6.8E-127 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 M634_08955 79169b73f481a4b8ce7f6de52b069452 482 Gene3D G3DSA:1.10.1040.10 181 434 4.6E-103 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 M634_08955 79169b73f481a4b8ce7f6de52b069452 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 3.5E-85 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 M634_08955 79169b73f481a4b8ce7f6de52b069452 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 3.5E-85 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 M634_08955 79169b73f481a4b8ce7f6de52b069452 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 3.5E-85 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 M634_08955 79169b73f481a4b8ce7f6de52b069452 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 3.5E-85 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 M634_08955 79169b73f481a4b8ce7f6de52b069452 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 3 26 3.5E-85 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 M634_08955 79169b73f481a4b8ce7f6de52b069452 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 3.5E-85 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 M634_16385 4730aea7bab916b8ff0f45494dfd431d 94 Gene3D G3DSA:1.20.120.350 15 93 5.5E-14 T 12-10-2018 IPR027359 Voltage-dependent channel domain superfamily M634_16385 4730aea7bab916b8ff0f45494dfd431d 94 SUPERFAMILY SSF81324 24 92 8.63E-10 T 12-10-2018 M634_20885 c9db1f5e8a109c975df34939fedd9338 182 SUPERFAMILY SSF51161 3 180 1.08E-50 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily M634_20885 c9db1f5e8a109c975df34939fedd9338 182 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 127 162 2.3E-11 T 12-10-2018 IPR001451 Hexapeptide repeat M634_20885 c9db1f5e8a109c975df34939fedd9338 182 SMART SM01266 4 56 4.6E-7 T 12-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 M634_20885 c9db1f5e8a109c975df34939fedd9338 182 Pfam PF12464 Maltose acetyltransferase 6 50 3.3E-8 T 12-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 M634_20885 c9db1f5e8a109c975df34939fedd9338 182 Gene3D G3DSA:2.160.10.10 1 182 2.5E-64 T 12-10-2018 M634_20885 c9db1f5e8a109c975df34939fedd9338 182 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 136 164 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 M634_21350 e9caf01a5b2d13b54a3a4e85dc1ebf13 375 SMART SM00028 191 224 79.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_21350 e9caf01a5b2d13b54a3a4e85dc1ebf13 375 SMART SM00028 259 292 89.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_21350 e9caf01a5b2d13b54a3a4e85dc1ebf13 375 SMART SM00028 225 258 0.0023 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_21350 e9caf01a5b2d13b54a3a4e85dc1ebf13 375 SUPERFAMILY SSF48371 89 231 2.3E-8 T 12-10-2018 IPR016024 Armadillo-type fold M634_21350 e9caf01a5b2d13b54a3a4e85dc1ebf13 375 Gene3D G3DSA:1.25.40.10 172 326 9.5E-21 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_21350 e9caf01a5b2d13b54a3a4e85dc1ebf13 375 Pfam PF14559 Tetratricopeptide repeat 206 262 3.5E-8 T 12-10-2018 M634_21350 e9caf01a5b2d13b54a3a4e85dc1ebf13 375 SUPERFAMILY SSF48452 195 329 6.41E-20 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_17880 d4817a68e5a5c5d072b434e74753e451 522 Gene3D G3DSA:3.50.50.60 213 510 2.0E-105 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_17880 d4817a68e5a5c5d072b434e74753e451 522 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 520 6.6E-248 T 12-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 M634_17880 d4817a68e5a5c5d072b434e74753e451 522 SUPERFAMILY SSF52833 104 197 1.08E-23 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M634_17880 d4817a68e5a5c5d072b434e74753e451 522 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 346 366 - T 12-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 M634_17880 d4817a68e5a5c5d072b434e74753e451 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 215 234 2.3E-35 T 12-10-2018 M634_17880 d4817a68e5a5c5d072b434e74753e451 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 316 334 2.3E-35 T 12-10-2018 M634_17880 d4817a68e5a5c5d072b434e74753e451 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 443 459 2.3E-35 T 12-10-2018 M634_17880 d4817a68e5a5c5d072b434e74753e451 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 358 376 2.3E-35 T 12-10-2018 M634_17880 d4817a68e5a5c5d072b434e74753e451 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 470 492 2.3E-35 T 12-10-2018 M634_17880 d4817a68e5a5c5d072b434e74753e451 522 SUPERFAMILY SSF51905 203 516 2.72E-49 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_17880 d4817a68e5a5c5d072b434e74753e451 522 Pfam PF13192 Thioredoxin domain 120 194 2.6E-12 T 12-10-2018 IPR012336 Thioredoxin-like fold M634_17880 d4817a68e5a5c5d072b434e74753e451 522 Gene3D G3DSA:3.40.30.80 1 200 7.1E-65 T 12-10-2018 M634_17880 d4817a68e5a5c5d072b434e74753e451 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 317 325 5.4E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 M634_17880 d4817a68e5a5c5d072b434e74753e451 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 354 378 5.4E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 M634_17880 d4817a68e5a5c5d072b434e74753e451 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 406 422 5.4E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 M634_17880 d4817a68e5a5c5d072b434e74753e451 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 214 236 5.4E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 M634_17880 d4817a68e5a5c5d072b434e74753e451 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 480 498 5.4E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 M634_17880 d4817a68e5a5c5d072b434e74753e451 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 339 351 5.4E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 M634_17880 d4817a68e5a5c5d072b434e74753e451 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 445 466 5.4E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 M634_17880 d4817a68e5a5c5d072b434e74753e451 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 246 261 5.4E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 M634_17880 d4817a68e5a5c5d072b434e74753e451 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 276 5.4E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 M634_17880 d4817a68e5a5c5d072b434e74753e451 522 SUPERFAMILY SSF52833 1 101 2.91E-26 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M634_17880 d4817a68e5a5c5d072b434e74753e451 522 PIRSF PIRSF000238 1 522 1.8E-254 T 12-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 M634_17880 d4817a68e5a5c5d072b434e74753e451 522 Gene3D G3DSA:3.50.50.60 328 451 2.0E-105 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_17880 d4817a68e5a5c5d072b434e74753e451 522 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 213 506 1.3E-41 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 M634_00940 96cc1b4671b1a977f875e9f6e96483d7 521 Gene3D G3DSA:3.40.50.300 3 280 8.8E-65 T 12-10-2018 M634_00940 96cc1b4671b1a977f875e9f6e96483d7 521 SUPERFAMILY SSF52540 333 507 2.24E-37 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_00940 96cc1b4671b1a977f875e9f6e96483d7 521 SUPERFAMILY SSF52540 3 246 2.4E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_00940 96cc1b4671b1a977f875e9f6e96483d7 521 SMART SM00382 345 512 4.2E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_00940 96cc1b4671b1a977f875e9f6e96483d7 521 SMART SM00382 28 233 3.7E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_00940 96cc1b4671b1a977f875e9f6e96483d7 521 ProSitePatterns PS00211 ABC transporters family signature. 438 452 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_00940 96cc1b4671b1a977f875e9f6e96483d7 521 Pfam PF00005 ABC transporter 22 188 7.4E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_00940 96cc1b4671b1a977f875e9f6e96483d7 521 Pfam PF00005 ABC transporter 337 465 3.3E-19 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_00940 96cc1b4671b1a977f875e9f6e96483d7 521 Pfam PF12848 ABC transporter 228 304 7.2E-18 T 12-10-2018 IPR032781 ABC-transporter extension domain M634_00940 96cc1b4671b1a977f875e9f6e96483d7 521 Gene3D G3DSA:3.40.50.300 285 518 2.3E-43 T 12-10-2018 M634_15330 57f19131521f0484776a666f3b9aad79 322 Gene3D G3DSA:3.30.70.1630 26 187 6.0E-40 T 12-10-2018 M634_15330 57f19131521f0484776a666f3b9aad79 322 Gene3D G3DSA:2.40.30.160 190 310 3.1E-34 T 12-10-2018 M634_15330 57f19131521f0484776a666f3b9aad79 322 SUPERFAMILY SSF103025 12 236 3.61E-56 T 12-10-2018 M634_15330 57f19131521f0484776a666f3b9aad79 322 Gene3D G3DSA:3.30.70.1400 29 115 6.0E-40 T 12-10-2018 M634_15330 57f19131521f0484776a666f3b9aad79 322 Pfam PF01571 Aminomethyltransferase folate-binding domain 28 183 3.5E-7 T 12-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain M634_15330 57f19131521f0484776a666f3b9aad79 322 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 181 245 3.8E-25 T 12-10-2018 IPR017703 YgfZ/GcvT conserved site M634_15330 57f19131521f0484776a666f3b9aad79 322 SUPERFAMILY SSF101790 237 320 4.05E-21 T 12-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal M634_15330 57f19131521f0484776a666f3b9aad79 322 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 316 44.195 T 12-10-2018 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 M634_17830 ba6c64e27a8d12bae57cf8aa000bd7a0 567 Hamap MF_00520 Ribulokinase [araB]. 8 564 44.935 T 12-10-2018 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 M634_17830 ba6c64e27a8d12bae57cf8aa000bd7a0 567 Gene3D G3DSA:3.30.420.460 342 542 1.9E-119 T 12-10-2018 M634_17830 ba6c64e27a8d12bae57cf8aa000bd7a0 567 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 297 507 3.8E-34 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 M634_17830 ba6c64e27a8d12bae57cf8aa000bd7a0 567 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 11 287 3.8E-17 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 M634_17830 ba6c64e27a8d12bae57cf8aa000bd7a0 567 SUPERFAMILY SSF53067 292 554 5.83E-47 T 12-10-2018 M634_17830 ba6c64e27a8d12bae57cf8aa000bd7a0 567 Gene3D G3DSA:3.30.420.40 11 532 1.9E-119 T 12-10-2018 M634_17830 ba6c64e27a8d12bae57cf8aa000bd7a0 567 SUPERFAMILY SSF53067 10 290 4.73E-26 T 12-10-2018 M634_17830 ba6c64e27a8d12bae57cf8aa000bd7a0 567 PIRSF PIRSF000538 8 561 5.1E-49 T 12-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 M634_17830 ba6c64e27a8d12bae57cf8aa000bd7a0 567 TIGRFAM TIGR01234 L-ribulokinase: ribulokinase 10 554 9.9E-186 T 12-10-2018 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 M634_02750 a25e33b055452419a67be1817af40c29 773 Gene3D G3DSA:1.10.3500.10 112 498 8.9E-158 T 12-10-2018 IPR023323 Tex-like domain superfamily M634_02750 a25e33b055452419a67be1817af40c29 773 SMART SM00732 326 424 2.5E-38 T 12-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 M634_02750 a25e33b055452419a67be1817af40c29 773 Pfam PF00575 S1 RNA binding domain 649 720 7.4E-21 T 12-10-2018 IPR003029 S1 domain GO:0003676 M634_02750 a25e33b055452419a67be1817af40c29 773 Gene3D G3DSA:1.10.10.650 2 109 4.0E-42 T 12-10-2018 IPR023319 Tex-like protein, HTH domain superfamily M634_02750 a25e33b055452419a67be1817af40c29 773 Pfam PF09371 Tex-like protein N-terminal domain 9 192 8.9E-72 T 12-10-2018 IPR018974 Tex-like protein, N-terminal M634_02750 a25e33b055452419a67be1817af40c29 773 Pfam PF16921 Tex protein YqgF-like domain 327 451 8.9E-56 T 12-10-2018 IPR032639 Tex protein, YqgF-like domain M634_02750 a25e33b055452419a67be1817af40c29 773 SUPERFAMILY SSF158832 3 321 9.94E-121 T 12-10-2018 M634_02750 a25e33b055452419a67be1817af40c29 773 Gene3D G3DSA:2.40.50.140 631 725 7.6E-29 T 12-10-2018 M634_02750 a25e33b055452419a67be1817af40c29 773 Gene3D G3DSA:3.30.420.140 325 451 8.9E-158 T 12-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 M634_02750 a25e33b055452419a67be1817af40c29 773 SMART SM00316 649 720 1.2E-24 T 12-10-2018 IPR022967 RNA-binding domain, S1 M634_02750 a25e33b055452419a67be1817af40c29 773 SUPERFAMILY SSF47781 470 557 1.45E-26 T 12-10-2018 IPR010994 RuvA domain 2-like M634_02750 a25e33b055452419a67be1817af40c29 773 SUPERFAMILY SSF47781 560 632 3.78E-19 T 12-10-2018 IPR010994 RuvA domain 2-like M634_02750 a25e33b055452419a67be1817af40c29 773 Gene3D G3DSA:1.10.150.310 499 630 5.8E-50 T 12-10-2018 M634_02750 a25e33b055452419a67be1817af40c29 773 SUPERFAMILY SSF53098 322 469 5.92E-51 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M634_02750 a25e33b055452419a67be1817af40c29 773 SUPERFAMILY SSF50249 638 723 4.1E-24 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_02750 a25e33b055452419a67be1817af40c29 773 Pfam PF12836 Helix-hairpin-helix motif 491 555 2.8E-27 T 12-10-2018 M634_23595 14339fe340df635531ed1d4b960b6754 328 Gene3D G3DSA:3.40.50.300 2 197 1.7E-45 T 12-10-2018 M634_23595 14339fe340df635531ed1d4b960b6754 328 SMART SM00833 241 324 5.8E-4 T 12-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal M634_23595 14339fe340df635531ed1d4b960b6754 328 SUPERFAMILY SSF52540 4 171 2.07E-27 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_23595 14339fe340df635531ed1d4b960b6754 328 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 176 3.6E-42 T 12-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain M634_14995 bc60814908d9a129926a500f7640b637 561 Gene3D G3DSA:3.30.300.160 63 140 3.4E-8 T 12-10-2018 M634_14995 bc60814908d9a129926a500f7640b637 561 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 38 141 1.0E-16 T 12-10-2018 IPR007831 General secretory system II, protein E, N-terminal M634_14995 bc60814908d9a129926a500f7640b637 561 Gene3D G3DSA:3.30.450.90 151 288 1.8E-46 T 12-10-2018 M634_14995 bc60814908d9a129926a500f7640b637 561 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 5 558 7.0E-237 T 12-10-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 M634_14995 bc60814908d9a129926a500f7640b637 561 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 383 397 - T 12-10-2018 IPR001482 Type II/IV secretion system protein M634_14995 bc60814908d9a129926a500f7640b637 561 SUPERFAMILY SSF160246 1 140 3.14E-32 T 12-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily M634_14995 bc60814908d9a129926a500f7640b637 561 SUPERFAMILY SSF52540 173 558 6.98E-92 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_14995 bc60814908d9a129926a500f7640b637 561 Gene3D G3DSA:3.40.50.300 290 560 6.5E-104 T 12-10-2018 M634_14995 bc60814908d9a129926a500f7640b637 561 Pfam PF00437 Type II/IV secretion system protein 188 455 1.1E-87 T 12-10-2018 IPR001482 Type II/IV secretion system protein M634_19700 a8cc46fbfda8a8f79cb48bc6fda02b2b 217 Pfam PF00857 Isochorismatase family 10 208 3.9E-35 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 M634_19700 a8cc46fbfda8a8f79cb48bc6fda02b2b 217 Gene3D G3DSA:3.40.50.850 7 212 2.3E-36 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 M634_19700 a8cc46fbfda8a8f79cb48bc6fda02b2b 217 SUPERFAMILY SSF52499 4 213 7.06E-27 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 M634_03800 ae18df500dc86b92739baf7bcef3cc3c 799 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 271 797 8.5E-140 T 12-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 M634_03800 ae18df500dc86b92739baf7bcef3cc3c 799 SUPERFAMILY SSF53062 1 127 4.45E-33 T 12-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 M634_03800 ae18df500dc86b92739baf7bcef3cc3c 799 Pfam PF00381 PTS HPr component phosphorylation site 158 234 2.1E-17 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like M634_03800 ae18df500dc86b92739baf7bcef3cc3c 799 PRINTS PR00107 Phosphocarrier protein signature 166 182 8.9E-8 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like M634_03800 ae18df500dc86b92739baf7bcef3cc3c 799 PRINTS PR00107 Phosphocarrier protein signature 206 223 8.9E-8 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like M634_03800 ae18df500dc86b92739baf7bcef3cc3c 799 PRINTS PR00107 Phosphocarrier protein signature 191 206 8.9E-8 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like M634_03800 ae18df500dc86b92739baf7bcef3cc3c 799 Gene3D G3DSA:3.50.30.10 273 491 7.5E-61 T 12-10-2018 M634_03800 ae18df500dc86b92739baf7bcef3cc3c 799 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 158 232 2.4E-16 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like M634_03800 ae18df500dc86b92739baf7bcef3cc3c 799 SUPERFAMILY SSF52009 384 504 2.62E-31 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 M634_03800 ae18df500dc86b92739baf7bcef3cc3c 799 Pfam PF00391 PEP-utilising enzyme, mobile domain 410 483 1.4E-22 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 M634_03800 ae18df500dc86b92739baf7bcef3cc3c 799 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 551 570 1.0E-23 T 12-10-2018 M634_03800 ae18df500dc86b92739baf7bcef3cc3c 799 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 702 717 1.0E-23 T 12-10-2018 M634_03800 ae18df500dc86b92739baf7bcef3cc3c 799 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 755 767 1.0E-23 T 12-10-2018 M634_03800 ae18df500dc86b92739baf7bcef3cc3c 799 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 719 734 1.0E-23 T 12-10-2018 M634_03800 ae18df500dc86b92739baf7bcef3cc3c 799 SUPERFAMILY SSF51621 514 797 2.07E-97 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 M634_03800 ae18df500dc86b92739baf7bcef3cc3c 799 Gene3D G3DSA:3.30.1340.10 155 241 5.6E-21 T 12-10-2018 IPR035895 HPr-like superfamily M634_03800 ae18df500dc86b92739baf7bcef3cc3c 799 SUPERFAMILY SSF55594 157 240 6.02E-20 T 12-10-2018 IPR035895 HPr-like superfamily M634_03800 ae18df500dc86b92739baf7bcef3cc3c 799 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 514 796 4.0E-98 T 12-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 M634_03800 ae18df500dc86b92739baf7bcef3cc3c 799 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 166 173 - T 12-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site M634_03800 ae18df500dc86b92739baf7bcef3cc3c 799 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 442 453 - T 12-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 M634_03800 ae18df500dc86b92739baf7bcef3cc3c 799 Gene3D G3DSA:3.20.20.60 492 799 2.9E-109 T 12-10-2018 M634_03800 ae18df500dc86b92739baf7bcef3cc3c 799 TIGRFAM TIGR02364 dha_pts: dihydroxyacetone kinase, phosphotransfer subunit 2 126 9.2E-37 T 12-10-2018 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain M634_03800 ae18df500dc86b92739baf7bcef3cc3c 799 Gene3D G3DSA:3.40.50.510 1 130 1.3E-42 T 12-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 M634_03800 ae18df500dc86b92739baf7bcef3cc3c 799 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 702 720 - T 12-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 M634_03800 ae18df500dc86b92739baf7bcef3cc3c 799 SUPERFAMILY SSF47831 296 402 9.81E-23 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 M634_03800 ae18df500dc86b92739baf7bcef3cc3c 799 Gene3D G3DSA:1.10.274.10 290 405 7.5E-61 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 M634_03800 ae18df500dc86b92739baf7bcef3cc3c 799 Pfam PF05524 PEP-utilising enzyme, N-terminal 273 385 2.6E-22 T 12-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 M634_03800 ae18df500dc86b92739baf7bcef3cc3c 799 Pfam PF03610 PTS system fructose IIA component 3 113 9.7E-24 T 12-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 M634_09370 92fc96fe11fade9d8a23ad5e147bf3b8 306 Gene3D G3DSA:1.10.8.210 150 211 3.9E-10 T 12-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 M634_09370 92fc96fe11fade9d8a23ad5e147bf3b8 306 SUPERFAMILY SSF75615 109 208 3.79E-26 T 12-10-2018 M634_09370 92fc96fe11fade9d8a23ad5e147bf3b8 306 Gene3D G3DSA:3.40.50.720 1 113 1.3E-34 T 12-10-2018 M634_09370 92fc96fe11fade9d8a23ad5e147bf3b8 306 Gene3D G3DSA:3.30.160.110 114 149 1.6E-14 T 12-10-2018 M634_09370 92fc96fe11fade9d8a23ad5e147bf3b8 306 Pfam PF10414 Sirohaem synthase dimerisation region 151 199 3.2E-13 T 12-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 M634_09370 92fc96fe11fade9d8a23ad5e147bf3b8 306 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 200 4.5E-63 T 12-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 M634_09370 92fc96fe11fade9d8a23ad5e147bf3b8 306 Pfam PF14824 Sirohaem biosynthesis protein central 120 146 2.0E-7 T 12-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 M634_09370 92fc96fe11fade9d8a23ad5e147bf3b8 306 Pfam PF13241 Putative NAD(P)-binding 6 116 2.6E-31 T 12-10-2018 M634_09370 92fc96fe11fade9d8a23ad5e147bf3b8 306 SUPERFAMILY SSF51735 1 113 2.67E-27 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_04930 2a1c9cf936173486e5e299c939d694f9 372 PIRSF PIRSF004640 1 364 1.9E-147 T 12-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 M634_04930 2a1c9cf936173486e5e299c939d694f9 372 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 359 35.147 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 M634_04930 2a1c9cf936173486e5e299c939d694f9 372 SUPERFAMILY SSF56014 265 354 4.11E-11 T 12-10-2018 M634_04930 2a1c9cf936173486e5e299c939d694f9 372 Gene3D G3DSA:3.20.20.20 1 261 1.0E-104 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 M634_04930 2a1c9cf936173486e5e299c939d694f9 372 SUPERFAMILY SSF51717 15 208 7.3E-11 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 M634_04930 2a1c9cf936173486e5e299c939d694f9 372 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 351 7.6E-127 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 M634_04930 2a1c9cf936173486e5e299c939d694f9 372 Pfam PF04551 GcpE protein 14 354 2.9E-132 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 M634_04930 2a1c9cf936173486e5e299c939d694f9 372 Gene3D G3DSA:3.30.413.10 262 361 8.4E-25 T 12-10-2018 M634_12270 2128146264877489680f3cd3cc3d4de8 203 Pfam PF00034 Cytochrome c 133 201 2.0E-6 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_12270 2128146264877489680f3cd3cc3d4de8 203 Gene3D G3DSA:1.10.760.10 26 96 8.4E-18 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_12270 2128146264877489680f3cd3cc3d4de8 203 SUPERFAMILY SSF46626 27 96 3.75E-14 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_12270 2128146264877489680f3cd3cc3d4de8 203 Gene3D G3DSA:1.10.760.10 118 201 2.3E-23 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_12270 2128146264877489680f3cd3cc3d4de8 203 SUPERFAMILY SSF46626 120 201 2.62E-20 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_12270 2128146264877489680f3cd3cc3d4de8 203 PIRSF PIRSF000005 1 203 2.1E-62 T 12-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 M634_23655 6323e71b928aedff563903843a03d6df 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 208 227 4.9E-9 T 12-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 M634_23655 6323e71b928aedff563903843a03d6df 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 72 94 4.9E-9 T 12-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 M634_23655 6323e71b928aedff563903843a03d6df 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 176 194 4.9E-9 T 12-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 M634_23655 6323e71b928aedff563903843a03d6df 264 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 115 126 - T 12-10-2018 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 M634_23655 6323e71b928aedff563903843a03d6df 264 SUPERFAMILY SSF56534 3 235 4.06E-97 T 12-10-2018 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily M634_23655 6323e71b928aedff563903843a03d6df 264 Gene3D G3DSA:1.10.800.10 1 264 1.0E-95 T 12-10-2018 IPR036951 Aromatic amino acid hydroxylase superfamily GO:0004497|GO:0005506|GO:0009072|GO:0055114 M634_23655 6323e71b928aedff563903843a03d6df 264 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 13 229 7.1E-46 T 12-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 M634_23655 6323e71b928aedff563903843a03d6df 264 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 14 239 4.3E-96 T 12-10-2018 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|KEGG: 00790+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158 M634_21225 b2348000c3f36723dbc14646ffdcf041 151 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 150 3.0E-65 T 12-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 M634_21225 b2348000c3f36723dbc14646ffdcf041 151 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 73 - T 12-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 M634_21225 b2348000c3f36723dbc14646ffdcf041 151 Gene3D G3DSA:3.40.50.1380 1 151 2.4E-66 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily M634_21225 b2348000c3f36723dbc14646ffdcf041 151 SMART SM00851 25 118 3.2E-23 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain M634_21225 b2348000c3f36723dbc14646ffdcf041 151 Pfam PF02142 MGS-like domain 25 118 2.6E-18 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain M634_21225 b2348000c3f36723dbc14646ffdcf041 151 PIRSF PIRSF006614 8 151 4.8E-64 T 12-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 M634_21225 b2348000c3f36723dbc14646ffdcf041 151 SUPERFAMILY SSF52335 3 150 2.9E-58 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily M634_21225 b2348000c3f36723dbc14646ffdcf041 151 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 32.954 T 12-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 M634_03300 1dc3f83136094783a7b663c808a99eff 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 6.9E-25 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03300 1dc3f83136094783a7b663c808a99eff 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 6.9E-25 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03300 1dc3f83136094783a7b663c808a99eff 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 6.9E-25 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03300 1dc3f83136094783a7b663c808a99eff 92 Pfam PF00203 Ribosomal protein S19 3 83 1.9E-36 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03300 1dc3f83136094783a7b663c808a99eff 92 Gene3D G3DSA:3.30.860.10 1 92 6.4E-44 T 12-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03300 1dc3f83136094783a7b663c808a99eff 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 12-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03300 1dc3f83136094783a7b663c808a99eff 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.757 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03300 1dc3f83136094783a7b663c808a99eff 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.1E-46 T 12-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 M634_03300 1dc3f83136094783a7b663c808a99eff 92 SUPERFAMILY SSF54570 3 84 1.01E-35 T 12-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03300 1dc3f83136094783a7b663c808a99eff 92 PIRSF PIRSF002144 1 92 1.1E-31 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_06660 0775d1ef210870807a5859b4ca5914ae 264 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 19 260 2.2E-84 T 12-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 M634_06660 0775d1ef210870807a5859b4ca5914ae 264 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 13 260 33.831 T 12-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 M634_06660 0775d1ef210870807a5859b4ca5914ae 264 Pfam PF12697 Alpha/beta hydrolase family 21 252 2.3E-17 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 M634_06660 0775d1ef210870807a5859b4ca5914ae 264 SUPERFAMILY SSF53474 16 261 1.59E-41 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_06660 0775d1ef210870807a5859b4ca5914ae 264 Gene3D G3DSA:3.40.50.1820 10 261 2.0E-64 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_21195 47f566810dfe9d82466cfc9c69a6dad0 83 Gene3D G3DSA:1.20.1280.290 26 76 1.7E-6 T 12-10-2018 M634_21195 47f566810dfe9d82466cfc9c69a6dad0 83 Pfam PF10688 Bacterial inner membrane protein 4 73 2.8E-9 T 12-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV M634_21195 47f566810dfe9d82466cfc9c69a6dad0 83 ProDom PD058023 TRANSMEMBRANE SO1069 MEMBRANE VCA0743 SO4196 VVA0623 VPA0666 HI1736 PM0424 3 73 4.0E-33 T 12-10-2018 IPR020137 Uncharacterised protein family HI1736 M634_17645 b64c32753fc9f7cf65450e538ec0e6e7 398 Pfam PF08238 Sel1 repeat 79 97 0.037 T 12-10-2018 IPR006597 Sel1-like repeat M634_17645 b64c32753fc9f7cf65450e538ec0e6e7 398 Pfam PF08238 Sel1 repeat 191 206 11.0 T 12-10-2018 IPR006597 Sel1-like repeat M634_17645 b64c32753fc9f7cf65450e538ec0e6e7 398 Pfam PF08238 Sel1 repeat 147 169 3.4 T 12-10-2018 IPR006597 Sel1-like repeat M634_17645 b64c32753fc9f7cf65450e538ec0e6e7 398 Pfam PF08238 Sel1 repeat 212 242 6.2E-5 T 12-10-2018 IPR006597 Sel1-like repeat M634_17645 b64c32753fc9f7cf65450e538ec0e6e7 398 SUPERFAMILY SSF81901 78 281 3.23E-26 T 12-10-2018 M634_17645 b64c32753fc9f7cf65450e538ec0e6e7 398 SMART SM00671 207 242 0.001 T 12-10-2018 IPR006597 Sel1-like repeat M634_17645 b64c32753fc9f7cf65450e538ec0e6e7 398 SMART SM00671 171 206 14.0 T 12-10-2018 IPR006597 Sel1-like repeat M634_17645 b64c32753fc9f7cf65450e538ec0e6e7 398 SMART SM00671 243 276 120.0 T 12-10-2018 IPR006597 Sel1-like repeat M634_17645 b64c32753fc9f7cf65450e538ec0e6e7 398 SMART SM00671 135 170 11.0 T 12-10-2018 IPR006597 Sel1-like repeat M634_17645 b64c32753fc9f7cf65450e538ec0e6e7 398 SMART SM00671 67 97 310.0 T 12-10-2018 IPR006597 Sel1-like repeat M634_17645 b64c32753fc9f7cf65450e538ec0e6e7 398 Gene3D G3DSA:1.25.40.10 187 304 3.0E-16 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_17645 b64c32753fc9f7cf65450e538ec0e6e7 398 Gene3D G3DSA:1.25.40.10 22 186 4.4E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_07825 728da8880567154714ea8a32b721e06d 402 SUPERFAMILY SSF53383 22 388 1.16E-99 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_07825 728da8880567154714ea8a32b721e06d 402 Gene3D G3DSA:3.90.1150.10 256 390 1.7E-40 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M634_07825 728da8880567154714ea8a32b721e06d 402 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 7 389 1.8E-172 T 12-10-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 M634_07825 728da8880567154714ea8a32b721e06d 402 Gene3D G3DSA:3.40.640.10 3 255 2.0E-78 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_07825 728da8880567154714ea8a32b721e06d 402 PIRSF PIRSF001434 1 391 1.7E-125 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 M634_07825 728da8880567154714ea8a32b721e06d 402 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 387 4.5E-118 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 M634_07825 728da8880567154714ea8a32b721e06d 402 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 199 213 - T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 M634_23120 1fc75ec1b43a8d454a2caad59854e3bb 430 SUPERFAMILY SSF103088 311 426 1.96E-25 T 12-10-2018 IPR036737 OmpA-like domain superfamily M634_23120 1fc75ec1b43a8d454a2caad59854e3bb 430 TIGRFAM TIGR03350 type_VI_ompA: type VI secretion system peptidoglycan-associated domain 290 426 8.1E-45 T 12-10-2018 IPR017733 Type VI secretion system peptidoglycan-associated domain M634_23120 1fc75ec1b43a8d454a2caad59854e3bb 430 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 49 258 4.0E-67 T 12-10-2018 IPR017732 Type IV / VI secretion system, DotU M634_23120 1fc75ec1b43a8d454a2caad59854e3bb 430 Gene3D G3DSA:1.25.40.590 47 204 2.0E-48 T 12-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily M634_23120 1fc75ec1b43a8d454a2caad59854e3bb 430 Pfam PF09850 Type VI secretion system protein DotU 50 252 1.0E-55 T 12-10-2018 IPR017732 Type IV / VI secretion system, DotU M634_23120 1fc75ec1b43a8d454a2caad59854e3bb 430 Gene3D G3DSA:3.30.1330.60 278 428 7.7E-39 T 12-10-2018 IPR036737 OmpA-like domain superfamily M634_23120 1fc75ec1b43a8d454a2caad59854e3bb 430 Pfam PF00691 OmpA family 322 420 1.1E-14 T 12-10-2018 IPR006665 OmpA-like domain M634_19235 a336de5cc0e656d961f4ef8ec8ff04e3 184 Pfam PF12464 Maltose acetyltransferase 6 55 1.8E-11 T 12-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 M634_19235 a336de5cc0e656d961f4ef8ec8ff04e3 184 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 126 159 2.5E-9 T 12-10-2018 IPR001451 Hexapeptide repeat M634_19235 a336de5cc0e656d961f4ef8ec8ff04e3 184 SMART SM01266 4 56 1.1E-14 T 12-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 M634_19235 a336de5cc0e656d961f4ef8ec8ff04e3 184 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 135 163 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 M634_19235 a336de5cc0e656d961f4ef8ec8ff04e3 184 SUPERFAMILY SSF51161 2 183 8.59E-44 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily M634_19235 a336de5cc0e656d961f4ef8ec8ff04e3 184 Gene3D G3DSA:2.160.10.10 1 184 5.2E-64 T 12-10-2018 M634_07210 53eb24f77a962fec7abdaaa0fe2dc739 245 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 8 245 5.5E-118 T 12-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 M634_07210 53eb24f77a962fec7abdaaa0fe2dc739 245 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 6 245 43.193 T 12-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 M634_07210 53eb24f77a962fec7abdaaa0fe2dc739 245 Gene3D G3DSA:3.40.50.150 21 245 9.8E-65 T 12-10-2018 M634_07210 53eb24f77a962fec7abdaaa0fe2dc739 245 PIRSF PIRSF006325 4 245 4.0E-125 T 12-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 M634_07210 53eb24f77a962fec7abdaaa0fe2dc739 245 Pfam PF13649 Methyltransferase domain 63 161 9.4E-14 T 12-10-2018 M634_07210 53eb24f77a962fec7abdaaa0fe2dc739 245 SUPERFAMILY SSF53335 23 245 2.94E-41 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_15485 53e00e768533ae46a41ef4a50d4a758e 368 Gene3D G3DSA:3.30.450.90 1 97 2.9E-23 T 12-10-2018 M634_15485 53e00e768533ae46a41ef4a50d4a758e 368 Gene3D G3DSA:3.40.50.300 99 356 5.8E-87 T 12-10-2018 M634_15485 53e00e768533ae46a41ef4a50d4a758e 368 Pfam PF00437 Type II/IV secretion system protein 116 268 3.4E-36 T 12-10-2018 IPR001482 Type II/IV secretion system protein M634_15485 53e00e768533ae46a41ef4a50d4a758e 368 SUPERFAMILY SSF52540 4 334 6.34E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_15485 53e00e768533ae46a41ef4a50d4a758e 368 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 3.4E-126 T 12-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 M634_11025 d72bebc67a8361be7b9d72edc435131c 136 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 17 105 6.0E-20 T 12-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 M634_11025 d72bebc67a8361be7b9d72edc435131c 136 SUPERFAMILY SSF51316 1 132 1.01E-33 T 12-10-2018 IPR011057 Mss4-like superfamily M634_11025 d72bebc67a8361be7b9d72edc435131c 136 Gene3D G3DSA:2.170.150.70 1 111 4.9E-13 T 12-10-2018 M634_04650 b59f8a53ea2bc8ae2de550875455e6e9 392 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 9 91 7.1E-27 T 12-10-2018 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 M634_04650 b59f8a53ea2bc8ae2de550875455e6e9 392 SUPERFAMILY SSF55021 284 381 2.37E-26 T 12-10-2018 M634_04650 b59f8a53ea2bc8ae2de550875455e6e9 392 Gene3D G3DSA:3.30.70.260 295 383 1.3E-25 T 12-10-2018 M634_04650 b59f8a53ea2bc8ae2de550875455e6e9 392 SUPERFAMILY SSF53850 109 295 3.8E-56 T 12-10-2018 M634_04650 b59f8a53ea2bc8ae2de550875455e6e9 392 SMART SM00830 12 93 1.4E-21 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 M634_04650 b59f8a53ea2bc8ae2de550875455e6e9 392 Gene3D G3DSA:3.40.190.10 113 287 4.4E-55 T 12-10-2018 M634_04650 b59f8a53ea2bc8ae2de550875455e6e9 392 Gene3D G3DSA:3.40.190.10 193 278 4.4E-55 T 12-10-2018 M634_04650 b59f8a53ea2bc8ae2de550875455e6e9 392 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 329 336 - T 12-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 M634_04650 b59f8a53ea2bc8ae2de550875455e6e9 392 Pfam PF00800 Prephenate dehydratase 110 291 3.7E-60 T 12-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 M634_04650 b59f8a53ea2bc8ae2de550875455e6e9 392 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 265 287 - T 12-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 M634_04650 b59f8a53ea2bc8ae2de550875455e6e9 392 Gene3D G3DSA:1.20.59.10 3 112 8.6E-31 T 12-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 M634_04650 b59f8a53ea2bc8ae2de550875455e6e9 392 Pfam PF01817 Chorismate mutase type II 12 91 2.8E-16 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 M634_04650 b59f8a53ea2bc8ae2de550875455e6e9 392 PIRSF PIRSF001500 1 384 6.5E-143 T 12-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 M634_04650 b59f8a53ea2bc8ae2de550875455e6e9 392 SUPERFAMILY SSF48600 7 95 7.51E-19 T 12-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 M634_05725 471e198c9cd90aef1b3d4136b3025412 362 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 M634_05725 471e198c9cd90aef1b3d4136b3025412 362 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 41.111 T 12-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 M634_05725 471e198c9cd90aef1b3d4136b3025412 362 Gene3D G3DSA:1.20.58.410 3 97 3.4E-9 T 12-10-2018 M634_05725 471e198c9cd90aef1b3d4136b3025412 362 Pfam PF00472 RF-1 domain 218 323 8.6E-39 T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 M634_05725 471e198c9cd90aef1b3d4136b3025412 362 SMART SM00937 67 180 6.8E-68 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 M634_05725 471e198c9cd90aef1b3d4136b3025412 362 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 360 3.7E-171 T 12-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 M634_05725 471e198c9cd90aef1b3d4136b3025412 362 Gene3D G3DSA:3.30.70.1660 115 343 2.9E-95 T 12-10-2018 M634_05725 471e198c9cd90aef1b3d4136b3025412 362 Gene3D G3DSA:3.30.160.20 212 293 2.9E-95 T 12-10-2018 M634_05725 471e198c9cd90aef1b3d4136b3025412 362 Pfam PF03462 PCRF domain 13 205 5.2E-78 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 M634_05725 471e198c9cd90aef1b3d4136b3025412 362 SUPERFAMILY SSF75620 12 355 9.68E-138 T 12-10-2018 M634_01520 8fd64bffe73b355ab1b22e408368a148 89 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 M634_01520 8fd64bffe73b355ab1b22e408368a148 89 SUPERFAMILY SSF54292 2 87 8.39E-27 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 M634_01520 8fd64bffe73b355ab1b22e408368a148 89 Gene3D G3DSA:3.10.20.30 1 89 8.1E-24 T 12-10-2018 IPR012675 Beta-grasp domain superfamily M634_01520 8fd64bffe73b355ab1b22e408368a148 89 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 78 7.3E-15 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 M634_17630 287f2e42505647c5a239b7d2e9fa79d4 726 PIRSF PIRSF009393 1 726 6.1E-288 T 12-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 M634_17630 287f2e42505647c5a239b7d2e9fa79d4 726 SUPERFAMILY SSF53383 117 574 2.79E-118 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_17630 287f2e42505647c5a239b7d2e9fa79d4 726 Gene3D G3DSA:3.90.1150.10 429 607 1.0E-67 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M634_17630 287f2e42505647c5a239b7d2e9fa79d4 726 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 358 372 - T 12-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 M634_17630 287f2e42505647c5a239b7d2e9fa79d4 726 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 19 111 1.9E-13 T 12-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 M634_17630 287f2e42505647c5a239b7d2e9fa79d4 726 SUPERFAMILY SSF52172 1 116 2.44E-25 T 12-10-2018 IPR011006 CheY-like superfamily M634_17630 287f2e42505647c5a239b7d2e9fa79d4 726 TIGRFAM TIGR04301 ODC_inducible: ornithine decarboxylase SpeF 1 725 0.0 T 12-10-2018 IPR027568 Ornithine decarboxylase SpeF GO:0004586 KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 M634_17630 287f2e42505647c5a239b7d2e9fa79d4 726 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 117 557 1.3E-186 T 12-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 M634_17630 287f2e42505647c5a239b7d2e9fa79d4 726 Gene3D G3DSA:3.40.640.10 117 427 1.3E-84 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_17630 287f2e42505647c5a239b7d2e9fa79d4 726 Gene3D G3DSA:3.40.50.220 22 116 1.2E-12 T 12-10-2018 IPR027464 Ornithine decarboxylase, N-terminal KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 M634_17630 287f2e42505647c5a239b7d2e9fa79d4 726 SUPERFAMILY SSF55904 578 725 1.44E-44 T 12-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 M634_17630 287f2e42505647c5a239b7d2e9fa79d4 726 Gene3D G3DSA:3.90.100.10 608 726 2.4E-41 T 12-10-2018 M634_17630 287f2e42505647c5a239b7d2e9fa79d4 726 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 583 711 5.1E-46 T 12-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 M634_14850 1cb3e7732bdff359d89e1a824fe577ea 337 Gene3D G3DSA:3.40.190.10 25 297 9.4E-127 T 12-10-2018 M634_14850 1cb3e7732bdff359d89e1a824fe577ea 337 SUPERFAMILY SSF53850 24 332 6.14E-77 T 12-10-2018 M634_14850 1cb3e7732bdff359d89e1a824fe577ea 337 Pfam PF13343 Bacterial extracellular solute-binding protein 72 298 8.2E-20 T 12-10-2018 M634_14850 1cb3e7732bdff359d89e1a824fe577ea 337 PIRSF PIRSF002825 1 337 3.1E-102 T 12-10-2018 IPR026045 Ferric binding protein M634_14850 1cb3e7732bdff359d89e1a824fe577ea 337 Gene3D G3DSA:3.40.190.10 120 328 9.4E-127 T 12-10-2018 M634_17815 4ce8aea20b629278d55d72a274926d69 329 Pfam PF02653 Branched-chain amino acid transport system / permease component 61 318 1.2E-37 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 M634_09620 0943d6a46cf90b8ea7b7c9856640d9af 248 Gene3D G3DSA:2.60.120.10 43 164 1.3E-48 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M634_09620 0943d6a46cf90b8ea7b7c9856640d9af 248 SUPERFAMILY SSF51206 23 162 1.44E-31 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like M634_09620 0943d6a46cf90b8ea7b7c9856640d9af 248 Pfam PF13545 Crp-like helix-turn-helix domain 168 241 2.1E-17 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 M634_09620 0943d6a46cf90b8ea7b7c9856640d9af 248 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 12-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 M634_09620 0943d6a46cf90b8ea7b7c9856640d9af 248 Gene3D G3DSA:1.10.10.10 165 248 3.0E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_09620 0943d6a46cf90b8ea7b7c9856640d9af 248 SUPERFAMILY SSF46785 165 245 1.95E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_09620 0943d6a46cf90b8ea7b7c9856640d9af 248 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 2.5E-11 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 M634_09620 0943d6a46cf90b8ea7b7c9856640d9af 248 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 2.5E-11 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 M634_09620 0943d6a46cf90b8ea7b7c9856640d9af 248 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 2.2E-15 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain M634_09620 0943d6a46cf90b8ea7b7c9856640d9af 248 SMART SM00100 30 151 2.0E-20 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain M634_09620 0943d6a46cf90b8ea7b7c9856640d9af 248 SMART SM00419 187 235 4.3E-15 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 M634_07830 264b18ef8f5be57f71d38119fa7753fe 484 PIRSF PIRSF000850 387 474 0.78 T 12-10-2018 M634_07830 264b18ef8f5be57f71d38119fa7753fe 484 PIRSF PIRSF000850 102 252 1.8 T 12-10-2018 M634_07830 264b18ef8f5be57f71d38119fa7753fe 484 PIRSF PIRSF000850 294 376 0.12 T 12-10-2018 M634_07830 264b18ef8f5be57f71d38119fa7753fe 484 Pfam PF13396 Phospholipase_D-nuclease N-terminal 24 59 3.0E-6 T 12-10-2018 IPR027379 Cardiolipin synthase N-terminal M634_07830 264b18ef8f5be57f71d38119fa7753fe 484 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 8 484 1.1E-153 T 12-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 M634_07830 264b18ef8f5be57f71d38119fa7753fe 484 SUPERFAMILY SSF56024 273 469 1.41E-48 T 12-10-2018 M634_07830 264b18ef8f5be57f71d38119fa7753fe 484 Gene3D G3DSA:3.30.870.10 116 309 5.3E-37 T 12-10-2018 M634_07830 264b18ef8f5be57f71d38119fa7753fe 484 SMART SM00155 219 246 4.0E-6 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 M634_07830 264b18ef8f5be57f71d38119fa7753fe 484 SMART SM00155 397 424 9.5E-7 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 M634_07830 264b18ef8f5be57f71d38119fa7753fe 484 Pfam PF13091 PLD-like domain 134 268 7.8E-16 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 M634_07830 264b18ef8f5be57f71d38119fa7753fe 484 Pfam PF13091 PLD-like domain 327 444 2.0E-24 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 M634_07830 264b18ef8f5be57f71d38119fa7753fe 484 SUPERFAMILY SSF56024 66 313 2.47E-50 T 12-10-2018 M634_07830 264b18ef8f5be57f71d38119fa7753fe 484 Gene3D G3DSA:3.30.870.10 315 456 2.5E-24 T 12-10-2018 M634_07830 264b18ef8f5be57f71d38119fa7753fe 484 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 484 49.846 T 12-10-2018 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 M634_23230 7cd5e522ee6d4f010f768164166f7058 637 SMART SM00267 461 634 7.1E-53 T 12-10-2018 IPR000160 GGDEF domain M634_23230 7cd5e522ee6d4f010f768164166f7058 637 Gene3D G3DSA:1.25.40.10 232 450 4.1E-15 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_23230 7cd5e522ee6d4f010f768164166f7058 637 Pfam PF00990 Diguanylate cyclase, GGDEF domain 473 630 1.4E-37 T 12-10-2018 IPR000160 GGDEF domain M634_23230 7cd5e522ee6d4f010f768164166f7058 637 SUPERFAMILY SSF48452 175 410 4.55E-21 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_23230 7cd5e522ee6d4f010f768164166f7058 637 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 469 633 5.2E-42 T 12-10-2018 IPR000160 GGDEF domain M634_23230 7cd5e522ee6d4f010f768164166f7058 637 Gene3D G3DSA:3.30.70.270 470 637 3.6E-48 T 12-10-2018 M634_23230 7cd5e522ee6d4f010f768164166f7058 637 SMART SM00028 239 272 55.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_23230 7cd5e522ee6d4f010f768164166f7058 637 SMART SM00028 361 394 400.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_23230 7cd5e522ee6d4f010f768164166f7058 637 SMART SM00028 319 352 320.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_23230 7cd5e522ee6d4f010f768164166f7058 637 SMART SM00028 155 188 120.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_23230 7cd5e522ee6d4f010f768164166f7058 637 SMART SM00028 195 228 0.068 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_23230 7cd5e522ee6d4f010f768164166f7058 637 SUPERFAMILY SSF55073 477 634 9.42E-42 T 12-10-2018 IPR029787 Nucleotide cyclase M634_23230 7cd5e522ee6d4f010f768164166f7058 637 Pfam PF13424 Tetratricopeptide repeat 156 227 3.8E-9 T 12-10-2018 M634_23230 7cd5e522ee6d4f010f768164166f7058 637 Gene3D G3DSA:1.25.40.10 141 231 5.5E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_20900 8ba050de27e1f68df3b1ba5c93e7af22 873 Gene3D G3DSA:3.30.565.10 441 600 8.5E-47 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_20900 8ba050de27e1f68df3b1ba5c93e7af22 873 Gene3D G3DSA:3.40.50.2300 728 865 7.9E-37 T 12-10-2018 M634_20900 8ba050de27e1f68df3b1ba5c93e7af22 873 SUPERFAMILY SSF52172 739 860 4.55E-35 T 12-10-2018 IPR011006 CheY-like superfamily M634_20900 8ba050de27e1f68df3b1ba5c93e7af22 873 SUPERFAMILY SSF47384 360 440 1.08E-19 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M634_20900 8ba050de27e1f68df3b1ba5c93e7af22 873 SMART SM00086 312 354 1.4E-8 T 12-10-2018 IPR001610 PAC motif M634_20900 8ba050de27e1f68df3b1ba5c93e7af22 873 Pfam PF00512 His Kinase A (phospho-acceptor) domain 374 439 3.7E-17 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_20900 8ba050de27e1f68df3b1ba5c93e7af22 873 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 240 361 4.3E-18 T 12-10-2018 IPR000014 PAS domain M634_20900 8ba050de27e1f68df3b1ba5c93e7af22 873 SMART SM00387 486 597 1.2E-32 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_20900 8ba050de27e1f68df3b1ba5c93e7af22 873 Gene3D G3DSA:3.30.450.20 223 363 4.6E-36 T 12-10-2018 M634_20900 8ba050de27e1f68df3b1ba5c93e7af22 873 SMART SM00091 239 305 2.8E-8 T 12-10-2018 IPR000014 PAS domain M634_20900 8ba050de27e1f68df3b1ba5c93e7af22 873 SUPERFAMILY SSF55874 428 595 1.44E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_20900 8ba050de27e1f68df3b1ba5c93e7af22 873 SMART SM00388 374 439 5.0E-20 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_20900 8ba050de27e1f68df3b1ba5c93e7af22 873 Pfam PF00072 Response regulator receiver domain 744 857 5.8E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_20900 8ba050de27e1f68df3b1ba5c93e7af22 873 SUPERFAMILY SSF55785 246 354 1.22E-26 T 12-10-2018 IPR035965 PAS domain superfamily M634_20900 8ba050de27e1f68df3b1ba5c93e7af22 873 SMART SM00304 170 222 1.9E-5 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_20900 8ba050de27e1f68df3b1ba5c93e7af22 873 Pfam PF13426 PAS domain 250 353 1.3E-20 T 12-10-2018 IPR000014 PAS domain M634_20900 8ba050de27e1f68df3b1ba5c93e7af22 873 Gene3D G3DSA:1.10.287.130 364 440 6.7E-22 T 12-10-2018 M634_20900 8ba050de27e1f68df3b1ba5c93e7af22 873 SMART SM00448 741 857 3.4E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_20900 8ba050de27e1f68df3b1ba5c93e7af22 873 PRINTS PR00344 Bacterial sensor protein C-terminal signature 581 594 1.6E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_20900 8ba050de27e1f68df3b1ba5c93e7af22 873 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 536 1.6E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_20900 8ba050de27e1f68df3b1ba5c93e7af22 873 PRINTS PR00344 Bacterial sensor protein C-terminal signature 557 575 1.6E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_20900 8ba050de27e1f68df3b1ba5c93e7af22 873 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 486 596 5.9E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_15435 3d74f60cd65cbbaee089e76e76916c68 664 SUPERFAMILY SSF52922 533 664 2.49E-45 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 M634_15435 3d74f60cd65cbbaee089e76e76916c68 664 SMART SM00861 354 525 1.8E-67 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain M634_15435 3d74f60cd65cbbaee089e76e76916c68 664 SUPERFAMILY SSF52518 333 526 8.06E-68 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold M634_15435 3d74f60cd65cbbaee089e76e76916c68 664 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 333 2.6E-166 T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 M634_15435 3d74f60cd65cbbaee089e76e76916c68 664 SUPERFAMILY SSF52518 6 319 2.95E-119 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold M634_15435 3d74f60cd65cbbaee089e76e76916c68 664 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 12-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 M634_15435 3d74f60cd65cbbaee089e76e76916c68 664 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 663 0.0 T 12-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 M634_15435 3d74f60cd65cbbaee089e76e76916c68 664 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 2.3E-47 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain M634_15435 3d74f60cd65cbbaee089e76e76916c68 664 Gene3D G3DSA:3.40.50.970 1 325 5.9E-130 T 12-10-2018 M634_15435 3d74f60cd65cbbaee089e76e76916c68 664 Gene3D G3DSA:3.40.50.920 538 664 6.5E-47 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 M634_15435 3d74f60cd65cbbaee089e76e76916c68 664 Gene3D G3DSA:3.40.50.970 326 537 5.7E-85 T 12-10-2018 M634_15435 3d74f60cd65cbbaee089e76e76916c68 664 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 M634_15435 3d74f60cd65cbbaee089e76e76916c68 664 Pfam PF02780 Transketolase, C-terminal domain 541 655 1.2E-21 T 12-10-2018 IPR033248 Transketolase, C-terminal domain M634_09460 ab08065a3a19bd96d48b37a3ceb290bb 707 SUPERFAMILY SSF53335 140 371 4.74E-42 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_09460 ab08065a3a19bd96d48b37a3ceb290bb 707 Gene3D G3DSA:3.30.2130.30 6 255 8.4E-136 T 12-10-2018 M634_09460 ab08065a3a19bd96d48b37a3ceb290bb 707 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 706 31.442 T 12-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 M634_09460 ab08065a3a19bd96d48b37a3ceb290bb 707 SMART SM00981 56 154 1.7E-19 T 12-10-2018 IPR004114 THUMP domain GO:0003723 M634_09460 ab08065a3a19bd96d48b37a3ceb290bb 707 Pfam PF01170 Putative RNA methylase family UPF0020 162 374 5.1E-62 T 12-10-2018 IPR000241 Putative RNA methylase domain M634_09460 ab08065a3a19bd96d48b37a3ceb290bb 707 Gene3D G3DSA:3.40.50.150 488 706 2.6E-74 T 12-10-2018 M634_09460 ab08065a3a19bd96d48b37a3ceb290bb 707 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 305 311 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 M634_09460 ab08065a3a19bd96d48b37a3ceb290bb 707 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 436 661 5.4E-28 T 12-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 M634_09460 ab08065a3a19bd96d48b37a3ceb290bb 707 Gene3D G3DSA:3.40.50.150 169 371 8.4E-136 T 12-10-2018 M634_09460 ab08065a3a19bd96d48b37a3ceb290bb 707 SUPERFAMILY SSF53335 399 707 2.94E-70 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_09460 ab08065a3a19bd96d48b37a3ceb290bb 707 Pfam PF02926 THUMP domain 30 153 2.8E-13 T 12-10-2018 IPR004114 THUMP domain GO:0003723 M634_09460 ab08065a3a19bd96d48b37a3ceb290bb 707 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 12-10-2018 IPR000241 Putative RNA methylase domain M634_09460 ab08065a3a19bd96d48b37a3ceb290bb 707 Gene3D G3DSA:3.30.750.80 396 487 4.4E-35 T 12-10-2018 M634_09460 ab08065a3a19bd96d48b37a3ceb290bb 707 PIRSF PIRSF037618 1 707 3.0E-296 T 12-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 M634_03695 f454014ae19f6adad68f3b2c8cdabf9f 471 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 465 7.9E-267 T 12-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 M634_03695 f454014ae19f6adad68f3b2c8cdabf9f 471 SUPERFAMILY SSF53732 1 466 9.16E-166 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 M634_03695 f454014ae19f6adad68f3b2c8cdabf9f 471 Pfam PF00330 Aconitase family (aconitate hydratase) 7 457 1.4E-160 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M634_03695 f454014ae19f6adad68f3b2c8cdabf9f 471 PRINTS PR00415 Aconitase family signature 82 95 9.7E-51 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M634_03695 f454014ae19f6adad68f3b2c8cdabf9f 471 PRINTS PR00415 Aconitase family signature 108 116 9.7E-51 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M634_03695 f454014ae19f6adad68f3b2c8cdabf9f 471 PRINTS PR00415 Aconitase family signature 286 300 9.7E-51 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M634_03695 f454014ae19f6adad68f3b2c8cdabf9f 471 PRINTS PR00415 Aconitase family signature 195 208 9.7E-51 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M634_03695 f454014ae19f6adad68f3b2c8cdabf9f 471 PRINTS PR00415 Aconitase family signature 209 222 9.7E-51 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M634_03695 f454014ae19f6adad68f3b2c8cdabf9f 471 PRINTS PR00415 Aconitase family signature 133 148 9.7E-51 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M634_03695 f454014ae19f6adad68f3b2c8cdabf9f 471 PRINTS PR00415 Aconitase family signature 399 412 9.7E-51 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M634_03695 f454014ae19f6adad68f3b2c8cdabf9f 471 PRINTS PR00415 Aconitase family signature 343 354 9.7E-51 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M634_03695 f454014ae19f6adad68f3b2c8cdabf9f 471 PRINTS PR00415 Aconitase family signature 119 132 9.7E-51 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M634_03695 f454014ae19f6adad68f3b2c8cdabf9f 471 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 466 60.916 T 12-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 M634_03695 f454014ae19f6adad68f3b2c8cdabf9f 471 Gene3D G3DSA:3.30.499.20 4 286 3.6E-100 T 12-10-2018 M634_03695 f454014ae19f6adad68f3b2c8cdabf9f 471 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 M634_03695 f454014ae19f6adad68f3b2c8cdabf9f 471 Gene3D G3DSA:3.30.499.10 328 471 4.9E-49 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 M634_03695 f454014ae19f6adad68f3b2c8cdabf9f 471 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 M634_06015 af7ea6baaa08fbc5012f866a2064fe23 503 Gene3D G3DSA:3.40.720.10 191 459 3.4E-5 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 M634_06015 af7ea6baaa08fbc5012f866a2064fe23 503 TIGRFAM TIGR03368 cellulose_yhjU: cellulose synthase operon protein YhjU 2 500 1.9E-205 T 12-10-2018 IPR017744 Cellulose biosynthesis protein BcsG M634_06015 af7ea6baaa08fbc5012f866a2064fe23 503 Pfam PF11658 Cellulose biosynthesis protein BcsG 1 497 5.5E-195 T 12-10-2018 IPR017744 Cellulose biosynthesis protein BcsG M634_02810 a35976afb4f0a67655f2e016fda846e4 207 Pfam PF00625 Guanylate kinase 5 185 2.7E-63 T 12-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit M634_02810 a35976afb4f0a67655f2e016fda846e4 207 SMART SM00072 3 187 2.2E-77 T 12-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit M634_02810 a35976afb4f0a67655f2e016fda846e4 207 Gene3D G3DSA:3.40.50.300 8 183 2.3E-74 T 12-10-2018 M634_02810 a35976afb4f0a67655f2e016fda846e4 207 Gene3D G3DSA:3.30.63.10 37 96 2.3E-74 T 12-10-2018 M634_02810 a35976afb4f0a67655f2e016fda846e4 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 38.191 T 12-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 M634_02810 a35976afb4f0a67655f2e016fda846e4 207 SUPERFAMILY SSF52540 3 189 2.56E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_02810 a35976afb4f0a67655f2e016fda846e4 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 12-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 M634_02810 a35976afb4f0a67655f2e016fda846e4 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 3.2E-76 T 12-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 M634_03670 5228095df815efba4f1775dc9573701e 427 Gene3D G3DSA:1.10.4030.30 25 272 7.0E-69 T 12-10-2018 M634_03670 5228095df815efba4f1775dc9573701e 427 SUPERFAMILY SSF54534 278 380 2.42E-29 T 12-10-2018 M634_03670 5228095df815efba4f1775dc9573701e 427 Hamap MF_01183 Chaperone SurA [surA]. 8 423 31.976 T 12-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 M634_03670 5228095df815efba4f1775dc9573701e 427 Gene3D G3DSA:3.10.50.40 275 415 4.8E-39 T 12-10-2018 M634_03670 5228095df815efba4f1775dc9573701e 427 SUPERFAMILY SSF109998 24 196 1.7E-38 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily M634_03670 5228095df815efba4f1775dc9573701e 427 Gene3D G3DSA:3.10.50.40 171 270 7.0E-69 T 12-10-2018 M634_03670 5228095df815efba4f1775dc9573701e 427 Pfam PF13616 PPIC-type PPIASE domain 163 269 1.0E-20 T 12-10-2018 M634_03670 5228095df815efba4f1775dc9573701e 427 Pfam PF13616 PPIC-type PPIASE domain 276 378 1.3E-23 T 12-10-2018 M634_03670 5228095df815efba4f1775dc9573701e 427 Pfam PF09312 SurA N-terminal domain 24 141 2.0E-43 T 12-10-2018 IPR015391 SurA N-terminal M634_03670 5228095df815efba4f1775dc9573701e 427 SUPERFAMILY SSF54534 172 270 1.96E-24 T 12-10-2018 M634_24050 2f90a99489da06a7071ccf32d7479f8c 259 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 238 254 9.3E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M634_24050 2f90a99489da06a7071ccf32d7479f8c 259 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 223 238 9.3E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M634_24050 2f90a99489da06a7071ccf32d7479f8c 259 Gene3D G3DSA:1.10.10.60 146 258 2.4E-23 T 12-10-2018 M634_24050 2f90a99489da06a7071ccf32d7479f8c 259 SMART SM00342 172 254 4.2E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_24050 2f90a99489da06a7071ccf32d7479f8c 259 SUPERFAMILY SSF46689 207 256 4.93E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_24050 2f90a99489da06a7071ccf32d7479f8c 259 Pfam PF12833 Helix-turn-helix domain 178 255 6.9E-17 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_14205 173db8e48a858638e0ddae3e21dedd63 297 SUPERFAMILY SSF51735 3 166 4.13E-55 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_14205 173db8e48a858638e0ddae3e21dedd63 297 SUPERFAMILY SSF48179 168 291 2.89E-35 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 M634_14205 173db8e48a858638e0ddae3e21dedd63 297 Gene3D G3DSA:3.40.50.720 2 167 5.2E-51 T 12-10-2018 M634_14205 173db8e48a858638e0ddae3e21dedd63 297 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 168 291 6.5E-36 T 12-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain M634_14205 173db8e48a858638e0ddae3e21dedd63 297 Gene3D G3DSA:1.10.1040.10 168 297 1.0E-41 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 M634_14205 173db8e48a858638e0ddae3e21dedd63 297 Pfam PF02558 Ketopantoate reductase PanE/ApbA 4 142 1.1E-31 T 12-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain M634_14205 173db8e48a858638e0ddae3e21dedd63 297 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 3 293 4.8E-79 T 12-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 M634_14690 86af9dbb73420080756588027e2593e6 446 SUPERFAMILY SSF53738 157 257 5.49E-29 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_14690 86af9dbb73420080756588027e2593e6 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 259 368 2.4E-30 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_14690 86af9dbb73420080756588027e2593e6 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 255 1.4E-18 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_14690 86af9dbb73420080756588027e2593e6 446 Gene3D G3DSA:3.40.120.10 4 155 4.7E-49 T 12-10-2018 M634_14690 86af9dbb73420080756588027e2593e6 446 SUPERFAMILY SSF55957 358 444 2.88E-22 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_14690 86af9dbb73420080756588027e2593e6 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 136 1.4E-45 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_14690 86af9dbb73420080756588027e2593e6 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 442 6.8E-13 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_14690 86af9dbb73420080756588027e2593e6 446 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 8 443 2.5E-204 T 12-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_14690 86af9dbb73420080756588027e2593e6 446 SUPERFAMILY SSF53738 4 182 7.46E-49 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_14690 86af9dbb73420080756588027e2593e6 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 175 194 2.9E-13 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_14690 86af9dbb73420080756588027e2593e6 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 2.9E-13 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_14690 86af9dbb73420080756588027e2593e6 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 96 110 2.9E-13 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_14690 86af9dbb73420080756588027e2593e6 446 SUPERFAMILY SSF53738 259 365 2.2E-28 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_14690 86af9dbb73420080756588027e2593e6 446 Gene3D G3DSA:3.40.120.10 176 363 1.2E-59 T 12-10-2018 M634_14690 86af9dbb73420080756588027e2593e6 446 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 97 106 - T 12-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_14690 86af9dbb73420080756588027e2593e6 446 Gene3D G3DSA:3.30.310.50 371 446 2.5E-25 T 12-10-2018 M634_14690 86af9dbb73420080756588027e2593e6 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 4 445 46.97 T 12-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_14690 86af9dbb73420080756588027e2593e6 446 Gene3D G3DSA:3.40.120.10 258 340 1.2E-59 T 12-10-2018 M634_12725 ffc3625c80b298d1c44a9b410ae41ba5 211 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 2 194 26.82 T 12-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 M634_12725 ffc3625c80b298d1c44a9b410ae41ba5 211 PIRSF PIRSF006091 1 205 7.5E-78 T 12-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 M634_12725 ffc3625c80b298d1c44a9b410ae41ba5 211 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 193 9.8E-65 T 12-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 M634_12725 ffc3625c80b298d1c44a9b410ae41ba5 211 SMART SM00900 100 192 8.7E-34 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 M634_12725 ffc3625c80b298d1c44a9b410ae41ba5 211 Pfam PF04205 FMN-binding domain 100 189 3.9E-20 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 M634_10475 89a357185d9698a1a982b00db1b655f6 571 SUPERFAMILY SSF116726 222 287 1.96E-8 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 M634_10475 89a357185d9698a1a982b00db1b655f6 571 Gene3D G3DSA:3.30.70.1450 303 385 5.3E-6 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 M634_10475 89a357185d9698a1a982b00db1b655f6 571 Pfam PF06826 Predicted Permease Membrane Region 393 562 7.8E-32 T 12-10-2018 IPR006512 YidE/YbjL duplication M634_10475 89a357185d9698a1a982b00db1b655f6 571 Pfam PF06826 Predicted Permease Membrane Region 15 180 4.4E-30 T 12-10-2018 IPR006512 YidE/YbjL duplication M634_10475 89a357185d9698a1a982b00db1b655f6 571 SUPERFAMILY SSF116726 309 379 1.44E-7 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 M634_10475 89a357185d9698a1a982b00db1b655f6 571 TIGRFAM TIGR03802 Asp_Ala_antiprt: aspartate-alanine antiporter 2 564 1.4E-201 T 12-10-2018 IPR022457 Aspartate-alanine antiporter GO:0005215|GO:0016020 M634_10475 89a357185d9698a1a982b00db1b655f6 571 Pfam PF02080 TrkA-C domain 223 286 1.2E-7 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 M634_10475 89a357185d9698a1a982b00db1b655f6 571 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 397 548 2.0E-25 T 12-10-2018 IPR006512 YidE/YbjL duplication M634_10475 89a357185d9698a1a982b00db1b655f6 571 Gene3D G3DSA:3.30.70.1450 217 291 3.0E-8 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 M634_23005 c124e60872b1501032b2de31210e166e 290 SMART SM00342 202 284 2.5E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_23005 c124e60872b1501032b2de31210e166e 290 Pfam PF02311 AraC-like ligand binding domain 49 125 5.2E-7 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 M634_23005 c124e60872b1501032b2de31210e166e 290 Pfam PF12833 Helix-turn-helix domain 209 285 1.4E-17 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_23005 c124e60872b1501032b2de31210e166e 290 Gene3D G3DSA:1.10.10.60 187 288 3.0E-19 T 12-10-2018 M634_23005 c124e60872b1501032b2de31210e166e 290 SUPERFAMILY SSF51182 60 111 1.45E-8 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily M634_23005 c124e60872b1501032b2de31210e166e 290 Gene3D G3DSA:2.60.120.10 22 120 1.1E-6 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M634_23005 c124e60872b1501032b2de31210e166e 290 SUPERFAMILY SSF46689 238 286 8.96E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_00335 d53423b9681ae6b012921a45097e4f65 699 Pfam PF03764 Elongation factor G, domain IV 484 603 1.3E-48 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 M634_00335 d53423b9681ae6b012921a45097e4f65 699 SUPERFAMILY SSF54211 484 604 5.31E-47 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M634_00335 d53423b9681ae6b012921a45097e4f65 699 Hamap MF_00054_B Elongation factor G [fusA]. 6 697 113.477 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 M634_00335 d53423b9681ae6b012921a45097e4f65 699 PRINTS PR00315 GTP-binding elongation factor signature 58 66 9.4E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_00335 d53423b9681ae6b012921a45097e4f65 699 PRINTS PR00315 GTP-binding elongation factor signature 101 112 9.4E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_00335 d53423b9681ae6b012921a45097e4f65 699 PRINTS PR00315 GTP-binding elongation factor signature 85 95 9.4E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_00335 d53423b9681ae6b012921a45097e4f65 699 PRINTS PR00315 GTP-binding elongation factor signature 137 146 9.4E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_00335 d53423b9681ae6b012921a45097e4f65 699 PRINTS PR00315 GTP-binding elongation factor signature 12 25 9.4E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_00335 d53423b9681ae6b012921a45097e4f65 699 SMART SM00889 485 603 4.6E-76 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 M634_00335 d53423b9681ae6b012921a45097e4f65 699 Pfam PF14492 Elongation Factor G, domain II 409 483 1.5E-33 T 12-10-2018 M634_00335 d53423b9681ae6b012921a45097e4f65 699 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 697 0.0 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 M634_00335 d53423b9681ae6b012921a45097e4f65 699 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 4.2E-66 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_00335 d53423b9681ae6b012921a45097e4f65 699 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site M634_00335 d53423b9681ae6b012921a45097e4f65 699 SUPERFAMILY SSF54980 608 695 3.36E-30 T 12-10-2018 IPR035647 EF-G domain III/V-like M634_00335 d53423b9681ae6b012921a45097e4f65 699 Gene3D G3DSA:2.40.30.10 299 405 1.9E-48 T 12-10-2018 M634_00335 d53423b9681ae6b012921a45097e4f65 699 Gene3D G3DSA:3.30.70.870 410 485 4.1E-32 T 12-10-2018 M634_00335 d53423b9681ae6b012921a45097e4f65 699 Gene3D G3DSA:3.40.50.300 1 298 9.3E-115 T 12-10-2018 M634_00335 d53423b9681ae6b012921a45097e4f65 699 SUPERFAMILY SSF50447 271 409 5.52E-36 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily M634_00335 d53423b9681ae6b012921a45097e4f65 699 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 187 1.4E-34 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 M634_00335 d53423b9681ae6b012921a45097e4f65 699 Pfam PF03144 Elongation factor Tu domain 2 329 396 5.4E-18 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 M634_00335 d53423b9681ae6b012921a45097e4f65 699 Gene3D G3DSA:3.30.230.10 489 693 3.2E-92 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M634_00335 d53423b9681ae6b012921a45097e4f65 699 Gene3D G3DSA:3.30.70.240 609 680 3.2E-92 T 12-10-2018 M634_00335 d53423b9681ae6b012921a45097e4f65 699 SUPERFAMILY SSF54980 407 485 8.63E-25 T 12-10-2018 IPR035647 EF-G domain III/V-like M634_00335 d53423b9681ae6b012921a45097e4f65 699 SMART SM00838 605 693 6.1E-57 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like M634_00335 d53423b9681ae6b012921a45097e4f65 699 Pfam PF00679 Elongation factor G C-terminus 605 692 4.0E-31 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like M634_00335 d53423b9681ae6b012921a45097e4f65 699 SUPERFAMILY SSF52540 6 288 5.66E-106 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_23105 2c4ac86b2049d00a01203881679560d5 262 Pfam PF13672 Protein phosphatase 2C 19 210 9.3E-22 T 12-10-2018 M634_23105 2c4ac86b2049d00a01203881679560d5 262 SMART SM00332 1 235 2.2E-16 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 M634_23105 2c4ac86b2049d00a01203881679560d5 262 Gene3D G3DSA:3.60.40.10 1 240 1.1E-59 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 M634_23105 2c4ac86b2049d00a01203881679560d5 262 SUPERFAMILY SSF81606 8 237 6.93E-62 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 M634_23105 2c4ac86b2049d00a01203881679560d5 262 SMART SM00331 11 237 2.9E-23 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 M634_18135 7b6f7b978df5c5b590f5e475e05632e6 194 Gene3D G3DSA:3.40.50.360 1 193 6.1E-51 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M634_18135 7b6f7b978df5c5b590f5e475e05632e6 194 Pfam PF03358 NADPH-dependent FMN reductase 15 137 1.3E-13 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 M634_18135 7b6f7b978df5c5b590f5e475e05632e6 194 SUPERFAMILY SSF52218 1 191 5.24E-43 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M634_15515 9fb933e29602b573562b4960424eddee 143 Pfam PF14467 Domain of unknown function (DUF4426) 23 142 4.8E-49 T 12-10-2018 IPR025218 Domain of unknown function DUF4426 M634_15515 9fb933e29602b573562b4960424eddee 143 Gene3D G3DSA:2.60.40.3340 14 143 2.5E-41 T 12-10-2018 M634_00535 8771d4fba3dfdc5339ee9fa8f4d9097a 87 Gene3D G3DSA:2.30.30.100 1 72 4.7E-35 T 12-10-2018 M634_00535 8771d4fba3dfdc5339ee9fa8f4d9097a 87 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.727 T 12-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 M634_00535 8771d4fba3dfdc5339ee9fa8f4d9097a 87 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 6.8E-30 T 12-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 M634_00535 8771d4fba3dfdc5339ee9fa8f4d9097a 87 Pfam PF17209 Hfq protein 7 69 1.7E-31 T 12-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 M634_00535 8771d4fba3dfdc5339ee9fa8f4d9097a 87 SUPERFAMILY SSF50182 7 69 1.19E-24 T 12-10-2018 IPR010920 LSM domain superfamily M634_15300 8311c07b44c70906280a988dce895e93 156 PIRSF PIRSF004923 1 156 2.1E-38 T 12-10-2018 IPR026268 Protein RseC M634_15300 8311c07b44c70906280a988dce895e93 156 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 18 149 2.3E-32 T 12-10-2018 M634_08175 70bea5fde5bb49690e32e60c192b3df4 445 Pfam PF00990 Diguanylate cyclase, GGDEF domain 278 430 5.5E-38 T 12-10-2018 IPR000160 GGDEF domain M634_08175 70bea5fde5bb49690e32e60c192b3df4 445 SUPERFAMILY SSF49785 39 215 2.81E-11 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily M634_08175 70bea5fde5bb49690e32e60c192b3df4 445 Gene3D G3DSA:3.30.70.270 264 434 4.7E-48 T 12-10-2018 M634_08175 70bea5fde5bb49690e32e60c192b3df4 445 Pfam PF08547 Complex I intermediate-associated protein 30 (CIA30) 39 167 9.3E-4 T 12-10-2018 IPR013857 NADH:ubiquinone oxidoreductase intermediate-associated protein 30 Reactome: R-HSA-6799198 M634_08175 70bea5fde5bb49690e32e60c192b3df4 445 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 276 434 3.1E-42 T 12-10-2018 IPR000160 GGDEF domain M634_08175 70bea5fde5bb49690e32e60c192b3df4 445 SUPERFAMILY SSF55073 283 433 6.54E-41 T 12-10-2018 IPR029787 Nucleotide cyclase M634_08175 70bea5fde5bb49690e32e60c192b3df4 445 SMART SM00267 267 434 1.1E-46 T 12-10-2018 IPR000160 GGDEF domain M634_18960 0c422a22ac0157e9324551e494e6dc67 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 52.494 T 12-10-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK M634_18960 0c422a22ac0157e9324551e494e6dc67 301 Gene3D G3DSA:3.40.50.20 1 114 2.2E-40 T 12-10-2018 M634_18960 0c422a22ac0157e9324551e494e6dc67 301 Gene3D G3DSA:3.30.470.80 182 299 1.0E-42 T 12-10-2018 M634_18960 0c422a22ac0157e9324551e494e6dc67 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 3 286 1.4E-84 T 12-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 M634_18960 0c422a22ac0157e9324551e494e6dc67 301 Pfam PF08443 RimK-like ATP-grasp domain 98 286 6.0E-67 T 12-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 M634_18960 0c422a22ac0157e9324551e494e6dc67 301 Gene3D G3DSA:3.30.1490.20 115 181 1.9E-26 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 M634_18960 0c422a22ac0157e9324551e494e6dc67 301 SUPERFAMILY SSF56059 98 288 7.07E-51 T 12-10-2018 M634_06220 f6d2b6c61548323072a558e096bca298 429 Gene3D G3DSA:2.20.28.60 1 50 1.6E-26 T 12-10-2018 M634_06220 f6d2b6c61548323072a558e096bca298 429 PIRSF PIRSF001369 38 429 2.1E-174 T 12-10-2018 IPR024176 Citrate synthase, bacterial-type M634_06220 f6d2b6c61548323072a558e096bca298 429 Gene3D G3DSA:1.10.580.10 57 411 4.4E-151 T 12-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 M634_06220 f6d2b6c61548323072a558e096bca298 429 SUPERFAMILY SSF48256 4 428 9.68E-170 T 12-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 M634_06220 f6d2b6c61548323072a558e096bca298 429 Pfam PF00285 Citrate synthase, C-terminal domain 49 411 3.3E-135 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 M634_06220 f6d2b6c61548323072a558e096bca298 429 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 422 2.3E-238 T 12-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 M634_06220 f6d2b6c61548323072a558e096bca298 429 Gene3D G3DSA:1.10.230.10 268 376 4.4E-151 T 12-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain M634_06220 f6d2b6c61548323072a558e096bca298 429 PRINTS PR00143 Citrate synthase signature 241 269 1.8E-54 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 M634_06220 f6d2b6c61548323072a558e096bca298 429 PRINTS PR00143 Citrate synthase signature 296 316 1.8E-54 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 M634_06220 f6d2b6c61548323072a558e096bca298 429 PRINTS PR00143 Citrate synthase signature 379 393 1.8E-54 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 M634_06220 f6d2b6c61548323072a558e096bca298 429 PRINTS PR00143 Citrate synthase signature 219 234 1.8E-54 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 M634_06220 f6d2b6c61548323072a558e096bca298 429 PRINTS PR00143 Citrate synthase signature 165 178 1.8E-54 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 M634_06220 f6d2b6c61548323072a558e096bca298 429 PRINTS PR00143 Citrate synthase signature 359 375 1.8E-54 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 M634_06220 f6d2b6c61548323072a558e096bca298 429 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 12-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 M634_04785 f92553bd4a3c438164a91c43a31b311a 272 SUPERFAMILY SSF52540 22 258 6.98E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_04785 f92553bd4a3c438164a91c43a31b311a 272 SMART SM00382 50 252 1.6E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_04785 f92553bd4a3c438164a91c43a31b311a 272 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_04785 f92553bd4a3c438164a91c43a31b311a 272 Pfam PF00005 ABC transporter 41 197 2.1E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_04785 f92553bd4a3c438164a91c43a31b311a 272 Gene3D G3DSA:3.40.50.300 21 269 1.0E-65 T 12-10-2018 M634_04785 f92553bd4a3c438164a91c43a31b311a 272 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 26 272 5.2E-124 T 12-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 M634_18350 b80788c716cc4a4671ca56febc5c4b84 266 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 2.7E-140 T 12-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 M634_18350 b80788c716cc4a4671ca56febc5c4b84 266 Gene3D G3DSA:3.40.50.1360 1 266 2.6E-118 T 12-10-2018 M634_18350 b80788c716cc4a4671ca56febc5c4b84 266 SUPERFAMILY SSF100950 1 263 2.77E-102 T 12-10-2018 IPR037171 NagB/RpiA transferase-like M634_18350 b80788c716cc4a4671ca56febc5c4b84 266 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 12-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 M634_18350 b80788c716cc4a4671ca56febc5c4b84 266 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 10 218 4.9E-20 T 12-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 M634_18350 b80788c716cc4a4671ca56febc5c4b84 266 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 40.676 T 12-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 M634_16650 f6c211a9b70f38f040a3440f3c20a2ed 696 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 57 695 1.7E-106 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 M634_16650 f6c211a9b70f38f040a3440f3c20a2ed 696 SUPERFAMILY SSF56935 32 696 1.28E-132 T 12-10-2018 M634_16650 f6c211a9b70f38f040a3440f3c20a2ed 696 Pfam PF07715 TonB-dependent Receptor Plug Domain 56 155 6.9E-17 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain M634_16650 f6c211a9b70f38f040a3440f3c20a2ed 696 Gene3D G3DSA:2.170.130.10 31 165 8.9E-32 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily M634_16650 f6c211a9b70f38f040a3440f3c20a2ed 696 Gene3D G3DSA:2.40.170.20 166 696 1.6E-130 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily M634_16650 f6c211a9b70f38f040a3440f3c20a2ed 696 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 47 - T 12-10-2018 IPR010916 TonB box, conserved site M634_16650 f6c211a9b70f38f040a3440f3c20a2ed 696 Pfam PF00593 TonB dependent receptor 232 695 1.5E-62 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel M634_23445 21fef66a23799b8452f00aeccc45f7ab 408 Gene3D G3DSA:3.40.47.10 130 402 8.1E-136 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M634_23445 21fef66a23799b8452f00aeccc45f7ab 408 SUPERFAMILY SSF53901 273 405 1.56E-34 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M634_23445 21fef66a23799b8452f00aeccc45f7ab 408 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 88 106 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 M634_23445 21fef66a23799b8452f00aeccc45f7ab 408 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 404 9.6E-125 T 12-10-2018 IPR002155 Thiolase GO:0016747 M634_23445 21fef66a23799b8452f00aeccc45f7ab 408 Pfam PF00108 Thiolase, N-terminal domain 6 265 2.7E-82 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 M634_23445 21fef66a23799b8452f00aeccc45f7ab 408 ProSitePatterns PS00099 Thiolases active site. 388 401 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 M634_23445 21fef66a23799b8452f00aeccc45f7ab 408 Pfam PF02803 Thiolase, C-terminal domain 273 405 2.4E-36 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 M634_23445 21fef66a23799b8452f00aeccc45f7ab 408 SUPERFAMILY SSF53901 4 271 1.53E-76 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M634_23445 21fef66a23799b8452f00aeccc45f7ab 408 Gene3D G3DSA:3.40.47.10 7 278 8.1E-136 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M634_23445 21fef66a23799b8452f00aeccc45f7ab 408 PIRSF PIRSF000429 1 407 9.1E-109 T 12-10-2018 IPR002155 Thiolase GO:0016747 M634_13695 db17a05e2d794d265aaf7fc7e3abaa56 378 Pfam PF07196 Flagellin hook IN motif 195 249 6.0E-11 T 12-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 M634_13695 db17a05e2d794d265aaf7fc7e3abaa56 378 Gene3D G3DSA:1.20.1330.10 44 328 1.6E-76 T 12-10-2018 M634_13695 db17a05e2d794d265aaf7fc7e3abaa56 378 Gene3D G3DSA:3.30.70.2120 174 276 1.6E-76 T 12-10-2018 M634_13695 db17a05e2d794d265aaf7fc7e3abaa56 378 PRINTS PR00207 Flagellin signature 37 54 2.5E-27 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 M634_13695 db17a05e2d794d265aaf7fc7e3abaa56 378 PRINTS PR00207 Flagellin signature 111 134 2.5E-27 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 M634_13695 db17a05e2d794d265aaf7fc7e3abaa56 378 PRINTS PR00207 Flagellin signature 76 95 2.5E-27 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 M634_13695 db17a05e2d794d265aaf7fc7e3abaa56 378 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 8.4E-42 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 M634_13695 db17a05e2d794d265aaf7fc7e3abaa56 378 Gene3D G3DSA:1.10.8.410 329 377 3.1E-20 T 12-10-2018 M634_13695 db17a05e2d794d265aaf7fc7e3abaa56 378 Pfam PF00700 Bacterial flagellin C-terminal helical region 293 377 8.3E-26 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 M634_13695 db17a05e2d794d265aaf7fc7e3abaa56 378 SUPERFAMILY SSF64518 1 377 1.31E-95 T 12-10-2018 M634_05950 db17a05e2d794d265aaf7fc7e3abaa56 378 Pfam PF07196 Flagellin hook IN motif 195 249 6.0E-11 T 12-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 M634_05950 db17a05e2d794d265aaf7fc7e3abaa56 378 Gene3D G3DSA:1.20.1330.10 44 328 1.6E-76 T 12-10-2018 M634_05950 db17a05e2d794d265aaf7fc7e3abaa56 378 Gene3D G3DSA:3.30.70.2120 174 276 1.6E-76 T 12-10-2018 M634_05950 db17a05e2d794d265aaf7fc7e3abaa56 378 PRINTS PR00207 Flagellin signature 37 54 2.5E-27 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 M634_05950 db17a05e2d794d265aaf7fc7e3abaa56 378 PRINTS PR00207 Flagellin signature 111 134 2.5E-27 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 M634_05950 db17a05e2d794d265aaf7fc7e3abaa56 378 PRINTS PR00207 Flagellin signature 76 95 2.5E-27 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 M634_05950 db17a05e2d794d265aaf7fc7e3abaa56 378 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 8.4E-42 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 M634_05950 db17a05e2d794d265aaf7fc7e3abaa56 378 Gene3D G3DSA:1.10.8.410 329 377 3.1E-20 T 12-10-2018 M634_05950 db17a05e2d794d265aaf7fc7e3abaa56 378 Pfam PF00700 Bacterial flagellin C-terminal helical region 293 377 8.3E-26 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 M634_05950 db17a05e2d794d265aaf7fc7e3abaa56 378 SUPERFAMILY SSF64518 1 377 1.31E-95 T 12-10-2018 M634_15060 a518815ee07b586a806be0127c771a50 426 Gene3D G3DSA:3.30.465.10 340 418 6.6E-27 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 M634_15060 a518815ee07b586a806be0127c771a50 426 Gene3D G3DSA:3.10.580.10 201 330 1.3E-40 T 12-10-2018 M634_15060 a518815ee07b586a806be0127c771a50 426 Pfam PF03471 Transporter associated domain 344 418 1.3E-17 T 12-10-2018 IPR005170 Transporter-associated domain M634_15060 a518815ee07b586a806be0127c771a50 426 SMART SM01091 342 420 2.2E-24 T 12-10-2018 IPR005170 Transporter-associated domain M634_15060 a518815ee07b586a806be0127c771a50 426 Pfam PF00571 CBS domain 278 325 2.7E-5 T 12-10-2018 IPR000644 CBS domain M634_15060 a518815ee07b586a806be0127c771a50 426 Pfam PF01595 Domain of unknown function DUF21 13 181 3.2E-49 T 12-10-2018 IPR002550 CNNM, transmembrane domain M634_15060 a518815ee07b586a806be0127c771a50 426 SUPERFAMILY SSF56176 340 423 1.83E-21 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 M634_15060 a518815ee07b586a806be0127c771a50 426 SUPERFAMILY SSF54631 192 329 3.92E-24 T 12-10-2018 M634_10200 f0c6717d5b09586428c671faf9681557 421 SUPERFAMILY SSF109604 239 396 2.81E-33 T 12-10-2018 M634_10200 f0c6717d5b09586428c671faf9681557 421 SUPERFAMILY SSF109604 26 194 6.49E-17 T 12-10-2018 M634_10200 f0c6717d5b09586428c671faf9681557 421 SMART SM00471 245 380 1.3E-11 T 12-10-2018 IPR003607 HD/PDEase domain M634_10200 f0c6717d5b09586428c671faf9681557 421 SMART SM00471 31 160 2.7 T 12-10-2018 IPR003607 HD/PDEase domain M634_10200 f0c6717d5b09586428c671faf9681557 421 Gene3D G3DSA:1.10.3210.10 20 194 9.6E-20 T 12-10-2018 M634_10200 f0c6717d5b09586428c671faf9681557 421 Pfam PF01966 HD domain 37 147 1.3E-5 T 12-10-2018 IPR006674 HD domain M634_10200 f0c6717d5b09586428c671faf9681557 421 Pfam PF01966 HD domain 249 370 1.1E-18 T 12-10-2018 IPR006674 HD domain M634_10200 f0c6717d5b09586428c671faf9681557 421 Gene3D G3DSA:1.10.3210.10 195 409 3.3E-51 T 12-10-2018 M634_10200 f0c6717d5b09586428c671faf9681557 421 TIGRFAM TIGR00277 HDIG: HDIG domain 249 339 3.1E-9 T 12-10-2018 IPR006675 HDIG domain M634_22840 f9bc334a2094a87394d6a1be1be093db 854 Gene3D G3DSA:3.50.50.60 110 246 4.0E-82 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_22840 f9bc334a2094a87394d6a1be1be093db 854 PRINTS PR00397 Sirohaem Fe-binding site signature 680 698 7.3E-6 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 M634_22840 f9bc334a2094a87394d6a1be1be093db 854 PRINTS PR00397 Sirohaem Fe-binding site signature 637 655 7.3E-6 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 M634_22840 f9bc334a2094a87394d6a1be1be093db 854 Gene3D G3DSA:3.50.50.60 7 283 4.0E-82 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_22840 f9bc334a2094a87394d6a1be1be093db 854 SUPERFAMILY SSF51905 3 184 1.3E-39 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_22840 f9bc334a2094a87394d6a1be1be093db 854 SUPERFAMILY SSF56014 634 809 7.59E-47 T 12-10-2018 M634_22840 f9bc334a2094a87394d6a1be1be093db 854 Pfam PF04324 BFD-like [2Fe-2S] binding domain 424 472 2.2E-14 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain M634_22840 f9bc334a2094a87394d6a1be1be093db 854 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 680 696 - T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 M634_22840 f9bc334a2094a87394d6a1be1be093db 854 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 286 5.0E-53 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 M634_22840 f9bc334a2094a87394d6a1be1be093db 854 SUPERFAMILY SSF55124 503 630 1.74E-30 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 M634_22840 f9bc334a2094a87394d6a1be1be093db 854 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 634 773 4.4E-15 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 M634_22840 f9bc334a2094a87394d6a1be1be093db 854 Gene3D G3DSA:3.30.413.10 632 797 1.2E-31 T 12-10-2018 M634_22840 f9bc334a2094a87394d6a1be1be093db 854 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 801 0.0 T 12-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 M634_22840 f9bc334a2094a87394d6a1be1be093db 854 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 1.7E-15 T 12-10-2018 M634_22840 f9bc334a2094a87394d6a1be1be093db 854 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 1.7E-15 T 12-10-2018 M634_22840 f9bc334a2094a87394d6a1be1be093db 854 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 1.7E-15 T 12-10-2018 M634_22840 f9bc334a2094a87394d6a1be1be093db 854 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 1.7E-15 T 12-10-2018 M634_22840 f9bc334a2094a87394d6a1be1be093db 854 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.7E-15 T 12-10-2018 M634_22840 f9bc334a2094a87394d6a1be1be093db 854 Gene3D G3DSA:1.10.10.1100 424 478 2.3E-12 T 12-10-2018 M634_22840 f9bc334a2094a87394d6a1be1be093db 854 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 105 114 1.1E-10 T 12-10-2018 M634_22840 f9bc334a2094a87394d6a1be1be093db 854 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 1.1E-10 T 12-10-2018 M634_22840 f9bc334a2094a87394d6a1be1be093db 854 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 1.1E-10 T 12-10-2018 M634_22840 f9bc334a2094a87394d6a1be1be093db 854 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 1.1E-10 T 12-10-2018 M634_22840 f9bc334a2094a87394d6a1be1be093db 854 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 561 622 1.5E-9 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 M634_22840 f9bc334a2094a87394d6a1be1be093db 854 PIRSF PIRSF037149 1 836 0.0 T 12-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 M634_22840 f9bc334a2094a87394d6a1be1be093db 854 SUPERFAMILY SSF51905 144 310 9.07E-27 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_04140 f5211deaf3842acb0073fba9bce57569 121 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 7 119 1.2E-35 T 12-10-2018 IPR003509 Uncharacterised protein family UPF0102 M634_04140 f5211deaf3842acb0073fba9bce57569 121 SUPERFAMILY SSF52980 7 111 1.61E-22 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 M634_04140 f5211deaf3842acb0073fba9bce57569 121 Pfam PF02021 Uncharacterised protein family UPF0102 13 104 7.7E-29 T 12-10-2018 IPR003509 Uncharacterised protein family UPF0102 M634_04140 f5211deaf3842acb0073fba9bce57569 121 Gene3D G3DSA:3.40.1350.10 13 121 2.9E-33 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 M634_04140 f5211deaf3842acb0073fba9bce57569 121 Hamap MF_00048 UPF0102 protein YraN [yraN]. 6 117 24.326 T 12-10-2018 IPR003509 Uncharacterised protein family UPF0102 M634_07440 78f1438f40edac7a48f50ad838e6d1c2 374 SUPERFAMILY SSF51735 137 303 9.26E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_07440 78f1438f40edac7a48f50ad838e6d1c2 374 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 2.8E-83 T 12-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain M634_07440 78f1438f40edac7a48f50ad838e6d1c2 374 Gene3D G3DSA:3.40.50.720 130 305 2.0E-136 T 12-10-2018 M634_07440 78f1438f40edac7a48f50ad838e6d1c2 374 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 3.4E-46 T 12-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal M634_07440 78f1438f40edac7a48f50ad838e6d1c2 374 PIRSF PIRSF000183 1 371 1.3E-157 T 12-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 M634_07440 78f1438f40edac7a48f50ad838e6d1c2 374 SMART SM01003 4 137 2.6E-79 T 12-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal M634_07440 78f1438f40edac7a48f50ad838e6d1c2 374 SMART SM01002 149 297 6.6E-87 T 12-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain M634_07440 78f1438f40edac7a48f50ad838e6d1c2 374 SUPERFAMILY SSF52283 1 360 3.49E-67 T 12-10-2018 M634_07440 78f1438f40edac7a48f50ad838e6d1c2 374 Gene3D G3DSA:3.40.50.720 3 353 2.0E-136 T 12-10-2018 M634_07440 78f1438f40edac7a48f50ad838e6d1c2 374 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 2.8E-154 T 12-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 M634_15295 234dedc897424e6bf3a758c4f2f2dfeb 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 306.194 T 12-10-2018 IPR006297 Elongation factor 4 GO:0005525 M634_15295 234dedc897424e6bf3a758c4f2f2dfeb 597 Gene3D G3DSA:3.40.50.300 1 185 1.4E-70 T 12-10-2018 M634_15295 234dedc897424e6bf3a758c4f2f2dfeb 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site M634_15295 234dedc897424e6bf3a758c4f2f2dfeb 597 Gene3D G3DSA:3.30.70.2570 479 553 7.2E-33 T 12-10-2018 IPR038363 LepA, C-terminal domain superfamily M634_15295 234dedc897424e6bf3a758c4f2f2dfeb 597 Gene3D G3DSA:2.40.30.10 186 285 1.7E-34 T 12-10-2018 M634_15295 234dedc897424e6bf3a758c4f2f2dfeb 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 3.3E-49 T 12-10-2018 IPR013842 GTP-binding protein LepA, C-terminal M634_15295 234dedc897424e6bf3a758c4f2f2dfeb 597 SUPERFAMILY SSF52540 2 205 2.31E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_15295 234dedc897424e6bf3a758c4f2f2dfeb 597 SMART SM00838 398 486 0.0049 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like M634_15295 234dedc897424e6bf3a758c4f2f2dfeb 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 176 1.1E-16 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 M634_15295 234dedc897424e6bf3a758c4f2f2dfeb 597 Gene3D G3DSA:3.30.70.3380 368 478 3.6E-39 T 12-10-2018 M634_15295 234dedc897424e6bf3a758c4f2f2dfeb 597 SUPERFAMILY SSF54980 399 493 3.41E-24 T 12-10-2018 IPR035647 EF-G domain III/V-like M634_15295 234dedc897424e6bf3a758c4f2f2dfeb 597 Pfam PF00679 Elongation factor G C-terminus 399 482 1.5E-19 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like M634_15295 234dedc897424e6bf3a758c4f2f2dfeb 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 1.1E-9 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 M634_15295 234dedc897424e6bf3a758c4f2f2dfeb 597 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 1.9E-300 T 12-10-2018 IPR006297 Elongation factor 4 GO:0005525 M634_15295 234dedc897424e6bf3a758c4f2f2dfeb 597 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 1.5E-52 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_15295 234dedc897424e6bf3a758c4f2f2dfeb 597 SUPERFAMILY SSF54980 292 370 1.8E-18 T 12-10-2018 IPR035647 EF-G domain III/V-like M634_15295 234dedc897424e6bf3a758c4f2f2dfeb 597 SUPERFAMILY SSF50447 165 288 1.48E-29 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily M634_15295 234dedc897424e6bf3a758c4f2f2dfeb 597 Gene3D G3DSA:3.30.70.870 286 367 1.3E-35 T 12-10-2018 M634_15295 234dedc897424e6bf3a758c4f2f2dfeb 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 4.0E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_15295 234dedc897424e6bf3a758c4f2f2dfeb 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 4.0E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_15295 234dedc897424e6bf3a758c4f2f2dfeb 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 4.0E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_15295 234dedc897424e6bf3a758c4f2f2dfeb 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 4.0E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_15295 234dedc897424e6bf3a758c4f2f2dfeb 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 4.0E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_01750 d1a434040dab94dd71225b643f29601b 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 88 1.8E-5 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 M634_01750 d1a434040dab94dd71225b643f29601b 326 Pfam PF00107 Zinc-binding dehydrogenase 159 272 1.0E-10 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 M634_01750 d1a434040dab94dd71225b643f29601b 326 Gene3D G3DSA:3.90.180.10 17 325 6.1E-124 T 12-10-2018 M634_01750 d1a434040dab94dd71225b643f29601b 326 SMART SM00829 13 324 3.6E-5 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 M634_01750 d1a434040dab94dd71225b643f29601b 326 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 3 326 1.1E-139 T 12-10-2018 IPR014188 Acrylyl-CoA reductase AcuI M634_01750 d1a434040dab94dd71225b643f29601b 326 SUPERFAMILY SSF50129 2 145 5.33E-45 T 12-10-2018 IPR011032 GroES-like superfamily M634_01750 d1a434040dab94dd71225b643f29601b 326 Gene3D G3DSA:3.40.50.720 126 294 6.1E-124 T 12-10-2018 M634_01750 d1a434040dab94dd71225b643f29601b 326 SUPERFAMILY SSF51735 116 289 1.66E-34 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_00090 40995cabdb64827838deaca421c978ab 578 Gene3D G3DSA:3.90.480.20 21 423 2.4E-82 T 12-10-2018 M634_00090 40995cabdb64827838deaca421c978ab 578 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 437 564 5.3E-5 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 M634_00090 40995cabdb64827838deaca421c978ab 578 SUPERFAMILY SSF56014 435 566 4.45E-32 T 12-10-2018 M634_00090 40995cabdb64827838deaca421c978ab 578 PRINTS PR00397 Sirohaem Fe-binding site signature 485 503 4.7E-9 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 M634_00090 40995cabdb64827838deaca421c978ab 578 PRINTS PR00397 Sirohaem Fe-binding site signature 436 454 4.7E-9 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 M634_00090 40995cabdb64827838deaca421c978ab 578 SUPERFAMILY SSF55124 352 430 2.13E-21 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 M634_00090 40995cabdb64827838deaca421c978ab 578 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 84 143 1.3E-13 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 M634_00090 40995cabdb64827838deaca421c978ab 578 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 359 423 7.9E-14 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 M634_00090 40995cabdb64827838deaca421c978ab 578 Gene3D G3DSA:3.30.413.10 146 354 2.4E-82 T 12-10-2018 M634_00090 40995cabdb64827838deaca421c978ab 578 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 15 578 58.634 T 12-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 M634_00090 40995cabdb64827838deaca421c978ab 578 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 178 336 1.6E-45 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 M634_00090 40995cabdb64827838deaca421c978ab 578 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 24 566 2.8E-287 T 12-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 M634_00090 40995cabdb64827838deaca421c978ab 578 Gene3D G3DSA:3.30.413.10 432 575 1.7E-35 T 12-10-2018 M634_00090 40995cabdb64827838deaca421c978ab 578 SUPERFAMILY SSF55124 18 150 1.29E-27 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 M634_00090 40995cabdb64827838deaca421c978ab 578 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 485 501 - T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 M634_00090 40995cabdb64827838deaca421c978ab 578 SUPERFAMILY SSF56014 154 350 4.45E-58 T 12-10-2018 M634_17100 164730c722fd2c77adf6b53eb9fedec6 296 Gene3D G3DSA:3.40.190.10 102 291 1.5E-37 T 12-10-2018 M634_17100 164730c722fd2c77adf6b53eb9fedec6 296 Gene3D G3DSA:3.40.190.10 163 264 1.5E-37 T 12-10-2018 M634_17100 164730c722fd2c77adf6b53eb9fedec6 296 Pfam PF03466 LysR substrate binding domain 89 295 5.6E-28 T 12-10-2018 IPR005119 LysR, substrate-binding M634_17100 164730c722fd2c77adf6b53eb9fedec6 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 8.3E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_17100 164730c722fd2c77adf6b53eb9fedec6 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 8.3E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_17100 164730c722fd2c77adf6b53eb9fedec6 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 8.3E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_17100 164730c722fd2c77adf6b53eb9fedec6 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 1.3E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_17100 164730c722fd2c77adf6b53eb9fedec6 296 SUPERFAMILY SSF53850 90 296 2.17E-28 T 12-10-2018 M634_17100 164730c722fd2c77adf6b53eb9fedec6 296 SUPERFAMILY SSF46785 6 113 3.99E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_17100 164730c722fd2c77adf6b53eb9fedec6 296 Gene3D G3DSA:1.10.10.10 5 89 5.1E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_08065 550d5c37054ae0560090534c714e4ebc 400 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 80 2.5E-37 T 12-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 M634_08065 550d5c37054ae0560090534c714e4ebc 400 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 395 57.589 T 12-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 M634_08065 550d5c37054ae0560090534c714e4ebc 400 Pfam PF07055 Enoyl reductase FAD binding domain 326 389 2.4E-31 T 12-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 M634_08065 550d5c37054ae0560090534c714e4ebc 400 Gene3D G3DSA:3.40.50.720 1 399 6.3E-182 T 12-10-2018 M634_08065 550d5c37054ae0560090534c714e4ebc 400 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 6.3E-113 T 12-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 M634_12375 099e4f55e5c4d7cf277c10219382cd1a 1024 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 3 1024 13.209 T 12-10-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_12375 099e4f55e5c4d7cf277c10219382cd1a 1024 SMART SM00481 4 73 8.4E-6 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal M634_12375 099e4f55e5c4d7cf277c10219382cd1a 1024 Pfam PF01336 OB-fold nucleic acid binding domain 934 1004 6.5E-9 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 M634_12375 099e4f55e5c4d7cf277c10219382cd1a 1024 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 270 694 4.2E-150 T 12-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_12375 099e4f55e5c4d7cf277c10219382cd1a 1024 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 4 969 1.6E-156 T 12-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_12375 099e4f55e5c4d7cf277c10219382cd1a 1024 Pfam PF02811 PHP domain 8 99 5.2E-8 T 12-10-2018 IPR004013 PHP domain GO:0003824 M634_12375 099e4f55e5c4d7cf277c10219382cd1a 1024 Gene3D G3DSA:3.20.20.140 1 247 2.4E-37 T 12-10-2018 M634_12375 099e4f55e5c4d7cf277c10219382cd1a 1024 Pfam PF14579 Helix-hairpin-helix motif 768 855 1.6E-14 T 12-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_13785 37d655ce0f30ca1bf25c11a88432c3ec 483 SMART SM00028 306 339 45.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_13785 37d655ce0f30ca1bf25c11a88432c3ec 483 SMART SM00028 340 373 23.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_13785 37d655ce0f30ca1bf25c11a88432c3ec 483 SMART SM00028 425 458 140.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_13785 37d655ce0f30ca1bf25c11a88432c3ec 483 Pfam PF01435 Peptidase family M48 69 253 2.4E-27 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 M634_13785 37d655ce0f30ca1bf25c11a88432c3ec 483 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 3 482 40.241 T 12-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 M634_13785 37d655ce0f30ca1bf25c11a88432c3ec 483 Gene3D G3DSA:1.25.40.10 285 467 3.3E-19 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_13785 37d655ce0f30ca1bf25c11a88432c3ec 483 Pfam PF14559 Tetratricopeptide repeat 351 416 4.2E-12 T 12-10-2018 M634_13785 37d655ce0f30ca1bf25c11a88432c3ec 483 SUPERFAMILY SSF48452 310 453 6.17E-18 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_13785 37d655ce0f30ca1bf25c11a88432c3ec 483 Gene3D G3DSA:3.30.2010.10 75 147 1.2E-6 T 12-10-2018 M634_23485 34aad51357e1f36cfff09ddd45fafba1 437 SUPERFAMILY SSF55785 153 258 2.09E-22 T 12-10-2018 IPR035965 PAS domain superfamily M634_23485 34aad51357e1f36cfff09ddd45fafba1 437 SMART SM00086 216 258 0.007 T 12-10-2018 IPR001610 PAC motif M634_23485 34aad51357e1f36cfff09ddd45fafba1 437 SMART SM00086 94 136 1.7 T 12-10-2018 IPR001610 PAC motif M634_23485 34aad51357e1f36cfff09ddd45fafba1 437 SMART SM00283 247 434 2.0E-17 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_23485 34aad51357e1f36cfff09ddd45fafba1 437 Pfam PF13426 PAS domain 37 132 2.0E-11 T 12-10-2018 IPR000014 PAS domain M634_23485 34aad51357e1f36cfff09ddd45fafba1 437 Pfam PF08447 PAS fold 166 251 2.4E-14 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 M634_23485 34aad51357e1f36cfff09ddd45fafba1 437 SUPERFAMILY SSF58104 247 434 3.27E-51 T 12-10-2018 M634_23485 34aad51357e1f36cfff09ddd45fafba1 437 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 142 263 2.2E-16 T 12-10-2018 IPR000014 PAS domain M634_23485 34aad51357e1f36cfff09ddd45fafba1 437 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 36 141 6.7E-9 T 12-10-2018 IPR000014 PAS domain M634_23485 34aad51357e1f36cfff09ddd45fafba1 437 Gene3D G3DSA:3.30.450.20 21 153 5.1E-13 T 12-10-2018 M634_23485 34aad51357e1f36cfff09ddd45fafba1 437 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 292 435 2.1E-35 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_23485 34aad51357e1f36cfff09ddd45fafba1 437 SUPERFAMILY SSF55785 35 129 4.89E-13 T 12-10-2018 IPR035965 PAS domain superfamily M634_23485 34aad51357e1f36cfff09ddd45fafba1 437 SMART SM00091 19 89 0.042 T 12-10-2018 IPR000014 PAS domain M634_23485 34aad51357e1f36cfff09ddd45fafba1 437 SMART SM00091 141 211 0.022 T 12-10-2018 IPR000014 PAS domain M634_23485 34aad51357e1f36cfff09ddd45fafba1 437 Gene3D G3DSA:1.10.287.950 249 437 2.1E-48 T 12-10-2018 M634_23485 34aad51357e1f36cfff09ddd45fafba1 437 Gene3D G3DSA:3.30.450.20 154 248 1.6E-15 T 12-10-2018 M634_09400 fa4d543edbeece7616e5cbd70ed2d49a 478 SUPERFAMILY SSF53335 7 308 4.78E-63 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_09400 fa4d543edbeece7616e5cbd70ed2d49a 478 Gene3D G3DSA:2.30.130.90 310 478 7.2E-67 T 12-10-2018 M634_09400 fa4d543edbeece7616e5cbd70ed2d49a 478 Pfam PF01189 16S rRNA methyltransferase RsmB/F 111 306 1.5E-49 T 12-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 M634_09400 fa4d543edbeece7616e5cbd70ed2d49a 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 120 130 7.7E-28 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase M634_09400 fa4d543edbeece7616e5cbd70ed2d49a 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 187 199 7.7E-28 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase M634_09400 fa4d543edbeece7616e5cbd70ed2d49a 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 291 308 7.7E-28 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase M634_09400 fa4d543edbeece7616e5cbd70ed2d49a 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 237 253 7.7E-28 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase M634_09400 fa4d543edbeece7616e5cbd70ed2d49a 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 89 103 7.7E-28 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase M634_09400 fa4d543edbeece7616e5cbd70ed2d49a 478 Gene3D G3DSA:3.40.50.150 2 308 1.4E-98 T 12-10-2018 M634_09400 fa4d543edbeece7616e5cbd70ed2d49a 478 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 7 103 7.4E-29 T 12-10-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 M634_09400 fa4d543edbeece7616e5cbd70ed2d49a 478 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 5 478 65.857 T 12-10-2018 IPR023545 rRNA small subunit methyltransferase F GO:0008649 M634_09400 fa4d543edbeece7616e5cbd70ed2d49a 478 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 186 197 - T 12-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 M634_09400 fa4d543edbeece7616e5cbd70ed2d49a 478 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 420 473 1.2E-9 T 12-10-2018 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain M634_09400 fa4d543edbeece7616e5cbd70ed2d49a 478 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 40 308 8.8E-102 T 12-10-2018 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 M634_04790 12083e79c80cf0a7343b78dcdd3dad0c 232 SUPERFAMILY SSF109755 10 225 1.05E-69 T 12-10-2018 M634_04790 12083e79c80cf0a7343b78dcdd3dad0c 232 Pfam PF01895 PhoU domain 23 108 3.2E-23 T 12-10-2018 IPR026022 PhoU domain M634_04790 12083e79c80cf0a7343b78dcdd3dad0c 232 Pfam PF01895 PhoU domain 128 210 2.1E-16 T 12-10-2018 IPR026022 PhoU domain M634_04790 12083e79c80cf0a7343b78dcdd3dad0c 232 Gene3D G3DSA:1.20.58.220 2 117 5.6E-41 T 12-10-2018 IPR038078 PhoU-like domain superfamily M634_04790 12083e79c80cf0a7343b78dcdd3dad0c 232 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 10 219 3.4E-75 T 12-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 M634_04790 12083e79c80cf0a7343b78dcdd3dad0c 232 PIRSF PIRSF003107 4 223 7.4E-70 T 12-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 M634_04790 12083e79c80cf0a7343b78dcdd3dad0c 232 Gene3D G3DSA:1.20.58.220 118 230 3.1E-34 T 12-10-2018 IPR038078 PhoU-like domain superfamily M634_05315 743f7a427896b3415c6ad50cd0c83570 374 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 157 368 2.8E-55 T 12-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 M634_05315 743f7a427896b3415c6ad50cd0c83570 374 SUPERFAMILY SSF53927 14 156 2.17E-48 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 M634_05315 743f7a427896b3415c6ad50cd0c83570 374 SUPERFAMILY SSF53597 155 366 2.36E-51 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 M634_05315 743f7a427896b3415c6ad50cd0c83570 374 Pfam PF01872 RibD C-terminal domain 158 361 3.9E-46 T 12-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 M634_05315 743f7a427896b3415c6ad50cd0c83570 374 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 18 365 1.9E-124 T 12-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 M634_05315 743f7a427896b3415c6ad50cd0c83570 374 PIRSF PIRSF006769 11 372 8.3E-118 T 12-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 M634_05315 743f7a427896b3415c6ad50cd0c83570 374 Gene3D G3DSA:3.40.430.10 152 372 4.9E-63 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 M634_05315 743f7a427896b3415c6ad50cd0c83570 374 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 61 99 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 M634_05315 743f7a427896b3415c6ad50cd0c83570 374 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 15 110 2.8E-20 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain M634_05315 743f7a427896b3415c6ad50cd0c83570 374 Gene3D G3DSA:3.40.140.10 10 151 5.0E-47 T 12-10-2018 M634_07070 032b4049816e6e6587dc58ed20e126ac 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 598 612 4.8E-36 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 M634_07070 032b4049816e6e6587dc58ed20e126ac 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 494 512 4.8E-36 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 M634_07070 032b4049816e6e6587dc58ed20e126ac 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 536 554 4.8E-36 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 M634_07070 032b4049816e6e6587dc58ed20e126ac 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 565 583 4.8E-36 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 M634_07070 032b4049816e6e6587dc58ed20e126ac 756 SMART SM01086 656 745 2.4E-35 T 12-10-2018 IPR019489 Clp ATPase, C-terminal M634_07070 032b4049816e6e6587dc58ed20e126ac 756 SMART SM00382 490 657 6.4E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_07070 032b4049816e6e6587dc58ed20e126ac 756 SMART SM00382 209 354 3.7E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_07070 032b4049816e6e6587dc58ed20e126ac 756 Gene3D G3DSA:1.10.8.60 354 441 7.3E-35 T 12-10-2018 M634_07070 032b4049816e6e6587dc58ed20e126ac 756 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 9.1E-13 T 12-10-2018 IPR004176 Clp, N-terminal M634_07070 032b4049816e6e6587dc58ed20e126ac 756 SUPERFAMILY SSF81923 1 142 5.49E-59 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 M634_07070 032b4049816e6e6587dc58ed20e126ac 756 Gene3D G3DSA:1.10.8.60 656 756 2.0E-30 T 12-10-2018 M634_07070 032b4049816e6e6587dc58ed20e126ac 756 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 521 539 - T 12-10-2018 IPR028299 ClpA/B, conserved site 2 M634_07070 032b4049816e6e6587dc58ed20e126ac 756 Gene3D G3DSA:1.10.1780.10 1 143 7.5E-43 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 M634_07070 032b4049816e6e6587dc58ed20e126ac 756 SUPERFAMILY SSF52540 171 428 1.19E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_07070 032b4049816e6e6587dc58ed20e126ac 756 SUPERFAMILY SSF52540 440 742 7.77E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_07070 032b4049816e6e6587dc58ed20e126ac 756 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 305 317 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 M634_07070 032b4049816e6e6587dc58ed20e126ac 756 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 656 736 9.5E-24 T 12-10-2018 IPR019489 Clp ATPase, C-terminal M634_07070 032b4049816e6e6587dc58ed20e126ac 756 Gene3D G3DSA:3.40.50.300 442 655 1.2E-75 T 12-10-2018 M634_07070 032b4049816e6e6587dc58ed20e126ac 756 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 214 327 8.5E-12 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 M634_07070 032b4049816e6e6587dc58ed20e126ac 756 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 737 0.0 T 12-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 M634_07070 032b4049816e6e6587dc58ed20e126ac 756 Gene3D G3DSA:3.40.50.300 161 353 3.3E-62 T 12-10-2018 M634_07070 032b4049816e6e6587dc58ed20e126ac 756 Pfam PF07724 AAA domain (Cdc48 subfamily) 489 650 1.7E-47 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 M634_00680 941e51821aeb7ceccfcb15fc5236f59b 345 PIRSF PIRSF000114 10 344 2.0E-95 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 M634_00680 941e51821aeb7ceccfcb15fc5236f59b 345 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 200 221 - T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 M634_00680 941e51821aeb7ceccfcb15fc5236f59b 345 Gene3D G3DSA:1.10.1040.10 201 345 6.0E-54 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 M634_00680 941e51821aeb7ceccfcb15fc5236f59b 345 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 192 329 1.4E-52 T 12-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 M634_00680 941e51821aeb7ceccfcb15fc5236f59b 345 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 14 334 37.107 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 M634_00680 941e51821aeb7ceccfcb15fc5236f59b 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 68 95 1.3E-42 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 M634_00680 941e51821aeb7ceccfcb15fc5236f59b 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 144 164 1.3E-42 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 M634_00680 941e51821aeb7ceccfcb15fc5236f59b 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 18 35 1.3E-42 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 M634_00680 941e51821aeb7ceccfcb15fc5236f59b 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 250 267 1.3E-42 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 M634_00680 941e51821aeb7ceccfcb15fc5236f59b 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 185 209 1.3E-42 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 M634_00680 941e51821aeb7ceccfcb15fc5236f59b 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 210 234 1.3E-42 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 M634_00680 941e51821aeb7ceccfcb15fc5236f59b 345 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 16 170 2.9E-45 T 12-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 M634_00680 941e51821aeb7ceccfcb15fc5236f59b 345 SUPERFAMILY SSF51735 16 190 3.38E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_00680 941e51821aeb7ceccfcb15fc5236f59b 345 SUPERFAMILY SSF48179 191 343 1.7E-56 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 M634_00680 941e51821aeb7ceccfcb15fc5236f59b 345 Gene3D G3DSA:3.40.50.720 2 199 5.4E-51 T 12-10-2018 M634_13365 4fd68dc2fad87f95b68906f08e93da38 412 Gene3D G3DSA:3.30.1370.170 329 412 3.5E-31 T 12-10-2018 IPR038251 PdxB, dimerisation domain superfamily KEGG: 00750+1.1.1.290 M634_13365 4fd68dc2fad87f95b68906f08e93da38 412 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 145 292 1.8E-33 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 M634_13365 4fd68dc2fad87f95b68906f08e93da38 412 SUPERFAMILY SSF52283 36 144 1.81E-23 T 12-10-2018 M634_13365 4fd68dc2fad87f95b68906f08e93da38 412 Gene3D G3DSA:3.40.50.720 128 293 6.5E-113 T 12-10-2018 M634_13365 4fd68dc2fad87f95b68906f08e93da38 412 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 36 393 45.41 T 12-10-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00750+1.1.1.290 M634_13365 4fd68dc2fad87f95b68906f08e93da38 412 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 233 249 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site M634_13365 4fd68dc2fad87f95b68906f08e93da38 412 Pfam PF11890 Domain of unknown function (DUF3410) 325 405 3.9E-27 T 12-10-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00750+1.1.1.290 M634_13365 4fd68dc2fad87f95b68906f08e93da38 412 SUPERFAMILY SSF51735 128 293 2.13E-34 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_13365 4fd68dc2fad87f95b68906f08e93da38 412 Gene3D G3DSA:3.40.50.720 36 314 6.5E-113 T 12-10-2018 M634_13365 4fd68dc2fad87f95b68906f08e93da38 412 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 41 320 1.5E-23 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 M634_03790 f6657df4990f5a4a0ba2dbbc4919c856 352 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 1 349 1.4E-142 T 12-10-2018 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 KEGG: 00561+2.7.1.121 M634_03790 f6657df4990f5a4a0ba2dbbc4919c856 352 Gene3D G3DSA:3.30.1180.20 182 352 5.8E-56 T 12-10-2018 M634_03790 f6657df4990f5a4a0ba2dbbc4919c856 352 Pfam PF02733 Dak1 domain 17 348 1.1E-124 T 12-10-2018 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 M634_03790 f6657df4990f5a4a0ba2dbbc4919c856 352 Gene3D G3DSA:3.40.50.10440 11 181 2.4E-61 T 12-10-2018 M634_03790 f6657df4990f5a4a0ba2dbbc4919c856 352 SUPERFAMILY SSF82549 10 352 1.62E-124 T 12-10-2018 M634_15670 628b183cdc102458462438c2a8aa2fd1 417 Pfam PF01966 HD domain 170 290 5.2E-16 T 12-10-2018 IPR006674 HD domain M634_15670 628b183cdc102458462438c2a8aa2fd1 417 Gene3D G3DSA:1.10.3210.10 21 330 6.8E-55 T 12-10-2018 M634_15670 628b183cdc102458462438c2a8aa2fd1 417 Pfam PF11871 Domain of unknown function (DUF3391) 4 137 1.4E-30 T 12-10-2018 IPR021812 Protein of unknown function DUF3391 M634_15670 628b183cdc102458462438c2a8aa2fd1 417 SUPERFAMILY SSF109604 160 330 7.07E-27 T 12-10-2018 M634_15670 628b183cdc102458462438c2a8aa2fd1 417 SMART SM00471 164 300 2.2E-8 T 12-10-2018 IPR003607 HD/PDEase domain M634_07245 61c3c9c0b4c2f0383f599d0c26a03a5e 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 16 240 9.4E-117 T 12-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 M634_07245 61c3c9c0b4c2f0383f599d0c26a03a5e 334 Gene3D G3DSA:3.40.50.300 25 186 2.1E-40 T 12-10-2018 M634_07245 61c3c9c0b4c2f0383f599d0c26a03a5e 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 258 331 1.6E-33 T 12-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 M634_07245 61c3c9c0b4c2f0383f599d0c26a03a5e 334 Gene3D G3DSA:1.10.10.10 262 334 4.3E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_07245 61c3c9c0b4c2f0383f599d0c26a03a5e 334 SMART SM00382 56 183 4.0E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_07245 61c3c9c0b4c2f0383f599d0c26a03a5e 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 255 332 5.0E-39 T 12-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 M634_07245 61c3c9c0b4c2f0383f599d0c26a03a5e 334 SUPERFAMILY SSF46785 262 332 1.9E-25 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_07245 61c3c9c0b4c2f0383f599d0c26a03a5e 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 28 331 2.6E-147 T 12-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 M634_07245 61c3c9c0b4c2f0383f599d0c26a03a5e 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 182.514 T 12-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 M634_07245 61c3c9c0b4c2f0383f599d0c26a03a5e 334 Gene3D G3DSA:1.10.8.60 187 260 4.8E-31 T 12-10-2018 M634_07245 61c3c9c0b4c2f0383f599d0c26a03a5e 334 SUPERFAMILY SSF52540 25 256 7.04E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_08195 3f01b8159d2a3f2c640da092831f0c9c 784 Pfam PF00270 DEAD/DEAH box helicase 16 151 1.5E-8 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 M634_08195 3f01b8159d2a3f2c640da092831f0c9c 784 SMART SM00490 219 315 6.5E-15 T 12-10-2018 IPR001650 Helicase, C-terminal M634_08195 3f01b8159d2a3f2c640da092831f0c9c 784 Pfam PF04408 Helicase associated domain (HA2) 373 443 1.5E-7 T 12-10-2018 IPR007502 Helicase-associated domain GO:0004386 M634_08195 3f01b8159d2a3f2c640da092831f0c9c 784 SMART SM00847 372 460 0.0023 T 12-10-2018 IPR007502 Helicase-associated domain GO:0004386 M634_08195 3f01b8159d2a3f2c640da092831f0c9c 784 SMART SM00487 2 176 4.3E-13 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M634_08195 3f01b8159d2a3f2c640da092831f0c9c 784 Gene3D G3DSA:3.40.50.300 168 331 3.6E-44 T 12-10-2018 M634_08195 3f01b8159d2a3f2c640da092831f0c9c 784 Gene3D G3DSA:1.20.120.1080 355 451 4.1E-8 T 12-10-2018 M634_08195 3f01b8159d2a3f2c640da092831f0c9c 784 Gene3D G3DSA:3.40.50.300 2 162 1.1E-41 T 12-10-2018 M634_08195 3f01b8159d2a3f2c640da092831f0c9c 784 SUPERFAMILY SSF52540 18 326 9.67E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_08195 3f01b8159d2a3f2c640da092831f0c9c 784 Pfam PF00271 Helicase conserved C-terminal domain 195 314 3.5E-15 T 12-10-2018 IPR001650 Helicase, C-terminal M634_09005 3dbd50f1bb335a8e531c7040e7630f0b 142 Pfam PF05932 Tir chaperone protein (CesT) family 4 123 2.0E-26 T 12-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 M634_09005 3dbd50f1bb335a8e531c7040e7630f0b 142 Gene3D G3DSA:3.30.1460.10 2 128 4.4E-26 T 12-10-2018 M634_09005 3dbd50f1bb335a8e531c7040e7630f0b 142 SUPERFAMILY SSF69635 3 128 2.32E-51 T 12-10-2018 M634_09005 3dbd50f1bb335a8e531c7040e7630f0b 142 TIGRFAM TIGR02513 type_III_yscB: type III secretion system chaperone, YscB family 3 142 1.5E-62 T 12-10-2018 IPR013353 Type III secretion system chaperone YscB M634_06255 c83b318316a807d22c13a5d87739508c 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 12-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 M634_06255 c83b318316a807d22c13a5d87739508c 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.209 T 12-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 M634_06255 c83b318316a807d22c13a5d87739508c 388 Pfam PF08442 ATP-grasp domain 2 203 3.7E-79 T 12-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 M634_06255 c83b318316a807d22c13a5d87739508c 388 Gene3D G3DSA:3.40.50.261 240 388 1.1E-56 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 M634_06255 c83b318316a807d22c13a5d87739508c 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 4.0E-174 T 12-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 M634_06255 c83b318316a807d22c13a5d87739508c 388 Gene3D G3DSA:3.30.470.20 1 234 5.2E-92 T 12-10-2018 M634_06255 c83b318316a807d22c13a5d87739508c 388 SUPERFAMILY SSF56059 1 238 7.81E-79 T 12-10-2018 M634_06255 c83b318316a807d22c13a5d87739508c 388 Pfam PF00549 CoA-ligase 262 382 5.5E-25 T 12-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 M634_06255 c83b318316a807d22c13a5d87739508c 388 SUPERFAMILY SSF52210 239 385 2.35E-54 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 M634_06255 c83b318316a807d22c13a5d87739508c 388 Gene3D G3DSA:3.30.1490.20 21 104 5.2E-92 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 M634_06255 c83b318316a807d22c13a5d87739508c 388 PIRSF PIRSF001554 1 388 3.8E-154 T 12-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 M634_05490 4a5a1f9232f9b35bed621ca0806203c2 321 Pfam PF04055 Radical SAM superfamily 91 251 3.5E-18 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 M634_05490 4a5a1f9232f9b35bed621ca0806203c2 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 319 1.8E-149 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 M634_05490 4a5a1f9232f9b35bed621ca0806203c2 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 25 73 7.1E-8 T 12-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 M634_05490 4a5a1f9232f9b35bed621ca0806203c2 321 PIRSF PIRSF005963 1 321 1.1E-128 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 M634_05490 4a5a1f9232f9b35bed621ca0806203c2 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 155.548 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 M634_05490 4a5a1f9232f9b35bed621ca0806203c2 321 SUPERFAMILY SSF102114 52 315 5.62E-68 T 12-10-2018 M634_05490 4a5a1f9232f9b35bed621ca0806203c2 321 Gene3D G3DSA:3.20.20.70 49 293 1.7E-22 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_05490 4a5a1f9232f9b35bed621ca0806203c2 321 SMART SM00729 84 293 2.5E-19 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 M634_04360 4ae43e99149ece3f6e7f743c75066dea 819 Gene3D G3DSA:3.30.360.10 625 795 1.0E-120 T 12-10-2018 M634_04360 4ae43e99149ece3f6e7f743c75066dea 819 Pfam PF01842 ACT domain 324 379 1.5E-9 T 12-10-2018 IPR002912 ACT domain M634_04360 4ae43e99149ece3f6e7f743c75066dea 819 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 606 2.7E-27 T 12-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 M634_04360 4ae43e99149ece3f6e7f743c75066dea 819 SUPERFAMILY SSF55021 383 476 7.45E-22 T 12-10-2018 M634_04360 4ae43e99149ece3f6e7f743c75066dea 819 PIRSF PIRSF000727 1 817 0.0 T 12-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 M634_04360 4ae43e99149ece3f6e7f743c75066dea 819 SUPERFAMILY SSF53633 1 298 3.33E-77 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily M634_04360 4ae43e99149ece3f6e7f743c75066dea 819 Gene3D G3DSA:3.30.2130.10 302 463 6.2E-46 T 12-10-2018 M634_04360 4ae43e99149ece3f6e7f743c75066dea 819 Gene3D G3DSA:3.40.50.720 467 811 1.0E-120 T 12-10-2018 M634_04360 4ae43e99149ece3f6e7f743c75066dea 819 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 5.4E-132 T 12-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 M634_04360 4ae43e99149ece3f6e7f743c75066dea 819 Pfam PF13840 ACT domain 394 456 2.7E-7 T 12-10-2018 IPR027795 CASTOR, ACT domain M634_04360 4ae43e99149ece3f6e7f743c75066dea 819 Pfam PF00742 Homoserine dehydrogenase 614 810 7.3E-47 T 12-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 M634_04360 4ae43e99149ece3f6e7f743c75066dea 819 SUPERFAMILY SSF55021 303 381 1.32E-22 T 12-10-2018 M634_04360 4ae43e99149ece3f6e7f743c75066dea 819 Gene3D G3DSA:1.20.120.1320 41 142 1.4E-87 T 12-10-2018 M634_04360 4ae43e99149ece3f6e7f743c75066dea 819 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 12-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 M634_04360 4ae43e99149ece3f6e7f743c75066dea 819 SUPERFAMILY SSF51735 465 636 3.94E-38 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_04360 4ae43e99149ece3f6e7f743c75066dea 819 SUPERFAMILY SSF55347 614 797 3.6E-51 T 12-10-2018 M634_04360 4ae43e99149ece3f6e7f743c75066dea 819 Gene3D G3DSA:3.40.1160.10 3 295 1.4E-87 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily M634_04360 4ae43e99149ece3f6e7f743c75066dea 819 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 12-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 M634_04360 4ae43e99149ece3f6e7f743c75066dea 819 Pfam PF00696 Amino acid kinase family 2 284 1.3E-51 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 M634_01125 70cad764e43df79e6e3885ce8ebdcf85 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.8E-14 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 M634_01125 70cad764e43df79e6e3885ce8ebdcf85 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 2.1E-231 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 M634_01125 70cad764e43df79e6e3885ce8ebdcf85 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site M634_01125 70cad764e43df79e6e3885ce8ebdcf85 394 SUPERFAMILY SSF50447 205 301 3.73E-29 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily M634_01125 70cad764e43df79e6e3885ce8ebdcf85 394 Gene3D G3DSA:2.40.30.10 206 334 1.8E-52 T 12-10-2018 M634_01125 70cad764e43df79e6e3885ce8ebdcf85 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 2.8E-33 T 12-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal M634_01125 70cad764e43df79e6e3885ce8ebdcf85 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.796 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 M634_01125 70cad764e43df79e6e3885ce8ebdcf85 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 2.1E-58 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_01125 70cad764e43df79e6e3885ce8ebdcf85 394 SUPERFAMILY SSF50465 298 393 1.61E-35 T 12-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal M634_01125 70cad764e43df79e6e3885ce8ebdcf85 394 Gene3D G3DSA:2.40.30.10 338 393 7.4E-29 T 12-10-2018 M634_01125 70cad764e43df79e6e3885ce8ebdcf85 394 Gene3D G3DSA:3.40.50.300 1 203 4.0E-70 T 12-10-2018 M634_01125 70cad764e43df79e6e3885ce8ebdcf85 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 1.0E-15 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 M634_01125 70cad764e43df79e6e3885ce8ebdcf85 394 SUPERFAMILY SSF52540 6 219 5.86E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_01125 70cad764e43df79e6e3885ce8ebdcf85 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.7E-23 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_01125 70cad764e43df79e6e3885ce8ebdcf85 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.7E-23 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_01125 70cad764e43df79e6e3885ce8ebdcf85 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-23 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_01125 70cad764e43df79e6e3885ce8ebdcf85 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.7E-23 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_01125 70cad764e43df79e6e3885ce8ebdcf85 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.7E-23 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_20350 542aebe4512f5d3fc9e7a24caba866af 425 Pfam PF07969 Amidohydrolase family 42 403 6.6E-58 T 12-10-2018 IPR013108 Amidohydrolase 3 M634_20350 542aebe4512f5d3fc9e7a24caba866af 425 Gene3D G3DSA:2.30.40.10 8 409 8.4E-178 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 M634_20350 542aebe4512f5d3fc9e7a24caba866af 425 SUPERFAMILY SSF51338 1 76 5.61E-8 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 M634_20350 542aebe4512f5d3fc9e7a24caba866af 425 Gene3D G3DSA:3.20.20.140 55 362 8.4E-178 T 12-10-2018 M634_20350 542aebe4512f5d3fc9e7a24caba866af 425 SUPERFAMILY SSF51556 54 372 2.3E-106 T 12-10-2018 IPR032466 Metal-dependent hydrolase M634_15165 ffe6ff8b09ff72bf2465c780a340fdbb 860 SUPERFAMILY SSF101353 255 460 4.45E-60 T 12-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 M634_15165 ffe6ff8b09ff72bf2465c780a340fdbb 860 SUPERFAMILY SSF55681 3 254 1.34E-108 T 12-10-2018 M634_15165 ffe6ff8b09ff72bf2465c780a340fdbb 860 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 839 0.0 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 M634_15165 ffe6ff8b09ff72bf2465c780a340fdbb 860 Gene3D G3DSA:3.30.930.10 2 251 3.3E-120 T 12-10-2018 M634_15165 ffe6ff8b09ff72bf2465c780a340fdbb 860 SMART SM00863 652 695 1.4E-22 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 M634_15165 ffe6ff8b09ff72bf2465c780a340fdbb 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 4.6E-31 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 M634_15165 ffe6ff8b09ff72bf2465c780a340fdbb 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 208 219 4.6E-31 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 M634_15165 ffe6ff8b09ff72bf2465c780a340fdbb 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 281 297 4.6E-31 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 M634_15165 ffe6ff8b09ff72bf2465c780a340fdbb 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 235 248 4.6E-31 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 M634_15165 ffe6ff8b09ff72bf2465c780a340fdbb 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 305 318 4.6E-31 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 M634_15165 ffe6ff8b09ff72bf2465c780a340fdbb 860 Pfam PF02272 DHHA1 domain 722 854 2.2E-28 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 M634_15165 ffe6ff8b09ff72bf2465c780a340fdbb 860 Gene3D G3DSA:3.30.54.20 623 676 9.2E-52 T 12-10-2018 M634_15165 ffe6ff8b09ff72bf2465c780a340fdbb 860 Gene3D G3DSA:3.10.310.40 749 857 2.7E-34 T 12-10-2018 M634_15165 ffe6ff8b09ff72bf2465c780a340fdbb 860 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 652 695 2.9E-19 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 M634_15165 ffe6ff8b09ff72bf2465c780a340fdbb 860 SUPERFAMILY SSF50447 454 551 1.38E-17 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily M634_15165 ffe6ff8b09ff72bf2465c780a340fdbb 860 Pfam PF01411 tRNA synthetases class II (A) 7 555 1.2E-224 T 12-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 M634_15165 ffe6ff8b09ff72bf2465c780a340fdbb 860 Gene3D G3DSA:2.40.30.130 463 551 5.8E-10 T 12-10-2018 M634_15165 ffe6ff8b09ff72bf2465c780a340fdbb 860 Gene3D G3DSA:3.30.980.10 562 696 9.2E-52 T 12-10-2018 M634_15165 ffe6ff8b09ff72bf2465c780a340fdbb 860 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 860 198.855 T 12-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 M634_15165 ffe6ff8b09ff72bf2465c780a340fdbb 860 SUPERFAMILY SSF55186 551 710 7.19E-54 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 M634_20570 f55104da05038837659cda1f3d49b80c 161 Gene3D G3DSA:3.30.70.20 30 82 2.5E-10 T 12-10-2018 M634_20570 f55104da05038837659cda1f3d49b80c 161 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 139 150 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M634_20570 f55104da05038837659cda1f3d49b80c 161 Pfam PF12838 4Fe-4S dicluster domain 35 78 2.9E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M634_20570 f55104da05038837659cda1f3d49b80c 161 Pfam PF12838 4Fe-4S dicluster domain 106 151 2.4E-7 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M634_20570 f55104da05038837659cda1f3d49b80c 161 Hamap MF_02201 Ferredoxin-type protein NapF [napF]. 23 160 23.579 T 12-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 M634_20570 f55104da05038837659cda1f3d49b80c 161 Gene3D G3DSA:3.30.70.20 92 158 1.2E-9 T 12-10-2018 M634_20570 f55104da05038837659cda1f3d49b80c 161 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 16 154 1.9E-42 T 12-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 M634_20570 f55104da05038837659cda1f3d49b80c 161 SUPERFAMILY SSF54862 32 158 1.67E-18 T 12-10-2018 M634_08430 eb302806bb0f361e616365baee5b6c1d 347 Gene3D G3DSA:3.40.50.10210 50 328 5.0E-120 T 12-10-2018 M634_08430 eb302806bb0f361e616365baee5b6c1d 347 Gene3D G3DSA:1.10.1610.10 12 345 5.0E-120 T 12-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 M634_08430 eb302806bb0f361e616365baee5b6c1d 347 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 1 347 35.527 T 12-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 M634_08430 eb302806bb0f361e616365baee5b6c1d 347 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 3 345 2.9E-128 T 12-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 M634_08430 eb302806bb0f361e616365baee5b6c1d 347 SUPERFAMILY SSF52733 2 346 3.92E-111 T 12-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 M634_08430 eb302806bb0f361e616365baee5b6c1d 347 Pfam PF02277 Phosphoribosyltransferase 2 345 7.2E-126 T 12-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 M634_18925 518ab2410850f61f81cd2d19be1baaad 331 SUPERFAMILY SSF56935 22 331 7.63E-43 T 12-10-2018 M634_18925 518ab2410850f61f81cd2d19be1baaad 331 Gene3D G3DSA:2.40.160.10 22 331 4.1E-43 T 12-10-2018 IPR023614 Porin domain superfamily M634_18925 518ab2410850f61f81cd2d19be1baaad 331 PRINTS PR00183 E.coli/Salmonella-type porin signature 295 314 6.0E-5 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 M634_18925 518ab2410850f61f81cd2d19be1baaad 331 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 6.0E-5 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 M634_18925 518ab2410850f61f81cd2d19be1baaad 331 PRINTS PR00183 E.coli/Salmonella-type porin signature 93 115 6.0E-5 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 M634_02010 0612d2a068077947239a5e09980172c6 328 SUPERFAMILY SSF56112 5 328 5.23E-91 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily M634_02010 0612d2a068077947239a5e09980172c6 328 Gene3D G3DSA:1.20.1270.170 149 307 6.3E-124 T 12-10-2018 M634_02010 0612d2a068077947239a5e09980172c6 328 Gene3D G3DSA:3.30.200.70 13 108 6.3E-124 T 12-10-2018 M634_02010 0612d2a068077947239a5e09980172c6 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 46.798 T 12-10-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 M634_02010 0612d2a068077947239a5e09980172c6 328 Pfam PF01636 Phosphotransferase enzyme family 35 256 1.6E-41 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase M634_02010 0612d2a068077947239a5e09980172c6 328 Gene3D G3DSA:1.10.510.10 60 258 6.3E-124 T 12-10-2018 M634_23360 e301e16b85ae5f47a4a0d004deb59a53 247 SMART SM00382 32 223 3.8E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_23360 e301e16b85ae5f47a4a0d004deb59a53 247 SUPERFAMILY SSF52540 8 240 1.73E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_23360 e301e16b85ae5f47a4a0d004deb59a53 247 Gene3D G3DSA:3.40.50.300 4 247 2.3E-72 T 12-10-2018 M634_23360 e301e16b85ae5f47a4a0d004deb59a53 247 Pfam PF00005 ABC transporter 23 175 1.3E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_23360 e301e16b85ae5f47a4a0d004deb59a53 247 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_23360 e301e16b85ae5f47a4a0d004deb59a53 247 PIRSF PIRSF039085 5 247 1.1E-91 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 M634_16490 2f43ebbbc24d466d0773b0321a4be130 466 Pfam PF02397 Bacterial sugar transferase 276 458 6.8E-67 T 12-10-2018 IPR003362 Bacterial sugar transferase M634_16490 2f43ebbbc24d466d0773b0321a4be130 466 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 21 466 1.0E-153 T 12-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase M634_16490 2f43ebbbc24d466d0773b0321a4be130 466 Pfam PF13727 CoA-binding domain 66 240 6.9E-39 T 12-10-2018 M634_16490 2f43ebbbc24d466d0773b0321a4be130 466 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 24 466 9.8E-172 T 12-10-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 M634_16490 2f43ebbbc24d466d0773b0321a4be130 466 Gene3D G3DSA:3.40.50.720 142 264 4.6E-12 T 12-10-2018 M634_16490 2f43ebbbc24d466d0773b0321a4be130 466 SUPERFAMILY SSF51735 143 269 1.14E-5 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_04245 c93dadaefd81d114945f85e754afcb2a 379 Gene3D G3DSA:3.50.30.20 2 151 2.8E-62 T 12-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M634_04245 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.2E-5 T 12-10-2018 M634_04245 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.2E-5 T 12-10-2018 M634_04245 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.2E-5 T 12-10-2018 M634_04245 c93dadaefd81d114945f85e754afcb2a 379 SUPERFAMILY SSF52317 153 377 2.14E-63 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M634_04245 c93dadaefd81d114945f85e754afcb2a 379 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 48.871 T 12-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M634_04245 c93dadaefd81d114945f85e754afcb2a 379 Gene3D G3DSA:3.40.50.880 152 378 9.2E-77 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M634_04245 c93dadaefd81d114945f85e754afcb2a 379 Pfam PF00117 Glutamine amidotransferase class-I 197 372 3.1E-47 T 12-10-2018 IPR017926 Glutamine amidotransferase M634_04245 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 3.9E-11 T 12-10-2018 M634_04245 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 3.9E-11 T 12-10-2018 M634_04245 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 3.9E-11 T 12-10-2018 M634_04245 c93dadaefd81d114945f85e754afcb2a 379 SMART SM01097 3 133 3.8E-93 T 12-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M634_04245 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 1.4E-39 T 12-10-2018 M634_04245 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 1.4E-39 T 12-10-2018 M634_04245 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 1.4E-39 T 12-10-2018 M634_04245 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 1.4E-39 T 12-10-2018 M634_04245 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 1.4E-39 T 12-10-2018 M634_04245 c93dadaefd81d114945f85e754afcb2a 379 SUPERFAMILY SSF52021 5 142 7.06E-58 T 12-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M634_04245 c93dadaefd81d114945f85e754afcb2a 379 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 376 1.8E-150 T 12-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M634_04245 c93dadaefd81d114945f85e754afcb2a 379 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 4.0E-53 T 12-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M634_10270 c545708bb87aca226b1482cc04739d0c 241 Pfam PF14559 Tetratricopeptide repeat 154 197 1.0E-5 T 12-10-2018 M634_10270 c545708bb87aca226b1482cc04739d0c 241 Pfam PF13431 Tetratricopeptide repeat 95 127 1.6E-6 T 12-10-2018 M634_10270 c545708bb87aca226b1482cc04739d0c 241 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 10 239 5.3E-80 T 12-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW M634_10270 c545708bb87aca226b1482cc04739d0c 241 SMART SM00028 73 106 6.6 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_10270 c545708bb87aca226b1482cc04739d0c 241 SMART SM00028 143 176 0.66 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_10270 c545708bb87aca226b1482cc04739d0c 241 SMART SM00028 107 140 46.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_10270 c545708bb87aca226b1482cc04739d0c 241 SMART SM00028 39 72 42.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_10270 c545708bb87aca226b1482cc04739d0c 241 SUPERFAMILY SSF81901 34 200 7.59E-21 T 12-10-2018 M634_10270 c545708bb87aca226b1482cc04739d0c 241 Gene3D G3DSA:1.25.40.10 37 241 6.0E-37 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_08215 26d1caeb155fe76e9352c988416944e1 367 Pfam PF01259 SAICAR synthetase 22 293 1.4E-48 T 12-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 M634_08215 26d1caeb155fe76e9352c988416944e1 367 Gene3D G3DSA:3.30.200.20 12 129 2.0E-24 T 12-10-2018 M634_08215 26d1caeb155fe76e9352c988416944e1 367 TIGRFAM TIGR02735 purC_vibrio: phosphoribosylaminoimidazole-succinocarboxamide synthase 2 366 8.1E-215 T 12-10-2018 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 M634_08215 26d1caeb155fe76e9352c988416944e1 367 Gene3D G3DSA:3.30.470.20 130 292 4.6E-16 T 12-10-2018 M634_08215 26d1caeb155fe76e9352c988416944e1 367 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 19 342 21.738 T 12-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 M634_08215 26d1caeb155fe76e9352c988416944e1 367 ProSitePatterns PS01057 SAICAR synthetase signature 1. 124 138 - T 12-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 M634_08215 26d1caeb155fe76e9352c988416944e1 367 SUPERFAMILY SSF56104 14 343 1.11E-67 T 12-10-2018 M634_22325 23ea31a8561ecef0837c26a1f91ca158 636 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 202 359 2.9E-11 T 12-10-2018 IPR000160 GGDEF domain M634_22325 23ea31a8561ecef0837c26a1f91ca158 636 SMART SM00052 372 617 2.4E-96 T 12-10-2018 IPR001633 EAL domain M634_22325 23ea31a8561ecef0837c26a1f91ca158 636 Gene3D G3DSA:3.30.450.40 12 166 3.2E-11 T 12-10-2018 IPR029016 GAF-like domain superfamily M634_22325 23ea31a8561ecef0837c26a1f91ca158 636 SMART SM00065 14 161 1.6E-8 T 12-10-2018 IPR003018 GAF domain GO:0005515 M634_22325 23ea31a8561ecef0837c26a1f91ca158 636 Pfam PF13185 GAF domain 42 143 1.5E-7 T 12-10-2018 IPR003018 GAF domain GO:0005515 M634_22325 23ea31a8561ecef0837c26a1f91ca158 636 SMART SM00267 192 362 6.7E-8 T 12-10-2018 IPR000160 GGDEF domain M634_22325 23ea31a8561ecef0837c26a1f91ca158 636 SUPERFAMILY SSF141868 377 626 1.44E-83 T 12-10-2018 IPR035919 EAL domain superfamily M634_22325 23ea31a8561ecef0837c26a1f91ca158 636 Gene3D G3DSA:3.20.20.450 371 630 2.7E-88 T 12-10-2018 IPR035919 EAL domain superfamily M634_22325 23ea31a8561ecef0837c26a1f91ca158 636 Gene3D G3DSA:3.30.70.270 189 362 1.0E-18 T 12-10-2018 M634_22325 23ea31a8561ecef0837c26a1f91ca158 636 Pfam PF00990 Diguanylate cyclase, GGDEF domain 204 356 1.5E-13 T 12-10-2018 IPR000160 GGDEF domain M634_22325 23ea31a8561ecef0837c26a1f91ca158 636 SUPERFAMILY SSF55073 209 363 1.26E-17 T 12-10-2018 IPR029787 Nucleotide cyclase M634_22325 23ea31a8561ecef0837c26a1f91ca158 636 SUPERFAMILY SSF55781 15 158 4.32E-19 T 12-10-2018 M634_22325 23ea31a8561ecef0837c26a1f91ca158 636 Pfam PF00563 EAL domain 380 612 9.5E-69 T 12-10-2018 IPR001633 EAL domain M634_14700 3f6bd6c0e631ddb81f4967b3ba4ce590 659 SUPERFAMILY SSF52540 144 392 9.3E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_14700 3f6bd6c0e631ddb81f4967b3ba4ce590 659 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 102 594 5.5E-244 T 12-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 M634_14700 3f6bd6c0e631ddb81f4967b3ba4ce590 659 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 631 37.392 T 12-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 M634_14700 3f6bd6c0e631ddb81f4967b3ba4ce590 659 SUPERFAMILY SSF140990 403 597 3.14E-76 T 12-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 M634_14700 3f6bd6c0e631ddb81f4967b3ba4ce590 659 Gene3D G3DSA:1.10.8.60 324 397 2.1E-27 T 12-10-2018 M634_14700 3f6bd6c0e631ddb81f4967b3ba4ce590 659 ProSitePatterns PS00674 AAA-protein family signature. 292 310 - T 12-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 M634_14700 3f6bd6c0e631ddb81f4967b3ba4ce590 659 Pfam PF06480 FtsH Extracellular 5 94 1.0E-11 T 12-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 M634_14700 3f6bd6c0e631ddb81f4967b3ba4ce590 659 SMART SM00382 185 324 5.1E-26 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_14700 3f6bd6c0e631ddb81f4967b3ba4ce590 659 Pfam PF01434 Peptidase family M41 383 592 1.3E-82 T 12-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 M634_14700 3f6bd6c0e631ddb81f4967b3ba4ce590 659 Gene3D G3DSA:1.20.58.760 398 602 2.4E-73 T 12-10-2018 M634_14700 3f6bd6c0e631ddb81f4967b3ba4ce590 659 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 189 321 5.2E-46 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 M634_14700 3f6bd6c0e631ddb81f4967b3ba4ce590 659 Gene3D G3DSA:3.40.50.300 137 323 3.0E-70 T 12-10-2018 M634_14700 3f6bd6c0e631ddb81f4967b3ba4ce590 659 Gene3D G3DSA:2.40.50.920 24 100 3.5E-29 T 12-10-2018 M634_01205 6290c3aeaecea6df82f93532ac9c75b5 270 SUPERFAMILY SSF53681 112 261 3.27E-33 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 M634_01205 6290c3aeaecea6df82f93532ac9c75b5 270 SUPERFAMILY SSF53681 8 108 3.92E-31 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 M634_01205 6290c3aeaecea6df82f93532ac9c75b5 270 Gene3D G3DSA:3.40.50.1860 99 208 8.5E-83 T 12-10-2018 M634_01205 6290c3aeaecea6df82f93532ac9c75b5 270 Hamap MF_00258 Glutamate racemase [murI]. 7 255 32.31 T 12-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 M634_01205 6290c3aeaecea6df82f93532ac9c75b5 270 TIGRFAM TIGR00067 glut_race: glutamate racemase 9 231 1.1E-68 T 12-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 M634_01205 6290c3aeaecea6df82f93532ac9c75b5 270 Pfam PF01177 Asp/Glu/Hydantoin racemase 11 215 1.9E-25 T 12-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 M634_01205 6290c3aeaecea6df82f93532ac9c75b5 270 Gene3D G3DSA:3.40.50.1860 11 237 8.5E-83 T 12-10-2018 M634_01205 6290c3aeaecea6df82f93532ac9c75b5 270 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 74 82 - T 12-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 M634_06205 7b6a1a50f15f398170dd6ccdcbc6bad2 548 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 5.6E-18 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_06205 7b6a1a50f15f398170dd6ccdcbc6bad2 548 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 543 0.0 T 12-10-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-6981|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7900|MetaCyc: PWY-7902 M634_06205 7b6a1a50f15f398170dd6ccdcbc6bad2 548 SUPERFAMILY SSF53738 209 317 2.59E-8 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_06205 7b6a1a50f15f398170dd6ccdcbc6bad2 548 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 180 1.4E-40 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_06205 7b6a1a50f15f398170dd6ccdcbc6bad2 548 Gene3D G3DSA:3.40.120.10 221 318 4.2E-45 T 12-10-2018 M634_06205 7b6a1a50f15f398170dd6ccdcbc6bad2 548 Gene3D G3DSA:3.40.120.10 12 218 1.4E-75 T 12-10-2018 M634_06205 7b6a1a50f15f398170dd6ccdcbc6bad2 548 SUPERFAMILY SSF53738 305 446 6.67E-31 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_06205 7b6a1a50f15f398170dd6ccdcbc6bad2 548 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 438 3.0E-28 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_06205 7b6a1a50f15f398170dd6ccdcbc6bad2 548 Gene3D G3DSA:3.30.310.50 443 546 1.5E-35 T 12-10-2018 M634_06205 7b6a1a50f15f398170dd6ccdcbc6bad2 548 SUPERFAMILY SSF55957 433 543 1.26E-20 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_06205 7b6a1a50f15f398170dd6ccdcbc6bad2 548 Gene3D G3DSA:3.40.120.10 319 442 5.8E-35 T 12-10-2018 M634_06205 7b6a1a50f15f398170dd6ccdcbc6bad2 548 SUPERFAMILY SSF53738 27 235 3.3E-52 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_06205 7b6a1a50f15f398170dd6ccdcbc6bad2 548 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 490 537 9.3E-9 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_06205 7b6a1a50f15f398170dd6ccdcbc6bad2 548 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 12-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_14320 e85b8ae1a431f3285a019ffd56555e6a 263 SUPERFAMILY SSF100950 74 234 5.39E-29 T 12-10-2018 IPR037171 NagB/RpiA transferase-like M634_14320 e85b8ae1a431f3285a019ffd56555e6a 263 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 M634_14320 e85b8ae1a431f3285a019ffd56555e6a 263 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.7E-12 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 M634_14320 e85b8ae1a431f3285a019ffd56555e6a 263 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.7E-12 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 M634_14320 e85b8ae1a431f3285a019ffd56555e6a 263 Gene3D G3DSA:1.10.10.10 1 67 1.9E-8 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_14320 e85b8ae1a431f3285a019ffd56555e6a 263 SUPERFAMILY SSF46785 5 77 4.94E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_14320 e85b8ae1a431f3285a019ffd56555e6a 263 Pfam PF00455 DeoR C terminal sensor domain 74 232 3.8E-50 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain M634_14320 e85b8ae1a431f3285a019ffd56555e6a 263 SMART SM00420 6 58 1.2E-27 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 M634_14320 e85b8ae1a431f3285a019ffd56555e6a 263 Gene3D G3DSA:3.30.750.70 71 130 4.9E-8 T 12-10-2018 M634_14320 e85b8ae1a431f3285a019ffd56555e6a 263 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 6.6E-24 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 M634_14320 e85b8ae1a431f3285a019ffd56555e6a 263 SMART SM01134 72 234 8.8E-68 T 12-10-2018 M634_03705 5e88eb03cba576c385d8b701973282a7 515 Gene3D G3DSA:1.10.238.260 280 393 4.3E-32 T 12-10-2018 M634_03705 5e88eb03cba576c385d8b701973282a7 515 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 498 1.4E-29 T 12-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 M634_03705 5e88eb03cba576c385d8b701973282a7 515 Gene3D G3DSA:3.30.160.270 394 500 1.3E-6 T 12-10-2018 M634_03705 5e88eb03cba576c385d8b701973282a7 515 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 M634_03705 5e88eb03cba576c385d8b701973282a7 515 Pfam PF00682 HMGL-like 4 273 1.6E-100 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 M634_03705 5e88eb03cba576c385d8b701973282a7 515 Gene3D G3DSA:3.20.20.70 1 277 3.9E-107 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_03705 5e88eb03cba576c385d8b701973282a7 515 SUPERFAMILY SSF51569 1 291 1.04E-100 T 12-10-2018 M634_03705 5e88eb03cba576c385d8b701973282a7 515 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 496 3.5E-237 T 12-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 M634_03705 5e88eb03cba576c385d8b701973282a7 515 SUPERFAMILY SSF110921 393 498 3.01E-20 T 12-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 M634_03705 5e88eb03cba576c385d8b701973282a7 515 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 M634_03705 5e88eb03cba576c385d8b701973282a7 515 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 508 42.295 T 12-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 M634_03705 5e88eb03cba576c385d8b701973282a7 515 SMART SM00917 369 499 2.0E-26 T 12-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 M634_20165 678cf009a19137388c7bc6508cd5bfbc 188 Gene3D G3DSA:1.10.357.10 6 172 1.3E-23 T 12-10-2018 M634_20165 678cf009a19137388c7bc6508cd5bfbc 188 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 79 156 9.1E-6 T 12-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 M634_20165 678cf009a19137388c7bc6508cd5bfbc 188 SUPERFAMILY SSF48498 83 159 4.78E-7 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily M634_20165 678cf009a19137388c7bc6508cd5bfbc 188 SUPERFAMILY SSF46689 20 78 2.98E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_20165 678cf009a19137388c7bc6508cd5bfbc 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 2.6E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M634_20165 678cf009a19137388c7bc6508cd5bfbc 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 2.6E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M634_20165 678cf009a19137388c7bc6508cd5bfbc 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 39 68 6.2E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M634_20475 d5e351807ab5c514f66f49c25916dab6 313 SUPERFAMILY SSF103481 217 294 4.32E-11 T 12-10-2018 M634_20475 d5e351807ab5c514f66f49c25916dab6 313 Pfam PF00892 EamA-like transporter family 156 294 2.6E-12 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M634_20475 d5e351807ab5c514f66f49c25916dab6 313 Pfam PF00892 EamA-like transporter family 8 141 3.7E-8 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M634_20475 d5e351807ab5c514f66f49c25916dab6 313 SUPERFAMILY SSF103481 44 144 4.97E-9 T 12-10-2018 M634_02060 8650ea6d552d8f9a1810aed5f98c4194 427 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 313 324 - T 12-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 M634_02060 8650ea6d552d8f9a1810aed5f98c4194 427 Pfam PF01029 NusB family 1 123 2.1E-24 T 12-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 M634_02060 8650ea6d552d8f9a1810aed5f98c4194 427 SUPERFAMILY SSF53335 139 424 1.67E-78 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_02060 8650ea6d552d8f9a1810aed5f98c4194 427 Gene3D G3DSA:1.10.940.10 1 142 9.1E-45 T 12-10-2018 IPR035926 NusB-like superfamily M634_02060 8650ea6d552d8f9a1810aed5f98c4194 427 Gene3D G3DSA:3.40.50.150 228 425 8.8E-71 T 12-10-2018 M634_02060 8650ea6d552d8f9a1810aed5f98c4194 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 219 233 2.3E-30 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase M634_02060 8650ea6d552d8f9a1810aed5f98c4194 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 248 258 2.3E-30 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase M634_02060 8650ea6d552d8f9a1810aed5f98c4194 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 407 424 2.3E-30 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase M634_02060 8650ea6d552d8f9a1810aed5f98c4194 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 314 326 2.3E-30 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase M634_02060 8650ea6d552d8f9a1810aed5f98c4194 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 364 380 2.3E-30 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase M634_02060 8650ea6d552d8f9a1810aed5f98c4194 427 Gene3D G3DSA:3.30.70.1170 170 227 6.3E-27 T 12-10-2018 M634_02060 8650ea6d552d8f9a1810aed5f98c4194 427 Pfam PF01189 16S rRNA methyltransferase RsmB/F 238 422 5.4E-69 T 12-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 M634_02060 8650ea6d552d8f9a1810aed5f98c4194 427 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 4 424 3.5E-153 T 12-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 M634_02060 8650ea6d552d8f9a1810aed5f98c4194 427 SUPERFAMILY SSF48013 1 146 1.96E-36 T 12-10-2018 IPR035926 NusB-like superfamily M634_02060 8650ea6d552d8f9a1810aed5f98c4194 427 Gene3D G3DSA:1.10.287.730 143 169 5.5E-14 T 12-10-2018 M634_11740 3d5279ffb707892ed96189ac29890441 192 SMART SM00347 58 158 1.8E-19 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M634_11740 3d5279ffb707892ed96189ac29890441 192 Pfam PF01047 MarR family 65 123 1.3E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M634_11740 3d5279ffb707892ed96189ac29890441 192 Gene3D G3DSA:1.10.10.10 22 177 7.4E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_11740 3d5279ffb707892ed96189ac29890441 192 SUPERFAMILY SSF46785 30 174 5.86E-32 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_20945 5ff6d019b1d55bbf504c09505ad0a633 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 377 9.1E-49 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 M634_20945 5ff6d019b1d55bbf504c09505ad0a633 384 Gene3D G3DSA:1.10.540.10 1 119 7.0E-34 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 M634_20945 5ff6d019b1d55bbf504c09505ad0a633 384 PIRSF PIRSF016578 225 378 1.7E-13 T 12-10-2018 M634_20945 5ff6d019b1d55bbf504c09505ad0a633 384 PIRSF PIRSF016578 4 192 3.0E-10 T 12-10-2018 M634_20945 5ff6d019b1d55bbf504c09505ad0a633 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 9.0E-24 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 M634_20945 5ff6d019b1d55bbf504c09505ad0a633 384 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 M634_20945 5ff6d019b1d55bbf504c09505ad0a633 384 SUPERFAMILY SSF56645 1 240 7.98E-78 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 M634_20945 5ff6d019b1d55bbf504c09505ad0a633 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 1.4E-25 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 M634_20945 5ff6d019b1d55bbf504c09505ad0a633 384 SUPERFAMILY SSF47203 225 378 1.77E-58 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 M634_20945 5ff6d019b1d55bbf504c09505ad0a633 384 Gene3D G3DSA:2.40.110.10 120 231 1.2E-41 T 12-10-2018 M634_20945 5ff6d019b1d55bbf504c09505ad0a633 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 M634_20945 5ff6d019b1d55bbf504c09505ad0a633 384 Gene3D G3DSA:1.20.140.10 232 381 3.9E-53 T 12-10-2018 M634_01740 2fc9731eff87f381f96c954cccabbf83 723 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 317 495 3.4E-57 T 12-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 M634_01740 2fc9731eff87f381f96c954cccabbf83 723 Gene3D G3DSA:1.10.1040.50 498 710 4.8E-73 T 12-10-2018 M634_01740 2fc9731eff87f381f96c954cccabbf83 723 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 518 - T 12-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 M634_01740 2fc9731eff87f381f96c954cccabbf83 723 SUPERFAMILY SSF48179 625 715 9.35E-25 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 M634_01740 2fc9731eff87f381f96c954cccabbf83 723 SUPERFAMILY SSF51735 315 496 1.32E-54 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_01740 2fc9731eff87f381f96c954cccabbf83 723 SUPERFAMILY SSF52096 2 304 5.95E-66 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily M634_01740 2fc9731eff87f381f96c954cccabbf83 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 593 3.4E-25 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 M634_01740 2fc9731eff87f381f96c954cccabbf83 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 628 711 3.5E-6 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 M634_01740 2fc9731eff87f381f96c954cccabbf83 723 Gene3D G3DSA:3.40.50.720 315 497 2.3E-64 T 12-10-2018 M634_01740 2fc9731eff87f381f96c954cccabbf83 723 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 209 8.4E-39 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 M634_01740 2fc9731eff87f381f96c954cccabbf83 723 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 715 0.0 T 12-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 M634_01740 2fc9731eff87f381f96c954cccabbf83 723 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 716 52.077 T 12-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 M634_01740 2fc9731eff87f381f96c954cccabbf83 723 Gene3D G3DSA:3.90.226.10 1 312 8.5E-90 T 12-10-2018 M634_01740 2fc9731eff87f381f96c954cccabbf83 723 SUPERFAMILY SSF48179 496 605 4.25E-28 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 M634_10955 c6e0f782fa4b106b9a9eb0fec0a148ed 94 SUPERFAMILY SSF46689 7 92 1.97E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_10955 c6e0f782fa4b106b9a9eb0fec0a148ed 94 Pfam PF01527 Transposase 10 73 8.6E-10 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 M634_02880 c6e0f782fa4b106b9a9eb0fec0a148ed 94 SUPERFAMILY SSF46689 7 92 1.97E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_02880 c6e0f782fa4b106b9a9eb0fec0a148ed 94 Pfam PF01527 Transposase 10 73 8.6E-10 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 M634_08685 c6e0f782fa4b106b9a9eb0fec0a148ed 94 SUPERFAMILY SSF46689 7 92 1.97E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_08685 c6e0f782fa4b106b9a9eb0fec0a148ed 94 Pfam PF01527 Transposase 10 73 8.6E-10 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 M634_08725 c6e0f782fa4b106b9a9eb0fec0a148ed 94 SUPERFAMILY SSF46689 7 92 1.97E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_08725 c6e0f782fa4b106b9a9eb0fec0a148ed 94 Pfam PF01527 Transposase 10 73 8.6E-10 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 M634_10665 c6e0f782fa4b106b9a9eb0fec0a148ed 94 SUPERFAMILY SSF46689 7 92 1.97E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_10665 c6e0f782fa4b106b9a9eb0fec0a148ed 94 Pfam PF01527 Transposase 10 73 8.6E-10 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 M634_10720 c6e0f782fa4b106b9a9eb0fec0a148ed 94 SUPERFAMILY SSF46689 7 92 1.97E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_10720 c6e0f782fa4b106b9a9eb0fec0a148ed 94 Pfam PF01527 Transposase 10 73 8.6E-10 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 M634_07180 6fc263ac790aec8ddef5c3411524c2a6 1489 Gene3D G3DSA:1.20.1060.30 670 781 9.3E-135 T 12-10-2018 M634_07180 6fc263ac790aec8ddef5c3411524c2a6 1489 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 3 1474 10.918 T 12-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 M634_07180 6fc263ac790aec8ddef5c3411524c2a6 1489 Gene3D G3DSA:1.20.58.850 623 833 9.3E-135 T 12-10-2018 M634_07180 6fc263ac790aec8ddef5c3411524c2a6 1489 Gene3D G3DSA:3.40.1140.10 1385 1471 2.2E-38 T 12-10-2018 M634_07180 6fc263ac790aec8ddef5c3411524c2a6 1489 PIRSF PIRSF005246 3 1489 0.0 T 12-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 M634_07180 6fc263ac790aec8ddef5c3411524c2a6 1489 Pfam PF04310 MukB N-terminal 4 229 8.3E-122 T 12-10-2018 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 M634_07180 6fc263ac790aec8ddef5c3411524c2a6 1489 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1339 1427 1.2E-14 T 12-10-2018 M634_07180 6fc263ac790aec8ddef5c3411524c2a6 1489 SUPERFAMILY SSF52540 28 226 1.0E-22 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_07180 6fc263ac790aec8ddef5c3411524c2a6 1489 Pfam PF16330 MukB hinge domain 649 813 3.2E-73 T 12-10-2018 IPR032520 MukB, hinge domain M634_07180 6fc263ac790aec8ddef5c3411524c2a6 1489 Gene3D G3DSA:3.40.1140.10 3 229 2.7E-98 T 12-10-2018 M634_07180 6fc263ac790aec8ddef5c3411524c2a6 1489 Gene3D G3DSA:1.20.58.850 585 855 9.3E-135 T 12-10-2018 M634_12345 ce423144d286918801206531909589aa 556 SUPERFAMILY SSF50249 347 438 6.34E-21 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_12345 ce423144d286918801206531909589aa 556 Gene3D G3DSA:2.40.50.140 187 268 4.0E-28 T 12-10-2018 M634_12345 ce423144d286918801206531909589aa 556 SUPERFAMILY SSF50249 189 277 4.18E-27 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_12345 ce423144d286918801206531909589aa 556 SMART SM00316 190 260 6.0E-28 T 12-10-2018 IPR022967 RNA-binding domain, S1 M634_12345 ce423144d286918801206531909589aa 556 SMART SM00316 275 347 1.8E-27 T 12-10-2018 IPR022967 RNA-binding domain, S1 M634_12345 ce423144d286918801206531909589aa 556 SMART SM00316 103 171 1.2E-7 T 12-10-2018 IPR022967 RNA-binding domain, S1 M634_12345 ce423144d286918801206531909589aa 556 SMART SM00316 362 434 1.9E-21 T 12-10-2018 IPR022967 RNA-binding domain, S1 M634_12345 ce423144d286918801206531909589aa 556 SMART SM00316 449 520 1.5E-19 T 12-10-2018 IPR022967 RNA-binding domain, S1 M634_12345 ce423144d286918801206531909589aa 556 SMART SM00316 19 87 0.0012 T 12-10-2018 IPR022967 RNA-binding domain, S1 M634_12345 ce423144d286918801206531909589aa 556 SUPERFAMILY SSF50249 255 360 2.29E-28 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_12345 ce423144d286918801206531909589aa 556 Gene3D G3DSA:2.40.50.140 269 357 1.5E-31 T 12-10-2018 M634_12345 ce423144d286918801206531909589aa 556 Gene3D G3DSA:2.40.50.140 358 443 1.9E-23 T 12-10-2018 M634_12345 ce423144d286918801206531909589aa 556 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 8.3E-231 T 12-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 M634_12345 ce423144d286918801206531909589aa 556 Gene3D G3DSA:2.40.50.140 6 98 1.0E-16 T 12-10-2018 M634_12345 ce423144d286918801206531909589aa 556 SUPERFAMILY SSF50249 88 174 2.61E-13 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_12345 ce423144d286918801206531909589aa 556 SUPERFAMILY SSF50249 4 112 1.89E-17 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_12345 ce423144d286918801206531909589aa 556 PRINTS PR00681 Ribosomal protein S1 signature 155 175 3.4E-97 T 12-10-2018 M634_12345 ce423144d286918801206531909589aa 556 PRINTS PR00681 Ribosomal protein S1 signature 108 124 3.4E-97 T 12-10-2018 M634_12345 ce423144d286918801206531909589aa 556 PRINTS PR00681 Ribosomal protein S1 signature 21 39 3.4E-97 T 12-10-2018 M634_12345 ce423144d286918801206531909589aa 556 PRINTS PR00681 Ribosomal protein S1 signature 126 143 3.4E-97 T 12-10-2018 M634_12345 ce423144d286918801206531909589aa 556 PRINTS PR00681 Ribosomal protein S1 signature 330 348 3.4E-97 T 12-10-2018 M634_12345 ce423144d286918801206531909589aa 556 PRINTS PR00681 Ribosomal protein S1 signature 212 233 3.4E-97 T 12-10-2018 M634_12345 ce423144d286918801206531909589aa 556 PRINTS PR00681 Ribosomal protein S1 signature 290 309 3.4E-97 T 12-10-2018 M634_12345 ce423144d286918801206531909589aa 556 PRINTS PR00681 Ribosomal protein S1 signature 39 53 3.4E-97 T 12-10-2018 M634_12345 ce423144d286918801206531909589aa 556 PRINTS PR00681 Ribosomal protein S1 signature 84 103 3.4E-97 T 12-10-2018 M634_12345 ce423144d286918801206531909589aa 556 Pfam PF00575 S1 RNA binding domain 275 347 2.6E-21 T 12-10-2018 IPR003029 S1 domain GO:0003676 M634_12345 ce423144d286918801206531909589aa 556 Pfam PF00575 S1 RNA binding domain 362 434 1.1E-20 T 12-10-2018 IPR003029 S1 domain GO:0003676 M634_12345 ce423144d286918801206531909589aa 556 Pfam PF00575 S1 RNA binding domain 18 86 1.5E-6 T 12-10-2018 IPR003029 S1 domain GO:0003676 M634_12345 ce423144d286918801206531909589aa 556 Pfam PF00575 S1 RNA binding domain 449 520 8.9E-15 T 12-10-2018 IPR003029 S1 domain GO:0003676 M634_12345 ce423144d286918801206531909589aa 556 Pfam PF00575 S1 RNA binding domain 189 260 1.7E-21 T 12-10-2018 IPR003029 S1 domain GO:0003676 M634_12345 ce423144d286918801206531909589aa 556 Pfam PF00575 S1 RNA binding domain 103 171 5.9E-8 T 12-10-2018 IPR003029 S1 domain GO:0003676 M634_12345 ce423144d286918801206531909589aa 556 SUPERFAMILY SSF50249 429 540 2.61E-23 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_12345 ce423144d286918801206531909589aa 556 PIRSF PIRSF002111 1 534 5.2E-218 T 12-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 M634_12345 ce423144d286918801206531909589aa 556 Gene3D G3DSA:2.40.50.140 99 178 1.5E-5 T 12-10-2018 M634_12345 ce423144d286918801206531909589aa 556 Gene3D G3DSA:2.40.50.140 444 528 3.1E-19 T 12-10-2018 M634_05460 ff6e5320d22faf3471baf10126237175 315 Gene3D G3DSA:3.40.50.2300 163 279 3.1E-64 T 12-10-2018 M634_05460 ff6e5320d22faf3471baf10126237175 315 Gene3D G3DSA:1.10.260.40 2 60 1.7E-21 T 12-10-2018 M634_05460 ff6e5320d22faf3471baf10126237175 315 Gene3D G3DSA:3.40.50.2300 68 303 3.1E-64 T 12-10-2018 M634_05460 ff6e5320d22faf3471baf10126237175 315 SUPERFAMILY SSF47413 3 60 1.13E-16 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M634_05460 ff6e5320d22faf3471baf10126237175 315 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 1.3E-19 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M634_05460 ff6e5320d22faf3471baf10126237175 315 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 310 1.5E-138 T 12-10-2018 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 M634_05460 ff6e5320d22faf3471baf10126237175 315 SMART SM00354 4 74 2.1E-32 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M634_05460 ff6e5320d22faf3471baf10126237175 315 SUPERFAMILY SSF53822 63 305 6.09E-60 T 12-10-2018 IPR028082 Periplasmic binding protein-like I M634_05460 ff6e5320d22faf3471baf10126237175 315 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 12-10-2018 M634_05460 ff6e5320d22faf3471baf10126237175 315 Pfam PF13377 Periplasmic binding protein-like domain 168 312 1.8E-16 T 12-10-2018 M634_01820 398cd26a122831a76bc212e7f5bfd8fe 359 ProSitePatterns PS00617 RecF protein signature 1. 118 138 - T 12-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 M634_01820 398cd26a122831a76bc212e7f5bfd8fe 359 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 359 98.487 T 12-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 M634_01820 398cd26a122831a76bc212e7f5bfd8fe 359 SUPERFAMILY SSF52540 1 344 1.39E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_01820 398cd26a122831a76bc212e7f5bfd8fe 359 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 354 1.4E-37 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal M634_01820 398cd26a122831a76bc212e7f5bfd8fe 359 Gene3D G3DSA:1.20.1050.90 121 298 1.9E-82 T 12-10-2018 M634_01820 398cd26a122831a76bc212e7f5bfd8fe 359 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 356 2.3E-120 T 12-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 M634_01820 398cd26a122831a76bc212e7f5bfd8fe 359 Gene3D G3DSA:3.40.50.300 8 332 1.9E-82 T 12-10-2018 M634_01820 398cd26a122831a76bc212e7f5bfd8fe 359 ProSitePatterns PS00618 RecF protein signature 2. 299 317 - T 12-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 M634_04525 38efcf6c4bbcb7fcc33efd381b0b53f4 98 SMART SM00418 15 93 5.2E-28 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M634_04525 38efcf6c4bbcb7fcc33efd381b0b53f4 98 Pfam PF01022 Bacterial regulatory protein, arsR family 23 67 3.3E-16 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M634_04525 38efcf6c4bbcb7fcc33efd381b0b53f4 98 SUPERFAMILY SSF46785 9 96 2.92E-25 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_04525 38efcf6c4bbcb7fcc33efd381b0b53f4 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 47 7.7E-14 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M634_04525 38efcf6c4bbcb7fcc33efd381b0b53f4 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 7.7E-14 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M634_04525 38efcf6c4bbcb7fcc33efd381b0b53f4 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 7.7E-14 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M634_04525 38efcf6c4bbcb7fcc33efd381b0b53f4 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 7.7E-14 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M634_04525 38efcf6c4bbcb7fcc33efd381b0b53f4 98 Gene3D G3DSA:1.10.10.10 1 98 1.2E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_03775 4f76daacb533439db1b80e2f1901d211 230 Gene3D G3DSA:3.40.50.2300 1 121 2.3E-37 T 12-10-2018 M634_03775 4f76daacb533439db1b80e2f1901d211 230 SMART SM00862 149 224 8.5E-25 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_03775 4f76daacb533439db1b80e2f1901d211 230 Gene3D G3DSA:1.10.10.10 127 230 9.1E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_03775 4f76daacb533439db1b80e2f1901d211 230 SUPERFAMILY SSF52172 2 117 8.11E-38 T 12-10-2018 IPR011006 CheY-like superfamily M634_03775 4f76daacb533439db1b80e2f1901d211 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 224 8.8E-26 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_03775 4f76daacb533439db1b80e2f1901d211 230 Pfam PF00072 Response regulator receiver domain 3 113 2.3E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_03775 4f76daacb533439db1b80e2f1901d211 230 SMART SM00448 1 112 3.4E-40 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_03775 4f76daacb533439db1b80e2f1901d211 230 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 224 1.5E-99 T 12-10-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 M634_03775 4f76daacb533439db1b80e2f1901d211 230 SUPERFAMILY SSF46894 127 225 3.97E-29 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M634_07290 260d4a5cc907dea8faa94ce1aa2b9790 450 Pfam PF07676 WD40-like Beta Propeller Repeat 222 248 2.9E-8 T 12-10-2018 IPR011659 WD40-like Beta Propeller M634_07290 260d4a5cc907dea8faa94ce1aa2b9790 450 Pfam PF07676 WD40-like Beta Propeller Repeat 300 336 4.1E-14 T 12-10-2018 IPR011659 WD40-like Beta Propeller M634_07290 260d4a5cc907dea8faa94ce1aa2b9790 450 Pfam PF07676 WD40-like Beta Propeller Repeat 257 291 1.2E-6 T 12-10-2018 IPR011659 WD40-like Beta Propeller M634_07290 260d4a5cc907dea8faa94ce1aa2b9790 450 Pfam PF04052 TolB amino-terminal domain 24 126 9.4E-36 T 12-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 M634_07290 260d4a5cc907dea8faa94ce1aa2b9790 450 Gene3D G3DSA:2.120.10.30 185 450 2.2E-96 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like M634_07290 260d4a5cc907dea8faa94ce1aa2b9790 450 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 5 446 52.583 T 12-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 M634_07290 260d4a5cc907dea8faa94ce1aa2b9790 450 Gene3D G3DSA:3.40.50.10070 23 184 2.6E-49 T 12-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 M634_07290 260d4a5cc907dea8faa94ce1aa2b9790 450 SUPERFAMILY SSF52964 29 181 9.42E-42 T 12-10-2018 M634_07290 260d4a5cc907dea8faa94ce1aa2b9790 450 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 17 447 1.9E-168 T 12-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 M634_07290 260d4a5cc907dea8faa94ce1aa2b9790 450 SUPERFAMILY SSF69304 176 448 1.44E-57 T 12-10-2018 M634_20510 2c4d2eeb503bf1d92d3e853422fee8f5 300 Pfam PF02355 Protein export membrane protein 101 284 4.6E-53 T 12-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial M634_20510 2c4d2eeb503bf1d92d3e853422fee8f5 300 PRINTS PR01755 Bacterial translocase SecF protein signature 145 159 4.4E-24 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial M634_20510 2c4d2eeb503bf1d92d3e853422fee8f5 300 PRINTS PR01755 Bacterial translocase SecF protein signature 225 240 4.4E-24 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial M634_20510 2c4d2eeb503bf1d92d3e853422fee8f5 300 PRINTS PR01755 Bacterial translocase SecF protein signature 193 211 4.4E-24 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial M634_20510 2c4d2eeb503bf1d92d3e853422fee8f5 300 PRINTS PR01755 Bacterial translocase SecF protein signature 34 49 4.4E-24 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial M634_20510 2c4d2eeb503bf1d92d3e853422fee8f5 300 Gene3D G3DSA:1.20.1640.10 95 290 2.0E-8 T 12-10-2018 M634_20510 2c4d2eeb503bf1d92d3e853422fee8f5 300 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 7 287 21.384 T 12-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 M634_20510 2c4d2eeb503bf1d92d3e853422fee8f5 300 SUPERFAMILY SSF82866 85 283 1.57E-34 T 12-10-2018 M634_20510 2c4d2eeb503bf1d92d3e853422fee8f5 300 Pfam PF07549 SecD/SecF GG Motif 29 55 3.6E-9 T 12-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site M634_20510 2c4d2eeb503bf1d92d3e853422fee8f5 300 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 35 276 2.8E-63 T 12-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 M634_20510 2c4d2eeb503bf1d92d3e853422fee8f5 300 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 107 274 1.4E-45 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial M634_18945 9c69dd32353cab669c88d2074700624f 640 TIGRFAM TIGR01273 speA: arginine decarboxylase 12 638 4.4E-267 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 M634_18945 9c69dd32353cab669c88d2074700624f 640 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 340 359 2.2E-12 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 M634_18945 9c69dd32353cab669c88d2074700624f 640 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 549 562 2.2E-12 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 M634_18945 9c69dd32353cab669c88d2074700624f 640 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 246 259 2.2E-12 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 M634_18945 9c69dd32353cab669c88d2074700624f 640 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 102 120 2.2E-12 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 M634_18945 9c69dd32353cab669c88d2074700624f 640 SUPERFAMILY SSF51419 70 352 3.93E-64 T 12-10-2018 IPR029066 PLP-binding barrel M634_18945 9c69dd32353cab669c88d2074700624f 640 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 83 350 2.3E-49 T 12-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 M634_18945 9c69dd32353cab669c88d2074700624f 640 PIRSF PIRSF001336 2 640 7.0E-251 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 M634_18945 9c69dd32353cab669c88d2074700624f 640 Gene3D G3DSA:2.40.37.10 18 575 4.2E-235 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 M634_18945 9c69dd32353cab669c88d2074700624f 640 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 7 639 42.353 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 M634_18945 9c69dd32353cab669c88d2074700624f 640 Gene3D G3DSA:3.20.20.10 71 355 4.2E-235 T 12-10-2018 IPR029066 PLP-binding barrel M634_18945 9c69dd32353cab669c88d2074700624f 640 PRINTS PR01180 Arginine decarboxylase signature 94 108 2.4E-63 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 M634_18945 9c69dd32353cab669c88d2074700624f 640 PRINTS PR01180 Arginine decarboxylase signature 153 168 2.4E-63 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 M634_18945 9c69dd32353cab669c88d2074700624f 640 PRINTS PR01180 Arginine decarboxylase signature 203 225 2.4E-63 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 M634_18945 9c69dd32353cab669c88d2074700624f 640 PRINTS PR01180 Arginine decarboxylase signature 549 570 2.4E-63 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 M634_18945 9c69dd32353cab669c88d2074700624f 640 PRINTS PR01180 Arginine decarboxylase signature 179 200 2.4E-63 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 M634_18945 9c69dd32353cab669c88d2074700624f 640 PRINTS PR01180 Arginine decarboxylase signature 330 347 2.4E-63 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 M634_18945 9c69dd32353cab669c88d2074700624f 640 PRINTS PR01180 Arginine decarboxylase signature 471 492 2.4E-63 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 M634_18945 9c69dd32353cab669c88d2074700624f 640 PRINTS PR01180 Arginine decarboxylase signature 70 85 2.4E-63 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 M634_18945 9c69dd32353cab669c88d2074700624f 640 PRINTS PR01180 Arginine decarboxylase signature 496 521 2.4E-63 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 M634_18945 9c69dd32353cab669c88d2074700624f 640 Gene3D G3DSA:1.20.58.930 372 467 4.2E-235 T 12-10-2018 M634_01305 f334fd4970b997d1ddc56f96e596534e 409 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 133 406 65.141 T 12-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 M634_01305 f334fd4970b997d1ddc56f96e596534e 409 SMART SM00382 204 396 7.9E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_01305 f334fd4970b997d1ddc56f96e596534e 409 SMART SM00963 110 190 2.7E-27 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 M634_01305 f334fd4970b997d1ddc56f96e596534e 409 Pfam PF00448 SRP54-type protein, GTPase domain 206 405 3.0E-77 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 M634_01305 f334fd4970b997d1ddc56f96e596534e 409 SMART SM00962 205 406 2.9E-123 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 M634_01305 f334fd4970b997d1ddc56f96e596534e 409 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 379 392 - T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 M634_01305 f334fd4970b997d1ddc56f96e596534e 409 Pfam PF02881 SRP54-type protein, helical bundle domain 125 186 1.7E-13 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 M634_01305 f334fd4970b997d1ddc56f96e596534e 409 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 133 405 4.1E-115 T 12-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 M634_01305 f334fd4970b997d1ddc56f96e596534e 409 SUPERFAMILY SSF47364 105 184 1.57E-22 T 12-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 M634_01305 f334fd4970b997d1ddc56f96e596534e 409 SUPERFAMILY SSF52540 203 406 8.84E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_01305 f334fd4970b997d1ddc56f96e596534e 409 Gene3D G3DSA:1.20.120.140 107 404 1.5E-117 T 12-10-2018 M634_01305 f334fd4970b997d1ddc56f96e596534e 409 Gene3D G3DSA:3.40.50.300 202 394 1.5E-117 T 12-10-2018 M634_05365 4135665ad58361fc45e960483aa499ad 253 Pfam PF01618 MotA/TolQ/ExbB proton channel family 99 213 6.0E-22 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel M634_05365 4135665ad58361fc45e960483aa499ad 253 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 182 199 - T 12-10-2018 IPR000540 Flagellar motor protein MotA, conserved site M634_04030 b08dcd738c29d4731593730fe11824f2 947 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 556 807 3.3E-98 T 12-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 M634_04030 b08dcd738c29d4731593730fe11824f2 947 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 33 279 2.0E-94 T 12-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 M634_04030 b08dcd738c29d4731593730fe11824f2 947 Gene3D G3DSA:1.20.120.1510 451 564 8.7E-32 T 12-10-2018 M634_04030 b08dcd738c29d4731593730fe11824f2 947 SUPERFAMILY SSF81593 290 439 3.69E-42 T 12-10-2018 M634_04030 b08dcd738c29d4731593730fe11824f2 947 Gene3D G3DSA:1.20.120.330 288 443 1.8E-53 T 12-10-2018 M634_04030 b08dcd738c29d4731593730fe11824f2 947 Gene3D G3DSA:1.20.120.330 815 947 3.2E-43 T 12-10-2018 M634_04030 b08dcd738c29d4731593730fe11824f2 947 SUPERFAMILY SSF81301 528 818 6.54E-89 T 12-10-2018 M634_04030 b08dcd738c29d4731593730fe11824f2 947 Gene3D G3DSA:3.30.460.10 114 287 1.8E-65 T 12-10-2018 M634_04030 b08dcd738c29d4731593730fe11824f2 947 Pfam PF08335 GlnD PII-uridylyltransferase 300 439 2.5E-44 T 12-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 M634_04030 b08dcd738c29d4731593730fe11824f2 947 Pfam PF08335 GlnD PII-uridylyltransferase 830 912 2.5E-7 T 12-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 M634_04030 b08dcd738c29d4731593730fe11824f2 947 Gene3D G3DSA:3.30.460.100 565 814 2.1E-92 T 12-10-2018 M634_04030 b08dcd738c29d4731593730fe11824f2 947 SUPERFAMILY SSF81301 23 289 3.63E-88 T 12-10-2018 M634_04030 b08dcd738c29d4731593730fe11824f2 947 SUPERFAMILY SSF81593 818 946 2.28E-32 T 12-10-2018 M634_04030 b08dcd738c29d4731593730fe11824f2 947 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 30 944 19.179 T 12-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 M634_04030 b08dcd738c29d4731593730fe11824f2 947 Gene3D G3DSA:1.10.4050.10 2 112 4.8E-12 T 12-10-2018 M634_24235 f33d4253d5dcbc6d6006be0c35b17577 816 Pfam PF08453 Peptidase family M9 N-terminal 31 212 9.9E-54 T 12-10-2018 IPR013661 Peptidase M9, collagenase, N-terminal domain M634_24235 f33d4253d5dcbc6d6006be0c35b17577 816 Gene3D G3DSA:1.10.1740.190 303 450 2.5E-33 T 12-10-2018 M634_24235 f33d4253d5dcbc6d6006be0c35b17577 816 Pfam PF01752 Collagenase 274 558 1.6E-112 T 12-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 M634_24235 f33d4253d5dcbc6d6006be0c35b17577 816 Gene3D G3DSA:2.60.120.380 591 692 1.5E-12 T 12-10-2018 M634_24235 f33d4253d5dcbc6d6006be0c35b17577 816 Gene3D G3DSA:2.60.120.380 711 815 1.3E-7 T 12-10-2018 M634_24235 f33d4253d5dcbc6d6006be0c35b17577 816 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 607 678 1.4E-9 T 12-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial M634_24235 f33d4253d5dcbc6d6006be0c35b17577 816 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 374 388 1.1E-31 T 12-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 M634_24235 f33d4253d5dcbc6d6006be0c35b17577 816 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 97 115 1.1E-31 T 12-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 M634_24235 f33d4253d5dcbc6d6006be0c35b17577 816 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 434 452 1.1E-31 T 12-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 M634_24235 f33d4253d5dcbc6d6006be0c35b17577 816 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 458 473 1.1E-31 T 12-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 M634_24235 f33d4253d5dcbc6d6006be0c35b17577 816 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 392 408 1.1E-31 T 12-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 M634_04025 a932a18efc9b90bbbc740449e78c5265 418 SMART SM00283 156 417 2.1E-69 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_04025 a932a18efc9b90bbbc740449e78c5265 418 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 202 384 1.6E-42 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_04025 a932a18efc9b90bbbc740449e78c5265 418 Gene3D G3DSA:1.10.287.950 90 418 2.5E-68 T 12-10-2018 M634_04025 a932a18efc9b90bbbc740449e78c5265 418 SUPERFAMILY SSF58104 109 418 1.83E-75 T 12-10-2018 M634_04025 a932a18efc9b90bbbc740449e78c5265 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 254 281 3.2E-23 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M634_04025 a932a18efc9b90bbbc740449e78c5265 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 283 312 3.2E-23 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M634_04025 a932a18efc9b90bbbc740449e78c5265 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 68 88 3.2E-23 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M634_20450 686cb80d3f6aa172538fcf7203db955f 858 SMART SM00388 481 546 2.1E-21 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_20450 686cb80d3f6aa172538fcf7203db955f 858 Pfam PF09308 LuxQ, periplasmic 40 277 2.1E-101 T 12-10-2018 IPR015387 LuxQ, periplasmic GO:0004673|GO:0016791 M634_20450 686cb80d3f6aa172538fcf7203db955f 858 SUPERFAMILY SSF103190 51 269 5.65E-71 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily M634_20450 686cb80d3f6aa172538fcf7203db955f 858 Gene3D G3DSA:3.30.450.220 50 206 1.6E-64 T 12-10-2018 M634_20450 686cb80d3f6aa172538fcf7203db955f 858 SUPERFAMILY SSF47384 469 547 3.53E-19 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M634_20450 686cb80d3f6aa172538fcf7203db955f 858 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 593 708 2.0E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_20450 686cb80d3f6aa172538fcf7203db955f 858 Gene3D G3DSA:2.20.20.100 207 270 7.4E-37 T 12-10-2018 M634_20450 686cb80d3f6aa172538fcf7203db955f 858 Gene3D G3DSA:3.40.50.2300 720 854 6.8E-32 T 12-10-2018 M634_20450 686cb80d3f6aa172538fcf7203db955f 858 Gene3D G3DSA:3.30.450.20 343 471 1.6E-10 T 12-10-2018 M634_20450 686cb80d3f6aa172538fcf7203db955f 858 Pfam PF00072 Response regulator receiver domain 736 845 1.4E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_20450 686cb80d3f6aa172538fcf7203db955f 858 SMART SM00387 593 710 6.0E-38 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_20450 686cb80d3f6aa172538fcf7203db955f 858 Pfam PF00512 His Kinase A (phospho-acceptor) domain 482 546 1.5E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_20450 686cb80d3f6aa172538fcf7203db955f 858 Gene3D G3DSA:1.10.287.130 472 546 2.0E-22 T 12-10-2018 M634_20450 686cb80d3f6aa172538fcf7203db955f 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 653 663 2.8E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_20450 686cb80d3f6aa172538fcf7203db955f 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 670 688 2.8E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_20450 686cb80d3f6aa172538fcf7203db955f 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 694 707 2.8E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_20450 686cb80d3f6aa172538fcf7203db955f 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 635 649 2.8E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_20450 686cb80d3f6aa172538fcf7203db955f 858 SUPERFAMILY SSF55874 535 708 3.41E-45 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_20450 686cb80d3f6aa172538fcf7203db955f 858 SMART SM00448 734 846 3.3E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_20450 686cb80d3f6aa172538fcf7203db955f 858 SUPERFAMILY SSF52172 733 853 1.29E-29 T 12-10-2018 IPR011006 CheY-like superfamily M634_20450 686cb80d3f6aa172538fcf7203db955f 858 ProDom PD142495 MEMBRANE SENSOR TRANSFERASE LUXQ 2.7.3.- TRANSMEMBRANE INNER PHOSPHORYLATION SENSORY AUTOINDUCER 8 360 0.0 T 12-10-2018 IPR015387 LuxQ, periplasmic GO:0004673|GO:0016791 M634_20450 686cb80d3f6aa172538fcf7203db955f 858 SUPERFAMILY SSF55785 347 459 5.98E-5 T 12-10-2018 IPR035965 PAS domain superfamily M634_20450 686cb80d3f6aa172538fcf7203db955f 858 Gene3D G3DSA:3.30.565.10 547 714 3.1E-47 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_02680 c4bc8d99aaa3b679036114ba89e51a3f 147 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M634_02680 c4bc8d99aaa3b679036114ba89e51a3f 147 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 31 8.2E-10 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M634_02680 c4bc8d99aaa3b679036114ba89e51a3f 147 Pfam PF08334 Type II secretion system (T2SS), protein G 33 141 1.5E-42 T 12-10-2018 IPR013545 Type II secretion system protein G M634_02680 c4bc8d99aaa3b679036114ba89e51a3f 147 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 9 142 1.7E-57 T 12-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 M634_02680 c4bc8d99aaa3b679036114ba89e51a3f 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 46 64 4.2E-22 T 12-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 M634_02680 c4bc8d99aaa3b679036114ba89e51a3f 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 10 35 4.2E-22 T 12-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 M634_02680 c4bc8d99aaa3b679036114ba89e51a3f 147 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 30 2.7E-10 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M634_02680 c4bc8d99aaa3b679036114ba89e51a3f 147 Gene3D G3DSA:3.30.700.10 33 141 3.8E-44 T 12-10-2018 M634_02680 c4bc8d99aaa3b679036114ba89e51a3f 147 SUPERFAMILY SSF54523 36 142 3.19E-38 T 12-10-2018 M634_19335 d7ca4162def059dad0ad4e4a159177a7 342 SMART SM00354 12 82 9.7E-28 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M634_19335 d7ca4162def059dad0ad4e4a159177a7 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 14 59 5.5E-18 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M634_19335 d7ca4162def059dad0ad4e4a159177a7 342 ProSitePatterns PS00356 LacI-type HTH domain signature. 15 33 - T 12-10-2018 M634_19335 d7ca4162def059dad0ad4e4a159177a7 342 SUPERFAMILY SSF53822 70 333 3.85E-49 T 12-10-2018 IPR028082 Periplasmic binding protein-like I M634_19335 d7ca4162def059dad0ad4e4a159177a7 342 Pfam PF13377 Periplasmic binding protein-like domain 179 339 1.4E-26 T 12-10-2018 M634_19335 d7ca4162def059dad0ad4e4a159177a7 342 Gene3D G3DSA:3.40.50.2300 74 318 2.3E-82 T 12-10-2018 M634_19335 d7ca4162def059dad0ad4e4a159177a7 342 SUPERFAMILY SSF47413 12 70 4.31E-16 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M634_19335 d7ca4162def059dad0ad4e4a159177a7 342 Gene3D G3DSA:1.10.260.40 5 70 6.5E-22 T 12-10-2018 M634_19335 d7ca4162def059dad0ad4e4a159177a7 342 Gene3D G3DSA:3.40.50.2300 168 301 2.3E-82 T 12-10-2018 M634_22025 5c178734b80fddd498f0f924795a2f7b 577 SUPERFAMILY SSF52794 121 222 3.49E-37 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 M634_22025 5c178734b80fddd498f0f924795a2f7b 577 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 123 206 1.5E-36 T 12-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 M634_22025 5c178734b80fddd498f0f924795a2f7b 577 SUPERFAMILY SSF52794 2 101 5.93E-28 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 M634_22025 5c178734b80fddd498f0f924795a2f7b 577 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 124 211 3.5E-17 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 M634_22025 5c178734b80fddd498f0f924795a2f7b 577 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 92 8.9E-14 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 M634_22025 5c178734b80fddd498f0f924795a2f7b 577 Pfam PF02378 Phosphotransferase system, EIIC 247 510 1.3E-16 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 M634_22025 5c178734b80fddd498f0f924795a2f7b 577 Gene3D G3DSA:3.40.50.2300 1 103 5.3E-25 T 12-10-2018 M634_22025 5c178734b80fddd498f0f924795a2f7b 577 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 230 566 1.8E-141 T 12-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 M634_22025 5c178734b80fddd498f0f924795a2f7b 577 Gene3D G3DSA:3.40.50.2300 112 222 4.4E-41 T 12-10-2018 M634_15420 fee8dc05048b902085966dc663b6ed9d 345 Gene3D G3DSA:3.40.50.720 3 332 1.0E-127 T 12-10-2018 M634_15420 fee8dc05048b902085966dc663b6ed9d 345 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 3 332 6.6E-190 T 12-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 M634_15420 fee8dc05048b902085966dc663b6ed9d 345 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 109 1.1E-31 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_15420 fee8dc05048b902085966dc663b6ed9d 345 SUPERFAMILY SSF55347 159 321 6.55E-59 T 12-10-2018 M634_15420 fee8dc05048b902085966dc663b6ed9d 345 PIRSF PIRSF000149 1 342 5.9E-127 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_15420 fee8dc05048b902085966dc663b6ed9d 345 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 1 341 65.903 T 12-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 M634_15420 fee8dc05048b902085966dc663b6ed9d 345 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 164 320 1.2E-55 T 12-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_15420 fee8dc05048b902085966dc663b6ed9d 345 SUPERFAMILY SSF51735 2 183 3.39E-50 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_15420 fee8dc05048b902085966dc663b6ed9d 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 116 129 1.6E-30 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_15420 fee8dc05048b902085966dc663b6ed9d 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 276 291 1.6E-30 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_15420 fee8dc05048b902085966dc663b6ed9d 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 153 171 1.6E-30 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_15420 fee8dc05048b902085966dc663b6ed9d 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 236 253 1.6E-30 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_15420 fee8dc05048b902085966dc663b6ed9d 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 180 196 1.6E-30 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_15420 fee8dc05048b902085966dc663b6ed9d 345 SMART SM00846 2 159 1.9E-73 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_15420 fee8dc05048b902085966dc663b6ed9d 345 Gene3D G3DSA:3.30.360.10 158 322 1.0E-127 T 12-10-2018 M634_13440 3c59fb7317280b84cb0f6ec3439d397f 435 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 16 433 4.3E-125 T 12-10-2018 IPR002155 Thiolase GO:0016747 M634_13440 3c59fb7317280b84cb0f6ec3439d397f 435 ProSitePatterns PS00737 Thiolases signature 2. 381 397 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 M634_13440 3c59fb7317280b84cb0f6ec3439d397f 435 SUPERFAMILY SSF53901 14 293 1.46E-59 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M634_13440 3c59fb7317280b84cb0f6ec3439d397f 435 Gene3D G3DSA:3.40.47.10 4 434 1.7E-109 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M634_13440 3c59fb7317280b84cb0f6ec3439d397f 435 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 6 435 4.0E-267 T 12-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 M634_13440 3c59fb7317280b84cb0f6ec3439d397f 435 PIRSF PIRSF000429 8 435 2.4E-118 T 12-10-2018 IPR002155 Thiolase GO:0016747 M634_13440 3c59fb7317280b84cb0f6ec3439d397f 435 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 1 435 65.118 T 12-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 M634_13440 3c59fb7317280b84cb0f6ec3439d397f 435 SUPERFAMILY SSF53901 296 434 1.18E-30 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M634_13440 3c59fb7317280b84cb0f6ec3439d397f 435 Pfam PF02803 Thiolase, C-terminal domain 295 433 8.1E-36 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 M634_13440 3c59fb7317280b84cb0f6ec3439d397f 435 Pfam PF00108 Thiolase, N-terminal domain 14 286 3.3E-62 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 M634_15925 0c9d0c621a0a75822a28a89fa8a32dfe 320 SUPERFAMILY SSF51735 103 290 2.69E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_15925 0c9d0c621a0a75822a28a89fa8a32dfe 320 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 289 4.5E-55 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 M634_15925 0c9d0c621a0a75822a28a89fa8a32dfe 320 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 225 241 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site M634_15925 0c9d0c621a0a75822a28a89fa8a32dfe 320 SUPERFAMILY SSF52283 4 139 7.18E-33 T 12-10-2018 M634_15925 0c9d0c621a0a75822a28a89fa8a32dfe 320 Gene3D G3DSA:3.40.50.720 27 315 9.8E-110 T 12-10-2018 M634_15925 0c9d0c621a0a75822a28a89fa8a32dfe 320 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 196 218 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site M634_15925 0c9d0c621a0a75822a28a89fa8a32dfe 320 Gene3D G3DSA:3.40.50.720 99 288 9.8E-110 T 12-10-2018 M634_15925 0c9d0c621a0a75822a28a89fa8a32dfe 320 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 37 315 8.6E-23 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 M634_03570 3b32542ef53fa9f2039365b3c65ccd56 528 SUPERFAMILY SSF161098 18 257 1.96E-41 T 12-10-2018 IPR035906 MetI-like superfamily M634_03570 3b32542ef53fa9f2039365b3c65ccd56 528 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 8 518 5.9E-162 T 12-10-2018 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 M634_03570 3b32542ef53fa9f2039365b3c65ccd56 528 Gene3D G3DSA:1.10.3720.10 6 261 1.4E-42 T 12-10-2018 IPR035906 MetI-like superfamily M634_03570 3b32542ef53fa9f2039365b3c65ccd56 528 Gene3D G3DSA:1.10.3720.10 282 527 1.1E-28 T 12-10-2018 IPR035906 MetI-like superfamily M634_03570 3b32542ef53fa9f2039365b3c65ccd56 528 SUPERFAMILY SSF161098 283 521 1.11E-32 T 12-10-2018 IPR035906 MetI-like superfamily M634_03570 3b32542ef53fa9f2039365b3c65ccd56 528 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 356 512 3.8E-7 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_03570 3b32542ef53fa9f2039365b3c65ccd56 528 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 64 256 5.8E-8 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_19885 c9cc290ecab086ee7ff43050e33ee475 219 SUPERFAMILY SSF56784 1 211 2.13E-28 T 12-10-2018 IPR036412 HAD-like superfamily M634_19885 c9cc290ecab086ee7ff43050e33ee475 219 Gene3D G3DSA:3.40.50.1000 6 215 4.4E-55 T 12-10-2018 IPR023214 HAD superfamily M634_19885 c9cc290ecab086ee7ff43050e33ee475 219 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 190 5.8E-22 T 12-10-2018 M634_19885 c9cc290ecab086ee7ff43050e33ee475 219 Pfam PF12710 haloacid dehalogenase-like hydrolase 7 189 3.3E-28 T 12-10-2018 M634_19885 c9cc290ecab086ee7ff43050e33ee475 219 Gene3D G3DSA:1.20.1440.100 17 90 4.4E-55 T 12-10-2018 M634_19885 c9cc290ecab086ee7ff43050e33ee475 219 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 5 204 7.4E-49 T 12-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like M634_08020 799b7dafcffdd45d3fa4d4631eadf438 194 Gene3D G3DSA:1.10.3820.10 7 189 1.1E-34 T 12-10-2018 IPR038266 NapC/NirT cytochrome c superfamily M634_08020 799b7dafcffdd45d3fa4d4631eadf438 194 SUPERFAMILY SSF48695 20 181 6.4E-32 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily M634_08020 799b7dafcffdd45d3fa4d4631eadf438 194 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 8 181 6.3E-57 T 12-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal M634_08020 799b7dafcffdd45d3fa4d4631eadf438 194 PIRSF PIRSF000013 1 194 1.0E-79 T 12-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 M634_20275 da1775af732289fa2c7a91ddfecd0b76 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 383 4.2E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_20275 da1775af732289fa2c7a91ddfecd0b76 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 355 369 4.2E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_20275 da1775af732289fa2c7a91ddfecd0b76 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 408 4.2E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_20275 da1775af732289fa2c7a91ddfecd0b76 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 427 4.2E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_20275 da1775af732289fa2c7a91ddfecd0b76 428 Gene3D G3DSA:3.30.565.10 281 428 7.0E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_20275 da1775af732289fa2c7a91ddfecd0b76 428 SMART SM00387 320 428 5.8E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_20275 da1775af732289fa2c7a91ddfecd0b76 428 Pfam PF00512 His Kinase A (phospho-acceptor) domain 214 275 3.6E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_20275 da1775af732289fa2c7a91ddfecd0b76 428 SUPERFAMILY SSF55874 266 428 2.62E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_20275 da1775af732289fa2c7a91ddfecd0b76 428 SMART SM00388 211 276 9.0E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_20275 da1775af732289fa2c7a91ddfecd0b76 428 Gene3D G3DSA:1.10.287.130 162 277 3.2E-23 T 12-10-2018 M634_20275 da1775af732289fa2c7a91ddfecd0b76 428 SMART SM00304 158 210 1.1E-5 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_20275 da1775af732289fa2c7a91ddfecd0b76 428 SUPERFAMILY SSF47384 194 276 1.28E-15 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M634_20275 da1775af732289fa2c7a91ddfecd0b76 428 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 321 427 7.1E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_05475 a4e52cd1f68ed81d41257f76a29214e1 352 SMART SM00862 31 111 9.4E-4 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_05475 a4e52cd1f68ed81d41257f76a29214e1 352 SUPERFAMILY SSF46894 9 112 2.83E-14 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M634_05475 a4e52cd1f68ed81d41257f76a29214e1 352 Gene3D G3DSA:1.10.10.10 11 119 7.3E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_05475 a4e52cd1f68ed81d41257f76a29214e1 352 Pfam PF00486 Transcriptional regulatory protein, C terminal 36 111 1.4E-10 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_07005 b472f0d6767ef420576463f5db61c528 225 Gene3D G3DSA:1.10.3720.10 1 218 3.3E-49 T 12-10-2018 IPR035906 MetI-like superfamily M634_07005 b472f0d6767ef420576463f5db61c528 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 112 2.3E-22 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 M634_07005 b472f0d6767ef420576463f5db61c528 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 49 217 1.4E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_07005 b472f0d6767ef420576463f5db61c528 225 SUPERFAMILY SSF161098 11 206 1.31E-40 T 12-10-2018 IPR035906 MetI-like superfamily M634_22655 8f7bbc9d7a84fd23ddd7e2bb65f032e0 293 SUPERFAMILY SSF56219 20 292 3.4E-28 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily M634_22655 8f7bbc9d7a84fd23ddd7e2bb65f032e0 293 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 31 283 5.6E-9 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase M634_22655 8f7bbc9d7a84fd23ddd7e2bb65f032e0 293 Gene3D G3DSA:3.60.10.10 20 291 4.5E-29 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily M634_20765 a57b2c7a9d0d3a95ffac61bd83a7c633 513 Gene3D G3DSA:3.40.1190.20 224 508 1.4E-80 T 12-10-2018 IPR029056 Ribokinase-like M634_20765 a57b2c7a9d0d3a95ffac61bd83a7c633 513 PIRSF PIRSF017184 7 512 1.0E-131 T 12-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 M634_20765 a57b2c7a9d0d3a95ffac61bd83a7c633 513 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 235 505 4.8E-62 T 12-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 M634_20765 a57b2c7a9d0d3a95ffac61bd83a7c633 513 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 14 213 1.2E-52 T 12-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 M634_20765 a57b2c7a9d0d3a95ffac61bd83a7c633 513 Gene3D G3DSA:3.40.50.10260 6 218 1.9E-58 T 12-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 M634_20765 a57b2c7a9d0d3a95ffac61bd83a7c633 513 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 446 456 - T 12-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site M634_20765 a57b2c7a9d0d3a95ffac61bd83a7c633 513 SUPERFAMILY SSF64153 8 250 3.27E-64 T 12-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 M634_20765 a57b2c7a9d0d3a95ffac61bd83a7c633 513 Pfam PF01256 Carbohydrate kinase 253 502 2.0E-56 T 12-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 M634_20765 a57b2c7a9d0d3a95ffac61bd83a7c633 513 Pfam PF03853 YjeF-related protein N-terminus 32 193 1.9E-44 T 12-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 M634_20765 a57b2c7a9d0d3a95ffac61bd83a7c633 513 SUPERFAMILY SSF53613 230 505 9.43E-72 T 12-10-2018 IPR029056 Ribokinase-like M634_20765 a57b2c7a9d0d3a95ffac61bd83a7c633 513 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 11 214 23.396 T 12-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 M634_20765 a57b2c7a9d0d3a95ffac61bd83a7c633 513 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 229 511 21.708 T 12-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 M634_08810 ebb12445966cf44bb0431663a4b53727 218 SUPERFAMILY SSF52172 1 173 5.71E-36 T 12-10-2018 IPR011006 CheY-like superfamily M634_08810 ebb12445966cf44bb0431663a4b53727 218 Pfam PF00072 Response regulator receiver domain 4 112 6.1E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_08810 ebb12445966cf44bb0431663a4b53727 218 SMART SM00862 145 216 4.5E-21 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_08810 ebb12445966cf44bb0431663a4b53727 218 Gene3D G3DSA:1.10.10.10 122 218 4.0E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_08810 ebb12445966cf44bb0431663a4b53727 218 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 216 7.1E-19 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_08810 ebb12445966cf44bb0431663a4b53727 218 SMART SM00448 1 112 1.1E-34 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_08810 ebb12445966cf44bb0431663a4b53727 218 Gene3D G3DSA:3.40.50.2300 1 121 8.2E-37 T 12-10-2018 M634_04535 b0c300ef76fdbdaf70eb512676a73c6a 520 Pfam PF03023 MviN-like protein 30 483 2.7E-144 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ M634_04535 b0c300ef76fdbdaf70eb512676a73c6a 520 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 5 511 4.2E-137 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ M634_04535 b0c300ef76fdbdaf70eb512676a73c6a 520 PRINTS PR01806 Virulence factor MviN signature 166 187 1.9E-76 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ M634_04535 b0c300ef76fdbdaf70eb512676a73c6a 520 PRINTS PR01806 Virulence factor MviN signature 54 70 1.9E-76 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ M634_04535 b0c300ef76fdbdaf70eb512676a73c6a 520 PRINTS PR01806 Virulence factor MviN signature 35 54 1.9E-76 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ M634_04535 b0c300ef76fdbdaf70eb512676a73c6a 520 PRINTS PR01806 Virulence factor MviN signature 142 166 1.9E-76 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ M634_04535 b0c300ef76fdbdaf70eb512676a73c6a 520 PRINTS PR01806 Virulence factor MviN signature 268 294 1.9E-76 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ M634_04535 b0c300ef76fdbdaf70eb512676a73c6a 520 PRINTS PR01806 Virulence factor MviN signature 418 435 1.9E-76 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ M634_04535 b0c300ef76fdbdaf70eb512676a73c6a 520 PRINTS PR01806 Virulence factor MviN signature 366 385 1.9E-76 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ M634_04535 b0c300ef76fdbdaf70eb512676a73c6a 520 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 5 476 19.808 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ M634_04535 b0c300ef76fdbdaf70eb512676a73c6a 520 PIRSF PIRSF002869 1 517 6.9E-148 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ M634_08775 49d04504263d1540a3305937454eef10 531 PIRSF PIRSF028991 23 531 3.5E-292 T 12-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted M634_08775 49d04504263d1540a3305937454eef10 531 Pfam PF11230 Protein of unknown function (DUF3029) 39 520 5.5E-230 T 12-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted M634_08775 49d04504263d1540a3305937454eef10 531 TIGRFAM TIGR04040 glycyl_YjjI: glycine radical enzyme, YjjI family 29 520 2.4E-231 T 12-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted M634_08775 49d04504263d1540a3305937454eef10 531 SUPERFAMILY SSF51998 43 486 7.02E-97 T 12-10-2018 M634_03265 70551c6e19a41f1c33295d15ce96bcaf 734 TIGRFAM TIGR00595 priA: primosomal protein N' 222 730 4.0E-192 T 12-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 M634_03265 70551c6e19a41f1c33295d15ce96bcaf 734 SUPERFAMILY SSF52540 462 632 3.16E-29 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_03265 70551c6e19a41f1c33295d15ce96bcaf 734 SMART SM00490 493 590 4.0E-13 T 12-10-2018 IPR001650 Helicase, C-terminal M634_03265 70551c6e19a41f1c33295d15ce96bcaf 734 SUPERFAMILY SSF52540 70 380 3.22E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_03265 70551c6e19a41f1c33295d15ce96bcaf 734 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 733 25.416 T 12-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 M634_03265 70551c6e19a41f1c33295d15ce96bcaf 734 Pfam PF00271 Helicase conserved C-terminal domain 500 589 3.1E-8 T 12-10-2018 IPR001650 Helicase, C-terminal M634_03265 70551c6e19a41f1c33295d15ce96bcaf 734 SMART SM00487 197 396 5.4E-18 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M634_03265 70551c6e19a41f1c33295d15ce96bcaf 734 Gene3D G3DSA:3.40.50.300 186 380 4.1E-77 T 12-10-2018 M634_03265 70551c6e19a41f1c33295d15ce96bcaf 734 Gene3D G3DSA:1.10.8.630 4 113 2.2E-35 T 12-10-2018 M634_03265 70551c6e19a41f1c33295d15ce96bcaf 734 Pfam PF00270 DEAD/DEAH box helicase 220 365 1.2E-14 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 M634_18160 4de591a5ee8fc453d7fa4d123b30184c 484 Gene3D G3DSA:3.30.1360.60 3 79 2.9E-19 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 M634_18160 4de591a5ee8fc453d7fa4d123b30184c 484 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 M634_18160 4de591a5ee8fc453d7fa4d123b30184c 484 SUPERFAMILY SSF55604 8 81 3.53E-18 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 M634_18160 4de591a5ee8fc453d7fa4d123b30184c 484 Pfam PF00367 phosphotransferase system, EIIB 11 43 3.7E-10 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 M634_18160 4de591a5ee8fc453d7fa4d123b30184c 484 Pfam PF02378 Phosphotransferase system, EIIC 130 411 1.9E-31 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 M634_19585 88f9bc5ee51dda7f198d74e497b9f836 532 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 522 1.2E-99 T 12-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 M634_19585 88f9bc5ee51dda7f198d74e497b9f836 532 PRINTS PR00298 60kDa chaperonin signature 27 53 7.7E-71 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 M634_19585 88f9bc5ee51dda7f198d74e497b9f836 532 PRINTS PR00298 60kDa chaperonin signature 83 110 7.7E-71 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 M634_19585 88f9bc5ee51dda7f198d74e497b9f836 532 PRINTS PR00298 60kDa chaperonin signature 350 375 7.7E-71 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 M634_19585 88f9bc5ee51dda7f198d74e497b9f836 532 PRINTS PR00298 60kDa chaperonin signature 398 419 7.7E-71 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 M634_19585 88f9bc5ee51dda7f198d74e497b9f836 532 PRINTS PR00298 60kDa chaperonin signature 268 291 7.7E-71 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 M634_19585 88f9bc5ee51dda7f198d74e497b9f836 532 Gene3D G3DSA:3.50.7.10 192 372 5.7E-237 T 12-10-2018 IPR027409 GroEL-like apical domain superfamily M634_19585 88f9bc5ee51dda7f198d74e497b9f836 532 SUPERFAMILY SSF54849 137 203 1.01E-24 T 12-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily M634_19585 88f9bc5ee51dda7f198d74e497b9f836 532 SUPERFAMILY SSF52029 184 376 3.14E-79 T 12-10-2018 IPR027409 GroEL-like apical domain superfamily M634_19585 88f9bc5ee51dda7f198d74e497b9f836 532 Hamap MF_00600 60 kDa chaperonin [groL]. 2 530 39.838 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 M634_19585 88f9bc5ee51dda7f198d74e497b9f836 532 Gene3D G3DSA:1.10.560.10 8 521 5.7E-237 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily M634_19585 88f9bc5ee51dda7f198d74e497b9f836 532 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 12-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 M634_19585 88f9bc5ee51dda7f198d74e497b9f836 532 Gene3D G3DSA:3.30.260.10 136 410 5.7E-237 T 12-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily M634_19585 88f9bc5ee51dda7f198d74e497b9f836 532 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 3.8E-250 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 M634_19585 88f9bc5ee51dda7f198d74e497b9f836 532 SUPERFAMILY SSF48592 7 521 2.29E-77 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily M634_06810 228d3070ee8b65a3c5f280ffc031b72f 539 SUPERFAMILY SSF51905 101 531 6.16E-37 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_06810 228d3070ee8b65a3c5f280ffc031b72f 539 Gene3D G3DSA:3.30.70.2700 1 81 1.4E-34 T 12-10-2018 M634_06810 228d3070ee8b65a3c5f280ffc031b72f 539 PIRSF PIRSF038984 1 536 1.3E-240 T 12-10-2018 IPR028348 FAD dependent protein M634_06810 228d3070ee8b65a3c5f280ffc031b72f 539 Gene3D G3DSA:3.50.50.60 471 534 5.0E-16 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_06810 228d3070ee8b65a3c5f280ffc031b72f 539 Gene3D G3DSA:3.50.50.60 86 305 1.5E-91 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_17905 d652b6383c50039584b550f4c7ea673c 161 SUPERFAMILY SSF88946 4 87 1.22E-16 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 M634_17905 d652b6383c50039584b550f4c7ea673c 161 Pfam PF08281 Sigma-70, region 4 103 154 1.4E-10 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 M634_17905 d652b6383c50039584b550f4c7ea673c 161 Gene3D G3DSA:1.10.10.10 95 158 5.8E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_17905 d652b6383c50039584b550f4c7ea673c 161 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 32 63 - T 12-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 M634_17905 d652b6383c50039584b550f4c7ea673c 161 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 8 154 1.7E-17 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 M634_17905 d652b6383c50039584b550f4c7ea673c 161 Gene3D G3DSA:1.10.1740.10 1 79 2.6E-15 T 12-10-2018 M634_17905 d652b6383c50039584b550f4c7ea673c 161 Pfam PF04542 Sigma-70 region 2 14 75 6.2E-13 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 M634_17905 d652b6383c50039584b550f4c7ea673c 161 SUPERFAMILY SSF88659 99 156 5.45E-12 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like M634_14900 af0dfb269f161dbd202d68dd408fe628 294 Gene3D G3DSA:3.40.50.620 4 280 3.9E-106 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M634_14900 af0dfb269f161dbd202d68dd408fe628 294 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 124 265 9.2E-17 T 12-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 M634_14900 af0dfb269f161dbd202d68dd408fe628 294 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 7 109 6.9E-27 T 12-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 M634_14900 af0dfb269f161dbd202d68dd408fe628 294 SUPERFAMILY SSF52374 4 280 6.82E-84 T 12-10-2018 M634_14900 af0dfb269f161dbd202d68dd408fe628 294 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 4 286 40.084 T 12-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 M634_14900 af0dfb269f161dbd202d68dd408fe628 294 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 4 267 2.3E-112 T 12-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 M634_14900 af0dfb269f161dbd202d68dd408fe628 294 PRINTS PR00987 Glutamyl-tRNA synthetase signature 7 19 3.9E-13 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 M634_14900 af0dfb269f161dbd202d68dd408fe628 294 PRINTS PR00987 Glutamyl-tRNA synthetase signature 166 176 3.9E-13 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 M634_14900 af0dfb269f161dbd202d68dd408fe628 294 PRINTS PR00987 Glutamyl-tRNA synthetase signature 36 49 3.9E-13 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 M634_14900 af0dfb269f161dbd202d68dd408fe628 294 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 190 3.9E-13 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 M634_14900 af0dfb269f161dbd202d68dd408fe628 294 PRINTS PR00987 Glutamyl-tRNA synthetase signature 21 32 3.9E-13 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 M634_14900 af0dfb269f161dbd202d68dd408fe628 294 Gene3D G3DSA:3.40.50.620 79 214 3.9E-106 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M634_05185 7a8cffd2c9328466202187db658b4df9 637 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 M634_05185 7a8cffd2c9328466202187db658b4df9 637 Gene3D G3DSA:3.30.420.40 5 378 9.0E-166 T 12-10-2018 M634_05185 7a8cffd2c9328466202187db658b4df9 637 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 336 350 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 M634_05185 7a8cffd2c9328466202187db658b4df9 637 Pfam PF00012 Hsp70 protein 4 601 3.0E-262 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M634_05185 7a8cffd2c9328466202187db658b4df9 637 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 4.5E-285 T 12-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 M634_05185 7a8cffd2c9328466202187db658b4df9 637 SUPERFAMILY SSF53067 186 381 1.23E-65 T 12-10-2018 M634_05185 7a8cffd2c9328466202187db658b4df9 637 SUPERFAMILY SSF53067 1 182 1.17E-64 T 12-10-2018 M634_05185 7a8cffd2c9328466202187db658b4df9 637 PRINTS PR00301 70kDa heat shock protein signature 53 61 3.2E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M634_05185 7a8cffd2c9328466202187db658b4df9 637 PRINTS PR00301 70kDa heat shock protein signature 197 207 3.2E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M634_05185 7a8cffd2c9328466202187db658b4df9 637 PRINTS PR00301 70kDa heat shock protein signature 387 406 3.2E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M634_05185 7a8cffd2c9328466202187db658b4df9 637 PRINTS PR00301 70kDa heat shock protein signature 31 43 3.2E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M634_05185 7a8cffd2c9328466202187db658b4df9 637 PRINTS PR00301 70kDa heat shock protein signature 137 157 3.2E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M634_05185 7a8cffd2c9328466202187db658b4df9 637 PRINTS PR00301 70kDa heat shock protein signature 3 16 3.2E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M634_05185 7a8cffd2c9328466202187db658b4df9 637 PRINTS PR00301 70kDa heat shock protein signature 333 349 3.2E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M634_05185 7a8cffd2c9328466202187db658b4df9 637 PRINTS PR00301 70kDa heat shock protein signature 364 384 3.2E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M634_05185 7a8cffd2c9328466202187db658b4df9 637 PRINTS PR00301 70kDa heat shock protein signature 468 484 3.2E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M634_05185 7a8cffd2c9328466202187db658b4df9 637 Gene3D G3DSA:3.30.420.40 179 365 9.0E-166 T 12-10-2018 M634_05185 7a8cffd2c9328466202187db658b4df9 637 Gene3D G3DSA:1.20.1270.10 523 602 2.9E-27 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 M634_05185 7a8cffd2c9328466202187db658b4df9 637 Gene3D G3DSA:2.60.34.10 382 522 6.5E-65 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 M634_05185 7a8cffd2c9328466202187db658b4df9 637 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 M634_05185 7a8cffd2c9328466202187db658b4df9 637 Gene3D G3DSA:3.90.640.10 228 315 9.0E-166 T 12-10-2018 M634_05185 7a8cffd2c9328466202187db658b4df9 637 SUPERFAMILY SSF100920 383 539 3.79E-60 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 M634_05185 7a8cffd2c9328466202187db658b4df9 637 SUPERFAMILY SSF100934 534 607 3.84E-6 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 M634_05185 7a8cffd2c9328466202187db658b4df9 637 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 632 36.238 T 12-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 M634_07300 1e0c8ad61b961230c250f9bb46489fcf 251 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 134 249 3.9E-39 T 12-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal M634_07300 1e0c8ad61b961230c250f9bb46489fcf 251 SMART SM00028 207 240 0.27 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_07300 1e0c8ad61b961230c250f9bb46489fcf 251 SMART SM00028 171 204 28.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_07300 1e0c8ad61b961230c250f9bb46489fcf 251 Gene3D G3DSA:1.20.5.110 40 119 4.6E-21 T 12-10-2018 M634_07300 1e0c8ad61b961230c250f9bb46489fcf 251 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 5 251 17.564 T 12-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 M634_07300 1e0c8ad61b961230c250f9bb46489fcf 251 Pfam PF13174 Tetratricopeptide repeat 208 240 8.9E-8 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_07300 1e0c8ad61b961230c250f9bb46489fcf 251 SUPERFAMILY SSF48452 134 244 1.39E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_07300 1e0c8ad61b961230c250f9bb46489fcf 251 Gene3D G3DSA:1.25.40.10 133 251 1.5E-23 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_07300 1e0c8ad61b961230c250f9bb46489fcf 251 Pfam PF13432 Tetratricopeptide repeat 145 196 6.9E-7 T 12-10-2018 M634_07300 1e0c8ad61b961230c250f9bb46489fcf 251 Pfam PF16331 TolA binding protein trimerisation 42 114 8.4E-24 T 12-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 M634_20755 33e7763c93f3af0fb1bb58a4d8370403 334 SMART SM00448 3 115 5.2E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_20755 33e7763c93f3af0fb1bb58a4d8370403 334 Gene3D G3DSA:3.40.50.2300 3 123 6.2E-28 T 12-10-2018 M634_20755 33e7763c93f3af0fb1bb58a4d8370403 334 Pfam PF00072 Response regulator receiver domain 5 115 5.4E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_20755 33e7763c93f3af0fb1bb58a4d8370403 334 SUPERFAMILY SSF52172 4 120 1.57E-27 T 12-10-2018 IPR011006 CheY-like superfamily M634_20755 33e7763c93f3af0fb1bb58a4d8370403 334 SUPERFAMILY SSF103039 140 329 1.44E-38 T 12-10-2018 IPR028976 CheC-like superfamily M634_20755 33e7763c93f3af0fb1bb58a4d8370403 334 Gene3D G3DSA:3.40.1550.10 139 328 2.4E-31 T 12-10-2018 IPR028976 CheC-like superfamily M634_09690 38be4a27414ce21ffd5c58e17a4aa953 130 SUPERFAMILY SSF46689 9 109 1.42E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_08260 38be4a27414ce21ffd5c58e17a4aa953 130 SUPERFAMILY SSF46689 9 109 1.42E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_22515 38be4a27414ce21ffd5c58e17a4aa953 130 SUPERFAMILY SSF46689 9 109 1.42E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_17670 38be4a27414ce21ffd5c58e17a4aa953 130 SUPERFAMILY SSF46689 9 109 1.42E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_01220 38be4a27414ce21ffd5c58e17a4aa953 130 SUPERFAMILY SSF46689 9 109 1.42E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_22490 38be4a27414ce21ffd5c58e17a4aa953 130 SUPERFAMILY SSF46689 9 109 1.42E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_11720 657a7ca736997beb6c5f0c6010ab48ad 629 Pfam PF00571 CBS domain 156 214 9.4E-7 T 12-10-2018 IPR000644 CBS domain M634_11720 657a7ca736997beb6c5f0c6010ab48ad 629 Pfam PF00571 CBS domain 226 278 3.5E-9 T 12-10-2018 IPR000644 CBS domain M634_11720 657a7ca736997beb6c5f0c6010ab48ad 629 Pfam PF00027 Cyclic nucleotide-binding domain 37 118 6.5E-14 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain M634_11720 657a7ca736997beb6c5f0c6010ab48ad 629 Gene3D G3DSA:3.10.580.10 145 282 6.6E-32 T 12-10-2018 M634_11720 657a7ca736997beb6c5f0c6010ab48ad 629 SUPERFAMILY SSF51206 7 135 1.44E-28 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like M634_11720 657a7ca736997beb6c5f0c6010ab48ad 629 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 479 622 1.9E-47 T 12-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding M634_11720 657a7ca736997beb6c5f0c6010ab48ad 629 SMART SM00116 233 280 5.2E-6 T 12-10-2018 IPR000644 CBS domain M634_11720 657a7ca736997beb6c5f0c6010ab48ad 629 SMART SM00116 159 216 8.4E-5 T 12-10-2018 IPR000644 CBS domain M634_11720 657a7ca736997beb6c5f0c6010ab48ad 629 SMART SM00100 17 134 3.1E-7 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain M634_11720 657a7ca736997beb6c5f0c6010ab48ad 629 SUPERFAMILY SSF54631 151 278 6.05E-27 T 12-10-2018 M634_11720 657a7ca736997beb6c5f0c6010ab48ad 629 Gene3D G3DSA:2.60.120.10 1 144 9.9E-25 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M634_11720 657a7ca736997beb6c5f0c6010ab48ad 629 Pfam PF03445 Putative nucleotidyltransferase DUF294 305 442 8.4E-46 T 12-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 M634_09940 dce67ba365218dc70e9a9fe9a4574e84 203 SUPERFAMILY SSF63380 1 93 2.38E-25 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel M634_09940 dce67ba365218dc70e9a9fe9a4574e84 203 Gene3D G3DSA:2.40.30.20 1 89 1.0E-30 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M634_09940 dce67ba365218dc70e9a9fe9a4574e84 203 Pfam PF00677 Lumazine binding domain 100 184 2.6E-21 T 12-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 M634_09940 dce67ba365218dc70e9a9fe9a4574e84 203 Pfam PF00677 Lumazine binding domain 3 87 1.5E-20 T 12-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 M634_09940 dce67ba365218dc70e9a9fe9a4574e84 203 Gene3D G3DSA:2.40.30.20 94 190 7.7E-29 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M634_09940 dce67ba365218dc70e9a9fe9a4574e84 203 SUPERFAMILY SSF63380 93 198 1.87E-30 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel M634_09940 dce67ba365218dc70e9a9fe9a4574e84 203 PIRSF PIRSF000498 1 203 7.7E-68 T 12-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 M634_09940 dce67ba365218dc70e9a9fe9a4574e84 203 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 202 4.0E-75 T 12-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 M634_18390 663ba9cfb53ee32add0ec721184090fc 160 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 7 156 43.925 T 12-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 M634_18390 663ba9cfb53ee32add0ec721184090fc 160 SUPERFAMILY SSF46767 75 156 3.79E-33 T 12-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 M634_18390 663ba9cfb53ee32add0ec721184090fc 160 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 77 156 3.7E-33 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 M634_18390 663ba9cfb53ee32add0ec721184090fc 160 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 76 155 2.9E-38 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 M634_18390 663ba9cfb53ee32add0ec721184090fc 160 Gene3D G3DSA:3.30.160.70 3 71 1.2E-17 T 12-10-2018 M634_18390 663ba9cfb53ee32add0ec721184090fc 160 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 5 72 4.3E-6 T 12-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 M634_18390 663ba9cfb53ee32add0ec721184090fc 160 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 126 132 - T 12-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 M634_18390 663ba9cfb53ee32add0ec721184090fc 160 SUPERFAMILY SSF53155 4 80 5.89E-19 T 12-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 M634_18390 663ba9cfb53ee32add0ec721184090fc 160 Gene3D G3DSA:1.10.10.10 75 158 1.6E-37 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_07325 2927ac4cb743c6995855fb21d07475fe 388 Gene3D G3DSA:3.30.1490.330 264 345 9.7E-25 T 12-10-2018 M634_07325 2927ac4cb743c6995855fb21d07475fe 388 SUPERFAMILY SSF52440 174 280 2.24E-41 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily M634_07325 2927ac4cb743c6995855fb21d07475fe 388 SUPERFAMILY SSF56059 1 385 2.71E-83 T 12-10-2018 M634_07325 2927ac4cb743c6995855fb21d07475fe 388 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 386 1.2E-156 T 12-10-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain M634_02360 5543240d8aeaa9afcee613b7eb38b41a 1046 Pfam PF13426 PAS domain 507 606 1.0E-9 T 12-10-2018 IPR000014 PAS domain M634_02360 5543240d8aeaa9afcee613b7eb38b41a 1046 Pfam PF00563 EAL domain 799 1033 2.0E-58 T 12-10-2018 IPR001633 EAL domain M634_02360 5543240d8aeaa9afcee613b7eb38b41a 1046 Gene3D G3DSA:3.40.50.2300 84 282 1.4E-9 T 12-10-2018 M634_02360 5543240d8aeaa9afcee613b7eb38b41a 1046 Gene3D G3DSA:3.30.450.20 487 604 1.7E-18 T 12-10-2018 M634_02360 5543240d8aeaa9afcee613b7eb38b41a 1046 SUPERFAMILY SSF55073 623 779 3.37E-40 T 12-10-2018 IPR029787 Nucleotide cyclase M634_02360 5543240d8aeaa9afcee613b7eb38b41a 1046 SUPERFAMILY SSF141868 797 1044 2.35E-71 T 12-10-2018 IPR035919 EAL domain superfamily M634_02360 5543240d8aeaa9afcee613b7eb38b41a 1046 Gene3D G3DSA:3.20.20.450 779 1040 2.0E-76 T 12-10-2018 IPR035919 EAL domain superfamily M634_02360 5543240d8aeaa9afcee613b7eb38b41a 1046 SMART SM00267 607 779 8.0E-43 T 12-10-2018 IPR000160 GGDEF domain M634_02360 5543240d8aeaa9afcee613b7eb38b41a 1046 Pfam PF04392 ABC transporter substrate binding protein 42 282 4.0E-7 T 12-10-2018 IPR007487 ABC transporter, substrate-binding protein M634_02360 5543240d8aeaa9afcee613b7eb38b41a 1046 Pfam PF00990 Diguanylate cyclase, GGDEF domain 618 775 7.4E-35 T 12-10-2018 IPR000160 GGDEF domain M634_02360 5543240d8aeaa9afcee613b7eb38b41a 1046 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 367 491 1.4E-6 T 12-10-2018 IPR000014 PAS domain M634_02360 5543240d8aeaa9afcee613b7eb38b41a 1046 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 493 614 1.4E-15 T 12-10-2018 IPR000014 PAS domain M634_02360 5543240d8aeaa9afcee613b7eb38b41a 1046 SUPERFAMILY SSF55785 359 482 2.44E-7 T 12-10-2018 IPR035965 PAS domain superfamily M634_02360 5543240d8aeaa9afcee613b7eb38b41a 1046 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 614 778 7.8E-33 T 12-10-2018 IPR000160 GGDEF domain M634_02360 5543240d8aeaa9afcee613b7eb38b41a 1046 Gene3D G3DSA:3.30.70.270 608 778 1.6E-45 T 12-10-2018 M634_02360 5543240d8aeaa9afcee613b7eb38b41a 1046 SUPERFAMILY SSF55785 481 604 1.93E-19 T 12-10-2018 IPR035965 PAS domain superfamily M634_02360 5543240d8aeaa9afcee613b7eb38b41a 1046 Gene3D G3DSA:3.40.50.2300 142 263 1.4E-9 T 12-10-2018 M634_02360 5543240d8aeaa9afcee613b7eb38b41a 1046 SMART SM00091 371 438 210.0 T 12-10-2018 IPR000014 PAS domain M634_02360 5543240d8aeaa9afcee613b7eb38b41a 1046 SMART SM00091 496 563 5.5E-4 T 12-10-2018 IPR000014 PAS domain M634_02360 5543240d8aeaa9afcee613b7eb38b41a 1046 SMART SM00086 569 607 0.32 T 12-10-2018 IPR001610 PAC motif M634_02360 5543240d8aeaa9afcee613b7eb38b41a 1046 SMART SM00086 442 484 14.0 T 12-10-2018 IPR001610 PAC motif M634_02360 5543240d8aeaa9afcee613b7eb38b41a 1046 Gene3D G3DSA:3.30.450.20 358 486 5.4E-9 T 12-10-2018 M634_02360 5543240d8aeaa9afcee613b7eb38b41a 1046 SMART SM00052 791 1038 2.1E-60 T 12-10-2018 IPR001633 EAL domain M634_02950 e4bb6030cdb6c1393052a1629f342086 56 Gene3D G3DSA:2.20.28.120 1 56 1.2E-28 T 12-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_02950 e4bb6030cdb6c1393052a1629f342086 56 SUPERFAMILY SSF57829 3 54 7.32E-19 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 M634_02950 e4bb6030cdb6c1393052a1629f342086 56 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 56 1.4E-26 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_02950 e4bb6030cdb6c1393052a1629f342086 56 ProSitePatterns PS00582 Ribosomal protein L33 signature. 22 41 - T 12-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_02950 e4bb6030cdb6c1393052a1629f342086 56 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 6 54 14.671 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_02950 e4bb6030cdb6c1393052a1629f342086 56 Pfam PF00471 Ribosomal protein L33 8 54 1.2E-16 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_09595 40e5ad354f6ce284fb5ebf44947b94bf 324 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 112 321 2.8E-60 T 12-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III M634_09595 40e5ad354f6ce284fb5ebf44947b94bf 324 Gene3D G3DSA:1.20.58.1490 1 94 1.7E-34 T 12-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily M634_09595 40e5ad354f6ce284fb5ebf44947b94bf 324 Gene3D G3DSA:1.10.760.10 209 295 4.7E-74 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_09595 40e5ad354f6ce284fb5ebf44947b94bf 324 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 240 315 1.0E-10 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_09595 40e5ad354f6ce284fb5ebf44947b94bf 324 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 154 227 1.1E-13 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_09595 40e5ad354f6ce284fb5ebf44947b94bf 324 PRINTS PR00605 Class IC cytochrome C signature 293 315 5.1E-6 T 12-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 M634_09595 40e5ad354f6ce284fb5ebf44947b94bf 324 PRINTS PR00605 Class IC cytochrome C signature 164 175 5.1E-6 T 12-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 M634_09595 40e5ad354f6ce284fb5ebf44947b94bf 324 PIRSF PIRSF000006 1 322 9.9E-112 T 12-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III M634_09595 40e5ad354f6ce284fb5ebf44947b94bf 324 Gene3D G3DSA:1.10.760.10 132 318 4.7E-74 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_09595 40e5ad354f6ce284fb5ebf44947b94bf 324 SUPERFAMILY SSF46626 239 320 1.6E-21 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_09595 40e5ad354f6ce284fb5ebf44947b94bf 324 SUPERFAMILY SSF46626 55 238 7.74E-31 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_09595 40e5ad354f6ce284fb5ebf44947b94bf 324 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 37 83 3.3E-23 T 12-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal M634_05290 5e6efa547fc4e8e4043542a0321460eb 415 SUPERFAMILY SSF53474 47 411 2.13E-42 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_05290 5e6efa547fc4e8e4043542a0321460eb 415 Hamap MF_01063 Esterase FrsA [frsA]. 4 415 54.304 T 12-10-2018 IPR010520 UPF0255 family M634_05290 5e6efa547fc4e8e4043542a0321460eb 415 Gene3D G3DSA:3.40.50.1820 18 415 1.2E-110 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_05290 5e6efa547fc4e8e4043542a0321460eb 415 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 5 414 2.8E-235 T 12-10-2018 IPR010520 UPF0255 family M634_00240 12b8e7971c38b347a7fbad58d07049cd 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.3E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_00240 12b8e7971c38b347a7fbad58d07049cd 302 SUPERFAMILY SSF46785 1 111 5.28E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_00240 12b8e7971c38b347a7fbad58d07049cd 302 Gene3D G3DSA:3.40.190.10 164 267 1.5E-65 T 12-10-2018 M634_00240 12b8e7971c38b347a7fbad58d07049cd 302 Gene3D G3DSA:3.40.190.10 91 281 1.5E-65 T 12-10-2018 M634_00240 12b8e7971c38b347a7fbad58d07049cd 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.0E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_00240 12b8e7971c38b347a7fbad58d07049cd 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.0E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_00240 12b8e7971c38b347a7fbad58d07049cd 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.0E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_00240 12b8e7971c38b347a7fbad58d07049cd 302 SUPERFAMILY SSF53850 89 296 2.82E-39 T 12-10-2018 M634_00240 12b8e7971c38b347a7fbad58d07049cd 302 Gene3D G3DSA:1.10.10.10 1 84 2.4E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_00240 12b8e7971c38b347a7fbad58d07049cd 302 Pfam PF03466 LysR substrate binding domain 89 290 2.2E-43 T 12-10-2018 IPR005119 LysR, substrate-binding M634_20040 cc88d3725f0e7be77dc3bb1b250c0fc2 332 Pfam PF12833 Helix-turn-helix domain 251 327 8.8E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_20040 cc88d3725f0e7be77dc3bb1b250c0fc2 332 Gene3D G3DSA:1.10.10.60 222 332 5.6E-23 T 12-10-2018 M634_20040 cc88d3725f0e7be77dc3bb1b250c0fc2 332 SUPERFAMILY SSF46689 280 327 1.79E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_20040 cc88d3725f0e7be77dc3bb1b250c0fc2 332 SMART SM00342 245 327 1.8E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_20040 cc88d3725f0e7be77dc3bb1b250c0fc2 332 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 296 311 1.2E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M634_20040 cc88d3725f0e7be77dc3bb1b250c0fc2 332 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 311 327 1.2E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M634_20040 cc88d3725f0e7be77dc3bb1b250c0fc2 332 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 20 202 1.6E-21 T 12-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal M634_10520 e0f9ac6ea5464507fbbbab052f1028b8 524 Gene3D G3DSA:3.10.20.310 53 139 8.7E-26 T 12-10-2018 M634_10520 e0f9ac6ea5464507fbbbab052f1028b8 524 Gene3D G3DSA:3.10.20.310 140 216 4.3E-14 T 12-10-2018 M634_10520 e0f9ac6ea5464507fbbbab052f1028b8 524 Gene3D G3DSA:2.40.160.50 217 524 6.0E-82 T 12-10-2018 M634_10520 e0f9ac6ea5464507fbbbab052f1028b8 524 Pfam PF01103 Surface antigen 220 524 6.9E-27 T 12-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 M634_00790 9fb7805253f42f75dd18b140cf62180b 320 Gene3D G3DSA:3.40.50.460 143 252 1.2E-116 T 12-10-2018 M634_00790 9fb7805253f42f75dd18b140cf62180b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 9.4E-83 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 M634_00790 9fb7805253f42f75dd18b140cf62180b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 9.4E-83 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 M634_00790 9fb7805253f42f75dd18b140cf62180b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 9.4E-83 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 M634_00790 9fb7805253f42f75dd18b140cf62180b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 9.4E-83 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 M634_00790 9fb7805253f42f75dd18b140cf62180b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 9.4E-83 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 M634_00790 9fb7805253f42f75dd18b140cf62180b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 9.4E-83 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 M634_00790 9fb7805253f42f75dd18b140cf62180b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 9.4E-83 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 M634_00790 9fb7805253f42f75dd18b140cf62180b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 9.4E-83 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 M634_00790 9fb7805253f42f75dd18b140cf62180b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 9.4E-83 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 M634_00790 9fb7805253f42f75dd18b140cf62180b 320 SUPERFAMILY SSF53784 3 310 4.45E-112 T 12-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 M634_00790 9fb7805253f42f75dd18b140cf62180b 320 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 301 2.1E-129 T 12-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 M634_00790 9fb7805253f42f75dd18b140cf62180b 320 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 320 47.319 T 12-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 M634_00790 9fb7805253f42f75dd18b140cf62180b 320 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 12-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 M634_00790 9fb7805253f42f75dd18b140cf62180b 320 Pfam PF00365 Phosphofructokinase 4 276 8.6E-109 T 12-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 M634_00790 9fb7805253f42f75dd18b140cf62180b 320 Gene3D G3DSA:3.40.50.450 4 287 1.2E-116 T 12-10-2018 M634_00790 9fb7805253f42f75dd18b140cf62180b 320 PIRSF PIRSF000532 1 320 2.3E-127 T 12-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 M634_01990 c21ce7dbb5a86d5d8cc8e774d62c79ac 507 SUPERFAMILY SSF54211 2 169 1.25E-31 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M634_01990 c21ce7dbb5a86d5d8cc8e774d62c79ac 507 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 493 2.7E-29 T 12-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain M634_01990 c21ce7dbb5a86d5d8cc8e774d62c79ac 507 Gene3D G3DSA:3.40.50.300 191 499 7.1E-56 T 12-10-2018 M634_01990 c21ce7dbb5a86d5d8cc8e774d62c79ac 507 SMART SM00382 210 390 3.9E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_01990 c21ce7dbb5a86d5d8cc8e774d62c79ac 507 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 391 5.4E-90 T 12-10-2018 IPR000523 Magnesium chelatase ChlI domain M634_01990 c21ce7dbb5a86d5d8cc8e774d62c79ac 507 Gene3D G3DSA:3.30.230.10 1 166 5.8E-7 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M634_01990 c21ce7dbb5a86d5d8cc8e774d62c79ac 507 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 2.0E-48 T 12-10-2018 M634_01990 c21ce7dbb5a86d5d8cc8e774d62c79ac 507 SUPERFAMILY SSF52540 188 501 3.57E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_01990 c21ce7dbb5a86d5d8cc8e774d62c79ac 507 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 493 7.4E-210 T 12-10-2018 IPR004482 Mg chelatase-related protein M634_01990 c21ce7dbb5a86d5d8cc8e774d62c79ac 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 289 303 7.6E-5 T 12-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 M634_01990 c21ce7dbb5a86d5d8cc8e774d62c79ac 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 7.6E-5 T 12-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 M634_01990 c21ce7dbb5a86d5d8cc8e774d62c79ac 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 317 330 7.6E-5 T 12-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 M634_18930 365ce895865fccb1c5637c6d9eabbb12 721 Gene3D G3DSA:3.40.50.1820 60 713 2.0E-248 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_18930 365ce895865fccb1c5637c6d9eabbb12 721 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 42 443 6.7E-95 T 12-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 M634_18930 365ce895865fccb1c5637c6d9eabbb12 721 Pfam PF00326 Prolyl oligopeptidase family 505 720 5.2E-69 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 M634_18930 365ce895865fccb1c5637c6d9eabbb12 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 514 538 4.4E-51 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M634_18930 365ce895865fccb1c5637c6d9eabbb12 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 572 592 4.4E-51 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M634_18930 365ce895865fccb1c5637c6d9eabbb12 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 630 645 4.4E-51 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M634_18930 365ce895865fccb1c5637c6d9eabbb12 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 648 670 4.4E-51 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M634_18930 365ce895865fccb1c5637c6d9eabbb12 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 488 506 4.4E-51 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M634_18930 365ce895865fccb1c5637c6d9eabbb12 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 542 561 4.4E-51 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M634_18930 365ce895865fccb1c5637c6d9eabbb12 721 Gene3D G3DSA:2.130.10.120 111 445 2.0E-248 T 12-10-2018 M634_18930 365ce895865fccb1c5637c6d9eabbb12 721 SUPERFAMILY SSF53474 455 699 2.18E-40 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_18930 365ce895865fccb1c5637c6d9eabbb12 721 SUPERFAMILY SSF50993 39 451 9.68E-95 T 12-10-2018 M634_04595 31ef18675ff7a56bdaf0645b409ce419 370 Gene3D G3DSA:3.30.420.40 146 329 4.5E-133 T 12-10-2018 M634_04595 31ef18675ff7a56bdaf0645b409ce419 370 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 6 368 1.8E-167 T 12-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 M634_04595 31ef18675ff7a56bdaf0645b409ce419 370 Gene3D G3DSA:3.30.420.40 12 364 4.5E-133 T 12-10-2018 M634_04595 31ef18675ff7a56bdaf0645b409ce419 370 SUPERFAMILY SSF53067 6 343 3.2E-28 T 12-10-2018 M634_04595 31ef18675ff7a56bdaf0645b409ce419 370 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 5 369 41.854 T 12-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 M634_07890 c6b6ec222b27b7703e834ba7d7934fb4 386 Pfam PF13416 Bacterial extracellular solute-binding protein 61 353 5.1E-21 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein M634_07890 c6b6ec222b27b7703e834ba7d7934fb4 386 Gene3D G3DSA:3.40.190.10 158 383 5.0E-15 T 12-10-2018 M634_07890 c6b6ec222b27b7703e834ba7d7934fb4 386 PIRSF PIRSF029172 1 386 1.2E-178 T 12-10-2018 IPR027020 Protein ynjB M634_07890 c6b6ec222b27b7703e834ba7d7934fb4 386 SUPERFAMILY SSF53850 38 384 2.32E-40 T 12-10-2018 M634_07890 c6b6ec222b27b7703e834ba7d7934fb4 386 Gene3D G3DSA:3.40.190.10 74 359 5.0E-15 T 12-10-2018 M634_08745 355728658f35809b306992667230757e 472 Pfam PF00939 Sodium:sulfate symporter transmembrane region 5 462 1.0E-51 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 M634_08745 355728658f35809b306992667230757e 472 PIRSF PIRSF002457 1 472 5.1E-122 T 12-10-2018 IPR030676 Citrate carrier CitT-related M634_08745 355728658f35809b306992667230757e 472 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 35 462 7.5E-80 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 M634_23860 8a725e47b651554e056f0248a49297ba 387 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 123 245 6.2E-36 T 12-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23860 8a725e47b651554e056f0248a49297ba 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 85 97 8.7E-40 T 12-10-2018 M634_23860 8a725e47b651554e056f0248a49297ba 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 210 227 8.7E-40 T 12-10-2018 M634_23860 8a725e47b651554e056f0248a49297ba 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 97 117 8.7E-40 T 12-10-2018 M634_23860 8a725e47b651554e056f0248a49297ba 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 190 210 8.7E-40 T 12-10-2018 M634_23860 8a725e47b651554e056f0248a49297ba 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 119 138 8.7E-40 T 12-10-2018 M634_23860 8a725e47b651554e056f0248a49297ba 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 228 245 8.7E-40 T 12-10-2018 M634_23860 8a725e47b651554e056f0248a49297ba 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 166 187 8.7E-40 T 12-10-2018 M634_23860 8a725e47b651554e056f0248a49297ba 387 SUPERFAMILY SSF46626 225 367 1.98E-26 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_23860 8a725e47b651554e056f0248a49297ba 387 SUPERFAMILY SSF81464 15 117 2.29E-28 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23860 8a725e47b651554e056f0248a49297ba 387 SUPERFAMILY SSF49503 121 260 8.12E-54 T 12-10-2018 IPR008972 Cupredoxin M634_23860 8a725e47b651554e056f0248a49297ba 387 Gene3D G3DSA:1.10.287.90 25 119 1.4E-26 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23860 8a725e47b651554e056f0248a49297ba 387 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 283 356 8.4E-11 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23860 8a725e47b651554e056f0248a49297ba 387 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 191 239 - T 12-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23860 8a725e47b651554e056f0248a49297ba 387 Gene3D G3DSA:2.60.40.420 120 259 5.1E-54 T 12-10-2018 IPR008972 Cupredoxin M634_23860 8a725e47b651554e056f0248a49297ba 387 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 37 255 3.8E-61 T 12-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23860 8a725e47b651554e056f0248a49297ba 387 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 28 108 7.7E-17 T 12-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23860 8a725e47b651554e056f0248a49297ba 387 Gene3D G3DSA:1.10.760.10 263 387 1.7E-31 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_03740 5d2dbaa3ecab8f3f0e963a446b11de62 164 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 159 2.1E-63 T 12-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 M634_03740 5d2dbaa3ecab8f3f0e963a446b11de62 164 Gene3D G3DSA:3.30.70.1150 80 157 5.6E-28 T 12-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal M634_03740 5d2dbaa3ecab8f3f0e963a446b11de62 164 Gene3D G3DSA:3.30.70.260 1 78 4.0E-33 T 12-10-2018 M634_03740 5d2dbaa3ecab8f3f0e963a446b11de62 164 SUPERFAMILY SSF55021 79 162 6.51E-27 T 12-10-2018 M634_03740 5d2dbaa3ecab8f3f0e963a446b11de62 164 Pfam PF13710 ACT domain 11 73 9.8E-18 T 12-10-2018 M634_03740 5d2dbaa3ecab8f3f0e963a446b11de62 164 Pfam PF10369 Small subunit of acetolactate synthase 84 158 2.5E-25 T 12-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 M634_03740 5d2dbaa3ecab8f3f0e963a446b11de62 164 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 75 2.0E-37 T 12-10-2018 M634_03740 5d2dbaa3ecab8f3f0e963a446b11de62 164 SUPERFAMILY SSF55021 1 75 2.69E-22 T 12-10-2018 M634_15175 b8d60124ca077d8108425db2a35a43cc 347 ProSitePatterns PS00321 recA signature. 213 221 - T 12-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 M634_15175 b8d60124ca077d8108425db2a35a43cc 347 SMART SM00382 57 228 4.8E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_15175 b8d60124ca077d8108425db2a35a43cc 347 Pfam PF00154 recA bacterial DNA recombination protein 7 267 1.0E-142 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 M634_15175 b8d60124ca077d8108425db2a35a43cc 347 Gene3D G3DSA:3.30.250.10 268 326 3.1E-26 T 12-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal M634_15175 b8d60124ca077d8108425db2a35a43cc 347 PRINTS PR00142 RecA protein signature 93 122 2.9E-84 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 M634_15175 b8d60124ca077d8108425db2a35a43cc 347 PRINTS PR00142 RecA protein signature 243 272 2.9E-84 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 M634_15175 b8d60124ca077d8108425db2a35a43cc 347 PRINTS PR00142 RecA protein signature 297 314 2.9E-84 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 M634_15175 b8d60124ca077d8108425db2a35a43cc 347 PRINTS PR00142 RecA protein signature 210 238 2.9E-84 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 M634_15175 b8d60124ca077d8108425db2a35a43cc 347 PRINTS PR00142 RecA protein signature 127 156 2.9E-84 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 M634_15175 b8d60124ca077d8108425db2a35a43cc 347 PRINTS PR00142 RecA protein signature 165 194 2.9E-84 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 M634_15175 b8d60124ca077d8108425db2a35a43cc 347 Gene3D G3DSA:3.40.50.300 26 267 1.4E-82 T 12-10-2018 M634_15175 b8d60124ca077d8108425db2a35a43cc 347 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 8.2E-170 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 M634_15175 b8d60124ca077d8108425db2a35a43cc 347 SUPERFAMILY SSF54752 269 325 2.09E-21 T 12-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal M634_15175 b8d60124ca077d8108425db2a35a43cc 347 Hamap MF_00268 Protein RecA [recA]. 5 329 50.595 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 M634_15175 b8d60124ca077d8108425db2a35a43cc 347 SUPERFAMILY SSF52540 4 266 4.02E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_02755 2a7afa695adf4510b210adb2a4091684 626 Gene3D G3DSA:2.40.70.10 216 333 3.4E-7 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily M634_02755 2a7afa695adf4510b210adb2a4091684 626 Gene3D G3DSA:2.40.70.10 110 204 1.9E-9 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily M634_02755 2a7afa695adf4510b210adb2a4091684 626 Gene3D G3DSA:2.40.70.10 489 611 5.6E-31 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily M634_02755 2a7afa695adf4510b210adb2a4091684 626 Pfam PF05618 Putative ATP-dependant zinc protease 499 620 6.8E-24 T 12-10-2018 M634_02755 2a7afa695adf4510b210adb2a4091684 626 SUPERFAMILY SSF50630 491 617 9.15E-32 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily M634_02755 2a7afa695adf4510b210adb2a4091684 626 SUPERFAMILY SSF50630 357 482 4.44E-10 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily M634_02755 2a7afa695adf4510b210adb2a4091684 626 SUPERFAMILY SSF50630 219 340 1.91E-19 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily M634_02755 2a7afa695adf4510b210adb2a4091684 626 SUPERFAMILY SSF50630 42 211 8.45E-22 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily M634_01460 9565e7a0dfaf308ecf6c671dfc110137 312 SUPERFAMILY SSF53850 6 220 5.1E-86 T 12-10-2018 M634_01460 9565e7a0dfaf308ecf6c671dfc110137 312 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 6 298 40.423 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 M634_01460 9565e7a0dfaf308ecf6c671dfc110137 312 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 7 213 4.6E-80 T 12-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 M634_01460 9565e7a0dfaf308ecf6c671dfc110137 312 Gene3D G3DSA:3.40.190.10 104 203 1.3E-85 T 12-10-2018 M634_01460 9565e7a0dfaf308ecf6c671dfc110137 312 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 232 248 - T 12-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 M634_01460 9565e7a0dfaf308ecf6c671dfc110137 312 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 228 296 3.9E-20 T 12-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 M634_01460 9565e7a0dfaf308ecf6c671dfc110137 312 SUPERFAMILY SSF54782 221 310 5.89E-28 T 12-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 M634_01460 9565e7a0dfaf308ecf6c671dfc110137 312 PRINTS PR00151 Porphobilinogen deaminase signature 46 66 2.3E-47 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 M634_01460 9565e7a0dfaf308ecf6c671dfc110137 312 PRINTS PR00151 Porphobilinogen deaminase signature 125 142 2.3E-47 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 M634_01460 9565e7a0dfaf308ecf6c671dfc110137 312 PRINTS PR00151 Porphobilinogen deaminase signature 144 161 2.3E-47 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 M634_01460 9565e7a0dfaf308ecf6c671dfc110137 312 PRINTS PR00151 Porphobilinogen deaminase signature 77 96 2.3E-47 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 M634_01460 9565e7a0dfaf308ecf6c671dfc110137 312 PRINTS PR00151 Porphobilinogen deaminase signature 231 248 2.3E-47 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 M634_01460 9565e7a0dfaf308ecf6c671dfc110137 312 PIRSF PIRSF001438 1 312 1.1E-123 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 M634_01460 9565e7a0dfaf308ecf6c671dfc110137 312 Gene3D G3DSA:3.30.160.40 222 307 6.3E-28 T 12-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 M634_01460 9565e7a0dfaf308ecf6c671dfc110137 312 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 7 298 8.7E-116 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 M634_01460 9565e7a0dfaf308ecf6c671dfc110137 312 Gene3D G3DSA:3.40.190.10 7 211 1.3E-85 T 12-10-2018 M634_09825 a8b1e0b1c749b3b6d946561d5c481de6 679 PRINTS PR00344 Bacterial sensor protein C-terminal signature 629 647 1.6E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_09825 a8b1e0b1c749b3b6d946561d5c481de6 679 PRINTS PR00344 Bacterial sensor protein C-terminal signature 653 666 1.6E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_09825 a8b1e0b1c749b3b6d946561d5c481de6 679 PRINTS PR00344 Bacterial sensor protein C-terminal signature 600 614 1.6E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_09825 a8b1e0b1c749b3b6d946561d5c481de6 679 PRINTS PR00344 Bacterial sensor protein C-terminal signature 618 628 1.6E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_09825 a8b1e0b1c749b3b6d946561d5c481de6 679 SUPERFAMILY SSF55874 505 667 1.44E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_09825 a8b1e0b1c749b3b6d946561d5c481de6 679 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 562 667 5.8E-18 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_09825 a8b1e0b1c749b3b6d946561d5c481de6 679 Pfam PF00512 His Kinase A (phospho-acceptor) domain 448 513 3.2E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_09825 a8b1e0b1c749b3b6d946561d5c481de6 679 SMART SM00387 558 669 1.7E-26 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_09825 a8b1e0b1c749b3b6d946561d5c481de6 679 Pfam PF17202 Single cache domain 3 204 318 8.8E-28 T 12-10-2018 IPR033463 Single cache domain 3 M634_09825 a8b1e0b1c749b3b6d946561d5c481de6 679 SUPERFAMILY SSF47384 442 512 1.04E-11 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M634_09825 a8b1e0b1c749b3b6d946561d5c481de6 679 SMART SM00388 448 515 2.4E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_09825 a8b1e0b1c749b3b6d946561d5c481de6 679 Gene3D G3DSA:3.30.565.10 520 672 1.3E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_09825 a8b1e0b1c749b3b6d946561d5c481de6 679 SUPERFAMILY SSF103190 178 310 2.88E-13 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily M634_09825 a8b1e0b1c749b3b6d946561d5c481de6 679 Gene3D G3DSA:1.10.287.130 440 513 1.2E-21 T 12-10-2018 M634_00745 157832b0b04d1ded56020c858776b506 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 49.455 T 12-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 M634_00745 157832b0b04d1ded56020c858776b506 188 SMART SM00841 131 186 3.0E-31 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 M634_00745 157832b0b04d1ded56020c858776b506 188 SUPERFAMILY SSF50104 2 64 2.26E-20 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily M634_00745 157832b0b04d1ded56020c858776b506 188 SUPERFAMILY SSF50249 70 128 1.93E-17 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_00745 157832b0b04d1ded56020c858776b506 188 PIRSF PIRSF005901 2 188 3.1E-63 T 12-10-2018 IPR020599 Translation elongation factor P/YeiP M634_00745 157832b0b04d1ded56020c858776b506 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 12-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site M634_00745 157832b0b04d1ded56020c858776b506 188 TIGRFAM TIGR00038 efp: translation elongation factor P 5 187 2.1E-77 T 12-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 M634_00745 157832b0b04d1ded56020c858776b506 188 SUPERFAMILY SSF50249 130 187 4.63E-18 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_00745 157832b0b04d1ded56020c858776b506 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 1.3E-25 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 M634_00745 157832b0b04d1ded56020c858776b506 188 Gene3D G3DSA:2.30.30.30 1 64 9.0E-26 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 M634_00745 157832b0b04d1ded56020c858776b506 188 Gene3D G3DSA:2.40.50.140 130 188 2.5E-27 T 12-10-2018 M634_00745 157832b0b04d1ded56020c858776b506 188 Gene3D G3DSA:2.40.50.140 66 129 4.7E-29 T 12-10-2018 M634_00745 157832b0b04d1ded56020c858776b506 188 SMART SM01185 69 123 9.4E-26 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 M634_00745 157832b0b04d1ded56020c858776b506 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 1.2E-22 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 M634_00745 157832b0b04d1ded56020c858776b506 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 61 3.4E-24 T 12-10-2018 IPR013185 Translation elongation factor, KOW-like M634_02070 55ca7751ba0e80ffaa089a3b44850af4 172 PIRSF PIRSF004749 1 172 5.0E-57 T 12-10-2018 IPR023635 Peptide deformylase M634_02070 55ca7751ba0e80ffaa089a3b44850af4 172 PRINTS PR01576 Peptide deformylase signature 33 62 7.5E-38 T 12-10-2018 IPR023635 Peptide deformylase M634_02070 55ca7751ba0e80ffaa089a3b44850af4 172 PRINTS PR01576 Peptide deformylase signature 101 119 7.5E-38 T 12-10-2018 IPR023635 Peptide deformylase M634_02070 55ca7751ba0e80ffaa089a3b44850af4 172 PRINTS PR01576 Peptide deformylase signature 120 149 7.5E-38 T 12-10-2018 IPR023635 Peptide deformylase M634_02070 55ca7751ba0e80ffaa089a3b44850af4 172 PRINTS PR01576 Peptide deformylase signature 89 100 7.5E-38 T 12-10-2018 IPR023635 Peptide deformylase M634_02070 55ca7751ba0e80ffaa089a3b44850af4 172 SUPERFAMILY SSF56420 3 165 4.19E-63 T 12-10-2018 IPR036821 Peptide deformylase superfamily M634_02070 55ca7751ba0e80ffaa089a3b44850af4 172 Hamap MF_00163 Peptide deformylase [def]. 2 162 31.079 T 12-10-2018 IPR023635 Peptide deformylase M634_02070 55ca7751ba0e80ffaa089a3b44850af4 172 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 159 3.5E-62 T 12-10-2018 IPR023635 Peptide deformylase M634_02070 55ca7751ba0e80ffaa089a3b44850af4 172 Pfam PF01327 Polypeptide deformylase 4 152 1.1E-50 T 12-10-2018 IPR023635 Peptide deformylase M634_02070 55ca7751ba0e80ffaa089a3b44850af4 172 Gene3D G3DSA:3.90.45.10 1 169 6.6E-67 T 12-10-2018 IPR036821 Peptide deformylase superfamily M634_04155 27127fcdd94d49d4920e644610f7118e 316 Gene3D G3DSA:3.40.50.150 10 315 6.1E-102 T 12-10-2018 M634_04155 27127fcdd94d49d4920e644610f7118e 316 PIRSF PIRSF004486 1 316 1.7E-101 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 M634_04155 27127fcdd94d49d4920e644610f7118e 316 SUPERFAMILY SSF81799 113 216 3.53E-31 T 12-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 M634_04155 27127fcdd94d49d4920e644610f7118e 316 Gene3D G3DSA:1.10.150.170 112 218 6.1E-102 T 12-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 M634_04155 27127fcdd94d49d4920e644610f7118e 316 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 316 38.128 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 M634_04155 27127fcdd94d49d4920e644610f7118e 316 Pfam PF01795 MraW methylase family 5 315 4.6E-110 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 M634_04155 27127fcdd94d49d4920e644610f7118e 316 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 315 4.3E-119 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 M634_04155 27127fcdd94d49d4920e644610f7118e 316 SUPERFAMILY SSF53335 7 316 6.94E-45 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_10065 98a193726dd051400991ba74e6a57cd0 1379 Pfam PF04408 Helicase associated domain (HA2) 547 638 4.7E-18 T 12-10-2018 IPR007502 Helicase-associated domain GO:0004386 M634_10065 98a193726dd051400991ba74e6a57cd0 1379 SMART SM00490 385 485 3.1E-15 T 12-10-2018 IPR001650 Helicase, C-terminal M634_10065 98a193726dd051400991ba74e6a57cd0 1379 Pfam PF00271 Helicase conserved C-terminal domain 370 484 1.9E-11 T 12-10-2018 IPR001650 Helicase, C-terminal M634_10065 98a193726dd051400991ba74e6a57cd0 1379 SUPERFAMILY SSF52540 156 648 3.43E-116 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_10065 98a193726dd051400991ba74e6a57cd0 1379 Pfam PF00270 DEAD/DEAH box helicase 169 315 4.3E-8 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 M634_10065 98a193726dd051400991ba74e6a57cd0 1379 Gene3D G3DSA:1.20.120.1080 529 629 2.8E-18 T 12-10-2018 M634_10065 98a193726dd051400991ba74e6a57cd0 1379 SMART SM00487 157 341 2.3E-31 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M634_10065 98a193726dd051400991ba74e6a57cd0 1379 Gene3D G3DSA:3.40.50.300 335 502 9.5E-56 T 12-10-2018 M634_10065 98a193726dd051400991ba74e6a57cd0 1379 SMART SM00382 174 465 3.6E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_10065 98a193726dd051400991ba74e6a57cd0 1379 SMART SM00847 545 640 9.6E-37 T 12-10-2018 IPR007502 Helicase-associated domain GO:0004386 M634_10065 98a193726dd051400991ba74e6a57cd0 1379 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 96 1377 0.0 T 12-10-2018 IPR010222 RNA helicase HrpA GO:0004004 M634_10065 98a193726dd051400991ba74e6a57cd0 1379 Gene3D G3DSA:3.40.50.300 110 334 8.1E-79 T 12-10-2018 M634_10065 98a193726dd051400991ba74e6a57cd0 1379 Pfam PF11898 Domain of unknown function (DUF3418) 793 1377 1.2E-232 T 12-10-2018 IPR024590 RNA helicase HrpA, C-terminal M634_10065 98a193726dd051400991ba74e6a57cd0 1379 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 703 779 7.1E-23 T 12-10-2018 IPR011709 Domain of unknown function DUF1605 M634_22215 2b81a2ffee8da80a53b1f0c7517a77f0 306 Gene3D G3DSA:3.40.190.10 97 282 4.9E-35 T 12-10-2018 M634_22215 2b81a2ffee8da80a53b1f0c7517a77f0 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 2.3E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_22215 2b81a2ffee8da80a53b1f0c7517a77f0 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 2.3E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_22215 2b81a2ffee8da80a53b1f0c7517a77f0 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 2.3E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_22215 2b81a2ffee8da80a53b1f0c7517a77f0 306 Gene3D G3DSA:1.10.10.10 8 94 4.5E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_22215 2b81a2ffee8da80a53b1f0c7517a77f0 306 SUPERFAMILY SSF46785 3 116 4.54E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_22215 2b81a2ffee8da80a53b1f0c7517a77f0 306 Gene3D G3DSA:3.40.190.10 170 273 4.9E-35 T 12-10-2018 M634_22215 2b81a2ffee8da80a53b1f0c7517a77f0 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 2.9E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_22215 2b81a2ffee8da80a53b1f0c7517a77f0 306 SUPERFAMILY SSF53850 95 290 3.88E-38 T 12-10-2018 M634_22215 2b81a2ffee8da80a53b1f0c7517a77f0 306 Pfam PF03466 LysR substrate binding domain 95 289 1.8E-42 T 12-10-2018 IPR005119 LysR, substrate-binding M634_18555 04fd00cc093e1792fa5ea5240b2013d2 216 SUPERFAMILY SSF141571 6 51 3.27E-9 T 12-10-2018 M634_18555 04fd00cc093e1792fa5ea5240b2013d2 216 Pfam PF13599 Pentapeptide repeats (9 copies) 113 166 3.9E-9 T 12-10-2018 IPR001646 Pentapeptide repeat M634_18555 04fd00cc093e1792fa5ea5240b2013d2 216 Pfam PF00805 Pentapeptide repeats (8 copies) 54 74 0.0092 T 12-10-2018 IPR001646 Pentapeptide repeat M634_18555 04fd00cc093e1792fa5ea5240b2013d2 216 Pfam PF00805 Pentapeptide repeats (8 copies) 17 48 4.7E-6 T 12-10-2018 IPR001646 Pentapeptide repeat M634_18555 04fd00cc093e1792fa5ea5240b2013d2 216 Pfam PF00805 Pentapeptide repeats (8 copies) 79 105 5.2E-5 T 12-10-2018 IPR001646 Pentapeptide repeat M634_18555 04fd00cc093e1792fa5ea5240b2013d2 216 SUPERFAMILY SSF141571 53 215 9.03E-36 T 12-10-2018 M634_18555 04fd00cc093e1792fa5ea5240b2013d2 216 Gene3D G3DSA:2.160.20.80 3 216 2.7E-56 T 12-10-2018 M634_15470 d73113a095805ec11f8a4d746546cde8 316 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 311 4.3E-140 T 12-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 M634_15470 d73113a095805ec11f8a4d746546cde8 316 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 1.8E-80 T 12-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 M634_15470 d73113a095805ec11f8a4d746546cde8 316 Gene3D G3DSA:3.40.50.20 1 129 1.5E-52 T 12-10-2018 M634_15470 d73113a095805ec11f8a4d746546cde8 316 SUPERFAMILY SSF52440 2 122 3.16E-46 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily M634_15470 d73113a095805ec11f8a4d746546cde8 316 Gene3D G3DSA:3.30.1490.20 137 196 1.8E-29 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 M634_15470 d73113a095805ec11f8a4d746546cde8 316 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 3.1E-48 T 12-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 M634_15470 d73113a095805ec11f8a4d746546cde8 316 Gene3D G3DSA:3.30.470.20 197 300 1.3E-40 T 12-10-2018 M634_15470 d73113a095805ec11f8a4d746546cde8 316 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 177.412 T 12-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 M634_15470 d73113a095805ec11f8a4d746546cde8 316 SUPERFAMILY SSF56059 123 313 5.82E-59 T 12-10-2018 M634_06330 5c280d74111c43c41842ed9a466da3cd 636 Pfam PF13307 Helicase C-terminal domain 462 619 5.8E-34 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 M634_06330 5c280d74111c43c41842ed9a466da3cd 636 SMART SM00487 17 310 0.0027 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M634_06330 5c280d74111c43c41842ed9a466da3cd 636 SMART SM00491 477 606 2.0E-45 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 M634_06330 5c280d74111c43c41842ed9a466da3cd 636 Gene3D G3DSA:3.40.50.300 445 635 5.6E-36 T 12-10-2018 M634_06330 5c280d74111c43c41842ed9a466da3cd 636 Pfam PF04851 Type III restriction enzyme, res subunit 19 235 2.3E-5 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 M634_06330 5c280d74111c43c41842ed9a466da3cd 636 SUPERFAMILY SSF52540 14 236 6.3E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_06330 5c280d74111c43c41842ed9a466da3cd 636 SUPERFAMILY SSF52540 42 601 2.66E-11 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_06330 5c280d74111c43c41842ed9a466da3cd 636 Gene3D G3DSA:3.40.50.300 19 286 1.2E-49 T 12-10-2018 M634_22720 0d9342710c4b67222d6a33e1260f769c 202 Gene3D G3DSA:3.40.50.12740 2 202 1.2E-52 T 12-10-2018 M634_22720 0d9342710c4b67222d6a33e1260f769c 202 Pfam PF00072 Response regulator receiver domain 4 113 1.0E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_22720 0d9342710c4b67222d6a33e1260f769c 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 2.2E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_22720 0d9342710c4b67222d6a33e1260f769c 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 2.2E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_22720 0d9342710c4b67222d6a33e1260f769c 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 2.2E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_22720 0d9342710c4b67222d6a33e1260f769c 202 ProSitePatterns PS00622 LuxR-type HTH domain signature. 157 184 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_22720 0d9342710c4b67222d6a33e1260f769c 202 SMART SM00421 140 197 1.3E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_22720 0d9342710c4b67222d6a33e1260f769c 202 SUPERFAMILY SSF46894 125 198 2.11E-18 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M634_22720 0d9342710c4b67222d6a33e1260f769c 202 SMART SM00448 2 112 5.2E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_22720 0d9342710c4b67222d6a33e1260f769c 202 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 196 4.8E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_22720 0d9342710c4b67222d6a33e1260f769c 202 SUPERFAMILY SSF52172 1 123 5.69E-27 T 12-10-2018 IPR011006 CheY-like superfamily M634_01175 cf85646fdea34c212f259466dd89aa40 446 Pfam PF13091 PLD-like domain 34 149 2.4E-7 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 M634_01175 cf85646fdea34c212f259466dd89aa40 446 Pfam PF13091 PLD-like domain 251 402 2.9E-24 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 M634_01175 cf85646fdea34c212f259466dd89aa40 446 Gene3D G3DSA:3.30.870.10 18 225 4.2E-164 T 12-10-2018 M634_01175 cf85646fdea34c212f259466dd89aa40 446 Gene3D G3DSA:3.30.870.10 12 441 4.2E-164 T 12-10-2018 M634_01175 cf85646fdea34c212f259466dd89aa40 446 SUPERFAMILY SSF56024 14 181 6.02E-26 T 12-10-2018 M634_01175 cf85646fdea34c212f259466dd89aa40 446 SUPERFAMILY SSF56024 248 425 6.02E-27 T 12-10-2018 M634_01175 cf85646fdea34c212f259466dd89aa40 446 PIRSF PIRSF000850 2 446 1.7E-213 T 12-10-2018 M634_01175 cf85646fdea34c212f259466dd89aa40 446 SMART SM00155 347 374 0.0078 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 M634_01175 cf85646fdea34c212f259466dd89aa40 446 SMART SM00155 126 152 7.7E-4 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 M634_02660 bb8d16d25b8a64e1f83505759b710d84 307 Gene3D G3DSA:2.30.42.10 204 307 6.8E-26 T 12-10-2018 M634_02660 bb8d16d25b8a64e1f83505759b710d84 307 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 34 307 9.4E-74 T 12-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 M634_02660 bb8d16d25b8a64e1f83505759b710d84 307 Pfam PF11356 Type II secretion system protein C 37 177 3.1E-43 T 12-10-2018 IPR024961 Type II secretion system protein C, N-terminal M634_02660 bb8d16d25b8a64e1f83505759b710d84 307 ProSitePatterns PS01141 Bacterial type II secretion system protein C signature. 245 271 - T 12-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 M634_02660 bb8d16d25b8a64e1f83505759b710d84 307 Gene3D G3DSA:2.30.30.830 111 178 1.1E-27 T 12-10-2018 M634_02660 bb8d16d25b8a64e1f83505759b710d84 307 SUPERFAMILY SSF50156 211 307 5.46E-19 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 M634_05320 7d12f137d212f43f2113c963264973f1 217 Pfam PF00677 Lumazine binding domain 3 87 6.6E-21 T 12-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 M634_05320 7d12f137d212f43f2113c963264973f1 217 Pfam PF00677 Lumazine binding domain 100 184 2.0E-24 T 12-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 M634_05320 7d12f137d212f43f2113c963264973f1 217 PIRSF PIRSF000498 1 211 1.8E-80 T 12-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 M634_05320 7d12f137d212f43f2113c963264973f1 217 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 201 3.4E-67 T 12-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 M634_05320 7d12f137d212f43f2113c963264973f1 217 SUPERFAMILY SSF63380 93 198 6.12E-33 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel M634_05320 7d12f137d212f43f2113c963264973f1 217 SUPERFAMILY SSF63380 1 89 1.79E-25 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel M634_05320 7d12f137d212f43f2113c963264973f1 217 Gene3D G3DSA:2.40.30.20 1 89 9.1E-28 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M634_05320 7d12f137d212f43f2113c963264973f1 217 Gene3D G3DSA:2.40.30.20 102 205 3.2E-36 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M634_16885 8fcb67d502b23b3d2d8432d5b6cbc176 393 Gene3D G3DSA:1.20.1250.20 6 196 3.1E-6 T 12-10-2018 M634_16885 8fcb67d502b23b3d2d8432d5b6cbc176 393 SUPERFAMILY SSF103473 14 378 2.49E-36 T 12-10-2018 IPR036259 MFS transporter superfamily M634_16885 8fcb67d502b23b3d2d8432d5b6cbc176 393 Gene3D G3DSA:1.20.1250.20 200 385 9.5E-16 T 12-10-2018 M634_16885 8fcb67d502b23b3d2d8432d5b6cbc176 393 Pfam PF07690 Major Facilitator Superfamily 15 345 1.6E-14 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M634_07465 ad754ffc9f4ebbb392cf8c87f3b3ec6d 435 SUPERFAMILY SSF55681 118 429 2.99E-97 T 12-10-2018 M634_07465 ad754ffc9f4ebbb392cf8c87f3b3ec6d 435 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 428 7.6E-172 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 M634_07465 ad754ffc9f4ebbb392cf8c87f3b3ec6d 435 SUPERFAMILY SSF46589 1 114 2.93E-27 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 M634_07465 ad754ffc9f4ebbb392cf8c87f3b3ec6d 435 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 228 411 3.8E-35 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 M634_07465 ad754ffc9f4ebbb392cf8c87f3b3ec6d 435 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 109 2.1E-29 T 12-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 M634_07465 ad754ffc9f4ebbb392cf8c87f3b3ec6d 435 PIRSF PIRSF001529 1 435 1.2E-186 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 M634_07465 ad754ffc9f4ebbb392cf8c87f3b3ec6d 435 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 433 40.153 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 M634_07465 ad754ffc9f4ebbb392cf8c87f3b3ec6d 435 PRINTS PR00981 Seryl-tRNA synthetase signature 327 340 2.1E-33 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 M634_07465 ad754ffc9f4ebbb392cf8c87f3b3ec6d 435 PRINTS PR00981 Seryl-tRNA synthetase signature 344 360 2.1E-33 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 M634_07465 ad754ffc9f4ebbb392cf8c87f3b3ec6d 435 PRINTS PR00981 Seryl-tRNA synthetase signature 275 287 2.1E-33 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 M634_07465 ad754ffc9f4ebbb392cf8c87f3b3ec6d 435 PRINTS PR00981 Seryl-tRNA synthetase signature 287 300 2.1E-33 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 M634_07465 ad754ffc9f4ebbb392cf8c87f3b3ec6d 435 PRINTS PR00981 Seryl-tRNA synthetase signature 362 378 2.1E-33 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 M634_07465 ad754ffc9f4ebbb392cf8c87f3b3ec6d 435 Gene3D G3DSA:3.30.930.10 107 434 5.3E-113 T 12-10-2018 M634_07465 ad754ffc9f4ebbb392cf8c87f3b3ec6d 435 Gene3D G3DSA:1.10.287.40 1 106 1.9E-20 T 12-10-2018 M634_08635 90e556a6f7456f9606d14dbceba8fbf8 374 Pfam PF07687 Peptidase dimerisation domain 182 273 5.4E-15 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain M634_08635 90e556a6f7456f9606d14dbceba8fbf8 374 Pfam PF01546 Peptidase family M20/M25/M40 73 367 3.6E-17 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 M634_08635 90e556a6f7456f9606d14dbceba8fbf8 374 PIRSF PIRSF001123 283 373 2.2E-4 T 12-10-2018 IPR008007 Peptidase M42 M634_08635 90e556a6f7456f9606d14dbceba8fbf8 374 PIRSF PIRSF001123 99 207 5.3E-4 T 12-10-2018 IPR008007 Peptidase M42 M634_08635 90e556a6f7456f9606d14dbceba8fbf8 374 PIRSF PIRSF001123 6 105 0.049 T 12-10-2018 IPR008007 Peptidase M42 M634_08635 90e556a6f7456f9606d14dbceba8fbf8 374 SUPERFAMILY SSF55031 177 289 4.71E-22 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain M634_08635 90e556a6f7456f9606d14dbceba8fbf8 374 TIGRFAM TIGR01883 PepT-like: peptidase T-like protein 8 362 3.2E-158 T 12-10-2018 IPR010162 Peptidase M20B, peptidase T-like M634_08635 90e556a6f7456f9606d14dbceba8fbf8 374 SUPERFAMILY SSF53187 7 367 2.24E-58 T 12-10-2018 M634_08635 90e556a6f7456f9606d14dbceba8fbf8 374 Gene3D G3DSA:3.30.70.360 176 287 1.4E-112 T 12-10-2018 M634_08635 90e556a6f7456f9606d14dbceba8fbf8 374 Gene3D G3DSA:3.40.630.10 16 362 1.4E-112 T 12-10-2018 M634_08550 e4413c912583b2a5b8869524feb816be 224 SUPERFAMILY SSF46785 9 76 1.76E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_08550 e4413c912583b2a5b8869524feb816be 224 Gene3D G3DSA:1.20.120.530 78 222 1.6E-27 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal M634_08550 e4413c912583b2a5b8869524feb816be 224 SUPERFAMILY SSF48008 78 214 3.66E-26 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal M634_08550 e4413c912583b2a5b8869524feb816be 224 Gene3D G3DSA:1.10.10.10 1 73 2.3E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_08550 e4413c912583b2a5b8869524feb816be 224 SMART SM00895 82 207 2.9E-20 T 12-10-2018 IPR011711 GntR, C-terminal M634_08550 e4413c912583b2a5b8869524feb816be 224 Pfam PF07729 FCD domain 82 206 1.9E-25 T 12-10-2018 IPR011711 GntR, C-terminal M634_08550 e4413c912583b2a5b8869524feb816be 224 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 72 1.5E-17 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_08550 e4413c912583b2a5b8869524feb816be 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 3.7E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_08550 e4413c912583b2a5b8869524feb816be 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 3.7E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_08550 e4413c912583b2a5b8869524feb816be 224 SMART SM00345 14 72 1.5E-17 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_02310 9ee5c3026ee376dcf72f42928aafd998 109 Pfam PF00893 Small Multidrug Resistance protein 7 99 6.8E-19 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 M634_02310 9ee5c3026ee376dcf72f42928aafd998 109 Gene3D G3DSA:1.10.3730.20 7 109 2.9E-21 T 12-10-2018 M634_02310 9ee5c3026ee376dcf72f42928aafd998 109 SUPERFAMILY SSF103481 12 107 5.89E-15 T 12-10-2018 M634_00475 f8860ce18b67ec08ee8d30cf356fe4f5 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 5.1E-26 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 M634_00475 f8860ce18b67ec08ee8d30cf356fe4f5 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 198 208 5.1E-26 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 M634_00475 f8860ce18b67ec08ee8d30cf356fe4f5 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 5.1E-26 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 M634_00475 f8860ce18b67ec08ee8d30cf356fe4f5 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 5.1E-26 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 M634_00475 f8860ce18b67ec08ee8d30cf356fe4f5 338 Pfam PF00579 tRNA synthetases class I (W and Y) 3 289 6.3E-77 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 M634_00475 f8860ce18b67ec08ee8d30cf356fe4f5 338 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 334 1.4E-107 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 M634_00475 f8860ce18b67ec08ee8d30cf356fe4f5 338 Gene3D G3DSA:1.10.240.10 191 304 9.7E-139 T 12-10-2018 M634_00475 f8860ce18b67ec08ee8d30cf356fe4f5 338 SUPERFAMILY SSF52374 5 334 1.84E-90 T 12-10-2018 M634_00475 f8860ce18b67ec08ee8d30cf356fe4f5 338 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 335 40.749 T 12-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 M634_00475 f8860ce18b67ec08ee8d30cf356fe4f5 338 Gene3D G3DSA:3.40.50.620 5 333 9.7E-139 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M634_01815 4331a944e50ffef564da4561e63b0ddc 805 Gene3D G3DSA:3.10.20.690 593 684 5.6E-35 T 12-10-2018 M634_01815 4331a944e50ffef564da4561e63b0ddc 805 SUPERFAMILY SSF54211 221 393 1.1E-58 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M634_01815 4331a944e50ffef564da4561e63b0ddc 805 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 805 107.608 T 12-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 M634_01815 4331a944e50ffef564da4561e63b0ddc 805 SUPERFAMILY SSF55874 4 212 1.96E-74 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_01815 4331a944e50ffef564da4561e63b0ddc 805 SUPERFAMILY SSF56719 395 796 1.07E-87 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 M634_01815 4331a944e50ffef564da4561e63b0ddc 805 Pfam PF01751 Toprim domain 420 532 8.5E-19 T 12-10-2018 IPR006171 TOPRIM domain M634_01815 4331a944e50ffef564da4561e63b0ddc 805 PRINTS PR01159 DNA gyrase subunit B signature 313 329 2.3E-85 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 M634_01815 4331a944e50ffef564da4561e63b0ddc 805 PRINTS PR01159 DNA gyrase subunit B signature 195 208 2.3E-85 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 M634_01815 4331a944e50ffef564da4561e63b0ddc 805 PRINTS PR01159 DNA gyrase subunit B signature 5 15 2.3E-85 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 M634_01815 4331a944e50ffef564da4561e63b0ddc 805 PRINTS PR01159 DNA gyrase subunit B signature 180 195 2.3E-85 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 M634_01815 4331a944e50ffef564da4561e63b0ddc 805 PRINTS PR01159 DNA gyrase subunit B signature 471 480 2.3E-85 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 M634_01815 4331a944e50ffef564da4561e63b0ddc 805 PRINTS PR01159 DNA gyrase subunit B signature 758 770 2.3E-85 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 M634_01815 4331a944e50ffef564da4561e63b0ddc 805 PRINTS PR01159 DNA gyrase subunit B signature 361 375 2.3E-85 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 M634_01815 4331a944e50ffef564da4561e63b0ddc 805 PRINTS PR01159 DNA gyrase subunit B signature 774 790 2.3E-85 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 M634_01815 4331a944e50ffef564da4561e63b0ddc 805 PRINTS PR01159 DNA gyrase subunit B signature 220 242 2.3E-85 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 M634_01815 4331a944e50ffef564da4561e63b0ddc 805 PRINTS PR01159 DNA gyrase subunit B signature 375 395 2.3E-85 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 M634_01815 4331a944e50ffef564da4561e63b0ddc 805 PRINTS PR01159 DNA gyrase subunit B signature 243 261 2.3E-85 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 M634_01815 4331a944e50ffef564da4561e63b0ddc 805 SMART SM00387 31 175 5.2E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_01815 4331a944e50ffef564da4561e63b0ddc 805 Gene3D G3DSA:3.40.50.670 399 572 1.3E-75 T 12-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 M634_01815 4331a944e50ffef564da4561e63b0ddc 805 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 805 0.0 T 12-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 M634_01815 4331a944e50ffef564da4561e63b0ddc 805 Gene3D G3DSA:3.40.50.670 707 804 3.1E-26 T 12-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 M634_01815 4331a944e50ffef564da4561e63b0ddc 805 ProSitePatterns PS00177 DNA topoisomerase II signature. 423 431 - T 12-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 M634_01815 4331a944e50ffef564da4561e63b0ddc 805 Gene3D G3DSA:3.30.230.10 221 393 2.0E-72 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M634_01815 4331a944e50ffef564da4561e63b0ddc 805 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 736 794 1.9E-29 T 12-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 M634_01815 4331a944e50ffef564da4561e63b0ddc 805 Gene3D G3DSA:3.30.565.10 1 220 1.6E-94 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_01815 4331a944e50ffef564da4561e63b0ddc 805 SMART SM00433 35 798 1.8E-272 T 12-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 M634_01815 4331a944e50ffef564da4561e63b0ddc 805 Pfam PF00204 DNA gyrase B 221 391 8.9E-60 T 12-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 M634_01815 4331a944e50ffef564da4561e63b0ddc 805 PRINTS PR00418 DNA topoisomerase II family signature 526 538 4.7E-70 T 12-10-2018 M634_01815 4331a944e50ffef564da4561e63b0ddc 805 PRINTS PR00418 DNA topoisomerase II family signature 70 83 4.7E-70 T 12-10-2018 M634_01815 4331a944e50ffef564da4561e63b0ddc 805 PRINTS PR00418 DNA topoisomerase II family signature 269 282 4.7E-70 T 12-10-2018 M634_01815 4331a944e50ffef564da4561e63b0ddc 805 PRINTS PR00418 DNA topoisomerase II family signature 35 50 4.7E-70 T 12-10-2018 M634_01815 4331a944e50ffef564da4561e63b0ddc 805 PRINTS PR00418 DNA topoisomerase II family signature 113 127 4.7E-70 T 12-10-2018 M634_01815 4331a944e50ffef564da4561e63b0ddc 805 PRINTS PR00418 DNA topoisomerase II family signature 488 504 4.7E-70 T 12-10-2018 M634_01815 4331a944e50ffef564da4561e63b0ddc 805 PRINTS PR00418 DNA topoisomerase II family signature 506 523 4.7E-70 T 12-10-2018 M634_01815 4331a944e50ffef564da4561e63b0ddc 805 PRINTS PR00418 DNA topoisomerase II family signature 421 435 4.7E-70 T 12-10-2018 M634_01815 4331a944e50ffef564da4561e63b0ddc 805 PRINTS PR00418 DNA topoisomerase II family signature 737 753 4.7E-70 T 12-10-2018 M634_01815 4331a944e50ffef564da4561e63b0ddc 805 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 173 8.1E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_13995 4ddb1863b60121da463cfb0438abb06c 874 SUPERFAMILY SSF55021 797 860 3.88E-10 T 12-10-2018 M634_13995 4ddb1863b60121da463cfb0438abb06c 874 SUPERFAMILY SSF81593 187 310 5.02E-9 T 12-10-2018 M634_13995 4ddb1863b60121da463cfb0438abb06c 874 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 874 334.265 T 12-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 M634_13995 4ddb1863b60121da463cfb0438abb06c 874 SUPERFAMILY SSF55021 689 761 2.18E-8 T 12-10-2018 M634_13995 4ddb1863b60121da463cfb0438abb06c 874 Gene3D G3DSA:3.30.70.260 796 872 5.6E-5 T 12-10-2018 M634_13995 4ddb1863b60121da463cfb0438abb06c 874 PIRSF PIRSF006288 7 874 0.0 T 12-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 M634_13995 4ddb1863b60121da463cfb0438abb06c 874 Pfam PF01966 HD domain 452 584 1.4E-12 T 12-10-2018 IPR006674 HD domain M634_13995 4ddb1863b60121da463cfb0438abb06c 874 Pfam PF08335 GlnD PII-uridylyltransferase 176 314 3.3E-35 T 12-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 M634_13995 4ddb1863b60121da463cfb0438abb06c 874 SUPERFAMILY SSF109604 418 585 2.29E-12 T 12-10-2018 M634_13995 4ddb1863b60121da463cfb0438abb06c 874 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 29 868 0.0 T 12-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 M634_13995 4ddb1863b60121da463cfb0438abb06c 874 Pfam PF01842 ACT domain 802 849 6.6E-8 T 12-10-2018 IPR002912 ACT domain M634_13995 4ddb1863b60121da463cfb0438abb06c 874 Gene3D G3DSA:1.10.3210.10 435 582 6.3E-8 T 12-10-2018 M634_13995 4ddb1863b60121da463cfb0438abb06c 874 Pfam PF01909 Nucleotidyltransferase domain 57 111 1.4E-7 T 12-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 M634_13995 4ddb1863b60121da463cfb0438abb06c 874 SUPERFAMILY SSF81301 35 171 8.45E-20 T 12-10-2018 M634_13995 4ddb1863b60121da463cfb0438abb06c 874 SMART SM00471 447 594 2.1E-10 T 12-10-2018 IPR003607 HD/PDEase domain M634_24290 ebf9222c14e66c5dc48b1fd44da292d8 634 Pfam PF00082 Subtilase family 187 484 6.0E-40 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 M634_24290 ebf9222c14e66c5dc48b1fd44da292d8 634 Gene3D G3DSA:3.40.50.200 132 512 4.1E-75 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 M634_24290 ebf9222c14e66c5dc48b1fd44da292d8 634 SUPERFAMILY SSF52743 170 508 9.43E-65 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 M634_24290 ebf9222c14e66c5dc48b1fd44da292d8 634 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 431 441 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site M634_24290 ebf9222c14e66c5dc48b1fd44da292d8 634 PRINTS PR00723 Subtilisin serine protease family (S8) signature 234 247 9.0E-14 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related M634_24290 ebf9222c14e66c5dc48b1fd44da292d8 634 PRINTS PR00723 Subtilisin serine protease family (S8) signature 186 205 9.0E-14 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related M634_24290 ebf9222c14e66c5dc48b1fd44da292d8 634 PRINTS PR00723 Subtilisin serine protease family (S8) signature 430 446 9.0E-14 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related M634_24290 ebf9222c14e66c5dc48b1fd44da292d8 634 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 238 248 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site M634_12430 a2c77030d9baaaa1054171768da35a5e 476 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 412 429 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 M634_12430 a2c77030d9baaaa1054171768da35a5e 476 Gene3D G3DSA:3.30.1360.60 394 475 6.3E-29 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 M634_12430 a2c77030d9baaaa1054171768da35a5e 476 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 375 458 4.2E-21 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 M634_12430 a2c77030d9baaaa1054171768da35a5e 476 Pfam PF00367 phosphotransferase system, EIIB 402 434 7.3E-12 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 M634_12430 a2c77030d9baaaa1054171768da35a5e 476 SUPERFAMILY SSF55604 399 472 9.68E-20 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 M634_12430 a2c77030d9baaaa1054171768da35a5e 476 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 473 1.8E-198 T 12-10-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0016021|GO:1904659 M634_12430 a2c77030d9baaaa1054171768da35a5e 476 Pfam PF02378 Phosphotransferase system, EIIC 13 318 2.6E-75 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 M634_07170 5fb8726f7adff71d43bbe6e825fa5210 445 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 6 445 54.446 T 12-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 M634_07170 5fb8726f7adff71d43bbe6e825fa5210 445 Gene3D G3DSA:1.10.10.10 29 123 4.2E-45 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_07170 5fb8726f7adff71d43bbe6e825fa5210 445 Pfam PF17192 MukF middle domain 126 286 3.7E-78 T 12-10-2018 IPR033440 Chromosome partition protein MukF, middle domain M634_07170 5fb8726f7adff71d43bbe6e825fa5210 445 SUPERFAMILY SSF140570 124 286 2.35E-76 T 12-10-2018 IPR036141 MukF, middle domain superfamily M634_07170 5fb8726f7adff71d43bbe6e825fa5210 445 Gene3D G3DSA:1.20.58.590 124 316 2.6E-80 T 12-10-2018 IPR036141 MukF, middle domain superfamily M634_07170 5fb8726f7adff71d43bbe6e825fa5210 445 Pfam PF03882 MukF winged-helix domain 10 122 3.0E-53 T 12-10-2018 IPR033439 Chromosome partition protein MukF, winged-helix domain M634_07170 5fb8726f7adff71d43bbe6e825fa5210 445 SUPERFAMILY SSF46785 13 123 2.24E-44 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_07170 5fb8726f7adff71d43bbe6e825fa5210 445 Pfam PF17193 MukF C-terminal domain 288 445 1.1E-77 T 12-10-2018 IPR033441 Chromosome partition protein MukF, C-terminal domain M634_07170 5fb8726f7adff71d43bbe6e825fa5210 445 PIRSF PIRSF018282 1 445 9.9E-248 T 12-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 M634_07170 5fb8726f7adff71d43bbe6e825fa5210 445 Gene3D G3DSA:1.10.225.40 358 445 1.4E-37 T 12-10-2018 IPR038198 MukF, C-terminal domain superfamily M634_19375 9b17bf30ba99ec06d40104c3e913c4b2 234 Gene3D G3DSA:3.40.1410.10 70 228 2.9E-34 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily M634_19375 9b17bf30ba99ec06d40104c3e913c4b2 234 Gene3D G3DSA:1.10.10.10 2 69 5.6E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_19375 9b17bf30ba99ec06d40104c3e913c4b2 234 Pfam PF07702 UTRA domain 86 224 6.4E-36 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 M634_19375 9b17bf30ba99ec06d40104c3e913c4b2 234 SUPERFAMILY SSF46785 3 69 1.18E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_19375 9b17bf30ba99ec06d40104c3e913c4b2 234 SUPERFAMILY SSF64288 53 229 3.93E-40 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily M634_19375 9b17bf30ba99ec06d40104c3e913c4b2 234 SMART SM00345 6 65 4.1E-16 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_19375 9b17bf30ba99ec06d40104c3e913c4b2 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 65 4.7E-18 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_19375 9b17bf30ba99ec06d40104c3e913c4b2 234 SMART SM00866 86 225 2.3E-31 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 M634_19375 9b17bf30ba99ec06d40104c3e913c4b2 234 TIGRFAM TIGR03337 phnR: phosphonate utilization transcriptional regulator PhnR 2 230 3.8E-120 T 12-10-2018 IPR017722 Phosphonate utilization transcriptional regulator PhnR M634_19375 9b17bf30ba99ec06d40104c3e913c4b2 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 25 39 3.0E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_19375 9b17bf30ba99ec06d40104c3e913c4b2 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 55 3.0E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_22660 3b90a1374e8219d2980dcc68961d833a 351 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 60 347 4.4E-59 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 M634_22660 3b90a1374e8219d2980dcc68961d833a 351 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 70 275 1.8E-20 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M634_22660 3b90a1374e8219d2980dcc68961d833a 351 Gene3D G3DSA:1.10.287.470 106 177 1.0E-57 T 12-10-2018 M634_22660 3b90a1374e8219d2980dcc68961d833a 351 SUPERFAMILY SSF111369 61 289 8.5E-28 T 12-10-2018 M634_22660 3b90a1374e8219d2980dcc68961d833a 351 Gene3D G3DSA:2.40.30.170 60 290 1.0E-57 T 12-10-2018 M634_22660 3b90a1374e8219d2980dcc68961d833a 351 Gene3D G3DSA:2.40.50.100 72 212 1.0E-57 T 12-10-2018 M634_22660 3b90a1374e8219d2980dcc68961d833a 351 Gene3D G3DSA:2.40.420.20 291 344 1.0E-57 T 12-10-2018 M634_07910 7b01a7aa5a9ac56e183a9f2b6fb2bb3f 327 SUPERFAMILY SSF52821 45 182 4.85E-22 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M634_07910 7b01a7aa5a9ac56e183a9f2b6fb2bb3f 327 Gene3D G3DSA:3.40.250.10 34 189 4.6E-24 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M634_07910 7b01a7aa5a9ac56e183a9f2b6fb2bb3f 327 Gene3D G3DSA:3.40.250.10 193 321 8.7E-31 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M634_07910 7b01a7aa5a9ac56e183a9f2b6fb2bb3f 327 Pfam PF00581 Rhodanese-like domain 201 309 9.1E-13 T 12-10-2018 IPR001763 Rhodanese-like domain M634_07910 7b01a7aa5a9ac56e183a9f2b6fb2bb3f 327 Pfam PF00581 Rhodanese-like domain 81 164 2.2E-8 T 12-10-2018 IPR001763 Rhodanese-like domain M634_07910 7b01a7aa5a9ac56e183a9f2b6fb2bb3f 327 ProSitePatterns PS00683 Rhodanese C-terminal signature. 298 308 - T 12-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 M634_07910 7b01a7aa5a9ac56e183a9f2b6fb2bb3f 327 SUPERFAMILY SSF52821 194 314 1.96E-28 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M634_07910 7b01a7aa5a9ac56e183a9f2b6fb2bb3f 327 SMART SM00450 15 169 0.0021 T 12-10-2018 IPR001763 Rhodanese-like domain M634_07910 7b01a7aa5a9ac56e183a9f2b6fb2bb3f 327 SMART SM00450 195 314 1.9E-17 T 12-10-2018 IPR001763 Rhodanese-like domain M634_18230 d8e74ae38cc644b03a6a624fc31efe56 353 Pfam PF08719 Domain of unknown function (DUF1768) 7 145 7.6E-36 T 12-10-2018 IPR012816 NADAR M634_18230 d8e74ae38cc644b03a6a624fc31efe56 353 SUPERFAMILY SSF143990 4 145 3.01E-51 T 12-10-2018 IPR037238 YbiA-like superfamily M634_18230 d8e74ae38cc644b03a6a624fc31efe56 353 SUPERFAMILY SSF142695 152 322 3.01E-65 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 M634_18230 d8e74ae38cc644b03a6a624fc31efe56 353 Gene3D G3DSA:3.40.50.10990 152 323 8.0E-73 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 M634_18230 d8e74ae38cc644b03a6a624fc31efe56 353 Gene3D G3DSA:1.10.357.40 2 151 2.5E-56 T 12-10-2018 IPR037238 YbiA-like superfamily M634_18230 d8e74ae38cc644b03a6a624fc31efe56 353 PIRSF PIRSF001259 1 353 5.4E-116 T 12-10-2018 M634_18230 d8e74ae38cc644b03a6a624fc31efe56 353 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 157 343 4.4E-82 T 12-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 M634_18230 d8e74ae38cc644b03a6a624fc31efe56 353 TIGRFAM TIGR02464 ribofla_fusion: conserved hypothetical protein 5 144 1.1E-34 T 12-10-2018 IPR012816 NADAR M634_18230 d8e74ae38cc644b03a6a624fc31efe56 353 Pfam PF00925 GTP cyclohydrolase II 158 320 9.5E-66 T 12-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 M634_18230 d8e74ae38cc644b03a6a624fc31efe56 353 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 151 346 44.313 T 12-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 M634_14050 ebd50c6a2ba35c471a24e1132a732ef0 231 Gene3D G3DSA:3.30.2310.10 140 227 2.8E-20 T 12-10-2018 M634_14050 ebd50c6a2ba35c471a24e1132a732ef0 231 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 2 146 5.2E-48 T 12-10-2018 IPR023370 YaeB-like, N-terminal domain M634_14050 ebd50c6a2ba35c471a24e1132a732ef0 231 SUPERFAMILY SSF118196 1 226 4.58E-79 T 12-10-2018 IPR036413 YaeB-like superfamily M634_14050 ebd50c6a2ba35c471a24e1132a732ef0 231 Gene3D G3DSA:2.40.30.70 1 139 1.2E-42 T 12-10-2018 IPR036414 YaeB, N-terminal domain superfamily M634_14050 ebd50c6a2ba35c471a24e1132a732ef0 231 Pfam PF01980 Uncharacterised protein family UPF0066 19 141 3.1E-39 T 12-10-2018 IPR023370 YaeB-like, N-terminal domain M634_14050 ebd50c6a2ba35c471a24e1132a732ef0 231 ProSitePatterns PS01318 TsaA-like domain signature. 85 96 - T 12-10-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site M634_17005 6656827c3078060c715660d4d36cbc71 397 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 12-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 M634_17005 6656827c3078060c715660d4d36cbc71 397 Gene3D G3DSA:3.90.1150.10 40 387 1.9E-134 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M634_17005 6656827c3078060c715660d4d36cbc71 397 Gene3D G3DSA:3.40.640.10 58 296 1.9E-134 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_17005 6656827c3078060c715660d4d36cbc71 397 SUPERFAMILY SSF53383 4 395 3.99E-121 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_17005 6656827c3078060c715660d4d36cbc71 397 Pfam PF00155 Aminotransferase class I and II 43 387 3.4E-75 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 M634_17005 6656827c3078060c715660d4d36cbc71 397 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 5 397 3.1E-207 T 12-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 M634_17005 6656827c3078060c715660d4d36cbc71 397 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 395 53.314 T 12-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 M634_19410 17ec79ebeee24987f7316a6e9666786d 325 PRINTS PR01021 OMPA domain signature 243 258 2.7E-6 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M634_19410 17ec79ebeee24987f7316a6e9666786d 325 PRINTS PR01021 OMPA domain signature 258 274 2.7E-6 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M634_19410 17ec79ebeee24987f7316a6e9666786d 325 Pfam PF00691 OmpA family 223 307 9.5E-19 T 12-10-2018 IPR006665 OmpA-like domain M634_19410 17ec79ebeee24987f7316a6e9666786d 325 SUPERFAMILY SSF103088 200 313 1.44E-30 T 12-10-2018 IPR036737 OmpA-like domain superfamily M634_19410 17ec79ebeee24987f7316a6e9666786d 325 Gene3D G3DSA:3.30.1330.60 200 314 1.6E-31 T 12-10-2018 IPR036737 OmpA-like domain superfamily M634_19410 17ec79ebeee24987f7316a6e9666786d 325 Gene3D G3DSA:2.40.160.20 13 199 2.3E-44 T 12-10-2018 M634_19410 17ec79ebeee24987f7316a6e9666786d 325 SUPERFAMILY SSF56925 23 181 3.14E-36 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel M634_19410 17ec79ebeee24987f7316a6e9666786d 325 Pfam PF01389 OmpA-like transmembrane domain 23 180 6.4E-23 T 12-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 M634_15920 6b3a7a95985b3c88d9b168f4d18e970f 175 PIRSF PIRSF016183 1 174 2.5E-72 T 12-10-2018 IPR006839 Ribosome-associated, YjgA M634_15920 6b3a7a95985b3c88d9b168f4d18e970f 175 Pfam PF04751 Protein of unknown function (DUF615) 18 168 3.1E-56 T 12-10-2018 IPR006839 Ribosome-associated, YjgA M634_15920 6b3a7a95985b3c88d9b168f4d18e970f 175 SUPERFAMILY SSF158710 28 170 1.31E-51 T 12-10-2018 IPR023153 PSPTO4464-like domain superfamily M634_15920 6b3a7a95985b3c88d9b168f4d18e970f 175 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 10 172 23.06 T 12-10-2018 IPR006839 Ribosome-associated, YjgA M634_15920 6b3a7a95985b3c88d9b168f4d18e970f 175 Gene3D G3DSA:1.10.60.30 28 102 2.8E-26 T 12-10-2018 M634_15920 6b3a7a95985b3c88d9b168f4d18e970f 175 Gene3D G3DSA:1.10.60.30 103 175 5.6E-24 T 12-10-2018 M634_00150 545800f74c06a3e6c753333f8667be40 361 Pfam PF01168 Alanine racemase, N-terminal domain 11 222 3.8E-70 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M634_00150 545800f74c06a3e6c753333f8667be40 361 Hamap MF_01201 Alanine racemase. 4 360 34.764 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M634_00150 545800f74c06a3e6c753333f8667be40 361 Gene3D G3DSA:3.20.20.10 13 220 2.2E-132 T 12-10-2018 IPR029066 PLP-binding barrel M634_00150 545800f74c06a3e6c753333f8667be40 361 PRINTS PR00992 Alanine racemase signature 342 355 9.2E-70 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M634_00150 545800f74c06a3e6c753333f8667be40 361 PRINTS PR00992 Alanine racemase signature 252 267 9.2E-70 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M634_00150 545800f74c06a3e6c753333f8667be40 361 PRINTS PR00992 Alanine racemase signature 29 45 9.2E-70 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M634_00150 545800f74c06a3e6c753333f8667be40 361 PRINTS PR00992 Alanine racemase signature 290 307 9.2E-70 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M634_00150 545800f74c06a3e6c753333f8667be40 361 PRINTS PR00992 Alanine racemase signature 195 222 9.2E-70 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M634_00150 545800f74c06a3e6c753333f8667be40 361 PRINTS PR00992 Alanine racemase signature 158 169 9.2E-70 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M634_00150 545800f74c06a3e6c753333f8667be40 361 PRINTS PR00992 Alanine racemase signature 123 135 9.2E-70 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M634_00150 545800f74c06a3e6c753333f8667be40 361 PRINTS PR00992 Alanine racemase signature 63 81 9.2E-70 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M634_00150 545800f74c06a3e6c753333f8667be40 361 PRINTS PR00992 Alanine racemase signature 269 284 9.2E-70 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M634_00150 545800f74c06a3e6c753333f8667be40 361 Gene3D G3DSA:2.40.37.10 11 355 2.2E-132 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 M634_00150 545800f74c06a3e6c753333f8667be40 361 Pfam PF00842 Alanine racemase, C-terminal domain 236 359 1.8E-42 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M634_00150 545800f74c06a3e6c753333f8667be40 361 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 34 44 - T 12-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M634_00150 545800f74c06a3e6c753333f8667be40 361 SMART SM01005 236 360 1.6E-67 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M634_00150 545800f74c06a3e6c753333f8667be40 361 SUPERFAMILY SSF50621 229 360 3.0E-47 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 M634_00150 545800f74c06a3e6c753333f8667be40 361 SUPERFAMILY SSF51419 11 237 1.57E-70 T 12-10-2018 IPR029066 PLP-binding barrel M634_00150 545800f74c06a3e6c753333f8667be40 361 TIGRFAM TIGR00492 alr: alanine racemase 7 359 8.6E-129 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M634_06675 7c70873f4b0f1bf5dabc649719f18ae6 480 Pfam PF13193 AMP-binding enzyme C-terminal domain 389 453 2.8E-5 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain M634_06675 7c70873f4b0f1bf5dabc649719f18ae6 480 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 40 468 1.9E-126 T 12-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 M634_06675 7c70873f4b0f1bf5dabc649719f18ae6 480 SUPERFAMILY SSF56801 17 478 1.44E-85 T 12-10-2018 M634_06675 7c70873f4b0f1bf5dabc649719f18ae6 480 Gene3D G3DSA:3.30.300.30 377 474 2.0E-15 T 12-10-2018 M634_06675 7c70873f4b0f1bf5dabc649719f18ae6 480 Pfam PF00501 AMP-binding enzyme 21 380 8.3E-51 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 M634_06675 7c70873f4b0f1bf5dabc649719f18ae6 480 Gene3D G3DSA:3.40.50.12780 17 376 3.2E-63 T 12-10-2018 M634_06675 7c70873f4b0f1bf5dabc649719f18ae6 480 ProSitePatterns PS00455 Putative AMP-binding domain signature. 163 174 - T 12-10-2018 IPR020845 AMP-binding, conserved site M634_12735 c38e24d11be9b3821baa7df3b646de4c 216 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 12-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 M634_12735 c38e24d11be9b3821baa7df3b646de4c 216 SMART SM00525 186 206 1.2E-5 T 12-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 M634_12735 c38e24d11be9b3821baa7df3b646de4c 216 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 12-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 M634_12735 c38e24d11be9b3821baa7df3b646de4c 216 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.5E-4 T 12-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 M634_12735 c38e24d11be9b3821baa7df3b646de4c 216 SUPERFAMILY SSF48150 2 205 7.85E-71 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 M634_12735 c38e24d11be9b3821baa7df3b646de4c 216 Pfam PF00633 Helix-hairpin-helix motif 100 127 5.5E-8 T 12-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 M634_12735 c38e24d11be9b3821baa7df3b646de4c 216 SMART SM00478 38 185 5.7E-56 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 M634_12735 c38e24d11be9b3821baa7df3b646de4c 216 Gene3D G3DSA:1.10.1670.10 11 203 9.0E-78 T 12-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 M634_12735 c38e24d11be9b3821baa7df3b646de4c 216 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 3.4E-19 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 M634_12735 c38e24d11be9b3821baa7df3b646de4c 216 Gene3D G3DSA:1.10.340.30 21 132 9.0E-78 T 12-10-2018 M634_12735 c38e24d11be9b3821baa7df3b646de4c 216 Hamap MF_00942 Endonuclease III [nth]. 1 209 38.026 T 12-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 M634_12735 c38e24d11be9b3821baa7df3b646de4c 216 TIGRFAM TIGR01083 nth: endonuclease III 4 194 2.3E-88 T 12-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 M634_12735 c38e24d11be9b3821baa7df3b646de4c 216 PIRSF PIRSF001435 1 212 6.6E-50 T 12-10-2018 M634_01290 2eea3bbe6e9e44235e83e2c2f0fecc5d 286 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 253 279 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M634_01290 2eea3bbe6e9e44235e83e2c2f0fecc5d 286 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 285 53.068 T 12-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 M634_01290 2eea3bbe6e9e44235e83e2c2f0fecc5d 286 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M634_01290 2eea3bbe6e9e44235e83e2c2f0fecc5d 286 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 15 283 1.3E-125 T 12-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 M634_01290 2eea3bbe6e9e44235e83e2c2f0fecc5d 286 SUPERFAMILY SSF88659 199 282 1.59E-18 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like M634_01290 2eea3bbe6e9e44235e83e2c2f0fecc5d 286 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 281 3.5E-33 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 M634_01290 2eea3bbe6e9e44235e83e2c2f0fecc5d 286 PRINTS PR00046 Major sigma-70 factor signature 234 246 1.1E-18 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M634_01290 2eea3bbe6e9e44235e83e2c2f0fecc5d 286 PRINTS PR00046 Major sigma-70 factor signature 253 268 1.1E-18 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M634_01290 2eea3bbe6e9e44235e83e2c2f0fecc5d 286 PRINTS PR00046 Major sigma-70 factor signature 77 90 1.1E-18 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M634_01290 2eea3bbe6e9e44235e83e2c2f0fecc5d 286 PRINTS PR00046 Major sigma-70 factor signature 268 279 1.1E-18 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M634_01290 2eea3bbe6e9e44235e83e2c2f0fecc5d 286 Pfam PF00140 Sigma-70 factor, region 1.2 14 40 8.0E-9 T 12-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 M634_01290 2eea3bbe6e9e44235e83e2c2f0fecc5d 286 Pfam PF04545 Sigma-70, region 4 230 280 7.7E-16 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 M634_01290 2eea3bbe6e9e44235e83e2c2f0fecc5d 286 Gene3D G3DSA:1.20.140.160 131 284 1.8E-14 T 12-10-2018 M634_01290 2eea3bbe6e9e44235e83e2c2f0fecc5d 286 Pfam PF04542 Sigma-70 region 2 53 122 6.4E-17 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 M634_01290 2eea3bbe6e9e44235e83e2c2f0fecc5d 286 Gene3D G3DSA:1.20.120.1810 11 122 6.8E-27 T 12-10-2018 M634_01290 2eea3bbe6e9e44235e83e2c2f0fecc5d 286 SUPERFAMILY SSF88946 11 122 5.97E-40 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 M634_15545 553105b19444d2e74f2d1b309f342971 358 Gene3D G3DSA:3.90.79.10 223 356 1.4E-17 T 12-10-2018 M634_15545 553105b19444d2e74f2d1b309f342971 358 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 4 270 4.6E-125 T 12-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 M634_15545 553105b19444d2e74f2d1b309f342971 358 SUPERFAMILY SSF55811 218 353 4.35E-27 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 M634_15545 553105b19444d2e74f2d1b309f342971 358 SUPERFAMILY SSF48150 3 223 1.57E-74 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 M634_15545 553105b19444d2e74f2d1b309f342971 358 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 190 206 5.4E-6 T 12-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 M634_15545 553105b19444d2e74f2d1b309f342971 358 SMART SM00525 189 209 2.8E-5 T 12-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 M634_15545 553105b19444d2e74f2d1b309f342971 358 Gene3D G3DSA:1.10.340.30 19 130 1.2E-87 T 12-10-2018 M634_15545 553105b19444d2e74f2d1b309f342971 358 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 166 9.7E-22 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 M634_15545 553105b19444d2e74f2d1b309f342971 358 Pfam PF14815 NUDIX domain 242 352 6.6E-22 T 12-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 M634_15545 553105b19444d2e74f2d1b309f342971 358 SMART SM00478 37 188 2.0E-44 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 M634_15545 553105b19444d2e74f2d1b309f342971 358 Gene3D G3DSA:1.10.1670.10 7 209 1.2E-87 T 12-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 M634_15545 553105b19444d2e74f2d1b309f342971 358 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 190 206 - T 12-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 M634_15545 553105b19444d2e74f2d1b309f342971 358 Pfam PF00633 Helix-hairpin-helix motif 98 125 1.4E-5 T 12-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 M634_22430 287d5a5ec328fb0d411424911dd8096b 402 Pfam PF02486 Replication initiation factor 203 380 2.0E-30 T 12-10-2018 IPR003491 Replication initiation factor GO:0003677|GO:0003916|GO:0006270 M634_06885 e8b08201a05d0edc03b0202616958b93 1153 Gene3D G3DSA:3.40.50.11140 355 453 2.4E-31 T 12-10-2018 M634_06885 e8b08201a05d0edc03b0202616958b93 1153 Pfam PF00270 DEAD/DEAH box helicase 605 765 1.1E-20 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 M634_06885 e8b08201a05d0edc03b0202616958b93 1153 SUPERFAMILY SSF143517 995 1147 1.57E-43 T 12-10-2018 IPR037235 TRCF-like, C-terminal domain M634_06885 e8b08201a05d0edc03b0202616958b93 1153 SUPERFAMILY SSF52540 11 342 3.19E-102 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_06885 e8b08201a05d0edc03b0202616958b93 1153 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 30 1108 28.072 T 12-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 M634_06885 e8b08201a05d0edc03b0202616958b93 1153 SMART SM00490 826 910 5.4E-19 T 12-10-2018 IPR001650 Helicase, C-terminal M634_06885 e8b08201a05d0edc03b0202616958b93 1153 Gene3D G3DSA:3.40.50.300 542 781 2.3E-237 T 12-10-2018 M634_06885 e8b08201a05d0edc03b0202616958b93 1153 SUPERFAMILY SSF52540 523 783 2.74E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_06885 e8b08201a05d0edc03b0202616958b93 1153 SMART SM00487 600 790 1.9E-33 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M634_06885 e8b08201a05d0edc03b0202616958b93 1153 Pfam PF02559 CarD-like/TRCF domain 480 575 2.1E-26 T 12-10-2018 IPR003711 CarD-like/TRCF domain M634_06885 e8b08201a05d0edc03b0202616958b93 1153 Gene3D G3DSA:3.40.50.11180 26 334 1.4E-121 T 12-10-2018 M634_06885 e8b08201a05d0edc03b0202616958b93 1153 SUPERFAMILY SSF141259 470 548 5.23E-25 T 12-10-2018 IPR036101 CarD-like/TRCF domain superfamily M634_06885 e8b08201a05d0edc03b0202616958b93 1153 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 148 1081 0.0 T 12-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 M634_06885 e8b08201a05d0edc03b0202616958b93 1153 Pfam PF00271 Helicase conserved C-terminal domain 807 909 9.5E-17 T 12-10-2018 IPR001650 Helicase, C-terminal M634_06885 e8b08201a05d0edc03b0202616958b93 1153 SMART SM00982 1008 1108 8.0E-47 T 12-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 M634_06885 e8b08201a05d0edc03b0202616958b93 1153 SMART SM01058 479 576 5.0E-53 T 12-10-2018 IPR003711 CarD-like/TRCF domain M634_06885 e8b08201a05d0edc03b0202616958b93 1153 Gene3D G3DSA:3.40.50.300 478 990 2.3E-237 T 12-10-2018 M634_06885 e8b08201a05d0edc03b0202616958b93 1153 Gene3D G3DSA:2.30.30.840 483 541 2.3E-237 T 12-10-2018 M634_06885 e8b08201a05d0edc03b0202616958b93 1153 Gene3D G3DSA:3.30.2060.10 130 215 1.4E-121 T 12-10-2018 M634_06885 e8b08201a05d0edc03b0202616958b93 1153 Gene3D G3DSA:3.90.1150.50 1004 1150 2.4E-45 T 12-10-2018 IPR037235 TRCF-like, C-terminal domain M634_06885 e8b08201a05d0edc03b0202616958b93 1153 Pfam PF03461 TRCF domain 1009 1101 1.4E-27 T 12-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 M634_06885 e8b08201a05d0edc03b0202616958b93 1153 SUPERFAMILY SSF52540 351 466 2.02E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_06885 e8b08201a05d0edc03b0202616958b93 1153 SUPERFAMILY SSF52540 782 990 5.97E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_06995 d49b243ab24c400d930cc54376644cb2 258 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 9 251 7.3E-81 T 12-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 M634_06995 d49b243ab24c400d930cc54376644cb2 258 Gene3D G3DSA:3.40.190.10 114 211 8.5E-72 T 12-10-2018 M634_06995 d49b243ab24c400d930cc54376644cb2 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 252 9.9E-62 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M634_06995 d49b243ab24c400d930cc54376644cb2 258 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 51 64 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site M634_06995 d49b243ab24c400d930cc54376644cb2 258 SMART SM00079 28 253 3.8E-4 T 12-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 M634_06995 d49b243ab24c400d930cc54376644cb2 258 SMART SM00062 28 254 8.4E-70 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M634_06995 d49b243ab24c400d930cc54376644cb2 258 Gene3D G3DSA:3.40.190.10 30 250 8.5E-72 T 12-10-2018 M634_06995 d49b243ab24c400d930cc54376644cb2 258 SUPERFAMILY SSF53850 3 255 2.35E-69 T 12-10-2018 M634_23865 387ce1989fdad0fb5833f62a37f75555 564 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 139 148 - T 12-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_23865 387ce1989fdad0fb5833f62a37f75555 564 SUPERFAMILY SSF55957 432 554 1.24E-14 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_23865 387ce1989fdad0fb5833f62a37f75555 564 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 293 308 5.1E-8 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_23865 387ce1989fdad0fb5833f62a37f75555 564 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 226 245 5.1E-8 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_23865 387ce1989fdad0fb5833f62a37f75555 564 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 138 152 5.1E-8 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_23865 387ce1989fdad0fb5833f62a37f75555 564 Gene3D G3DSA:3.40.120.10 203 321 3.9E-21 T 12-10-2018 M634_23865 387ce1989fdad0fb5833f62a37f75555 564 Gene3D G3DSA:3.30.310.50 447 551 5.2E-8 T 12-10-2018 M634_23865 387ce1989fdad0fb5833f62a37f75555 564 SUPERFAMILY SSF53738 28 230 8.24E-45 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_23865 387ce1989fdad0fb5833f62a37f75555 564 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 321 437 4.7E-17 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_23865 387ce1989fdad0fb5833f62a37f75555 564 Gene3D G3DSA:3.40.120.10 32 184 2.0E-46 T 12-10-2018 M634_23865 387ce1989fdad0fb5833f62a37f75555 564 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 209 309 2.7E-24 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_23865 387ce1989fdad0fb5833f62a37f75555 564 SUPERFAMILY SSF53738 301 443 1.1E-29 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_23865 387ce1989fdad0fb5833f62a37f75555 564 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 495 533 1.7E-8 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_23865 387ce1989fdad0fb5833f62a37f75555 564 SUPERFAMILY SSF53738 203 311 8.24E-22 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_23865 387ce1989fdad0fb5833f62a37f75555 564 Gene3D G3DSA:3.40.120.10 322 441 1.8E-28 T 12-10-2018 M634_23865 387ce1989fdad0fb5833f62a37f75555 564 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 41 180 1.3E-41 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_05370 97ef3e0d2ed32278d54a67403e69bf8e 315 Gene3D G3DSA:3.30.1330.60 154 302 9.7E-53 T 12-10-2018 IPR036737 OmpA-like domain superfamily M634_05370 97ef3e0d2ed32278d54a67403e69bf8e 315 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 13 58 2.3E-17 T 12-10-2018 IPR025713 Motility protein B, N-terminal domain M634_05370 97ef3e0d2ed32278d54a67403e69bf8e 315 SUPERFAMILY SSF103088 183 300 6.02E-30 T 12-10-2018 IPR036737 OmpA-like domain superfamily M634_05370 97ef3e0d2ed32278d54a67403e69bf8e 315 Pfam PF00691 OmpA family 196 294 1.8E-17 T 12-10-2018 IPR006665 OmpA-like domain M634_13765 12a44dac49b3b54c7ffa24125afeed2c 180 SUPERFAMILY SSF55021 1 82 2.14E-18 T 12-10-2018 M634_13765 12a44dac49b3b54c7ffa24125afeed2c 180 Gene3D G3DSA:3.30.70.260 87 180 1.1E-40 T 12-10-2018 M634_13765 12a44dac49b3b54c7ffa24125afeed2c 180 SUPERFAMILY SSF55021 90 176 1.07E-21 T 12-10-2018 M634_13765 12a44dac49b3b54c7ffa24125afeed2c 180 PIRSF PIRSF028103 1 178 2.9E-70 T 12-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 M634_13765 12a44dac49b3b54c7ffa24125afeed2c 180 Pfam PF13740 ACT domain 3 78 3.0E-23 T 12-10-2018 M634_13765 12a44dac49b3b54c7ffa24125afeed2c 180 Gene3D G3DSA:3.30.70.260 1 85 7.0E-25 T 12-10-2018 M634_07635 4bc19316a9ad11d33ecaffff70f0fc7d 257 Gene3D G3DSA:3.20.20.70 1 257 2.5E-95 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_07635 4bc19316a9ad11d33ecaffff70f0fc7d 257 Pfam PF00977 Histidine biosynthesis protein 5 239 3.0E-79 T 12-10-2018 IPR006062 Histidine biosynthesis GO:0000105 M634_07635 4bc19316a9ad11d33ecaffff70f0fc7d 257 SUPERFAMILY SSF51366 1 256 1.88E-74 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 M634_07635 4bc19316a9ad11d33ecaffff70f0fc7d 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 44.931 T 12-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 M634_07635 4bc19316a9ad11d33ecaffff70f0fc7d 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 1.4E-114 T 12-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 M634_06235 84bdf563922c8bab6954ca067d761b3c 588 PIRSF PIRSF000171 1 580 2.2E-49 T 12-10-2018 M634_06235 84bdf563922c8bab6954ca067d761b3c 588 Gene3D G3DSA:3.50.50.60 9 416 7.1E-170 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_06235 84bdf563922c8bab6954ca067d761b3c 588 Gene3D G3DSA:1.20.58.100 431 547 6.3E-38 T 12-10-2018 M634_06235 84bdf563922c8bab6954ca067d761b3c 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 12-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M634_06235 84bdf563922c8bab6954ca067d761b3c 588 SUPERFAMILY SSF51905 5 428 1.67E-71 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_06235 84bdf563922c8bab6954ca067d761b3c 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 2.4E-36 T 12-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M634_06235 84bdf563922c8bab6954ca067d761b3c 588 SUPERFAMILY SSF46977 452 588 2.75E-46 T 12-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M634_06235 84bdf563922c8bab6954ca067d761b3c 588 SUPERFAMILY SSF56425 236 356 2.69E-42 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 M634_06235 84bdf563922c8bab6954ca067d761b3c 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 4.6E-240 T 12-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M634_06235 84bdf563922c8bab6954ca067d761b3c 588 Gene3D G3DSA:3.90.700.10 246 350 7.1E-170 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 M634_06235 84bdf563922c8bab6954ca067d761b3c 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 2.4E-274 T 12-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 M634_06235 84bdf563922c8bab6954ca067d761b3c 588 Pfam PF00890 FAD binding domain 9 405 3.4E-118 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 M634_06235 84bdf563922c8bab6954ca067d761b3c 588 Gene3D G3DSA:4.10.80.40 548 588 1.2E-23 T 12-10-2018 M634_19830 dba31c0535c585e63566af2b6c02930e 156 SUPERFAMILY SSF88697 2 154 5.22E-54 T 12-10-2018 IPR015947 PUA-like superfamily M634_19830 dba31c0535c585e63566af2b6c02930e 156 Pfam PF04266 ASCH domain 41 153 7.9E-22 T 12-10-2018 IPR007374 ASCH domain M634_19830 dba31c0535c585e63566af2b6c02930e 156 SMART SM01022 30 153 1.9E-34 T 12-10-2018 IPR007374 ASCH domain M634_19830 dba31c0535c585e63566af2b6c02930e 156 PIRSF PIRSF021320 1 156 1.3E-50 T 12-10-2018 IPR009326 Protein of unknown function DUF984 M634_19830 dba31c0535c585e63566af2b6c02930e 156 Gene3D G3DSA:3.10.400.10 1 153 1.6E-58 T 12-10-2018 M634_00455 f029495f09a92b89d40325a8965a38e9 403 PIRSF PIRSF000521 27 155 1.2E-6 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M634_00455 f029495f09a92b89d40325a8965a38e9 403 PIRSF PIRSF000521 172 402 9.9E-37 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M634_00455 f029495f09a92b89d40325a8965a38e9 403 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 16 399 6.6E-148 T 12-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 M634_00455 f029495f09a92b89d40325a8965a38e9 403 Gene3D G3DSA:3.90.1150.10 25 392 2.2E-150 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M634_00455 f029495f09a92b89d40325a8965a38e9 403 Gene3D G3DSA:3.40.640.10 59 304 2.2E-150 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_00455 f029495f09a92b89d40325a8965a38e9 403 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 403 8.2E-207 T 12-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 M634_00455 f029495f09a92b89d40325a8965a38e9 403 SUPERFAMILY SSF53383 16 399 8.2E-130 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_00455 f029495f09a92b89d40325a8965a38e9 403 Pfam PF00202 Aminotransferase class-III 22 399 7.1E-127 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M634_00455 f029495f09a92b89d40325a8965a38e9 403 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 15 402 70.22 T 12-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 M634_00455 f029495f09a92b89d40325a8965a38e9 403 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M634_14260 2545e5e1056e1352d8d2811e7a20169d 1227 Gene3D G3DSA:3.40.50.300 25 452 1.8E-159 T 12-10-2018 M634_14260 2545e5e1056e1352d8d2811e7a20169d 1227 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 23 1210 22.883 T 12-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 M634_14260 2545e5e1056e1352d8d2811e7a20169d 1227 Pfam PF12705 PD-(D/E)XK nuclease superfamily 985 1210 3.7E-7 T 12-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type M634_14260 2545e5e1056e1352d8d2811e7a20169d 1227 Gene3D G3DSA:3.90.320.10 918 1216 4.1E-102 T 12-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal M634_14260 2545e5e1056e1352d8d2811e7a20169d 1227 Pfam PF13361 UvrD-like helicase C-terminal domain 459 842 2.1E-17 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 M634_14260 2545e5e1056e1352d8d2811e7a20169d 1227 SUPERFAMILY SSF52980 928 1211 4.45E-87 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 M634_14260 2545e5e1056e1352d8d2811e7a20169d 1227 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 25 1209 0.0 T 12-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 M634_14260 2545e5e1056e1352d8d2811e7a20169d 1227 Gene3D G3DSA:1.10.3170.10 173 365 1.8E-159 T 12-10-2018 M634_14260 2545e5e1056e1352d8d2811e7a20169d 1227 SUPERFAMILY SSF52540 31 867 4.49E-110 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_14260 2545e5e1056e1352d8d2811e7a20169d 1227 Gene3D G3DSA:3.40.50.300 461 873 8.0E-155 T 12-10-2018 M634_14260 2545e5e1056e1352d8d2811e7a20169d 1227 Gene3D G3DSA:1.10.486.10 602 756 8.0E-155 T 12-10-2018 M634_14260 2545e5e1056e1352d8d2811e7a20169d 1227 Pfam PF00580 UvrD/REP helicase N-terminal domain 27 452 3.4E-59 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 M634_22165 4e0b7ffc9ccf82f52c78af23cad482bd 476 SMART SM00283 213 474 4.0E-50 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_22165 4e0b7ffc9ccf82f52c78af23cad482bd 476 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 234 263 4.1E-25 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M634_22165 4e0b7ffc9ccf82f52c78af23cad482bd 476 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 311 338 4.1E-25 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M634_22165 4e0b7ffc9ccf82f52c78af23cad482bd 476 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 340 369 4.1E-25 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M634_22165 4e0b7ffc9ccf82f52c78af23cad482bd 476 Gene3D G3DSA:1.10.287.950 149 476 2.6E-66 T 12-10-2018 M634_22165 4e0b7ffc9ccf82f52c78af23cad482bd 476 SUPERFAMILY SSF58104 165 474 2.09E-66 T 12-10-2018 M634_22165 4e0b7ffc9ccf82f52c78af23cad482bd 476 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 287 439 8.9E-39 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_13270 c3ab5ade836e9f1943b601f975f80ad1 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 124 5.6E-47 T 12-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 M634_13270 c3ab5ade836e9f1943b601f975f80ad1 126 Gene3D G3DSA:3.30.1330.40 1 126 3.8E-50 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 M634_13270 c3ab5ade836e9f1943b601f975f80ad1 126 Pfam PF01042 Endoribonuclease L-PSP 8 124 3.7E-38 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 M634_13270 c3ab5ade836e9f1943b601f975f80ad1 126 SUPERFAMILY SSF55298 1 125 3.93E-42 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 M634_02685 e18eabce960cf9dcbb046f0e632f266e 201 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 6 169 1.0E-12 T 12-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 M634_02685 e18eabce960cf9dcbb046f0e632f266e 201 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 29 5.6E-7 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M634_02685 e18eabce960cf9dcbb046f0e632f266e 201 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 30 3.8E-6 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M634_02685 e18eabce960cf9dcbb046f0e632f266e 201 Gene3D G3DSA:3.55.40.10 111 195 8.1E-22 T 12-10-2018 M634_02685 e18eabce960cf9dcbb046f0e632f266e 201 Gene3D G3DSA:3.55.40.10 39 110 9.9E-20 T 12-10-2018 M634_02685 e18eabce960cf9dcbb046f0e632f266e 201 SUPERFAMILY SSF54523 10 101 5.96E-10 T 12-10-2018 M634_02685 e18eabce960cf9dcbb046f0e632f266e 201 PRINTS PR00885 Bacterial general secretion pathway protein H signature 5 19 7.2E-21 T 12-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 M634_02685 e18eabce960cf9dcbb046f0e632f266e 201 PRINTS PR00885 Bacterial general secretion pathway protein H signature 20 34 7.2E-21 T 12-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 M634_02685 e18eabce960cf9dcbb046f0e632f266e 201 PRINTS PR00885 Bacterial general secretion pathway protein H signature 145 160 7.2E-21 T 12-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 M634_02685 e18eabce960cf9dcbb046f0e632f266e 201 Pfam PF12019 Type II transport protein GspH 45 182 3.0E-8 T 12-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 M634_00300 eea2d04104b91edb8054b07e8a6b170a 802 Gene3D G3DSA:3.40.50.720 451 798 2.8E-102 T 12-10-2018 M634_00300 eea2d04104b91edb8054b07e8a6b170a 802 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 646 668 - T 12-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 M634_00300 eea2d04104b91edb8054b07e8a6b170a 802 Gene3D G3DSA:3.30.360.10 611 781 2.8E-102 T 12-10-2018 M634_00300 eea2d04104b91edb8054b07e8a6b170a 802 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 12-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 M634_00300 eea2d04104b91edb8054b07e8a6b170a 802 Pfam PF00742 Homoserine dehydrogenase 600 795 4.1E-43 T 12-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 M634_00300 eea2d04104b91edb8054b07e8a6b170a 802 SUPERFAMILY SSF53633 5 291 1.31E-58 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily M634_00300 eea2d04104b91edb8054b07e8a6b170a 802 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 457 592 4.2E-14 T 12-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 M634_00300 eea2d04104b91edb8054b07e8a6b170a 802 PIRSF PIRSF000727 5 802 2.4E-287 T 12-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 M634_00300 eea2d04104b91edb8054b07e8a6b170a 802 Gene3D G3DSA:1.20.120.1320 44 137 2.5E-74 T 12-10-2018 M634_00300 eea2d04104b91edb8054b07e8a6b170a 802 Gene3D G3DSA:3.30.2130.10 299 449 7.4E-6 T 12-10-2018 M634_00300 eea2d04104b91edb8054b07e8a6b170a 802 Pfam PF00696 Amino acid kinase family 5 274 2.4E-44 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 M634_00300 eea2d04104b91edb8054b07e8a6b170a 802 SUPERFAMILY SSF55347 600 783 7.19E-45 T 12-10-2018 M634_00300 eea2d04104b91edb8054b07e8a6b170a 802 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 8 445 1.3E-66 T 12-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 M634_00300 eea2d04104b91edb8054b07e8a6b170a 802 Gene3D G3DSA:3.40.1160.10 8 290 2.5E-74 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily M634_00300 eea2d04104b91edb8054b07e8a6b170a 802 SUPERFAMILY SSF51735 448 622 7.16E-34 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_17865 fdd9537107d8289a9658728aea0bbb34 140 SUPERFAMILY SSF82784 1 135 1.83E-40 T 12-10-2018 IPR036102 OsmC/Ohr superfamily M634_17865 fdd9537107d8289a9658728aea0bbb34 140 Gene3D G3DSA:2.20.25.10 1 43 8.9E-21 T 12-10-2018 M634_17865 fdd9537107d8289a9658728aea0bbb34 140 Pfam PF02566 OsmC-like protein 38 133 8.9E-17 T 12-10-2018 IPR003718 OsmC/Ohr family M634_17865 fdd9537107d8289a9658728aea0bbb34 140 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 4 135 1.9E-51 T 12-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 M634_17865 fdd9537107d8289a9658728aea0bbb34 140 Gene3D G3DSA:3.30.300.20 44 140 2.1E-31 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta M634_14725 d429485c68364e66896297f3d12a5064 473 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 52 435 3.2E-103 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M634_14725 d429485c68364e66896297f3d12a5064 473 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 30 449 1.5E-101 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M634_14725 d429485c68364e66896297f3d12a5064 473 SUPERFAMILY SSF56601 52 456 1.5E-85 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like M634_14725 d429485c68364e66896297f3d12a5064 473 Gene3D G3DSA:3.50.80.20 81 173 1.4E-11 T 12-10-2018 M634_14725 d429485c68364e66896297f3d12a5064 473 Gene3D G3DSA:3.40.710.10 244 466 1.6E-54 T 12-10-2018 M634_14725 d429485c68364e66896297f3d12a5064 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 412 425 8.9E-30 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M634_14725 d429485c68364e66896297f3d12a5064 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 333 347 8.9E-30 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M634_14725 d429485c68364e66896297f3d12a5064 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 56 75 8.9E-30 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M634_14725 d429485c68364e66896297f3d12a5064 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 274 296 8.9E-30 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M634_14725 d429485c68364e66896297f3d12a5064 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 348 362 8.9E-30 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M634_01250 dbf53be4ff41c399031cb38e1c4ab217 286 SUPERFAMILY SSF53335 35 268 4.98E-36 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_01250 dbf53be4ff41c399031cb38e1c4ab217 286 PIRSF PIRSF028177 19 286 5.4E-71 T 12-10-2018 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 M634_01250 dbf53be4ff41c399031cb38e1c4ab217 286 Pfam PF04072 Leucine carboxyl methyltransferase 86 224 2.7E-8 T 12-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 M634_01250 dbf53be4ff41c399031cb38e1c4ab217 286 Gene3D G3DSA:3.40.50.150 23 269 4.6E-21 T 12-10-2018 M634_16755 bf2fa76abcf419c40dea09d01c1fe68f 710 SUPERFAMILY SSF55781 341 513 1.05E-5 T 12-10-2018 M634_16755 bf2fa76abcf419c40dea09d01c1fe68f 710 SMART SM00267 521 698 9.1E-44 T 12-10-2018 IPR000160 GGDEF domain M634_16755 bf2fa76abcf419c40dea09d01c1fe68f 710 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 528 696 9.3E-38 T 12-10-2018 IPR000160 GGDEF domain M634_16755 bf2fa76abcf419c40dea09d01c1fe68f 710 Gene3D G3DSA:3.30.450.40 332 517 7.7E-6 T 12-10-2018 IPR029016 GAF-like domain superfamily M634_16755 bf2fa76abcf419c40dea09d01c1fe68f 710 Pfam PF00990 Diguanylate cyclase, GGDEF domain 533 693 1.7E-36 T 12-10-2018 IPR000160 GGDEF domain M634_16755 bf2fa76abcf419c40dea09d01c1fe68f 710 SUPERFAMILY SSF55781 179 328 1.88E-6 T 12-10-2018 M634_16755 bf2fa76abcf419c40dea09d01c1fe68f 710 Gene3D G3DSA:3.30.450.40 174 331 3.6E-8 T 12-10-2018 IPR029016 GAF-like domain superfamily M634_16755 bf2fa76abcf419c40dea09d01c1fe68f 710 SUPERFAMILY SSF55073 537 698 6.75E-38 T 12-10-2018 IPR029787 Nucleotide cyclase M634_16755 bf2fa76abcf419c40dea09d01c1fe68f 710 Gene3D G3DSA:3.30.70.270 518 700 1.9E-44 T 12-10-2018 M634_07560 e6e058b88947a9aa5a25de21b4a32de6 456 Gene3D G3DSA:1.10.275.10 1 117 8.1E-50 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal M634_07560 e6e058b88947a9aa5a25de21b4a32de6 456 Gene3D G3DSA:1.20.200.10 118 447 1.1E-158 T 12-10-2018 M634_07560 e6e058b88947a9aa5a25de21b4a32de6 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 456 9.6E-151 T 12-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 M634_07560 e6e058b88947a9aa5a25de21b4a32de6 456 ProSitePatterns PS00163 Fumarate lyases signature. 295 304 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 M634_07560 e6e058b88947a9aa5a25de21b4a32de6 456 SUPERFAMILY SSF48557 4 448 1.12E-108 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 M634_07560 e6e058b88947a9aa5a25de21b4a32de6 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 332 446 3.7E-52 T 12-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 M634_07560 e6e058b88947a9aa5a25de21b4a32de6 456 Pfam PF00206 Lyase 14 313 4.3E-75 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal M634_07560 e6e058b88947a9aa5a25de21b4a32de6 456 Gene3D G3DSA:1.10.40.30 383 446 1.1E-158 T 12-10-2018 M634_07560 e6e058b88947a9aa5a25de21b4a32de6 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 5.9E-18 T 12-10-2018 IPR000362 Fumarate lyase family M634_07560 e6e058b88947a9aa5a25de21b4a32de6 456 PRINTS PR00149 Fumarate lyase superfamily signature 252 279 5.9E-18 T 12-10-2018 IPR000362 Fumarate lyase family M634_07560 e6e058b88947a9aa5a25de21b4a32de6 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 5.9E-18 T 12-10-2018 IPR000362 Fumarate lyase family M634_07560 e6e058b88947a9aa5a25de21b4a32de6 456 PRINTS PR00149 Fumarate lyase superfamily signature 295 311 5.9E-18 T 12-10-2018 IPR000362 Fumarate lyase family M634_12715 85b0d0032c5ec00f42141878d3710857 869 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 116 7.3E-34 T 12-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain M634_12715 85b0d0032c5ec00f42141878d3710857 869 Pfam PF12838 4Fe-4S dicluster domain 378 430 4.1E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M634_12715 85b0d0032c5ec00f42141878d3710857 869 Gene3D G3DSA:3.40.50.11540 145 290 2.1E-12 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M634_12715 85b0d0032c5ec00f42141878d3710857 869 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 447 1.5E-189 T 12-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 M634_12715 85b0d0032c5ec00f42141878d3710857 869 Gene3D G3DSA:1.10.1060.10 364 445 1.3E-12 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 M634_12715 85b0d0032c5ec00f42141878d3710857 869 Pfam PF10531 SLBB domain 296 345 2.8E-9 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M634_12715 85b0d0032c5ec00f42141878d3710857 869 SUPERFAMILY SSF142019 95 302 1.57E-59 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M634_12715 85b0d0032c5ec00f42141878d3710857 869 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 140 283 3.8E-47 T 12-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M634_12715 85b0d0032c5ec00f42141878d3710857 869 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 417 428 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M634_12715 85b0d0032c5ec00f42141878d3710857 869 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 761 251.617 T 12-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 M634_12715 85b0d0032c5ec00f42141878d3710857 869 SUPERFAMILY SSF46548 336 446 1.01E-21 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 M634_21285 943674dab3bb881cdb9701ca567be0bb 327 SUPERFAMILY SSF52540 5 302 6.81E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_21285 943674dab3bb881cdb9701ca567be0bb 327 Gene3D G3DSA:1.10.8.300 209 324 4.8E-35 T 12-10-2018 M634_21285 943674dab3bb881cdb9701ca567be0bb 327 Gene3D G3DSA:3.40.50.300 1 208 2.3E-51 T 12-10-2018 M634_21285 943674dab3bb881cdb9701ca567be0bb 327 PIRSF PIRSF002849 1 327 3.6E-128 T 12-10-2018 M634_21285 943674dab3bb881cdb9701ca567be0bb 327 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 38 170 1.1E-60 T 12-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 M634_05865 55024be1b2eb19e3fb9702f6a709db3d 248 Gene3D G3DSA:2.30.30.760 188 248 1.1E-12 T 12-10-2018 M634_05865 55024be1b2eb19e3fb9702f6a709db3d 248 SMART SM00858 126 188 1.2E-9 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 M634_05865 55024be1b2eb19e3fb9702f6a709db3d 248 Pfam PF13144 Chaperone for flagella basal body P-ring formation 52 246 3.8E-53 T 12-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal M634_05865 55024be1b2eb19e3fb9702f6a709db3d 248 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 114 246 1.0E-41 T 12-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal M634_19505 e243e3e880d07536131dbd830a5ce215 243 Pfam PF00460 Flagella basal body rod protein 7 35 1.3E-5 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 M634_19505 e243e3e880d07536131dbd830a5ce215 243 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 167 239 4.3E-16 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain M634_19505 e243e3e880d07536131dbd830a5ce215 243 SUPERFAMILY SSF117143 78 175 7.45E-11 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like M634_19505 e243e3e880d07536131dbd830a5ce215 243 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 120 5.7E-30 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G M634_09315 723591df684cda71fa6a79120b1bc4af 2702 SUPERFAMILY SSF141072 1879 1981 4.19E-8 T 12-10-2018 IPR038081 CalX-like domain superfamily M634_09315 723591df684cda71fa6a79120b1bc4af 2702 SUPERFAMILY SSF141072 1147 1249 8.63E-8 T 12-10-2018 IPR038081 CalX-like domain superfamily M634_09315 723591df684cda71fa6a79120b1bc4af 2702 SUPERFAMILY SSF141072 1268 1371 3.4E-8 T 12-10-2018 IPR038081 CalX-like domain superfamily M634_09315 723591df684cda71fa6a79120b1bc4af 2702 SUPERFAMILY SSF141072 415 517 8.63E-8 T 12-10-2018 IPR038081 CalX-like domain superfamily M634_09315 723591df684cda71fa6a79120b1bc4af 2702 SUPERFAMILY SSF51120 2551 2643 4.18E-11 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal M634_09315 723591df684cda71fa6a79120b1bc4af 2702 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2581 2599 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site M634_09315 723591df684cda71fa6a79120b1bc4af 2702 SUPERFAMILY SSF141072 293 395 3.66E-8 T 12-10-2018 IPR038081 CalX-like domain superfamily M634_09315 723591df684cda71fa6a79120b1bc4af 2702 SUPERFAMILY SSF141072 1757 1859 2.35E-7 T 12-10-2018 IPR038081 CalX-like domain superfamily M634_09315 723591df684cda71fa6a79120b1bc4af 2702 SUPERFAMILY SSF141072 2122 2231 3.27E-7 T 12-10-2018 IPR038081 CalX-like domain superfamily M634_09315 723591df684cda71fa6a79120b1bc4af 2702 SUPERFAMILY SSF141072 659 761 2.35E-7 T 12-10-2018 IPR038081 CalX-like domain superfamily M634_09315 723591df684cda71fa6a79120b1bc4af 2702 Gene3D G3DSA:2.150.10.10 2559 2695 1.3E-13 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal M634_09315 723591df684cda71fa6a79120b1bc4af 2702 SUPERFAMILY SSF141072 1635 1737 8.63E-8 T 12-10-2018 IPR038081 CalX-like domain superfamily M634_09315 723591df684cda71fa6a79120b1bc4af 2702 Pfam PF03160 Calx-beta domain 648 735 0.43 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 M634_09315 723591df684cda71fa6a79120b1bc4af 2702 Pfam PF03160 Calx-beta domain 1014 1101 0.43 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 M634_09315 723591df684cda71fa6a79120b1bc4af 2702 Pfam PF03160 Calx-beta domain 1380 1467 0.43 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 M634_09315 723591df684cda71fa6a79120b1bc4af 2702 Pfam PF03160 Calx-beta domain 1990 2077 0.087 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 M634_09315 723591df684cda71fa6a79120b1bc4af 2702 Pfam PF03160 Calx-beta domain 892 979 0.11 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 M634_09315 723591df684cda71fa6a79120b1bc4af 2702 Pfam PF03160 Calx-beta domain 1136 1223 0.12 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 M634_09315 723591df684cda71fa6a79120b1bc4af 2702 Pfam PF03160 Calx-beta domain 281 369 0.19 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 M634_09315 723591df684cda71fa6a79120b1bc4af 2702 Pfam PF03160 Calx-beta domain 1868 1955 0.087 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 M634_09315 723591df684cda71fa6a79120b1bc4af 2702 Pfam PF03160 Calx-beta domain 770 857 0.12 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 M634_09315 723591df684cda71fa6a79120b1bc4af 2702 Pfam PF03160 Calx-beta domain 1502 1589 0.12 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 M634_09315 723591df684cda71fa6a79120b1bc4af 2702 Pfam PF03160 Calx-beta domain 2113 2198 9.7 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 M634_09315 723591df684cda71fa6a79120b1bc4af 2702 Pfam PF03160 Calx-beta domain 1258 1345 0.11 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 M634_09315 723591df684cda71fa6a79120b1bc4af 2702 Pfam PF03160 Calx-beta domain 157 225 0.87 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 M634_09315 723591df684cda71fa6a79120b1bc4af 2702 Pfam PF03160 Calx-beta domain 1746 1833 0.43 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 M634_09315 723591df684cda71fa6a79120b1bc4af 2702 Pfam PF03160 Calx-beta domain 526 613 0.11 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 M634_09315 723591df684cda71fa6a79120b1bc4af 2702 Pfam PF03160 Calx-beta domain 404 491 0.12 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 M634_09315 723591df684cda71fa6a79120b1bc4af 2702 Pfam PF03160 Calx-beta domain 1624 1711 0.12 T 12-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 M634_09315 723591df684cda71fa6a79120b1bc4af 2702 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2572 2590 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site M634_09315 723591df684cda71fa6a79120b1bc4af 2702 SUPERFAMILY SSF141072 781 883 8.63E-8 T 12-10-2018 IPR038081 CalX-like domain superfamily M634_09315 723591df684cda71fa6a79120b1bc4af 2702 SUPERFAMILY SSF141072 1391 1493 2.35E-7 T 12-10-2018 IPR038081 CalX-like domain superfamily M634_09315 723591df684cda71fa6a79120b1bc4af 2702 SUPERFAMILY SSF141072 902 1005 3.4E-8 T 12-10-2018 IPR038081 CalX-like domain superfamily M634_09315 723591df684cda71fa6a79120b1bc4af 2702 SUPERFAMILY SSF141072 536 639 3.4E-8 T 12-10-2018 IPR038081 CalX-like domain superfamily M634_09315 723591df684cda71fa6a79120b1bc4af 2702 SUPERFAMILY SSF141072 151 275 9.16E-9 T 12-10-2018 IPR038081 CalX-like domain superfamily M634_09315 723591df684cda71fa6a79120b1bc4af 2702 SUPERFAMILY SSF141072 1025 1127 2.35E-7 T 12-10-2018 IPR038081 CalX-like domain superfamily M634_09315 723591df684cda71fa6a79120b1bc4af 2702 SUPERFAMILY SSF141072 1513 1615 7.06E-8 T 12-10-2018 IPR038081 CalX-like domain superfamily M634_09315 723591df684cda71fa6a79120b1bc4af 2702 SUPERFAMILY SSF141072 2001 2088 2.75E-8 T 12-10-2018 IPR038081 CalX-like domain superfamily M634_05760 56fa85e59c1a33e62640ff53cdd61231 371 SUPERFAMILY SSF55174 8 60 3.36E-14 T 12-10-2018 M634_05760 56fa85e59c1a33e62640ff53cdd61231 371 SUPERFAMILY SSF55120 66 227 2.88E-38 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 M634_05760 56fa85e59c1a33e62640ff53cdd61231 371 Pfam PF00849 RNA pseudouridylate synthase 67 193 2.5E-14 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 M634_05760 56fa85e59c1a33e62640ff53cdd61231 371 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 71 224 1.8E-48 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 M634_05760 56fa85e59c1a33e62640ff53cdd61231 371 Pfam PF01479 S4 domain 8 52 4.7E-10 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_05760 56fa85e59c1a33e62640ff53cdd61231 371 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 102 116 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 M634_05760 56fa85e59c1a33e62640ff53cdd61231 371 Gene3D G3DSA:3.30.70.580 68 227 3.7E-54 T 12-10-2018 M634_05760 56fa85e59c1a33e62640ff53cdd61231 371 Gene3D G3DSA:3.10.290.10 1 61 8.5E-22 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 M634_05760 56fa85e59c1a33e62640ff53cdd61231 371 SMART SM00363 7 65 8.8E-11 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_05760 56fa85e59c1a33e62640ff53cdd61231 371 Gene3D G3DSA:3.30.70.1560 132 205 3.7E-54 T 12-10-2018 M634_03400 320fb20e346661184450aecd575cb715 206 Pfam PF01479 S4 domain 97 143 2.5E-18 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03400 320fb20e346661184450aecd575cb715 206 SMART SM01390 3 95 6.8E-50 T 12-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 M634_03400 320fb20e346661184450aecd575cb715 206 SUPERFAMILY SSF55174 3 206 1.01E-72 T 12-10-2018 M634_03400 320fb20e346661184450aecd575cb715 206 Gene3D G3DSA:3.10.290.10 103 191 2.2E-36 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 M634_03400 320fb20e346661184450aecd575cb715 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 1.6E-32 T 12-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 M634_03400 320fb20e346661184450aecd575cb715 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.363 T 12-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 M634_03400 320fb20e346661184450aecd575cb715 206 Gene3D G3DSA:1.10.1050.10 1 102 5.8E-45 T 12-10-2018 M634_03400 320fb20e346661184450aecd575cb715 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 3.4E-85 T 12-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 M634_03400 320fb20e346661184450aecd575cb715 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 12-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03400 320fb20e346661184450aecd575cb715 206 SMART SM00363 96 160 5.9E-20 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_21765 1e9996cd3be65527839b286773b16c43 225 SMART SM00448 2 115 4.1E-19 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_21765 1e9996cd3be65527839b286773b16c43 225 SUPERFAMILY SSF52172 1 166 1.71E-30 T 12-10-2018 IPR011006 CheY-like superfamily M634_21765 1e9996cd3be65527839b286773b16c43 225 Pfam PF00072 Response regulator receiver domain 4 114 9.5E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_21765 1e9996cd3be65527839b286773b16c43 225 Gene3D G3DSA:3.40.50.12740 2 204 6.2E-25 T 12-10-2018 M634_21765 1e9996cd3be65527839b286773b16c43 225 PIRSF PIRSF006171 1 222 1.7E-73 T 12-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 M634_18245 66901ad3b89be7e057ae8ef0fd00d41b 69 Pfam PF11686 Protein of unknown function (DUF3283) 4 64 5.0E-34 T 12-10-2018 IPR021700 Protein of unknown function DUF3283 M634_24680 ff8f66308029e6087d4f9553f417b295 77 Pfam PF01313 Bacterial export proteins, family 3 3 70 3.4E-9 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 M634_22555 9705b07d338e8984225dd24b89b5fa24 518 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 516 1.2E-272 T 12-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 M634_22555 9705b07d338e8984225dd24b89b5fa24 518 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 12-10-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 M634_22555 9705b07d338e8984225dd24b89b5fa24 518 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 147 374 5.4E-75 T 12-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain M634_22555 9705b07d338e8984225dd24b89b5fa24 518 Gene3D G3DSA:3.40.50.720 143 324 1.2E-156 T 12-10-2018 M634_22555 9705b07d338e8984225dd24b89b5fa24 518 Gene3D G3DSA:3.40.50.720 3 371 1.2E-156 T 12-10-2018 M634_22555 9705b07d338e8984225dd24b89b5fa24 518 SUPERFAMILY SSF51735 143 319 1.97E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_22555 9705b07d338e8984225dd24b89b5fa24 518 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 433 516 2.1E-36 T 12-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 M634_22555 9705b07d338e8984225dd24b89b5fa24 518 SMART SM01003 4 143 1.5E-67 T 12-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal M634_22555 9705b07d338e8984225dd24b89b5fa24 518 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 143 3.4E-46 T 12-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal M634_22555 9705b07d338e8984225dd24b89b5fa24 518 SUPERFAMILY SSF52283 2 174 8.5E-51 T 12-10-2018 M634_22555 9705b07d338e8984225dd24b89b5fa24 518 SMART SM01002 152 317 2.8E-83 T 12-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain M634_22555 9705b07d338e8984225dd24b89b5fa24 518 PIRSF PIRSF000203 1 516 8.5E-270 T 12-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 M634_21305 6f917f7b703c9aba9ee1561eb9721404 576 SUPERFAMILY SSF53300 99 272 7.97E-17 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily M634_21305 6f917f7b703c9aba9ee1561eb9721404 576 SMART SM00327 99 277 0.004 T 12-10-2018 IPR002035 von Willebrand factor, type A M634_21305 6f917f7b703c9aba9ee1561eb9721404 576 Gene3D G3DSA:3.40.50.410 97 281 1.9E-26 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily M634_21305 6f917f7b703c9aba9ee1561eb9721404 576 Pfam PF13519 von Willebrand factor type A domain 102 207 3.4E-13 T 12-10-2018 IPR002035 von Willebrand factor, type A M634_04110 67bb5ecb1c2a67a3d2bcc5558626ad4e 421 Pfam PF00033 Cytochrome b/b6/petB 23 211 8.3E-66 T 12-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 M634_04110 67bb5ecb1c2a67a3d2bcc5558626ad4e 421 PIRSF PIRSF038885 1 421 6.7E-153 T 12-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 M634_04110 67bb5ecb1c2a67a3d2bcc5558626ad4e 421 Gene3D G3DSA:1.20.810.10 1 421 1.3E-149 T 12-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 M634_04110 67bb5ecb1c2a67a3d2bcc5558626ad4e 421 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 295 396 5.5E-41 T 12-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 M634_04110 67bb5ecb1c2a67a3d2bcc5558626ad4e 421 SUPERFAMILY SSF81648 297 412 1.13E-33 T 12-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 M634_04110 67bb5ecb1c2a67a3d2bcc5558626ad4e 421 SUPERFAMILY SSF81342 6 296 1.73E-92 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 M634_08660 73cfc812497c6de14bfd253c30126d21 222 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 6 220 2.4E-82 T 12-10-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-204174|Reactome: R-HSA-71182 M634_08660 73cfc812497c6de14bfd253c30126d21 222 Pfam PF13417 Glutathione S-transferase, N-terminal domain 7 84 1.8E-14 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 M634_08660 73cfc812497c6de14bfd253c30126d21 222 SUPERFAMILY SSF52833 5 89 3.01E-20 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M634_08660 73cfc812497c6de14bfd253c30126d21 222 Gene3D G3DSA:3.40.30.10 7 83 8.2E-24 T 12-10-2018 M634_08660 73cfc812497c6de14bfd253c30126d21 222 SUPERFAMILY SSF47616 88 220 1.89E-26 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily M634_08660 73cfc812497c6de14bfd253c30126d21 222 Gene3D G3DSA:1.20.1050.10 89 222 8.3E-46 T 12-10-2018 M634_08660 73cfc812497c6de14bfd253c30126d21 222 Pfam PF00043 Glutathione S-transferase, C-terminal domain 144 207 1.1E-4 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal M634_07370 f405e72e505871c33be2a7919c9ed1be 545 SMART SM00283 283 544 1.7E-74 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_07370 f405e72e505871c33be2a7919c9ed1be 545 Pfam PF00672 HAMP domain 214 264 1.6E-13 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_07370 f405e72e505871c33be2a7919c9ed1be 545 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 345 510 4.1E-43 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_07370 f405e72e505871c33be2a7919c9ed1be 545 SMART SM00304 214 268 1.8E-16 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_07370 f405e72e505871c33be2a7919c9ed1be 545 SMART SM00304 303 356 53.0 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_07370 f405e72e505871c33be2a7919c9ed1be 545 SUPERFAMILY SSF58104 236 545 1.44E-75 T 12-10-2018 M634_07370 f405e72e505871c33be2a7919c9ed1be 545 Gene3D G3DSA:1.10.287.950 214 545 4.2E-75 T 12-10-2018 M634_08820 b5705f913420387f21db30febd62e9de 264 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 183 3.7E-5 T 12-10-2018 M634_08820 b5705f913420387f21db30febd62e9de 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 2.3E-18 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_08820 b5705f913420387f21db30febd62e9de 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 2.3E-18 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_08820 b5705f913420387f21db30febd62e9de 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.3E-18 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_08820 b5705f913420387f21db30febd62e9de 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 2.3E-18 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_08820 b5705f913420387f21db30febd62e9de 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.3E-18 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_08820 b5705f913420387f21db30febd62e9de 264 SUPERFAMILY SSF51735 4 260 4.05E-55 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_08820 b5705f913420387f21db30febd62e9de 264 Pfam PF00106 short chain dehydrogenase 7 193 6.7E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_08820 b5705f913420387f21db30febd62e9de 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 5.4E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_08820 b5705f913420387f21db30febd62e9de 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 5.4E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_08820 b5705f913420387f21db30febd62e9de 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 5.4E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_08820 b5705f913420387f21db30febd62e9de 264 Gene3D G3DSA:3.40.50.720 2 261 1.1E-56 T 12-10-2018 M634_04905 f14fb03099df745256208bf077cd3c39 64 Pfam PF04384 Iron-sulphur cluster assembly 1 63 3.9E-35 T 12-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 M634_04905 f14fb03099df745256208bf077cd3c39 64 SUPERFAMILY SSF140319 1 62 3.4E-29 T 12-10-2018 IPR036762 IscX-like superfamily M634_04905 f14fb03099df745256208bf077cd3c39 64 Gene3D G3DSA:1.10.10.600 1 64 3.3E-30 T 12-10-2018 IPR036762 IscX-like superfamily M634_04905 f14fb03099df745256208bf077cd3c39 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 64 4.8E-36 T 12-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 M634_04905 f14fb03099df745256208bf077cd3c39 64 PIRSF PIRSF039003 1 64 6.4E-36 T 12-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 M634_16690 5be4695b09c290132159edcd782b5d69 446 SUPERFAMILY SSF111369 72 127 1.44E-5 T 12-10-2018 M634_16690 5be4695b09c290132159edcd782b5d69 446 Pfam PF13437 HlyD family secretion protein 302 404 5.5E-18 T 12-10-2018 M634_16690 5be4695b09c290132159edcd782b5d69 446 Gene3D G3DSA:2.40.50.100 76 130 2.8E-7 T 12-10-2018 M634_16690 5be4695b09c290132159edcd782b5d69 446 Gene3D G3DSA:2.40.30.170 339 422 1.1E-15 T 12-10-2018 M634_16690 5be4695b09c290132159edcd782b5d69 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 347 371 3.0E-40 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 M634_16690 5be4695b09c290132159edcd782b5d69 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 425 445 3.0E-40 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 M634_16690 5be4695b09c290132159edcd782b5d69 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 314 335 3.0E-40 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 M634_16690 5be4695b09c290132159edcd782b5d69 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 81 101 3.0E-40 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 M634_16690 5be4695b09c290132159edcd782b5d69 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 39 62 3.0E-40 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 M634_16690 5be4695b09c290132159edcd782b5d69 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 371 394 3.0E-40 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 M634_16690 5be4695b09c290132159edcd782b5d69 446 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 30 446 9.1E-100 T 12-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 M634_16690 5be4695b09c290132159edcd782b5d69 446 Gene3D G3DSA:2.40.50.100 302 338 1.1E-15 T 12-10-2018 M634_16690 5be4695b09c290132159edcd782b5d69 446 Pfam PF13533 Biotin-lipoyl like 79 115 2.7E-7 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain M634_16690 5be4695b09c290132159edcd782b5d69 446 Gene3D G3DSA:1.10.287.470 227 301 1.1E-15 T 12-10-2018 M634_09365 172e9b387d592147d91dc7b91bf389e5 342 SUPERFAMILY SSF53850 29 259 1.09E-49 T 12-10-2018 M634_09365 172e9b387d592147d91dc7b91bf389e5 342 Gene3D G3DSA:3.40.190.10 28 257 7.5E-51 T 12-10-2018 M634_09365 172e9b387d592147d91dc7b91bf389e5 342 Gene3D G3DSA:3.40.190.10 130 225 7.5E-51 T 12-10-2018 M634_09365 172e9b387d592147d91dc7b91bf389e5 342 SMART SM00062 38 267 2.7E-53 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M634_09365 172e9b387d592147d91dc7b91bf389e5 342 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 257 7.4E-30 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M634_05395 9426db590bbe190f535c0bca114fb4df 363 PIRSF PIRSF028774 1 362 5.6E-194 T 12-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 M634_05395 9426db590bbe190f535c0bca114fb4df 363 Pfam PF01728 FtsJ-like methyltransferase 188 281 2.7E-5 T 12-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 M634_05395 9426db590bbe190f535c0bca114fb4df 363 Gene3D G3DSA:3.30.70.2810 1 79 2.5E-33 T 12-10-2018 M634_05395 9426db590bbe190f535c0bca114fb4df 363 SUPERFAMILY SSF53335 186 298 1.31E-12 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_05395 9426db590bbe190f535c0bca114fb4df 363 Gene3D G3DSA:3.30.2300.20 80 177 1.1E-39 T 12-10-2018 M634_05395 9426db590bbe190f535c0bca114fb4df 363 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 357 83.409 T 12-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 M634_05395 9426db590bbe190f535c0bca114fb4df 363 Gene3D G3DSA:3.40.50.150 178 358 3.3E-52 T 12-10-2018 M634_16975 75943b7d40c5fa9281bb6cfcb710230d 322 Pfam PF05229 Spore Coat Protein U domain 18 155 4.0E-13 T 12-10-2018 IPR007893 Spore coat protein U M634_16975 75943b7d40c5fa9281bb6cfcb710230d 322 Pfam PF05229 Spore Coat Protein U domain 181 318 9.2E-32 T 12-10-2018 IPR007893 Spore coat protein U M634_16975 75943b7d40c5fa9281bb6cfcb710230d 322 SMART SM00972 93 157 2.0E-7 T 12-10-2018 IPR007893 Spore coat protein U M634_16975 75943b7d40c5fa9281bb6cfcb710230d 322 SMART SM00972 253 319 5.2E-10 T 12-10-2018 IPR007893 Spore coat protein U M634_19690 0edf3a137cf8d777e2879131072cc8f6 513 PRINTS PR00067 Catalase signature 313 340 2.2E-68 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M634_19690 0edf3a137cf8d777e2879131072cc8f6 513 PRINTS PR00067 Catalase signature 345 371 2.2E-68 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M634_19690 0edf3a137cf8d777e2879131072cc8f6 513 PRINTS PR00067 Catalase signature 131 148 2.2E-68 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M634_19690 0edf3a137cf8d777e2879131072cc8f6 513 PRINTS PR00067 Catalase signature 150 168 2.2E-68 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M634_19690 0edf3a137cf8d777e2879131072cc8f6 513 PRINTS PR00067 Catalase signature 47 70 2.2E-68 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M634_19690 0edf3a137cf8d777e2879131072cc8f6 513 PRINTS PR00067 Catalase signature 110 128 2.2E-68 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M634_19690 0edf3a137cf8d777e2879131072cc8f6 513 SMART SM01060 34 416 1.3E-241 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M634_19690 0edf3a137cf8d777e2879131072cc8f6 513 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 358 366 - T 12-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M634_19690 0edf3a137cf8d777e2879131072cc8f6 513 ProSitePatterns PS00438 Catalase proximal active site signature. 70 86 - T 12-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M634_19690 0edf3a137cf8d777e2879131072cc8f6 513 PIRSF PIRSF038928 24 506 6.2E-189 T 12-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M634_19690 0edf3a137cf8d777e2879131072cc8f6 513 Pfam PF00199 Catalase 34 411 1.8E-167 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M634_19690 0edf3a137cf8d777e2879131072cc8f6 513 SUPERFAMILY SSF56634 29 508 1.24E-191 T 12-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M634_19690 0edf3a137cf8d777e2879131072cc8f6 513 Gene3D G3DSA:2.40.180.10 30 513 2.0E-204 T 12-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 M634_19690 0edf3a137cf8d777e2879131072cc8f6 513 Pfam PF06628 Catalase-related immune-responsive 438 499 5.5E-19 T 12-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M634_20710 e23406c894f01d94eef31956d91cd221 411 SMART SM00852 184 321 1.6E-41 T 12-10-2018 IPR001453 MoaB/Mog domain M634_20710 e23406c894f01d94eef31956d91cd221 411 Gene3D G3DSA:3.40.980.10 179 331 1.1E-145 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily M634_20710 e23406c894f01d94eef31956d91cd221 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 11 171 1.5E-47 T 12-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 M634_20710 e23406c894f01d94eef31956d91cd221 411 Gene3D G3DSA:2.40.340.10 332 401 1.1E-145 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 M634_20710 e23406c894f01d94eef31956d91cd221 411 Gene3D G3DSA:2.170.190.11 53 145 1.1E-145 T 12-10-2018 M634_20710 e23406c894f01d94eef31956d91cd221 411 Gene3D G3DSA:3.90.105.10 31 178 1.1E-145 T 12-10-2018 M634_20710 e23406c894f01d94eef31956d91cd221 411 Pfam PF03454 MoeA C-terminal region (domain IV) 336 406 6.5E-22 T 12-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 M634_20710 e23406c894f01d94eef31956d91cd221 411 Pfam PF00994 Probable molybdopterin binding domain 186 320 4.6E-25 T 12-10-2018 IPR001453 MoaB/Mog domain M634_20710 e23406c894f01d94eef31956d91cd221 411 SUPERFAMILY SSF63882 7 180 9.81E-57 T 12-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 M634_20710 e23406c894f01d94eef31956d91cd221 411 SUPERFAMILY SSF63867 332 410 2.49E-23 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 M634_20710 e23406c894f01d94eef31956d91cd221 411 SUPERFAMILY SSF53218 181 327 1.7E-41 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily M634_20710 e23406c894f01d94eef31956d91cd221 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 180 317 3.3E-32 T 12-10-2018 IPR001453 MoaB/Mog domain M634_20710 e23406c894f01d94eef31956d91cd221 411 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 257 290 - T 12-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 M634_11195 67c4410043520dc6340d78f14c972673 93 Gene3D G3DSA:3.40.1620.40 12 74 6.7E-11 T 12-10-2018 M634_11195 67c4410043520dc6340d78f14c972673 93 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 10 74 4.7E-17 T 12-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM M634_11195 67c4410043520dc6340d78f14c972673 93 SUPERFAMILY SSF143120 10 81 2.49E-17 T 12-10-2018 IPR036165 YefM-like superfamily M634_11195 67c4410043520dc6340d78f14c972673 93 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 12 63 2.3E-13 T 12-10-2018 M634_10620 67c4410043520dc6340d78f14c972673 93 Gene3D G3DSA:3.40.1620.40 12 74 6.7E-11 T 12-10-2018 M634_10620 67c4410043520dc6340d78f14c972673 93 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 10 74 4.7E-17 T 12-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM M634_10620 67c4410043520dc6340d78f14c972673 93 SUPERFAMILY SSF143120 10 81 2.49E-17 T 12-10-2018 IPR036165 YefM-like superfamily M634_10620 67c4410043520dc6340d78f14c972673 93 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 12 63 2.3E-13 T 12-10-2018 M634_14070 f808d05c6f72f58fb554d225a6d6494d 63 Pfam PF14056 Domain of unknown function (DUF4250) 9 62 3.7E-20 T 12-10-2018 IPR025346 Protein of unknown function DUF4250 M634_09675 82f3cd71c2f0dd644357ceef0a141285 241 SUPERFAMILY SSF52467 6 234 1.58E-72 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily M634_09675 82f3cd71c2f0dd644357ceef0a141285 241 Pfam PF02146 Sir2 family 13 186 8.7E-51 T 12-10-2018 IPR003000 Sirtuin family GO:0070403 M634_09675 82f3cd71c2f0dd644357ceef0a141285 241 Gene3D G3DSA:3.30.1600.10 22 158 1.7E-81 T 12-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily M634_09675 82f3cd71c2f0dd644357ceef0a141285 241 Gene3D G3DSA:3.40.50.1220 8 227 1.7E-81 T 12-10-2018 M634_09675 82f3cd71c2f0dd644357ceef0a141285 241 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 6 236 56.653 T 12-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 M634_18095 2d3f23d0fd5fe14fb7fd426cc72b428b 616 Gene3D G3DSA:1.10.287.130 352 439 3.3E-15 T 12-10-2018 M634_18095 2d3f23d0fd5fe14fb7fd426cc72b428b 616 SMART SM00387 488 603 1.5E-24 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_18095 2d3f23d0fd5fe14fb7fd426cc72b428b 616 SUPERFAMILY SSF103190 51 185 6.28E-18 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily M634_18095 2d3f23d0fd5fe14fb7fd426cc72b428b 616 SUPERFAMILY SSF55874 446 603 1.63E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_18095 2d3f23d0fd5fe14fb7fd426cc72b428b 616 Gene3D G3DSA:3.30.565.10 447 612 4.4E-32 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_18095 2d3f23d0fd5fe14fb7fd426cc72b428b 616 Gene3D G3DSA:3.30.450.20 59 177 9.3E-61 T 12-10-2018 M634_18095 2d3f23d0fd5fe14fb7fd426cc72b428b 616 Pfam PF02743 Cache domain 40 229 7.2E-16 T 12-10-2018 IPR033479 Double Cache domain 1 M634_18095 2d3f23d0fd5fe14fb7fd426cc72b428b 616 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 491 601 2.2E-15 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_18095 2d3f23d0fd5fe14fb7fd426cc72b428b 616 SMART SM00388 376 444 0.0098 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_18095 2d3f23d0fd5fe14fb7fd426cc72b428b 616 PIRSF PIRSF036431 3 610 8.2E-200 T 12-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) M634_18095 2d3f23d0fd5fe14fb7fd426cc72b428b 616 PRINTS PR00344 Bacterial sensor protein C-terminal signature 528 542 8.0E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_18095 2d3f23d0fd5fe14fb7fd426cc72b428b 616 PRINTS PR00344 Bacterial sensor protein C-terminal signature 587 600 8.0E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_18095 2d3f23d0fd5fe14fb7fd426cc72b428b 616 PRINTS PR00344 Bacterial sensor protein C-terminal signature 546 556 8.0E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_18095 2d3f23d0fd5fe14fb7fd426cc72b428b 616 PRINTS PR00344 Bacterial sensor protein C-terminal signature 557 575 8.0E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_18095 2d3f23d0fd5fe14fb7fd426cc72b428b 616 Gene3D G3DSA:3.30.450.20 47 275 9.3E-61 T 12-10-2018 M634_18095 2d3f23d0fd5fe14fb7fd426cc72b428b 616 SUPERFAMILY SSF47384 361 443 2.35E-7 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M634_00990 55b19dd281441c9bb3ac804df8c34f6b 522 Gene3D G3DSA:1.10.10.10 5 105 3.1E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_00990 55b19dd281441c9bb3ac804df8c34f6b 522 SUPERFAMILY SSF46894 6 103 8.79E-18 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M634_00990 55b19dd281441c9bb3ac804df8c34f6b 522 SMART SM00862 24 100 1.8E-14 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_00990 55b19dd281441c9bb3ac804df8c34f6b 522 SUPERFAMILY SSF48452 338 485 7.59E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_00990 55b19dd281441c9bb3ac804df8c34f6b 522 Gene3D G3DSA:1.25.40.10 353 515 1.3E-16 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_00990 55b19dd281441c9bb3ac804df8c34f6b 522 Pfam PF00486 Transcriptional regulatory protein, C terminal 25 100 4.0E-16 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_12460 72d960ee038a1e4aa66dd3e714ce6ba0 416 SUPERFAMILY SSF53901 3 252 7.68E-81 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M634_12460 72d960ee038a1e4aa66dd3e714ce6ba0 416 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 412 8.8E-193 T 12-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 M634_12460 72d960ee038a1e4aa66dd3e714ce6ba0 416 SUPERFAMILY SSF53901 215 414 5.76E-67 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M634_12460 72d960ee038a1e4aa66dd3e714ce6ba0 416 PIRSF PIRSF000447 1 416 1.8E-203 T 12-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 M634_12460 72d960ee038a1e4aa66dd3e714ce6ba0 416 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 370 5.0E-36 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal M634_12460 72d960ee038a1e4aa66dd3e714ce6ba0 416 Gene3D G3DSA:3.40.47.10 261 414 3.8E-52 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M634_12460 72d960ee038a1e4aa66dd3e714ce6ba0 416 Gene3D G3DSA:3.40.47.10 1 255 1.2E-93 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M634_12460 72d960ee038a1e4aa66dd3e714ce6ba0 416 SMART SM00825 Beta-ketoacyl synthase 6 416 3.5E-16 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain M634_12460 72d960ee038a1e4aa66dd3e714ce6ba0 416 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site M634_12460 72d960ee038a1e4aa66dd3e714ce6ba0 416 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 3.3E-65 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal M634_18455 c6affafa6117488cb430e68cdf526b19 385 SMART SM00267 180 362 3.5E-48 T 12-10-2018 IPR000160 GGDEF domain M634_18455 c6affafa6117488cb430e68cdf526b19 385 Pfam PF00990 Diguanylate cyclase, GGDEF domain 191 358 5.6E-41 T 12-10-2018 IPR000160 GGDEF domain M634_18455 c6affafa6117488cb430e68cdf526b19 385 Gene3D G3DSA:3.30.70.270 186 377 8.0E-50 T 12-10-2018 M634_18455 c6affafa6117488cb430e68cdf526b19 385 SUPERFAMILY SSF55073 196 363 1.73E-40 T 12-10-2018 IPR029787 Nucleotide cyclase M634_18455 c6affafa6117488cb430e68cdf526b19 385 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 187 360 2.7E-40 T 12-10-2018 IPR000160 GGDEF domain M634_15350 48f0e1abe737c3e2ffcd0e56ec898f01 392 Gene3D G3DSA:3.30.9.50 81 270 5.4E-94 T 12-10-2018 M634_15350 48f0e1abe737c3e2ffcd0e56ec898f01 392 Pfam PF01494 FAD binding domain 4 337 3.5E-23 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 M634_15350 48f0e1abe737c3e2ffcd0e56ec898f01 392 Gene3D G3DSA:3.50.50.60 5 336 5.4E-94 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_15350 48f0e1abe737c3e2ffcd0e56ec898f01 392 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 5 388 2.4E-145 T 12-10-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 M634_15350 48f0e1abe737c3e2ffcd0e56ec898f01 392 SUPERFAMILY SSF51905 3 382 2.88E-47 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_15350 48f0e1abe737c3e2ffcd0e56ec898f01 392 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 12-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 M634_15350 48f0e1abe737c3e2ffcd0e56ec898f01 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 2.6E-10 T 12-10-2018 M634_15350 48f0e1abe737c3e2ffcd0e56ec898f01 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 2.6E-10 T 12-10-2018 M634_15350 48f0e1abe737c3e2ffcd0e56ec898f01 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 2.6E-10 T 12-10-2018 M634_15350 48f0e1abe737c3e2ffcd0e56ec898f01 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 2.6E-10 T 12-10-2018 M634_15350 48f0e1abe737c3e2ffcd0e56ec898f01 392 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 388 9.3E-121 T 12-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 M634_05095 5f1688d51ff96bcb3b60d5b33727b98c 581 SUPERFAMILY SSF51556 97 538 7.71E-22 T 12-10-2018 IPR032466 Metal-dependent hydrolase M634_05095 5f1688d51ff96bcb3b60d5b33727b98c 581 Pfam PF07969 Amidohydrolase family 86 578 4.8E-130 T 12-10-2018 IPR013108 Amidohydrolase 3 M634_05095 5f1688d51ff96bcb3b60d5b33727b98c 581 Gene3D G3DSA:3.10.310.70 116 246 1.9E-132 T 12-10-2018 M634_05095 5f1688d51ff96bcb3b60d5b33727b98c 581 Gene3D G3DSA:3.20.20.140 98 537 1.9E-132 T 12-10-2018 M634_05095 5f1688d51ff96bcb3b60d5b33727b98c 581 Gene3D G3DSA:2.30.40.10 44 555 1.9E-132 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 M634_05095 5f1688d51ff96bcb3b60d5b33727b98c 581 SUPERFAMILY SSF51338 36 579 3.33E-14 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 M634_07755 66b0d84e4f2a23df0429cbf3ce5e3c90 331 SMART SM00382 32 237 2.5E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_07755 66b0d84e4f2a23df0429cbf3ce5e3c90 331 SUPERFAMILY SSF52540 4 268 2.41E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_07755 66b0d84e4f2a23df0429cbf3ce5e3c90 331 Gene3D G3DSA:3.40.50.300 2 331 7.6E-74 T 12-10-2018 M634_07755 66b0d84e4f2a23df0429cbf3ce5e3c90 331 Pfam PF00005 ABC transporter 24 187 8.0E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_07755 66b0d84e4f2a23df0429cbf3ce5e3c90 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 1.8E-16 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 M634_07755 66b0d84e4f2a23df0429cbf3ce5e3c90 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 3.9E-21 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 M634_23970 3e9b301bb7a0a3d6b4794e9585bcd511 623 SUPERFAMILY SSF103190 51 184 2.88E-18 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily M634_23970 3e9b301bb7a0a3d6b4794e9585bcd511 623 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 409 589 7.4E-43 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_23970 3e9b301bb7a0a3d6b4794e9585bcd511 623 Gene3D G3DSA:1.10.287.950 291 623 3.0E-71 T 12-10-2018 M634_23970 3e9b301bb7a0a3d6b4794e9585bcd511 623 Gene3D G3DSA:3.30.450.20 49 264 9.8E-70 T 12-10-2018 M634_23970 3e9b301bb7a0a3d6b4794e9585bcd511 623 SMART SM00304 292 346 1.9E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_23970 3e9b301bb7a0a3d6b4794e9585bcd511 623 SMART SM00283 361 622 1.5E-72 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_23970 3e9b301bb7a0a3d6b4794e9585bcd511 623 Gene3D G3DSA:3.30.450.20 62 173 9.8E-70 T 12-10-2018 M634_23970 3e9b301bb7a0a3d6b4794e9585bcd511 623 SUPERFAMILY SSF58104 314 623 1.22E-75 T 12-10-2018 M634_23970 3e9b301bb7a0a3d6b4794e9585bcd511 623 Pfam PF02743 Cache domain 33 254 2.7E-32 T 12-10-2018 IPR033479 Double Cache domain 1 M634_23970 3e9b301bb7a0a3d6b4794e9585bcd511 623 Pfam PF00672 HAMP domain 292 343 8.0E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_17235 9ce8b76f7e775d6e5573745735ec6da0 330 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 10 62 1.9E-17 T 12-10-2018 IPR025713 Motility protein B, N-terminal domain M634_17235 9ce8b76f7e775d6e5573745735ec6da0 330 Gene3D G3DSA:3.30.1330.60 123 306 3.9E-42 T 12-10-2018 IPR036737 OmpA-like domain superfamily M634_17235 9ce8b76f7e775d6e5573745735ec6da0 330 SUPERFAMILY SSF103088 154 274 1.05E-18 T 12-10-2018 IPR036737 OmpA-like domain superfamily M634_17235 9ce8b76f7e775d6e5573745735ec6da0 330 Pfam PF00691 OmpA family 170 266 4.2E-11 T 12-10-2018 IPR006665 OmpA-like domain M634_19515 b04203727cc991a93953db08735a07bd 233 Hamap MF_00415 Flagellar L-ring protein [flgH]. 11 230 25.601 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 M634_19515 b04203727cc991a93953db08735a07bd 233 Pfam PF02107 Flagellar L-ring protein 57 230 2.2E-60 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 M634_19515 b04203727cc991a93953db08735a07bd 233 PRINTS PR01008 Flagellar L-ring protein signature 193 207 3.9E-22 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 M634_19515 b04203727cc991a93953db08735a07bd 233 PRINTS PR01008 Flagellar L-ring protein signature 146 161 3.9E-22 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 M634_19515 b04203727cc991a93953db08735a07bd 233 PRINTS PR01008 Flagellar L-ring protein signature 78 90 3.9E-22 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 M634_19515 b04203727cc991a93953db08735a07bd 233 PRINTS PR01008 Flagellar L-ring protein signature 209 223 3.9E-22 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 M634_19515 b04203727cc991a93953db08735a07bd 233 PRINTS PR01008 Flagellar L-ring protein signature 172 188 3.9E-22 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 M634_22590 1fc807c31cff6e3868769275bff4c1a7 368 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 3 358 3.4E-140 T 12-10-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 M634_22590 1fc807c31cff6e3868769275bff4c1a7 368 Gene3D G3DSA:3.40.50.300 4 234 5.9E-57 T 12-10-2018 M634_22590 1fc807c31cff6e3868769275bff4c1a7 368 Pfam PF03459 TOBE domain 292 358 1.9E-14 T 12-10-2018 IPR005116 Transport-associated OB, type 1 M634_22590 1fc807c31cff6e3868769275bff4c1a7 368 SUPERFAMILY SSF50331 235 358 1.96E-18 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal M634_22590 1fc807c31cff6e3868769275bff4c1a7 368 Pfam PF00005 ABC transporter 17 157 5.9E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_22590 1fc807c31cff6e3868769275bff4c1a7 368 SMART SM00382 24 206 6.7E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_22590 1fc807c31cff6e3868769275bff4c1a7 368 Gene3D G3DSA:2.40.50.100 291 359 1.1E-14 T 12-10-2018 M634_22590 1fc807c31cff6e3868769275bff4c1a7 368 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_22590 1fc807c31cff6e3868769275bff4c1a7 368 SUPERFAMILY SSF52540 11 235 2.66E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_16890 78f01b5466a555e7b83273f43e4a70d1 284 Gene3D G3DSA:3.30.70.20 220 280 4.5E-7 T 12-10-2018 M634_16890 78f01b5466a555e7b83273f43e4a70d1 284 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 257 268 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M634_16890 78f01b5466a555e7b83273f43e4a70d1 284 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 25 275 7.3E-110 T 12-10-2018 IPR011886 Ferredoxin-type protein, NapH/MauN family M634_16890 78f01b5466a555e7b83273f43e4a70d1 284 Pfam PF12801 4Fe-4S binding domain 82 127 1.2E-13 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M634_16890 78f01b5466a555e7b83273f43e4a70d1 284 Pfam PF12801 4Fe-4S binding domain 174 211 3.0E-5 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M634_16890 78f01b5466a555e7b83273f43e4a70d1 284 Pfam PF13187 4Fe-4S dicluster domain 224 270 3.7E-7 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M634_16890 78f01b5466a555e7b83273f43e4a70d1 284 SUPERFAMILY SSF54862 94 277 5.65E-20 T 12-10-2018 M634_09810 ab66ad55c43f93c4b9b10f6666d56c73 277 Gene3D G3DSA:3.40.140.10 122 273 3.2E-42 T 12-10-2018 M634_09810 ab66ad55c43f93c4b9b10f6666d56c73 277 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 11 267 25.942 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 M634_09810 ab66ad55c43f93c4b9b10f6666d56c73 277 Gene3D G3DSA:3.10.20.10 36 118 1.0E-9 T 12-10-2018 M634_09810 ab66ad55c43f93c4b9b10f6666d56c73 277 Pfam PF02634 FdhD/NarQ family 35 266 2.5E-73 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 M634_09810 ab66ad55c43f93c4b9b10f6666d56c73 277 SUPERFAMILY SSF53927 15 266 2.05E-70 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 M634_09810 ab66ad55c43f93c4b9b10f6666d56c73 277 PIRSF PIRSF015626 2 271 1.1E-97 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 M634_14655 d081880ea17bbe0295850cc9f806e1b0 905 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 2.4E-8 T 12-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal M634_14655 d081880ea17bbe0295850cc9f806e1b0 905 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 330 379 5.8E-14 T 12-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal M634_14655 d081880ea17bbe0295850cc9f806e1b0 905 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 62 100 7.3E-16 T 12-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial M634_14655 d081880ea17bbe0295850cc9f806e1b0 905 ProSitePatterns PS01176 Initiation factor 2 signature. 855 877 - T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 M634_14655 d081880ea17bbe0295850cc9f806e1b0 905 SUPERFAMILY SSF50447 578 659 1.93E-23 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily M634_14655 d081880ea17bbe0295850cc9f806e1b0 905 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 408 562 7.7E-34 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 M634_14655 d081880ea17bbe0295850cc9f806e1b0 905 Gene3D G3DSA:3.40.50.10050 699 805 3.7E-38 T 12-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily M634_14655 d081880ea17bbe0295850cc9f806e1b0 905 Pfam PF11987 Translation-initiation factor 2 689 794 1.3E-37 T 12-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 M634_14655 d081880ea17bbe0295850cc9f806e1b0 905 Pfam PF00009 Elongation factor Tu GTP binding domain 408 564 3.5E-32 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_14655 d081880ea17bbe0295850cc9f806e1b0 905 SUPERFAMILY SSF50447 806 902 1.59E-34 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily M634_14655 d081880ea17bbe0295850cc9f806e1b0 905 SUPERFAMILY SSF52156 682 811 8.24E-39 T 12-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily M634_14655 d081880ea17bbe0295850cc9f806e1b0 905 SUPERFAMILY SSF46955 3 50 3.11E-12 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily M634_14655 d081880ea17bbe0295850cc9f806e1b0 905 SUPERFAMILY SSF52540 403 569 6.19E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_14655 d081880ea17bbe0295850cc9f806e1b0 905 Gene3D G3DSA:3.40.50.300 402 575 6.0E-70 T 12-10-2018 M634_14655 d081880ea17bbe0295850cc9f806e1b0 905 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 902 17.648 T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 M634_14655 d081880ea17bbe0295850cc9f806e1b0 905 Gene3D G3DSA:2.40.30.10 576 694 4.2E-40 T 12-10-2018 M634_14655 d081880ea17bbe0295850cc9f806e1b0 905 Gene3D G3DSA:2.40.30.10 806 903 1.7E-34 T 12-10-2018 M634_14655 d081880ea17bbe0295850cc9f806e1b0 905 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 322 904 1.8E-285 T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 M634_14655 d081880ea17bbe0295850cc9f806e1b0 905 Gene3D G3DSA:3.30.56.50 2 50 3.2E-23 T 12-10-2018 M634_04410 5daae2d69a391b3b4e308b8bc4644751 407 Pfam PF00270 DEAD/DEAH box helicase 27 195 4.7E-45 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 M634_04410 5daae2d69a391b3b4e308b8bc4644751 407 Pfam PF00271 Helicase conserved C-terminal domain 235 341 2.5E-31 T 12-10-2018 IPR001650 Helicase, C-terminal M634_04410 5daae2d69a391b3b4e308b8bc4644751 407 Gene3D G3DSA:3.40.50.300 217 407 3.1E-52 T 12-10-2018 M634_04410 5daae2d69a391b3b4e308b8bc4644751 407 SUPERFAMILY SSF52540 76 358 1.12E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_04410 5daae2d69a391b3b4e308b8bc4644751 407 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 3 407 49.707 T 12-10-2018 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 M634_04410 5daae2d69a391b3b4e308b8bc4644751 407 SMART SM00487 22 222 3.4E-55 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M634_04410 5daae2d69a391b3b4e308b8bc4644751 407 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site M634_04410 5daae2d69a391b3b4e308b8bc4644751 407 Gene3D G3DSA:3.40.50.300 1 211 1.7E-70 T 12-10-2018 M634_04410 5daae2d69a391b3b4e308b8bc4644751 407 SMART SM00490 260 341 1.3E-31 T 12-10-2018 IPR001650 Helicase, C-terminal M634_18015 fdb938c2d93a594fc1680a2e4cb11328 616 SUPERFAMILY SSF90123 28 347 7.98E-53 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M634_18015 fdb938c2d93a594fc1680a2e4cb11328 616 SMART SM00382 386 577 4.9E-19 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_18015 fdb938c2d93a594fc1680a2e4cb11328 616 Pfam PF00005 ABC transporter 378 531 2.9E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_18015 fdb938c2d93a594fc1680a2e4cb11328 616 SUPERFAMILY SSF52540 350 601 1.45E-89 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_18015 fdb938c2d93a594fc1680a2e4cb11328 616 Pfam PF00664 ABC transporter transmembrane region 40 308 2.3E-17 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 M634_18015 fdb938c2d93a594fc1680a2e4cb11328 616 Gene3D G3DSA:1.20.1560.10 9 339 1.7E-26 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M634_18015 fdb938c2d93a594fc1680a2e4cb11328 616 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_18015 fdb938c2d93a594fc1680a2e4cb11328 616 Gene3D G3DSA:3.40.50.300 351 605 1.8E-92 T 12-10-2018 M634_09165 3e624fc2d75ff1c82c8794e910b5cd2b 94 Pfam PF07216 LcrG protein 1 94 1.6E-42 T 12-10-2018 IPR009863 Type III secretion protein, LcrG M634_09165 3e624fc2d75ff1c82c8794e910b5cd2b 94 TIGRFAM TIGR02573 LcrG_PcrG: type III secretion protein LcrG 2 94 7.0E-43 T 12-10-2018 IPR009863 Type III secretion protein, LcrG M634_09165 3e624fc2d75ff1c82c8794e910b5cd2b 94 ProDom PD020116 PLASMID ACRG TYPE III G SECRETION REGULATOR LCRG LOCUS RESPONSE 2 94 3.0E-30 T 12-10-2018 IPR009863 Type III secretion protein, LcrG M634_08750 5acc4feca2d2da8e124a24d4a82fb4f7 445 SMART SM00100 2 124 0.0017 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain M634_08750 5acc4feca2d2da8e124a24d4a82fb4f7 445 Pfam PF00027 Cyclic nucleotide-binding domain 22 101 2.7E-9 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain M634_08750 5acc4feca2d2da8e124a24d4a82fb4f7 445 Gene3D G3DSA:3.30.565.10 291 443 6.4E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_08750 5acc4feca2d2da8e124a24d4a82fb4f7 445 SMART SM00387 329 440 3.3E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_08750 5acc4feca2d2da8e124a24d4a82fb4f7 445 Gene3D G3DSA:1.10.287.130 132 284 7.8E-10 T 12-10-2018 M634_08750 5acc4feca2d2da8e124a24d4a82fb4f7 445 Gene3D G3DSA:2.60.120.10 11 131 1.9E-12 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M634_08750 5acc4feca2d2da8e124a24d4a82fb4f7 445 SUPERFAMILY SSF51206 19 132 2.88E-16 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like M634_08750 5acc4feca2d2da8e124a24d4a82fb4f7 445 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 330 439 7.5E-15 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_08750 5acc4feca2d2da8e124a24d4a82fb4f7 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 396 6.1E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_08750 5acc4feca2d2da8e124a24d4a82fb4f7 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 382 6.1E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_08750 5acc4feca2d2da8e124a24d4a82fb4f7 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 419 6.1E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_08750 5acc4feca2d2da8e124a24d4a82fb4f7 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 437 6.1E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_08750 5acc4feca2d2da8e124a24d4a82fb4f7 445 SUPERFAMILY SSF55874 293 437 5.89E-28 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_10205 49ebaa91745f29ce3f86a7d0ced26aba 121 PIRSF PIRSF039020 1 121 2.7E-43 T 12-10-2018 IPR026275 Glyoxalase/dioxygenase/EhpR M634_10205 49ebaa91745f29ce3f86a7d0ced26aba 121 Gene3D G3DSA:3.10.180.10 1 120 1.9E-36 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M634_10205 49ebaa91745f29ce3f86a7d0ced26aba 121 SUPERFAMILY SSF54593 4 118 7.19E-16 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M634_21440 3e4971dc0871a5078e99eba0e6298ade 907 Pfam PF00694 Aconitase C-terminal domain 687 827 5.3E-32 T 12-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 M634_21440 3e4971dc0871a5078e99eba0e6298ade 907 Pfam PF00330 Aconitase family (aconitate hydratase) 86 562 1.7E-169 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M634_21440 3e4971dc0871a5078e99eba0e6298ade 907 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 23 899 0.0 T 12-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 M634_21440 3e4971dc0871a5078e99eba0e6298ade 907 ProSitePatterns PS00450 Aconitase family signature 1. 427 443 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 M634_21440 3e4971dc0871a5078e99eba0e6298ade 907 Gene3D G3DSA:1.10.1440.20 595 648 2.7E-14 T 12-10-2018 M634_21440 3e4971dc0871a5078e99eba0e6298ade 907 Gene3D G3DSA:3.30.499.20 9 379 3.0E-144 T 12-10-2018 M634_21440 3e4971dc0871a5078e99eba0e6298ade 907 SUPERFAMILY SSF52016 630 899 9.42E-70 T 12-10-2018 M634_21440 3e4971dc0871a5078e99eba0e6298ade 907 Gene3D G3DSA:3.20.19.10 649 901 1.1E-86 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 M634_21440 3e4971dc0871a5078e99eba0e6298ade 907 Gene3D G3DSA:3.30.499.10 381 590 1.5E-86 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 M634_21440 3e4971dc0871a5078e99eba0e6298ade 907 SUPERFAMILY SSF53732 12 626 1.7E-198 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 M634_21440 3e4971dc0871a5078e99eba0e6298ade 907 PRINTS PR00415 Aconitase family signature 210 223 6.1E-41 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M634_21440 3e4971dc0871a5078e99eba0e6298ade 907 PRINTS PR00415 Aconitase family signature 224 239 6.1E-41 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M634_21440 3e4971dc0871a5078e99eba0e6298ade 907 PRINTS PR00415 Aconitase family signature 380 394 6.1E-41 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M634_21440 3e4971dc0871a5078e99eba0e6298ade 907 PRINTS PR00415 Aconitase family signature 431 442 6.1E-41 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M634_21440 3e4971dc0871a5078e99eba0e6298ade 907 PRINTS PR00415 Aconitase family signature 286 299 6.1E-41 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M634_21440 3e4971dc0871a5078e99eba0e6298ade 907 PRINTS PR00415 Aconitase family signature 156 169 6.1E-41 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M634_21440 3e4971dc0871a5078e99eba0e6298ade 907 PRINTS PR00415 Aconitase family signature 300 313 6.1E-41 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M634_21440 3e4971dc0871a5078e99eba0e6298ade 907 PRINTS PR00415 Aconitase family signature 180 188 6.1E-41 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M634_21440 3e4971dc0871a5078e99eba0e6298ade 907 PRINTS PR00415 Aconitase family signature 493 506 6.1E-41 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M634_03335 c79b300d389d473d91e755b7152d36e5 105 Gene3D G3DSA:2.30.30.30 2 104 8.6E-40 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 M634_03335 c79b300d389d473d91e755b7152d36e5 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 102 5.9E-23 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03335 c79b300d389d473d91e755b7152d36e5 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 7.7E-40 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03335 c79b300d389d473d91e755b7152d36e5 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 20.041 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03335 c79b300d389d473d91e755b7152d36e5 105 Pfam PF00467 KOW motif 8 37 7.8E-6 T 12-10-2018 IPR005824 KOW M634_03335 c79b300d389d473d91e755b7152d36e5 105 SUPERFAMILY SSF50104 4 101 5.16E-34 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily M634_03335 c79b300d389d473d91e755b7152d36e5 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 12-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_03335 c79b300d389d473d91e755b7152d36e5 105 SMART SM00739 4 31 3.4E-4 T 12-10-2018 IPR005824 KOW M634_07880 19705cf5ebad233831a1da372fee335c 215 SUPERFAMILY SSF52540 10 199 3.45E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_07880 19705cf5ebad233831a1da372fee335c 215 Pfam PF00005 ABC transporter 21 163 2.5E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_07880 19705cf5ebad233831a1da372fee335c 215 SMART SM00382 28 214 8.0E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_07880 19705cf5ebad233831a1da372fee335c 215 Gene3D G3DSA:3.40.50.300 1 205 3.8E-53 T 12-10-2018 M634_01085 1694c1c947e59f041f23e5217af7a6f4 1400 Gene3D G3DSA:2.40.50.100 1022 1126 1.2E-29 T 12-10-2018 M634_01085 1694c1c947e59f041f23e5217af7a6f4 1400 SUPERFAMILY SSF64484 16 1363 0.0 T 12-10-2018 M634_01085 1694c1c947e59f041f23e5217af7a6f4 1400 Gene3D G3DSA:2.40.50.100 1151 1214 4.4E-64 T 12-10-2018 M634_01085 1694c1c947e59f041f23e5217af7a6f4 1400 Gene3D G3DSA:2.40.50.100 948 1021 1.5E-24 T 12-10-2018 M634_01085 1694c1c947e59f041f23e5217af7a6f4 1400 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1376 18.988 T 12-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M634_01085 1694c1c947e59f041f23e5217af7a6f4 1400 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 2.1E-27 T 12-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M634_01085 1694c1c947e59f041f23e5217af7a6f4 1400 Gene3D G3DSA:1.10.150.390 1315 1376 1.0E-28 T 12-10-2018 M634_01085 1694c1c947e59f041f23e5217af7a6f4 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 395 4.5E-8 T 12-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M634_01085 1694c1c947e59f041f23e5217af7a6f4 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 485 1.9E-27 T 12-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M634_01085 1694c1c947e59f041f23e5217af7a6f4 1400 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1366 0.0 T 12-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M634_01085 1694c1c947e59f041f23e5217af7a6f4 1400 Gene3D G3DSA:1.10.274.100 490 640 4.2E-40 T 12-10-2018 M634_01085 1694c1c947e59f041f23e5217af7a6f4 1400 Gene3D G3DSA:1.10.1790.20 1135 1313 4.4E-64 T 12-10-2018 M634_01085 1694c1c947e59f041f23e5217af7a6f4 1400 Gene3D G3DSA:1.10.40.90 374 416 3.1E-22 T 12-10-2018 M634_01085 1694c1c947e59f041f23e5217af7a6f4 1400 Gene3D G3DSA:1.10.132.30 641 790 3.4E-66 T 12-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M634_01085 1694c1c947e59f041f23e5217af7a6f4 1400 SMART SM00663 235 514 1.1E-184 T 12-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M634_01085 1694c1c947e59f041f23e5217af7a6f4 1400 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 3.7E-87 T 12-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M634_01085 1694c1c947e59f041f23e5217af7a6f4 1400 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1314 1.4E-77 T 12-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M634_01085 1694c1c947e59f041f23e5217af7a6f4 1400 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 5.2E-19 T 12-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M634_15800 fa9bc0ef61cd02c624a5922cb5ce527a 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 332 1.7E-132 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 M634_15800 fa9bc0ef61cd02c624a5922cb5ce527a 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 2.4E-25 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 M634_15800 fa9bc0ef61cd02c624a5922cb5ce527a 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 2.4E-25 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 M634_15800 fa9bc0ef61cd02c624a5922cb5ce527a 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 2.4E-25 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 M634_15800 fa9bc0ef61cd02c624a5922cb5ce527a 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 2.4E-25 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 M634_15800 fa9bc0ef61cd02c624a5922cb5ce527a 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 330 5.3E-56 T 12-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 M634_15800 fa9bc0ef61cd02c624a5922cb5ce527a 334 Gene3D G3DSA:3.40.50.1370 5 329 1.8E-145 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 M634_15800 fa9bc0ef61cd02c624a5922cb5ce527a 334 Gene3D G3DSA:3.40.50.1370 151 319 1.8E-145 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 M634_15800 fa9bc0ef61cd02c624a5922cb5ce527a 334 SUPERFAMILY SSF53671 4 333 6.29E-99 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 M634_15800 fa9bc0ef61cd02c624a5922cb5ce527a 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 333 83.355 T 12-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 M634_15800 fa9bc0ef61cd02c624a5922cb5ce527a 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 M634_15800 fa9bc0ef61cd02c624a5922cb5ce527a 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 4.1E-32 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 M634_15800 fa9bc0ef61cd02c624a5922cb5ce527a 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 4.1E-32 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 M634_15800 fa9bc0ef61cd02c624a5922cb5ce527a 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 4.1E-32 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 M634_15800 fa9bc0ef61cd02c624a5922cb5ce527a 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 4.1E-32 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 M634_15800 fa9bc0ef61cd02c624a5922cb5ce527a 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 4.1E-32 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 M634_15800 fa9bc0ef61cd02c624a5922cb5ce527a 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 3.1E-46 T 12-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 M634_11270 54221f5aa499acb9ffe4304ecd6bfc3d 566 SUPERFAMILY SSF55874 258 425 1.15E-42 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_11270 54221f5aa499acb9ffe4304ecd6bfc3d 566 SMART SM00388 204 269 8.3E-21 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_11270 54221f5aa499acb9ffe4304ecd6bfc3d 566 Pfam PF00072 Response regulator receiver domain 451 558 1.2E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_11270 54221f5aa499acb9ffe4304ecd6bfc3d 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 424 1.1E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_11270 54221f5aa499acb9ffe4304ecd6bfc3d 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 366 1.1E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_11270 54221f5aa499acb9ffe4304ecd6bfc3d 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 380 1.1E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_11270 54221f5aa499acb9ffe4304ecd6bfc3d 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 405 1.1E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_11270 54221f5aa499acb9ffe4304ecd6bfc3d 566 Gene3D G3DSA:3.40.50.2300 447 566 4.1E-35 T 12-10-2018 M634_11270 54221f5aa499acb9ffe4304ecd6bfc3d 566 Gene3D G3DSA:1.10.287.130 180 267 1.0E-22 T 12-10-2018 M634_11270 54221f5aa499acb9ffe4304ecd6bfc3d 566 Gene3D G3DSA:3.30.565.10 268 430 8.2E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_11270 54221f5aa499acb9ffe4304ecd6bfc3d 566 SUPERFAMILY SSF52172 448 565 8.82E-34 T 12-10-2018 IPR011006 CheY-like superfamily M634_11270 54221f5aa499acb9ffe4304ecd6bfc3d 566 SMART SM00448 449 560 5.9E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_11270 54221f5aa499acb9ffe4304ecd6bfc3d 566 Pfam PF00512 His Kinase A (phospho-acceptor) domain 206 269 1.2E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_11270 54221f5aa499acb9ffe4304ecd6bfc3d 566 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 316 426 9.7E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_11270 54221f5aa499acb9ffe4304ecd6bfc3d 566 SUPERFAMILY SSF47384 193 269 1.39E-19 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M634_11270 54221f5aa499acb9ffe4304ecd6bfc3d 566 SMART SM00387 316 427 6.4E-37 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_00485 6f630d4bcb631d9b17872bbe3fc694de 247 SUPERFAMILY SSF55315 3 77 1.29E-19 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like M634_00485 6f630d4bcb631d9b17872bbe3fc694de 247 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 243 1.2E-86 T 12-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 M634_00485 6f630d4bcb631d9b17872bbe3fc694de 247 SMART SM00967 5 81 1.6E-19 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 M634_00485 6f630d4bcb631d9b17872bbe3fc694de 247 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 79 3.6E-19 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 M634_00485 6f630d4bcb631d9b17872bbe3fc694de 247 Gene3D G3DSA:3.30.1330.30 1 77 8.1E-27 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like M634_00485 6f630d4bcb631d9b17872bbe3fc694de 247 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 3 244 43.389 T 12-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB M634_00485 6f630d4bcb631d9b17872bbe3fc694de 247 SUPERFAMILY SSF75217 69 245 4.19E-49 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases M634_00485 6f630d4bcb631d9b17872bbe3fc694de 247 Pfam PF00588 SpoU rRNA Methylase family 97 237 1.6E-39 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 M634_00485 6f630d4bcb631d9b17872bbe3fc694de 247 Gene3D G3DSA:3.40.1280.10 78 244 1.8E-64 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal M634_03245 5fe094ac046cb839037b65304aaf627b 183 PIRSF PIRSF039093 1 175 1.5E-87 T 12-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 M634_03245 5fe094ac046cb839037b65304aaf627b 183 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 3.6E-87 T 12-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 M634_03245 5fe094ac046cb839037b65304aaf627b 183 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 42.13 T 12-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 M634_03245 5fe094ac046cb839037b65304aaf627b 183 SUPERFAMILY SSF56235 2 172 6.92E-58 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal M634_03245 5fe094ac046cb839037b65304aaf627b 183 Pfam PF00227 Proteasome subunit 2 169 8.2E-24 T 12-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 M634_03245 5fe094ac046cb839037b65304aaf627b 183 Gene3D G3DSA:3.60.20.10 1 173 1.8E-67 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal M634_08720 0c8311e7b96a928cf752f4497afa036e 283 Gene3D G3DSA:3.30.420.10 118 271 1.3E-17 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M634_08720 0c8311e7b96a928cf752f4497afa036e 283 Pfam PF00665 Integrase core domain 121 234 1.9E-30 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M634_08720 0c8311e7b96a928cf752f4497afa036e 283 Pfam PF13276 HTH-like domain 42 96 1.5E-7 T 12-10-2018 IPR025948 HTH-like domain M634_08720 0c8311e7b96a928cf752f4497afa036e 283 SUPERFAMILY SSF53098 120 280 6.68E-40 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M634_23770 1441fd7a84b9fda869c14ebc647f5300 447 SUPERFAMILY SSF55785 147 247 1.62E-19 T 12-10-2018 IPR035965 PAS domain superfamily M634_23770 1441fd7a84b9fda869c14ebc647f5300 447 Pfam PF08447 PAS fold 160 243 3.7E-9 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 M634_23770 1441fd7a84b9fda869c14ebc647f5300 447 Gene3D G3DSA:1.10.287.950 248 446 1.1E-39 T 12-10-2018 M634_23770 1441fd7a84b9fda869c14ebc647f5300 447 SUPERFAMILY SSF58104 234 435 1.57E-45 T 12-10-2018 M634_23770 1441fd7a84b9fda869c14ebc647f5300 447 Gene3D G3DSA:3.30.450.20 4 144 3.6E-19 T 12-10-2018 M634_23770 1441fd7a84b9fda869c14ebc647f5300 447 Gene3D G3DSA:3.30.450.20 147 247 3.8E-16 T 12-10-2018 M634_23770 1441fd7a84b9fda869c14ebc647f5300 447 Pfam PF13426 PAS domain 28 129 4.6E-9 T 12-10-2018 IPR000014 PAS domain M634_23770 1441fd7a84b9fda869c14ebc647f5300 447 SUPERFAMILY SSF55785 25 127 5.93E-18 T 12-10-2018 IPR035965 PAS domain superfamily M634_23770 1441fd7a84b9fda869c14ebc647f5300 447 SMART SM00086 208 250 0.0049 T 12-10-2018 IPR001610 PAC motif M634_23770 1441fd7a84b9fda869c14ebc647f5300 447 SMART SM00086 88 130 2.6 T 12-10-2018 IPR001610 PAC motif M634_23770 1441fd7a84b9fda869c14ebc647f5300 447 SMART SM00283 239 437 2.1E-7 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_23770 1441fd7a84b9fda869c14ebc647f5300 447 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 352 381 4.7E-18 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M634_23770 1441fd7a84b9fda869c14ebc647f5300 447 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 323 350 4.7E-18 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M634_23770 1441fd7a84b9fda869c14ebc647f5300 447 SMART SM00091 135 203 0.045 T 12-10-2018 IPR000014 PAS domain M634_23770 1441fd7a84b9fda869c14ebc647f5300 447 SMART SM00091 13 83 4.2 T 12-10-2018 IPR000014 PAS domain M634_23770 1441fd7a84b9fda869c14ebc647f5300 447 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 290 432 4.5E-32 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_23770 1441fd7a84b9fda869c14ebc647f5300 447 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 145 253 1.3E-13 T 12-10-2018 IPR000014 PAS domain M634_23770 1441fd7a84b9fda869c14ebc647f5300 447 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 24 131 3.9E-12 T 12-10-2018 IPR000014 PAS domain M634_20770 ac04b89ad7aff73d52ecf29d1d49f05a 348 PIRSF PIRSF000235 1 348 1.7E-195 T 12-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 M634_20770 ac04b89ad7aff73d52ecf29d1d49f05a 348 Gene3D G3DSA:3.20.20.70 1 345 3.7E-116 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_20770 ac04b89ad7aff73d52ecf29d1d49f05a 348 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 338 1.7E-79 T 12-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 M634_20770 ac04b89ad7aff73d52ecf29d1d49f05a 348 Hamap MF_00596 GMP reductase [guaC]. 1 345 49.85 T 12-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 M634_20770 ac04b89ad7aff73d52ecf29d1d49f05a 348 SUPERFAMILY SSF51412 6 336 6.67E-98 T 12-10-2018 M634_20770 ac04b89ad7aff73d52ecf29d1d49f05a 348 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 12-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 M634_20770 ac04b89ad7aff73d52ecf29d1d49f05a 348 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 3.3E-184 T 12-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 M634_20770 ac04b89ad7aff73d52ecf29d1d49f05a 348 SMART SM01240 7 344 4.4E-136 T 12-10-2018 M634_16955 eea73934f2544a16869f9241c0bfd8d5 379 Gene3D G3DSA:3.20.20.70 3 378 2.7E-126 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_16955 eea73934f2544a16869f9241c0bfd8d5 379 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 12-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 M634_16955 eea73934f2544a16869f9241c0bfd8d5 379 PIRSF PIRSF000138 2 379 3.8E-122 T 12-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 M634_16955 eea73934f2544a16869f9241c0bfd8d5 379 SUPERFAMILY SSF51395 7 375 1.53E-98 T 12-10-2018 M634_16955 eea73934f2544a16869f9241c0bfd8d5 379 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 379 71.847 T 12-10-2018 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 M634_16955 eea73934f2544a16869f9241c0bfd8d5 379 Pfam PF01070 FMN-dependent dehydrogenase 13 375 4.6E-126 T 12-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 M634_19330 23505845884b3d9722cf3cc3d13bd98f 147 Gene3D G3DSA:3.40.930.10 1 147 2.2E-57 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 M634_19330 23505845884b3d9722cf3cc3d13bd98f 147 SUPERFAMILY SSF55804 1 146 6.02E-42 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 M634_19330 23505845884b3d9722cf3cc3d13bd98f 147 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 12-10-2018 IPR002178 PTS EIIA type-2 domain M634_19330 23505845884b3d9722cf3cc3d13bd98f 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 146 3.3E-37 T 12-10-2018 IPR002178 PTS EIIA type-2 domain M634_01310 d0d6cbd3f0a12a12f1f2e0773d0c0e61 199 Gene3D G3DSA:3.40.50.150 6 199 5.3E-63 T 12-10-2018 M634_01310 d0d6cbd3f0a12a12f1f2e0773d0c0e61 199 Pfam PF03602 Conserved hypothetical protein 95 19 195 1.5E-61 T 12-10-2018 M634_01310 d0d6cbd3f0a12a12f1f2e0773d0c0e61 199 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 17 196 1.9E-60 T 12-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 M634_01310 d0d6cbd3f0a12a12f1f2e0773d0c0e61 199 SUPERFAMILY SSF53335 19 196 3.63E-54 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_01310 d0d6cbd3f0a12a12f1f2e0773d0c0e61 199 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 131 137 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 M634_01310 d0d6cbd3f0a12a12f1f2e0773d0c0e61 199 PIRSF PIRSF004553 18 198 2.1E-55 T 12-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 M634_06930 1daeecf015ea74373340e4bdcd73fd21 59 Pfam PF03966 Trm112p-like protein 2 41 2.8E-11 T 12-10-2018 IPR005651 Trm112-like M634_06930 1daeecf015ea74373340e4bdcd73fd21 59 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 27.799 T 12-10-2018 IPR038053 Uncharacterised protein family UPF0434 M634_06930 1daeecf015ea74373340e4bdcd73fd21 59 Gene3D G3DSA:2.20.25.10 8 59 3.0E-24 T 12-10-2018 M634_06930 1daeecf015ea74373340e4bdcd73fd21 59 SUPERFAMILY SSF158997 1 54 1.05E-20 T 12-10-2018 M634_02585 5960e06dbbf0771ecf7db637ce678d3f 467 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 466 4.6E-238 T 12-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 M634_02585 5960e06dbbf0771ecf7db637ce678d3f 467 SMART SM00382 162 316 1.4E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_02585 5960e06dbbf0771ecf7db637ce678d3f 467 Gene3D G3DSA:1.10.8.60 313 380 1.6E-17 T 12-10-2018 M634_02585 5960e06dbbf0771ecf7db637ce678d3f 467 SUPERFAMILY SSF52540 141 385 1.41E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_02585 5960e06dbbf0771ecf7db637ce678d3f 467 SMART SM00448 4 115 3.1E-33 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_02585 5960e06dbbf0771ecf7db637ce678d3f 467 Gene3D G3DSA:3.40.50.300 127 312 6.7E-67 T 12-10-2018 M634_02585 5960e06dbbf0771ecf7db637ce678d3f 467 Pfam PF00158 Sigma-54 interaction domain 142 308 6.0E-71 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 M634_02585 5960e06dbbf0771ecf7db637ce678d3f 467 SUPERFAMILY SSF46689 382 466 2.28E-19 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_02585 5960e06dbbf0771ecf7db637ce678d3f 467 Pfam PF02954 Bacterial regulatory protein, Fis family 426 466 2.7E-16 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M634_02585 5960e06dbbf0771ecf7db637ce678d3f 467 Gene3D G3DSA:1.10.10.60 381 467 1.7E-26 T 12-10-2018 M634_02585 5960e06dbbf0771ecf7db637ce678d3f 467 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M634_02585 5960e06dbbf0771ecf7db637ce678d3f 467 SUPERFAMILY SSF52172 2 187 3.42E-43 T 12-10-2018 IPR011006 CheY-like superfamily M634_02585 5960e06dbbf0771ecf7db637ce678d3f 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 1.3E-7 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M634_02585 5960e06dbbf0771ecf7db637ce678d3f 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 467 1.3E-7 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M634_02585 5960e06dbbf0771ecf7db637ce678d3f 467 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M634_02585 5960e06dbbf0771ecf7db637ce678d3f 467 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site M634_02585 5960e06dbbf0771ecf7db637ce678d3f 467 Gene3D G3DSA:3.40.50.2300 1 124 2.7E-40 T 12-10-2018 M634_02585 5960e06dbbf0771ecf7db637ce678d3f 467 Pfam PF00072 Response regulator receiver domain 6 115 1.6E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_03290 b31e1053967a7de8f847d99ce8f56d74 100 Pfam PF00276 Ribosomal protein L23 9 95 1.7E-31 T 12-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 M634_03290 b31e1053967a7de8f847d99ce8f56d74 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.535 T 12-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 M634_03290 b31e1053967a7de8f847d99ce8f56d74 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 12-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03290 b31e1053967a7de8f847d99ce8f56d74 100 Gene3D G3DSA:3.30.70.330 1 100 5.0E-38 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily M634_03290 b31e1053967a7de8f847d99ce8f56d74 100 SUPERFAMILY SSF54189 6 97 2.88E-32 T 12-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_15410 53688fd63b46e10afbbf3d8ecb06cd75 358 PIRSF PIRSF001359 13 358 7.2E-94 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 M634_15410 53688fd63b46e10afbbf3d8ecb06cd75 358 Gene3D G3DSA:3.20.20.70 2 358 9.1E-148 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_15410 53688fd63b46e10afbbf3d8ecb06cd75 358 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 357 1.5E-180 T 12-10-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 M634_15410 53688fd63b46e10afbbf3d8ecb06cd75 358 SUPERFAMILY SSF51569 4 356 5.68E-132 T 12-10-2018 M634_15410 53688fd63b46e10afbbf3d8ecb06cd75 358 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 354 1.7E-90 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 M634_15410 53688fd63b46e10afbbf3d8ecb06cd75 358 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 100 111 - T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 M634_15410 53688fd63b46e10afbbf3d8ecb06cd75 358 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 171 182 - T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 M634_15410 53688fd63b46e10afbbf3d8ecb06cd75 358 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 356 3.3E-111 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 M634_13450 00714bac76df102ea4b05d91c85566ae 191 Pfam PF08281 Sigma-70, region 4 123 175 1.1E-9 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 M634_13450 00714bac76df102ea4b05d91c85566ae 191 Gene3D G3DSA:1.10.1740.10 13 95 2.4E-18 T 12-10-2018 M634_13450 00714bac76df102ea4b05d91c85566ae 191 Pfam PF04542 Sigma-70 region 2 33 99 2.1E-17 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 M634_13450 00714bac76df102ea4b05d91c85566ae 191 Gene3D G3DSA:1.10.10.10 118 181 1.3E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_13450 00714bac76df102ea4b05d91c85566ae 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 30 179 2.1E-22 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 M634_13450 00714bac76df102ea4b05d91c85566ae 191 SUPERFAMILY SSF88659 120 180 2.62E-12 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like M634_13450 00714bac76df102ea4b05d91c85566ae 191 SUPERFAMILY SSF88946 27 109 5.49E-21 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 M634_13450 00714bac76df102ea4b05d91c85566ae 191 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 55 86 - T 12-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 M634_01980 54e9d68dc2194d6b05c0ca53be3280b5 94 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 3 73 1.0E-4 T 12-10-2018 M634_01980 54e9d68dc2194d6b05c0ca53be3280b5 94 Pfam PF13710 ACT domain 12 73 3.1E-21 T 12-10-2018 M634_01980 54e9d68dc2194d6b05c0ca53be3280b5 94 Gene3D G3DSA:3.30.70.260 1 89 1.3E-12 T 12-10-2018 M634_01980 54e9d68dc2194d6b05c0ca53be3280b5 94 SUPERFAMILY SSF55021 3 76 1.21E-11 T 12-10-2018 M634_08320 14bfa9ccc735cc8dde99efa32ea925be 82 SUPERFAMILY SSF143034 20 81 4.97E-20 T 12-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_08320 14bfa9ccc735cc8dde99efa32ea925be 82 Pfam PF01632 Ribosomal protein L35 20 79 9.8E-21 T 12-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_08320 14bfa9ccc735cc8dde99efa32ea925be 82 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 19 81 17.907 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 M634_08320 14bfa9ccc735cc8dde99efa32ea925be 82 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 20 81 9.6E-27 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 M634_08320 14bfa9ccc735cc8dde99efa32ea925be 82 ProSitePatterns PS00936 Ribosomal protein L35 signature. 23 48 - T 12-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_08320 14bfa9ccc735cc8dde99efa32ea925be 82 PRINTS PR00064 Ribosomal protein L35 signature 21 38 9.1E-19 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 M634_08320 14bfa9ccc735cc8dde99efa32ea925be 82 PRINTS PR00064 Ribosomal protein L35 signature 53 71 9.1E-19 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 M634_08320 14bfa9ccc735cc8dde99efa32ea925be 82 PRINTS PR00064 Ribosomal protein L35 signature 38 52 9.1E-19 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 M634_08320 14bfa9ccc735cc8dde99efa32ea925be 82 Gene3D G3DSA:2.40.50.530 19 82 4.0E-18 T 12-10-2018 M634_23085 aaa6d3c06a70afb7ef0ae201de306ae1 506 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 63 500 2.7E-131 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath M634_23085 aaa6d3c06a70afb7ef0ae201de306ae1 506 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 70 500 9.7E-159 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath M634_10295 e8a0dbfbea0e8ad9b4aae07a645c5724 375 SUPERFAMILY SSF56935 39 375 1.74E-25 T 12-10-2018 M634_10295 e8a0dbfbea0e8ad9b4aae07a645c5724 375 Gene3D G3DSA:2.40.160.10 120 375 1.2E-5 T 12-10-2018 IPR023614 Porin domain superfamily M634_12920 a35e87f04835560be6a56fa715eadcba 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 7.0E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_12920 a35e87f04835560be6a56fa715eadcba 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 7.0E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_12920 a35e87f04835560be6a56fa715eadcba 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 7.0E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_12920 a35e87f04835560be6a56fa715eadcba 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 7.0E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_12920 a35e87f04835560be6a56fa715eadcba 229 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 4.7E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_12920 a35e87f04835560be6a56fa715eadcba 229 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 4.7E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_12920 a35e87f04835560be6a56fa715eadcba 229 Pfam PF00106 short chain dehydrogenase 5 189 3.2E-30 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_12920 a35e87f04835560be6a56fa715eadcba 229 SUPERFAMILY SSF51735 3 229 8.39E-78 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_12920 a35e87f04835560be6a56fa715eadcba 229 Gene3D G3DSA:3.40.50.720 2 229 5.2E-62 T 12-10-2018 M634_20065 554ae85b5df91ab6061a12f0d85c6a6f 209 Pfam PF04399 Glutaredoxin 2, C terminal domain 85 208 5.8E-34 T 12-10-2018 IPR007494 Glutaredoxin 2, C-terminal M634_20065 554ae85b5df91ab6061a12f0d85c6a6f 209 Gene3D G3DSA:3.40.30.10 8 92 4.6E-23 T 12-10-2018 M634_20065 554ae85b5df91ab6061a12f0d85c6a6f 209 TIGRFAM TIGR02182 GRXB: glutaredoxin, GrxB family 2 208 1.2E-72 T 12-10-2018 IPR011901 Glutaredoxin-2 GO:0005829|GO:0097573 M634_20065 554ae85b5df91ab6061a12f0d85c6a6f 209 SUPERFAMILY SSF47616 77 208 5.03E-40 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily M634_20065 554ae85b5df91ab6061a12f0d85c6a6f 209 SUPERFAMILY SSF52833 1 77 6.19E-15 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M634_20065 554ae85b5df91ab6061a12f0d85c6a6f 209 Gene3D G3DSA:1.20.1050.10 93 209 3.9E-21 T 12-10-2018 M634_20065 554ae85b5df91ab6061a12f0d85c6a6f 209 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 74 3.6E-12 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 M634_18560 a51251531d3ab08958f076991ff49b5c 214 SUPERFAMILY SSF56925 23 214 6.28E-34 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel M634_18560 a51251531d3ab08958f076991ff49b5c 214 Pfam PF03922 OmpW family 24 214 3.3E-72 T 12-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 M634_18560 a51251531d3ab08958f076991ff49b5c 214 Gene3D G3DSA:2.40.160.20 22 214 2.2E-83 T 12-10-2018 M634_14860 6546fa979e1da1fc69d387a25b8d4279 112 SUPERFAMILY SSF54913 1 112 2.8E-45 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta M634_14860 6546fa979e1da1fc69d387a25b8d4279 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 12-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 M634_14860 6546fa979e1da1fc69d387a25b8d4279 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 8.1E-44 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 M634_14860 6546fa979e1da1fc69d387a25b8d4279 112 PRINTS PR00340 P-II protein signature 83 103 6.8E-41 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 M634_14860 6546fa979e1da1fc69d387a25b8d4279 112 PRINTS PR00340 P-II protein signature 23 41 6.8E-41 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 M634_14860 6546fa979e1da1fc69d387a25b8d4279 112 PRINTS PR00340 P-II protein signature 2 17 6.8E-41 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 M634_14860 6546fa979e1da1fc69d387a25b8d4279 112 PRINTS PR00340 P-II protein signature 52 75 6.8E-41 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 M634_14860 6546fa979e1da1fc69d387a25b8d4279 112 SMART SM00938 4 105 2.3E-68 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 M634_14860 6546fa979e1da1fc69d387a25b8d4279 112 PIRSF PIRSF039144 1 112 1.1E-55 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 M634_14860 6546fa979e1da1fc69d387a25b8d4279 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 12-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 M634_14860 6546fa979e1da1fc69d387a25b8d4279 112 Gene3D G3DSA:3.30.70.120 1 112 1.2E-46 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal M634_02760 760ad6ea0e7f7e22e908885f9d16627e 163 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 M634_02760 760ad6ea0e7f7e22e908885f9d16627e 163 PIRSF PIRSF006092 2 158 1.1E-43 T 12-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 M634_02760 760ad6ea0e7f7e22e908885f9d16627e 163 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 2 158 1.6E-71 T 12-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 M634_02760 760ad6ea0e7f7e22e908885f9d16627e 163 Gene3D G3DSA:1.10.287.180 1 76 7.5E-28 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 M634_02760 760ad6ea0e7f7e22e908885f9d16627e 163 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 6.7E-23 T 12-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 M634_02760 760ad6ea0e7f7e22e908885f9d16627e 163 SUPERFAMILY SSF46557 3 78 1.44E-25 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 M634_02760 760ad6ea0e7f7e22e908885f9d16627e 163 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 157 49.637 T 12-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 M634_02760 760ad6ea0e7f7e22e908885f9d16627e 163 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 156 1.0E-22 T 12-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 M634_02760 760ad6ea0e7f7e22e908885f9d16627e 163 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 M634_02760 760ad6ea0e7f7e22e908885f9d16627e 163 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 26.016 T 12-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 M634_02760 760ad6ea0e7f7e22e908885f9d16627e 163 Gene3D G3DSA:3.10.50.30 77 159 1.2E-30 T 12-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 M634_02760 760ad6ea0e7f7e22e908885f9d16627e 163 SUPERFAMILY SSF54534 80 156 1.02E-18 T 12-10-2018 M634_21630 6a97ceae26eb9b3bb559c3884724ca34 1221 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 274 478 1.1E-11 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M634_21630 6a97ceae26eb9b3bb559c3884724ca34 1221 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 780 889 1.8E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_21630 6a97ceae26eb9b3bb559c3884724ca34 1221 Gene3D G3DSA:3.40.190.10 354 444 4.0E-21 T 12-10-2018 M634_21630 6a97ceae26eb9b3bb559c3884724ca34 1221 Gene3D G3DSA:3.40.190.10 120 210 2.9E-24 T 12-10-2018 M634_21630 6a97ceae26eb9b3bb559c3884724ca34 1221 SMART SM00387 779 890 1.4E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_21630 6a97ceae26eb9b3bb559c3884724ca34 1221 Pfam PF00512 His Kinase A (phospho-acceptor) domain 668 732 4.0E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_21630 6a97ceae26eb9b3bb559c3884724ca34 1221 PRINTS PR00344 Bacterial sensor protein C-terminal signature 815 829 1.1E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_21630 6a97ceae26eb9b3bb559c3884724ca34 1221 PRINTS PR00344 Bacterial sensor protein C-terminal signature 874 887 1.1E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_21630 6a97ceae26eb9b3bb559c3884724ca34 1221 PRINTS PR00344 Bacterial sensor protein C-terminal signature 850 868 1.1E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_21630 6a97ceae26eb9b3bb559c3884724ca34 1221 Gene3D G3DSA:3.40.190.10 35 233 2.9E-24 T 12-10-2018 M634_21630 6a97ceae26eb9b3bb559c3884724ca34 1221 SUPERFAMILY SSF47384 652 733 3.73E-18 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M634_21630 6a97ceae26eb9b3bb559c3884724ca34 1221 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 234 1.7E-22 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M634_21630 6a97ceae26eb9b3bb559c3884724ca34 1221 Gene3D G3DSA:1.10.287.130 636 730 2.3E-21 T 12-10-2018 M634_21630 6a97ceae26eb9b3bb559c3884724ca34 1221 Gene3D G3DSA:1.20.120.160 1118 1218 7.7E-8 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 M634_21630 6a97ceae26eb9b3bb559c3884724ca34 1221 Gene3D G3DSA:3.30.565.10 731 893 1.7E-41 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_21630 6a97ceae26eb9b3bb559c3884724ca34 1221 SUPERFAMILY SSF53850 269 481 7.82E-16 T 12-10-2018 M634_21630 6a97ceae26eb9b3bb559c3884724ca34 1221 SMART SM00388 667 732 2.3E-17 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_21630 6a97ceae26eb9b3bb559c3884724ca34 1221 SUPERFAMILY SSF52172 995 1116 1.57E-29 T 12-10-2018 IPR011006 CheY-like superfamily M634_21630 6a97ceae26eb9b3bb559c3884724ca34 1221 Pfam PF00072 Response regulator receiver domain 996 1106 3.2E-19 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_21630 6a97ceae26eb9b3bb559c3884724ca34 1221 Gene3D G3DSA:3.40.190.10 267 478 4.0E-21 T 12-10-2018 M634_21630 6a97ceae26eb9b3bb559c3884724ca34 1221 SMART SM00448 994 1107 5.1E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_21630 6a97ceae26eb9b3bb559c3884724ca34 1221 SUPERFAMILY SSF55874 721 892 3.67E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_21630 6a97ceae26eb9b3bb559c3884724ca34 1221 SMART SM00062 33 244 1.4E-9 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M634_21630 6a97ceae26eb9b3bb559c3884724ca34 1221 SMART SM00062 267 481 2.8E-4 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M634_21630 6a97ceae26eb9b3bb559c3884724ca34 1221 SUPERFAMILY SSF53850 49 234 7.71E-26 T 12-10-2018 M634_21630 6a97ceae26eb9b3bb559c3884724ca34 1221 SUPERFAMILY SSF47226 1119 1210 8.51E-11 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 M634_21630 6a97ceae26eb9b3bb559c3884724ca34 1221 Gene3D G3DSA:3.40.50.2300 994 1117 1.1E-28 T 12-10-2018 M634_01255 970f31dc1953091b171244b1201e7f08 206 Pfam PF00717 Peptidase S24-like 118 183 1.8E-15 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C M634_01255 970f31dc1953091b171244b1201e7f08 206 Hamap MF_00015 LexA repressor [lexA]. 3 203 31.634 T 12-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 M634_01255 970f31dc1953091b171244b1201e7f08 206 SUPERFAMILY SSF51306 79 202 3.49E-36 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily M634_01255 970f31dc1953091b171244b1201e7f08 206 TIGRFAM TIGR00498 lexA: repressor LexA 1 203 5.6E-81 T 12-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 M634_01255 970f31dc1953091b171244b1201e7f08 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 115 125 1.5E-13 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 M634_01255 970f31dc1953091b171244b1201e7f08 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 154 166 1.5E-13 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 M634_01255 970f31dc1953091b171244b1201e7f08 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 126 137 1.5E-13 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 M634_01255 970f31dc1953091b171244b1201e7f08 206 Gene3D G3DSA:2.10.109.10 84 206 6.6E-44 T 12-10-2018 M634_01255 970f31dc1953091b171244b1201e7f08 206 Gene3D G3DSA:1.10.10.10 1 69 1.2E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_01255 970f31dc1953091b171244b1201e7f08 206 Pfam PF01726 LexA DNA binding domain 1 65 4.4E-29 T 12-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 M634_01255 970f31dc1953091b171244b1201e7f08 206 SUPERFAMILY SSF46785 3 69 3.14E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_04975 851240ac9047ed97ea04266804cf1d95 517 Gene3D G3DSA:3.40.50.880 6 201 1.2E-54 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M634_04975 851240ac9047ed97ea04266804cf1d95 517 PRINTS PR00097 Anthranilate synthase component II signature 54 63 3.5E-6 T 12-10-2018 M634_04975 851240ac9047ed97ea04266804cf1d95 517 PRINTS PR00097 Anthranilate synthase component II signature 81 92 3.5E-6 T 12-10-2018 M634_04975 851240ac9047ed97ea04266804cf1d95 517 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.5E-6 T 12-10-2018 M634_04975 851240ac9047ed97ea04266804cf1d95 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 2.8E-7 T 12-10-2018 M634_04975 851240ac9047ed97ea04266804cf1d95 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 2.8E-7 T 12-10-2018 M634_04975 851240ac9047ed97ea04266804cf1d95 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 2.8E-7 T 12-10-2018 M634_04975 851240ac9047ed97ea04266804cf1d95 517 Gene3D G3DSA:3.30.300.10 398 517 8.5E-51 T 12-10-2018 M634_04975 851240ac9047ed97ea04266804cf1d95 517 Pfam PF02540 NAD synthase 212 285 1.2E-7 T 12-10-2018 IPR022310 NAD/GMP synthase M634_04975 851240ac9047ed97ea04266804cf1d95 517 Gene3D G3DSA:3.40.50.620 202 397 5.5E-75 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M634_04975 851240ac9047ed97ea04266804cf1d95 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 4.0E-6 T 12-10-2018 M634_04975 851240ac9047ed97ea04266804cf1d95 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 4.0E-6 T 12-10-2018 M634_04975 851240ac9047ed97ea04266804cf1d95 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 4.0E-6 T 12-10-2018 M634_04975 851240ac9047ed97ea04266804cf1d95 517 SUPERFAMILY SSF52317 5 196 1.19E-57 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M634_04975 851240ac9047ed97ea04266804cf1d95 517 SUPERFAMILY SSF54810 397 517 6.93E-51 T 12-10-2018 M634_04975 851240ac9047ed97ea04266804cf1d95 517 SUPERFAMILY SSF52402 189 412 4.85E-58 T 12-10-2018 M634_04975 851240ac9047ed97ea04266804cf1d95 517 Pfam PF00117 Glutamine amidotransferase class-I 12 191 1.0E-42 T 12-10-2018 IPR017926 Glutamine amidotransferase M634_04975 851240ac9047ed97ea04266804cf1d95 517 Pfam PF00958 GMP synthase C terminal domain 425 516 1.2E-43 T 12-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 M634_04975 851240ac9047ed97ea04266804cf1d95 517 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 205 517 5.5E-156 T 12-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 M634_04975 851240ac9047ed97ea04266804cf1d95 517 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 517 56.511 T 12-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 M634_04975 851240ac9047ed97ea04266804cf1d95 517 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 197 1.8E-84 T 12-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 M634_00920 40965dab8c498ca5e9d29d2aee1ddd0e 295 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 293 1.3E-105 T 12-10-2018 M634_00920 40965dab8c498ca5e9d29d2aee1ddd0e 295 Gene3D G3DSA:3.40.50.150 102 294 2.9E-56 T 12-10-2018 M634_00920 40965dab8c498ca5e9d29d2aee1ddd0e 295 PIRSF PIRSF000401 1 295 9.8E-101 T 12-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 M634_00920 40965dab8c498ca5e9d29d2aee1ddd0e 295 SUPERFAMILY SSF53335 43 274 2.22E-45 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_00920 40965dab8c498ca5e9d29d2aee1ddd0e 295 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 287 7.5E-109 T 12-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 M634_00920 40965dab8c498ca5e9d29d2aee1ddd0e 295 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 293 34.04 T 12-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 M634_15260 8ed8b555f90b42e5fe1d18667916c5a7 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 471 1.1E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_15260 8ed8b555f90b42e5fe1d18667916c5a7 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 457 1.1E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_15260 8ed8b555f90b42e5fe1d18667916c5a7 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 496 1.1E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_15260 8ed8b555f90b42e5fe1d18667916c5a7 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 515 1.1E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_15260 8ed8b555f90b42e5fe1d18667916c5a7 932 Gene3D G3DSA:1.20.120.160 819 932 1.3E-30 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 M634_15260 8ed8b555f90b42e5fe1d18667916c5a7 932 Gene3D G3DSA:1.20.1480.50 161 270 1.4E-7 T 12-10-2018 M634_15260 8ed8b555f90b42e5fe1d18667916c5a7 932 SUPERFAMILY SSF55874 344 516 1.1E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_15260 8ed8b555f90b42e5fe1d18667916c5a7 932 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 175 3.9E-53 T 12-10-2018 IPR019247 Histidine kinase BarA, N-terminal M634_15260 8ed8b555f90b42e5fe1d18667916c5a7 932 SMART SM00388 290 355 2.9E-24 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_15260 8ed8b555f90b42e5fe1d18667916c5a7 932 Pfam PF01627 Hpt domain 840 919 6.2E-11 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 M634_15260 8ed8b555f90b42e5fe1d18667916c5a7 932 SUPERFAMILY SSF52172 533 644 2.64E-8 T 12-10-2018 IPR011006 CheY-like superfamily M634_15260 8ed8b555f90b42e5fe1d18667916c5a7 932 Gene3D G3DSA:3.30.565.10 357 521 1.7E-51 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_15260 8ed8b555f90b42e5fe1d18667916c5a7 932 SUPERFAMILY SSF47384 275 356 9.61E-23 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M634_15260 8ed8b555f90b42e5fe1d18667916c5a7 932 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 402 517 6.3E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_15260 8ed8b555f90b42e5fe1d18667916c5a7 932 SMART SM00448 668 781 7.7E-36 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_15260 8ed8b555f90b42e5fe1d18667916c5a7 932 SMART SM00304 198 250 3.1E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_15260 8ed8b555f90b42e5fe1d18667916c5a7 932 Gene3D G3DSA:1.10.287.130 276 356 6.6E-27 T 12-10-2018 M634_15260 8ed8b555f90b42e5fe1d18667916c5a7 932 SUPERFAMILY SSF158472 200 247 1.06E-6 T 12-10-2018 M634_15260 8ed8b555f90b42e5fe1d18667916c5a7 932 SMART SM00387 402 518 3.7E-38 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_15260 8ed8b555f90b42e5fe1d18667916c5a7 932 Pfam PF00512 His Kinase A (phospho-acceptor) domain 291 355 3.5E-20 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_15260 8ed8b555f90b42e5fe1d18667916c5a7 932 SMART SM00073 829 927 1.3E-9 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 M634_15260 8ed8b555f90b42e5fe1d18667916c5a7 932 SUPERFAMILY SSF47226 764 919 2.75E-22 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 M634_15260 8ed8b555f90b42e5fe1d18667916c5a7 932 Pfam PF00072 Response regulator receiver domain 670 780 9.9E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_15260 8ed8b555f90b42e5fe1d18667916c5a7 932 Gene3D G3DSA:3.40.50.2300 656 790 2.4E-39 T 12-10-2018 M634_15260 8ed8b555f90b42e5fe1d18667916c5a7 932 SUPERFAMILY SSF52172 667 784 1.24E-35 T 12-10-2018 IPR011006 CheY-like superfamily M634_16035 30eb424f554d696f649ced2dacb91e05 407 Gene3D G3DSA:1.20.81.30 62 176 6.8E-31 T 12-10-2018 M634_16035 30eb424f554d696f649ced2dacb91e05 407 Gene3D G3DSA:1.20.81.30 257 370 1.7E-28 T 12-10-2018 M634_16035 30eb424f554d696f649ced2dacb91e05 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 3.9E-9 T 12-10-2018 IPR003004 GspF/PilC family M634_16035 30eb424f554d696f649ced2dacb91e05 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 3.9E-9 T 12-10-2018 IPR003004 GspF/PilC family M634_16035 30eb424f554d696f649ced2dacb91e05 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 3.9E-9 T 12-10-2018 IPR003004 GspF/PilC family M634_16035 30eb424f554d696f649ced2dacb91e05 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 3.9E-9 T 12-10-2018 IPR003004 GspF/PilC family M634_16035 30eb424f554d696f649ced2dacb91e05 407 Pfam PF00482 Type II secretion system (T2SS), protein F 71 194 4.0E-30 T 12-10-2018 IPR018076 Type II secretion system F domain M634_16035 30eb424f554d696f649ced2dacb91e05 407 Pfam PF00482 Type II secretion system (T2SS), protein F 274 396 1.0E-26 T 12-10-2018 IPR018076 Type II secretion system F domain M634_18920 c0ddc1f8c7b6e95463c044607c7b58b6 289 SUPERFAMILY SSF53807 26 262 1.62E-18 T 12-10-2018 M634_18920 c0ddc1f8c7b6e95463c044607c7b58b6 289 Gene3D G3DSA:3.40.50.1980 70 188 2.7E-6 T 12-10-2018 M634_24320 af17961a2a16afefc7c50ecf6f6db7d9 176 PIRSF PIRSF004633 1 176 2.6E-76 T 12-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain M634_24320 af17961a2a16afefc7c50ecf6f6db7d9 176 TIGRFAM TIGR04110 heme_HutZ: heme utilization protein HutZ 4 171 1.8E-89 T 12-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain M634_24320 af17961a2a16afefc7c50ecf6f6db7d9 176 Gene3D G3DSA:2.30.110.10 12 176 4.1E-54 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 M634_24320 af17961a2a16afefc7c50ecf6f6db7d9 176 SUPERFAMILY SSF50475 12 162 5.43E-35 T 12-10-2018 M634_24320 af17961a2a16afefc7c50ecf6f6db7d9 176 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 15 105 7.7E-18 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 M634_24410 a82c06718b441f736da371eefa4b6fc3 605 Gene3D G3DSA:3.40.50.80 381 507 2.9E-32 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M634_24410 a82c06718b441f736da371eefa4b6fc3 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 478 486 2.5E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M634_24410 a82c06718b441f736da371eefa4b6fc3 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 388 407 2.5E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M634_24410 a82c06718b441f736da371eefa4b6fc3 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 309 319 2.5E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M634_24410 a82c06718b441f736da371eefa4b6fc3 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 328 335 2.5E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M634_24410 a82c06718b441f736da371eefa4b6fc3 605 PRINTS PR00406 Cytochrome B5 reductase signature 478 486 2.6E-8 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 M634_24410 a82c06718b441f736da371eefa4b6fc3 605 PRINTS PR00406 Cytochrome B5 reductase signature 328 335 2.6E-8 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 M634_24410 a82c06718b441f736da371eefa4b6fc3 605 PRINTS PR00406 Cytochrome B5 reductase signature 388 407 2.6E-8 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 M634_24410 a82c06718b441f736da371eefa4b6fc3 605 PRINTS PR00406 Cytochrome B5 reductase signature 425 436 2.6E-8 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 M634_24410 a82c06718b441f736da371eefa4b6fc3 605 PRINTS PR00406 Cytochrome B5 reductase signature 365 379 2.6E-8 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 M634_24410 a82c06718b441f736da371eefa4b6fc3 605 SUPERFAMILY SSF141673 6 133 1.03E-29 T 12-10-2018 M634_24410 a82c06718b441f736da371eefa4b6fc3 605 SUPERFAMILY SSF54292 501 604 2.88E-26 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 M634_24410 a82c06718b441f736da371eefa4b6fc3 605 Pfam PF03476 MOSC N-terminal beta barrel domain 5 118 4.9E-30 T 12-10-2018 IPR005303 MOSC, N-terminal beta barrel KEGG: 00790+2.8.1.9|MetaCyc: PWY-5963 M634_24410 a82c06718b441f736da371eefa4b6fc3 605 SUPERFAMILY SSF52343 368 508 1.7E-36 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M634_24410 a82c06718b441f736da371eefa4b6fc3 605 Gene3D G3DSA:2.40.30.10 279 378 1.2E-24 T 12-10-2018 M634_24410 a82c06718b441f736da371eefa4b6fc3 605 Pfam PF00970 Oxidoreductase FAD-binding domain 284 378 6.3E-15 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 M634_24410 a82c06718b441f736da371eefa4b6fc3 605 Pfam PF00175 Oxidoreductase NAD-binding domain 389 492 3.4E-18 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 M634_24410 a82c06718b441f736da371eefa4b6fc3 605 Gene3D G3DSA:3.10.20.30 508 605 3.0E-21 T 12-10-2018 IPR012675 Beta-grasp domain superfamily M634_24410 a82c06718b441f736da371eefa4b6fc3 605 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 555 563 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 M634_24410 a82c06718b441f736da371eefa4b6fc3 605 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 531 597 3.0E-11 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 M634_24410 a82c06718b441f736da371eefa4b6fc3 605 Pfam PF03473 MOSC domain 138 262 1.4E-29 T 12-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 M634_24410 a82c06718b441f736da371eefa4b6fc3 605 SUPERFAMILY SSF50800 5 264 3.71E-14 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily M634_24410 a82c06718b441f736da371eefa4b6fc3 605 SUPERFAMILY SSF63380 274 380 1.09E-25 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel M634_16570 95ac20a06a6d90a748a2fb5242e851b4 292 PIRSF PIRSF000103 1 292 1.0E-77 T 12-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 M634_16570 95ac20a06a6d90a748a2fb5242e851b4 292 Gene3D G3DSA:3.40.50.720 1 166 5.1E-52 T 12-10-2018 M634_16570 95ac20a06a6d90a748a2fb5242e851b4 292 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 168 287 6.9E-32 T 12-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 M634_16570 95ac20a06a6d90a748a2fb5242e851b4 292 SUPERFAMILY SSF51735 4 166 4.68E-54 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_16570 95ac20a06a6d90a748a2fb5242e851b4 292 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 6 163 6.6E-50 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 M634_16570 95ac20a06a6d90a748a2fb5242e851b4 292 Gene3D G3DSA:1.10.1040.10 167 292 2.8E-38 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 M634_16570 95ac20a06a6d90a748a2fb5242e851b4 292 SUPERFAMILY SSF48179 167 290 1.12E-38 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 M634_21885 41dad3a090b80d1f7864ba9d3becfdc4 342 Gene3D G3DSA:2.40.230.10 76 341 7.2E-87 T 12-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 M634_21885 41dad3a090b80d1f7864ba9d3becfdc4 342 SUPERFAMILY SSF56931 78 341 2.48E-91 T 12-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 M634_21885 41dad3a090b80d1f7864ba9d3becfdc4 342 Pfam PF02253 Phospholipase A1 78 338 3.5E-96 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 M634_21885 41dad3a090b80d1f7864ba9d3becfdc4 342 PRINTS PR01486 Bacterial phospholipase A1 protein signature 311 331 7.6E-28 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 M634_21885 41dad3a090b80d1f7864ba9d3becfdc4 342 PRINTS PR01486 Bacterial phospholipase A1 protein signature 256 274 7.6E-28 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 M634_21885 41dad3a090b80d1f7864ba9d3becfdc4 342 PRINTS PR01486 Bacterial phospholipase A1 protein signature 124 141 7.6E-28 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 M634_21885 41dad3a090b80d1f7864ba9d3becfdc4 342 PRINTS PR01486 Bacterial phospholipase A1 protein signature 170 189 7.6E-28 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 M634_21885 41dad3a090b80d1f7864ba9d3becfdc4 342 PRINTS PR01486 Bacterial phospholipase A1 protein signature 289 306 7.6E-28 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 M634_14515 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Hamap MF_00054_B Elongation factor G [fusA]. 3 689 102.045 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 M634_14515 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 SMART SM00889 478 596 9.9E-59 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 M634_14515 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Pfam PF03764 Elongation factor G, domain IV 477 595 2.5E-41 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 M634_14515 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 SUPERFAMILY SSF54980 402 479 5.4E-21 T 12-10-2018 IPR035647 EF-G domain III/V-like M634_14515 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Pfam PF14492 Elongation Factor G, domain II 402 475 2.3E-29 T 12-10-2018 M634_14515 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Pfam PF00679 Elongation factor G C-terminus 598 684 1.7E-29 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like M634_14515 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 174 9.9E-24 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 M634_14515 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 SUPERFAMILY SSF54980 601 690 1.76E-29 T 12-10-2018 IPR035647 EF-G domain III/V-like M634_14515 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 PRINTS PR00315 GTP-binding elongation factor signature 9 22 1.1E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_14515 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.1E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_14515 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.1E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_14515 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.1E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_14515 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Gene3D G3DSA:2.40.30.10 292 414 1.5E-44 T 12-10-2018 M634_14515 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 690 1.7E-288 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 M634_14515 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 SUPERFAMILY SSF50447 262 400 2.05E-32 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily M634_14515 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Gene3D G3DSA:3.30.70.870 431 481 5.8E-21 T 12-10-2018 M634_14515 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 SMART SM00838 598 685 3.7E-47 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like M634_14515 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site M634_14515 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Pfam PF00009 Elongation factor Tu GTP binding domain 6 279 1.1E-59 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_14515 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Gene3D G3DSA:3.40.50.300 1 290 1.2E-99 T 12-10-2018 M634_14515 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 SUPERFAMILY SSF52540 3 279 4.29E-98 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_14515 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Gene3D G3DSA:3.30.230.10 482 685 6.2E-82 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M634_14515 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Gene3D G3DSA:3.30.70.240 602 672 6.2E-82 T 12-10-2018 M634_14515 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Pfam PF03144 Elongation factor Tu domain 2 322 389 3.1E-17 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 M634_14515 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 SUPERFAMILY SSF54211 477 596 2.38E-38 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M634_23185 138f432ac98d6d39de5e1a318e622383 193 Pfam PF03861 ANTAR domain 134 186 3.1E-16 T 12-10-2018 IPR005561 ANTAR domain GO:0003723 M634_23185 138f432ac98d6d39de5e1a318e622383 193 Gene3D G3DSA:1.10.10.10 133 192 4.3E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_23185 138f432ac98d6d39de5e1a318e622383 193 SMART SM01012 131 186 5.1E-17 T 12-10-2018 IPR005561 ANTAR domain GO:0003723 M634_23185 138f432ac98d6d39de5e1a318e622383 193 SUPERFAMILY SSF52172 2 186 2.19E-24 T 12-10-2018 IPR011006 CheY-like superfamily M634_03070 9c3f0e9b3ea3cc798b2bc1f7c2f5fc4c 732 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 33 717 4.3E-255 T 12-10-2018 IPR010344 Exopolysaccharide biosynthesis protein YbjH M634_20420 9978b4bc89b87a9c8e12300325cbe324 104 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 1 95 23.99 T 12-10-2018 IPR007458 Protein of unknown function DUF496 M634_20420 9978b4bc89b87a9c8e12300325cbe324 104 PIRSF PIRSF028773 1 104 8.7E-46 T 12-10-2018 IPR007458 Protein of unknown function DUF496 M634_20420 9978b4bc89b87a9c8e12300325cbe324 104 Pfam PF04363 Protein of unknown function (DUF496) 1 92 4.7E-42 T 12-10-2018 IPR007458 Protein of unknown function DUF496 M634_20420 9978b4bc89b87a9c8e12300325cbe324 104 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 1 92 4.0E-45 T 12-10-2018 IPR007458 Protein of unknown function DUF496 M634_24225 45ebe61dd29d521bab33d5bfe6a725ab 449 SUPERFAMILY SSF51011 397 446 2.66E-5 T 12-10-2018 M634_24225 45ebe61dd29d521bab33d5bfe6a725ab 449 Gene3D G3DSA:3.20.20.80 9 379 1.4E-78 T 12-10-2018 M634_24225 45ebe61dd29d521bab33d5bfe6a725ab 449 SMART SM00642 13 374 2.9E-21 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 M634_24225 45ebe61dd29d521bab33d5bfe6a725ab 449 PRINTS PR00110 Alpha-amylase signature 230 248 3.7E-16 T 12-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 M634_24225 45ebe61dd29d521bab33d5bfe6a725ab 449 PRINTS PR00110 Alpha-amylase signature 55 72 3.7E-16 T 12-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 M634_24225 45ebe61dd29d521bab33d5bfe6a725ab 449 PRINTS PR00110 Alpha-amylase signature 201 212 3.7E-16 T 12-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 M634_24225 45ebe61dd29d521bab33d5bfe6a725ab 449 PRINTS PR00110 Alpha-amylase signature 296 308 3.7E-16 T 12-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 M634_24225 45ebe61dd29d521bab33d5bfe6a725ab 449 PRINTS PR00110 Alpha-amylase signature 88 99 3.7E-16 T 12-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 M634_24225 45ebe61dd29d521bab33d5bfe6a725ab 449 Pfam PF00128 Alpha amylase, catalytic domain 26 239 4.7E-16 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 M634_24225 45ebe61dd29d521bab33d5bfe6a725ab 449 SUPERFAMILY SSF51445 12 356 1.75E-61 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M634_00270 671bcc07ede96597ef2f60a6920437db 263 TIGRFAM TIGR00761 argB: acetylglutamate kinase 9 234 1.1E-62 T 12-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 M634_00270 671bcc07ede96597ef2f60a6920437db 263 Hamap MF_00082 Acetylglutamate kinase [argB]. 6 255 42.366 T 12-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 M634_00270 671bcc07ede96597ef2f60a6920437db 263 Gene3D G3DSA:3.40.1160.10 4 260 5.7E-64 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily M634_00270 671bcc07ede96597ef2f60a6920437db 263 SUPERFAMILY SSF53633 9 261 6.41E-58 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily M634_00270 671bcc07ede96597ef2f60a6920437db 263 Pfam PF00696 Amino acid kinase family 9 238 1.1E-35 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 M634_00270 671bcc07ede96597ef2f60a6920437db 263 PIRSF PIRSF000728 1 263 1.9E-69 T 12-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 M634_20070 2eea3b6dc8fd7933ebfdde9c38a04bfe 311 Pfam PF03466 LysR substrate binding domain 89 301 1.9E-41 T 12-10-2018 IPR005119 LysR, substrate-binding M634_20070 2eea3b6dc8fd7933ebfdde9c38a04bfe 311 Gene3D G3DSA:1.10.10.10 3 88 1.8E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_20070 2eea3b6dc8fd7933ebfdde9c38a04bfe 311 SUPERFAMILY SSF46785 4 111 9.58E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_20070 2eea3b6dc8fd7933ebfdde9c38a04bfe 311 SUPERFAMILY SSF53850 88 304 7.0E-39 T 12-10-2018 M634_20070 2eea3b6dc8fd7933ebfdde9c38a04bfe 311 Gene3D G3DSA:3.40.190.10 163 272 4.2E-64 T 12-10-2018 M634_20070 2eea3b6dc8fd7933ebfdde9c38a04bfe 311 Gene3D G3DSA:3.40.190.10 91 299 4.2E-64 T 12-10-2018 M634_20070 2eea3b6dc8fd7933ebfdde9c38a04bfe 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 4.3E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_01605 102826413a27fe477aaf26e67316e7da 86 Pfam PF10048 Predicted integral membrane protein (DUF2282) 33 82 2.1E-23 T 12-10-2018 IPR018740 Protein of unknown function DUF2282, integral membrane M634_14980 87cd2f2138e73195e2c05de5035bc4c9 183 SMART SM00644 18 169 8.1E-55 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 M634_14980 87cd2f2138e73195e2c05de5035bc4c9 183 Gene3D G3DSA:3.40.80.10 4 183 1.3E-55 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 M634_14980 87cd2f2138e73195e2c05de5035bc4c9 183 SUPERFAMILY SSF55846 4 182 2.22E-65 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 M634_14980 87cd2f2138e73195e2c05de5035bc4c9 183 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 29 169 3.8E-28 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 M634_04545 fb6532794965a2fb0506f9c480d0ed99 942 Pfam PF08264 Anticodon-binding domain of tRNA 690 844 1.4E-26 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 M634_04545 fb6532794965a2fb0506f9c480d0ed99 942 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 645 2.1E-219 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 M634_04545 fb6532794965a2fb0506f9c480d0ed99 942 Pfam PF06827 Zinc finger found in FPG and IleRS 903 930 3.9E-6 T 12-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 M634_04545 fb6532794965a2fb0506f9c480d0ed99 942 SUPERFAMILY SSF52374 4 652 5.36E-138 T 12-10-2018 M634_04545 fb6532794965a2fb0506f9c480d0ed99 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 5.1E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 M634_04545 fb6532794965a2fb0506f9c480d0ed99 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 241 264 5.1E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 M634_04545 fb6532794965a2fb0506f9c480d0ed99 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 406 421 5.1E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 M634_04545 fb6532794965a2fb0506f9c480d0ed99 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 531 544 5.1E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 M634_04545 fb6532794965a2fb0506f9c480d0ed99 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 566 575 5.1E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 M634_04545 fb6532794965a2fb0506f9c480d0ed99 942 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 848 9.5E-294 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 M634_04545 fb6532794965a2fb0506f9c480d0ed99 942 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 933 21.492 T 12-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 M634_04545 fb6532794965a2fb0506f9c480d0ed99 942 SUPERFAMILY SSF47323 657 933 4.67E-75 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 M634_04545 fb6532794965a2fb0506f9c480d0ed99 942 SUPERFAMILY SSF50677 203 408 5.76E-55 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 M634_04545 fb6532794965a2fb0506f9c480d0ed99 942 Gene3D G3DSA:1.10.730.20 645 934 1.3E-85 T 12-10-2018 M634_04545 fb6532794965a2fb0506f9c480d0ed99 942 Gene3D G3DSA:3.40.50.620 25 634 2.0E-241 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M634_04545 fb6532794965a2fb0506f9c480d0ed99 942 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 M634_04545 fb6532794965a2fb0506f9c480d0ed99 942 Gene3D G3DSA:3.90.740.10 195 413 2.0E-241 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 M634_15910 c20af86bcf3083855e9667ad83bef650 451 SUPERFAMILY SSF158791 12 136 1.31E-30 T 12-10-2018 M634_15910 c20af86bcf3083855e9667ad83bef650 451 Gene3D G3DSA:3.10.580.10 135 262 2.4E-37 T 12-10-2018 M634_15910 c20af86bcf3083855e9667ad83bef650 451 SMART SM00116 212 258 0.0013 T 12-10-2018 IPR000644 CBS domain M634_15910 c20af86bcf3083855e9667ad83bef650 451 Gene3D G3DSA:1.25.60.10 8 134 1.6E-20 T 12-10-2018 IPR038076 MgtE, N-terminal domain superfamily M634_15910 c20af86bcf3083855e9667ad83bef650 451 Pfam PF01769 Divalent cation transporter 323 444 4.3E-23 T 12-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 M634_15910 c20af86bcf3083855e9667ad83bef650 451 SUPERFAMILY SSF161093 280 450 3.53E-44 T 12-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 M634_15910 c20af86bcf3083855e9667ad83bef650 451 Pfam PF03448 MgtE intracellular N domain 36 137 9.0E-27 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain M634_15910 c20af86bcf3083855e9667ad83bef650 451 Gene3D G3DSA:1.10.357.20 277 451 1.5E-45 T 12-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain M634_15910 c20af86bcf3083855e9667ad83bef650 451 TIGRFAM TIGR00400 mgtE: magnesium transporter 20 451 6.5E-87 T 12-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 M634_15910 c20af86bcf3083855e9667ad83bef650 451 SMART SM00924 36 139 3.0E-37 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain M634_15910 c20af86bcf3083855e9667ad83bef650 451 Pfam PF00571 CBS domain 140 195 6.9E-4 T 12-10-2018 IPR000644 CBS domain M634_15910 c20af86bcf3083855e9667ad83bef650 451 Pfam PF00571 CBS domain 214 257 2.4E-4 T 12-10-2018 IPR000644 CBS domain M634_15910 c20af86bcf3083855e9667ad83bef650 451 SUPERFAMILY SSF54631 138 278 2.27E-26 T 12-10-2018 M634_21270 acd1aa742422848df7ce3bbdb7e6bd65 285 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 3.5E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_21270 acd1aa742422848df7ce3bbdb7e6bd65 285 SUPERFAMILY SSF53850 115 272 1.59E-28 T 12-10-2018 M634_21270 acd1aa742422848df7ce3bbdb7e6bd65 285 Gene3D G3DSA:3.40.190.10 148 246 6.9E-28 T 12-10-2018 M634_21270 acd1aa742422848df7ce3bbdb7e6bd65 285 Gene3D G3DSA:3.40.190.10 110 270 6.9E-28 T 12-10-2018 M634_21270 acd1aa742422848df7ce3bbdb7e6bd65 285 Pfam PF03466 LysR substrate binding domain 115 275 3.9E-15 T 12-10-2018 IPR005119 LysR, substrate-binding M634_21270 acd1aa742422848df7ce3bbdb7e6bd65 285 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.8E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_21270 acd1aa742422848df7ce3bbdb7e6bd65 285 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.8E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_21270 acd1aa742422848df7ce3bbdb7e6bd65 285 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.8E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_21270 acd1aa742422848df7ce3bbdb7e6bd65 285 Gene3D G3DSA:1.10.10.10 1 83 2.2E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_21270 acd1aa742422848df7ce3bbdb7e6bd65 285 SUPERFAMILY SSF46785 1 80 6.67E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_10510 d5869f5f253b9846ed3eb1fa7cacc3b8 740 Pfam PF00135 Carboxylesterase family 134 677 7.8E-63 T 12-10-2018 IPR002018 Carboxylesterase, type B M634_10510 d5869f5f253b9846ed3eb1fa7cacc3b8 740 SUPERFAMILY SSF53474 133 679 4.42E-62 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_03960 0cc5c5744af7b1aa53fee999301977da 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 212 226 1.2E-10 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 M634_03960 0cc5c5744af7b1aa53fee999301977da 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 1.2E-10 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 M634_03960 0cc5c5744af7b1aa53fee999301977da 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 45 60 1.2E-10 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 M634_03960 0cc5c5744af7b1aa53fee999301977da 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 90 103 1.2E-10 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 M634_03960 0cc5c5744af7b1aa53fee999301977da 271 SUPERFAMILY SSF53474 1 268 1.35E-60 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_03960 0cc5c5744af7b1aa53fee999301977da 271 Pfam PF00561 alpha/beta hydrolase fold 23 253 6.6E-21 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 M634_03960 0cc5c5744af7b1aa53fee999301977da 271 PRINTS PR00412 Epoxide hydrolase signature 45 60 5.7E-8 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 M634_03960 0cc5c5744af7b1aa53fee999301977da 271 PRINTS PR00412 Epoxide hydrolase signature 243 265 5.7E-8 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 M634_03960 0cc5c5744af7b1aa53fee999301977da 271 PRINTS PR00412 Epoxide hydrolase signature 104 117 5.7E-8 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 M634_03960 0cc5c5744af7b1aa53fee999301977da 271 Gene3D G3DSA:3.40.50.1820 1 271 1.8E-55 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_19065 79536907a3e887dddf1fd829dac2ea9a 466 Pfam PF01212 Beta-eliminating lyase 46 431 3.4E-98 T 12-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 M634_19065 79536907a3e887dddf1fd829dac2ea9a 466 ProSitePatterns PS00853 Beta-eliminating lyases pyridoxal-phosphate attachment site. 255 273 - T 12-10-2018 IPR018176 Tryptophanase, conserved site KEGG: 00380+4.1.99.1 M634_19065 79536907a3e887dddf1fd829dac2ea9a 466 Gene3D G3DSA:3.90.1150.10 6 460 1.0E-208 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M634_19065 79536907a3e887dddf1fd829dac2ea9a 466 Gene3D G3DSA:3.40.640.10 58 326 1.0E-208 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_19065 79536907a3e887dddf1fd829dac2ea9a 466 Hamap MF_00544 Tryptophanase [tnaA]. 1 465 106.669 T 12-10-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 M634_19065 79536907a3e887dddf1fd829dac2ea9a 466 PIRSF PIRSF001386 1 466 8.2E-230 T 12-10-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 M634_19065 79536907a3e887dddf1fd829dac2ea9a 466 SUPERFAMILY SSF53383 2 465 1.3E-146 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_22510 6afd28aefe3e644e0be294877e804cba 129 PIRSF PIRSF006276 1 129 2.0E-37 T 12-10-2018 IPR006015 Universal stress protein A M634_22510 6afd28aefe3e644e0be294877e804cba 129 SUPERFAMILY SSF52402 3 125 1.67E-21 T 12-10-2018 M634_22510 6afd28aefe3e644e0be294877e804cba 129 Gene3D G3DSA:3.40.50.620 2 129 2.7E-27 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M634_22510 6afd28aefe3e644e0be294877e804cba 129 Pfam PF00582 Universal stress protein family 3 125 8.9E-13 T 12-10-2018 IPR006016 UspA M634_08210 e2d8a612c4c917d7e4628fcb02f69217 557 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 23 0.0012 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal M634_08210 e2d8a612c4c917d7e4628fcb02f69217 557 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 38 125 1.7E-28 T 12-10-2018 IPR032093 Phospholipase D, N-terminal M634_08210 e2d8a612c4c917d7e4628fcb02f69217 557 Pfam PF09423 PhoD-like phosphatase 136 528 3.2E-116 T 12-10-2018 IPR018946 Alkaline phosphatase D-related M634_08210 e2d8a612c4c917d7e4628fcb02f69217 557 SUPERFAMILY SSF56300 136 532 3.35E-31 T 12-10-2018 M634_08210 e2d8a612c4c917d7e4628fcb02f69217 557 Gene3D G3DSA:3.60.21.70 128 555 3.3E-121 T 12-10-2018 IPR038607 PhoD-like superfamily M634_08210 e2d8a612c4c917d7e4628fcb02f69217 557 Gene3D G3DSA:2.60.40.380 29 127 1.4E-32 T 12-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 M634_05930 5754b748594291b8c7c7a8fcaafe08e1 646 SUPERFAMILY SSF64518 172 645 1.83E-26 T 12-10-2018 M634_05930 5754b748594291b8c7c7a8fcaafe08e1 646 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 5 328 9.4E-61 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 M634_05930 5754b748594291b8c7c7a8fcaafe08e1 646 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 600 645 7.5E-9 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain M634_05930 5754b748594291b8c7c7a8fcaafe08e1 646 PRINTS PR01005 Flagellar hook-associated protein signature 50 72 2.0E-8 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 M634_05930 5754b748594291b8c7c7a8fcaafe08e1 646 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 2.0E-8 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 M634_05930 5754b748594291b8c7c7a8fcaafe08e1 646 PRINTS PR01005 Flagellar hook-associated protein signature 360 382 2.0E-8 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 M634_05930 5754b748594291b8c7c7a8fcaafe08e1 646 PRINTS PR01005 Flagellar hook-associated protein signature 158 182 2.0E-8 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 M634_14120 344cef93d718ea5c34938b324ea442b5 407 Gene3D G3DSA:2.40.30.10 126 264 3.0E-53 T 12-10-2018 M634_14120 344cef93d718ea5c34938b324ea442b5 407 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 3 407 2.1E-229 T 12-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 M634_14120 344cef93d718ea5c34938b324ea442b5 407 SUPERFAMILY SSF52343 258 402 9.82E-36 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M634_14120 344cef93d718ea5c34938b324ea442b5 407 Gene3D G3DSA:3.10.20.30 34 125 6.0E-33 T 12-10-2018 IPR012675 Beta-grasp domain superfamily M634_14120 344cef93d718ea5c34938b324ea442b5 407 SUPERFAMILY SSF54292 38 124 1.06E-21 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 M634_14120 344cef93d718ea5c34938b324ea442b5 407 Gene3D G3DSA:3.40.50.80 275 393 1.6E-30 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M634_14120 344cef93d718ea5c34938b324ea442b5 407 Pfam PF00175 Oxidoreductase NAD-binding domain 277 385 2.7E-16 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 M634_14120 344cef93d718ea5c34938b324ea442b5 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 242 251 4.3E-6 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M634_14120 344cef93d718ea5c34938b324ea442b5 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 302 311 4.3E-6 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M634_14120 344cef93d718ea5c34938b324ea442b5 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 209 216 4.3E-6 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M634_14120 344cef93d718ea5c34938b324ea442b5 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 276 295 4.3E-6 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M634_14120 344cef93d718ea5c34938b324ea442b5 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 373 381 4.3E-6 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M634_14120 344cef93d718ea5c34938b324ea442b5 407 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 43 115 2.5E-10 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 M634_14120 344cef93d718ea5c34938b324ea442b5 407 Pfam PF00970 Oxidoreductase FAD-binding domain 204 266 9.4E-9 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 M634_14120 344cef93d718ea5c34938b324ea442b5 407 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 1 407 62.814 T 12-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 M634_14120 344cef93d718ea5c34938b324ea442b5 407 PIRSF PIRSF000044 1 407 5.8E-219 T 12-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 M634_14120 344cef93d718ea5c34938b324ea442b5 407 SUPERFAMILY SSF63380 105 272 3.08E-36 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel M634_14745 a9b8d9055750b6ba51471bb227a1e68b 1043 SUPERFAMILY SSF82693 41 133 2.62E-23 T 12-10-2018 M634_14745 a9b8d9055750b6ba51471bb227a1e68b 1043 Gene3D G3DSA:3.30.70.1430 41 806 1.5E-260 T 12-10-2018 M634_14745 a9b8d9055750b6ba51471bb227a1e68b 1043 SUPERFAMILY SSF82714 184 263 2.09E-11 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_14745 a9b8d9055750b6ba51471bb227a1e68b 1043 Gene3D G3DSA:3.30.70.1320 135 325 1.5E-260 T 12-10-2018 M634_14745 a9b8d9055750b6ba51471bb227a1e68b 1043 Gene3D G3DSA:3.30.2090.10 710 798 1.5E-260 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_14745 a9b8d9055750b6ba51471bb227a1e68b 1043 Gene3D G3DSA:1.20.1640.10 13 507 1.5E-260 T 12-10-2018 M634_14745 a9b8d9055750b6ba51471bb227a1e68b 1043 SUPERFAMILY SSF82866 793 1029 3.14E-49 T 12-10-2018 M634_14745 a9b8d9055750b6ba51471bb227a1e68b 1043 Gene3D G3DSA:1.20.1640.10 508 1023 1.5E-260 T 12-10-2018 M634_14745 a9b8d9055750b6ba51471bb227a1e68b 1043 SUPERFAMILY SSF82714 711 793 5.89E-5 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_14745 a9b8d9055750b6ba51471bb227a1e68b 1043 Pfam PF00873 AcrB/AcrD/AcrF family 5 1026 1.3E-174 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_14745 a9b8d9055750b6ba51471bb227a1e68b 1043 Gene3D G3DSA:3.30.70.1440 657 857 1.5E-260 T 12-10-2018 M634_14745 a9b8d9055750b6ba51471bb227a1e68b 1043 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 2.2E-28 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_14745 a9b8d9055750b6ba51471bb227a1e68b 1043 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 2.2E-28 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_14745 a9b8d9055750b6ba51471bb227a1e68b 1043 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 2.2E-28 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_14745 a9b8d9055750b6ba51471bb227a1e68b 1043 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 2.2E-28 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_14745 a9b8d9055750b6ba51471bb227a1e68b 1043 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 2.2E-28 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_14745 a9b8d9055750b6ba51471bb227a1e68b 1043 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 2.2E-28 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_14745 a9b8d9055750b6ba51471bb227a1e68b 1043 SUPERFAMILY SSF82866 289 490 5.36E-41 T 12-10-2018 M634_14745 a9b8d9055750b6ba51471bb227a1e68b 1043 Gene3D G3DSA:3.30.70.1430 567 656 1.5E-260 T 12-10-2018 M634_14745 a9b8d9055750b6ba51471bb227a1e68b 1043 SUPERFAMILY SSF82693 142 325 1.26E-12 T 12-10-2018 M634_14745 a9b8d9055750b6ba51471bb227a1e68b 1043 Gene3D G3DSA:3.30.2090.10 179 270 1.5E-260 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_02965 e3ceca5b00275f1b5424f968f91930f3 160 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 1 157 34.649 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 M634_02965 e3ceca5b00275f1b5424f968f91930f3 160 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 60 1.7E-18 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 M634_02965 e3ceca5b00275f1b5424f968f91930f3 160 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 3 155 5.8E-59 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 M634_02965 e3ceca5b00275f1b5424f968f91930f3 160 Gene3D G3DSA:3.40.50.620 1 160 5.2E-55 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M634_02965 e3ceca5b00275f1b5424f968f91930f3 160 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 10 93 9.0E-4 T 12-10-2018 M634_02965 e3ceca5b00275f1b5424f968f91930f3 160 SUPERFAMILY SSF52374 2 155 2.25E-44 T 12-10-2018 M634_02965 e3ceca5b00275f1b5424f968f91930f3 160 Pfam PF01467 Cytidylyltransferase-like 4 132 2.9E-19 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 M634_02965 e3ceca5b00275f1b5424f968f91930f3 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 1 19 9.0E-48 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 M634_02965 e3ceca5b00275f1b5424f968f91930f3 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 48 72 9.0E-48 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 M634_02965 e3ceca5b00275f1b5424f968f91930f3 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 84 100 9.0E-48 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 M634_02965 e3ceca5b00275f1b5424f968f91930f3 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 19 40 9.0E-48 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 M634_02965 e3ceca5b00275f1b5424f968f91930f3 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 111 133 9.0E-48 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 M634_23175 8e321949ec8c7b13ca1a75a0510289ed 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 56 9.5E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M634_23175 8e321949ec8c7b13ca1a75a0510289ed 191 Gene3D G3DSA:1.10.10.60 1 66 4.5E-21 T 12-10-2018 M634_23175 8e321949ec8c7b13ca1a75a0510289ed 191 SUPERFAMILY SSF48498 83 174 1.97E-13 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily M634_23175 8e321949ec8c7b13ca1a75a0510289ed 191 SUPERFAMILY SSF46689 2 65 2.31E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_23175 8e321949ec8c7b13ca1a75a0510289ed 191 Gene3D G3DSA:1.10.357.10 73 189 4.3E-14 T 12-10-2018 M634_04490 3aa3466aeca708979102a2d3f64cc875 748 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 351 362 - T 12-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 M634_04490 3aa3466aeca708979102a2d3f64cc875 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 320 391 2.4E-15 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 M634_04490 3aa3466aeca708979102a2d3f64cc875 748 Pfam PF01590 GAF domain 17 153 2.3E-14 T 12-10-2018 IPR003018 GAF domain GO:0005515 M634_04490 3aa3466aeca708979102a2d3f64cc875 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 612 627 1.2E-22 T 12-10-2018 M634_04490 3aa3466aeca708979102a2d3f64cc875 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 665 677 1.2E-22 T 12-10-2018 M634_04490 3aa3466aeca708979102a2d3f64cc875 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 1.2E-22 T 12-10-2018 M634_04490 3aa3466aeca708979102a2d3f64cc875 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 629 644 1.2E-22 T 12-10-2018 M634_04490 3aa3466aeca708979102a2d3f64cc875 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 421 706 2.1E-96 T 12-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 M634_04490 3aa3466aeca708979102a2d3f64cc875 748 SMART SM00065 17 163 1.4E-21 T 12-10-2018 IPR003018 GAF domain GO:0005515 M634_04490 3aa3466aeca708979102a2d3f64cc875 748 Gene3D G3DSA:3.30.450.40 1 161 1.1E-40 T 12-10-2018 IPR029016 GAF-like domain superfamily M634_04490 3aa3466aeca708979102a2d3f64cc875 748 SUPERFAMILY SSF47831 204 311 6.28E-27 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 M634_04490 3aa3466aeca708979102a2d3f64cc875 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 171 730 6.1E-137 T 12-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 M634_04490 3aa3466aeca708979102a2d3f64cc875 748 Gene3D G3DSA:1.10.274.10 190 314 5.9E-57 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 M634_04490 3aa3466aeca708979102a2d3f64cc875 748 SUPERFAMILY SSF52009 293 412 1.12E-26 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 M634_04490 3aa3466aeca708979102a2d3f64cc875 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 172 294 1.3E-21 T 12-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 M634_04490 3aa3466aeca708979102a2d3f64cc875 748 SUPERFAMILY SSF55781 2 158 2.18E-31 T 12-10-2018 M634_04490 3aa3466aeca708979102a2d3f64cc875 748 Gene3D G3DSA:3.50.30.10 173 399 5.9E-57 T 12-10-2018 M634_04490 3aa3466aeca708979102a2d3f64cc875 748 Gene3D G3DSA:3.20.20.60 400 739 9.4E-105 T 12-10-2018 M634_04490 3aa3466aeca708979102a2d3f64cc875 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 612 630 - T 12-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 M634_04490 3aa3466aeca708979102a2d3f64cc875 748 SUPERFAMILY SSF51621 423 714 3.14E-98 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 M634_16765 2662937e5c34589986dbac1d058b8437 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 283 3.8E-27 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_16765 2662937e5c34589986dbac1d058b8437 287 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 14 283 6.9E-100 T 12-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 M634_16765 2662937e5c34589986dbac1d058b8437 287 Gene3D G3DSA:1.10.3720.10 62 285 2.2E-35 T 12-10-2018 IPR035906 MetI-like superfamily M634_16765 2662937e5c34589986dbac1d058b8437 287 SUPERFAMILY SSF161098 22 274 1.68E-42 T 12-10-2018 IPR035906 MetI-like superfamily M634_01450 47b95659dc49afbc63831932d6ecf8e2 104 SUPERFAMILY SSF55387 1 103 6.63E-39 T 12-10-2018 M634_01450 47b95659dc49afbc63831932d6ecf8e2 104 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 103 1.6E-42 T 12-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 M634_01450 47b95659dc49afbc63831932d6ecf8e2 104 Gene3D G3DSA:3.30.920.10 1 104 2.2E-38 T 12-10-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 M634_01450 47b95659dc49afbc63831932d6ecf8e2 104 ProSitePatterns PS01344 Frataxin family signature. 48 62 - T 12-10-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 M634_01450 47b95659dc49afbc63831932d6ecf8e2 104 SMART SM01219 1 104 4.5E-55 T 12-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 M634_01450 47b95659dc49afbc63831932d6ecf8e2 104 Pfam PF01491 Frataxin-like domain 1 100 7.2E-30 T 12-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 M634_01450 47b95659dc49afbc63831932d6ecf8e2 104 Hamap MF_00142 Iron-sulfur cluster assembly protein CyaY [cyaY]. 1 103 27.214 T 12-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 M634_18005 197a9894862da64c86cb8e7e2721f3bc 292 SUPERFAMILY SSF46689 237 286 2.28E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_18005 197a9894862da64c86cb8e7e2721f3bc 292 Gene3D G3DSA:1.10.10.60 184 288 1.5E-22 T 12-10-2018 M634_18005 197a9894862da64c86cb8e7e2721f3bc 292 SUPERFAMILY SSF46689 184 235 7.85E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_18005 197a9894862da64c86cb8e7e2721f3bc 292 Pfam PF06719 AraC-type transcriptional regulator N-terminus 34 172 5.0E-45 T 12-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal M634_18005 197a9894862da64c86cb8e7e2721f3bc 292 Pfam PF12833 Helix-turn-helix domain 207 282 3.3E-15 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_18005 197a9894862da64c86cb8e7e2721f3bc 292 SMART SM00342 201 284 8.9E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_08945 40b61ca3bae2ff83a9d412caa3858c02 501 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 7 487 1.6E-203 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 M634_08945 40b61ca3bae2ff83a9d412caa3858c02 501 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 11 192 5.9E-65 T 12-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 M634_08945 40b61ca3bae2ff83a9d412caa3858c02 501 PIRSF PIRSF000110 2 490 1.3E-178 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 M634_08945 40b61ca3bae2ff83a9d412caa3858c02 501 SUPERFAMILY SSF55347 182 490 8.17E-113 T 12-10-2018 M634_08945 40b61ca3bae2ff83a9d412caa3858c02 501 SUPERFAMILY SSF51735 4 195 1.71E-62 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_08945 40b61ca3bae2ff83a9d412caa3858c02 501 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 194 487 6.3E-115 T 12-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 M634_08945 40b61ca3bae2ff83a9d412caa3858c02 501 Gene3D G3DSA:3.40.50.720 5 180 2.0E-60 T 12-10-2018 M634_08945 40b61ca3bae2ff83a9d412caa3858c02 501 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 7 488 85.253 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 M634_08945 40b61ca3bae2ff83a9d412caa3858c02 501 Gene3D G3DSA:3.30.360.10 181 489 8.1E-125 T 12-10-2018 M634_08945 40b61ca3bae2ff83a9d412caa3858c02 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 148 161 1.0E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 M634_08945 40b61ca3bae2ff83a9d412caa3858c02 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 224 241 1.0E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 M634_08945 40b61ca3bae2ff83a9d412caa3858c02 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 333 359 1.0E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 M634_08945 40b61ca3bae2ff83a9d412caa3858c02 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 172 200 1.0E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 M634_08945 40b61ca3bae2ff83a9d412caa3858c02 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 242 258 1.0E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 M634_08945 40b61ca3bae2ff83a9d412caa3858c02 501 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 182 188 - T 12-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 M634_02260 eabb4de582a22f020b62a8ff97c42986 318 Gene3D G3DSA:1.10.3720.10 92 312 5.9E-25 T 12-10-2018 IPR035906 MetI-like superfamily M634_02260 eabb4de582a22f020b62a8ff97c42986 318 SUPERFAMILY SSF161098 99 300 3.66E-25 T 12-10-2018 IPR035906 MetI-like superfamily M634_02260 eabb4de582a22f020b62a8ff97c42986 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 315 4.2E-29 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_02260 eabb4de582a22f020b62a8ff97c42986 318 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 75 1.5E-8 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain M634_05380 d5a435937e46734dfc50eb77c35ac110 306 SUPERFAMILY SSF53850 92 296 1.57E-38 T 12-10-2018 M634_05380 d5a435937e46734dfc50eb77c35ac110 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 2.8E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_05380 d5a435937e46734dfc50eb77c35ac110 306 SUPERFAMILY SSF46785 3 85 6.06E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_05380 d5a435937e46734dfc50eb77c35ac110 306 Gene3D G3DSA:1.10.10.10 7 95 2.0E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_05380 d5a435937e46734dfc50eb77c35ac110 306 Pfam PF03466 LysR substrate binding domain 91 291 2.7E-37 T 12-10-2018 IPR005119 LysR, substrate-binding M634_05380 d5a435937e46734dfc50eb77c35ac110 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.9E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_05380 d5a435937e46734dfc50eb77c35ac110 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.9E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_05380 d5a435937e46734dfc50eb77c35ac110 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.9E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_05380 d5a435937e46734dfc50eb77c35ac110 306 Gene3D G3DSA:3.40.190.10 103 288 4.0E-58 T 12-10-2018 M634_05380 d5a435937e46734dfc50eb77c35ac110 306 Gene3D G3DSA:3.40.190.10 163 261 4.0E-58 T 12-10-2018 M634_04445 3a8dde8798907cade291d2eb7064e39e 260 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 140 156 - T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 M634_04445 3a8dde8798907cade291d2eb7064e39e 260 Gene3D G3DSA:3.30.70.1660 25 253 3.6E-96 T 12-10-2018 M634_04445 3a8dde8798907cade291d2eb7064e39e 260 Pfam PF00472 RF-1 domain 124 232 2.9E-40 T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 M634_04445 3a8dde8798907cade291d2eb7064e39e 260 SMART SM00937 1 90 1.2E-37 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 M634_04445 3a8dde8798907cade291d2eb7064e39e 260 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 258 3.7E-139 T 12-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 M634_04445 3a8dde8798907cade291d2eb7064e39e 260 SUPERFAMILY SSF75620 2 257 3.01E-116 T 12-10-2018 M634_04445 3a8dde8798907cade291d2eb7064e39e 260 Pfam PF03462 PCRF domain 2 114 3.7E-44 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 M634_04445 3a8dde8798907cade291d2eb7064e39e 260 Gene3D G3DSA:3.30.160.20 121 216 3.6E-96 T 12-10-2018 M634_01035 e95fed48b6e7538a2f450d9646660238 226 SUPERFAMILY SSF53098 66 221 7.28E-39 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M634_01035 e95fed48b6e7538a2f450d9646660238 226 Gene3D G3DSA:3.30.420.10 65 225 8.2E-17 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M634_01035 e95fed48b6e7538a2f450d9646660238 226 Pfam PF00665 Integrase core domain 68 182 6.0E-28 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M634_01225 e95fed48b6e7538a2f450d9646660238 226 SUPERFAMILY SSF53098 66 221 7.28E-39 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M634_01225 e95fed48b6e7538a2f450d9646660238 226 Gene3D G3DSA:3.30.420.10 65 225 8.2E-17 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M634_01225 e95fed48b6e7538a2f450d9646660238 226 Pfam PF00665 Integrase core domain 68 182 6.0E-28 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M634_22495 e95fed48b6e7538a2f450d9646660238 226 SUPERFAMILY SSF53098 66 221 7.28E-39 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M634_22495 e95fed48b6e7538a2f450d9646660238 226 Gene3D G3DSA:3.30.420.10 65 225 8.2E-17 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M634_22495 e95fed48b6e7538a2f450d9646660238 226 Pfam PF00665 Integrase core domain 68 182 6.0E-28 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M634_17675 e95fed48b6e7538a2f450d9646660238 226 SUPERFAMILY SSF53098 66 221 7.28E-39 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M634_17675 e95fed48b6e7538a2f450d9646660238 226 Gene3D G3DSA:3.30.420.10 65 225 8.2E-17 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M634_17675 e95fed48b6e7538a2f450d9646660238 226 Pfam PF00665 Integrase core domain 68 182 6.0E-28 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M634_08265 e95fed48b6e7538a2f450d9646660238 226 SUPERFAMILY SSF53098 66 221 7.28E-39 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M634_08265 e95fed48b6e7538a2f450d9646660238 226 Gene3D G3DSA:3.30.420.10 65 225 8.2E-17 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M634_08265 e95fed48b6e7538a2f450d9646660238 226 Pfam PF00665 Integrase core domain 68 182 6.0E-28 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M634_22520 e95fed48b6e7538a2f450d9646660238 226 SUPERFAMILY SSF53098 66 221 7.28E-39 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M634_22520 e95fed48b6e7538a2f450d9646660238 226 Gene3D G3DSA:3.30.420.10 65 225 8.2E-17 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M634_22520 e95fed48b6e7538a2f450d9646660238 226 Pfam PF00665 Integrase core domain 68 182 6.0E-28 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M634_03460 e83f318598ff96a41e2839f641fa383e 476 Gene3D G3DSA:2.40.30.10 331 434 2.4E-29 T 12-10-2018 M634_03460 e83f318598ff96a41e2839f641fa383e 476 SUPERFAMILY SSF50465 332 434 4.12E-30 T 12-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal M634_03460 e83f318598ff96a41e2839f641fa383e 476 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 33 212 2.3E-12 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 M634_03460 e83f318598ff96a41e2839f641fa383e 476 Gene3D G3DSA:3.40.50.300 6 239 6.7E-71 T 12-10-2018 M634_03460 e83f318598ff96a41e2839f641fa383e 476 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 82 97 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site M634_03460 e83f318598ff96a41e2839f641fa383e 476 Pfam PF00009 Elongation factor Tu GTP binding domain 26 234 1.6E-44 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_03460 e83f318598ff96a41e2839f641fa383e 476 Gene3D G3DSA:2.40.30.10 242 327 1.3E-26 T 12-10-2018 M634_03460 e83f318598ff96a41e2839f641fa383e 476 PRINTS PR00315 GTP-binding elongation factor signature 125 136 5.9E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_03460 e83f318598ff96a41e2839f641fa383e 476 PRINTS PR00315 GTP-binding elongation factor signature 109 119 5.9E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_03460 e83f318598ff96a41e2839f641fa383e 476 PRINTS PR00315 GTP-binding elongation factor signature 89 97 5.9E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_03460 e83f318598ff96a41e2839f641fa383e 476 PRINTS PR00315 GTP-binding elongation factor signature 162 171 5.9E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_03460 e83f318598ff96a41e2839f641fa383e 476 PRINTS PR00315 GTP-binding elongation factor signature 28 41 5.9E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_03460 e83f318598ff96a41e2839f641fa383e 476 SUPERFAMILY SSF50447 243 324 1.72E-23 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily M634_03460 e83f318598ff96a41e2839f641fa383e 476 SUPERFAMILY SSF52540 18 235 1.6E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_03460 e83f318598ff96a41e2839f641fa383e 476 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 27 433 2.3E-197 T 12-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 M634_03460 e83f318598ff96a41e2839f641fa383e 476 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 18 474 53.679 T 12-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 M634_00435 29acd69719a5da366fe6e71805de4e20 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 5.7E-11 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 M634_00435 29acd69719a5da366fe6e71805de4e20 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 5.7E-11 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 M634_00435 29acd69719a5da366fe6e71805de4e20 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 12-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site M634_00435 29acd69719a5da366fe6e71805de4e20 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 8.8E-16 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 M634_00435 29acd69719a5da366fe6e71805de4e20 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 12-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site M634_00435 29acd69719a5da366fe6e71805de4e20 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 12-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 M634_00435 29acd69719a5da366fe6e71805de4e20 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 7.0E-23 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain M634_00435 29acd69719a5da366fe6e71805de4e20 210 SUPERFAMILY SSF51206 8 137 7.33E-35 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like M634_00435 29acd69719a5da366fe6e71805de4e20 210 Gene3D G3DSA:2.60.120.10 10 138 3.0E-43 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M634_00435 29acd69719a5da366fe6e71805de4e20 210 SMART SM00419 160 208 4.2E-17 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 M634_00435 29acd69719a5da366fe6e71805de4e20 210 SUPERFAMILY SSF46785 139 207 3.88E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_00435 29acd69719a5da366fe6e71805de4e20 210 Gene3D G3DSA:1.10.10.10 139 207 1.0E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_00435 29acd69719a5da366fe6e71805de4e20 210 SMART SM00100 2 122 3.7E-27 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain M634_15170 e56fab375e1e721503c58069f9eac722 155 Pfam PF02631 RecX family 34 150 1.2E-30 T 12-10-2018 IPR003783 Regulatory protein RecX GO:0006282 M634_15170 e56fab375e1e721503c58069f9eac722 155 Gene3D G3DSA:1.10.10.10 58 101 2.5E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_15170 e56fab375e1e721503c58069f9eac722 155 Gene3D G3DSA:1.10.10.10 104 151 2.4E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_15170 e56fab375e1e721503c58069f9eac722 155 Gene3D G3DSA:1.10.10.10 11 52 6.5E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_15170 e56fab375e1e721503c58069f9eac722 155 Hamap MF_01114 Regulatory protein RecX [recX]. 7 155 13.898 T 12-10-2018 IPR003783 Regulatory protein RecX GO:0006282 M634_14635 287316b7e2adf8f0846773b1a66100dc 711 SUPERFAMILY SSF54211 293 489 1.16E-46 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M634_14635 287316b7e2adf8f0846773b1a66100dc 711 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 321 1.9E-24 T 12-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 M634_14635 287316b7e2adf8f0846773b1a66100dc 711 Gene3D G3DSA:2.40.50.140 623 694 1.7E-29 T 12-10-2018 M634_14635 287316b7e2adf8f0846773b1a66100dc 711 SUPERFAMILY SSF50249 608 695 3.17E-21 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_14635 287316b7e2adf8f0846773b1a66100dc 711 Pfam PF00013 KH domain 557 615 1.6E-8 T 12-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 M634_14635 287316b7e2adf8f0846773b1a66100dc 711 Pfam PF01138 3' exoribonuclease family, domain 1 17 145 6.1E-18 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 M634_14635 287316b7e2adf8f0846773b1a66100dc 711 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 4.2E-20 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 M634_14635 287316b7e2adf8f0846773b1a66100dc 711 Pfam PF00575 S1 RNA binding domain 620 691 2.0E-18 T 12-10-2018 IPR003029 S1 domain GO:0003676 M634_14635 287316b7e2adf8f0846773b1a66100dc 711 Gene3D G3DSA:3.30.230.70 2 229 3.7E-76 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 M634_14635 287316b7e2adf8f0846773b1a66100dc 711 Pfam PF03725 3' exoribonuclease family, domain 2 148 211 2.0E-12 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 M634_14635 287316b7e2adf8f0846773b1a66100dc 711 SMART SM00316 621 691 3.3E-25 T 12-10-2018 IPR022967 RNA-binding domain, S1 M634_14635 287316b7e2adf8f0846773b1a66100dc 711 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 4 694 30.135 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 M634_14635 287316b7e2adf8f0846773b1a66100dc 711 SUPERFAMILY SSF55666 146 236 1.33E-28 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 M634_14635 287316b7e2adf8f0846773b1a66100dc 711 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 11 692 0.0 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 M634_14635 287316b7e2adf8f0846773b1a66100dc 711 SUPERFAMILY SSF54211 5 145 5.57E-48 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M634_14635 287316b7e2adf8f0846773b1a66100dc 711 SUPERFAMILY SSF55666 451 549 3.23E-27 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 M634_14635 287316b7e2adf8f0846773b1a66100dc 711 Gene3D G3DSA:3.30.1370.10 551 622 1.4E-18 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 M634_14635 287316b7e2adf8f0846773b1a66100dc 711 PIRSF PIRSF005499 2 711 1.4E-296 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 M634_14635 287316b7e2adf8f0846773b1a66100dc 711 Gene3D G3DSA:3.30.230.70 234 550 4.0E-115 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 M634_14635 287316b7e2adf8f0846773b1a66100dc 711 SUPERFAMILY SSF54791 553 630 1.06E-15 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 M634_14635 287316b7e2adf8f0846773b1a66100dc 711 SMART SM00322 553 618 3.6E-11 T 12-10-2018 IPR004087 K Homology domain GO:0003676 M634_08190 be677324153b4f3063c077cf98d64db8 562 SUPERFAMILY SSF51735 268 559 2.33E-96 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_08190 be677324153b4f3063c077cf98d64db8 562 SUPERFAMILY SSF53223 4 267 7.91E-110 T 12-10-2018 M634_08190 be677324153b4f3063c077cf98d64db8 562 SMART SM01274 78 258 1.5E-107 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 M634_08190 be677324153b4f3063c077cf98d64db8 562 Pfam PF03949 Malic enzyme, NAD binding domain 268 528 6.6E-104 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 M634_08190 be677324153b4f3063c077cf98d64db8 562 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 1 562 73.083 T 12-10-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38|MetaCyc: PWY-6339 M634_08190 be677324153b4f3063c077cf98d64db8 562 SMART SM00919 268 528 3.6E-134 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 M634_08190 be677324153b4f3063c077cf98d64db8 562 Pfam PF00390 Malic enzyme, N-terminal domain 78 258 8.3E-78 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 M634_08190 be677324153b4f3063c077cf98d64db8 562 Gene3D G3DSA:3.40.50.720 266 562 2.9E-110 T 12-10-2018 M634_08190 be677324153b4f3063c077cf98d64db8 562 ProSitePatterns PS00331 Malic enzymes signature. 264 280 - T 12-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 M634_08190 be677324153b4f3063c077cf98d64db8 562 PRINTS PR00072 Malic enzyme signature 144 173 1.3E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 M634_08190 be677324153b4f3063c077cf98d64db8 562 PRINTS PR00072 Malic enzyme signature 180 202 1.3E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 M634_08190 be677324153b4f3063c077cf98d64db8 562 PRINTS PR00072 Malic enzyme signature 405 421 1.3E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 M634_08190 be677324153b4f3063c077cf98d64db8 562 PRINTS PR00072 Malic enzyme signature 264 280 1.3E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 M634_08190 be677324153b4f3063c077cf98d64db8 562 PRINTS PR00072 Malic enzyme signature 84 108 1.3E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 M634_08190 be677324153b4f3063c077cf98d64db8 562 PRINTS PR00072 Malic enzyme signature 295 311 1.3E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 M634_08190 be677324153b4f3063c077cf98d64db8 562 PRINTS PR00072 Malic enzyme signature 239 257 1.3E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 M634_08190 be677324153b4f3063c077cf98d64db8 562 Gene3D G3DSA:3.40.50.10380 13 265 1.4E-114 T 12-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 M634_08190 be677324153b4f3063c077cf98d64db8 562 PIRSF PIRSF000106 2 560 7.5E-226 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 M634_01055 6f5bfd0ff8b648ba1f7d049fd29395ff 190 Pfam PF03167 Uracil DNA glycosylase superfamily 31 178 1.2E-26 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 M634_01055 6f5bfd0ff8b648ba1f7d049fd29395ff 190 Gene3D G3DSA:3.40.470.10 1 190 3.1E-75 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 M634_01055 6f5bfd0ff8b648ba1f7d049fd29395ff 190 SUPERFAMILY SSF52141 2 189 6.54E-59 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 M634_01055 6f5bfd0ff8b648ba1f7d049fd29395ff 190 SMART SM00987 27 183 7.1E-31 T 12-10-2018 M634_01055 6f5bfd0ff8b648ba1f7d049fd29395ff 190 SMART SM00986 27 183 7.1E-31 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 M634_12065 69190998f39eb0c18e0c0812ddd8f9d7 220 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 34 210 2.4E-62 T 12-10-2018 IPR006008 Intracellular septation protein A GO:0016021 M634_12065 69190998f39eb0c18e0c0812ddd8f9d7 220 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 34 208 18.39 T 12-10-2018 IPR006008 Intracellular septation protein A GO:0016021 M634_12065 69190998f39eb0c18e0c0812ddd8f9d7 220 Pfam PF04279 Intracellular septation protein A 34 207 2.8E-66 T 12-10-2018 IPR006008 Intracellular septation protein A GO:0016021 M634_14705 af4fca64d31e192f8b269430f7702e8d 209 Pfam PF01728 FtsJ-like methyltransferase 31 207 1.7E-57 T 12-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 M634_14705 af4fca64d31e192f8b269430f7702e8d 209 SUPERFAMILY SSF53335 30 209 4.75E-45 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_14705 af4fca64d31e192f8b269430f7702e8d 209 PIRSF PIRSF005461 1 209 4.2E-80 T 12-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 M634_14705 af4fca64d31e192f8b269430f7702e8d 209 Gene3D G3DSA:3.40.50.150 30 209 2.1E-60 T 12-10-2018 M634_14705 af4fca64d31e192f8b269430f7702e8d 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 15 208 28.812 T 12-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 M634_17650 73a4e6a515415c5bff1d0b38c4bceffe 1329 Gene3D G3DSA:2.60.40.1130 180 296 5.2E-31 T 12-10-2018 M634_17650 73a4e6a515415c5bff1d0b38c4bceffe 1329 SUPERFAMILY SSF81296 1106 1153 9.8E-6 T 12-10-2018 IPR014756 Immunoglobulin E-set M634_17650 73a4e6a515415c5bff1d0b38c4bceffe 1329 SMART SM00642 552 915 2.7E-4 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 M634_17650 73a4e6a515415c5bff1d0b38c4bceffe 1329 SUPERFAMILY SSF81296 171 296 1.06E-30 T 12-10-2018 IPR014756 Immunoglobulin E-set M634_17650 73a4e6a515415c5bff1d0b38c4bceffe 1329 Pfam PF03714 Bacterial pullanase-associated domain 51 171 5.1E-17 T 12-10-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 M634_17650 73a4e6a515415c5bff1d0b38c4bceffe 1329 Gene3D G3DSA:2.60.40.10 303 409 3.1E-29 T 12-10-2018 IPR013783 Immunoglobulin-like fold M634_17650 73a4e6a515415c5bff1d0b38c4bceffe 1329 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 311 395 3.9E-14 T 12-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 M634_17650 73a4e6a515415c5bff1d0b38c4bceffe 1329 SUPERFAMILY SSF49452 25 171 1.21E-28 T 12-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 M634_17650 73a4e6a515415c5bff1d0b38c4bceffe 1329 SUPERFAMILY SSF51011 978 1092 5.39E-39 T 12-10-2018 M634_17650 73a4e6a515415c5bff1d0b38c4bceffe 1329 Pfam PF11852 Domain of unknown function (DUF3372) 917 1079 7.9E-63 T 12-10-2018 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal M634_17650 73a4e6a515415c5bff1d0b38c4bceffe 1329 TIGRFAM TIGR02103 pullul_strch: alpha-1,6-glucosidases, pullulanase-type 180 1080 0.0 T 12-10-2018 IPR011839 Alpha-1,6-glucosidases, pullulanase-type GO:0005975|GO:0051060 M634_17650 73a4e6a515415c5bff1d0b38c4bceffe 1329 Gene3D G3DSA:3.20.20.80 410 1010 2.4E-216 T 12-10-2018 M634_17650 73a4e6a515415c5bff1d0b38c4bceffe 1329 SUPERFAMILY SSF51445 407 975 3.77E-125 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M634_17650 73a4e6a515415c5bff1d0b38c4bceffe 1329 Gene3D G3DSA:2.60.40.1180 1011 1094 1.2E-28 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta M634_17650 73a4e6a515415c5bff1d0b38c4bceffe 1329 SUPERFAMILY SSF81296 310 412 1.92E-20 T 12-10-2018 IPR014756 Immunoglobulin E-set M634_17650 73a4e6a515415c5bff1d0b38c4bceffe 1329 Gene3D G3DSA:2.60.40.10 1095 1160 1.4E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold M634_17650 73a4e6a515415c5bff1d0b38c4bceffe 1329 Gene3D G3DSA:2.60.40.1110 34 170 1.1E-29 T 12-10-2018 M634_17095 9a50c25d3fa697e522984d95c1238c1c 308 SUPERFAMILY SSF103481 42 139 2.22E-12 T 12-10-2018 M634_17095 9a50c25d3fa697e522984d95c1238c1c 308 Pfam PF00892 EamA-like transporter family 150 287 8.7E-11 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M634_17095 9a50c25d3fa697e522984d95c1238c1c 308 Pfam PF00892 EamA-like transporter family 6 136 4.8E-15 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M634_17095 9a50c25d3fa697e522984d95c1238c1c 308 SUPERFAMILY SSF103481 182 288 1.01E-6 T 12-10-2018 M634_20460 78dc2ee51c0a2d5e3d8bca224d6ae5b2 351 SUPERFAMILY SSF111369 44 245 8.89E-16 T 12-10-2018 M634_20460 78dc2ee51c0a2d5e3d8bca224d6ae5b2 351 Pfam PF13533 Biotin-lipoyl like 44 91 3.3E-14 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain M634_20460 78dc2ee51c0a2d5e3d8bca224d6ae5b2 351 Gene3D G3DSA:1.10.287.470 77 199 1.2E-36 T 12-10-2018 M634_20460 78dc2ee51c0a2d5e3d8bca224d6ae5b2 351 Gene3D G3DSA:2.40.30.170 234 278 1.2E-36 T 12-10-2018 M634_20460 78dc2ee51c0a2d5e3d8bca224d6ae5b2 351 Gene3D G3DSA:2.40.50.100 45 233 1.2E-36 T 12-10-2018 M634_13950 09f130a58c83c473fd97e1ed487df524 452 SMART SM00228 212 281 3.2E-9 T 12-10-2018 IPR001478 PDZ domain GO:0005515 M634_13950 09f130a58c83c473fd97e1ed487df524 452 SMART SM00228 115 186 0.43 T 12-10-2018 IPR001478 PDZ domain GO:0005515 M634_13950 09f130a58c83c473fd97e1ed487df524 452 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 4 452 8.8E-136 T 12-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 M634_13950 09f130a58c83c473fd97e1ed487df524 452 Gene3D G3DSA:2.30.42.10 222 311 7.3E-21 T 12-10-2018 M634_13950 09f130a58c83c473fd97e1ed487df524 452 SUPERFAMILY SSF50156 210 294 1.71E-17 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 M634_13950 09f130a58c83c473fd97e1ed487df524 452 Pfam PF02163 Peptidase family M50 11 440 3.2E-87 T 12-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 M634_13950 09f130a58c83c473fd97e1ed487df524 452 SUPERFAMILY SSF50156 89 185 4.47E-11 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 M634_13950 09f130a58c83c473fd97e1ed487df524 452 Pfam PF13180 PDZ domain 226 288 3.4E-8 T 12-10-2018 IPR001478 PDZ domain GO:0005515 M634_13950 09f130a58c83c473fd97e1ed487df524 452 Gene3D G3DSA:2.30.42.10 126 221 7.3E-32 T 12-10-2018 M634_16870 bcba26cc16e0e76e97f417b12ff934a4 182 Pfam PF07155 ECF-type riboflavin transporter, S component 3 171 8.8E-44 T 12-10-2018 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 M634_16870 bcba26cc16e0e76e97f417b12ff934a4 182 Hamap MF_01572 UPF0397 protein . 1 182 21.259 T 12-10-2018 IPR022914 Protein of unknown function UPF0397 M634_16870 bcba26cc16e0e76e97f417b12ff934a4 182 Gene3D G3DSA:1.10.1760.20 1 177 4.9E-19 T 12-10-2018 M634_19850 efdd4841c1cb91398460ced6ef1c5d3b 1052 SUPERFAMILY SSF82866 792 1019 5.75E-49 T 12-10-2018 M634_19850 efdd4841c1cb91398460ced6ef1c5d3b 1052 Gene3D G3DSA:3.30.70.1430 559 659 1.3E-255 T 12-10-2018 M634_19850 efdd4841c1cb91398460ced6ef1c5d3b 1052 Pfam PF00873 AcrB/AcrD/AcrF family 9 1016 6.8E-162 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_19850 efdd4841c1cb91398460ced6ef1c5d3b 1052 SUPERFAMILY SSF82714 185 266 2.88E-14 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_19850 efdd4841c1cb91398460ced6ef1c5d3b 1052 Gene3D G3DSA:3.30.70.1430 46 803 1.3E-255 T 12-10-2018 M634_19850 efdd4841c1cb91398460ced6ef1c5d3b 1052 Gene3D G3DSA:3.30.70.1440 660 856 1.3E-255 T 12-10-2018 M634_19850 efdd4841c1cb91398460ced6ef1c5d3b 1052 Gene3D G3DSA:3.30.2090.10 708 795 1.3E-255 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_19850 efdd4841c1cb91398460ced6ef1c5d3b 1052 Gene3D G3DSA:1.20.1640.10 502 1013 1.3E-255 T 12-10-2018 M634_19850 efdd4841c1cb91398460ced6ef1c5d3b 1052 Gene3D G3DSA:3.30.70.1320 139 327 1.3E-255 T 12-10-2018 M634_19850 efdd4841c1cb91398460ced6ef1c5d3b 1052 SUPERFAMILY SSF82866 292 488 5.49E-37 T 12-10-2018 M634_19850 efdd4841c1cb91398460ced6ef1c5d3b 1052 Gene3D G3DSA:1.20.1640.10 16 501 1.3E-255 T 12-10-2018 M634_19850 efdd4841c1cb91398460ced6ef1c5d3b 1052 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 3.0E-24 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_19850 efdd4841c1cb91398460ced6ef1c5d3b 1052 PRINTS PR00702 Acriflavin resistance protein family signature 16 40 3.0E-24 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_19850 efdd4841c1cb91398460ced6ef1c5d3b 1052 PRINTS PR00702 Acriflavin resistance protein family signature 44 62 3.0E-24 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_19850 efdd4841c1cb91398460ced6ef1c5d3b 1052 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 3.0E-24 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_19850 efdd4841c1cb91398460ced6ef1c5d3b 1052 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 3.0E-24 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_19850 efdd4841c1cb91398460ced6ef1c5d3b 1052 SUPERFAMILY SSF82714 719 793 3.27E-7 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_19850 efdd4841c1cb91398460ced6ef1c5d3b 1052 SUPERFAMILY SSF82693 46 138 5.75E-19 T 12-10-2018 M634_19850 efdd4841c1cb91398460ced6ef1c5d3b 1052 SUPERFAMILY SSF82693 150 325 1.52E-9 T 12-10-2018 M634_19850 efdd4841c1cb91398460ced6ef1c5d3b 1052 Gene3D G3DSA:3.30.2090.10 180 270 1.3E-255 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_07490 8593db38d4aa007087f08b5ebff46352 350 Pfam PF04055 Radical SAM superfamily 50 199 3.2E-15 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 M634_07490 8593db38d4aa007087f08b5ebff46352 350 PIRSF PIRSF001619 1 319 3.8E-138 T 12-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 M634_07490 8593db38d4aa007087f08b5ebff46352 350 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 2.5E-20 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 M634_07490 8593db38d4aa007087f08b5ebff46352 350 SMART SM00876 220 312 6.0E-46 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 M634_07490 8593db38d4aa007087f08b5ebff46352 350 SMART SM00729 43 255 2.1E-40 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 M634_07490 8593db38d4aa007087f08b5ebff46352 350 SUPERFAMILY SSF102114 5 310 6.41E-90 T 12-10-2018 M634_07490 8593db38d4aa007087f08b5ebff46352 350 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.777 T 12-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 M634_07490 8593db38d4aa007087f08b5ebff46352 350 TIGRFAM TIGR00433 bioB: biotin synthase 15 310 5.8E-125 T 12-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 M634_07490 8593db38d4aa007087f08b5ebff46352 350 Gene3D G3DSA:3.20.20.70 4 315 2.6E-132 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_10770 dfa0f37de1a8783ef99a56cbc5c6a907 199 Gene3D G3DSA:1.10.150.20 95 181 2.1E-13 T 12-10-2018 M634_10770 dfa0f37de1a8783ef99a56cbc5c6a907 199 Pfam PF04994 TfoX C-terminal domain 95 173 1.3E-19 T 12-10-2018 IPR007077 TfoX, C-terminal M634_10770 dfa0f37de1a8783ef99a56cbc5c6a907 199 Pfam PF04993 TfoX N-terminal domain 1 81 4.7E-12 T 12-10-2018 IPR007076 TfoX, N-terminal M634_10770 dfa0f37de1a8783ef99a56cbc5c6a907 199 Gene3D G3DSA:3.30.1460.30 1 83 9.0E-14 T 12-10-2018 M634_10770 dfa0f37de1a8783ef99a56cbc5c6a907 199 SUPERFAMILY SSF159894 1 81 2.88E-12 T 12-10-2018 M634_19590 228a28edff059aa7907b0dc597924338 323 Pfam PF07968 Leukocidin/Hemolysin toxin family 74 316 2.1E-8 T 12-10-2018 IPR016183 Leukocidin/Hemolysin toxin GO:0005576|GO:0051715 M634_19590 228a28edff059aa7907b0dc597924338 323 SUPERFAMILY SSF56959 23 321 3.27E-67 T 12-10-2018 IPR036435 Leukocidin/porin MspA superfamily M634_19590 228a28edff059aa7907b0dc597924338 323 Gene3D G3DSA:2.70.240.10 37 323 1.4E-12 T 12-10-2018 M634_23935 5956b468bdd15df39147cc98338c9e54 295 SUPERFAMILY SSF46785 7 88 1.67E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_23935 5956b468bdd15df39147cc98338c9e54 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 3.1E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_23935 5956b468bdd15df39147cc98338c9e54 295 Pfam PF03466 LysR substrate binding domain 88 289 1.3E-28 T 12-10-2018 IPR005119 LysR, substrate-binding M634_23935 5956b468bdd15df39147cc98338c9e54 295 Gene3D G3DSA:3.40.190.10 92 286 1.9E-41 T 12-10-2018 M634_23935 5956b468bdd15df39147cc98338c9e54 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.9E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_23935 5956b468bdd15df39147cc98338c9e54 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.9E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_23935 5956b468bdd15df39147cc98338c9e54 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.9E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_23935 5956b468bdd15df39147cc98338c9e54 295 SUPERFAMILY SSF53850 89 291 1.81E-29 T 12-10-2018 M634_23935 5956b468bdd15df39147cc98338c9e54 295 Gene3D G3DSA:3.40.190.10 164 261 1.9E-41 T 12-10-2018 M634_23935 5956b468bdd15df39147cc98338c9e54 295 Gene3D G3DSA:1.10.10.10 3 89 8.2E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_19365 85227445f2c7fd221a298961526dbdf8 372 Pfam PF00005 ABC transporter 23 165 2.4E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_19365 85227445f2c7fd221a298961526dbdf8 372 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_19365 85227445f2c7fd221a298961526dbdf8 372 SUPERFAMILY SSF50331 240 355 4.33E-12 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal M634_19365 85227445f2c7fd221a298961526dbdf8 372 SUPERFAMILY SSF52540 8 247 1.6E-85 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_19365 85227445f2c7fd221a298961526dbdf8 372 TIGRFAM TIGR03265 PhnT2: putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein 5 357 4.8E-161 T 12-10-2018 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 GO:0005524 M634_19365 85227445f2c7fd221a298961526dbdf8 372 Gene3D G3DSA:3.40.50.300 7 225 1.0E-68 T 12-10-2018 M634_19365 85227445f2c7fd221a298961526dbdf8 372 SMART SM00382 32 215 1.8E-20 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_19365 85227445f2c7fd221a298961526dbdf8 372 Pfam PF08402 TOBE domain 279 349 4.8E-5 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 M634_19365 85227445f2c7fd221a298961526dbdf8 372 Gene3D G3DSA:2.40.50.940 226 285 2.6E-16 T 12-10-2018 M634_19365 85227445f2c7fd221a298961526dbdf8 372 Gene3D G3DSA:2.40.50.140 286 330 2.6E-16 T 12-10-2018 M634_12330 87bc4e74cd8f8809640aad2ed5a5e764 391 Pfam PF13176 Tetratricopeptide repeat 71 94 0.021 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_12330 87bc4e74cd8f8809640aad2ed5a5e764 391 Gene3D G3DSA:1.25.40.10 22 177 1.5E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_12330 87bc4e74cd8f8809640aad2ed5a5e764 391 Gene3D G3DSA:1.25.40.10 178 350 7.9E-17 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_12330 87bc4e74cd8f8809640aad2ed5a5e764 391 Pfam PF14559 Tetratricopeptide repeat 194 248 2.5E-6 T 12-10-2018 M634_12330 87bc4e74cd8f8809640aad2ed5a5e764 391 SUPERFAMILY SSF81901 39 270 8.11E-22 T 12-10-2018 M634_12330 87bc4e74cd8f8809640aad2ed5a5e764 391 SMART SM00028 35 68 270.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_12330 87bc4e74cd8f8809640aad2ed5a5e764 391 SMART SM00028 69 102 81.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_12330 87bc4e74cd8f8809640aad2ed5a5e764 391 SMART SM00028 182 215 0.099 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_12330 87bc4e74cd8f8809640aad2ed5a5e764 391 SMART SM00028 216 249 4.8 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_12330 87bc4e74cd8f8809640aad2ed5a5e764 391 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 389 36.81 T 12-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 M634_00120 a62113938c9df315730818a1c9f30bd3 154 Gene3D G3DSA:1.10.10.10 3 89 3.4E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_00120 a62113938c9df315730818a1c9f30bd3 154 SUPERFAMILY SSF46785 11 144 2.2E-35 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_00120 a62113938c9df315730818a1c9f30bd3 154 Gene3D G3DSA:3.30.1490.190 90 150 2.4E-16 T 12-10-2018 M634_00120 a62113938c9df315730818a1c9f30bd3 154 Pfam PF01475 Ferric uptake regulator family 19 138 1.4E-19 T 12-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 M634_22635 b0639333b9ac4645cdd223205b6aba28 285 SMART SM00342 191 274 8.3E-27 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_22635 b0639333b9ac4645cdd223205b6aba28 285 SUPERFAMILY SSF46689 227 277 8.96E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_22635 b0639333b9ac4645cdd223205b6aba28 285 SUPERFAMILY SSF46689 174 225 3.23E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_22635 b0639333b9ac4645cdd223205b6aba28 285 SUPERFAMILY SSF51215 28 162 4.05E-19 T 12-10-2018 IPR037923 Transcription regulator HTH-like M634_22635 b0639333b9ac4645cdd223205b6aba28 285 Gene3D G3DSA:1.10.10.60 171 282 8.0E-26 T 12-10-2018 M634_22635 b0639333b9ac4645cdd223205b6aba28 285 Pfam PF12833 Helix-turn-helix domain 198 275 6.5E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_22635 b0639333b9ac4645cdd223205b6aba28 285 Gene3D G3DSA:2.60.120.280 30 141 2.1E-9 T 12-10-2018 M634_22635 b0639333b9ac4645cdd223205b6aba28 285 Pfam PF02311 AraC-like ligand binding domain 33 107 4.3E-5 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 M634_13360 e4568353af480a1358d279c7941ad5dc 337 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 333 36.409 T 12-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 M634_13360 e4568353af480a1358d279c7941ad5dc 337 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 334 2.9E-129 T 12-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 M634_13360 e4568353af480a1358d279c7941ad5dc 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 319 6.3E-62 T 12-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 M634_13360 e4568353af480a1358d279c7941ad5dc 337 SUPERFAMILY SSF51735 5 159 1.2E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_13360 e4568353af480a1358d279c7941ad5dc 337 Gene3D G3DSA:3.30.360.10 130 316 3.1E-153 T 12-10-2018 M634_13360 e4568353af480a1358d279c7941ad5dc 337 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 232 246 - T 12-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 M634_13360 e4568353af480a1358d279c7941ad5dc 337 SUPERFAMILY SSF55347 131 320 1.7E-78 T 12-10-2018 M634_13360 e4568353af480a1358d279c7941ad5dc 337 SMART SM00859 6 121 2.7E-41 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 M634_13360 e4568353af480a1358d279c7941ad5dc 337 Gene3D G3DSA:3.40.50.720 7 330 3.1E-153 T 12-10-2018 M634_13360 e4568353af480a1358d279c7941ad5dc 337 PIRSF PIRSF000148 4 337 1.5E-134 T 12-10-2018 M634_13360 e4568353af480a1358d279c7941ad5dc 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 120 6.6E-32 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 M634_07860 62da1f83d95a0895bbca6f650cf8bb58 553 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 552 20.23 T 12-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 M634_07860 62da1f83d95a0895bbca6f650cf8bb58 553 Gene3D G3DSA:3.40.50.2030 383 551 6.0E-61 T 12-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 M634_07860 62da1f83d95a0895bbca6f650cf8bb58 553 Gene3D G3DSA:3.40.50.2030 237 382 1.1E-63 T 12-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 M634_07860 62da1f83d95a0895bbca6f650cf8bb58 553 Pfam PF03063 Prismane/CO dehydrogenase family 1 548 2.6E-163 T 12-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 M634_07860 62da1f83d95a0895bbca6f650cf8bb58 553 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 551 2.8E-226 T 12-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 M634_07860 62da1f83d95a0895bbca6f650cf8bb58 553 Gene3D G3DSA:1.20.1270.20 153 235 6.6E-29 T 12-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 M634_07860 62da1f83d95a0895bbca6f650cf8bb58 553 SUPERFAMILY SSF56821 1 551 5.23E-196 T 12-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 M634_07860 62da1f83d95a0895bbca6f650cf8bb58 553 PIRSF PIRSF000076 1 553 1.6E-244 T 12-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 M634_07860 62da1f83d95a0895bbca6f650cf8bb58 553 Gene3D G3DSA:1.20.1270.20 1 143 8.3E-38 T 12-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 M634_09255 44bcdcae7c978d2d43ea0e879d66100e 516 SMART SM00020 33 260 2.2E-61 T 12-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 M634_09255 44bcdcae7c978d2d43ea0e879d66100e 516 Gene3D G3DSA:2.40.10.10 34 254 8.6E-60 T 12-10-2018 M634_09255 44bcdcae7c978d2d43ea0e879d66100e 516 Pfam PF02839 Carbohydrate binding domain 407 432 3.4E-5 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M634_09255 44bcdcae7c978d2d43ea0e879d66100e 516 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 72 77 - T 12-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 M634_09255 44bcdcae7c978d2d43ea0e879d66100e 516 SUPERFAMILY SSF51055 387 436 8.89E-15 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M634_09255 44bcdcae7c978d2d43ea0e879d66100e 516 SUPERFAMILY SSF50494 15 265 5.93E-63 T 12-10-2018 IPR009003 Peptidase S1, PA clan M634_09255 44bcdcae7c978d2d43ea0e879d66100e 516 Gene3D G3DSA:2.10.10.20 390 433 3.0E-16 T 12-10-2018 M634_09255 44bcdcae7c978d2d43ea0e879d66100e 516 Pfam PF00089 Trypsin 34 258 6.6E-48 T 12-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 M634_09255 44bcdcae7c978d2d43ea0e879d66100e 516 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 211 222 - T 12-10-2018 IPR033116 Serine proteases, trypsin family, serine active site M634_09255 44bcdcae7c978d2d43ea0e879d66100e 516 Gene3D G3DSA:2.40.10.10 46 255 8.6E-60 T 12-10-2018 M634_09255 44bcdcae7c978d2d43ea0e879d66100e 516 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 118 132 2.0E-11 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 M634_09255 44bcdcae7c978d2d43ea0e879d66100e 516 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 62 77 2.0E-11 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 M634_09255 44bcdcae7c978d2d43ea0e879d66100e 516 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 210 222 2.0E-11 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 M634_09255 44bcdcae7c978d2d43ea0e879d66100e 516 SMART SM00495 390 435 2.1E-12 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M634_09255 44bcdcae7c978d2d43ea0e879d66100e 516 SMART SM00495 461 512 0.0026 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M634_09255 44bcdcae7c978d2d43ea0e879d66100e 516 Gene3D G3DSA:2.60.40.10 275 382 9.7E-8 T 12-10-2018 IPR013783 Immunoglobulin-like fold M634_06125 0e9a3acdb748a8369aa93bf65bf8b576 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 12-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 M634_06125 0e9a3acdb748a8369aa93bf65bf8b576 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 3.3E-75 T 12-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 M634_06125 0e9a3acdb748a8369aa93bf65bf8b576 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 9.0E-15 T 12-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 M634_06125 0e9a3acdb748a8369aa93bf65bf8b576 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 52.623 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 M634_06125 0e9a3acdb748a8369aa93bf65bf8b576 214 Gene3D G3DSA:3.40.50.300 1 214 5.0E-78 T 12-10-2018 M634_06125 0e9a3acdb748a8369aa93bf65bf8b576 214 PRINTS PR00094 Adenylate kinase signature 4 17 6.2E-36 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 M634_06125 0e9a3acdb748a8369aa93bf65bf8b576 214 PRINTS PR00094 Adenylate kinase signature 32 46 6.2E-36 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 M634_06125 0e9a3acdb748a8369aa93bf65bf8b576 214 PRINTS PR00094 Adenylate kinase signature 156 171 6.2E-36 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 M634_06125 0e9a3acdb748a8369aa93bf65bf8b576 214 PRINTS PR00094 Adenylate kinase signature 173 187 6.2E-36 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 M634_06125 0e9a3acdb748a8369aa93bf65bf8b576 214 PRINTS PR00094 Adenylate kinase signature 81 97 6.2E-36 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 M634_06125 0e9a3acdb748a8369aa93bf65bf8b576 214 Pfam PF00406 Adenylate kinase 5 185 8.5E-60 T 12-10-2018 M634_06125 0e9a3acdb748a8369aa93bf65bf8b576 214 SUPERFAMILY SSF52540 1 192 1.81E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_04805 8c4641eda80f5693cf2116e137c84833 203 SUPERFAMILY SSF52833 1 194 5.48E-66 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M634_04805 8c4641eda80f5693cf2116e137c84833 203 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 193 3.0E-8 T 12-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 M634_04805 8c4641eda80f5693cf2116e137c84833 203 Gene3D G3DSA:3.40.30.10 1 197 4.3E-72 T 12-10-2018 M634_04805 8c4641eda80f5693cf2116e137c84833 203 PIRSF PIRSF000239 1 201 2.1E-58 T 12-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 M634_04805 8c4641eda80f5693cf2116e137c84833 203 Pfam PF00578 AhpC/TSA family 4 139 8.0E-34 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 M634_12045 8cf3d1d5dcd65f54b2af7dfd1a9c0dd7 433 Gene3D G3DSA:1.10.3860.10 14 432 4.7E-117 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 M634_12045 8cf3d1d5dcd65f54b2af7dfd1a9c0dd7 433 PRINTS PR00173 Glutamate-aspartate symporter signature 244 263 9.6E-53 T 12-10-2018 M634_12045 8cf3d1d5dcd65f54b2af7dfd1a9c0dd7 433 PRINTS PR00173 Glutamate-aspartate symporter signature 161 183 9.6E-53 T 12-10-2018 M634_12045 8cf3d1d5dcd65f54b2af7dfd1a9c0dd7 433 PRINTS PR00173 Glutamate-aspartate symporter signature 21 41 9.6E-53 T 12-10-2018 M634_12045 8cf3d1d5dcd65f54b2af7dfd1a9c0dd7 433 PRINTS PR00173 Glutamate-aspartate symporter signature 346 365 9.6E-53 T 12-10-2018 M634_12045 8cf3d1d5dcd65f54b2af7dfd1a9c0dd7 433 PRINTS PR00173 Glutamate-aspartate symporter signature 209 228 9.6E-53 T 12-10-2018 M634_12045 8cf3d1d5dcd65f54b2af7dfd1a9c0dd7 433 PRINTS PR00173 Glutamate-aspartate symporter signature 372 392 9.6E-53 T 12-10-2018 M634_12045 8cf3d1d5dcd65f54b2af7dfd1a9c0dd7 433 PRINTS PR00173 Glutamate-aspartate symporter signature 62 82 9.6E-53 T 12-10-2018 M634_12045 8cf3d1d5dcd65f54b2af7dfd1a9c0dd7 433 PRINTS PR00173 Glutamate-aspartate symporter signature 311 337 9.6E-53 T 12-10-2018 M634_12045 8cf3d1d5dcd65f54b2af7dfd1a9c0dd7 433 PRINTS PR00173 Glutamate-aspartate symporter signature 92 117 9.6E-53 T 12-10-2018 M634_12045 8cf3d1d5dcd65f54b2af7dfd1a9c0dd7 433 SUPERFAMILY SSF118215 29 417 9.02E-110 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 M634_12045 8cf3d1d5dcd65f54b2af7dfd1a9c0dd7 433 Pfam PF00375 Sodium:dicarboxylate symporter family 29 417 8.2E-119 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 M634_06540 81a7a214dcd7248e9bf0a81dc8f1f31c 985 Pfam PF05547 Immune inhibitor A peptidase M6 160 367 4.9E-15 T 12-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 M634_06540 81a7a214dcd7248e9bf0a81dc8f1f31c 985 ProSitePatterns PS00018 EF-hand calcium-binding domain. 238 250 - T 12-10-2018 IPR018247 EF-Hand 1, calcium-binding site M634_06540 81a7a214dcd7248e9bf0a81dc8f1f31c 985 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 964 984 3.5E-4 T 12-10-2018 IPR020008 GlyGly-CTERM domain M634_06540 81a7a214dcd7248e9bf0a81dc8f1f31c 985 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 138 426 3.2E-74 T 12-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 M634_06540 81a7a214dcd7248e9bf0a81dc8f1f31c 985 SUPERFAMILY SSF49299 766 862 1.84E-6 T 12-10-2018 IPR035986 PKD domain superfamily M634_06540 81a7a214dcd7248e9bf0a81dc8f1f31c 985 Gene3D G3DSA:2.60.40.10 764 860 3.8E-17 T 12-10-2018 IPR013783 Immunoglobulin-like fold M634_06540 81a7a214dcd7248e9bf0a81dc8f1f31c 985 SMART SM00089 770 862 5.2E-4 T 12-10-2018 IPR022409 PKD/Chitinase domain M634_06540 81a7a214dcd7248e9bf0a81dc8f1f31c 985 PIRSF PIRSF036597 1 985 0.0 T 12-10-2018 IPR012045 Peptidase M6, unassigned InhA-related M634_06540 81a7a214dcd7248e9bf0a81dc8f1f31c 985 SUPERFAMILY SSF55486 283 349 5.07E-7 T 12-10-2018 M634_20125 ad6cef080ebbf1cecb6f25fb280a74c6 218 SUPERFAMILY SSF51182 2 128 2.58E-37 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily M634_20125 ad6cef080ebbf1cecb6f25fb280a74c6 218 Gene3D G3DSA:2.60.120.10 1 215 6.8E-80 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M634_20125 ad6cef080ebbf1cecb6f25fb280a74c6 218 SUPERFAMILY SSF51182 115 216 1.04E-25 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily M634_20125 ad6cef080ebbf1cecb6f25fb280a74c6 218 Pfam PF12973 ChrR Cupin-like domain 126 211 2.3E-29 T 12-10-2018 IPR025979 ChrR-like cupin domain M634_20125 ad6cef080ebbf1cecb6f25fb280a74c6 218 Pfam PF12973 ChrR Cupin-like domain 18 108 7.5E-39 T 12-10-2018 IPR025979 ChrR-like cupin domain M634_09200 d4d283de2557f4259fea848f1dfc339c 508 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 18 444 1.2E-140 T 12-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane M634_00815 4bae10fd0a560bbf2e817b1d048d82d7 202 SUPERFAMILY SSF54719 88 200 4.58E-44 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M634_00815 4bae10fd0a560bbf2e817b1d048d82d7 202 Gene3D G3DSA:2.40.500.20 84 201 2.1E-48 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M634_00815 4bae10fd0a560bbf2e817b1d048d82d7 202 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 163 170 - T 12-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M634_00815 4bae10fd0a560bbf2e817b1d048d82d7 202 SUPERFAMILY SSF46609 1 86 3.01E-30 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M634_00815 4bae10fd0a560bbf2e817b1d048d82d7 202 PIRSF PIRSF000349 1 202 6.6E-81 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M634_00815 4bae10fd0a560bbf2e817b1d048d82d7 202 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 92 195 4.9E-40 T 12-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M634_00815 4bae10fd0a560bbf2e817b1d048d82d7 202 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.1E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M634_00815 4bae10fd0a560bbf2e817b1d048d82d7 202 PRINTS PR01703 Manganese superoxide dismutase signature 68 81 1.1E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M634_00815 4bae10fd0a560bbf2e817b1d048d82d7 202 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.1E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M634_00815 4bae10fd0a560bbf2e817b1d048d82d7 202 PRINTS PR01703 Manganese superoxide dismutase signature 161 173 1.1E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M634_00815 4bae10fd0a560bbf2e817b1d048d82d7 202 PRINTS PR01703 Manganese superoxide dismutase signature 121 129 1.1E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M634_00815 4bae10fd0a560bbf2e817b1d048d82d7 202 Gene3D G3DSA:1.10.287.990 20 83 2.2E-24 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M634_00815 4bae10fd0a560bbf2e817b1d048d82d7 202 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 85 9.1E-28 T 12-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M634_18510 7152e3e33fdcf38bd379d70c4bb7e5c6 382 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 13 380 4.2E-230 T 12-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 M634_18510 7152e3e33fdcf38bd379d70c4bb7e5c6 382 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 39 165 9.3E-26 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 M634_18510 7152e3e33fdcf38bd379d70c4bb7e5c6 382 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 72 86 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 M634_18510 7152e3e33fdcf38bd379d70c4bb7e5c6 382 SUPERFAMILY SSF51735 171 345 1.71E-50 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_18510 7152e3e33fdcf38bd379d70c4bb7e5c6 382 Gene3D G3DSA:3.90.180.10 17 375 2.6E-153 T 12-10-2018 M634_18510 7152e3e33fdcf38bd379d70c4bb7e5c6 382 Pfam PF00107 Zinc-binding dehydrogenase 208 337 5.1E-27 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 M634_18510 7152e3e33fdcf38bd379d70c4bb7e5c6 382 Gene3D G3DSA:3.40.50.720 185 323 2.6E-153 T 12-10-2018 M634_18510 7152e3e33fdcf38bd379d70c4bb7e5c6 382 SUPERFAMILY SSF50129 329 379 1.41E-11 T 12-10-2018 IPR011032 GroES-like superfamily M634_18510 7152e3e33fdcf38bd379d70c4bb7e5c6 382 SMART SM00829 23 378 0.0011 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 M634_18510 7152e3e33fdcf38bd379d70c4bb7e5c6 382 SUPERFAMILY SSF50129 10 196 4.42E-72 T 12-10-2018 IPR011032 GroES-like superfamily M634_14255 0563eec5045d08dd731e5f221e7df890 715 SUPERFAMILY SSF52540 20 454 1.75E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_14255 0563eec5045d08dd731e5f221e7df890 715 Gene3D G3DSA:1.10.10.1020 13 134 2.8E-22 T 12-10-2018 M634_14255 0563eec5045d08dd731e5f221e7df890 715 SUPERFAMILY SSF52540 374 713 1.06E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_14255 0563eec5045d08dd731e5f221e7df890 715 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 18 713 3.6E-217 T 12-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 M634_14255 0563eec5045d08dd731e5f221e7df890 715 Gene3D G3DSA:3.40.50.300 216 449 1.9E-75 T 12-10-2018 M634_14255 0563eec5045d08dd731e5f221e7df890 715 Pfam PF13604 AAA domain 248 409 2.4E-30 T 12-10-2018 M634_14255 0563eec5045d08dd731e5f221e7df890 715 Gene3D G3DSA:3.40.50.300 459 579 1.3E-26 T 12-10-2018 M634_14255 0563eec5045d08dd731e5f221e7df890 715 Gene3D G3DSA:3.40.50.300 580 702 1.0E-25 T 12-10-2018 M634_14255 0563eec5045d08dd731e5f221e7df890 715 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 27 711 50.214 T 12-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 M634_14255 0563eec5045d08dd731e5f221e7df890 715 Pfam PF13538 UvrD-like helicase C-terminal domain 642 688 1.2E-14 T 12-10-2018 IPR027785 UvrD-like helicase C-terminal domain M634_04540 34d06cbd9da5c31cdd45f3fd417dbfe7 311 SMART SM00904 183 307 9.5E-64 T 12-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 M634_04540 34d06cbd9da5c31cdd45f3fd417dbfe7 311 Gene3D G3DSA:3.40.50.620 1 187 4.7E-62 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M634_04540 34d06cbd9da5c31cdd45f3fd417dbfe7 311 Gene3D G3DSA:2.40.30.30 188 311 3.5E-40 T 12-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 M634_04540 34d06cbd9da5c31cdd45f3fd417dbfe7 311 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 307 4.9E-108 T 12-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 M634_04540 34d06cbd9da5c31cdd45f3fd417dbfe7 311 SUPERFAMILY SSF82114 174 309 3.49E-45 T 12-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 M634_04540 34d06cbd9da5c31cdd45f3fd417dbfe7 311 Pfam PF06574 FAD synthetase 13 167 2.1E-59 T 12-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 M634_04540 34d06cbd9da5c31cdd45f3fd417dbfe7 311 Pfam PF01687 Riboflavin kinase 184 306 7.2E-39 T 12-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 M634_04540 34d06cbd9da5c31cdd45f3fd417dbfe7 311 SUPERFAMILY SSF52374 16 175 2.67E-36 T 12-10-2018 M634_04540 34d06cbd9da5c31cdd45f3fd417dbfe7 311 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 18 56 1.8E-8 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 M634_04540 34d06cbd9da5c31cdd45f3fd417dbfe7 311 PIRSF PIRSF004491 1 311 3.4E-107 T 12-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 M634_06230 305b259e68a77dd8f95f064831f4ab21 114 Gene3D G3DSA:1.20.1300.10 1 114 4.3E-28 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M634_06230 305b259e68a77dd8f95f064831f4ab21 114 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 10 101 2.6E-6 T 12-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M634_06230 305b259e68a77dd8f95f064831f4ab21 114 PIRSF PIRSF000169 1 114 1.1E-37 T 12-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 M634_06230 305b259e68a77dd8f95f064831f4ab21 114 SUPERFAMILY SSF81343 4 113 9.16E-26 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M634_06230 305b259e68a77dd8f95f064831f4ab21 114 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 112 5.2E-35 T 12-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 M634_14965 dc344747055f79be1d15627b6a18a2e1 637 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 M634_14965 dc344747055f79be1d15627b6a18a2e1 637 SUPERFAMILY SSF51230 1 94 6.15E-24 T 12-10-2018 IPR011053 Single hybrid motif M634_14965 dc344747055f79be1d15627b6a18a2e1 637 Pfam PF00364 Biotin-requiring enzyme 105 175 3.4E-20 T 12-10-2018 IPR000089 Biotin/lipoyl attachment M634_14965 dc344747055f79be1d15627b6a18a2e1 637 Pfam PF00364 Biotin-requiring enzyme 4 73 4.6E-21 T 12-10-2018 IPR000089 Biotin/lipoyl attachment M634_14965 dc344747055f79be1d15627b6a18a2e1 637 Pfam PF00364 Biotin-requiring enzyme 204 274 2.0E-21 T 12-10-2018 IPR000089 Biotin/lipoyl attachment M634_14965 dc344747055f79be1d15627b6a18a2e1 637 Gene3D G3DSA:3.30.559.10 390 637 6.0E-97 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 M634_14965 dc344747055f79be1d15627b6a18a2e1 637 SUPERFAMILY SSF51230 104 196 8.51E-23 T 12-10-2018 IPR011053 Single hybrid motif M634_14965 dc344747055f79be1d15627b6a18a2e1 637 Gene3D G3DSA:4.10.320.10 331 376 9.0E-21 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 M634_14965 dc344747055f79be1d15627b6a18a2e1 637 Gene3D G3DSA:2.40.50.100 104 181 6.3E-20 T 12-10-2018 M634_14965 dc344747055f79be1d15627b6a18a2e1 637 Gene3D G3DSA:2.40.50.100 202 279 1.3E-20 T 12-10-2018 M634_14965 dc344747055f79be1d15627b6a18a2e1 637 Gene3D G3DSA:2.40.50.100 1 80 8.6E-22 T 12-10-2018 M634_14965 dc344747055f79be1d15627b6a18a2e1 637 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 406 636 4.9E-80 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 M634_14965 dc344747055f79be1d15627b6a18a2e1 637 SUPERFAMILY SSF52777 395 636 2.85E-81 T 12-10-2018 M634_14965 dc344747055f79be1d15627b6a18a2e1 637 SUPERFAMILY SSF47005 326 370 9.81E-13 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 M634_14965 dc344747055f79be1d15627b6a18a2e1 637 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 226 255 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 M634_14965 dc344747055f79be1d15627b6a18a2e1 637 Pfam PF02817 e3 binding domain 332 366 3.4E-14 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 M634_14965 dc344747055f79be1d15627b6a18a2e1 637 SUPERFAMILY SSF51230 203 294 1.03E-22 T 12-10-2018 IPR011053 Single hybrid motif M634_14965 dc344747055f79be1d15627b6a18a2e1 637 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 182 637 1.0E-208 T 12-10-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 M634_14965 dc344747055f79be1d15627b6a18a2e1 637 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 127 156 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 M634_24535 5cf43b7ce1178dee040b57bb0cce50b1 189 ProDom PD006802 DIRECT HEMOLYSIN THERMOSTABLE CYTOLYSIS TOXIN HEMOLYSIS PRECURSOR SIGNAL SEQUENCING TDH-RELATED 25 189 6.0E-88 T 12-10-2018 IPR005015 Thermostable direct haemolysin, vibrio GO:0005576|GO:0019836 M634_24535 5cf43b7ce1178dee040b57bb0cce50b1 189 Pfam PF03347 Vibrio thermostable direct hemolysin 25 188 3.6E-109 T 12-10-2018 IPR005015 Thermostable direct haemolysin, vibrio GO:0005576|GO:0019836 M634_24535 5cf43b7ce1178dee040b57bb0cce50b1 189 Gene3D G3DSA:2.60.270.30 25 189 8.3E-101 T 12-10-2018 IPR038689 Thermostable direct haemolysin superfamily M634_03365 66bf604a6395b32ef031fc55bd014857 167 Gene3D G3DSA:3.30.160.20 2 73 1.2E-31 T 12-10-2018 M634_03365 66bf604a6395b32ef031fc55bd014857 167 Pfam PF00333 Ribosomal protein S5, N-terminal domain 12 75 6.1E-29 T 12-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 M634_03365 66bf604a6395b32ef031fc55bd014857 167 SUPERFAMILY SSF54768 8 76 5.86E-24 T 12-10-2018 M634_03365 66bf604a6395b32ef031fc55bd014857 167 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 3.0E-69 T 12-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 M634_03365 66bf604a6395b32ef031fc55bd014857 167 SUPERFAMILY SSF54211 80 159 4.05E-27 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M634_03365 66bf604a6395b32ef031fc55bd014857 167 Pfam PF03719 Ribosomal protein S5, C-terminal domain 88 158 2.6E-30 T 12-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 M634_03365 66bf604a6395b32ef031fc55bd014857 167 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 164 34.556 T 12-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 M634_03365 66bf604a6395b32ef031fc55bd014857 167 ProSitePatterns PS00585 Ribosomal protein S5 signature. 29 61 - T 12-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site M634_03365 66bf604a6395b32ef031fc55bd014857 167 Gene3D G3DSA:3.30.230.10 75 167 6.2E-37 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M634_05350 ce1218eeeb051853739f03ad78af3ab5 621 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 12-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 M634_05350 ce1218eeeb051853739f03ad78af3ab5 621 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 619 9.0E-303 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 M634_05350 ce1218eeeb051853739f03ad78af3ab5 621 SUPERFAMILY SSF52922 492 619 3.93E-33 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 M634_05350 ce1218eeeb051853739f03ad78af3ab5 621 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 620 45.952 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 M634_05350 ce1218eeeb051853739f03ad78af3ab5 621 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 M634_05350 ce1218eeeb051853739f03ad78af3ab5 621 Pfam PF02780 Transketolase, C-terminal domain 495 611 2.1E-28 T 12-10-2018 IPR033248 Transketolase, C-terminal domain M634_05350 ce1218eeeb051853739f03ad78af3ab5 621 SMART SM00861 319 483 4.1E-63 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain M634_05350 ce1218eeeb051853739f03ad78af3ab5 621 SUPERFAMILY SSF52518 9 381 2.66E-76 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold M634_05350 ce1218eeeb051853739f03ad78af3ab5 621 Pfam PF02779 Transketolase, pyrimidine binding domain 319 478 1.4E-36 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain M634_05350 ce1218eeeb051853739f03ad78af3ab5 621 SUPERFAMILY SSF52518 317 504 1.3E-57 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold M634_05350 ce1218eeeb051853739f03ad78af3ab5 621 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 14 282 9.8E-119 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 M634_05350 ce1218eeeb051853739f03ad78af3ab5 621 Gene3D G3DSA:3.40.50.970 317 489 1.1E-64 T 12-10-2018 M634_05350 ce1218eeeb051853739f03ad78af3ab5 621 Gene3D G3DSA:3.40.50.920 495 621 6.7E-46 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 M634_15890 ca892d7100e074bdc15d0186497f0e86 95 Gene3D G3DSA:3.30.160.100 1 95 5.2E-39 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like M634_15890 ca892d7100e074bdc15d0186497f0e86 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 4.6E-34 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 M634_15890 ca892d7100e074bdc15d0186497f0e86 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 93 8.7E-29 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 M634_15890 ca892d7100e074bdc15d0186497f0e86 95 SUPERFAMILY SSF69754 1 95 4.05E-35 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like M634_14385 ace9b50fb127d99b35c632ba00a71063 353 Pfam PF16363 GDP-mannose 4,6 dehydratase 9 329 2.5E-58 T 12-10-2018 IPR016040 NAD(P)-binding domain M634_14385 ace9b50fb127d99b35c632ba00a71063 353 Gene3D G3DSA:3.90.25.10 199 334 1.5E-142 T 12-10-2018 M634_14385 ace9b50fb127d99b35c632ba00a71063 353 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 7 340 1.2E-139 T 12-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 M634_14385 ace9b50fb127d99b35c632ba00a71063 353 SUPERFAMILY SSF51735 7 341 8.95E-97 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_14385 ace9b50fb127d99b35c632ba00a71063 353 Gene3D G3DSA:3.40.50.720 8 279 1.5E-142 T 12-10-2018 M634_14385 ace9b50fb127d99b35c632ba00a71063 353 PRINTS PR01713 Nucleotide sugar epimerase signature 300 317 1.1E-5 T 12-10-2018 M634_14385 ace9b50fb127d99b35c632ba00a71063 353 PRINTS PR01713 Nucleotide sugar epimerase signature 236 251 1.1E-5 T 12-10-2018 M634_14385 ace9b50fb127d99b35c632ba00a71063 353 PRINTS PR01713 Nucleotide sugar epimerase signature 261 276 1.1E-5 T 12-10-2018 M634_19635 de63919159fd892309fca245d5b4abc1 803 Pfam PF07971 Glycosyl hydrolase family 92 247 793 6.4E-144 T 12-10-2018 IPR012939 Glycosyl hydrolase family 92 M634_19635 de63919159fd892309fca245d5b4abc1 803 Gene3D G3DSA:1.20.1050.60 358 462 1.1E-214 T 12-10-2018 M634_19635 de63919159fd892309fca245d5b4abc1 803 SUPERFAMILY SSF48208 269 777 2.04E-39 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 M634_19635 de63919159fd892309fca245d5b4abc1 803 Gene3D G3DSA:2.70.98.10 27 357 1.1E-214 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 M634_19635 de63919159fd892309fca245d5b4abc1 803 Gene3D G3DSA:1.20.1610.10 463 669 1.1E-214 T 12-10-2018 M634_19635 de63919159fd892309fca245d5b4abc1 803 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 22 531 1.1E-109 T 12-10-2018 IPR005887 Alpha-1,2-mannosidase, putative M634_19635 de63919159fd892309fca245d5b4abc1 803 Gene3D G3DSA:3.30.2080.10 304 794 1.1E-214 T 12-10-2018 M634_13560 8f53a4f75eccb81c0e9a8d16030b91f3 244 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 19 238 6.3E-87 T 12-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 M634_13560 8f53a4f75eccb81c0e9a8d16030b91f3 244 Pfam PF04539 Sigma-70 region 3 100 161 6.9E-12 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 M634_13560 8f53a4f75eccb81c0e9a8d16030b91f3 244 SUPERFAMILY SSF88946 6 91 3.79E-24 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 M634_13560 8f53a4f75eccb81c0e9a8d16030b91f3 244 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 237 1.3E-32 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 M634_13560 8f53a4f75eccb81c0e9a8d16030b91f3 244 PRINTS PR00046 Major sigma-70 factor signature 46 59 3.8E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M634_13560 8f53a4f75eccb81c0e9a8d16030b91f3 244 PRINTS PR00046 Major sigma-70 factor signature 207 222 3.8E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M634_13560 8f53a4f75eccb81c0e9a8d16030b91f3 244 PRINTS PR00046 Major sigma-70 factor signature 222 233 3.8E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M634_13560 8f53a4f75eccb81c0e9a8d16030b91f3 244 PRINTS PR00046 Major sigma-70 factor signature 190 202 3.8E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M634_13560 8f53a4f75eccb81c0e9a8d16030b91f3 244 PIRSF PIRSF000770 2 243 1.0E-39 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M634_13560 8f53a4f75eccb81c0e9a8d16030b91f3 244 Gene3D G3DSA:1.20.140.160 90 239 7.6E-46 T 12-10-2018 M634_13560 8f53a4f75eccb81c0e9a8d16030b91f3 244 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 7 240 62.854 T 12-10-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 M634_13560 8f53a4f75eccb81c0e9a8d16030b91f3 244 Gene3D G3DSA:1.10.1740.10 5 88 2.1E-28 T 12-10-2018 M634_13560 8f53a4f75eccb81c0e9a8d16030b91f3 244 SUPERFAMILY SSF88659 155 239 9.53E-21 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like M634_13560 8f53a4f75eccb81c0e9a8d16030b91f3 244 Pfam PF04542 Sigma-70 region 2 19 91 5.0E-16 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 M634_13560 8f53a4f75eccb81c0e9a8d16030b91f3 244 SUPERFAMILY SSF88659 92 164 5.23E-16 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like M634_13560 8f53a4f75eccb81c0e9a8d16030b91f3 244 Pfam PF04545 Sigma-70, region 4 187 234 2.7E-19 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 M634_13965 07700cdd6c3bed3c9276e52ab982a001 251 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 11 239 39.576 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 M634_13965 07700cdd6c3bed3c9276e52ab982a001 251 Gene3D G3DSA:3.40.1180.10 1 239 1.9E-93 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 M634_13965 07700cdd6c3bed3c9276e52ab982a001 251 Pfam PF01255 Putative undecaprenyl diphosphate synthase 18 238 3.3E-80 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 M634_13965 07700cdd6c3bed3c9276e52ab982a001 251 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 11 238 1.2E-93 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 M634_13965 07700cdd6c3bed3c9276e52ab982a001 251 SUPERFAMILY SSF64005 9 234 2.75E-87 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 M634_13965 07700cdd6c3bed3c9276e52ab982a001 251 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 184 201 - T 12-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 M634_15185 e683cea7cb0667b3d31165fd5eb7b62b 853 SUPERFAMILY SSF48334 267 564 2.75E-93 T 12-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily M634_15185 e683cea7cb0667b3d31165fd5eb7b62b 853 Gene3D G3DSA:3.40.1170.10 1 121 6.7E-52 T 12-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 M634_15185 e683cea7cb0667b3d31165fd5eb7b62b 853 Pfam PF05192 MutS domain III 269 558 1.4E-40 T 12-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 M634_15185 e683cea7cb0667b3d31165fd5eb7b62b 853 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 7 851 0.0 T 12-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 M634_15185 e683cea7cb0667b3d31165fd5eb7b62b 853 SMART SM00534 606 793 8.5E-118 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 M634_15185 e683cea7cb0667b3d31165fd5eb7b62b 853 PIRSF PIRSF037677 194 832 7.2E-131 T 12-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 M634_15185 e683cea7cb0667b3d31165fd5eb7b62b 853 PIRSF PIRSF037677 1 180 5.6E-27 T 12-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 M634_15185 e683cea7cb0667b3d31165fd5eb7b62b 853 Gene3D G3DSA:1.10.1420.10 386 502 4.3E-105 T 12-10-2018 M634_15185 e683cea7cb0667b3d31165fd5eb7b62b 853 Pfam PF05188 MutS domain II 128 253 5.0E-30 T 12-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 M634_15185 e683cea7cb0667b3d31165fd5eb7b62b 853 Gene3D G3DSA:3.30.420.110 127 261 2.4E-36 T 12-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 M634_15185 e683cea7cb0667b3d31165fd5eb7b62b 853 Gene3D G3DSA:1.10.1420.10 266 558 4.3E-105 T 12-10-2018 M634_15185 e683cea7cb0667b3d31165fd5eb7b62b 853 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 687 703 - T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 M634_15185 e683cea7cb0667b3d31165fd5eb7b62b 853 Gene3D G3DSA:3.40.50.300 567 851 3.4E-100 T 12-10-2018 M634_15185 e683cea7cb0667b3d31165fd5eb7b62b 853 SUPERFAMILY SSF53150 114 266 2.09E-41 T 12-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 M634_15185 e683cea7cb0667b3d31165fd5eb7b62b 853 Pfam PF00488 MutS domain V 609 796 2.3E-86 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 M634_15185 e683cea7cb0667b3d31165fd5eb7b62b 853 Pfam PF01624 MutS domain I 8 119 3.6E-41 T 12-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 M634_15185 e683cea7cb0667b3d31165fd5eb7b62b 853 Pfam PF05190 MutS family domain IV 427 517 1.5E-30 T 12-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 M634_15185 e683cea7cb0667b3d31165fd5eb7b62b 853 SUPERFAMILY SSF52540 566 797 4.23E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_15185 e683cea7cb0667b3d31165fd5eb7b62b 853 SUPERFAMILY SSF55271 4 113 7.85E-42 T 12-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 M634_15185 e683cea7cb0667b3d31165fd5eb7b62b 853 SMART SM00533 283 590 1.4E-109 T 12-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 M634_15185 e683cea7cb0667b3d31165fd5eb7b62b 853 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 7 845 25.251 T 12-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 M634_19395 b6564ce5d47faaca3e65020e6a67a91c 119 PIRSF PIRSF028299 1 118 5.0E-23 T 12-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 M634_19395 b6564ce5d47faaca3e65020e6a67a91c 119 Pfam PF11777 Protein of unknown function (DUF3316) 8 111 3.4E-13 T 12-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 M634_01355 7c30401d29541667a33faf7692c681ca 126 Gene3D G3DSA:3.10.450.10 40 119 4.1E-9 T 12-10-2018 M634_01355 7c30401d29541667a33faf7692c681ca 126 Pfam PF00031 Cystatin domain 45 100 6.5E-9 T 12-10-2018 IPR000010 Cystatin domain GO:0004869 M634_01355 7c30401d29541667a33faf7692c681ca 126 SUPERFAMILY SSF54403 43 115 1.02E-16 T 12-10-2018 M634_01355 7c30401d29541667a33faf7692c681ca 126 ProSitePatterns PS00287 Cysteine proteases inhibitors signature. 81 94 - T 12-10-2018 IPR018073 Proteinase inhibitor I25, cystatin, conserved site M634_00230 7940861b64bd4272859a7e6e26cc0eec 338 Gene3D G3DSA:3.30.420.40 8 325 7.3E-45 T 12-10-2018 M634_00230 7940861b64bd4272859a7e6e26cc0eec 338 Pfam PF11104 Type IV pilus assembly protein PilM; 237 326 1.8E-11 T 12-10-2018 IPR005883 Type IV pilus assembly protein PilM M634_00230 7940861b64bd4272859a7e6e26cc0eec 338 Pfam PF11104 Type IV pilus assembly protein PilM; 8 216 1.2E-39 T 12-10-2018 IPR005883 Type IV pilus assembly protein PilM M634_00230 7940861b64bd4272859a7e6e26cc0eec 338 Gene3D G3DSA:3.30.1490.300 82 141 7.3E-45 T 12-10-2018 M634_00230 7940861b64bd4272859a7e6e26cc0eec 338 Gene3D G3DSA:3.30.420.40 182 292 7.3E-45 T 12-10-2018 M634_00230 7940861b64bd4272859a7e6e26cc0eec 338 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 5 327 3.8E-73 T 12-10-2018 IPR005883 Type IV pilus assembly protein PilM M634_00230 7940861b64bd4272859a7e6e26cc0eec 338 PIRSF PIRSF019169 1 328 1.6E-93 T 12-10-2018 IPR005883 Type IV pilus assembly protein PilM M634_00230 7940861b64bd4272859a7e6e26cc0eec 338 SUPERFAMILY SSF53067 6 165 1.59E-6 T 12-10-2018 M634_07605 0daac0b748c891222f4fa6fd04ec7697 298 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 155 176 - T 12-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 M634_07605 0daac0b748c891222f4fa6fd04ec7697 298 SUPERFAMILY SSF54913 225 297 5.89E-21 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta M634_07605 0daac0b748c891222f4fa6fd04ec7697 298 Pfam PF01634 ATP phosphoribosyltransferase 53 218 9.2E-44 T 12-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 M634_07605 0daac0b748c891222f4fa6fd04ec7697 298 Gene3D G3DSA:3.40.190.10 6 219 6.0E-68 T 12-10-2018 M634_07605 0daac0b748c891222f4fa6fd04ec7697 298 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 5 298 35.157 T 12-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 M634_07605 0daac0b748c891222f4fa6fd04ec7697 298 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 6 196 6.3E-55 T 12-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 M634_07605 0daac0b748c891222f4fa6fd04ec7697 298 SUPERFAMILY SSF53850 5 222 1.71E-66 T 12-10-2018 M634_07605 0daac0b748c891222f4fa6fd04ec7697 298 Pfam PF08029 HisG, C-terminal domain 222 295 6.5E-24 T 12-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 M634_07605 0daac0b748c891222f4fa6fd04ec7697 298 Gene3D G3DSA:3.30.70.120 225 298 4.5E-33 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal M634_07605 0daac0b748c891222f4fa6fd04ec7697 298 Gene3D G3DSA:3.40.190.10 102 191 6.0E-68 T 12-10-2018 M634_07605 0daac0b748c891222f4fa6fd04ec7697 298 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 204 297 3.2E-30 T 12-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 M634_00660 03581bd37b1030b49d7bc02cef145938 510 Pfam PF01676 Metalloenzyme superfamily 5 498 8.9E-81 T 12-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 M634_00660 03581bd37b1030b49d7bc02cef145938 510 PIRSF PIRSF001492 1 510 2.1E-202 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M634_00660 03581bd37b1030b49d7bc02cef145938 510 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 5 510 49.351 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M634_00660 03581bd37b1030b49d7bc02cef145938 510 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 508 1.3E-227 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M634_00660 03581bd37b1030b49d7bc02cef145938 510 SUPERFAMILY SSF64158 78 308 1.44E-80 T 12-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M634_00660 03581bd37b1030b49d7bc02cef145938 510 Gene3D G3DSA:3.40.1450.10 78 310 1.9E-209 T 12-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M634_00660 03581bd37b1030b49d7bc02cef145938 510 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 83 297 3.3E-80 T 12-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M634_00660 03581bd37b1030b49d7bc02cef145938 510 Gene3D G3DSA:3.40.720.10 6 509 1.9E-209 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 M634_00660 03581bd37b1030b49d7bc02cef145938 510 SUPERFAMILY SSF53649 4 509 8.64E-76 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 M634_20630 a89aeaf592877405ba6b56136b75c744 329 SUPERFAMILY SSF56925 24 181 6.02E-33 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel M634_20630 a89aeaf592877405ba6b56136b75c744 329 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 301 321 2.4E-10 T 12-10-2018 M634_20630 a89aeaf592877405ba6b56136b75c744 329 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 281 300 2.4E-10 T 12-10-2018 M634_20630 a89aeaf592877405ba6b56136b75c744 329 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 263 280 2.4E-10 T 12-10-2018 M634_20630 a89aeaf592877405ba6b56136b75c744 329 ProSitePatterns PS01068 OmpA-like domain. 250 294 - T 12-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 M634_20630 a89aeaf592877405ba6b56136b75c744 329 PRINTS PR01021 OMPA domain signature 263 279 4.0E-15 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M634_20630 a89aeaf592877405ba6b56136b75c744 329 PRINTS PR01021 OMPA domain signature 218 240 4.0E-15 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M634_20630 a89aeaf592877405ba6b56136b75c744 329 PRINTS PR01021 OMPA domain signature 248 263 4.0E-15 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M634_20630 a89aeaf592877405ba6b56136b75c744 329 Gene3D G3DSA:2.40.160.20 10 203 1.6E-42 T 12-10-2018 M634_20630 a89aeaf592877405ba6b56136b75c744 329 SUPERFAMILY SSF103088 211 318 5.89E-38 T 12-10-2018 IPR036737 OmpA-like domain superfamily M634_20630 a89aeaf592877405ba6b56136b75c744 329 Gene3D G3DSA:3.30.1330.60 204 325 4.1E-44 T 12-10-2018 IPR036737 OmpA-like domain superfamily M634_20630 a89aeaf592877405ba6b56136b75c744 329 Pfam PF13505 Outer membrane protein beta-barrel domain 6 181 6.0E-24 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel M634_20630 a89aeaf592877405ba6b56136b75c744 329 Pfam PF00691 OmpA family 217 312 1.9E-24 T 12-10-2018 IPR006665 OmpA-like domain M634_14600 1b01b9d7f5b22197d2d0d764d0abd85e 177 Pfam PF02036 SCP-2 sterol transfer family 44 136 8.3E-19 T 12-10-2018 IPR003033 SCP2 sterol-binding domain M634_14600 1b01b9d7f5b22197d2d0d764d0abd85e 177 PIRSF PIRSF025550 3 176 5.3E-87 T 12-10-2018 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT M634_14600 1b01b9d7f5b22197d2d0d764d0abd85e 177 Gene3D G3DSA:3.30.1050.10 14 141 4.9E-7 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily M634_14600 1b01b9d7f5b22197d2d0d764d0abd85e 177 SUPERFAMILY SSF55718 46 141 2.59E-20 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily M634_16745 cf064b5c829d5cc6a74c6ba9490077bc 641 SMART SM00327 84 257 9.0E-5 T 12-10-2018 IPR002035 von Willebrand factor, type A M634_16745 cf064b5c829d5cc6a74c6ba9490077bc 641 Gene3D G3DSA:3.40.50.410 85 283 2.4E-32 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily M634_16745 cf064b5c829d5cc6a74c6ba9490077bc 641 SUPERFAMILY SSF48452 351 445 2.47E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_16745 cf064b5c829d5cc6a74c6ba9490077bc 641 SUPERFAMILY SSF53300 87 270 2.02E-18 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily M634_16745 cf064b5c829d5cc6a74c6ba9490077bc 641 Pfam PF13519 von Willebrand factor type A domain 88 193 5.9E-12 T 12-10-2018 IPR002035 von Willebrand factor, type A M634_16745 cf064b5c829d5cc6a74c6ba9490077bc 641 Gene3D G3DSA:1.25.40.10 339 444 7.0E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_16745 cf064b5c829d5cc6a74c6ba9490077bc 641 Pfam PF07719 Tetratricopeptide repeat 401 429 1.5E-5 T 12-10-2018 IPR013105 Tetratricopeptide repeat 2 M634_01090 944c1b7d6fd502ed9133841e31f6738b 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 7.3E-29 T 12-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M634_01090 944c1b7d6fd502ed9133841e31f6738b 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 224 1.8E-7 T 12-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M634_01090 944c1b7d6fd502ed9133841e31f6738b 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 338 454 8.1E-17 T 12-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M634_01090 944c1b7d6fd502ed9133841e31f6738b 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1338 0.0 T 12-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M634_01090 944c1b7d6fd502ed9133841e31f6738b 1342 Gene3D G3DSA:3.90.1100.10 416 626 1.6E-71 T 12-10-2018 M634_01090 944c1b7d6fd502ed9133841e31f6738b 1342 Gene3D G3DSA:2.40.270.10 790 833 1.1E-6 T 12-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M634_01090 944c1b7d6fd502ed9133841e31f6738b 1342 Gene3D G3DSA:3.90.1100.10 19 156 3.4E-48 T 12-10-2018 M634_01090 944c1b7d6fd502ed9133841e31f6738b 1342 Gene3D G3DSA:3.90.1100.10 646 713 1.8E-21 T 12-10-2018 M634_01090 944c1b7d6fd502ed9133841e31f6738b 1342 Gene3D G3DSA:2.40.50.100 714 788 3.6E-32 T 12-10-2018 M634_01090 944c1b7d6fd502ed9133841e31f6738b 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1263 9.9E-157 T 12-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M634_01090 944c1b7d6fd502ed9133841e31f6738b 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1341 12.286 T 12-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M634_01090 944c1b7d6fd502ed9133841e31f6738b 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1265 1339 3.0E-27 T 12-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M634_01090 944c1b7d6fd502ed9133841e31f6738b 1342 SUPERFAMILY SSF64484 11 1341 0.0 T 12-10-2018 M634_01090 944c1b7d6fd502ed9133841e31f6738b 1342 Gene3D G3DSA:3.90.1800.10 1251 1305 8.1E-11 T 12-10-2018 M634_01090 944c1b7d6fd502ed9133841e31f6738b 1342 Gene3D G3DSA:2.40.270.10 1035 1241 1.1E-87 T 12-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M634_01090 944c1b7d6fd502ed9133841e31f6738b 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 1.1E-57 T 12-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M634_01090 944c1b7d6fd502ed9133841e31f6738b 1342 Gene3D G3DSA:3.90.1110.10 157 271 1.1E-27 T 12-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M634_01090 944c1b7d6fd502ed9133841e31f6738b 1342 Gene3D G3DSA:2.40.50.150 834 954 2.6E-44 T 12-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M634_01090 944c1b7d6fd502ed9133841e31f6738b 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 12-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M634_01090 944c1b7d6fd502ed9133841e31f6738b 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 1.2E-22 T 12-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M634_17305 d6d0e592cfc06631ceda85e6d19efdf9 289 Pfam PF00892 EamA-like transporter family 146 275 1.5E-14 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M634_17305 d6d0e592cfc06631ceda85e6d19efdf9 289 SUPERFAMILY SSF103481 184 280 3.66E-11 T 12-10-2018 M634_17305 d6d0e592cfc06631ceda85e6d19efdf9 289 SUPERFAMILY SSF103481 39 139 5.23E-8 T 12-10-2018 M634_21190 c6ac81ef548eb61ac1c31102cc963372 93 Pfam PF09981 Uncharacterized protein conserved in bacteria (DUF2218) 6 91 3.1E-26 T 12-10-2018 IPR014543 Uncharacterised conserved protein UCP028291 M634_21190 c6ac81ef548eb61ac1c31102cc963372 93 Gene3D G3DSA:3.30.310.50 1 93 3.5E-25 T 12-10-2018 M634_21190 c6ac81ef548eb61ac1c31102cc963372 93 PIRSF PIRSF028291 1 93 7.8E-27 T 12-10-2018 IPR014543 Uncharacterised conserved protein UCP028291 M634_12240 83aff2abd921daccfa8098abf6877937 298 Gene3D G3DSA:1.10.10.10 5 94 7.2E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_12240 83aff2abd921daccfa8098abf6877937 298 Pfam PF03466 LysR substrate binding domain 91 295 4.6E-36 T 12-10-2018 IPR005119 LysR, substrate-binding M634_12240 83aff2abd921daccfa8098abf6877937 298 Gene3D G3DSA:3.40.190.290 95 295 1.5E-58 T 12-10-2018 M634_12240 83aff2abd921daccfa8098abf6877937 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.8E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_12240 83aff2abd921daccfa8098abf6877937 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.8E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_12240 83aff2abd921daccfa8098abf6877937 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.8E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_12240 83aff2abd921daccfa8098abf6877937 298 SUPERFAMILY SSF46785 6 87 2.83E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_12240 83aff2abd921daccfa8098abf6877937 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.8E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_12240 83aff2abd921daccfa8098abf6877937 298 SUPERFAMILY SSF53850 90 296 2.79E-41 T 12-10-2018 M634_06065 a9dda419516b6a5d8ccab789e0f7100c 275 Pfam PF00106 short chain dehydrogenase 3 187 8.9E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_06065 a9dda419516b6a5d8ccab789e0f7100c 275 Gene3D G3DSA:3.40.50.720 2 264 2.5E-57 T 12-10-2018 M634_06065 a9dda419516b6a5d8ccab789e0f7100c 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 4.6E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_06065 a9dda419516b6a5d8ccab789e0f7100c 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 4.6E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_06065 a9dda419516b6a5d8ccab789e0f7100c 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 4.6E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_06065 a9dda419516b6a5d8ccab789e0f7100c 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 4.6E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_06065 a9dda419516b6a5d8ccab789e0f7100c 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 4.6E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_06065 a9dda419516b6a5d8ccab789e0f7100c 275 SUPERFAMILY SSF51735 1 271 1.33E-54 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_06065 a9dda419516b6a5d8ccab789e0f7100c 275 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 M634_06900 cef69596a8921334b03b97fbc4053d21 235 Pfam PF00005 ABC transporter 24 172 2.6E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_06900 cef69596a8921334b03b97fbc4053d21 235 SMART SM00382 33 221 1.8E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_06900 cef69596a8921334b03b97fbc4053d21 235 SUPERFAMILY SSF52540 4 225 1.95E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_06900 cef69596a8921334b03b97fbc4053d21 235 Gene3D G3DSA:3.40.50.300 1 233 2.6E-66 T 12-10-2018 M634_06900 cef69596a8921334b03b97fbc4053d21 235 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 4 223 4.3E-112 T 12-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 M634_06900 cef69596a8921334b03b97fbc4053d21 235 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_08010 3044556446c05c7e51a77a40ace0f0c2 754 SUPERFAMILY SSF48695 192 736 6.65E-36 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily M634_08010 3044556446c05c7e51a77a40ace0f0c2 754 TIGRFAM TIGR03507 decahem_SO1788: decaheme c-type cytochrome, OmcA/MtrC family 52 748 3.4E-127 T 12-10-2018 IPR020014 Decahaem cytochrome, c-type, OmcA/MtrC M634_08010 3044556446c05c7e51a77a40ace0f0c2 754 Gene3D G3DSA:3.90.10.10 279 387 6.9E-5 T 12-10-2018 M634_08010 3044556446c05c7e51a77a40ace0f0c2 754 Pfam PF14522 Cytochrome c7 and related cytochrome c 647 736 1.0E-5 T 12-10-2018 IPR029467 C-type polyheme cytochrome OmcB M634_04070 56af2f0620d4b50904953ef9be223162 761 SUPERFAMILY SSF101904 499 743 1.31E-50 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal M634_04070 56af2f0620d4b50904953ef9be223162 761 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 6 745 33.907 T 12-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 M634_04070 56af2f0620d4b50904953ef9be223162 761 Gene3D G3DSA:3.90.199.10 34 483 7.1E-180 T 12-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 M634_04070 56af2f0620d4b50904953ef9be223162 761 SMART SM00434 13 463 4.8E-234 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 M634_04070 56af2f0620d4b50904953ef9be223162 761 SUPERFAMILY SSF56719 33 485 2.88E-156 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 M634_04070 56af2f0620d4b50904953ef9be223162 761 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 10 744 0.0 T 12-10-2018 M634_04070 56af2f0620d4b50904953ef9be223162 761 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 600 635 0.17 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 M634_04070 56af2f0620d4b50904953ef9be223162 761 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 647 693 1.4E-7 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 M634_04070 56af2f0620d4b50904953ef9be223162 761 Gene3D G3DSA:1.10.268.10 371 456 7.1E-180 T 12-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 M634_04070 56af2f0620d4b50904953ef9be223162 761 Gene3D G3DSA:3.30.1360.40 240 333 7.1E-180 T 12-10-2018 M634_04070 56af2f0620d4b50904953ef9be223162 761 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 34 470 2.3E-137 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 M634_04070 56af2f0620d4b50904953ef9be223162 761 Gene3D G3DSA:2.120.10.90 502 739 1.6E-13 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal M634_13425 fc7dfbce9fc9936c2ef40389d48230f2 925 Gene3D G3DSA:3.30.830.10 1 228 1.2E-87 T 12-10-2018 M634_13425 fc7dfbce9fc9936c2ef40389d48230f2 925 Gene3D G3DSA:3.30.830.10 239 468 1.5E-71 T 12-10-2018 M634_13425 fc7dfbce9fc9936c2ef40389d48230f2 925 Pfam PF05193 Peptidase M16 inactive domain 182 354 2.2E-25 T 12-10-2018 IPR007863 Peptidase M16, C-terminal M634_13425 fc7dfbce9fc9936c2ef40389d48230f2 925 Pfam PF05193 Peptidase M16 inactive domain 648 822 3.7E-9 T 12-10-2018 IPR007863 Peptidase M16, C-terminal M634_13425 fc7dfbce9fc9936c2ef40389d48230f2 925 Pfam PF00675 Insulinase (Peptidase family M16) 21 158 4.8E-39 T 12-10-2018 IPR011765 Peptidase M16, N-terminal M634_13425 fc7dfbce9fc9936c2ef40389d48230f2 925 SUPERFAMILY SSF63411 703 909 3.84E-45 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 M634_13425 fc7dfbce9fc9936c2ef40389d48230f2 925 Pfam PF16187 Middle or third domain of peptidase_M16 366 641 1.5E-81 T 12-10-2018 IPR032632 Peptidase M16, middle/third domain M634_13425 fc7dfbce9fc9936c2ef40389d48230f2 925 Gene3D G3DSA:3.30.830.10 618 877 4.6E-109 T 12-10-2018 M634_13425 fc7dfbce9fc9936c2ef40389d48230f2 925 SUPERFAMILY SSF63411 470 694 1.12E-60 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 M634_13425 fc7dfbce9fc9936c2ef40389d48230f2 925 SUPERFAMILY SSF63411 4 227 3.49E-60 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 M634_13425 fc7dfbce9fc9936c2ef40389d48230f2 925 Gene3D G3DSA:3.30.830.10 470 852 4.6E-109 T 12-10-2018 M634_13425 fc7dfbce9fc9936c2ef40389d48230f2 925 SUPERFAMILY SSF63411 232 468 2.07E-79 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 M634_13425 fc7dfbce9fc9936c2ef40389d48230f2 925 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 42 65 - T 12-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 M634_13565 f9ceb44509f52cee5f5f6a49c3a6161c 295 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 22 261 1.6E-22 T 12-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 M634_13565 f9ceb44509f52cee5f5f6a49c3a6161c 295 SUPERFAMILY SSF52540 22 282 1.82E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_13565 f9ceb44509f52cee5f5f6a49c3a6161c 295 PIRSF PIRSF003092 6 287 8.7E-86 T 12-10-2018 IPR025501 ATP binding protein MinD M634_13565 f9ceb44509f52cee5f5f6a49c3a6161c 295 Gene3D G3DSA:3.40.50.300 22 262 3.3E-59 T 12-10-2018 M634_06650 6cf544cebc24d7688993a6b82d95b7ac 435 Pfam PF00425 chorismate binding enzyme 165 417 4.8E-71 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal M634_06650 6cf544cebc24d7688993a6b82d95b7ac 435 Gene3D G3DSA:3.60.120.10 1 429 1.7E-127 T 12-10-2018 IPR005801 ADC synthase GO:0009058 M634_06650 6cf544cebc24d7688993a6b82d95b7ac 435 Hamap MF_01935 Isochorismate synthase MenF [menF]. 3 427 30.911 T 12-10-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 M634_06650 6cf544cebc24d7688993a6b82d95b7ac 435 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 85 424 8.4E-103 T 12-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 M634_06650 6cf544cebc24d7688993a6b82d95b7ac 435 SUPERFAMILY SSF56322 30 425 3.14E-99 T 12-10-2018 IPR005801 ADC synthase GO:0009058 M634_16085 c9e6bde80644cf906d932e2016531d33 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 208 5.3E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_16085 c9e6bde80644cf906d932e2016531d33 214 SUPERFAMILY SSF46894 141 210 1.94E-18 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M634_16085 c9e6bde80644cf906d932e2016531d33 214 Gene3D G3DSA:3.40.50.2300 22 142 1.9E-24 T 12-10-2018 M634_16085 c9e6bde80644cf906d932e2016531d33 214 SMART SM00421 151 208 2.1E-20 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_16085 c9e6bde80644cf906d932e2016531d33 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 4.7E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_16085 c9e6bde80644cf906d932e2016531d33 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 4.7E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_16085 c9e6bde80644cf906d932e2016531d33 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 4.7E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_16085 c9e6bde80644cf906d932e2016531d33 214 Gene3D G3DSA:1.10.10.10 144 214 1.4E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_09155 b6a53871b5ed7b0d98b9fa6513f4e1ad 705 PIRSF PIRSF005419 1 705 2.2E-263 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M634_09155 b6a53871b5ed7b0d98b9fa6513f4e1ad 705 Gene3D G3DSA:1.10.490.80 605 703 9.7E-34 T 12-10-2018 M634_09155 b6a53871b5ed7b0d98b9fa6513f4e1ad 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 132 148 4.9E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M634_09155 b6a53871b5ed7b0d98b9fa6513f4e1ad 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 33 46 4.9E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M634_09155 b6a53871b5ed7b0d98b9fa6513f4e1ad 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 232 246 4.9E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M634_09155 b6a53871b5ed7b0d98b9fa6513f4e1ad 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 151 169 4.9E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M634_09155 b6a53871b5ed7b0d98b9fa6513f4e1ad 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 181 198 4.9E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M634_09155 b6a53871b5ed7b0d98b9fa6513f4e1ad 705 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 70 89 4.9E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M634_09155 b6a53871b5ed7b0d98b9fa6513f4e1ad 705 TIGRFAM TIGR01399 hrcV: type III secretion protein, HrcV family 14 703 2.3E-300 T 12-10-2018 IPR006302 Type III secretion protein HrcV GO:0015031|GO:0016021 M634_09155 b6a53871b5ed7b0d98b9fa6513f4e1ad 705 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 137 160 - T 12-10-2018 IPR025505 FHIPEP conserved site M634_09155 b6a53871b5ed7b0d98b9fa6513f4e1ad 705 Gene3D G3DSA:1.10.8.540 515 603 2.2E-32 T 12-10-2018 M634_09155 b6a53871b5ed7b0d98b9fa6513f4e1ad 705 Pfam PF00771 FHIPEP family 26 695 1.1E-237 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M634_09155 b6a53871b5ed7b0d98b9fa6513f4e1ad 705 Gene3D G3DSA:3.40.30.60 369 514 2.4E-46 T 12-10-2018 M634_02120 290ba65205f5630f582d603ebc1910f9 87 SUPERFAMILY SSF160272 1 86 1.7E-29 T 12-10-2018 IPR036692 Shew3726-like superfamily M634_02120 290ba65205f5630f582d603ebc1910f9 87 Pfam PF07369 Protein of unknown function (DUF1488) 5 85 4.1E-26 T 12-10-2018 IPR009962 Protein of unknown function DUF1488 M634_02120 290ba65205f5630f582d603ebc1910f9 87 Gene3D G3DSA:3.30.160.140 1 87 9.1E-33 T 12-10-2018 IPR036692 Shew3726-like superfamily M634_02350 bc6ffd236d6b7146ef2894d56b82ba92 680 SUPERFAMILY SSF55486 1 677 1.0E-213 T 12-10-2018 M634_02350 bc6ffd236d6b7146ef2894d56b82ba92 680 Gene3D G3DSA:1.10.1370.40 13 675 2.9E-271 T 12-10-2018 M634_02350 bc6ffd236d6b7146ef2894d56b82ba92 680 Pfam PF01432 Peptidase family M3 222 677 1.1E-164 T 12-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 M634_02350 bc6ffd236d6b7146ef2894d56b82ba92 680 Gene3D G3DSA:1.10.1370.10 140 610 2.9E-271 T 12-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 M634_04560 467a1c329d900a73c19d8250bc58c791 321 Gene3D G3DSA:3.40.1010.20 101 202 2.5E-108 T 12-10-2018 M634_04560 467a1c329d900a73c19d8250bc58c791 321 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 6 290 5.0E-98 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 M634_04560 467a1c329d900a73c19d8250bc58c791 321 Gene3D G3DSA:3.40.50.11270 16 100 2.5E-108 T 12-10-2018 M634_04560 467a1c329d900a73c19d8250bc58c791 321 Pfam PF02401 LytB protein 7 288 2.5E-92 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 M634_04560 467a1c329d900a73c19d8250bc58c791 321 Gene3D G3DSA:3.40.1010.20 10 287 2.5E-108 T 12-10-2018 M634_04560 467a1c329d900a73c19d8250bc58c791 321 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 5 292 37.972 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 M634_01000 8e11ba72fe295aeeb4fe400453b4c464 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 3.7E-11 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M634_01000 8e11ba72fe295aeeb4fe400453b4c464 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 3.7E-11 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M634_01000 8e11ba72fe295aeeb4fe400453b4c464 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 3.7E-11 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M634_01000 8e11ba72fe295aeeb4fe400453b4c464 132 SMART SM00422 2 71 4.1E-30 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M634_01000 8e11ba72fe295aeeb4fe400453b4c464 132 Pfam PF13411 MerR HTH family regulatory protein 3 69 1.3E-17 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M634_01000 8e11ba72fe295aeeb4fe400453b4c464 132 SUPERFAMILY SSF46955 2 121 4.76E-34 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily M634_01000 8e11ba72fe295aeeb4fe400453b4c464 132 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 132 7.3E-70 T 12-10-2018 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 M634_01000 8e11ba72fe295aeeb4fe400453b4c464 132 Gene3D G3DSA:1.10.1660.10 1 130 8.7E-37 T 12-10-2018 M634_10285 771ec09225f45bcee9dbb8fe5e7f042d 1051 PRINTS PR00344 Bacterial sensor protein C-terminal signature 582 600 1.1E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_10285 771ec09225f45bcee9dbb8fe5e7f042d 1051 PRINTS PR00344 Bacterial sensor protein C-terminal signature 547 561 1.1E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_10285 771ec09225f45bcee9dbb8fe5e7f042d 1051 PRINTS PR00344 Bacterial sensor protein C-terminal signature 606 619 1.1E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_10285 771ec09225f45bcee9dbb8fe5e7f042d 1051 PRINTS PR00344 Bacterial sensor protein C-terminal signature 565 575 1.1E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_10285 771ec09225f45bcee9dbb8fe5e7f042d 1051 SUPERFAMILY SSF52172 768 896 3.7E-37 T 12-10-2018 IPR011006 CheY-like superfamily M634_10285 771ec09225f45bcee9dbb8fe5e7f042d 1051 Gene3D G3DSA:3.40.50.12330 760 824 1.8E-18 T 12-10-2018 M634_10285 771ec09225f45bcee9dbb8fe5e7f042d 1051 Gene3D G3DSA:3.40.50.12330 921 987 7.9E-22 T 12-10-2018 M634_10285 771ec09225f45bcee9dbb8fe5e7f042d 1051 SMART SM00388 394 459 1.6E-25 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_10285 771ec09225f45bcee9dbb8fe5e7f042d 1051 SUPERFAMILY SSF55874 448 618 6.02E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_10285 771ec09225f45bcee9dbb8fe5e7f042d 1051 SUPERFAMILY SSF52172 928 1050 1.99E-37 T 12-10-2018 IPR011006 CheY-like superfamily M634_10285 771ec09225f45bcee9dbb8fe5e7f042d 1051 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 507 619 1.8E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_10285 771ec09225f45bcee9dbb8fe5e7f042d 1051 Gene3D G3DSA:3.30.565.10 459 625 5.7E-51 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_10285 771ec09225f45bcee9dbb8fe5e7f042d 1051 Gene3D G3DSA:1.10.287.130 357 457 1.5E-30 T 12-10-2018 M634_10285 771ec09225f45bcee9dbb8fe5e7f042d 1051 Gene3D G3DSA:3.40.50.2300 988 1051 8.3E-22 T 12-10-2018 M634_10285 771ec09225f45bcee9dbb8fe5e7f042d 1051 Gene3D G3DSA:3.40.50.2300 825 892 7.2E-22 T 12-10-2018 M634_10285 771ec09225f45bcee9dbb8fe5e7f042d 1051 SMART SM00448 768 885 2.2E-38 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_10285 771ec09225f45bcee9dbb8fe5e7f042d 1051 SMART SM00448 930 1047 1.6E-38 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_10285 771ec09225f45bcee9dbb8fe5e7f042d 1051 SUPERFAMILY SSF47384 382 459 3.14E-21 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M634_10285 771ec09225f45bcee9dbb8fe5e7f042d 1051 Pfam PF00072 Response regulator receiver domain 932 1047 1.2E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_10285 771ec09225f45bcee9dbb8fe5e7f042d 1051 Pfam PF00072 Response regulator receiver domain 770 885 3.7E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_10285 771ec09225f45bcee9dbb8fe5e7f042d 1051 Pfam PF00512 His Kinase A (phospho-acceptor) domain 394 459 8.7E-20 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_10285 771ec09225f45bcee9dbb8fe5e7f042d 1051 SMART SM00387 506 622 3.1E-36 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_19205 8d8aabaa511952a4b158c56040ff251f 431 Gene3D G3DSA:1.25.40.80 135 294 3.9E-47 T 12-10-2018 M634_19205 8d8aabaa511952a4b158c56040ff251f 431 PRINTS PR00147 DNA photolyase signature 341 359 6.6E-12 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 M634_19205 8d8aabaa511952a4b158c56040ff251f 431 PRINTS PR00147 DNA photolyase signature 321 337 6.6E-12 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 M634_19205 8d8aabaa511952a4b158c56040ff251f 431 PRINTS PR00147 DNA photolyase signature 380 394 6.6E-12 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 M634_19205 8d8aabaa511952a4b158c56040ff251f 431 TIGRFAM TIGR02765 crypto_DASH: cryptochrome, DASH family 4 419 2.6E-188 T 12-10-2018 IPR014133 Cryptochrome DASH GO:0003913|GO:0006281 M634_19205 8d8aabaa511952a4b158c56040ff251f 431 Pfam PF03441 FAD binding domain of DNA photolyase 274 417 3.2E-40 T 12-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 M634_19205 8d8aabaa511952a4b158c56040ff251f 431 Pfam PF00875 DNA photolyase 7 163 1.3E-20 T 12-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 M634_19205 8d8aabaa511952a4b158c56040ff251f 431 SUPERFAMILY SSF52425 2 189 1.31E-31 T 12-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 M634_19205 8d8aabaa511952a4b158c56040ff251f 431 Gene3D G3DSA:1.10.579.10 297 428 2.9E-51 T 12-10-2018 M634_19205 8d8aabaa511952a4b158c56040ff251f 431 SUPERFAMILY SSF48173 195 420 5.49E-70 T 12-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 M634_19205 8d8aabaa511952a4b158c56040ff251f 431 Gene3D G3DSA:3.40.50.620 1 126 2.9E-17 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M634_18535 0bcd3926bf7bd57a5c1fa3a5e67f9d24 146 Pfam PF01037 Lrp/AsnC ligand binding domain 67 141 2.2E-16 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain M634_18535 0bcd3926bf7bd57a5c1fa3a5e67f9d24 146 Gene3D G3DSA:3.30.70.920 54 137 3.0E-20 T 12-10-2018 M634_18535 0bcd3926bf7bd57a5c1fa3a5e67f9d24 146 SUPERFAMILY SSF54909 63 145 1.74E-16 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel M634_18535 0bcd3926bf7bd57a5c1fa3a5e67f9d24 146 SUPERFAMILY SSF46785 1 60 5.47E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_18535 0bcd3926bf7bd57a5c1fa3a5e67f9d24 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 1.7E-17 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M634_18535 0bcd3926bf7bd57a5c1fa3a5e67f9d24 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 1.7E-17 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M634_18535 0bcd3926bf7bd57a5c1fa3a5e67f9d24 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 1.7E-17 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M634_18535 0bcd3926bf7bd57a5c1fa3a5e67f9d24 146 SMART SM00344 1 110 3.1E-37 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 M634_18535 0bcd3926bf7bd57a5c1fa3a5e67f9d24 146 Gene3D G3DSA:1.10.10.10 2 53 9.8E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_18535 0bcd3926bf7bd57a5c1fa3a5e67f9d24 146 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 1.1E-18 T 12-10-2018 M634_18535 0bcd3926bf7bd57a5c1fa3a5e67f9d24 146 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 12-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site M634_15445 5efc6e73bba9a4150f8875ef4dd47e6c 384 PIRSF PIRSF000497 1 381 9.8E-175 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 M634_15445 5efc6e73bba9a4150f8875ef4dd47e6c 384 Gene3D G3DSA:3.30.300.10 5 233 1.9E-179 T 12-10-2018 M634_15445 5efc6e73bba9a4150f8875ef4dd47e6c 384 Gene3D G3DSA:3.30.300.10 11 270 1.9E-179 T 12-10-2018 M634_15445 5efc6e73bba9a4150f8875ef4dd47e6c 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 2.8E-45 T 12-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 M634_15445 5efc6e73bba9a4150f8875ef4dd47e6c 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 59.186 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 M634_15445 5efc6e73bba9a4150f8875ef4dd47e6c 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 3.5E-43 T 12-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 M634_15445 5efc6e73bba9a4150f8875ef4dd47e6c 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 12-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 M634_15445 5efc6e73bba9a4150f8875ef4dd47e6c 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 379 2.2E-197 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 M634_15445 5efc6e73bba9a4150f8875ef4dd47e6c 384 SUPERFAMILY SSF55973 3 109 1.61E-47 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 M634_15445 5efc6e73bba9a4150f8875ef4dd47e6c 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 369 6.1E-69 T 12-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 M634_15445 5efc6e73bba9a4150f8875ef4dd47e6c 384 SUPERFAMILY SSF55973 111 232 1.49E-51 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 M634_15445 5efc6e73bba9a4150f8875ef4dd47e6c 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 12-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 M634_15445 5efc6e73bba9a4150f8875ef4dd47e6c 384 SUPERFAMILY SSF55973 233 382 5.89E-71 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 M634_15445 5efc6e73bba9a4150f8875ef4dd47e6c 384 Gene3D G3DSA:3.30.300.10 103 372 1.9E-179 T 12-10-2018 M634_06975 af6e8e82b348275bb18dda3eaec2131f 758 Gene3D G3DSA:3.20.70.20 1 758 0.0 T 12-10-2018 M634_06975 af6e8e82b348275bb18dda3eaec2131f 758 PIRSF PIRSF000379 5 758 0.0 T 12-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 M634_06975 af6e8e82b348275bb18dda3eaec2131f 758 Pfam PF02901 Pyruvate formate lyase-like 21 612 1.9E-206 T 12-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 M634_06975 af6e8e82b348275bb18dda3eaec2131f 758 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 8 758 0.0 T 12-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 M634_06975 af6e8e82b348275bb18dda3eaec2131f 758 ProSitePatterns PS00850 Glycine radical domain signature. 728 736 - T 12-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site M634_06975 af6e8e82b348275bb18dda3eaec2131f 758 SUPERFAMILY SSF51998 4 757 6.18E-290 T 12-10-2018 M634_06975 af6e8e82b348275bb18dda3eaec2131f 758 Pfam PF01228 Glycine radical 628 739 2.6E-43 T 12-10-2018 IPR001150 Glycine radical domain GO:0003824 M634_05305 98a903b9e933fac799effcde48a2b8d4 416 Gene3D G3DSA:3.40.309.10 223 373 2.9E-150 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 M634_05305 98a903b9e933fac799effcde48a2b8d4 416 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 322 343 - T 12-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 M634_05305 98a903b9e933fac799effcde48a2b8d4 416 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 2 415 39.143 T 12-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 M634_05305 98a903b9e933fac799effcde48a2b8d4 416 PIRSF PIRSF000151 1 416 6.1E-164 T 12-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 M634_05305 98a903b9e933fac799effcde48a2b8d4 416 SUPERFAMILY SSF53720 3 408 1.57E-109 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 M634_05305 98a903b9e933fac799effcde48a2b8d4 416 Pfam PF00171 Aldehyde dehydrogenase family 5 280 2.5E-15 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 M634_05305 98a903b9e933fac799effcde48a2b8d4 416 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 10 405 1.0E-165 T 12-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 M634_05305 98a903b9e933fac799effcde48a2b8d4 416 Gene3D G3DSA:3.40.605.10 15 408 2.9E-150 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 M634_09560 05feac70db1e189a7678254293c827ed 122 Pfam PF12472 Phage related protein 63 119 2.5E-20 T 12-10-2018 IPR021096 Vibrio phage VSK, Orf152 M634_07110 bc50783d90a0079740e5d36dd6e83993 876 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 603 628 8.0E-6 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 M634_07110 bc50783d90a0079740e5d36dd6e83993 876 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 713 750 4.5E-9 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 M634_07110 bc50783d90a0079740e5d36dd6e83993 876 SMART SM00437 279 533 2.9E-118 T 12-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 M634_07110 bc50783d90a0079740e5d36dd6e83993 876 Gene3D G3DSA:1.10.290.10 287 411 6.3E-162 T 12-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 M634_07110 bc50783d90a0079740e5d36dd6e83993 876 SMART SM00493 3 139 1.3E-32 T 12-10-2018 IPR006171 TOPRIM domain M634_07110 bc50783d90a0079740e5d36dd6e83993 876 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 640 7.5E-249 T 12-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 M634_07110 bc50783d90a0079740e5d36dd6e83993 876 Pfam PF01131 DNA topoisomerase 164 571 1.3E-127 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 M634_07110 bc50783d90a0079740e5d36dd6e83993 876 Gene3D G3DSA:2.20.25.10 813 871 1.0E-28 T 12-10-2018 M634_07110 bc50783d90a0079740e5d36dd6e83993 876 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 316 330 - T 12-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 M634_07110 bc50783d90a0079740e5d36dd6e83993 876 Gene3D G3DSA:3.30.65.10 750 812 4.2E-32 T 12-10-2018 M634_07110 bc50783d90a0079740e5d36dd6e83993 876 Gene3D G3DSA:3.30.65.10 700 749 2.0E-6 T 12-10-2018 M634_07110 bc50783d90a0079740e5d36dd6e83993 876 SUPERFAMILY SSF57783 814 870 1.16E-21 T 12-10-2018 M634_07110 bc50783d90a0079740e5d36dd6e83993 876 SUPERFAMILY SSF57783 749 812 2.72E-19 T 12-10-2018 M634_07110 bc50783d90a0079740e5d36dd6e83993 876 Pfam PF01751 Toprim domain 5 149 7.4E-32 T 12-10-2018 IPR006171 TOPRIM domain M634_07110 bc50783d90a0079740e5d36dd6e83993 876 SMART SM00436 140 228 2.5E-47 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 M634_07110 bc50783d90a0079740e5d36dd6e83993 876 Pfam PF08272 Topoisomerase I zinc-ribbon-like 762 798 2.9E-11 T 12-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 M634_07110 bc50783d90a0079740e5d36dd6e83993 876 Pfam PF08272 Topoisomerase I zinc-ribbon-like 829 869 8.0E-19 T 12-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 M634_07110 bc50783d90a0079740e5d36dd6e83993 876 SUPERFAMILY SSF57783 705 747 2.04E-5 T 12-10-2018 M634_07110 bc50783d90a0079740e5d36dd6e83993 876 Gene3D G3DSA:1.10.460.10 172 577 6.3E-162 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 M634_07110 bc50783d90a0079740e5d36dd6e83993 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 198 216 3.6E-36 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 M634_07110 bc50783d90a0079740e5d36dd6e83993 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 113 126 3.6E-36 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 M634_07110 bc50783d90a0079740e5d36dd6e83993 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 321 330 3.6E-36 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 M634_07110 bc50783d90a0079740e5d36dd6e83993 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 397 413 3.6E-36 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 M634_07110 bc50783d90a0079740e5d36dd6e83993 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 496 510 3.6E-36 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 M634_07110 bc50783d90a0079740e5d36dd6e83993 876 SUPERFAMILY SSF56712 3 615 5.49E-199 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain M634_07110 bc50783d90a0079740e5d36dd6e83993 876 Gene3D G3DSA:3.40.50.140 1 170 1.4E-66 T 12-10-2018 M634_07110 bc50783d90a0079740e5d36dd6e83993 876 Gene3D G3DSA:2.70.20.10 220 479 6.3E-162 T 12-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 M634_07110 bc50783d90a0079740e5d36dd6e83993 876 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 737 54.354 T 12-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 M634_20000 92ef9c572851e1985be3ce2930b392d8 278 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 7 276 66.127 T 12-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein M634_20000 92ef9c572851e1985be3ce2930b392d8 278 Pfam PF03618 Kinase/pyrophosphorylase 10 267 4.9E-73 T 12-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 M634_19020 20d064e1dfd708b8e294660daff54d40 690 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 577 686 9.9E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_19020 20d064e1dfd708b8e294660daff54d40 690 Pfam PF13426 PAS domain 324 427 3.8E-6 T 12-10-2018 IPR000014 PAS domain M634_19020 20d064e1dfd708b8e294660daff54d40 690 PIRSF PIRSF036431 319 690 2.4E-104 T 12-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) M634_19020 20d064e1dfd708b8e294660daff54d40 690 PIRSF PIRSF036431 1 335 4.0E-40 T 12-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) M634_19020 20d064e1dfd708b8e294660daff54d40 690 SMART SM00387 577 685 3.4E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_19020 20d064e1dfd708b8e294660daff54d40 690 Gene3D G3DSA:3.30.565.10 537 689 4.8E-36 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_19020 20d064e1dfd708b8e294660daff54d40 690 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 309 436 3.2E-13 T 12-10-2018 IPR000014 PAS domain M634_19020 20d064e1dfd708b8e294660daff54d40 690 Gene3D G3DSA:3.30.450.20 59 174 2.1E-11 T 12-10-2018 M634_19020 20d064e1dfd708b8e294660daff54d40 690 PRINTS PR00344 Bacterial sensor protein C-terminal signature 616 630 1.0E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_19020 20d064e1dfd708b8e294660daff54d40 690 PRINTS PR00344 Bacterial sensor protein C-terminal signature 634 644 1.0E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_19020 20d064e1dfd708b8e294660daff54d40 690 PRINTS PR00344 Bacterial sensor protein C-terminal signature 671 684 1.0E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_19020 20d064e1dfd708b8e294660daff54d40 690 PRINTS PR00344 Bacterial sensor protein C-terminal signature 647 665 1.0E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_19020 20d064e1dfd708b8e294660daff54d40 690 SMART SM00086 389 429 0.004 T 12-10-2018 IPR001610 PAC motif M634_19020 20d064e1dfd708b8e294660daff54d40 690 SUPERFAMILY SSF55874 539 683 7.6E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_19020 20d064e1dfd708b8e294660daff54d40 690 Gene3D G3DSA:1.10.287.130 445 532 1.9E-13 T 12-10-2018 M634_19020 20d064e1dfd708b8e294660daff54d40 690 Gene3D G3DSA:3.30.450.20 299 426 1.5E-12 T 12-10-2018 M634_19020 20d064e1dfd708b8e294660daff54d40 690 SUPERFAMILY SSF55785 301 427 6.47E-12 T 12-10-2018 IPR035965 PAS domain superfamily M634_19020 20d064e1dfd708b8e294660daff54d40 690 SUPERFAMILY SSF47384 452 532 1.22E-6 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M634_00510 d2021b22f6e2f83212ce78f48e5ef408 438 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 12-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 M634_00510 d2021b22f6e2f83212ce78f48e5ef408 438 Pfam PF00709 Adenylosuccinate synthetase 5 430 1.6E-178 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 M634_00510 d2021b22f6e2f83212ce78f48e5ef408 438 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 12-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 M634_00510 d2021b22f6e2f83212ce78f48e5ef408 438 SMART SM00788 4 431 0.0 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 M634_00510 d2021b22f6e2f83212ce78f48e5ef408 438 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 438 220.46 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 M634_00510 d2021b22f6e2f83212ce78f48e5ef408 438 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 431 6.2E-193 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 M634_00510 d2021b22f6e2f83212ce78f48e5ef408 438 Gene3D G3DSA:1.10.300.10 102 201 8.7E-108 T 12-10-2018 M634_00510 d2021b22f6e2f83212ce78f48e5ef408 438 SUPERFAMILY SSF52540 3 436 1.01E-179 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_00510 d2021b22f6e2f83212ce78f48e5ef408 438 Gene3D G3DSA:3.40.440.10 6 249 8.7E-108 T 12-10-2018 M634_00510 d2021b22f6e2f83212ce78f48e5ef408 438 Gene3D G3DSA:3.90.170.10 267 438 2.0E-66 T 12-10-2018 M634_12095 e7d6af1ab77eeac711224feb223224d9 303 Gene3D G3DSA:1.10.10.10 1 92 2.0E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_12095 e7d6af1ab77eeac711224feb223224d9 303 SUPERFAMILY SSF46785 1 112 2.18E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_12095 e7d6af1ab77eeac711224feb223224d9 303 SUPERFAMILY SSF53850 89 296 3.53E-40 T 12-10-2018 M634_12095 e7d6af1ab77eeac711224feb223224d9 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 9.5E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_12095 e7d6af1ab77eeac711224feb223224d9 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 9.5E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_12095 e7d6af1ab77eeac711224feb223224d9 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 9.5E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_12095 e7d6af1ab77eeac711224feb223224d9 303 Gene3D G3DSA:3.40.190.10 93 290 9.5E-73 T 12-10-2018 M634_12095 e7d6af1ab77eeac711224feb223224d9 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.8E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_12095 e7d6af1ab77eeac711224feb223224d9 303 Pfam PF03466 LysR substrate binding domain 89 293 1.2E-41 T 12-10-2018 IPR005119 LysR, substrate-binding M634_12095 e7d6af1ab77eeac711224feb223224d9 303 Gene3D G3DSA:3.40.190.10 163 267 9.5E-73 T 12-10-2018 M634_01045 614920a95c3bed3315f8ddaa978eaa81 195 Gene3D G3DSA:1.20.1590.10 2 195 8.4E-67 T 12-10-2018 IPR023381 YP001051499.1-like domain superfamily M634_01045 614920a95c3bed3315f8ddaa978eaa81 195 Pfam PF04222 Protein of unknown function (DUF416) 6 193 2.4E-78 T 12-10-2018 IPR007338 Protein of unknown function DUF416 M634_24420 094e6f3926cbe018f71974a43a7a43c1 342 Pfam PF01979 Amidohydrolase family 11 315 4.9E-19 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 M634_24420 094e6f3926cbe018f71974a43a7a43c1 342 Gene3D G3DSA:3.20.20.140 2 342 1.2E-111 T 12-10-2018 M634_24420 094e6f3926cbe018f71974a43a7a43c1 342 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 4 342 7.9E-138 T 12-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M634_24420 094e6f3926cbe018f71974a43a7a43c1 342 SUPERFAMILY SSF51556 1 342 1.36E-146 T 12-10-2018 IPR032466 Metal-dependent hydrolase M634_24420 094e6f3926cbe018f71974a43a7a43c1 342 PIRSF PIRSF001237 1 342 1.0E-142 T 12-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M634_24420 094e6f3926cbe018f71974a43a7a43c1 342 ProSitePatterns PS00483 Dihydroorotase signature 2. 244 255 - T 12-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M634_24420 094e6f3926cbe018f71974a43a7a43c1 342 ProSitePatterns PS00482 Dihydroorotase signature 1. 11 19 - T 12-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M634_24420 094e6f3926cbe018f71974a43a7a43c1 342 Hamap MF_00219 Dihydroorotase [pyrC]. 2 342 46.649 T 12-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 M634_23490 b23081d433a5f20c48ff68479fc7d203 397 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 203 220 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 M634_23490 b23081d433a5f20c48ff68479fc7d203 397 Gene3D G3DSA:3.30.420.40 198 397 3.0E-72 T 12-10-2018 M634_23490 b23081d433a5f20c48ff68479fc7d203 397 SUPERFAMILY SSF53067 5 196 2.37E-62 T 12-10-2018 M634_23490 b23081d433a5f20c48ff68479fc7d203 397 Pfam PF00871 Acetokinase family 6 391 1.0E-142 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 M634_23490 b23081d433a5f20c48ff68479fc7d203 397 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 1.3E-144 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 M634_23490 b23081d433a5f20c48ff68479fc7d203 397 PRINTS PR00471 Acetate kinase family signature 299 312 1.3E-44 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 M634_23490 b23081d433a5f20c48ff68479fc7d203 397 PRINTS PR00471 Acetate kinase family signature 321 337 1.3E-44 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 M634_23490 b23081d433a5f20c48ff68479fc7d203 397 PRINTS PR00471 Acetate kinase family signature 203 224 1.3E-44 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 M634_23490 b23081d433a5f20c48ff68479fc7d203 397 PRINTS PR00471 Acetate kinase family signature 6 17 1.3E-44 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 M634_23490 b23081d433a5f20c48ff68479fc7d203 397 PRINTS PR00471 Acetate kinase family signature 173 186 1.3E-44 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 M634_23490 b23081d433a5f20c48ff68479fc7d203 397 PRINTS PR00471 Acetate kinase family signature 378 390 1.3E-44 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 M634_23490 b23081d433a5f20c48ff68479fc7d203 397 Hamap MF_00020 Acetate kinase [ackA]. 1 397 169.188 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 M634_23490 b23081d433a5f20c48ff68479fc7d203 397 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 M634_23490 b23081d433a5f20c48ff68479fc7d203 397 SUPERFAMILY SSF53067 158 396 2.25E-78 T 12-10-2018 M634_23490 b23081d433a5f20c48ff68479fc7d203 397 PIRSF PIRSF000722 2 397 1.3E-132 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 M634_23490 b23081d433a5f20c48ff68479fc7d203 397 Gene3D G3DSA:3.30.420.40 3 195 1.6E-66 T 12-10-2018 M634_18090 611b42313ff2a1405e670ff162cc98ef 211 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 9 211 37.479 T 12-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 M634_18090 611b42313ff2a1405e670ff162cc98ef 211 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 33 116 6.0E-23 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 M634_18090 611b42313ff2a1405e670ff162cc98ef 211 PIRSF PIRSF000190 1 211 9.5E-81 T 12-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 M634_18090 611b42313ff2a1405e670ff162cc98ef 211 SUPERFAMILY SSF50475 11 211 6.17E-64 T 12-10-2018 M634_18090 611b42313ff2a1405e670ff162cc98ef 211 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 1 211 1.0E-88 T 12-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 M634_18090 611b42313ff2a1405e670ff162cc98ef 211 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 171 211 6.6E-19 T 12-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 M634_18090 611b42313ff2a1405e670ff162cc98ef 211 Gene3D G3DSA:2.30.110.10 13 211 4.1E-75 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 M634_18090 611b42313ff2a1405e670ff162cc98ef 211 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 181 194 - T 12-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 M634_11305 07068649de4fe80535b9d61705d3b54c 144 Gene3D G3DSA:3.30.479.10 25 144 1.9E-49 T 12-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 M634_11305 07068649de4fe80535b9d61705d3b54c 144 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 28 144 1.1E-35 T 12-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 M634_11305 07068649de4fe80535b9d61705d3b54c 144 SUPERFAMILY SSF55620 27 142 1.17E-40 T 12-10-2018 M634_11305 07068649de4fe80535b9d61705d3b54c 144 PIRSF PIRSF006113 24 144 7.0E-53 T 12-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 M634_11305 07068649de4fe80535b9d61705d3b54c 144 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 28 120 6.9E-33 T 12-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 M634_04150 13347c9e33a274ae49bc67a68365b15b 287 SUPERFAMILY SSF53790 12 232 4.97E-86 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 M634_04150 13347c9e33a274ae49bc67a68365b15b 287 Gene3D G3DSA:3.30.950.10 121 241 5.5E-45 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 M634_04150 13347c9e33a274ae49bc67a68365b15b 287 PIRSF PIRSF005917 1 286 2.0E-109 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 M634_04150 13347c9e33a274ae49bc67a68365b15b 287 Gene3D G3DSA:3.40.1010.10 2 120 5.7E-48 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 M634_04150 13347c9e33a274ae49bc67a68365b15b 287 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.707 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 M634_04150 13347c9e33a274ae49bc67a68365b15b 287 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 213 1.2E-29 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 M634_04150 13347c9e33a274ae49bc67a68365b15b 287 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 284 1.1E-103 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 M634_04150 13347c9e33a274ae49bc67a68365b15b 287 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 12-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 M634_11985 684006686aef5ff2805f7e7fdeca51a0 236 SUPERFAMILY SSF51120 9 203 4.45E-28 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal M634_11985 684006686aef5ff2805f7e7fdeca51a0 236 PRINTS PR00313 NodO calcium binding signature 88 96 2.4E-12 T 12-10-2018 M634_11985 684006686aef5ff2805f7e7fdeca51a0 236 PRINTS PR00313 NodO calcium binding signature 76 87 2.4E-12 T 12-10-2018 M634_11985 684006686aef5ff2805f7e7fdeca51a0 236 PRINTS PR00313 NodO calcium binding signature 106 114 2.4E-12 T 12-10-2018 M634_11985 684006686aef5ff2805f7e7fdeca51a0 236 PRINTS PR00313 NodO calcium binding signature 124 133 2.4E-12 T 12-10-2018 M634_11985 684006686aef5ff2805f7e7fdeca51a0 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 57 75 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site M634_11985 684006686aef5ff2805f7e7fdeca51a0 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 61 77 0.0036 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 M634_11985 684006686aef5ff2805f7e7fdeca51a0 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 79 95 0.4 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 M634_11985 684006686aef5ff2805f7e7fdeca51a0 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 43 59 0.0026 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 M634_11985 684006686aef5ff2805f7e7fdeca51a0 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 99 113 0.03 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 M634_11985 684006686aef5ff2805f7e7fdeca51a0 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 29 40 27.0 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 M634_11985 684006686aef5ff2805f7e7fdeca51a0 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 12 26 1.7 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 M634_11985 684006686aef5ff2805f7e7fdeca51a0 236 Gene3D G3DSA:2.150.10.10 55 95 2.6E-10 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal M634_11985 684006686aef5ff2805f7e7fdeca51a0 236 Gene3D G3DSA:2.150.10.10 96 229 9.6E-12 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal M634_11985 684006686aef5ff2805f7e7fdeca51a0 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 75 93 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site M634_11985 684006686aef5ff2805f7e7fdeca51a0 236 Gene3D G3DSA:2.150.10.10 5 54 1.2E-5 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal M634_11985 684006686aef5ff2805f7e7fdeca51a0 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 66 84 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site M634_11985 684006686aef5ff2805f7e7fdeca51a0 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 48 66 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site M634_20855 09ece0b4fa4f5d828b5baff92251cd1e 118 Pfam PF13411 MerR HTH family regulatory protein 1 67 4.3E-19 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M634_20855 09ece0b4fa4f5d828b5baff92251cd1e 118 Gene3D G3DSA:1.10.1660.10 1 118 1.5E-34 T 12-10-2018 M634_20855 09ece0b4fa4f5d828b5baff92251cd1e 118 SMART SM00422 1 70 1.6E-25 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M634_20855 09ece0b4fa4f5d828b5baff92251cd1e 118 SUPERFAMILY SSF46955 1 114 2.16E-32 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily M634_20855 09ece0b4fa4f5d828b5baff92251cd1e 118 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.1E-6 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M634_20855 09ece0b4fa4f5d828b5baff92251cd1e 118 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.1E-6 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M634_20855 09ece0b4fa4f5d828b5baff92251cd1e 118 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.1E-6 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M634_22265 47bee081a5f3d185f7da292c2d506c4d 413 Gene3D G3DSA:2.40.160.60 22 413 4.9E-127 T 12-10-2018 M634_22265 47bee081a5f3d185f7da292c2d506c4d 413 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 14 412 7.1E-134 T 12-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) M634_22265 47bee081a5f3d185f7da292c2d506c4d 413 SUPERFAMILY SSF56935 22 412 1.24E-93 T 12-10-2018 M634_10530 900d7dee3507134fb731e457843590bf 283 Pfam PF13276 HTH-like domain 42 96 2.1E-9 T 12-10-2018 IPR025948 HTH-like domain M634_10530 900d7dee3507134fb731e457843590bf 283 Pfam PF00665 Integrase core domain 121 234 4.2E-31 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M634_10530 900d7dee3507134fb731e457843590bf 283 Gene3D G3DSA:3.30.420.10 118 271 7.6E-18 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M634_10530 900d7dee3507134fb731e457843590bf 283 SUPERFAMILY SSF53098 120 280 2.43E-40 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M634_19935 8193cd321d36e09e257a3ec431f583dd 271 SMART SM00530 10 73 2.1E-4 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 M634_19935 8193cd321d36e09e257a3ec431f583dd 271 Pfam PF01381 Helix-turn-helix 12 67 2.6E-5 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 M634_19935 8193cd321d36e09e257a3ec431f583dd 271 SUPERFAMILY SSF47413 5 72 8.16E-9 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M634_19935 8193cd321d36e09e257a3ec431f583dd 271 Gene3D G3DSA:1.10.260.40 2 87 1.4E-10 T 12-10-2018 M634_22705 89353d81331f9b814e76e6dcfd23fc28 276 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 39 273 5.3E-46 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 M634_22705 89353d81331f9b814e76e6dcfd23fc28 276 PIRSF PIRSF015626 20 276 5.8E-65 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 M634_22705 89353d81331f9b814e76e6dcfd23fc28 276 Gene3D G3DSA:3.40.140.10 133 275 1.4E-37 T 12-10-2018 M634_22705 89353d81331f9b814e76e6dcfd23fc28 276 SUPERFAMILY SSF53927 36 274 8.72E-66 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 M634_22705 89353d81331f9b814e76e6dcfd23fc28 276 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 18 276 25.173 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 M634_22705 89353d81331f9b814e76e6dcfd23fc28 276 Gene3D G3DSA:3.10.20.10 43 128 3.9E-8 T 12-10-2018 M634_22705 89353d81331f9b814e76e6dcfd23fc28 276 Pfam PF02634 FdhD/NarQ family 42 273 1.7E-61 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 M634_06655 252b8585908c5f98633463e0cdec4c06 571 Pfam PF16582 Middle domain of thiamine pyrophosphate 188 396 3.2E-38 T 12-10-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 M634_06655 252b8585908c5f98633463e0cdec4c06 571 PIRSF PIRSF004983 3 571 3.1E-188 T 12-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 M634_06655 252b8585908c5f98633463e0cdec4c06 571 Gene3D G3DSA:3.40.50.1220 214 346 2.0E-41 T 12-10-2018 M634_06655 252b8585908c5f98633463e0cdec4c06 571 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 12 443 5.7E-131 T 12-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 M634_06655 252b8585908c5f98633463e0cdec4c06 571 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 422 549 2.6E-7 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 M634_06655 252b8585908c5f98633463e0cdec4c06 571 SUPERFAMILY SSF52518 9 175 3.27E-31 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold M634_06655 252b8585908c5f98633463e0cdec4c06 571 SUPERFAMILY SSF52467 221 346 4.36E-6 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily M634_06655 252b8585908c5f98633463e0cdec4c06 571 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 13 140 1.3E-30 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 M634_06655 252b8585908c5f98633463e0cdec4c06 571 Gene3D G3DSA:3.40.50.970 4 200 2.9E-57 T 12-10-2018 M634_06655 252b8585908c5f98633463e0cdec4c06 571 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 6 567 32.209 T 12-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 M634_06655 252b8585908c5f98633463e0cdec4c06 571 Gene3D G3DSA:3.40.50.970 366 568 3.0E-46 T 12-10-2018 M634_06655 252b8585908c5f98633463e0cdec4c06 571 SUPERFAMILY SSF52518 394 562 9.48E-24 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold M634_24070 9e095069bfa7f9b709cf7cffee8a1514 543 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 508 1.3E-41 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_24070 9e095069bfa7f9b709cf7cffee8a1514 543 Gene3D G3DSA:1.10.287.950 210 543 1.8E-77 T 12-10-2018 M634_24070 9e095069bfa7f9b709cf7cffee8a1514 543 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 172 5.4E-18 T 12-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain M634_24070 9e095069bfa7f9b709cf7cffee8a1514 543 SMART SM00283 280 541 1.8E-77 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_24070 9e095069bfa7f9b709cf7cffee8a1514 543 SMART SM00304 211 265 0.0074 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_24070 9e095069bfa7f9b709cf7cffee8a1514 543 SUPERFAMILY SSF58104 232 542 1.7E-75 T 12-10-2018 M634_24070 9e095069bfa7f9b709cf7cffee8a1514 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 407 436 1.2E-20 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M634_24070 9e095069bfa7f9b709cf7cffee8a1514 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 378 405 1.2E-20 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M634_24070 9e095069bfa7f9b709cf7cffee8a1514 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 301 330 1.2E-20 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M634_16925 08a71de7323836e890030b00f5af2445 786 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 649 752 4.3E-9 T 12-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 M634_16925 08a71de7323836e890030b00f5af2445 786 Gene3D G3DSA:3.40.50.300 5 173 4.3E-27 T 12-10-2018 M634_16925 08a71de7323836e890030b00f5af2445 786 Gene3D G3DSA:3.40.50.300 243 449 7.0E-56 T 12-10-2018 M634_16925 08a71de7323836e890030b00f5af2445 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 706 724 1.2E-6 T 12-10-2018 M634_16925 08a71de7323836e890030b00f5af2445 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 676 695 1.2E-6 T 12-10-2018 M634_16925 08a71de7323836e890030b00f5af2445 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 646 665 1.2E-6 T 12-10-2018 M634_16925 08a71de7323836e890030b00f5af2445 786 SUPERFAMILY SSF52540 30 546 3.02E-12 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_16925 08a71de7323836e890030b00f5af2445 786 Gene3D G3DSA:1.10.8.60 450 537 2.4E-13 T 12-10-2018 M634_16925 08a71de7323836e890030b00f5af2445 786 Gene3D G3DSA:3.30.230.10 541 767 2.6E-90 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M634_16925 08a71de7323836e890030b00f5af2445 786 SUPERFAMILY SSF54211 564 756 4.17E-35 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M634_16925 08a71de7323836e890030b00f5af2445 786 Pfam PF13654 AAA domain 25 539 8.2E-185 T 12-10-2018 M634_00165 2de8e9f83ac6c38cd9cdc7d59a594d3c 150 SUPERFAMILY SSF55653 60 148 1.05E-25 T 12-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily M634_00165 2de8e9f83ac6c38cd9cdc7d59a594d3c 150 Gene3D G3DSA:3.40.5.10 1 50 9.2E-24 T 12-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_00165 2de8e9f83ac6c38cd9cdc7d59a594d3c 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 1.7E-21 T 12-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_00165 2de8e9f83ac6c38cd9cdc7d59a594d3c 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 12-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_00165 2de8e9f83ac6c38cd9cdc7d59a594d3c 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 148 1.0E-55 T 12-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_00165 2de8e9f83ac6c38cd9cdc7d59a594d3c 150 Gene3D G3DSA:3.10.430.100 61 149 2.9E-31 T 12-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily M634_00165 2de8e9f83ac6c38cd9cdc7d59a594d3c 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 2.3E-25 T 12-10-2018 IPR020069 Ribosomal protein L9, C-terminal M634_00165 2de8e9f83ac6c38cd9cdc7d59a594d3c 150 SUPERFAMILY SSF55658 1 57 2.27E-19 T 12-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal M634_00165 2de8e9f83ac6c38cd9cdc7d59a594d3c 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 26.19 T 12-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_23050 a44768f64cdf105bef61fe790382b828 611 Gene3D G3DSA:3.55.50.10 109 199 1.9E-68 T 12-10-2018 M634_23050 a44768f64cdf105bef61fe790382b828 611 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 11 530 1.2E-167 T 12-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset M634_23050 a44768f64cdf105bef61fe790382b828 611 SUPERFAMILY SSF69279 212 372 1.21E-8 T 12-10-2018 M634_23050 a44768f64cdf105bef61fe790382b828 611 SUPERFAMILY SSF69349 450 602 1.02E-35 T 12-10-2018 M634_23050 a44768f64cdf105bef61fe790382b828 611 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 24 512 1.1E-105 T 12-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein M634_23050 a44768f64cdf105bef61fe790382b828 611 SUPERFAMILY SSF69279 12 195 1.19E-43 T 12-10-2018 M634_23050 a44768f64cdf105bef61fe790382b828 611 Pfam PF05954 Phage late control gene D protein (GPD) 30 335 1.4E-73 T 12-10-2018 M634_23050 a44768f64cdf105bef61fe790382b828 611 Gene3D G3DSA:3.30.1920.30 230 293 1.9E-68 T 12-10-2018 M634_23050 a44768f64cdf105bef61fe790382b828 611 Gene3D G3DSA:2.30.110.50 15 333 1.9E-68 T 12-10-2018 M634_23050 a44768f64cdf105bef61fe790382b828 611 Gene3D G3DSA:2.40.50.230 363 465 8.3E-43 T 12-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily M634_23050 a44768f64cdf105bef61fe790382b828 611 SUPERFAMILY SSF69255 372 460 6.02E-33 T 12-10-2018 M634_05700 a41227fd9f6c259085e05da6c3c6326a 196 SUPERFAMILY SSF53178 5 194 1.57E-69 T 12-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 M634_05700 a41227fd9f6c259085e05da6c3c6326a 196 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 191 8.9E-69 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 M634_05700 a41227fd9f6c259085e05da6c3c6326a 196 Gene3D G3DSA:3.40.50.1470 1 196 5.8E-77 T 12-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 M634_05700 a41227fd9f6c259085e05da6c3c6326a 196 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 112 122 - T 12-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 M634_05700 a41227fd9f6c259085e05da6c3c6326a 196 Pfam PF01195 Peptidyl-tRNA hydrolase 7 190 2.0E-53 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 M634_05700 a41227fd9f6c259085e05da6c3c6326a 196 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 5 184 35.725 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 M634_05700 a41227fd9f6c259085e05da6c3c6326a 196 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 18 31 - T 12-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 M634_06765 6fc3c087ea031cc4346dd48d5d34b5ec 154 SUPERFAMILY SSF46785 2 61 1.55E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_06765 6fc3c087ea031cc4346dd48d5d34b5ec 154 Gene3D G3DSA:3.30.70.920 56 140 1.0E-20 T 12-10-2018 M634_06765 6fc3c087ea031cc4346dd48d5d34b5ec 154 SMART SM00344 3 112 6.5E-44 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 M634_06765 6fc3c087ea031cc4346dd48d5d34b5ec 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 9.6E-13 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M634_06765 6fc3c087ea031cc4346dd48d5d34b5ec 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 9.6E-13 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M634_06765 6fc3c087ea031cc4346dd48d5d34b5ec 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 9.6E-13 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M634_06765 6fc3c087ea031cc4346dd48d5d34b5ec 154 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 12-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site M634_06765 6fc3c087ea031cc4346dd48d5d34b5ec 154 SUPERFAMILY SSF54909 63 152 1.57E-19 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel M634_06765 6fc3c087ea031cc4346dd48d5d34b5ec 154 Pfam PF01037 Lrp/AsnC ligand binding domain 70 142 2.7E-20 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain M634_06765 6fc3c087ea031cc4346dd48d5d34b5ec 154 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 8.2E-17 T 12-10-2018 M634_06765 6fc3c087ea031cc4346dd48d5d34b5ec 154 Gene3D G3DSA:1.10.10.10 4 55 5.7E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_21905 f5488dd20341092a4cd9791dc1c61e0c 586 Pfam PF00005 ABC transporter 363 511 3.2E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_21905 f5488dd20341092a4cd9791dc1c61e0c 586 Gene3D G3DSA:3.40.50.300 336 585 6.8E-94 T 12-10-2018 M634_21905 f5488dd20341092a4cd9791dc1c61e0c 586 SUPERFAMILY SSF90123 14 326 1.29E-74 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M634_21905 f5488dd20341092a4cd9791dc1c61e0c 586 Pfam PF00664 ABC transporter transmembrane region 29 291 1.7E-50 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 M634_21905 f5488dd20341092a4cd9791dc1c61e0c 586 SUPERFAMILY SSF52540 335 582 3.85E-91 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_21905 f5488dd20341092a4cd9791dc1c61e0c 586 ProSitePatterns PS00211 ABC transporters family signature. 483 497 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_21905 f5488dd20341092a4cd9791dc1c61e0c 586 SMART SM00382 371 557 2.4E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_21905 f5488dd20341092a4cd9791dc1c61e0c 586 Gene3D G3DSA:1.20.1560.10 9 333 2.6E-84 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M634_21905 f5488dd20341092a4cd9791dc1c61e0c 586 TIGRFAM TIGR02204 MsbA_rel: ABC transporter, permease/ATP-binding protein 7 582 9.4E-281 T 12-10-2018 IPR011918 ABC transporter, ATP-binding/permease protein M634_15550 c86c2a85447d37730ca880edd2a23b32 90 SUPERFAMILY SSF111148 1 89 8.89E-41 T 12-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 M634_15550 c86c2a85447d37730ca880edd2a23b32 90 PIRSF PIRSF029827 1 90 1.3E-43 T 12-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 M634_15550 c86c2a85447d37730ca880edd2a23b32 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 2.6E-42 T 12-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 M634_15550 c86c2a85447d37730ca880edd2a23b32 90 Gene3D G3DSA:1.10.3880.10 1 90 1.8E-39 T 12-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 M634_15550 c86c2a85447d37730ca880edd2a23b32 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 1.0E-39 T 12-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 M634_15550 c86c2a85447d37730ca880edd2a23b32 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.452 T 12-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 M634_09930 ad37586db4fd61e6293aa9e73b4abfef 288 Pfam PF03881 Fructosamine kinase 1 286 3.2E-125 T 12-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 M634_09930 ad37586db4fd61e6293aa9e73b4abfef 288 Gene3D G3DSA:3.30.200.20 1 93 1.1E-21 T 12-10-2018 M634_09930 ad37586db4fd61e6293aa9e73b4abfef 288 SUPERFAMILY SSF56112 3 282 3.64E-44 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily M634_09930 ad37586db4fd61e6293aa9e73b4abfef 288 Gene3D G3DSA:3.90.1200.10 99 288 4.4E-67 T 12-10-2018 M634_09930 ad37586db4fd61e6293aa9e73b4abfef 288 PIRSF PIRSF006221 1 288 8.2E-109 T 12-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 M634_07145 3de17b4415c9331de5f35d1839ed939a 334 SUPERFAMILY SSF47413 1 59 6.95E-18 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M634_07145 3de17b4415c9331de5f35d1839ed939a 334 Pfam PF13377 Periplasmic binding protein-like domain 170 330 7.2E-43 T 12-10-2018 M634_07145 3de17b4415c9331de5f35d1839ed939a 334 Gene3D G3DSA:3.40.50.2300 69 322 7.3E-92 T 12-10-2018 M634_07145 3de17b4415c9331de5f35d1839ed939a 334 Gene3D G3DSA:3.40.50.2300 161 323 7.3E-92 T 12-10-2018 M634_07145 3de17b4415c9331de5f35d1839ed939a 334 SMART SM00354 1 71 1.3E-38 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M634_07145 3de17b4415c9331de5f35d1839ed939a 334 SUPERFAMILY SSF53822 60 331 2.94E-94 T 12-10-2018 IPR028082 Periplasmic binding protein-like I M634_07145 3de17b4415c9331de5f35d1839ed939a 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 12-10-2018 M634_07145 3de17b4415c9331de5f35d1839ed939a 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.0E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M634_07145 3de17b4415c9331de5f35d1839ed939a 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.0E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M634_07145 3de17b4415c9331de5f35d1839ed939a 334 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 334 62.832 T 12-10-2018 IPR023588 Transcription regulator HTH, PurR GO:0006355 M634_07145 3de17b4415c9331de5f35d1839ed939a 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.8E-21 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M634_07145 3de17b4415c9331de5f35d1839ed939a 334 Gene3D G3DSA:1.10.260.40 3 59 9.1E-25 T 12-10-2018 M634_17270 5d27c97e8bf1bcbad2e3e93a83e40d39 309 Gene3D G3DSA:3.20.20.70 99 305 6.8E-56 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_17270 5d27c97e8bf1bcbad2e3e93a83e40d39 309 Gene3D G3DSA:3.20.20.70 1 74 2.9E-14 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_17270 5d27c97e8bf1bcbad2e3e93a83e40d39 309 ProSitePatterns PS01087 Radical activating enzymes signature. 13 34 - T 12-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 M634_17270 5d27c97e8bf1bcbad2e3e93a83e40d39 309 SUPERFAMILY SSF102114 135 275 1.0E-15 T 12-10-2018 M634_17270 5d27c97e8bf1bcbad2e3e93a83e40d39 309 Pfam PF13353 4Fe-4S single cluster domain 12 162 3.3E-11 T 12-10-2018 M634_17270 5d27c97e8bf1bcbad2e3e93a83e40d39 309 Pfam PF04055 Radical SAM superfamily 20 247 1.7E-21 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 M634_17270 5d27c97e8bf1bcbad2e3e93a83e40d39 309 PIRSF PIRSF000371 1 309 7.7E-119 T 12-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 M634_17270 5d27c97e8bf1bcbad2e3e93a83e40d39 309 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 3 298 4.4E-96 T 12-10-2018 M634_22085 e896fea67e9966724e1088dd225deb85 492 Gene3D G3DSA:2.40.33.10 70 170 2.0E-143 T 12-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M634_22085 e896fea67e9966724e1088dd225deb85 492 Pfam PF02887 Pyruvate kinase, alpha/beta domain 381 463 3.6E-8 T 12-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M634_22085 e896fea67e9966724e1088dd225deb85 492 Gene3D G3DSA:3.40.1380.20 340 471 2.0E-143 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M634_22085 e896fea67e9966724e1088dd225deb85 492 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 476 3.9E-149 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M634_22085 e896fea67e9966724e1088dd225deb85 492 SUPERFAMILY SSF52935 327 477 1.72E-20 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M634_22085 e896fea67e9966724e1088dd225deb85 492 Gene3D G3DSA:3.20.20.60 3 339 2.0E-143 T 12-10-2018 M634_22085 e896fea67e9966724e1088dd225deb85 492 PRINTS PR01050 Pyruvate kinase family signature 221 247 3.0E-54 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M634_22085 e896fea67e9966724e1088dd225deb85 492 PRINTS PR01050 Pyruvate kinase family signature 188 202 3.0E-54 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M634_22085 e896fea67e9966724e1088dd225deb85 492 PRINTS PR01050 Pyruvate kinase family signature 248 272 3.0E-54 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M634_22085 e896fea67e9966724e1088dd225deb85 492 PRINTS PR01050 Pyruvate kinase family signature 298 316 3.0E-54 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M634_22085 e896fea67e9966724e1088dd225deb85 492 PRINTS PR01050 Pyruvate kinase family signature 59 75 3.0E-54 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M634_22085 e896fea67e9966724e1088dd225deb85 492 PRINTS PR01050 Pyruvate kinase family signature 273 297 3.0E-54 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M634_22085 e896fea67e9966724e1088dd225deb85 492 PRINTS PR01050 Pyruvate kinase family signature 317 333 3.0E-54 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M634_22085 e896fea67e9966724e1088dd225deb85 492 Pfam PF00224 Pyruvate kinase, barrel domain 3 344 7.0E-128 T 12-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M634_22085 e896fea67e9966724e1088dd225deb85 492 SUPERFAMILY SSF51621 3 343 1.19E-87 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 M634_22085 e896fea67e9966724e1088dd225deb85 492 SUPERFAMILY SSF50800 71 168 4.54E-24 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily M634_06625 d11371a671a5f791dafa8c7eee6cbbad 183 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 24 171 2.1E-48 T 12-10-2018 IPR023826 Rhomboid-like serine protease, proteobacteria M634_06625 d11371a671a5f791dafa8c7eee6cbbad 183 Gene3D G3DSA:1.20.1540.10 1 181 1.9E-20 T 12-10-2018 IPR035952 Rhomboid-like superfamily M634_06625 d11371a671a5f791dafa8c7eee6cbbad 183 Pfam PF01694 Rhomboid family 34 173 4.1E-13 T 12-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 M634_06625 d11371a671a5f791dafa8c7eee6cbbad 183 SUPERFAMILY SSF144091 4 173 1.57E-27 T 12-10-2018 M634_17730 815902e5f5522452bc5eb03b3238712c 254 SUPERFAMILY SSF52540 2 227 1.18E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_17730 815902e5f5522452bc5eb03b3238712c 254 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_17730 815902e5f5522452bc5eb03b3238712c 254 Gene3D G3DSA:3.40.50.300 1 253 4.1E-71 T 12-10-2018 M634_17730 815902e5f5522452bc5eb03b3238712c 254 Pfam PF00005 ABC transporter 19 165 1.6E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_17730 815902e5f5522452bc5eb03b3238712c 254 SMART SM00382 26 213 1.3E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_04565 8266d4ad14e3f22f20e50f64a6698c85 242 Pfam PF00072 Response regulator receiver domain 5 112 9.5E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_04565 8266d4ad14e3f22f20e50f64a6698c85 242 Gene3D G3DSA:2.40.50.1020 149 241 2.3E-9 T 12-10-2018 M634_04565 8266d4ad14e3f22f20e50f64a6698c85 242 SMART SM00448 2 112 7.7E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_04565 8266d4ad14e3f22f20e50f64a6698c85 242 SMART SM00850 145 239 3.3E-24 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 M634_04565 8266d4ad14e3f22f20e50f64a6698c85 242 Gene3D G3DSA:3.40.50.2300 1 129 6.0E-29 T 12-10-2018 M634_04565 8266d4ad14e3f22f20e50f64a6698c85 242 Pfam PF04397 LytTr DNA-binding domain 146 238 2.4E-21 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 M634_04565 8266d4ad14e3f22f20e50f64a6698c85 242 SUPERFAMILY SSF52172 1 123 3.56E-28 T 12-10-2018 IPR011006 CheY-like superfamily M634_21585 ca82251230b3ecb8f72558419698f7cc 362 Gene3D G3DSA:1.25.40.10 28 231 5.7E-18 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_21585 ca82251230b3ecb8f72558419698f7cc 362 Pfam PF13432 Tetratricopeptide repeat 100 151 1.2E-4 T 12-10-2018 M634_21585 ca82251230b3ecb8f72558419698f7cc 362 SUPERFAMILY SSF48452 61 213 2.66E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_07430 42bc111cbcf90380fda72a00df66e0fe 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.8E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_07430 42bc111cbcf90380fda72a00df66e0fe 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.8E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_07430 42bc111cbcf90380fda72a00df66e0fe 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.8E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_07430 42bc111cbcf90380fda72a00df66e0fe 324 SUPERFAMILY SSF53850 91 322 2.99E-42 T 12-10-2018 M634_07430 42bc111cbcf90380fda72a00df66e0fe 324 Gene3D G3DSA:1.10.10.10 1 86 5.4E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_07430 42bc111cbcf90380fda72a00df66e0fe 324 Gene3D G3DSA:3.40.190.10 167 267 7.4E-98 T 12-10-2018 M634_07430 42bc111cbcf90380fda72a00df66e0fe 324 Gene3D G3DSA:3.40.190.10 93 303 7.4E-98 T 12-10-2018 M634_07430 42bc111cbcf90380fda72a00df66e0fe 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 1.9E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_07430 42bc111cbcf90380fda72a00df66e0fe 324 Pfam PF03466 LysR substrate binding domain 91 292 4.3E-39 T 12-10-2018 IPR005119 LysR, substrate-binding M634_07430 42bc111cbcf90380fda72a00df66e0fe 324 SUPERFAMILY SSF46785 1 113 5.75E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_15245 1c81ca19c1d305fa4579962335b2bee8 263 Gene3D G3DSA:1.10.287.1080 2 126 1.4E-45 T 12-10-2018 M634_15245 1c81ca19c1d305fa4579962335b2bee8 263 TIGRFAM TIGR00444 mazG: MazG family protein 11 260 9.1E-103 T 12-10-2018 IPR011551 NTP pyrophosphohydrolase MazG M634_15245 1c81ca19c1d305fa4579962335b2bee8 263 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 28 101 5.3E-28 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core M634_15245 1c81ca19c1d305fa4579962335b2bee8 263 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 171 233 8.6E-6 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core M634_15245 1c81ca19c1d305fa4579962335b2bee8 263 SUPERFAMILY SSF101386 138 237 8.41E-24 T 12-10-2018 M634_15245 1c81ca19c1d305fa4579962335b2bee8 263 Gene3D G3DSA:1.10.287.1080 132 263 1.8E-45 T 12-10-2018 M634_15245 1c81ca19c1d305fa4579962335b2bee8 263 SUPERFAMILY SSF101386 3 105 7.27E-25 T 12-10-2018 M634_21520 7bf4650c07f738134f5dd3850f8fd966 742 Gene3D G3DSA:1.10.1740.190 363 505 1.8E-29 T 12-10-2018 M634_21520 7bf4650c07f738134f5dd3850f8fd966 742 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 432 446 2.9E-21 T 12-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 M634_21520 7bf4650c07f738134f5dd3850f8fd966 742 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 516 531 2.9E-21 T 12-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 M634_21520 7bf4650c07f738134f5dd3850f8fd966 742 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 450 466 2.9E-21 T 12-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 M634_21520 7bf4650c07f738134f5dd3850f8fd966 742 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 492 510 2.9E-21 T 12-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 M634_21520 7bf4650c07f738134f5dd3850f8fd966 742 Gene3D G3DSA:2.60.120.380 642 740 1.2E-8 T 12-10-2018 M634_21520 7bf4650c07f738134f5dd3850f8fd966 742 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 658 728 2.0E-6 T 12-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial M634_21520 7bf4650c07f738134f5dd3850f8fd966 742 Gene3D G3DSA:1.10.390.20 506 633 6.2E-6 T 12-10-2018 M634_21520 7bf4650c07f738134f5dd3850f8fd966 742 Pfam PF08453 Peptidase family M9 N-terminal 87 270 2.3E-46 T 12-10-2018 IPR013661 Peptidase M9, collagenase, N-terminal domain M634_21520 7bf4650c07f738134f5dd3850f8fd966 742 Pfam PF01752 Collagenase 332 616 5.0E-109 T 12-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 M634_11955 9225d5e0ead0746171d601be346cdb29 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.8E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_11955 9225d5e0ead0746171d601be346cdb29 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.8E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_11955 9225d5e0ead0746171d601be346cdb29 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.8E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_11955 9225d5e0ead0746171d601be346cdb29 214 SUPERFAMILY SSF52172 2 132 1.18E-33 T 12-10-2018 IPR011006 CheY-like superfamily M634_11955 9225d5e0ead0746171d601be346cdb29 214 Pfam PF00072 Response regulator receiver domain 4 116 3.2E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_11955 9225d5e0ead0746171d601be346cdb29 214 SMART SM00421 146 203 2.0E-17 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_11955 9225d5e0ead0746171d601be346cdb29 214 SMART SM00448 2 115 8.3E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_11955 9225d5e0ead0746171d601be346cdb29 214 Gene3D G3DSA:3.40.50.12740 2 209 7.5E-60 T 12-10-2018 M634_11955 9225d5e0ead0746171d601be346cdb29 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 1.8E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_11955 9225d5e0ead0746171d601be346cdb29 214 SUPERFAMILY SSF46894 136 210 1.39E-18 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M634_11955 9225d5e0ead0746171d601be346cdb29 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_09380 9c8dbea4f86ec0ac3352f6a3f793dd05 350 SUPERFAMILY SSF51569 8 347 1.93E-130 T 12-10-2018 M634_09380 9c8dbea4f86ec0ac3352f6a3f793dd05 350 Gene3D G3DSA:3.20.20.70 1 350 4.0E-151 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_09380 9c8dbea4f86ec0ac3352f6a3f793dd05 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 348 2.7E-158 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 M634_09380 9c8dbea4f86ec0ac3352f6a3f793dd05 350 PIRSF PIRSF001361 1 350 2.2E-153 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 M634_09380 9c8dbea4f86ec0ac3352f6a3f793dd05 350 Pfam PF00793 DAHP synthetase I family 44 338 1.4E-98 T 12-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 M634_12260 5183b865e2a09ba9006b62d938da733c 376 Pfam PF03916 Polysulphide reductase, NrfD 9 318 6.7E-18 T 12-10-2018 IPR005614 NrfD family M634_03080 7db9b945f9d554159e0b4725bd148ef8 225 Gene3D G3DSA:2.40.360.10 26 224 1.5E-59 T 12-10-2018 IPR023373 YmcC-like superfamily M634_03080 7db9b945f9d554159e0b4725bd148ef8 225 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 25 219 3.6E-57 T 12-10-2018 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB M634_03080 7db9b945f9d554159e0b4725bd148ef8 225 SUPERFAMILY SSF159270 28 223 1.18E-57 T 12-10-2018 IPR023373 YmcC-like superfamily M634_16475 4cf8a0244d0af61d5822cf53b1d1d8d5 392 SUPERFAMILY SSF53850 24 391 5.69E-90 T 12-10-2018 M634_16475 4cf8a0244d0af61d5822cf53b1d1d8d5 392 Gene3D G3DSA:3.40.190.10 44 353 5.5E-135 T 12-10-2018 M634_16475 4cf8a0244d0af61d5822cf53b1d1d8d5 392 Pfam PF13416 Bacterial extracellular solute-binding protein 46 317 2.3E-44 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein M634_16475 4cf8a0244d0af61d5822cf53b1d1d8d5 392 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 129 146 - T 12-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 M634_16475 4cf8a0244d0af61d5822cf53b1d1d8d5 392 Gene3D G3DSA:3.40.190.10 134 384 5.5E-135 T 12-10-2018 M634_16475 4cf8a0244d0af61d5822cf53b1d1d8d5 392 PRINTS PR00181 Maltose binding protein signature 167 186 6.7E-80 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 M634_16475 4cf8a0244d0af61d5822cf53b1d1d8d5 392 PRINTS PR00181 Maltose binding protein signature 32 50 6.7E-80 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 M634_16475 4cf8a0244d0af61d5822cf53b1d1d8d5 392 PRINTS PR00181 Maltose binding protein signature 295 316 6.7E-80 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 M634_16475 4cf8a0244d0af61d5822cf53b1d1d8d5 392 PRINTS PR00181 Maltose binding protein signature 66 84 6.7E-80 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 M634_16475 4cf8a0244d0af61d5822cf53b1d1d8d5 392 PRINTS PR00181 Maltose binding protein signature 147 166 6.7E-80 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 M634_16475 4cf8a0244d0af61d5822cf53b1d1d8d5 392 PRINTS PR00181 Maltose binding protein signature 126 145 6.7E-80 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 M634_16475 4cf8a0244d0af61d5822cf53b1d1d8d5 392 PRINTS PR00181 Maltose binding protein signature 229 248 6.7E-80 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 M634_16475 4cf8a0244d0af61d5822cf53b1d1d8d5 392 PRINTS PR00181 Maltose binding protein signature 353 372 6.7E-80 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 M634_22965 82dcf634091f5f90f05df97833d6c998 484 Pfam PF05762 VWA domain containing CoxE-like protein 319 447 2.4E-11 T 12-10-2018 IPR008912 Uncharacterised protein family CoxE-like M634_22965 82dcf634091f5f90f05df97833d6c998 484 SUPERFAMILY SSF53300 318 475 1.32E-24 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily M634_22965 82dcf634091f5f90f05df97833d6c998 484 Gene3D G3DSA:3.40.50.410 322 468 1.0E-7 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily M634_06200 c212fb7931d7a0dfd8680b8aad92495a 180 SUPERFAMILY SSF47598 1 35 4.67E-14 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 M634_06200 c212fb7931d7a0dfd8680b8aad92495a 180 Gene3D G3DSA:1.20.1380.10 65 180 5.2E-48 T 12-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 M634_06200 c212fb7931d7a0dfd8680b8aad92495a 180 Pfam PF17206 SeqA protein N-terminal domain 1 36 1.4E-24 T 12-10-2018 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal M634_06200 c212fb7931d7a0dfd8680b8aad92495a 180 Gene3D G3DSA:1.10.1220.10 1 41 1.1E-24 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 M634_06200 c212fb7931d7a0dfd8680b8aad92495a 180 SUPERFAMILY SSF82808 67 179 2.48E-49 T 12-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 M634_06200 c212fb7931d7a0dfd8680b8aad92495a 180 Pfam PF03925 SeqA protein C-terminal domain 71 178 1.0E-46 T 12-10-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 M634_06200 c212fb7931d7a0dfd8680b8aad92495a 180 PIRSF PIRSF019401 1 180 5.4E-54 T 12-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 M634_06200 c212fb7931d7a0dfd8680b8aad92495a 180 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 180 41.771 T 12-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 M634_01875 b3238e9195fcc16e0a1ac4a0e0fc013c 631 Gene3D G3DSA:1.10.10.1800 459 550 1.9E-32 T 12-10-2018 M634_01875 b3238e9195fcc16e0a1ac4a0e0fc013c 631 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 12-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 M634_01875 b3238e9195fcc16e0a1ac4a0e0fc013c 631 Gene3D G3DSA:3.50.50.60 1 232 4.0E-91 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_01875 b3238e9195fcc16e0a1ac4a0e0fc013c 631 Gene3D G3DSA:3.50.50.60 296 458 1.7E-55 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_01875 b3238e9195fcc16e0a1ac4a0e0fc013c 631 SMART SM01228 546 617 2.5E-42 T 12-10-2018 M634_01875 b3238e9195fcc16e0a1ac4a0e0fc013c 631 SUPERFAMILY SSF51905 6 261 2.32E-52 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_01875 b3238e9195fcc16e0a1ac4a0e0fc013c 631 Pfam PF01134 Glucose inhibited division protein A 8 399 6.3E-170 T 12-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 M634_01875 b3238e9195fcc16e0a1ac4a0e0fc013c 631 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 2.6E-294 T 12-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 M634_01875 b3238e9195fcc16e0a1ac4a0e0fc013c 631 Gene3D G3DSA:1.10.150.570 569 622 5.2E-23 T 12-10-2018 M634_01875 b3238e9195fcc16e0a1ac4a0e0fc013c 631 Pfam PF13932 GidA associated domain 403 616 2.8E-76 T 12-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 M634_01875 b3238e9195fcc16e0a1ac4a0e0fc013c 631 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 12-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 M634_01875 b3238e9195fcc16e0a1ac4a0e0fc013c 631 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.724 T 12-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 M634_14175 95b32fade125251c5bcfa73903b4295c 450 Gene3D G3DSA:1.20.1250.20 11 219 2.5E-11 T 12-10-2018 M634_14175 95b32fade125251c5bcfa73903b4295c 450 Gene3D G3DSA:1.20.1250.20 248 441 4.8E-8 T 12-10-2018 M634_14175 95b32fade125251c5bcfa73903b4295c 450 SUPERFAMILY SSF103473 11 436 1.05E-33 T 12-10-2018 IPR036259 MFS transporter superfamily M634_14175 95b32fade125251c5bcfa73903b4295c 450 Pfam PF07690 Major Facilitator Superfamily 24 397 7.3E-17 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M634_02845 6b69b97ad3a81539f392c91031301969 254 PIRSF PIRSF028069 4 254 1.1E-96 T 12-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 M634_02845 6b69b97ad3a81539f392c91031301969 254 Pfam PF11932 Protein of unknown function (DUF3450) 12 249 8.9E-89 T 12-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 M634_16560 6246c94d074ac9c294f4729e7d8c639f 205 SUPERFAMILY SSF47616 72 197 1.25E-20 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily M634_16560 6246c94d074ac9c294f4729e7d8c639f 205 SUPERFAMILY SSF52833 1 77 8.98E-19 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M634_16560 6246c94d074ac9c294f4729e7d8c639f 205 Gene3D G3DSA:1.20.1050.10 84 198 9.6E-31 T 12-10-2018 M634_16560 6246c94d074ac9c294f4729e7d8c639f 205 Pfam PF00043 Glutathione S-transferase, C-terminal domain 120 192 4.9E-10 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal M634_16560 6246c94d074ac9c294f4729e7d8c639f 205 Gene3D G3DSA:3.40.30.10 1 82 7.2E-31 T 12-10-2018 M634_16560 6246c94d074ac9c294f4729e7d8c639f 205 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 73 2.9E-15 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 M634_20610 51ee1ced6eaf8a34b2e06316302a1f1e 1050 SUPERFAMILY SSF82693 565 674 3.66E-22 T 12-10-2018 M634_20610 51ee1ced6eaf8a34b2e06316302a1f1e 1050 Gene3D G3DSA:3.30.2090.10 180 277 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_20610 51ee1ced6eaf8a34b2e06316302a1f1e 1050 Gene3D G3DSA:1.20.1640.10 9 512 0.0 T 12-10-2018 M634_20610 51ee1ced6eaf8a34b2e06316302a1f1e 1050 SUPERFAMILY SSF82866 299 500 3.14E-48 T 12-10-2018 M634_20610 51ee1ced6eaf8a34b2e06316302a1f1e 1050 SUPERFAMILY SSF82714 184 273 1.05E-22 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_20610 51ee1ced6eaf8a34b2e06316302a1f1e 1050 Gene3D G3DSA:3.30.2090.10 724 812 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_20610 51ee1ced6eaf8a34b2e06316302a1f1e 1050 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1033 0.0 T 12-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 M634_20610 51ee1ced6eaf8a34b2e06316302a1f1e 1050 Gene3D G3DSA:1.20.1640.10 513 1027 0.0 T 12-10-2018 M634_20610 51ee1ced6eaf8a34b2e06316302a1f1e 1050 Pfam PF00873 AcrB/AcrD/AcrF family 3 1030 0.0 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_20610 51ee1ced6eaf8a34b2e06316302a1f1e 1050 SUPERFAMILY SSF82866 808 1035 1.96E-43 T 12-10-2018 M634_20610 51ee1ced6eaf8a34b2e06316302a1f1e 1050 Gene3D G3DSA:3.30.70.1320 134 334 0.0 T 12-10-2018 M634_20610 51ee1ced6eaf8a34b2e06316302a1f1e 1050 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 4.4E-89 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_20610 51ee1ced6eaf8a34b2e06316302a1f1e 1050 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 4.4E-89 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_20610 51ee1ced6eaf8a34b2e06316302a1f1e 1050 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 4.4E-89 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_20610 51ee1ced6eaf8a34b2e06316302a1f1e 1050 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 4.4E-89 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_20610 51ee1ced6eaf8a34b2e06316302a1f1e 1050 PRINTS PR00702 Acriflavin resistance protein family signature 473 496 4.4E-89 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_20610 51ee1ced6eaf8a34b2e06316302a1f1e 1050 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 4.4E-89 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_20610 51ee1ced6eaf8a34b2e06316302a1f1e 1050 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 4.4E-89 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_20610 51ee1ced6eaf8a34b2e06316302a1f1e 1050 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 4.4E-89 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_20610 51ee1ced6eaf8a34b2e06316302a1f1e 1050 PRINTS PR00702 Acriflavin resistance protein family signature 448 471 4.4E-89 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_20610 51ee1ced6eaf8a34b2e06316302a1f1e 1050 Gene3D G3DSA:3.30.70.1430 567 671 0.0 T 12-10-2018 M634_20610 51ee1ced6eaf8a34b2e06316302a1f1e 1050 SUPERFAMILY SSF82714 725 810 1.19E-19 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_20610 51ee1ced6eaf8a34b2e06316302a1f1e 1050 SUPERFAMILY SSF82693 136 332 4.19E-22 T 12-10-2018 M634_20610 51ee1ced6eaf8a34b2e06316302a1f1e 1050 Gene3D G3DSA:3.30.70.1440 672 869 0.0 T 12-10-2018 M634_20610 51ee1ced6eaf8a34b2e06316302a1f1e 1050 Gene3D G3DSA:3.30.70.1430 39 820 0.0 T 12-10-2018 M634_20610 51ee1ced6eaf8a34b2e06316302a1f1e 1050 SUPERFAMILY SSF82693 39 132 5.75E-26 T 12-10-2018 M634_11685 0409801b4b1a37410b0f585f25fc2948 466 Gene3D G3DSA:3.30.930.10 109 465 3.0E-109 T 12-10-2018 M634_11685 0409801b4b1a37410b0f585f25fc2948 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 3.5E-12 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 M634_11685 0409801b4b1a37410b0f585f25fc2948 466 SUPERFAMILY SSF50249 15 101 8.78E-17 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_11685 0409801b4b1a37410b0f585f25fc2948 466 SUPERFAMILY SSF55681 97 464 3.98E-95 T 12-10-2018 M634_11685 0409801b4b1a37410b0f585f25fc2948 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 45.922 T 12-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 M634_11685 0409801b4b1a37410b0f585f25fc2948 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 3.6E-81 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 M634_11685 0409801b4b1a37410b0f585f25fc2948 466 Gene3D G3DSA:2.40.50.140 3 106 1.0E-19 T 12-10-2018 M634_11685 0409801b4b1a37410b0f585f25fc2948 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 1.6E-14 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 M634_11685 0409801b4b1a37410b0f585f25fc2948 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 1.6E-14 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 M634_11685 0409801b4b1a37410b0f585f25fc2948 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 1.6E-14 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 M634_11685 0409801b4b1a37410b0f585f25fc2948 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 1.6E-14 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 M634_11685 0409801b4b1a37410b0f585f25fc2948 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 3.5E-207 T 12-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 M634_16965 04ff3669adac84a12a02cc3aa2598380 365 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 212 246 - T 12-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 M634_16965 04ff3669adac84a12a02cc3aa2598380 365 Pfam PF00924 Mechanosensitive ion channel 139 342 1.8E-55 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 M634_16965 04ff3669adac84a12a02cc3aa2598380 365 Gene3D G3DSA:3.30.70.100 249 346 8.9E-14 T 12-10-2018 M634_16965 04ff3669adac84a12a02cc3aa2598380 365 Gene3D G3DSA:2.30.30.60 196 248 3.1E-10 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily M634_16965 04ff3669adac84a12a02cc3aa2598380 365 SUPERFAMILY SSF82861 97 179 7.45E-14 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 M634_16965 04ff3669adac84a12a02cc3aa2598380 365 SUPERFAMILY SSF50182 180 247 6.54E-18 T 12-10-2018 IPR010920 LSM domain superfamily M634_16965 04ff3669adac84a12a02cc3aa2598380 365 SUPERFAMILY SSF82689 252 351 1.18E-18 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 M634_02200 4c5d8632664967d43009b7baa775eafd 137 Gene3D G3DSA:1.10.760.10 59 136 2.0E-33 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_02200 4c5d8632664967d43009b7baa775eafd 137 SUPERFAMILY SSF46626 60 134 8.33E-19 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_02200 4c5d8632664967d43009b7baa775eafd 137 PRINTS PR00607 Class IE cytochrome C signature 80 90 3.8E-14 T 12-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 M634_02200 4c5d8632664967d43009b7baa775eafd 137 PRINTS PR00607 Class IE cytochrome C signature 123 134 3.8E-14 T 12-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 M634_02200 4c5d8632664967d43009b7baa775eafd 137 PRINTS PR00607 Class IE cytochrome C signature 69 80 3.8E-14 T 12-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 M634_02200 4c5d8632664967d43009b7baa775eafd 137 PRINTS PR00607 Class IE cytochrome C signature 108 120 3.8E-14 T 12-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 M634_02200 4c5d8632664967d43009b7baa775eafd 137 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 59 133 2.2E-15 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_13375 fe9b8072f9651b024628935871250308 672 Gene3D G3DSA:3.40.50.150 7 253 3.2E-109 T 12-10-2018 M634_13375 fe9b8072f9651b024628935871250308 672 Gene3D G3DSA:3.50.50.60 265 663 3.6E-132 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_13375 fe9b8072f9651b024628935871250308 672 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 5 661 27.789 T 12-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 M634_13375 fe9b8072f9651b024628935871250308 672 Gene3D G3DSA:3.30.9.10 349 573 3.6E-132 T 12-10-2018 M634_13375 fe9b8072f9651b024628935871250308 672 Pfam PF01266 FAD dependent oxidoreductase 266 636 7.5E-45 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 M634_13375 fe9b8072f9651b024628935871250308 672 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 266 666 7.4E-155 T 12-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 M634_13375 fe9b8072f9651b024628935871250308 672 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 116 242 1.4E-47 T 12-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 M634_13375 fe9b8072f9651b024628935871250308 672 SUPERFAMILY SSF51905 266 663 6.15E-27 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_04450 e5470068de90117a27c6102da04960cf 505 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 14 504 2.2E-200 T 12-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 M634_04450 e5470068de90117a27c6102da04960cf 505 SUPERFAMILY SSF55681 156 502 2.3E-118 T 12-10-2018 M634_04450 e5470068de90117a27c6102da04960cf 505 SUPERFAMILY SSF50249 12 149 1.69E-33 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_04450 e5470068de90117a27c6102da04960cf 505 Pfam PF01336 OB-fold nucleic acid binding domain 68 140 1.9E-8 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 M634_04450 e5470068de90117a27c6102da04960cf 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 193 203 7.8E-38 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 M634_04450 e5470068de90117a27c6102da04960cf 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 386 402 7.8E-38 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 M634_04450 e5470068de90117a27c6102da04960cf 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 256 273 7.8E-38 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 M634_04450 e5470068de90117a27c6102da04960cf 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 209 225 7.8E-38 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 M634_04450 e5470068de90117a27c6102da04960cf 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 238 251 7.8E-38 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 M634_04450 e5470068de90117a27c6102da04960cf 505 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 19 504 43.154 T 12-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 M634_04450 e5470068de90117a27c6102da04960cf 505 Pfam PF00152 tRNA synthetases class II (D, K and N) 156 501 2.0E-80 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 M634_04450 e5470068de90117a27c6102da04960cf 505 Gene3D G3DSA:2.40.50.140 5 151 2.3E-29 T 12-10-2018 M634_04450 e5470068de90117a27c6102da04960cf 505 Gene3D G3DSA:3.30.930.10 152 505 1.7E-130 T 12-10-2018 M634_01755 7e042313c49c971d08662bc095a33a0d 313 Gene3D G3DSA:3.40.190.10 93 296 8.1E-71 T 12-10-2018 M634_01755 7e042313c49c971d08662bc095a33a0d 313 Gene3D G3DSA:1.10.10.10 3 91 8.5E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_01755 7e042313c49c971d08662bc095a33a0d 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 1.3E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_01755 7e042313c49c971d08662bc095a33a0d 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 1.3E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_01755 7e042313c49c971d08662bc095a33a0d 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 1.3E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_01755 7e042313c49c971d08662bc095a33a0d 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 2.5E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_01755 7e042313c49c971d08662bc095a33a0d 313 Pfam PF03466 LysR substrate binding domain 99 299 9.8E-23 T 12-10-2018 IPR005119 LysR, substrate-binding M634_01755 7e042313c49c971d08662bc095a33a0d 313 Gene3D G3DSA:3.40.190.10 172 271 8.1E-71 T 12-10-2018 M634_01755 7e042313c49c971d08662bc095a33a0d 313 SUPERFAMILY SSF53850 92 298 1.59E-41 T 12-10-2018 M634_01755 7e042313c49c971d08662bc095a33a0d 313 SUPERFAMILY SSF46785 7 88 2.4E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_02735 34444cb5857b19eb9bc7fa065a0952e7 241 Gene3D G3DSA:3.40.50.2020 99 240 8.0E-17 T 12-10-2018 M634_02735 34444cb5857b19eb9bc7fa065a0952e7 241 SUPERFAMILY SSF53271 67 239 1.18E-33 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like M634_02735 34444cb5857b19eb9bc7fa065a0952e7 241 Pfam PF00156 Phosphoribosyl transferase domain 145 237 5.6E-12 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 M634_10125 99b56077e7a46581827c1125e6ef9ba2 513 SMART SM01079 78 274 1.1E-34 T 12-10-2018 IPR006189 CHASE domain M634_10125 99b56077e7a46581827c1125e6ef9ba2 513 SUPERFAMILY SSF55073 362 511 4.79E-38 T 12-10-2018 IPR029787 Nucleotide cyclase M634_10125 99b56077e7a46581827c1125e6ef9ba2 513 SMART SM00267 346 512 7.9E-37 T 12-10-2018 IPR000160 GGDEF domain M634_10125 99b56077e7a46581827c1125e6ef9ba2 513 Pfam PF00990 Diguanylate cyclase, GGDEF domain 357 508 7.1E-34 T 12-10-2018 IPR000160 GGDEF domain M634_10125 99b56077e7a46581827c1125e6ef9ba2 513 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 353 511 5.8E-34 T 12-10-2018 IPR000160 GGDEF domain M634_10125 99b56077e7a46581827c1125e6ef9ba2 513 Pfam PF03924 CHASE domain 84 272 1.3E-26 T 12-10-2018 IPR006189 CHASE domain M634_10125 99b56077e7a46581827c1125e6ef9ba2 513 Gene3D G3DSA:3.30.70.270 351 512 3.3E-44 T 12-10-2018 M634_10125 99b56077e7a46581827c1125e6ef9ba2 513 Gene3D G3DSA:3.30.450.350 84 301 7.0E-8 T 12-10-2018 M634_07855 28751373615b5d15859ea3156615d870 351 Pfam PF00175 Oxidoreductase NAD-binding domain 126 233 1.1E-12 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 M634_07855 28751373615b5d15859ea3156615d870 351 Gene3D G3DSA:2.40.30.10 5 109 3.0E-24 T 12-10-2018 M634_07855 28751373615b5d15859ea3156615d870 351 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 300 308 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 M634_07855 28751373615b5d15859ea3156615d870 351 Pfam PF00970 Oxidoreductase FAD-binding domain 17 109 4.7E-16 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 M634_07855 28751373615b5d15859ea3156615d870 351 SUPERFAMILY SSF52343 118 253 2.49E-31 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M634_07855 28751373615b5d15859ea3156615d870 351 Gene3D G3DSA:3.40.50.80 115 258 4.5E-30 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M634_07855 28751373615b5d15859ea3156615d870 351 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 275 341 5.8E-11 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 M634_07855 28751373615b5d15859ea3156615d870 351 PRINTS PR00410 Phenol hydroxylase reductase family signature 125 144 1.9E-5 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 M634_07855 28751373615b5d15859ea3156615d870 351 PRINTS PR00410 Phenol hydroxylase reductase family signature 41 53 1.9E-5 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 M634_07855 28751373615b5d15859ea3156615d870 351 PRINTS PR00410 Phenol hydroxylase reductase family signature 219 227 1.9E-5 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 M634_07855 28751373615b5d15859ea3156615d870 351 Gene3D G3DSA:3.10.20.30 264 351 5.9E-21 T 12-10-2018 IPR012675 Beta-grasp domain superfamily M634_07855 28751373615b5d15859ea3156615d870 351 SUPERFAMILY SSF54292 242 350 5.37E-23 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 M634_07855 28751373615b5d15859ea3156615d870 351 SUPERFAMILY SSF63380 4 110 2.48E-27 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel M634_08875 18747af7f94d9528c7aaa0b76c7c69d6 421 TIGRFAM TIGR02407 ectoine_ectB: diaminobutyrate--2-oxoglutarate aminotransferase 2 410 9.3E-206 T 12-10-2018 IPR012773 Ectoine biosynthetic protein GO:0019491|GO:0030170|GO:0047307 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 M634_08875 18747af7f94d9528c7aaa0b76c7c69d6 421 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 230 266 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M634_08875 18747af7f94d9528c7aaa0b76c7c69d6 421 PIRSF PIRSF000521 174 412 3.9E-30 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M634_08875 18747af7f94d9528c7aaa0b76c7c69d6 421 PIRSF PIRSF000521 121 154 4.2 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M634_08875 18747af7f94d9528c7aaa0b76c7c69d6 421 PIRSF PIRSF000521 2 127 3.8E-4 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M634_08875 18747af7f94d9528c7aaa0b76c7c69d6 421 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 2 413 2.9E-149 T 12-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 M634_08875 18747af7f94d9528c7aaa0b76c7c69d6 421 Gene3D G3DSA:3.40.640.10 54 313 7.5E-105 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_08875 18747af7f94d9528c7aaa0b76c7c69d6 421 Pfam PF00202 Aminotransferase class-III 15 409 9.0E-80 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M634_08875 18747af7f94d9528c7aaa0b76c7c69d6 421 SUPERFAMILY SSF53383 7 410 4.32E-102 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_08875 18747af7f94d9528c7aaa0b76c7c69d6 421 Gene3D G3DSA:3.90.1150.10 5 405 7.5E-105 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M634_17295 81c909b3e14c1ba498e2ab8191104b5a 396 Pfam PF07690 Major Facilitator Superfamily 10 345 1.0E-40 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M634_17295 81c909b3e14c1ba498e2ab8191104b5a 396 ProSitePatterns PS00216 Sugar transport proteins signature 1. 58 75 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 M634_17295 81c909b3e14c1ba498e2ab8191104b5a 396 Hamap MF_01530 Multidrug resistance protein MdtL [mdtL]. 1 396 42.025 T 12-10-2018 IPR023697 Multidrug resistance protein MdtL GO:0005215|GO:0005886 M634_17295 81c909b3e14c1ba498e2ab8191104b5a 396 Gene3D G3DSA:1.20.1720.10 4 380 7.0E-71 T 12-10-2018 M634_17295 81c909b3e14c1ba498e2ab8191104b5a 396 SUPERFAMILY SSF103473 3 387 5.36E-52 T 12-10-2018 IPR036259 MFS transporter superfamily M634_15970 c0df892ac257d570f71c9f16565f7ceb 489 Gene3D G3DSA:3.40.1260.20 403 489 1.5E-6 T 12-10-2018 M634_15970 c0df892ac257d570f71c9f16565f7ceb 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 1.1E-173 T 12-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 M634_15970 c0df892ac257d570f71c9f16565f7ceb 489 Gene3D G3DSA:2.40.50.140 31 127 6.5E-32 T 12-10-2018 M634_15970 c0df892ac257d570f71c9f16565f7ceb 489 SUPERFAMILY SSF50249 39 128 1.35E-19 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_15970 c0df892ac257d570f71c9f16565f7ceb 489 Pfam PF10150 Ribonuclease E/G family 124 393 1.5E-104 T 12-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 M634_15970 c0df892ac257d570f71c9f16565f7ceb 489 SMART SM00316 37 122 5.8E-10 T 12-10-2018 IPR022967 RNA-binding domain, S1 M634_15970 c0df892ac257d570f71c9f16565f7ceb 489 Pfam PF00575 S1 RNA binding domain 38 109 5.7E-6 T 12-10-2018 IPR003029 S1 domain GO:0003676 M634_14475 48e54ccb3c849bd554a11b3b5bb03630 251 Pfam PF08666 SAF domain 45 105 4.6E-9 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 M634_14475 48e54ccb3c849bd554a11b3b5bb03630 251 SMART SM00858 44 106 1.1E-8 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 M634_14475 48e54ccb3c849bd554a11b3b5bb03630 251 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 7 245 1.3E-73 T 12-10-2018 IPR017592 Pilus assembly, Flp-type CpaB M634_14475 48e54ccb3c849bd554a11b3b5bb03630 251 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 113 216 6.3E-30 T 12-10-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain M634_01060 7b11ad036bee7863241edfe04e376fde 355 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 M634_01060 7b11ad036bee7863241edfe04e376fde 355 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 M634_01060 7b11ad036bee7863241edfe04e376fde 355 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 348 1.0E-139 T 12-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 M634_01060 7b11ad036bee7863241edfe04e376fde 355 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 350 50.787 T 12-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 M634_01060 7b11ad036bee7863241edfe04e376fde 355 Gene3D G3DSA:3.20.20.210 1 355 3.6E-159 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 M634_01060 7b11ad036bee7863241edfe04e376fde 355 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 348 9.1E-142 T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 M634_01060 7b11ad036bee7863241edfe04e376fde 355 SUPERFAMILY SSF51726 1 354 2.27E-123 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 M634_05520 43e5fe0c4c273a9427f2b9f2a8ad54ac 641 Gene3D G3DSA:3.90.1310.10 66 250 4.0E-54 T 12-10-2018 M634_05520 43e5fe0c4c273a9427f2b9f2a8ad54ac 641 SUPERFAMILY SSF56519 58 254 2.49E-56 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 M634_05520 43e5fe0c4c273a9427f2b9f2a8ad54ac 641 Gene3D G3DSA:3.30.1390.30 87 162 4.0E-54 T 12-10-2018 M634_05520 43e5fe0c4c273a9427f2b9f2a8ad54ac 641 SUPERFAMILY SSF56601 256 619 2.54E-96 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like M634_05520 43e5fe0c4c273a9427f2b9f2a8ad54ac 641 Pfam PF03717 Penicillin-binding Protein dimerisation domain 66 241 5.1E-52 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 M634_05520 43e5fe0c4c273a9427f2b9f2a8ad54ac 641 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 22 620 3.7E-240 T 12-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M634_05520 43e5fe0c4c273a9427f2b9f2a8ad54ac 641 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 5 624 53.74 T 12-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M634_05520 43e5fe0c4c273a9427f2b9f2a8ad54ac 641 Pfam PF00905 Penicillin binding protein transpeptidase domain 273 617 5.0E-76 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 M634_05520 43e5fe0c4c273a9427f2b9f2a8ad54ac 641 Gene3D G3DSA:3.40.710.10 251 629 5.0E-94 T 12-10-2018 M634_20615 49e5962d5d138753eaad6740ddab915d 589 SMART SM00283 324 585 7.6E-58 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_20615 49e5962d5d138753eaad6740ddab915d 589 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 372 551 2.4E-39 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_20615 49e5962d5d138753eaad6740ddab915d 589 Gene3D G3DSA:1.10.287.950 255 587 9.7E-64 T 12-10-2018 M634_20615 49e5962d5d138753eaad6740ddab915d 589 SUPERFAMILY SSF58104 278 586 7.46E-68 T 12-10-2018 M634_22585 154eedd4cdbd427f3512591617c599e9 145 Pfam PF11269 Protein of unknown function (DUF3069) 24 143 2.0E-53 T 12-10-2018 IPR021422 Protein of unknown function DUF3069 M634_22585 154eedd4cdbd427f3512591617c599e9 145 SUPERFAMILY SSF158675 1 145 1.15E-52 T 12-10-2018 IPR023132 Sama2622-like superfamily M634_21995 f5114b1d89b2d0264c8bfe12c6e2741e 372 Gene3D G3DSA:3.30.1360.120 7 231 7.9E-84 T 12-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 M634_21995 f5114b1d89b2d0264c8bfe12c6e2741e 372 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 6 366 4.5E-106 T 12-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 M634_21995 f5114b1d89b2d0264c8bfe12c6e2741e 372 Gene3D G3DSA:2.40.30.110 284 361 7.5E-28 T 12-10-2018 M634_21995 f5114b1d89b2d0264c8bfe12c6e2741e 372 PIRSF PIRSF006487 1 372 5.9E-79 T 12-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 M634_21995 f5114b1d89b2d0264c8bfe12c6e2741e 372 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 268 362 1.7E-21 T 12-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 M634_21995 f5114b1d89b2d0264c8bfe12c6e2741e 372 Pfam PF01571 Aminomethyltransferase folate-binding domain 10 254 1.0E-86 T 12-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain M634_21995 f5114b1d89b2d0264c8bfe12c6e2741e 372 Gene3D G3DSA:4.10.1250.10 233 281 2.6E-20 T 12-10-2018 M634_21995 f5114b1d89b2d0264c8bfe12c6e2741e 372 SUPERFAMILY SSF101790 279 371 1.96E-25 T 12-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal M634_21995 f5114b1d89b2d0264c8bfe12c6e2741e 372 SUPERFAMILY SSF103025 4 281 6.91E-89 T 12-10-2018 M634_21995 f5114b1d89b2d0264c8bfe12c6e2741e 372 Gene3D G3DSA:3.30.70.1400 56 139 7.9E-84 T 12-10-2018 M634_14750 ef46d70a756caa19dc5fbcd5dbddb9b1 371 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 63 357 4.1E-49 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 M634_14750 ef46d70a756caa19dc5fbcd5dbddb9b1 371 Gene3D G3DSA:2.40.420.20 289 356 8.2E-51 T 12-10-2018 M634_14750 ef46d70a756caa19dc5fbcd5dbddb9b1 371 Gene3D G3DSA:2.40.30.170 68 288 8.2E-51 T 12-10-2018 M634_14750 ef46d70a756caa19dc5fbcd5dbddb9b1 371 SUPERFAMILY SSF111369 69 284 2.09E-32 T 12-10-2018 M634_14750 ef46d70a756caa19dc5fbcd5dbddb9b1 371 Gene3D G3DSA:2.40.50.100 80 208 8.2E-51 T 12-10-2018 M634_14750 ef46d70a756caa19dc5fbcd5dbddb9b1 371 Gene3D G3DSA:1.10.287.470 115 174 8.2E-51 T 12-10-2018 M634_14750 ef46d70a756caa19dc5fbcd5dbddb9b1 371 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 67 273 3.2E-21 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M634_14840 23c172a15b22b8cc59f87d9107f54029 343 Pfam PF00005 ABC transporter 20 164 1.1E-36 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_14840 23c172a15b22b8cc59f87d9107f54029 343 Pfam PF08402 TOBE domain 276 341 3.3E-7 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 M634_14840 23c172a15b22b8cc59f87d9107f54029 343 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_14840 23c172a15b22b8cc59f87d9107f54029 343 Gene3D G3DSA:3.40.50.300 1 240 3.8E-78 T 12-10-2018 M634_14840 23c172a15b22b8cc59f87d9107f54029 343 SUPERFAMILY SSF52540 5 243 1.91E-82 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_14840 23c172a15b22b8cc59f87d9107f54029 343 SMART SM00382 29 214 5.8E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_14840 23c172a15b22b8cc59f87d9107f54029 343 SUPERFAMILY SSF50331 265 342 2.1E-9 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal M634_12245 3571b5e08ef9b60bb5ef9e523046f72d 203 ProSitePatterns PS00622 LuxR-type HTH domain signature. 156 183 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_12245 3571b5e08ef9b60bb5ef9e523046f72d 203 SMART SM00448 8 119 5.4E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_12245 3571b5e08ef9b60bb5ef9e523046f72d 203 Gene3D G3DSA:1.10.10.10 134 196 2.0E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_12245 3571b5e08ef9b60bb5ef9e523046f72d 203 SUPERFAMILY SSF46894 129 197 6.46E-17 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M634_12245 3571b5e08ef9b60bb5ef9e523046f72d 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 2.1E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_12245 3571b5e08ef9b60bb5ef9e523046f72d 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 2.1E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_12245 3571b5e08ef9b60bb5ef9e523046f72d 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 2.1E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_12245 3571b5e08ef9b60bb5ef9e523046f72d 203 SUPERFAMILY SSF52172 8 122 1.02E-29 T 12-10-2018 IPR011006 CheY-like superfamily M634_12245 3571b5e08ef9b60bb5ef9e523046f72d 203 Pfam PF00072 Response regulator receiver domain 10 119 2.8E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_12245 3571b5e08ef9b60bb5ef9e523046f72d 203 Pfam PF00196 Bacterial regulatory proteins, luxR family 141 193 8.2E-17 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_12245 3571b5e08ef9b60bb5ef9e523046f72d 203 SMART SM00421 139 196 1.0E-15 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_12245 3571b5e08ef9b60bb5ef9e523046f72d 203 Gene3D G3DSA:3.40.50.2300 3 129 1.3E-35 T 12-10-2018 M634_24030 6ab7894a226e4115a0ac6a8273b442a0 585 PIRSF PIRSF002741 409 583 0.0028 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 M634_24030 6ab7894a226e4115a0ac6a8273b442a0 585 PIRSF PIRSF002741 90 323 5.4E-30 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 M634_24030 6ab7894a226e4115a0ac6a8273b442a0 585 Gene3D G3DSA:3.40.190.10 122 339 1.4E-31 T 12-10-2018 M634_24030 6ab7894a226e4115a0ac6a8273b442a0 585 SUPERFAMILY SSF53850 116 583 9.05E-63 T 12-10-2018 M634_24030 6ab7894a226e4115a0ac6a8273b442a0 585 Pfam PF12793 Sugar transport-related sRNA regulator N-term 6 119 1.7E-32 T 12-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain M634_24030 6ab7894a226e4115a0ac6a8273b442a0 585 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 311 4.9E-23 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain M634_11480 15f26e65e62f890a402216d34b730871 80 SUPERFAMILY SSF143120 1 67 1.44E-8 T 12-10-2018 IPR036165 YefM-like superfamily M634_16045 e74d73463025ac32a113cf3c7f293af7 358 SMART SM00028 170 203 48.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_16045 e74d73463025ac32a113cf3c7f293af7 358 SMART SM00028 204 237 4.1 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_16045 e74d73463025ac32a113cf3c7f293af7 358 SMART SM00028 270 303 37.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_16045 e74d73463025ac32a113cf3c7f293af7 358 Gene3D G3DSA:1.25.40.10 138 353 5.2E-18 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_16045 e74d73463025ac32a113cf3c7f293af7 358 SUPERFAMILY SSF48452 175 331 4.17E-15 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_18300 d1a126efb7bf59831450ced2bde1fbc7 164 SUPERFAMILY SSF50891 2 162 8.77E-58 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily M634_18300 d1a126efb7bf59831450ced2bde1fbc7 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 161 9.4E-47 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 M634_18300 d1a126efb7bf59831450ced2bde1fbc7 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 7.2E-10 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 M634_18300 d1a126efb7bf59831450ced2bde1fbc7 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 7.2E-10 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 M634_18300 d1a126efb7bf59831450ced2bde1fbc7 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 7.2E-10 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 M634_18300 d1a126efb7bf59831450ced2bde1fbc7 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 12-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 M634_18300 d1a126efb7bf59831450ced2bde1fbc7 164 Gene3D G3DSA:2.40.100.10 1 163 1.9E-63 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily M634_18300 d1a126efb7bf59831450ced2bde1fbc7 164 PIRSF PIRSF001467 1 164 1.2E-26 T 12-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 M634_18220 6d82b78fa434d3713e4d687a5ea614ac 310 SUPERFAMILY SSF52540 5 254 1.65E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_18220 6d82b78fa434d3713e4d687a5ea614ac 310 Gene3D G3DSA:3.40.50.300 3 307 4.1E-80 T 12-10-2018 M634_18220 6d82b78fa434d3713e4d687a5ea614ac 310 Pfam PF00005 ABC transporter 30 184 6.0E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_18220 6d82b78fa434d3713e4d687a5ea614ac 310 SMART SM00382 39 233 7.3E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_18220 6d82b78fa434d3713e4d687a5ea614ac 310 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_18220 6d82b78fa434d3713e4d687a5ea614ac 310 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 265 3.7E-8 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 M634_04315 0c26d7d0891c55154b069fb57142c516 1517 Pfam PF01645 Conserved region in glutamate synthase 817 1187 1.1E-150 T 12-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 M634_04315 0c26d7d0891c55154b069fb57142c516 1517 Pfam PF00310 Glutamine amidotransferases class-II 21 443 1.2E-184 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain M634_04315 0c26d7d0891c55154b069fb57142c516 1517 Gene3D G3DSA:3.60.20.10 21 560 0.0 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal M634_04315 0c26d7d0891c55154b069fb57142c516 1517 Pfam PF04898 Glutamate synthase central domain 472 756 1.9E-117 T 12-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 M634_04315 0c26d7d0891c55154b069fb57142c516 1517 Gene3D G3DSA:3.20.20.70 498 1204 0.0 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_04315 0c26d7d0891c55154b069fb57142c516 1517 Pfam PF01493 GXGXG motif 1267 1452 1.9E-84 T 12-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 M634_04315 0c26d7d0891c55154b069fb57142c516 1517 Gene3D G3DSA:2.160.20.60 1239 1510 1.4E-109 T 12-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 M634_04315 0c26d7d0891c55154b069fb57142c516 1517 SUPERFAMILY SSF51395 452 1221 1.58E-268 T 12-10-2018 M634_04315 0c26d7d0891c55154b069fb57142c516 1517 Gene3D G3DSA:3.20.20.70 448 815 0.0 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_04315 0c26d7d0891c55154b069fb57142c516 1517 SUPERFAMILY SSF56235 21 447 7.72E-153 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal M634_04315 0c26d7d0891c55154b069fb57142c516 1517 SUPERFAMILY SSF69336 1235 1498 8.76E-96 T 12-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 M634_20105 a759de2a233a72d3de45a9a7dbb90b4e 382 Gene3D G3DSA:3.40.640.10 60 273 3.5E-111 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_20105 a759de2a233a72d3de45a9a7dbb90b4e 382 Gene3D G3DSA:3.90.1150.10 15 378 3.5E-111 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M634_20105 a759de2a233a72d3de45a9a7dbb90b4e 382 SUPERFAMILY SSF53383 3 380 1.22E-90 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_20105 a759de2a233a72d3de45a9a7dbb90b4e 382 Pfam PF00155 Aminotransferase class I and II 26 375 4.9E-32 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 M634_23265 74ea3d9a38302af4a6b88108cf931add 222 Pfam PF00072 Response regulator receiver domain 3 113 2.8E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_23265 74ea3d9a38302af4a6b88108cf931add 222 Gene3D G3DSA:1.10.10.10 126 222 1.3E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_23265 74ea3d9a38302af4a6b88108cf931add 222 Gene3D G3DSA:3.40.50.2300 1 124 9.1E-38 T 12-10-2018 M634_23265 74ea3d9a38302af4a6b88108cf931add 222 SUPERFAMILY SSF52172 1 166 3.56E-39 T 12-10-2018 IPR011006 CheY-like superfamily M634_23265 74ea3d9a38302af4a6b88108cf931add 222 SMART SM00448 1 113 5.0E-44 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_23265 74ea3d9a38302af4a6b88108cf931add 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 1.7E-18 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_23265 74ea3d9a38302af4a6b88108cf931add 222 SMART SM00862 146 220 7.9E-16 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_18065 3be4735c6bb05782e3b8453edc0d7882 235 Gene3D G3DSA:3.40.605.10 28 200 6.5E-8 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 M634_18065 3be4735c6bb05782e3b8453edc0d7882 235 SUPERFAMILY SSF53720 10 181 1.96E-9 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 M634_01015 cda334a293b3d23a3e3f3888cd7efbe5 429 SUPERFAMILY SSF56059 104 322 3.18E-68 T 12-10-2018 M634_01015 cda334a293b3d23a3e3f3888cd7efbe5 429 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 421 3.1E-29 T 12-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 M634_01015 cda334a293b3d23a3e3f3888cd7efbe5 429 SMART SM01210 330 423 2.7E-55 T 12-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 M634_01015 cda334a293b3d23a3e3f3888cd7efbe5 429 Gene3D G3DSA:3.90.600.10 330 429 7.3E-35 T 12-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 M634_01015 cda334a293b3d23a3e3f3888cd7efbe5 429 SUPERFAMILY SSF52440 1 103 7.91E-37 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily M634_01015 cda334a293b3d23a3e3f3888cd7efbe5 429 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 3.9E-35 T 12-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 M634_01015 cda334a293b3d23a3e3f3888cd7efbe5 429 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 12-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 M634_01015 cda334a293b3d23a3e3f3888cd7efbe5 429 SUPERFAMILY SSF51246 329 424 3.4E-33 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 M634_01015 cda334a293b3d23a3e3f3888cd7efbe5 429 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 1.4E-186 T 12-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 M634_01015 cda334a293b3d23a3e3f3888cd7efbe5 429 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 44.35 T 12-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 M634_01015 cda334a293b3d23a3e3f3888cd7efbe5 429 Gene3D G3DSA:3.30.1490.20 121 190 2.9E-29 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 M634_01015 cda334a293b3d23a3e3f3888cd7efbe5 429 Gene3D G3DSA:3.40.50.20 2 95 1.1E-37 T 12-10-2018 M634_01015 cda334a293b3d23a3e3f3888cd7efbe5 429 SMART SM01209 103 296 1.5E-142 T 12-10-2018 M634_01015 cda334a293b3d23a3e3f3888cd7efbe5 429 Gene3D G3DSA:3.30.470.20 191 329 1.9E-62 T 12-10-2018 M634_01015 cda334a293b3d23a3e3f3888cd7efbe5 429 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 9.4E-83 T 12-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 M634_06040 bd880675349fdee15227566742494969 877 Pfam PF07238 PilZ domain 702 802 8.7E-11 T 12-10-2018 IPR009875 PilZ domain GO:0035438 M634_06040 bd880675349fdee15227566742494969 877 Gene3D G3DSA:3.90.550.10 270 491 9.1E-79 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M634_06040 bd880675349fdee15227566742494969 877 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 155 841 2.0E-285 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 M634_06040 bd880675349fdee15227566742494969 877 SUPERFAMILY SSF141371 704 793 8.04E-7 T 12-10-2018 M634_06040 bd880675349fdee15227566742494969 877 PRINTS PR01439 Cellulose synthase subunit A signature 371 395 4.6E-56 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 M634_06040 bd880675349fdee15227566742494969 877 PRINTS PR01439 Cellulose synthase subunit A signature 675 696 4.6E-56 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 M634_06040 bd880675349fdee15227566742494969 877 PRINTS PR01439 Cellulose synthase subunit A signature 561 580 4.6E-56 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 M634_06040 bd880675349fdee15227566742494969 877 PRINTS PR01439 Cellulose synthase subunit A signature 601 620 4.6E-56 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 M634_06040 bd880675349fdee15227566742494969 877 PRINTS PR01439 Cellulose synthase subunit A signature 207 227 4.6E-56 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 M634_06040 bd880675349fdee15227566742494969 877 PRINTS PR01439 Cellulose synthase subunit A signature 235 260 4.6E-56 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 M634_06040 bd880675349fdee15227566742494969 877 PRINTS PR01439 Cellulose synthase subunit A signature 290 309 4.6E-56 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 M634_06040 bd880675349fdee15227566742494969 877 PRINTS PR01439 Cellulose synthase subunit A signature 532 558 4.6E-56 T 12-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 M634_06040 bd880675349fdee15227566742494969 877 SUPERFAMILY SSF53448 280 560 7.5E-52 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M634_06040 bd880675349fdee15227566742494969 877 Gene3D G3DSA:2.40.10.220 698 811 1.1E-9 T 12-10-2018 M634_06040 bd880675349fdee15227566742494969 877 Pfam PF00535 Glycosyl transferase family 2 286 455 1.2E-34 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 M634_15320 ac8bde41ed679740f654fdbb80c9e296 564 SUPERFAMILY SSF46977 449 549 3.01E-32 T 12-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M634_15320 ac8bde41ed679740f654fdbb80c9e296 564 SUPERFAMILY SSF51905 25 471 6.22E-76 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_15320 ac8bde41ed679740f654fdbb80c9e296 564 Pfam PF00890 FAD binding domain 34 416 2.9E-101 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 M634_15320 ac8bde41ed679740f654fdbb80c9e296 564 Gene3D G3DSA:3.50.50.60 34 428 3.9E-154 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_15320 ac8bde41ed679740f654fdbb80c9e296 564 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 31 544 4.2E-210 T 12-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 M634_15320 ac8bde41ed679740f654fdbb80c9e296 564 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 379 401 8.4E-9 T 12-10-2018 M634_15320 ac8bde41ed679740f654fdbb80c9e296 564 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 35 54 8.4E-9 T 12-10-2018 M634_15320 ac8bde41ed679740f654fdbb80c9e296 564 SUPERFAMILY SSF56425 262 377 3.89E-42 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 M634_15320 ac8bde41ed679740f654fdbb80c9e296 564 Pfam PF02910 Fumarate reductase flavoprotein C-term 465 546 1.5E-14 T 12-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M634_15320 ac8bde41ed679740f654fdbb80c9e296 564 Gene3D G3DSA:3.90.700.10 272 382 3.9E-154 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 M634_15320 ac8bde41ed679740f654fdbb80c9e296 564 Gene3D G3DSA:1.20.58.100 449 564 4.3E-45 T 12-10-2018 M634_15320 ac8bde41ed679740f654fdbb80c9e296 564 PIRSF PIRSF000171 23 285 1.6E-28 T 12-10-2018 M634_15320 ac8bde41ed679740f654fdbb80c9e296 564 PIRSF PIRSF000171 360 561 4.6E-13 T 12-10-2018 M634_14115 48b457f5af289a6d8b84c1d5113032b8 334 Gene3D G3DSA:3.10.520.20 15 334 5.1E-113 T 12-10-2018 M634_14115 48b457f5af289a6d8b84c1d5113032b8 334 PIRSF PIRSF006268 1 334 5.4E-94 T 12-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 M634_14115 48b457f5af289a6d8b84c1d5113032b8 334 Pfam PF02424 ApbE family 31 310 2.4E-86 T 12-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 M634_14115 48b457f5af289a6d8b84c1d5113032b8 334 SUPERFAMILY SSF143631 24 332 4.71E-101 T 12-10-2018 IPR003374 ApbE-like superfamily M634_06965 151427944effd2c345b9a706a87e26bf 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 239 1.3E-108 T 12-10-2018 IPR012838 Pyruvate formate-lyase 1 activating enzyme GO:0043365|GO:0055114 M634_06965 151427944effd2c345b9a706a87e26bf 246 Pfam PF13353 4Fe-4S single cluster domain 16 137 7.7E-21 T 12-10-2018 M634_06965 151427944effd2c345b9a706a87e26bf 246 SUPERFAMILY SSF102114 23 220 4.32E-30 T 12-10-2018 M634_06965 151427944effd2c345b9a706a87e26bf 246 Gene3D G3DSA:3.20.20.70 2 246 1.6E-105 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_06965 151427944effd2c345b9a706a87e26bf 246 Pfam PF04055 Radical SAM superfamily 24 178 5.5E-33 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 M634_06965 151427944effd2c345b9a706a87e26bf 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 12-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 M634_06965 151427944effd2c345b9a706a87e26bf 246 PIRSF PIRSF000371 44 245 1.9E-44 T 12-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 M634_06965 151427944effd2c345b9a706a87e26bf 246 PIRSF PIRSF000371 1 48 2.0E-11 T 12-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 M634_14855 53a1b436190fa28f64cfab2b9beb5461 409 SUPERFAMILY SSF111352 12 383 4.58E-105 T 12-10-2018 M634_14855 53a1b436190fa28f64cfab2b9beb5461 409 Gene3D G3DSA:1.10.3430.10 2 408 1.1E-118 T 12-10-2018 IPR029020 Ammonium/urea transporter M634_14855 53a1b436190fa28f64cfab2b9beb5461 409 ProSitePatterns PS01219 Ammonium transporters signature. 163 188 - T 12-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 M634_14855 53a1b436190fa28f64cfab2b9beb5461 409 TIGRFAM TIGR03644 marine_trans_1: probable ammonium transporter, marine subtype 12 405 9.8E-205 T 12-10-2018 IPR019879 Ammonium transporter, marine subtype M634_14855 53a1b436190fa28f64cfab2b9beb5461 409 Pfam PF00909 Ammonium Transporter Family 18 402 6.0E-101 T 12-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 M634_07155 113adc3ae8d269bb6202ab1d9d8df245 237 SMART SM00862 158 234 3.4E-19 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_07155 113adc3ae8d269bb6202ab1d9d8df245 237 SUPERFAMILY SSF52172 2 123 1.71E-36 T 12-10-2018 IPR011006 CheY-like superfamily M634_07155 113adc3ae8d269bb6202ab1d9d8df245 237 SMART SM00448 3 113 8.6E-37 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_07155 113adc3ae8d269bb6202ab1d9d8df245 237 Pfam PF00072 Response regulator receiver domain 5 113 2.5E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_07155 113adc3ae8d269bb6202ab1d9d8df245 237 Gene3D G3DSA:3.40.50.2300 1 136 1.4E-33 T 12-10-2018 M634_07155 113adc3ae8d269bb6202ab1d9d8df245 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 234 2.1E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_07155 113adc3ae8d269bb6202ab1d9d8df245 237 SUPERFAMILY SSF46894 134 235 1.47E-26 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M634_07155 113adc3ae8d269bb6202ab1d9d8df245 237 Gene3D G3DSA:1.10.10.10 137 237 5.6E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_01550 1ccb05e1542792183a272043f07bf96d 497 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 4 495 53.199 T 12-10-2018 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 M634_01550 1ccb05e1542792183a272043f07bf96d 497 Pfam PF02541 Ppx/GppA phosphatase family 23 303 7.3E-88 T 12-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 M634_01550 1ccb05e1542792183a272043f07bf96d 497 SUPERFAMILY SSF109604 309 495 7.85E-40 T 12-10-2018 M634_01550 1ccb05e1542792183a272043f07bf96d 497 SUPERFAMILY SSF53067 9 129 3.45E-36 T 12-10-2018 M634_01550 1ccb05e1542792183a272043f07bf96d 497 Gene3D G3DSA:3.30.420.150 114 291 6.9E-83 T 12-10-2018 M634_01550 1ccb05e1542792183a272043f07bf96d 497 Gene3D G3DSA:1.10.3210.10 306 497 6.3E-44 T 12-10-2018 M634_01550 1ccb05e1542792183a272043f07bf96d 497 Gene3D G3DSA:3.30.420.40 11 299 6.9E-83 T 12-10-2018 M634_01550 1ccb05e1542792183a272043f07bf96d 497 SUPERFAMILY SSF53067 134 305 5.29E-43 T 12-10-2018 M634_01550 1ccb05e1542792183a272043f07bf96d 497 PIRSF PIRSF001267 1 496 1.1E-176 T 12-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 M634_17130 47430d005d6879f32d443c54a4748242 571 Pfam PF01514 Secretory protein of YscJ/FliF family 39 230 4.5E-63 T 12-10-2018 IPR006182 Secretory protein YscJ/FliF M634_17130 47430d005d6879f32d443c54a4748242 571 Pfam PF08345 Flagellar M-ring protein C-terminal 264 418 4.1E-39 T 12-10-2018 IPR013556 Flagellar M-ring C-terminal M634_17130 47430d005d6879f32d443c54a4748242 571 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 29 560 2.4E-72 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 M634_17130 47430d005d6879f32d443c54a4748242 571 PRINTS PR01009 Flagellar M-ring protein signature 130 148 3.6E-26 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 M634_17130 47430d005d6879f32d443c54a4748242 571 PRINTS PR01009 Flagellar M-ring protein signature 348 372 3.6E-26 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 M634_17130 47430d005d6879f32d443c54a4748242 571 PRINTS PR01009 Flagellar M-ring protein signature 277 295 3.6E-26 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 M634_17130 47430d005d6879f32d443c54a4748242 571 PRINTS PR01009 Flagellar M-ring protein signature 162 176 3.6E-26 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 M634_17130 47430d005d6879f32d443c54a4748242 571 PRINTS PR01009 Flagellar M-ring protein signature 206 224 3.6E-26 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 M634_17130 47430d005d6879f32d443c54a4748242 571 PIRSF PIRSF004862 11 562 2.1E-127 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 M634_17130 47430d005d6879f32d443c54a4748242 571 Gene3D G3DSA:3.30.300.30 128 230 6.2E-12 T 12-10-2018 M634_14295 4170ea419995ac4583d63b42c3935d44 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 253 285 1.1E-11 T 12-10-2018 IPR001451 Hexapeptide repeat M634_14295 4170ea419995ac4583d63b42c3935d44 343 TIGRFAM TIGR03536 DapD_gpp: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 343 8.9E-181 T 12-10-2018 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria KEGG: 00300+2.3.1.117 M634_14295 4170ea419995ac4583d63b42c3935d44 343 SUPERFAMILY SSF51161 90 324 5.82E-35 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily M634_14295 4170ea419995ac4583d63b42c3935d44 343 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 131 171 1.3E-16 T 12-10-2018 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 M634_14295 4170ea419995ac4583d63b42c3935d44 343 Gene3D G3DSA:3.30.60.70 131 171 9.6E-21 T 12-10-2018 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily KEGG: 00300+2.3.1.117 M634_14295 4170ea419995ac4583d63b42c3935d44 343 Gene3D G3DSA:2.160.10.10 172 343 1.6E-69 T 12-10-2018 M634_14295 4170ea419995ac4583d63b42c3935d44 343 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 340 46.09 T 12-10-2018 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117 M634_14295 4170ea419995ac4583d63b42c3935d44 343 Gene3D G3DSA:3.30.70.2010 1 130 6.4E-39 T 12-10-2018 M634_01900 db2470a72f9ae4c0f613fc2abc1c8de6 270 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 35 263 1.1E-45 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_01900 db2470a72f9ae4c0f613fc2abc1c8de6 270 Pfam PF00119 ATP synthase A chain 44 262 8.3E-58 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_01900 db2470a72f9ae4c0f613fc2abc1c8de6 270 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 268 15.223 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_01900 db2470a72f9ae4c0f613fc2abc1c8de6 270 SUPERFAMILY SSF81336 93 262 9.55E-50 T 12-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_01900 db2470a72f9ae4c0f613fc2abc1c8de6 270 Gene3D G3DSA:1.20.120.220 92 268 2.6E-66 T 12-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_01900 db2470a72f9ae4c0f613fc2abc1c8de6 270 ProSitePatterns PS00449 ATP synthase a subunit signature. 203 212 - T 12-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_01900 db2470a72f9ae4c0f613fc2abc1c8de6 270 PRINTS PR00123 ATP synthase A subunit signature 200 222 2.3E-13 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_01900 db2470a72f9ae4c0f613fc2abc1c8de6 270 PRINTS PR00123 ATP synthase A subunit signature 101 117 2.3E-13 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_01900 db2470a72f9ae4c0f613fc2abc1c8de6 270 PRINTS PR00123 ATP synthase A subunit signature 248 263 2.3E-13 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_20575 c42ffd78fc2c567c9dafe09c3760ce1f 578 SMART SM00304 176 228 4.2E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_20575 c42ffd78fc2c567c9dafe09c3760ce1f 578 Gene3D G3DSA:1.10.287.130 176 281 2.7E-6 T 12-10-2018 M634_20575 c42ffd78fc2c567c9dafe09c3760ce1f 578 SUPERFAMILY SSF55874 447 567 1.96E-15 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_20575 c42ffd78fc2c567c9dafe09c3760ce1f 578 Pfam PF07730 Histidine kinase 369 437 7.5E-17 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 M634_20575 c42ffd78fc2c567c9dafe09c3760ce1f 578 PIRSF PIRSF003167 2 577 1.2E-178 T 12-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 M634_20575 c42ffd78fc2c567c9dafe09c3760ce1f 578 SMART SM00387 478 571 9.8E-9 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_20575 c42ffd78fc2c567c9dafe09c3760ce1f 578 SUPERFAMILY SSF158472 178 225 8.63E-8 T 12-10-2018 M634_20575 c42ffd78fc2c567c9dafe09c3760ce1f 578 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 34 128 2.2E-22 T 12-10-2018 IPR029095 NarX-like, N-terminal M634_20575 c42ffd78fc2c567c9dafe09c3760ce1f 578 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 480 568 3.6E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_20575 c42ffd78fc2c567c9dafe09c3760ce1f 578 Gene3D G3DSA:3.30.565.10 438 575 7.6E-26 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_20575 c42ffd78fc2c567c9dafe09c3760ce1f 578 Gene3D G3DSA:1.20.120.960 40 148 1.2E-11 T 12-10-2018 M634_22565 34bfc24bf17442d0945d1a2ee38a979e 122 Pfam PF10719 Late competence development protein ComFB 8 85 1.5E-16 T 12-10-2018 IPR019657 Late competence development protein ComFB M634_03195 6b8269c5bcc8705b67a87a536dd49060 256 Pfam PF00121 Triosephosphate isomerase 5 247 2.7E-87 T 12-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_03195 6b8269c5bcc8705b67a87a536dd49060 256 ProSitePatterns PS00171 Triosephosphate isomerase active site. 167 177 - T 12-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_03195 6b8269c5bcc8705b67a87a536dd49060 256 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 241 4.5E-78 T 12-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_03195 6b8269c5bcc8705b67a87a536dd49060 256 SUPERFAMILY SSF51351 2 250 5.89E-89 T 12-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_03195 6b8269c5bcc8705b67a87a536dd49060 256 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 250 59.393 T 12-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_03195 6b8269c5bcc8705b67a87a536dd49060 256 Gene3D G3DSA:3.20.20.70 1 256 4.9E-100 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_01300 dbcc22f39d7fc94a38c4506c3cd5a524 224 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_01300 dbcc22f39d7fc94a38c4506c3cd5a524 224 Pfam PF00005 ABC transporter 18 165 2.4E-36 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_01300 dbcc22f39d7fc94a38c4506c3cd5a524 224 Gene3D G3DSA:3.40.50.300 1 223 1.9E-61 T 12-10-2018 M634_01300 dbcc22f39d7fc94a38c4506c3cd5a524 224 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 6.5E-90 T 12-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 M634_01300 dbcc22f39d7fc94a38c4506c3cd5a524 224 SUPERFAMILY SSF52540 1 220 5.87E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_01300 dbcc22f39d7fc94a38c4506c3cd5a524 224 SMART SM00382 27 215 5.9E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_09130 608a654492405e609c26eae217dccc4a 297 SUPERFAMILY SSF140591 75 272 7.06E-51 T 12-10-2018 M634_09130 608a654492405e609c26eae217dccc4a 297 TIGRFAM TIGR02568 LcrE: type III secretion regulator YopN/LcrE/InvE/MxiC 37 285 1.4E-84 T 12-10-2018 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC GO:0009986|GO:0030254|GO:0050709 M634_09130 608a654492405e609c26eae217dccc4a 297 Pfam PF07201 HrpJ-like domain 60 226 2.1E-36 T 12-10-2018 IPR010812 Hypersensitivity response secretion-like, HrpJ GO:0009405|GO:0019867|GO:0046903 M634_09130 608a654492405e609c26eae217dccc4a 297 Gene3D G3DSA:1.10.150.630 174 261 2.0E-5 T 12-10-2018 M634_08135 074f2eddf243ec3032bef64a281476d4 367 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 11 366 9.3E-163 T 12-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 M634_08135 074f2eddf243ec3032bef64a281476d4 367 Gene3D G3DSA:3.90.1150.10 265 367 7.7E-41 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M634_08135 074f2eddf243ec3032bef64a281476d4 367 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 194 213 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site M634_08135 074f2eddf243ec3032bef64a281476d4 367 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 9 366 52.28 T 12-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 M634_08135 074f2eddf243ec3032bef64a281476d4 367 Pfam PF00266 Aminotransferase class-V 11 355 5.8E-63 T 12-10-2018 IPR000192 Aminotransferase class V domain M634_08135 074f2eddf243ec3032bef64a281476d4 367 Gene3D G3DSA:3.40.640.10 24 264 6.1E-93 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_08135 074f2eddf243ec3032bef64a281476d4 367 SUPERFAMILY SSF53383 10 364 1.36E-116 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_08135 074f2eddf243ec3032bef64a281476d4 367 PIRSF PIRSF000525 5 367 1.6E-153 T 12-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 M634_17780 4645449e0e580aabbea4e2b9df4c6920 400 PRINTS PR01182 Ornithine decarboxylase signature 53 80 5.0E-8 T 12-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 M634_17780 4645449e0e580aabbea4e2b9df4c6920 400 PRINTS PR01182 Ornithine decarboxylase signature 96 120 5.0E-8 T 12-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 M634_17780 4645449e0e580aabbea4e2b9df4c6920 400 PRINTS PR01182 Ornithine decarboxylase signature 365 378 5.0E-8 T 12-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 M634_17780 4645449e0e580aabbea4e2b9df4c6920 400 SUPERFAMILY SSF51419 32 285 8.58E-62 T 12-10-2018 IPR029066 PLP-binding barrel M634_17780 4645449e0e580aabbea4e2b9df4c6920 400 Gene3D G3DSA:2.40.37.10 264 399 1.8E-40 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 M634_17780 4645449e0e580aabbea4e2b9df4c6920 400 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 35 282 1.3E-31 T 12-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 M634_17780 4645449e0e580aabbea4e2b9df4c6920 400 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 283 378 4.3E-14 T 12-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 M634_17780 4645449e0e580aabbea4e2b9df4c6920 400 Gene3D G3DSA:3.20.20.10 34 263 4.0E-46 T 12-10-2018 IPR029066 PLP-binding barrel M634_17780 4645449e0e580aabbea4e2b9df4c6920 400 SUPERFAMILY SSF50621 246 398 3.77E-34 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 M634_17780 4645449e0e580aabbea4e2b9df4c6920 400 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 187 200 1.3E-8 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 M634_17780 4645449e0e580aabbea4e2b9df4c6920 400 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 1.3E-8 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 M634_17780 4645449e0e580aabbea4e2b9df4c6920 400 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 55 73 1.3E-8 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 M634_17780 4645449e0e580aabbea4e2b9df4c6920 400 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 75 87 1.3E-8 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 M634_14975 6f60030e8bc91aeb5afd6d326225c660 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 1.8E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_14975 6f60030e8bc91aeb5afd6d326225c660 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 1.8E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_14975 6f60030e8bc91aeb5afd6d326225c660 255 SMART SM00895 99 227 3.6E-18 T 12-10-2018 IPR011711 GntR, C-terminal M634_14975 6f60030e8bc91aeb5afd6d326225c660 255 SUPERFAMILY SSF48008 98 235 1.67E-20 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal M634_14975 6f60030e8bc91aeb5afd6d326225c660 255 Pfam PF07729 FCD domain 99 226 2.0E-18 T 12-10-2018 IPR011711 GntR, C-terminal M634_14975 6f60030e8bc91aeb5afd6d326225c660 255 Gene3D G3DSA:1.10.10.10 1 74 1.4E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_14975 6f60030e8bc91aeb5afd6d326225c660 255 Gene3D G3DSA:1.20.120.530 97 236 4.9E-27 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal M634_14975 6f60030e8bc91aeb5afd6d326225c660 255 SUPERFAMILY SSF46785 5 76 2.06E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_14975 6f60030e8bc91aeb5afd6d326225c660 255 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 2.4E-25 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_14975 6f60030e8bc91aeb5afd6d326225c660 255 SMART SM00345 15 74 9.1E-28 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_05695 38e2821c7b045494d37c7172ade9b96a 363 Gene3D G3DSA:3.40.50.300 4 278 6.0E-151 T 12-10-2018 M634_05695 38e2821c7b045494d37c7172ade9b96a 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 3.3E-39 T 12-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 M634_05695 38e2821c7b045494d37c7172ade9b96a 363 Gene3D G3DSA:3.10.20.30 48 362 6.0E-151 T 12-10-2018 IPR012675 Beta-grasp domain superfamily M634_05695 38e2821c7b045494d37c7172ade9b96a 363 Pfam PF01926 50S ribosome-binding GTPase 5 120 1.1E-21 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M634_05695 38e2821c7b045494d37c7172ade9b96a 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 2.6E-168 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 M634_05695 38e2821c7b045494d37c7172ade9b96a 363 SUPERFAMILY SSF52540 3 301 1.59E-83 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_05695 38e2821c7b045494d37c7172ade9b96a 363 Gene3D G3DSA:1.10.150.300 120 200 6.0E-151 T 12-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 M634_05695 38e2821c7b045494d37c7172ade9b96a 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 45.085 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 M634_05695 38e2821c7b045494d37c7172ade9b96a 363 SUPERFAMILY SSF81271 279 363 2.09E-36 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 M634_05695 38e2821c7b045494d37c7172ade9b96a 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 4.4E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M634_05695 38e2821c7b045494d37c7172ade9b96a 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 4.4E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M634_05695 38e2821c7b045494d37c7172ade9b96a 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 4.4E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M634_05695 38e2821c7b045494d37c7172ade9b96a 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 4.4E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M634_05695 38e2821c7b045494d37c7172ade9b96a 363 PIRSF PIRSF006641 1 363 3.1E-157 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 M634_23930 ce0c87b92937c0e184421734953abb59 397 Pfam PF07690 Major Facilitator Superfamily 17 349 1.0E-47 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M634_23930 ce0c87b92937c0e184421734953abb59 397 SUPERFAMILY SSF103473 4 387 2.62E-58 T 12-10-2018 IPR036259 MFS transporter superfamily M634_23930 ce0c87b92937c0e184421734953abb59 397 Gene3D G3DSA:1.20.1720.10 6 381 2.5E-84 T 12-10-2018 M634_23930 ce0c87b92937c0e184421734953abb59 397 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 6 377 9.8E-61 T 12-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 M634_17800 003d88c680be571f13279fe0d21d4c8e 480 Gene3D G3DSA:3.30.1360.60 400 479 4.3E-26 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 M634_17800 003d88c680be571f13279fe0d21d4c8e 480 Pfam PF02378 Phosphotransferase system, EIIC 14 322 7.1E-81 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 M634_17800 003d88c680be571f13279fe0d21d4c8e 480 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 417 434 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 M634_17800 003d88c680be571f13279fe0d21d4c8e 480 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 478 6.9E-234 T 12-10-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0016021|GO:1904659 M634_17800 003d88c680be571f13279fe0d21d4c8e 480 SUPERFAMILY SSF55604 404 476 1.83E-19 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 M634_17800 003d88c680be571f13279fe0d21d4c8e 480 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 380 463 1.4E-16 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 M634_17800 003d88c680be571f13279fe0d21d4c8e 480 Pfam PF00367 phosphotransferase system, EIIB 408 439 1.6E-13 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 M634_00350 b7227f3693964d754792ef9adff4e7f9 91 Pfam PF04077 DsrH like protein 10 86 7.1E-24 T 12-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 M634_00350 b7227f3693964d754792ef9adff4e7f9 91 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 3 90 6.9E-28 T 12-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 M634_00350 b7227f3693964d754792ef9adff4e7f9 91 SUPERFAMILY SSF75169 1 90 7.07E-24 T 12-10-2018 IPR027396 DsrEFH-like M634_00350 b7227f3693964d754792ef9adff4e7f9 91 Gene3D G3DSA:3.40.1260.10 1 90 1.2E-26 T 12-10-2018 IPR027396 DsrEFH-like M634_09920 abae499a85e8f4df778118f8aa7f000b 320 Pfam PF00990 Diguanylate cyclase, GGDEF domain 158 313 3.4E-43 T 12-10-2018 IPR000160 GGDEF domain M634_09920 abae499a85e8f4df778118f8aa7f000b 320 SMART SM00267 145 317 1.8E-57 T 12-10-2018 IPR000160 GGDEF domain M634_09920 abae499a85e8f4df778118f8aa7f000b 320 Gene3D G3DSA:3.30.450.20 11 142 5.5E-29 T 12-10-2018 M634_09920 abae499a85e8f4df778118f8aa7f000b 320 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 154 316 1.6E-53 T 12-10-2018 IPR000160 GGDEF domain M634_09920 abae499a85e8f4df778118f8aa7f000b 320 SUPERFAMILY SSF55785 13 93 6.98E-8 T 12-10-2018 IPR035965 PAS domain superfamily M634_09920 abae499a85e8f4df778118f8aa7f000b 320 Gene3D G3DSA:3.30.70.270 150 319 8.8E-56 T 12-10-2018 M634_09920 abae499a85e8f4df778118f8aa7f000b 320 SUPERFAMILY SSF55073 161 317 7.53E-50 T 12-10-2018 IPR029787 Nucleotide cyclase M634_23310 7be3174fbd1d63df35b2a4e532d20600 364 Gene3D G3DSA:3.40.50.970 1 351 4.8E-102 T 12-10-2018 M634_23310 7be3174fbd1d63df35b2a4e532d20600 364 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 8 350 3.0E-135 T 12-10-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 M634_23310 7be3174fbd1d63df35b2a4e532d20600 364 Pfam PF00676 Dehydrogenase E1 component 36 328 1.2E-74 T 12-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 M634_23310 7be3174fbd1d63df35b2a4e532d20600 364 SUPERFAMILY SSF52518 22 357 2.32E-92 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold M634_11910 6ee14c23292c7c08a9c03a58c543779d 377 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 6 370 1.9E-162 T 12-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 M634_11910 6ee14c23292c7c08a9c03a58c543779d 377 PIRSF PIRSF038941 1 372 1.6E-125 T 12-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 M634_11910 6ee14c23292c7c08a9c03a58c543779d 377 SUPERFAMILY SSF51419 14 242 5.23E-42 T 12-10-2018 IPR029066 PLP-binding barrel M634_11910 6ee14c23292c7c08a9c03a58c543779d 377 Gene3D G3DSA:3.20.20.10 15 242 2.9E-141 T 12-10-2018 IPR029066 PLP-binding barrel M634_11910 6ee14c23292c7c08a9c03a58c543779d 377 Gene3D G3DSA:2.40.37.10 7 372 2.9E-141 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 M634_11910 6ee14c23292c7c08a9c03a58c543779d 377 SUPERFAMILY SSF50621 212 359 6.49E-23 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 M634_02190 39441040cdb855ecc527bfbb764a6854 193 SUPERFAMILY SSF46689 6 83 4.49E-19 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_02190 39441040cdb855ecc527bfbb764a6854 193 Gene3D G3DSA:1.10.357.10 1 193 1.7E-83 T 12-10-2018 M634_02190 39441040cdb855ecc527bfbb764a6854 193 Pfam PF16295 Tetracycline repressor, C-terminal all-alpha domain 65 190 2.7E-7 T 12-10-2018 IPR032551 HTH-type transcriptional repressor, C-terminal M634_02190 39441040cdb855ecc527bfbb764a6854 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 2.2E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M634_02190 39441040cdb855ecc527bfbb764a6854 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 2.2E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M634_02190 39441040cdb855ecc527bfbb764a6854 193 ProSitePatterns PS01081 TetR-type HTH domain signature. 25 56 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site M634_02190 39441040cdb855ecc527bfbb764a6854 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 8.8E-18 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M634_03180 ce3cc0d6107c19e6f6cb00ed8080ca93 388 SMART SM00984 300 387 4.0E-14 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 M634_03180 ce3cc0d6107c19e6f6cb00ed8080ca93 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 169 1.5E-33 T 12-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 M634_03180 ce3cc0d6107c19e6f6cb00ed8080ca93 388 PIRSF PIRSF500134 338 388 0.018 T 12-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 M634_03180 ce3cc0d6107c19e6f6cb00ed8080ca93 388 PIRSF PIRSF500134 1 343 2.5E-122 T 12-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 M634_03180 ce3cc0d6107c19e6f6cb00ed8080ca93 388 SUPERFAMILY SSF48179 191 287 7.31E-31 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 M634_03180 ce3cc0d6107c19e6f6cb00ed8080ca93 388 Gene3D G3DSA:3.40.50.720 222 388 1.6E-68 T 12-10-2018 M634_03180 ce3cc0d6107c19e6f6cb00ed8080ca93 388 SUPERFAMILY SSF52413 283 387 2.88E-28 T 12-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 M634_03180 ce3cc0d6107c19e6f6cb00ed8080ca93 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 377 3.5E-106 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 M634_03180 ce3cc0d6107c19e6f6cb00ed8080ca93 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 374 6.8E-9 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 M634_03180 ce3cc0d6107c19e6f6cb00ed8080ca93 388 Gene3D G3DSA:1.20.5.100 194 220 6.9E-20 T 12-10-2018 M634_03180 ce3cc0d6107c19e6f6cb00ed8080ca93 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 2.5E-27 T 12-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 M634_03180 ce3cc0d6107c19e6f6cb00ed8080ca93 388 SUPERFAMILY SSF51735 1 194 3.95E-48 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_03180 ce3cc0d6107c19e6f6cb00ed8080ca93 388 PIRSF PIRSF000124 1 388 5.9E-138 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 M634_03180 ce3cc0d6107c19e6f6cb00ed8080ca93 388 Gene3D G3DSA:3.40.50.720 1 193 2.4E-60 T 12-10-2018 M634_22945 804fca3f7bca9ed523a5024f3a9b596b 568 Gene3D G3DSA:3.30.1370.20 431 515 5.9E-39 T 12-10-2018 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 M634_22945 804fca3f7bca9ed523a5024f3a9b596b 568 Pfam PF09330 D-lactate dehydrogenase, membrane binding 273 562 5.8E-136 T 12-10-2018 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 M634_22945 804fca3f7bca9ed523a5024f3a9b596b 568 Hamap MF_02092 Quinone-dependent D-lactate dehydrogenase [dld]. 4 564 54.95 T 12-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 M634_22945 804fca3f7bca9ed523a5024f3a9b596b 568 SUPERFAMILY SSF55103 270 561 7.41E-106 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 M634_22945 804fca3f7bca9ed523a5024f3a9b596b 568 Gene3D G3DSA:3.30.43.10 1 96 3.3E-14 T 12-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 M634_22945 804fca3f7bca9ed523a5024f3a9b596b 568 PIRSF PIRSF000101 1 566 7.6E-304 T 12-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 M634_22945 804fca3f7bca9ed523a5024f3a9b596b 568 SUPERFAMILY SSF56176 4 268 3.49E-67 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 M634_22945 804fca3f7bca9ed523a5024f3a9b596b 568 Pfam PF01565 FAD binding domain 41 160 1.6E-9 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 M634_22945 804fca3f7bca9ed523a5024f3a9b596b 568 Gene3D G3DSA:3.30.70.610 264 347 1.5E-16 T 12-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 M634_22945 804fca3f7bca9ed523a5024f3a9b596b 568 Gene3D G3DSA:3.30.70.610 368 430 4.2E-17 T 12-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 M634_22945 804fca3f7bca9ed523a5024f3a9b596b 568 Gene3D G3DSA:3.30.465.10 100 263 9.6E-72 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 M634_21420 7285d7e1db88147a93c00f9f732b42af 130 Gene3D G3DSA:3.40.190.10 95 118 1.3E-14 T 12-10-2018 M634_21420 7285d7e1db88147a93c00f9f732b42af 130 Pfam PF03466 LysR substrate binding domain 28 122 8.3E-7 T 12-10-2018 IPR005119 LysR, substrate-binding M634_21420 7285d7e1db88147a93c00f9f732b42af 130 Gene3D G3DSA:3.40.190.10 11 94 1.3E-14 T 12-10-2018 M634_21420 7285d7e1db88147a93c00f9f732b42af 130 SUPERFAMILY SSF53850 34 120 1.18E-11 T 12-10-2018 M634_12580 cadf04b48719dd9d7d34477137484979 486 SMART SM00267 321 486 8.5E-40 T 12-10-2018 IPR000160 GGDEF domain M634_12580 cadf04b48719dd9d7d34477137484979 486 SUPERFAMILY SSF55073 337 486 5.1E-37 T 12-10-2018 IPR029787 Nucleotide cyclase M634_12580 cadf04b48719dd9d7d34477137484979 486 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 330 484 2.4E-42 T 12-10-2018 IPR000160 GGDEF domain M634_12580 cadf04b48719dd9d7d34477137484979 486 Pfam PF00990 Diguanylate cyclase, GGDEF domain 332 483 2.3E-37 T 12-10-2018 IPR000160 GGDEF domain M634_12580 cadf04b48719dd9d7d34477137484979 486 Gene3D G3DSA:3.30.70.270 319 486 9.2E-46 T 12-10-2018 M634_03485 41e60ab8f2713c286e63716b2807b082 164 Pfam PF11736 Protein of unknown function (DUF3299) 30 159 1.1E-43 T 12-10-2018 IPR021727 Protein of unknown function DUF3299 M634_03485 41e60ab8f2713c286e63716b2807b082 164 Gene3D G3DSA:2.40.50.870 23 164 4.7E-46 T 12-10-2018 M634_11845 e19273358c33c2af62b29b32d6086802 228 Pfam PF13247 4Fe-4S dicluster domain 88 186 4.2E-26 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M634_11845 e19273358c33c2af62b29b32d6086802 228 Gene3D G3DSA:3.30.70.20 26 75 1.9E-6 T 12-10-2018 M634_11845 e19273358c33c2af62b29b32d6086802 228 Gene3D G3DSA:3.30.70.20 76 228 2.9E-55 T 12-10-2018 M634_11845 e19273358c33c2af62b29b32d6086802 228 Pfam PF12800 4Fe-4S binding domain 49 61 0.95 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M634_11845 e19273358c33c2af62b29b32d6086802 228 TIGRFAM TIGR03149 cyt_nit_nrfC: cytochrome c nitrite reductase, Fe-S protein 2 227 2.4E-132 T 12-10-2018 IPR017567 Cytochrome c nitrite reductase, Fe-S protein M634_11845 e19273358c33c2af62b29b32d6086802 228 SUPERFAMILY SSF54862 39 221 1.88E-64 T 12-10-2018 M634_11845 e19273358c33c2af62b29b32d6086802 228 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 130 141 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M634_18235 b75641e59bf21f122b4e4ddf45e376b6 251 SUPERFAMILY SSF53850 24 251 2.44E-25 T 12-10-2018 M634_18235 b75641e59bf21f122b4e4ddf45e376b6 251 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 251 4.4E-13 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M634_18235 b75641e59bf21f122b4e4ddf45e376b6 251 Gene3D G3DSA:3.40.190.10 110 212 2.0E-17 T 12-10-2018 M634_18235 b75641e59bf21f122b4e4ddf45e376b6 251 Gene3D G3DSA:3.40.190.10 33 250 2.0E-17 T 12-10-2018 M634_06140 7d0d1d5b687414fd5ddc4abb98955b0a 166 SMART SM00738 1 101 1.5E-27 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 M634_06140 7d0d1d5b687414fd5ddc4abb98955b0a 166 Pfam PF02357 Transcription termination factor nusG 2 94 3.0E-20 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 M634_06140 7d0d1d5b687414fd5ddc4abb98955b0a 166 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 166 47.907 T 12-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 M634_06140 7d0d1d5b687414fd5ddc4abb98955b0a 166 SUPERFAMILY SSF50104 115 163 6.22E-6 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily M634_06140 7d0d1d5b687414fd5ddc4abb98955b0a 166 SUPERFAMILY SSF82679 1 101 3.92E-29 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 M634_06140 7d0d1d5b687414fd5ddc4abb98955b0a 166 Gene3D G3DSA:3.30.70.940 1 165 1.2E-53 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 M634_06140 7d0d1d5b687414fd5ddc4abb98955b0a 166 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 163 1.2E-62 T 12-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 M634_03890 8ca1364aa170819b5e61a33e9d63d29a 64 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 5 55 1.4E-5 T 12-10-2018 IPR010260 DNA-binding transcriptional activator AlpA M634_03890 8ca1364aa170819b5e61a33e9d63d29a 64 SUPERFAMILY SSF46955 6 58 2.01E-5 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily M634_02575 8bd9f5260cd1aa5f5e5cfc08989ff94a 334 Hamap MF_00540 Adenosine deaminase [add]. 1 331 54.901 T 12-10-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 M634_02575 8bd9f5260cd1aa5f5e5cfc08989ff94a 334 SUPERFAMILY SSF51556 3 325 1.48E-75 T 12-10-2018 IPR032466 Metal-dependent hydrolase M634_02575 8bd9f5260cd1aa5f5e5cfc08989ff94a 334 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 330 9.9E-123 T 12-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 M634_02575 8bd9f5260cd1aa5f5e5cfc08989ff94a 334 Gene3D G3DSA:3.20.20.140 1 334 2.2E-97 T 12-10-2018 M634_02575 8bd9f5260cd1aa5f5e5cfc08989ff94a 334 Pfam PF00962 Adenosine/AMP deaminase 5 328 1.7E-90 T 12-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 M634_24595 d111ebed515fece37b8349847c611280 230 SMART SM00382 28 196 1.1E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_24595 d111ebed515fece37b8349847c611280 230 SUPERFAMILY SSF52540 3 225 5.65E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_24595 d111ebed515fece37b8349847c611280 230 Pfam PF00005 ABC transporter 19 147 8.5E-16 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_24595 d111ebed515fece37b8349847c611280 230 Gene3D G3DSA:3.40.50.300 1 229 2.2E-50 T 12-10-2018 M634_05325 6e5a30d78b1d4431a0782eeb92a25bfc 369 PIRSF PIRSF001259 3 369 1.4E-130 T 12-10-2018 M634_05325 6e5a30d78b1d4431a0782eeb92a25bfc 369 Gene3D G3DSA:3.90.870.10 1 206 8.7E-90 T 12-10-2018 M634_05325 6e5a30d78b1d4431a0782eeb92a25bfc 369 SUPERFAMILY SSF55821 3 202 1.9E-87 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily M634_05325 6e5a30d78b1d4431a0782eeb92a25bfc 369 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.75 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 M634_05325 6e5a30d78b1d4431a0782eeb92a25bfc 369 Pfam PF00925 GTP cyclohydrolase II 207 367 7.5E-41 T 12-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 M634_05325 6e5a30d78b1d4431a0782eeb92a25bfc 369 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 1.3E-85 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 M634_05325 6e5a30d78b1d4431a0782eeb92a25bfc 369 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 7 199 3.8E-76 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 M634_05325 6e5a30d78b1d4431a0782eeb92a25bfc 369 SUPERFAMILY SSF142695 205 367 1.05E-48 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 M634_16645 d8a71ade2df77cea530122cf5a14f8e4 608 SMART SM00382 386 577 1.5E-19 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_16645 d8a71ade2df77cea530122cf5a14f8e4 608 SUPERFAMILY SSF90123 30 333 6.15E-47 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M634_16645 d8a71ade2df77cea530122cf5a14f8e4 608 Gene3D G3DSA:3.40.50.300 351 604 2.1E-92 T 12-10-2018 M634_16645 d8a71ade2df77cea530122cf5a14f8e4 608 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_16645 d8a71ade2df77cea530122cf5a14f8e4 608 Pfam PF00664 ABC transporter transmembrane region 40 308 1.2E-16 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 M634_16645 d8a71ade2df77cea530122cf5a14f8e4 608 Gene3D G3DSA:1.20.1560.10 6 335 3.7E-24 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M634_16645 d8a71ade2df77cea530122cf5a14f8e4 608 Pfam PF00005 ABC transporter 378 531 9.3E-37 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_16645 d8a71ade2df77cea530122cf5a14f8e4 608 SUPERFAMILY SSF52540 351 601 8.25E-90 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_03940 f9092b9782179862f0b1e2c023e9aa31 586 Pfam PF08278 DNA primase DnaG DnaB-binding 457 580 6.4E-37 T 12-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 M634_03940 f9092b9782179862f0b1e2c023e9aa31 586 SUPERFAMILY SSF117023 453 584 6.41E-45 T 12-10-2018 M634_03940 f9092b9782179862f0b1e2c023e9aa31 586 SMART SM00766 456 581 2.8E-58 T 12-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 M634_03940 f9092b9782179862f0b1e2c023e9aa31 586 Gene3D G3DSA:1.10.860.10 444 586 7.5E-59 T 12-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal M634_03940 f9092b9782179862f0b1e2c023e9aa31 586 Pfam PF08275 DNA primase catalytic core, N-terminal domain 133 257 2.9E-41 T 12-10-2018 IPR013264 DNA primase, catalytic core, N-terminal M634_03940 f9092b9782179862f0b1e2c023e9aa31 586 Hamap MF_00974 DNA primase [dnaG]. 4 582 29.086 T 12-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 M634_03940 f9092b9782179862f0b1e2c023e9aa31 586 Pfam PF01807 CHC2 zinc finger 6 101 2.5E-41 T 12-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 M634_03940 f9092b9782179862f0b1e2c023e9aa31 586 SUPERFAMILY SSF57783 4 101 4.76E-38 T 12-10-2018 M634_03940 f9092b9782179862f0b1e2c023e9aa31 586 Pfam PF10410 DnaB-helicase binding domain of primase 377 431 8.2E-8 T 12-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 M634_03940 f9092b9782179862f0b1e2c023e9aa31 586 PIRSF PIRSF002811 2 585 2.2E-143 T 12-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 M634_03940 f9092b9782179862f0b1e2c023e9aa31 586 Pfam PF13155 Toprim-like 270 356 3.0E-13 T 12-10-2018 M634_03940 f9092b9782179862f0b1e2c023e9aa31 586 Gene3D G3DSA:3.90.980.10 122 247 2.9E-45 T 12-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily M634_03940 f9092b9782179862f0b1e2c023e9aa31 586 Gene3D G3DSA:3.40.1360.10 248 374 2.1E-42 T 12-10-2018 M634_03940 f9092b9782179862f0b1e2c023e9aa31 586 TIGRFAM TIGR01391 dnaG: DNA primase 5 425 4.0E-146 T 12-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 M634_03940 f9092b9782179862f0b1e2c023e9aa31 586 SMART SM00493 266 337 1.4E-17 T 12-10-2018 IPR006171 TOPRIM domain M634_03940 f9092b9782179862f0b1e2c023e9aa31 586 SMART SM00400 36 90 2.1E-36 T 12-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 M634_03940 f9092b9782179862f0b1e2c023e9aa31 586 Gene3D G3DSA:3.90.580.10 1 102 1.0E-39 T 12-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 M634_03940 f9092b9782179862f0b1e2c023e9aa31 586 Gene3D G3DSA:1.20.50.20 375 433 3.1E-8 T 12-10-2018 M634_03940 f9092b9782179862f0b1e2c023e9aa31 586 SUPERFAMILY SSF56731 122 431 1.05E-109 T 12-10-2018 M634_14715 d1c240a0bd100f40181aa821e80926d3 152 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 1 149 3.2E-53 T 12-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 M634_14715 d1c240a0bd100f40181aa821e80926d3 152 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 115 131 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 M634_14715 d1c240a0bd100f40181aa821e80926d3 152 Gene3D G3DSA:1.10.287.180 1 69 1.1E-22 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 M634_14715 d1c240a0bd100f40181aa821e80926d3 152 PIRSF PIRSF006092 1 152 3.3E-46 T 12-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 M634_14715 d1c240a0bd100f40181aa821e80926d3 152 Gene3D G3DSA:3.10.50.30 70 152 3.0E-31 T 12-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 M634_14715 d1c240a0bd100f40181aa821e80926d3 152 Pfam PF03449 Transcription elongation factor, N-terminal 1 68 1.1E-22 T 12-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 M634_14715 d1c240a0bd100f40181aa821e80926d3 152 SUPERFAMILY SSF54534 76 151 1.7E-24 T 12-10-2018 M634_14715 d1c240a0bd100f40181aa821e80926d3 152 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 77 151 6.4E-28 T 12-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 M634_14715 d1c240a0bd100f40181aa821e80926d3 152 SUPERFAMILY SSF46557 1 70 4.58E-23 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 M634_14715 d1c240a0bd100f40181aa821e80926d3 152 Hamap MF_00105 Transcription elongation factor GreA [greA]. 1 150 30.833 T 12-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 M634_14715 d1c240a0bd100f40181aa821e80926d3 152 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 12 42 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 M634_07335 86a21a5f470ca8c5c100ce8abc216848 806 SMART SM00387 464 579 2.0E-39 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_07335 86a21a5f470ca8c5c100ce8abc216848 806 Pfam PF00072 Response regulator receiver domain 601 712 6.6E-18 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_07335 86a21a5f470ca8c5c100ce8abc216848 806 Gene3D G3DSA:3.30.565.10 416 579 1.3E-46 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_07335 86a21a5f470ca8c5c100ce8abc216848 806 SMART SM00388 352 417 8.2E-24 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_07335 86a21a5f470ca8c5c100ce8abc216848 806 Gene3D G3DSA:3.30.450.20 30 204 1.4E-22 T 12-10-2018 M634_07335 86a21a5f470ca8c5c100ce8abc216848 806 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 464 575 6.3E-31 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_07335 86a21a5f470ca8c5c100ce8abc216848 806 Gene3D G3DSA:3.40.50.2300 586 717 2.4E-30 T 12-10-2018 M634_07335 86a21a5f470ca8c5c100ce8abc216848 806 SUPERFAMILY SSF47384 338 418 4.51E-19 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M634_07335 86a21a5f470ca8c5c100ce8abc216848 806 SUPERFAMILY SSF55874 406 575 1.96E-42 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_07335 86a21a5f470ca8c5c100ce8abc216848 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 518 2.0E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_07335 86a21a5f470ca8c5c100ce8abc216848 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 532 2.0E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_07335 86a21a5f470ca8c5c100ce8abc216848 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 539 557 2.0E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_07335 86a21a5f470ca8c5c100ce8abc216848 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 563 576 2.0E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_07335 86a21a5f470ca8c5c100ce8abc216848 806 Gene3D G3DSA:1.10.287.130 321 415 1.4E-25 T 12-10-2018 M634_07335 86a21a5f470ca8c5c100ce8abc216848 806 SUPERFAMILY SSF52172 596 729 1.32E-27 T 12-10-2018 IPR011006 CheY-like superfamily M634_07335 86a21a5f470ca8c5c100ce8abc216848 806 SMART SM00448 598 712 2.1E-20 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_07335 86a21a5f470ca8c5c100ce8abc216848 806 Pfam PF02743 Cache domain 44 228 2.4E-12 T 12-10-2018 IPR033479 Double Cache domain 1 M634_07335 86a21a5f470ca8c5c100ce8abc216848 806 Pfam PF00512 His Kinase A (phospho-acceptor) domain 353 417 6.2E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_01950 b0157d2d599402fbefc668a077f98f83 258 SUPERFAMILY SSF53850 1 256 2.44E-50 T 12-10-2018 M634_01950 b0157d2d599402fbefc668a077f98f83 258 Gene3D G3DSA:3.40.190.10 25 244 3.0E-63 T 12-10-2018 M634_01950 b0157d2d599402fbefc668a077f98f83 258 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 57 70 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site M634_01950 b0157d2d599402fbefc668a077f98f83 258 SMART SM00062 33 257 2.3E-38 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M634_01950 b0157d2d599402fbefc668a077f98f83 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 254 3.0E-37 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M634_01950 b0157d2d599402fbefc668a077f98f83 258 Gene3D G3DSA:3.40.190.10 120 211 3.0E-63 T 12-10-2018 M634_09600 ef560a6ea607a463d9fa859b4c35eb82 158 Pfam PF05751 FixH 7 147 2.2E-39 T 12-10-2018 IPR008620 Nitrogen fixation protein FixH M634_05190 e6230cf9c56c805cff3c435fda177dba 381 SUPERFAMILY SSF49493 115 265 1.05E-19 T 12-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 M634_05190 e6230cf9c56c805cff3c435fda177dba 381 Gene3D G3DSA:2.60.260.20 257 365 8.3E-29 T 12-10-2018 M634_05190 e6230cf9c56c805cff3c435fda177dba 381 Gene3D G3DSA:1.10.287.110 1 116 2.2E-36 T 12-10-2018 IPR036869 Chaperone J-domain superfamily M634_05190 e6230cf9c56c805cff3c435fda177dba 381 SUPERFAMILY SSF46565 1 113 5.23E-36 T 12-10-2018 IPR036869 Chaperone J-domain superfamily M634_05190 e6230cf9c56c805cff3c435fda177dba 381 SMART SM00271 4 62 5.4E-31 T 12-10-2018 IPR001623 DnaJ domain M634_05190 e6230cf9c56c805cff3c435fda177dba 381 PRINTS PR00625 DnaJ domain signature 25 40 3.7E-32 T 12-10-2018 IPR001623 DnaJ domain M634_05190 e6230cf9c56c805cff3c435fda177dba 381 PRINTS PR00625 DnaJ domain signature 62 81 3.7E-32 T 12-10-2018 IPR001623 DnaJ domain M634_05190 e6230cf9c56c805cff3c435fda177dba 381 PRINTS PR00625 DnaJ domain signature 7 25 3.7E-32 T 12-10-2018 IPR001623 DnaJ domain M634_05190 e6230cf9c56c805cff3c435fda177dba 381 PRINTS PR00625 DnaJ domain signature 42 62 3.7E-32 T 12-10-2018 IPR001623 DnaJ domain M634_05190 e6230cf9c56c805cff3c435fda177dba 381 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 375 42.922 T 12-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 M634_05190 e6230cf9c56c805cff3c435fda177dba 381 Pfam PF01556 DnaJ C terminal domain 123 335 1.2E-45 T 12-10-2018 IPR002939 Chaperone DnaJ, C-terminal M634_05190 e6230cf9c56c805cff3c435fda177dba 381 SUPERFAMILY SSF49493 261 346 7.85E-23 T 12-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 M634_05190 e6230cf9c56c805cff3c435fda177dba 381 Pfam PF00684 DnaJ central domain 149 209 4.3E-15 T 12-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 M634_05190 e6230cf9c56c805cff3c435fda177dba 381 SUPERFAMILY SSF57938 136 212 3.01E-23 T 12-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily M634_05190 e6230cf9c56c805cff3c435fda177dba 381 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 12-10-2018 IPR018253 DnaJ domain, conserved site M634_05190 e6230cf9c56c805cff3c435fda177dba 381 Gene3D G3DSA:2.10.230.10 141 211 1.8E-25 T 12-10-2018 M634_05190 e6230cf9c56c805cff3c435fda177dba 381 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 351 1.1E-140 T 12-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 M634_05190 e6230cf9c56c805cff3c435fda177dba 381 Pfam PF00226 DnaJ domain 5 67 6.7E-27 T 12-10-2018 IPR001623 DnaJ domain M634_21720 3c631513f1a6cd3b1d061bafc49e309d 104 SUPERFAMILY SSF103481 6 102 6.02E-18 T 12-10-2018 M634_21720 3c631513f1a6cd3b1d061bafc49e309d 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 6.9E-26 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 M634_21720 3c631513f1a6cd3b1d061bafc49e309d 104 Gene3D G3DSA:1.10.3730.20 1 104 4.1E-30 T 12-10-2018 M634_03050 b1354a73c86f0c8c8018d5ffc9fe5aeb 423 Pfam PF00534 Glycosyl transferases group 1 247 400 5.1E-8 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 M634_03050 b1354a73c86f0c8c8018d5ffc9fe5aeb 423 Gene3D G3DSA:3.40.50.2000 215 406 3.1E-63 T 12-10-2018 M634_03050 b1354a73c86f0c8c8018d5ffc9fe5aeb 423 Gene3D G3DSA:3.40.50.11720 34 210 8.0E-49 T 12-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 M634_03050 b1354a73c86f0c8c8018d5ffc9fe5aeb 423 SUPERFAMILY SSF53756 53 409 1.07E-17 T 12-10-2018 M634_03050 b1354a73c86f0c8c8018d5ffc9fe5aeb 423 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 35 212 2.0E-62 T 12-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 M634_13945 59aed90578459bb661825b826ad1e010 804 Pfam PF01103 Surface antigen 448 804 1.3E-90 T 12-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 M634_13945 59aed90578459bb661825b826ad1e010 804 Pfam PF07244 Surface antigen variable number repeat 92 172 8.2E-12 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 M634_13945 59aed90578459bb661825b826ad1e010 804 Pfam PF07244 Surface antigen variable number repeat 266 344 8.8E-10 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 M634_13945 59aed90578459bb661825b826ad1e010 804 Pfam PF07244 Surface antigen variable number repeat 347 420 4.1E-16 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 M634_13945 59aed90578459bb661825b826ad1e010 804 Pfam PF07244 Surface antigen variable number repeat 176 263 4.5E-15 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 M634_13945 59aed90578459bb661825b826ad1e010 804 Gene3D G3DSA:3.10.20.310 175 263 3.9E-22 T 12-10-2018 M634_13945 59aed90578459bb661825b826ad1e010 804 Gene3D G3DSA:3.10.20.310 92 174 2.6E-17 T 12-10-2018 M634_13945 59aed90578459bb661825b826ad1e010 804 Gene3D G3DSA:3.10.20.310 18 91 1.2E-19 T 12-10-2018 M634_13945 59aed90578459bb661825b826ad1e010 804 PIRSF PIRSF006076 1 804 1.5E-244 T 12-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 M634_13945 59aed90578459bb661825b826ad1e010 804 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 804 25.829 T 12-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 M634_13945 59aed90578459bb661825b826ad1e010 804 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 804 2.3E-277 T 12-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 M634_13945 59aed90578459bb661825b826ad1e010 804 Gene3D G3DSA:3.10.20.310 264 346 2.9E-14 T 12-10-2018 M634_13945 59aed90578459bb661825b826ad1e010 804 Gene3D G3DSA:2.40.160.50 425 804 3.7E-121 T 12-10-2018 M634_13945 59aed90578459bb661825b826ad1e010 804 Gene3D G3DSA:3.10.20.310 347 424 2.1E-25 T 12-10-2018 M634_17940 6b71d01c75e23bfa246f55af213c070c 230 Pfam PF03475 3-alpha domain 173 215 8.8E-10 T 12-10-2018 IPR005163 3-alpha domain M634_17940 6b71d01c75e23bfa246f55af213c070c 230 Gene3D G3DSA:2.40.33.20 1 230 6.0E-69 T 12-10-2018 M634_17940 6b71d01c75e23bfa246f55af213c070c 230 SUPERFAMILY SSF50800 3 227 7.85E-71 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily M634_17940 6b71d01c75e23bfa246f55af213c070c 230 Pfam PF03473 MOSC domain 49 163 2.0E-22 T 12-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 M634_07770 34ef7989a5223a930d556f4a67acbdbc 539 SUPERFAMILY SSF53850 35 535 7.6E-132 T 12-10-2018 M634_07770 34ef7989a5223a930d556f4a67acbdbc 539 Gene3D G3DSA:3.40.190.10 217 526 3.9E-143 T 12-10-2018 M634_07770 34ef7989a5223a930d556f4a67acbdbc 539 Gene3D G3DSA:3.90.76.10 44 216 3.9E-143 T 12-10-2018 M634_07770 34ef7989a5223a930d556f4a67acbdbc 539 PIRSF PIRSF002741 4 538 4.4E-92 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 M634_07770 34ef7989a5223a930d556f4a67acbdbc 539 Gene3D G3DSA:3.10.105.10 296 514 3.9E-143 T 12-10-2018 M634_07770 34ef7989a5223a930d556f4a67acbdbc 539 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 455 1.2E-85 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain M634_20700 59ac799972f1a89ee29d0dafadbcde84 703 SUPERFAMILY SSF101898 43 227 3.66E-11 T 12-10-2018 M634_20700 59ac799972f1a89ee29d0dafadbcde84 703 Gene3D G3DSA:2.120.10.30 83 256 5.7E-6 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like M634_20700 59ac799972f1a89ee29d0dafadbcde84 703 TIGRFAM TIGR04456 LruC_dom: LruC domain 442 692 2.9E-84 T 12-10-2018 IPR031025 LruC domain M634_20700 59ac799972f1a89ee29d0dafadbcde84 703 Pfam PF16130 Domain of unknown function (DUF4842) 476 692 4.8E-60 T 12-10-2018 IPR032295 Domain of unknown function DUF4842 M634_18840 498746af2a16b1d488c47c92b67122ab 457 SUPERFAMILY SSF55874 287 455 1.44E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_18840 498746af2a16b1d488c47c92b67122ab 457 SUPERFAMILY SSF158472 178 228 1.96E-5 T 12-10-2018 M634_18840 498746af2a16b1d488c47c92b67122ab 457 SUPERFAMILY SSF47384 217 297 6.08E-13 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M634_18840 498746af2a16b1d488c47c92b67122ab 457 Gene3D G3DSA:3.30.565.10 314 457 3.8E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_18840 498746af2a16b1d488c47c92b67122ab 457 SMART SM00388 234 298 3.6E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_18840 498746af2a16b1d488c47c92b67122ab 457 Pfam PF16750 Sensor domain of 2-component histidine kinase 49 149 1.1E-30 T 12-10-2018 IPR031930 2-component histidine kinase, sensor domain M634_18840 498746af2a16b1d488c47c92b67122ab 457 SMART SM00387 343 457 3.2E-26 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_18840 498746af2a16b1d488c47c92b67122ab 457 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 297 1.5E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_18840 498746af2a16b1d488c47c92b67122ab 457 SMART SM00304 178 233 1.7E-5 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_18840 498746af2a16b1d488c47c92b67122ab 457 Gene3D G3DSA:3.30.450.170 40 150 7.8E-9 T 12-10-2018 IPR038428 2-component histidine kinase, sensor domain superfamily M634_18840 498746af2a16b1d488c47c92b67122ab 457 Gene3D G3DSA:1.10.287.130 182 299 2.6E-24 T 12-10-2018 M634_18840 498746af2a16b1d488c47c92b67122ab 457 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 349 455 5.3E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_18840 498746af2a16b1d488c47c92b67122ab 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 412 2.1E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_18840 498746af2a16b1d488c47c92b67122ab 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 2.1E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_18840 498746af2a16b1d488c47c92b67122ab 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 398 2.1E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_08585 fa919d4453df26e3f7a3d3418995c98f 373 Pfam PF08402 TOBE domain 283 361 8.8E-16 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 M634_08585 fa919d4453df26e3f7a3d3418995c98f 373 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 40 358 2.4E-117 T 12-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 M634_08585 fa919d4453df26e3f7a3d3418995c98f 373 SMART SM00382 34 217 1.7E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_08585 fa919d4453df26e3f7a3d3418995c98f 373 Gene3D G3DSA:2.40.50.140 245 285 9.2E-8 T 12-10-2018 M634_08585 fa919d4453df26e3f7a3d3418995c98f 373 Gene3D G3DSA:3.40.50.300 2 244 2.1E-77 T 12-10-2018 M634_08585 fa919d4453df26e3f7a3d3418995c98f 373 Gene3D G3DSA:2.40.50.100 286 347 9.2E-8 T 12-10-2018 M634_08585 fa919d4453df26e3f7a3d3418995c98f 373 SUPERFAMILY SSF52540 9 246 4.78E-87 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_08585 fa919d4453df26e3f7a3d3418995c98f 373 Pfam PF00005 ABC transporter 26 167 8.2E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_08585 fa919d4453df26e3f7a3d3418995c98f 373 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_08585 fa919d4453df26e3f7a3d3418995c98f 373 SUPERFAMILY SSF50331 242 361 9.14E-19 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal M634_07255 48a583f1af061715b758f91bc274b979 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 4.9E-172 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 M634_07255 48a583f1af061715b758f91bc274b979 378 PIRSF PIRSF000267 2 377 2.2E-123 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 M634_07255 48a583f1af061715b758f91bc274b979 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 361 1.7E-108 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 M634_12640 b77996b6fe3ac94dc72ceda7c02148fe 300 Gene3D G3DSA:1.10.3720.10 96 296 8.5E-20 T 12-10-2018 IPR035906 MetI-like superfamily M634_12640 b77996b6fe3ac94dc72ceda7c02148fe 300 SUPERFAMILY SSF161098 97 281 1.44E-26 T 12-10-2018 IPR035906 MetI-like superfamily M634_12640 b77996b6fe3ac94dc72ceda7c02148fe 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 298 3.1E-27 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_12640 b77996b6fe3ac94dc72ceda7c02148fe 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 69 5.3E-15 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain M634_21700 b4c342248ad593aa20f70972a75818d1 128 SUPERFAMILY SSF161084 2 125 3.79E-30 T 12-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily M634_21700 b4c342248ad593aa20f70972a75818d1 128 Pfam PF01124 MAPEG family 3 119 6.3E-25 T 12-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein M634_21700 b4c342248ad593aa20f70972a75818d1 128 Gene3D G3DSA:1.20.120.550 1 124 1.0E-27 T 12-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily M634_07485 a19e81fd33dc0acb73ca06c6662e94c9 426 SUPERFAMILY SSF53383 4 420 1.93E-135 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_07485 a19e81fd33dc0acb73ca06c6662e94c9 426 Gene3D G3DSA:3.40.640.10 58 327 7.0E-169 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_07485 a19e81fd33dc0acb73ca06c6662e94c9 426 PIRSF PIRSF000521 22 421 1.1E-35 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M634_07485 a19e81fd33dc0acb73ca06c6662e94c9 426 Gene3D G3DSA:3.90.1150.10 8 412 7.0E-169 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M634_07485 a19e81fd33dc0acb73ca06c6662e94c9 426 Pfam PF00202 Aminotransferase class-III 24 418 2.8E-128 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M634_07485 a19e81fd33dc0acb73ca06c6662e94c9 426 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 10 418 7.0E-178 T 12-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 M634_07485 a19e81fd33dc0acb73ca06c6662e94c9 426 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 421 48.924 T 12-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 M634_07485 a19e81fd33dc0acb73ca06c6662e94c9 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 239 276 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M634_07380 0946371f22b5a77b2e00fd2ec4511be8 1053 SUPERFAMILY SSF82714 722 809 9.42E-23 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_07380 0946371f22b5a77b2e00fd2ec4511be8 1053 SUPERFAMILY SSF82693 135 330 7.59E-24 T 12-10-2018 M634_07380 0946371f22b5a77b2e00fd2ec4511be8 1053 Gene3D G3DSA:1.20.1640.10 513 1022 0.0 T 12-10-2018 M634_07380 0946371f22b5a77b2e00fd2ec4511be8 1053 SUPERFAMILY SSF82693 672 856 2.88E-26 T 12-10-2018 M634_07380 0946371f22b5a77b2e00fd2ec4511be8 1053 Gene3D G3DSA:3.30.70.1430 38 817 0.0 T 12-10-2018 M634_07380 0946371f22b5a77b2e00fd2ec4511be8 1053 Gene3D G3DSA:3.30.2090.10 179 275 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_07380 0946371f22b5a77b2e00fd2ec4511be8 1053 SUPERFAMILY SSF82693 38 131 1.94E-24 T 12-10-2018 M634_07380 0946371f22b5a77b2e00fd2ec4511be8 1053 Gene3D G3DSA:3.30.70.1430 567 668 0.0 T 12-10-2018 M634_07380 0946371f22b5a77b2e00fd2ec4511be8 1053 Pfam PF00873 AcrB/AcrD/AcrF family 1 1025 0.0 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_07380 0946371f22b5a77b2e00fd2ec4511be8 1053 Gene3D G3DSA:1.20.1640.10 8 512 0.0 T 12-10-2018 M634_07380 0946371f22b5a77b2e00fd2ec4511be8 1053 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.6E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_07380 0946371f22b5a77b2e00fd2ec4511be8 1053 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 2.6E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_07380 0946371f22b5a77b2e00fd2ec4511be8 1053 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.6E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_07380 0946371f22b5a77b2e00fd2ec4511be8 1053 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.6E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_07380 0946371f22b5a77b2e00fd2ec4511be8 1053 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 2.6E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_07380 0946371f22b5a77b2e00fd2ec4511be8 1053 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.6E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_07380 0946371f22b5a77b2e00fd2ec4511be8 1053 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 2.6E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_07380 0946371f22b5a77b2e00fd2ec4511be8 1053 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 2.6E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_07380 0946371f22b5a77b2e00fd2ec4511be8 1053 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 2.6E-108 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_07380 0946371f22b5a77b2e00fd2ec4511be8 1053 SUPERFAMILY SSF82714 182 272 1.28E-19 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_07380 0946371f22b5a77b2e00fd2ec4511be8 1053 SUPERFAMILY SSF82693 565 670 1.57E-31 T 12-10-2018 M634_07380 0946371f22b5a77b2e00fd2ec4511be8 1053 SUPERFAMILY SSF82866 831 1026 2.49E-41 T 12-10-2018 M634_07380 0946371f22b5a77b2e00fd2ec4511be8 1053 SUPERFAMILY SSF82866 296 497 1.44E-48 T 12-10-2018 M634_07380 0946371f22b5a77b2e00fd2ec4511be8 1053 Gene3D G3DSA:3.30.2090.10 721 809 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_07380 0946371f22b5a77b2e00fd2ec4511be8 1053 Gene3D G3DSA:3.30.70.1320 133 332 0.0 T 12-10-2018 M634_07380 0946371f22b5a77b2e00fd2ec4511be8 1053 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1042 0.0 T 12-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 M634_07380 0946371f22b5a77b2e00fd2ec4511be8 1053 Gene3D G3DSA:3.30.70.1440 669 865 0.0 T 12-10-2018 M634_07495 7e7faec5501b35bd9881b45b6806790f 383 Gene3D G3DSA:3.40.640.10 58 283 9.0E-122 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_07495 7e7faec5501b35bd9881b45b6806790f 383 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 22 376 3.9E-135 T 12-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 M634_07495 7e7faec5501b35bd9881b45b6806790f 383 Gene3D G3DSA:3.90.1150.10 42 372 9.0E-122 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M634_07495 7e7faec5501b35bd9881b45b6806790f 383 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 232 241 - T 12-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 M634_07495 7e7faec5501b35bd9881b45b6806790f 383 SUPERFAMILY SSF53383 4 379 1.58E-98 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_07495 7e7faec5501b35bd9881b45b6806790f 383 Pfam PF00155 Aminotransferase class I and II 42 372 5.0E-51 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 M634_07495 7e7faec5501b35bd9881b45b6806790f 383 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 4 380 45.766 T 12-10-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 M634_10310 60883b67336d69068c1015957a5273fa 181 SMART SM01118 10 181 2.5E-16 T 12-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 M634_10310 60883b67336d69068c1015957a5273fa 181 ProDom PD009560 CYCLASE ADENYLATE CYCLASE ADENYLYL CYAB LYASE CLASS CYAB-TYPE THERMOPHILIC MJ0240 11 139 9.0E-8 T 12-10-2018 M634_10310 60883b67336d69068c1015957a5273fa 181 Pfam PF01928 CYTH domain 11 175 9.3E-19 T 12-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 M634_10310 60883b67336d69068c1015957a5273fa 181 TIGRFAM TIGR00318 cyaB: putative adenylyl cyclase CyaB 11 180 1.3E-17 T 12-10-2018 IPR008173 Adenylyl cyclase CyaB KEGG: 00230+4.6.1.1 M634_10310 60883b67336d69068c1015957a5273fa 181 Gene3D G3DSA:2.40.320.10 1 181 2.4E-51 T 12-10-2018 M634_10310 60883b67336d69068c1015957a5273fa 181 SUPERFAMILY SSF55154 11 179 5.07E-39 T 12-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 M634_15525 876aec4ae982d38ccdd48681c1726b0a 392 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 378 2.0E-136 T 12-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 M634_15525 876aec4ae982d38ccdd48681c1726b0a 392 Pfam PF06969 HemN C-terminal domain 314 374 1.0E-8 T 12-10-2018 IPR010723 HemN, C-terminal M634_15525 876aec4ae982d38ccdd48681c1726b0a 392 SMART SM00729 6 227 2.0E-54 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 M634_15525 876aec4ae982d38ccdd48681c1726b0a 392 Gene3D G3DSA:3.80.30.20 2 308 9.2E-97 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe M634_15525 876aec4ae982d38ccdd48681c1726b0a 392 SUPERFAMILY SSF102114 4 386 1.57E-111 T 12-10-2018 M634_15525 876aec4ae982d38ccdd48681c1726b0a 392 Pfam PF04055 Radical SAM superfamily 11 181 2.3E-18 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 M634_01675 1619725ad7aaadbe0df55de32b468e3e 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 9 120 2.9E-23 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 M634_01675 1619725ad7aaadbe0df55de32b468e3e 127 TIGRFAM TIGR00494 crcB: protein CrcB 10 123 1.1E-29 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 M634_01675 1619725ad7aaadbe0df55de32b468e3e 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 7 125 18.955 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 M634_17205 3b429952d2c6a7ca9475bac69132e3a0 128 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 123 1.5E-22 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 M634_17205 3b429952d2c6a7ca9475bac69132e3a0 128 Pfam PF02561 Flagellar protein FliS 7 122 1.3E-32 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 M634_17205 3b429952d2c6a7ca9475bac69132e3a0 128 PIRSF PIRSF039090 1 128 6.9E-40 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 M634_17205 3b429952d2c6a7ca9475bac69132e3a0 128 Gene3D G3DSA:1.20.120.340 1 127 1.0E-35 T 12-10-2018 M634_17205 3b429952d2c6a7ca9475bac69132e3a0 128 SUPERFAMILY SSF101116 9 126 1.57E-34 T 12-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 M634_18610 418787adb0c1e6b29945e9dce46f701a 109 Pfam PF13642 protein structure with unknown function 8 107 8.8E-33 T 12-10-2018 IPR025284 Protein of unknown function DUF4144 M634_18610 418787adb0c1e6b29945e9dce46f701a 109 Gene3D G3DSA:2.40.10.320 2 63 3.8E-5 T 12-10-2018 M634_17125 61052bdbe969a3816cd448be31b7bd10 339 Gene3D G3DSA:1.10.220.30 6 91 1.6E-17 T 12-10-2018 M634_17125 61052bdbe969a3816cd448be31b7bd10 339 Pfam PF14842 FliG N-terminal domain 12 109 1.2E-22 T 12-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain M634_17125 61052bdbe969a3816cd448be31b7bd10 339 SUPERFAMILY SSF48029 122 330 1.44E-53 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical M634_17125 61052bdbe969a3816cd448be31b7bd10 339 SUPERFAMILY SSF48029 13 114 1.7E-17 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical M634_17125 61052bdbe969a3816cd448be31b7bd10 339 Gene3D G3DSA:1.10.220.30 96 199 8.0E-23 T 12-10-2018 M634_17125 61052bdbe969a3816cd448be31b7bd10 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 12 28 5.6E-28 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 M634_17125 61052bdbe969a3816cd448be31b7bd10 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 121 144 5.6E-28 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 M634_17125 61052bdbe969a3816cd448be31b7bd10 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 254 274 5.6E-28 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 M634_17125 61052bdbe969a3816cd448be31b7bd10 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 278 304 5.6E-28 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 M634_17125 61052bdbe969a3816cd448be31b7bd10 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 232 252 5.6E-28 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 M634_17125 61052bdbe969a3816cd448be31b7bd10 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 41 67 5.6E-28 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 M634_17125 61052bdbe969a3816cd448be31b7bd10 339 Pfam PF01706 FliG C-terminal domain 224 330 1.5E-24 T 12-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal M634_17125 61052bdbe969a3816cd448be31b7bd10 339 Gene3D G3DSA:1.10.220.30 202 335 8.4E-25 T 12-10-2018 M634_17125 61052bdbe969a3816cd448be31b7bd10 339 Pfam PF14841 FliG middle domain 123 196 2.4E-20 T 12-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain M634_03990 a9dfdb7e3019fa620235aa147fcd7e6e 539 SMART SM00382 42 195 1.7E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_03990 a9dfdb7e3019fa620235aa147fcd7e6e 539 Pfam PF01471 Putative peptidoglycan binding domain 465 520 3.1E-7 T 12-10-2018 IPR002477 Peptidoglycan binding-like M634_03990 a9dfdb7e3019fa620235aa147fcd7e6e 539 SUPERFAMILY SSF47090 455 527 6.8E-12 T 12-10-2018 IPR036365 PGBD-like superfamily M634_03990 a9dfdb7e3019fa620235aa147fcd7e6e 539 SUPERFAMILY SSF52540 6 264 1.33E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_03990 a9dfdb7e3019fa620235aa147fcd7e6e 539 Pfam PF13401 AAA domain 42 171 8.2E-23 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_03990 a9dfdb7e3019fa620235aa147fcd7e6e 539 Gene3D G3DSA:3.90.70.10 342 457 3.5E-32 T 12-10-2018 M634_03990 a9dfdb7e3019fa620235aa147fcd7e6e 539 Gene3D G3DSA:1.10.101.10 458 525 4.9E-22 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 M634_03990 a9dfdb7e3019fa620235aa147fcd7e6e 539 Gene3D G3DSA:3.40.50.300 25 184 2.8E-14 T 12-10-2018 M634_20005 78eac2c0e846b7e551a68aa684fd4034 354 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 110 120 - T 12-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 M634_20005 78eac2c0e846b7e551a68aa684fd4034 354 Gene3D G3DSA:3.40.50.40 241 354 9.9E-42 T 12-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 M634_20005 78eac2c0e846b7e551a68aa684fd4034 354 PRINTS PR00139 Asparaginase/glutaminase family signature 30 41 1.3E-23 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 M634_20005 78eac2c0e846b7e551a68aa684fd4034 354 PRINTS PR00139 Asparaginase/glutaminase family signature 288 306 1.3E-23 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 M634_20005 78eac2c0e846b7e551a68aa684fd4034 354 PRINTS PR00139 Asparaginase/glutaminase family signature 109 127 1.3E-23 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 M634_20005 78eac2c0e846b7e551a68aa684fd4034 354 PIRSF PIRSF500176 26 354 3.5E-83 T 12-10-2018 M634_20005 78eac2c0e846b7e551a68aa684fd4034 354 SUPERFAMILY SSF53774 27 352 7.85E-110 T 12-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 M634_20005 78eac2c0e846b7e551a68aa684fd4034 354 SMART SM00870 29 348 4.7E-152 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 M634_20005 78eac2c0e846b7e551a68aa684fd4034 354 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 15 354 1.3E-162 T 12-10-2018 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 M634_20005 78eac2c0e846b7e551a68aa684fd4034 354 PIRSF PIRSF001220 24 354 1.9E-97 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 M634_20005 78eac2c0e846b7e551a68aa684fd4034 354 Pfam PF00710 Asparaginase, N-terminal 29 222 7.7E-63 T 12-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 M634_20005 78eac2c0e846b7e551a68aa684fd4034 354 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 32 40 - T 12-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 M634_20005 78eac2c0e846b7e551a68aa684fd4034 354 Gene3D G3DSA:3.40.50.1170 25 240 1.9E-87 T 12-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 M634_14625 42aac33f60876176fd58524cf8984104 137 Pfam PF12802 MarR family 30 88 3.0E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M634_14625 42aac33f60876176fd58524cf8984104 137 SUPERFAMILY SSF46785 17 136 8.4E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_14625 42aac33f60876176fd58524cf8984104 137 Gene3D G3DSA:1.10.10.10 2 137 3.9E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_14625 42aac33f60876176fd58524cf8984104 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 5.0E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M634_14625 42aac33f60876176fd58524cf8984104 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 5.0E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M634_14625 42aac33f60876176fd58524cf8984104 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 5.0E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M634_14625 42aac33f60876176fd58524cf8984104 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 5.0E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M634_14625 42aac33f60876176fd58524cf8984104 137 SMART SM00347 23 124 5.7E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M634_12135 6ab4a50bfa4a9a6467307083023234e1 384 SMART SM00369 121 144 11.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype M634_12135 6ab4a50bfa4a9a6467307083023234e1 384 SMART SM00369 30 53 5.5 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype M634_12135 6ab4a50bfa4a9a6467307083023234e1 384 SMART SM00369 9 29 32.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype M634_12135 6ab4a50bfa4a9a6467307083023234e1 384 SMART SM00369 74 98 52.0 T 12-10-2018 IPR003591 Leucine-rich repeat, typical subtype M634_12135 6ab4a50bfa4a9a6467307083023234e1 384 Pfam PF00069 Protein kinase domain 175 337 1.0E-16 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 M634_12135 6ab4a50bfa4a9a6467307083023234e1 384 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 181 208 - T 12-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 M634_12135 6ab4a50bfa4a9a6467307083023234e1 384 SMART SM00220 175 376 5.4E-6 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 M634_12135 6ab4a50bfa4a9a6467307083023234e1 384 Gene3D G3DSA:3.80.10.10 71 175 2.8E-18 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily M634_12135 6ab4a50bfa4a9a6467307083023234e1 384 Gene3D G3DSA:3.80.10.10 2 70 1.5E-15 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily M634_12135 6ab4a50bfa4a9a6467307083023234e1 384 SUPERFAMILY SSF56112 167 339 2.19E-25 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily M634_12135 6ab4a50bfa4a9a6467307083023234e1 384 Gene3D G3DSA:1.10.510.10 176 359 2.9E-20 T 12-10-2018 M634_12135 6ab4a50bfa4a9a6467307083023234e1 384 SUPERFAMILY SSF52075 9 178 5.89E-35 T 12-10-2018 M634_12135 6ab4a50bfa4a9a6467307083023234e1 384 SMART SM00364 30 49 8.3 T 12-10-2018 M634_12135 6ab4a50bfa4a9a6467307083023234e1 384 SMART SM00364 121 140 200.0 T 12-10-2018 M634_12135 6ab4a50bfa4a9a6467307083023234e1 384 SMART SM00364 75 94 11.0 T 12-10-2018 M634_12135 6ab4a50bfa4a9a6467307083023234e1 384 SMART SM00364 7 26 90.0 T 12-10-2018 M634_12135 6ab4a50bfa4a9a6467307083023234e1 384 SMART SM00364 98 117 430.0 T 12-10-2018 M634_12135 6ab4a50bfa4a9a6467307083023234e1 384 Pfam PF13855 Leucine rich repeat 99 156 1.1E-6 T 12-10-2018 IPR001611 Leucine-rich repeat GO:0005515 M634_12135 6ab4a50bfa4a9a6467307083023234e1 384 Pfam PF13855 Leucine rich repeat 9 64 2.2E-6 T 12-10-2018 IPR001611 Leucine-rich repeat GO:0005515 M634_16910 bf34411b7d105ed61c51455b79a3eb4f 91 Pfam PF14542 GCN5-related N-acetyl-transferase 16 88 1.8E-21 T 12-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase M634_16910 bf34411b7d105ed61c51455b79a3eb4f 91 SUPERFAMILY SSF55729 1 90 2.09E-24 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_16910 bf34411b7d105ed61c51455b79a3eb4f 91 Gene3D G3DSA:3.40.630.30 1 91 1.3E-21 T 12-10-2018 M634_17925 6c9fda1b20ff93304e62e3e9a75f6b33 310 Gene3D G3DSA:3.40.190.10 163 274 4.2E-48 T 12-10-2018 M634_17925 6c9fda1b20ff93304e62e3e9a75f6b33 310 Gene3D G3DSA:1.10.10.10 7 93 5.1E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_17925 6c9fda1b20ff93304e62e3e9a75f6b33 310 Pfam PF03466 LysR substrate binding domain 91 304 3.1E-35 T 12-10-2018 IPR005119 LysR, substrate-binding M634_17925 6c9fda1b20ff93304e62e3e9a75f6b33 310 Gene3D G3DSA:3.40.190.10 103 300 4.2E-48 T 12-10-2018 M634_17925 6c9fda1b20ff93304e62e3e9a75f6b33 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 7.0E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_17925 6c9fda1b20ff93304e62e3e9a75f6b33 310 SUPERFAMILY SSF46785 11 113 5.01E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_17925 6c9fda1b20ff93304e62e3e9a75f6b33 310 SUPERFAMILY SSF53850 91 307 1.07E-34 T 12-10-2018 M634_17925 6c9fda1b20ff93304e62e3e9a75f6b33 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.6E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_17925 6c9fda1b20ff93304e62e3e9a75f6b33 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.6E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_17925 6c9fda1b20ff93304e62e3e9a75f6b33 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.6E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_05730 85f6973c8f1a9ae8ddd2ccea487f4a35 285 Pfam PF13847 Methyltransferase domain 117 257 1.1E-18 T 12-10-2018 IPR025714 Methyltransferase domain M634_05730 85f6973c8f1a9ae8ddd2ccea487f4a35 285 Gene3D G3DSA:1.10.8.10 6 90 2.4E-27 T 12-10-2018 M634_05730 85f6973c8f1a9ae8ddd2ccea487f4a35 285 Gene3D G3DSA:3.40.50.150 91 283 1.7E-58 T 12-10-2018 M634_05730 85f6973c8f1a9ae8ddd2ccea487f4a35 285 SUPERFAMILY SSF53335 7 279 5.58E-58 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_05730 85f6973c8f1a9ae8ddd2ccea487f4a35 285 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 6 283 2.4E-80 T 12-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 M634_05730 85f6973c8f1a9ae8ddd2ccea487f4a35 285 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 29 278 5.8E-93 T 12-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 M634_05730 85f6973c8f1a9ae8ddd2ccea487f4a35 285 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 7 282 45.871 T 12-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 M634_05730 85f6973c8f1a9ae8ddd2ccea487f4a35 285 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 187 193 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 M634_09635 78d6fd8600afb7309132ec6fd92248ca 219 Pfam PF11205 Protein of unknown function (DUF2987) 21 165 7.9E-53 T 12-10-2018 IPR021370 Protein of unknown function DUF2987 M634_14640 b089093ee1dd8ac912ad623eda7dd280 89 Gene3D G3DSA:1.10.287.10 2 89 1.8E-35 T 12-10-2018 M634_14640 b089093ee1dd8ac912ad623eda7dd280 89 SMART SM01387 8 88 7.7E-53 T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_14640 b089093ee1dd8ac912ad623eda7dd280 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_14640 b089093ee1dd8ac912ad623eda7dd280 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.754 T 12-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_14640 b089093ee1dd8ac912ad623eda7dd280 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 4.2E-39 T 12-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_14640 b089093ee1dd8ac912ad623eda7dd280 89 SUPERFAMILY SSF47060 3 89 6.47E-35 T 12-10-2018 IPR009068 S15/NS1, RNA-binding M634_14640 b089093ee1dd8ac912ad623eda7dd280 89 Pfam PF00312 Ribosomal protein S15 8 88 1.1E-36 T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_14640 b089093ee1dd8ac912ad623eda7dd280 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 1.0E-30 T 12-10-2018 M634_21980 6c43f8c29d665e9fa77ec1a2676a8a5c 126 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 125 3.9E-51 T 12-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 M634_21980 6c43f8c29d665e9fa77ec1a2676a8a5c 126 Pfam PF01597 Glycine cleavage H-protein 5 125 7.5E-50 T 12-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate M634_21980 6c43f8c29d665e9fa77ec1a2676a8a5c 126 SUPERFAMILY SSF51230 3 125 8.64E-46 T 12-10-2018 IPR011053 Single hybrid motif M634_21980 6c43f8c29d665e9fa77ec1a2676a8a5c 126 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 2 124 41.615 T 12-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 M634_21980 6c43f8c29d665e9fa77ec1a2676a8a5c 126 Gene3D G3DSA:2.40.50.100 1 126 3.7E-51 T 12-10-2018 M634_21920 49ad55a1c2335c712a19ca4495ee9603 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 2.2E-34 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M634_21920 49ad55a1c2335c712a19ca4495ee9603 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 2.2E-34 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M634_21920 49ad55a1c2335c712a19ca4495ee9603 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 2.2E-34 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M634_21920 49ad55a1c2335c712a19ca4495ee9603 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 2.2E-34 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M634_21920 49ad55a1c2335c712a19ca4495ee9603 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 2.2E-34 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M634_21920 49ad55a1c2335c712a19ca4495ee9603 289 Pfam PF01039 Carboxyl transferase domain 102 240 2.8E-12 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 M634_21920 49ad55a1c2335c712a19ca4495ee9603 289 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 35.499 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M634_21920 49ad55a1c2335c712a19ca4495ee9603 289 Gene3D G3DSA:3.90.226.10 25 284 1.1E-76 T 12-10-2018 M634_21920 49ad55a1c2335c712a19ca4495ee9603 289 SUPERFAMILY SSF52096 25 283 1.19E-78 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily M634_21920 49ad55a1c2335c712a19ca4495ee9603 289 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 282 2.4E-128 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M634_08080 3d13429843dfa11820969d2690e0907f 439 SUPERFAMILY SSF56796 27 407 2.62E-87 T 12-10-2018 M634_08080 3d13429843dfa11820969d2690e0907f 439 Gene3D G3DSA:3.40.50.1970 22 207 5.8E-48 T 12-10-2018 M634_08080 3d13429843dfa11820969d2690e0907f 439 Gene3D G3DSA:1.20.1090.10 214 411 3.0E-39 T 12-10-2018 M634_08080 3d13429843dfa11820969d2690e0907f 439 Pfam PF00465 Iron-containing alcohol dehydrogenase 35 399 6.0E-89 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 M634_14355 060212ba245ab13905dd477713b51f24 462 Gene3D G3DSA:1.20.1250.20 221 430 1.0E-10 T 12-10-2018 M634_14355 060212ba245ab13905dd477713b51f24 462 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 18 442 5.7E-107 T 12-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 M634_14355 060212ba245ab13905dd477713b51f24 462 Pfam PF13347 MFS/sugar transport protein 20 430 2.8E-79 T 12-10-2018 M634_14355 060212ba245ab13905dd477713b51f24 462 SUPERFAMILY SSF103473 10 425 4.27E-27 T 12-10-2018 IPR036259 MFS transporter superfamily M634_14355 060212ba245ab13905dd477713b51f24 462 Gene3D G3DSA:1.20.1250.20 7 209 3.4E-9 T 12-10-2018 M634_02095 032c935dcf42299cfae31d7fe91df64c 377 Pfam PF02222 ATP-grasp domain 101 274 6.8E-52 T 12-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type M634_02095 032c935dcf42299cfae31d7fe91df64c 377 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 2 346 36.596 T 12-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 M634_02095 032c935dcf42299cfae31d7fe91df64c 377 SUPERFAMILY SSF51246 299 371 2.35E-19 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 M634_02095 032c935dcf42299cfae31d7fe91df64c 377 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 2 350 1.1E-104 T 12-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 M634_02095 032c935dcf42299cfae31d7fe91df64c 377 SUPERFAMILY SSF56059 92 295 2.3E-56 T 12-10-2018 M634_02095 032c935dcf42299cfae31d7fe91df64c 377 Gene3D G3DSA:3.40.50.20 1 77 8.7E-17 T 12-10-2018 M634_02095 032c935dcf42299cfae31d7fe91df64c 377 Gene3D G3DSA:3.30.470.20 163 375 1.2E-72 T 12-10-2018 M634_02095 032c935dcf42299cfae31d7fe91df64c 377 SUPERFAMILY SSF52440 1 88 6.04E-15 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily M634_02095 032c935dcf42299cfae31d7fe91df64c 377 Gene3D G3DSA:3.30.1490.20 102 162 1.1E-17 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 M634_23560 b5e44dec7180f4e0ad75e6a08b3a2b1e 516 Gene3D G3DSA:3.30.450.20 3 110 2.8E-19 T 12-10-2018 M634_23560 b5e44dec7180f4e0ad75e6a08b3a2b1e 516 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 480 3.4E-40 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_23560 b5e44dec7180f4e0ad75e6a08b3a2b1e 516 SUPERFAMILY SSF55785 15 108 6.93E-22 T 12-10-2018 IPR035965 PAS domain superfamily M634_23560 b5e44dec7180f4e0ad75e6a08b3a2b1e 516 Gene3D G3DSA:1.10.287.950 184 516 6.1E-62 T 12-10-2018 M634_23560 b5e44dec7180f4e0ad75e6a08b3a2b1e 516 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 16 103 2.7E-9 T 12-10-2018 IPR000014 PAS domain M634_23560 b5e44dec7180f4e0ad75e6a08b3a2b1e 516 SMART SM00283 255 516 2.1E-65 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_23560 b5e44dec7180f4e0ad75e6a08b3a2b1e 516 Pfam PF08447 PAS fold 26 108 3.1E-17 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 M634_23560 b5e44dec7180f4e0ad75e6a08b3a2b1e 516 SUPERFAMILY SSF58104 261 515 7.32E-70 T 12-10-2018 M634_23560 b5e44dec7180f4e0ad75e6a08b3a2b1e 516 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 353 380 2.7E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M634_23560 b5e44dec7180f4e0ad75e6a08b3a2b1e 516 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 382 411 2.7E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M634_23560 b5e44dec7180f4e0ad75e6a08b3a2b1e 516 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 277 306 2.7E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M634_00505 bfbf2dfc2e294aa33a494a5b5440026a 211 Pfam PF08238 Sel1 repeat 109 143 1.3E-4 T 12-10-2018 IPR006597 Sel1-like repeat M634_00505 bfbf2dfc2e294aa33a494a5b5440026a 211 Pfam PF08238 Sel1 repeat 74 106 0.011 T 12-10-2018 IPR006597 Sel1-like repeat M634_00505 bfbf2dfc2e294aa33a494a5b5440026a 211 SUPERFAMILY SSF81901 64 178 3.92E-22 T 12-10-2018 M634_00505 bfbf2dfc2e294aa33a494a5b5440026a 211 Gene3D G3DSA:1.25.40.10 23 209 1.5E-25 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_00505 bfbf2dfc2e294aa33a494a5b5440026a 211 SMART SM00671 144 179 22.0 T 12-10-2018 IPR006597 Sel1-like repeat M634_00505 bfbf2dfc2e294aa33a494a5b5440026a 211 SMART SM00671 72 107 0.0025 T 12-10-2018 IPR006597 Sel1-like repeat M634_00505 bfbf2dfc2e294aa33a494a5b5440026a 211 SMART SM00671 108 143 3.2E-5 T 12-10-2018 IPR006597 Sel1-like repeat M634_04915 0c899eef687a9925cb863214a46be94c 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 12-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 M634_04915 0c899eef687a9925cb863214a46be94c 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 36.29 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 M634_04915 0c899eef687a9925cb863214a46be94c 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 3.0E-38 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 M634_04915 0c899eef687a9925cb863214a46be94c 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 3.0E-38 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 M634_04915 0c899eef687a9925cb863214a46be94c 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 3.0E-38 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 M634_04915 0c899eef687a9925cb863214a46be94c 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 3.0E-38 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 M634_04915 0c899eef687a9925cb863214a46be94c 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 3.0E-38 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 M634_04915 0c899eef687a9925cb863214a46be94c 141 Pfam PF00334 Nucleoside diphosphate kinase 4 138 1.7E-58 T 12-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 M634_04915 0c899eef687a9925cb863214a46be94c 141 Gene3D G3DSA:3.30.70.141 1 140 1.7E-59 T 12-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 M634_04915 0c899eef687a9925cb863214a46be94c 141 SUPERFAMILY SSF54919 1 140 2.1E-61 T 12-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 M634_04915 0c899eef687a9925cb863214a46be94c 141 SMART SM00562 3 140 6.3E-91 T 12-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 M634_05975 dca4d442e26dd2da883ffc1ac6fc0b06 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 299 1.3E-67 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme M634_05975 dca4d442e26dd2da883ffc1ac6fc0b06 322 Gene3D G3DSA:3.40.50.1100 12 306 1.2E-125 T 12-10-2018 M634_05975 dca4d442e26dd2da883ffc1ac6fc0b06 322 Gene3D G3DSA:3.40.50.1100 43 145 1.2E-125 T 12-10-2018 M634_05975 dca4d442e26dd2da883ffc1ac6fc0b06 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 311 4.4E-135 T 12-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 M634_05975 dca4d442e26dd2da883ffc1ac6fc0b06 322 SUPERFAMILY SSF53686 3 313 6.16E-96 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme M634_05975 dca4d442e26dd2da883ffc1ac6fc0b06 322 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 311 2.8E-142 T 12-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 M634_05975 dca4d442e26dd2da883ffc1ac6fc0b06 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 12-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 M634_00200 3e79737b27a32b7b683db050a5ccc583 366 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 14 359 4.8E-120 T 12-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 M634_00200 3e79737b27a32b7b683db050a5ccc583 366 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 360 75.271 T 12-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 M634_00200 3e79737b27a32b7b683db050a5ccc583 366 Gene3D G3DSA:1.20.1090.10 177 366 2.2E-70 T 12-10-2018 M634_00200 3e79737b27a32b7b683db050a5ccc583 366 PIRSF PIRSF001455 22 365 1.5E-106 T 12-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 M634_00200 3e79737b27a32b7b683db050a5ccc583 366 Gene3D G3DSA:3.40.50.1970 1 176 1.9E-65 T 12-10-2018 M634_00200 3e79737b27a32b7b683db050a5ccc583 366 SUPERFAMILY SSF56796 4 360 1.1E-117 T 12-10-2018 M634_00200 3e79737b27a32b7b683db050a5ccc583 366 Pfam PF01761 3-dehydroquinate synthase 72 329 1.1E-110 T 12-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 M634_00845 e1b83be9925fdbd2b55f0369e3ca414f 209 Gene3D G3DSA:3.40.50.2300 3 132 3.7E-27 T 12-10-2018 M634_00845 e1b83be9925fdbd2b55f0369e3ca414f 209 Pfam PF00072 Response regulator receiver domain 7 120 6.2E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_00845 e1b83be9925fdbd2b55f0369e3ca414f 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 3.6E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_00845 e1b83be9925fdbd2b55f0369e3ca414f 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 3.6E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_00845 e1b83be9925fdbd2b55f0369e3ca414f 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 3.6E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_00845 e1b83be9925fdbd2b55f0369e3ca414f 209 SMART SM00448 5 119 4.9E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_00845 e1b83be9925fdbd2b55f0369e3ca414f 209 SMART SM00421 147 204 5.0E-23 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_00845 e1b83be9925fdbd2b55f0369e3ca414f 209 SUPERFAMILY SSF52172 4 173 7.55E-27 T 12-10-2018 IPR011006 CheY-like superfamily M634_00845 e1b83be9925fdbd2b55f0369e3ca414f 209 Gene3D G3DSA:1.10.10.10 148 209 1.2E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_00845 e1b83be9925fdbd2b55f0369e3ca414f 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 2.8E-20 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_00845 e1b83be9925fdbd2b55f0369e3ca414f 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_09470 1b9cf08953838f9d598610b665a1b8c4 639 SUPERFAMILY SSF52540 3 236 1.66E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_09470 1b9cf08953838f9d598610b665a1b8c4 639 Pfam PF16326 ABC transporter C-terminal domain 565 633 9.6E-22 T 12-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 M634_09470 1b9cf08953838f9d598610b665a1b8c4 639 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_09470 1b9cf08953838f9d598610b665a1b8c4 639 Gene3D G3DSA:3.40.50.300 4 279 7.2E-67 T 12-10-2018 M634_09470 1b9cf08953838f9d598610b665a1b8c4 639 Pfam PF12848 ABC transporter 224 297 6.7E-11 T 12-10-2018 IPR032781 ABC-transporter extension domain M634_09470 1b9cf08953838f9d598610b665a1b8c4 639 SMART SM00382 344 514 1.3E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_09470 1b9cf08953838f9d598610b665a1b8c4 639 SMART SM00382 28 230 6.3E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_09470 1b9cf08953838f9d598610b665a1b8c4 639 Gene3D G3DSA:1.10.287.380 555 638 3.0E-29 T 12-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 M634_09470 1b9cf08953838f9d598610b665a1b8c4 639 SUPERFAMILY SSF52540 310 518 9.77E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_09470 1b9cf08953838f9d598610b665a1b8c4 639 Pfam PF00005 ABC transporter 19 185 2.5E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_09470 1b9cf08953838f9d598610b665a1b8c4 639 Pfam PF00005 ABC transporter 336 469 1.3E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_09470 1b9cf08953838f9d598610b665a1b8c4 639 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_09470 1b9cf08953838f9d598610b665a1b8c4 639 Gene3D G3DSA:3.40.50.300 281 551 1.3E-68 T 12-10-2018 M634_19190 f9244f71578208adb36578fa45aa16eb 518 SUPERFAMILY SSF47413 12 84 6.19E-12 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M634_19190 f9244f71578208adb36578fa45aa16eb 518 SMART SM00530 17 79 9.8E-11 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 M634_19190 f9244f71578208adb36578fa45aa16eb 518 Pfam PF12268 Protein of unknown function (DUF3612) 327 501 4.6E-106 T 12-10-2018 IPR022055 Protein of unknown function DUF3612 M634_19190 f9244f71578208adb36578fa45aa16eb 518 Pfam PF06114 IrrE N-terminal-like domain 210 326 7.9E-5 T 12-10-2018 IPR010359 IrrE N-terminal-like domain M634_19190 f9244f71578208adb36578fa45aa16eb 518 Gene3D G3DSA:1.10.260.40 11 93 7.9E-14 T 12-10-2018 M634_19190 f9244f71578208adb36578fa45aa16eb 518 Pfam PF01381 Helix-turn-helix 18 79 1.7E-8 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 M634_21110 41e89c23f8e1886c71435629cf77eb83 501 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_21110 41e89c23f8e1886c71435629cf77eb83 501 SMART SM00382 278 472 8.8E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_21110 41e89c23f8e1886c71435629cf77eb83 501 SMART SM00382 30 219 4.7E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_21110 41e89c23f8e1886c71435629cf77eb83 501 Gene3D G3DSA:3.40.50.300 1 239 6.2E-57 T 12-10-2018 M634_21110 41e89c23f8e1886c71435629cf77eb83 501 Pfam PF00005 ABC transporter 21 170 1.2E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_21110 41e89c23f8e1886c71435629cf77eb83 501 Pfam PF00005 ABC transporter 270 423 1.8E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_21110 41e89c23f8e1886c71435629cf77eb83 501 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_21110 41e89c23f8e1886c71435629cf77eb83 501 SUPERFAMILY SSF52540 5 228 4.13E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_21110 41e89c23f8e1886c71435629cf77eb83 501 SUPERFAMILY SSF52540 269 480 1.55E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_21110 41e89c23f8e1886c71435629cf77eb83 501 Gene3D G3DSA:3.40.50.300 265 497 5.2E-47 T 12-10-2018 M634_13910 e42db56c872c2dac957c5d4e56adfa7a 1159 SMART SM00481 7 74 3.4E-25 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal M634_13910 e42db56c872c2dac957c5d4e56adfa7a 1159 Gene3D G3DSA:1.10.10.1600 433 510 2.3E-32 T 12-10-2018 M634_13910 e42db56c872c2dac957c5d4e56adfa7a 1159 Gene3D G3DSA:3.20.20.140 1 270 2.4E-91 T 12-10-2018 M634_13910 e42db56c872c2dac957c5d4e56adfa7a 1159 SUPERFAMILY SSF50249 976 1064 2.4E-5 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_13910 e42db56c872c2dac957c5d4e56adfa7a 1159 Pfam PF02811 PHP domain 8 171 1.5E-42 T 12-10-2018 IPR004013 PHP domain GO:0003824 M634_13910 e42db56c872c2dac957c5d4e56adfa7a 1159 Pfam PF14579 Helix-hairpin-helix motif 809 897 7.0E-26 T 12-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_13910 e42db56c872c2dac957c5d4e56adfa7a 1159 Pfam PF01336 OB-fold nucleic acid binding domain 993 1071 9.0E-11 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 M634_13910 e42db56c872c2dac957c5d4e56adfa7a 1159 Gene3D G3DSA:2.40.50.140 983 1072 4.0E-9 T 12-10-2018 M634_13910 e42db56c872c2dac957c5d4e56adfa7a 1159 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 292 735 1.5E-174 T 12-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_13910 e42db56c872c2dac957c5d4e56adfa7a 1159 SUPERFAMILY SSF89550 5 263 6.87E-13 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 M634_13910 e42db56c872c2dac957c5d4e56adfa7a 1159 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1030 0.0 T 12-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_17440 658e356f1659c5220e5362c3e95d50ef 146 SMART SM00226 3 145 8.5E-46 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I M634_17440 658e356f1659c5220e5362c3e95d50ef 146 Gene3D G3DSA:3.40.50.2300 1 146 4.3E-48 T 12-10-2018 M634_17440 658e356f1659c5220e5362c3e95d50ef 146 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 142 8.8E-34 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I M634_17440 658e356f1659c5220e5362c3e95d50ef 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 2.5E-22 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 M634_17440 658e356f1659c5220e5362c3e95d50ef 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 2.5E-22 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 M634_17440 658e356f1659c5220e5362c3e95d50ef 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 117 132 2.5E-22 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 M634_17440 658e356f1659c5220e5362c3e95d50ef 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 2.5E-22 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 M634_17440 658e356f1659c5220e5362c3e95d50ef 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 101 114 2.5E-22 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 M634_17440 658e356f1659c5220e5362c3e95d50ef 146 SUPERFAMILY SSF52788 1 146 3.92E-38 T 12-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily M634_17415 a51def72cc97129ce539feb6e59c9f55 487 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 24 199 6.5E-36 T 12-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal M634_17415 a51def72cc97129ce539feb6e59c9f55 487 Hamap MF_01905 GlcNAc-binding protein A [gbpA]. 3 486 56.88 T 12-10-2018 IPR020879 N-acetylglucosamine-binding protein A GO:0008061 M634_17415 a51def72cc97129ce539feb6e59c9f55 487 Gene3D G3DSA:2.60.40.2550 317 414 2.2E-38 T 12-10-2018 M634_17415 a51def72cc97129ce539feb6e59c9f55 487 SUPERFAMILY SSF81296 24 203 2.1E-56 T 12-10-2018 IPR014756 Immunoglobulin E-set M634_17415 a51def72cc97129ce539feb6e59c9f55 487 Gene3D G3DSA:3.30.70.2150 209 316 6.5E-40 T 12-10-2018 M634_17415 a51def72cc97129ce539feb6e59c9f55 487 Gene3D G3DSA:2.70.50.50 24 202 4.8E-82 T 12-10-2018 M634_13330 c76473e77b7b0c470a0d7a2950ae84c6 163 Pfam PF02674 Colicin V production protein 4 142 6.1E-36 T 12-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 M634_04810 abdea2976a3ea9f5450c38a3795c4764 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 68 8.6E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_04810 abdea2976a3ea9f5450c38a3795c4764 301 Gene3D G3DSA:3.40.190.10 98 297 7.9E-54 T 12-10-2018 M634_04810 abdea2976a3ea9f5450c38a3795c4764 301 SUPERFAMILY SSF46785 4 117 1.09E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_04810 abdea2976a3ea9f5450c38a3795c4764 301 Gene3D G3DSA:3.40.190.10 168 269 7.9E-54 T 12-10-2018 M634_04810 abdea2976a3ea9f5450c38a3795c4764 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.7E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_04810 abdea2976a3ea9f5450c38a3795c4764 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.7E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_04810 abdea2976a3ea9f5450c38a3795c4764 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.7E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_04810 abdea2976a3ea9f5450c38a3795c4764 301 Pfam PF03466 LysR substrate binding domain 96 299 5.4E-37 T 12-10-2018 IPR005119 LysR, substrate-binding M634_04810 abdea2976a3ea9f5450c38a3795c4764 301 Gene3D G3DSA:1.10.10.10 2 89 9.9E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_04810 abdea2976a3ea9f5450c38a3795c4764 301 SUPERFAMILY SSF53850 95 300 1.01E-34 T 12-10-2018 M634_07805 955576d632bbb10639e034574cf5b80c 1033 Gene3D G3DSA:3.30.70.1430 571 669 8.7E-260 T 12-10-2018 M634_07805 955576d632bbb10639e034574cf5b80c 1033 PRINTS PR00702 Acriflavin resistance protein family signature 24 48 2.4E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_07805 955576d632bbb10639e034574cf5b80c 1033 PRINTS PR00702 Acriflavin resistance protein family signature 346 369 2.4E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_07805 955576d632bbb10639e034574cf5b80c 1033 PRINTS PR00702 Acriflavin resistance protein family signature 52 70 2.4E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_07805 955576d632bbb10639e034574cf5b80c 1033 PRINTS PR00702 Acriflavin resistance protein family signature 453 476 2.4E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_07805 955576d632bbb10639e034574cf5b80c 1033 PRINTS PR00702 Acriflavin resistance protein family signature 400 424 2.4E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_07805 955576d632bbb10639e034574cf5b80c 1033 PRINTS PR00702 Acriflavin resistance protein family signature 478 501 2.4E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_07805 955576d632bbb10639e034574cf5b80c 1033 Pfam PF00873 AcrB/AcrD/AcrF family 18 1027 2.9E-173 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_07805 955576d632bbb10639e034574cf5b80c 1033 SUPERFAMILY SSF82693 150 337 3.14E-18 T 12-10-2018 M634_07805 955576d632bbb10639e034574cf5b80c 1033 Gene3D G3DSA:3.30.2090.10 193 285 8.7E-260 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_07805 955576d632bbb10639e034574cf5b80c 1033 Gene3D G3DSA:3.30.2090.10 721 811 8.7E-260 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_07805 955576d632bbb10639e034574cf5b80c 1033 SUPERFAMILY SSF82714 728 802 2.09E-9 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_07805 955576d632bbb10639e034574cf5b80c 1033 SUPERFAMILY SSF82866 807 1029 4.05E-48 T 12-10-2018 M634_07805 955576d632bbb10639e034574cf5b80c 1033 SUPERFAMILY SSF82866 306 505 1.31E-33 T 12-10-2018 M634_07805 955576d632bbb10639e034574cf5b80c 1033 Gene3D G3DSA:1.20.1640.10 24 519 8.7E-260 T 12-10-2018 M634_07805 955576d632bbb10639e034574cf5b80c 1033 Gene3D G3DSA:3.30.70.1430 54 819 8.7E-260 T 12-10-2018 M634_07805 955576d632bbb10639e034574cf5b80c 1033 SUPERFAMILY SSF82693 54 149 5.93E-22 T 12-10-2018 M634_07805 955576d632bbb10639e034574cf5b80c 1033 Gene3D G3DSA:1.20.1640.10 520 1023 8.7E-260 T 12-10-2018 M634_07805 955576d632bbb10639e034574cf5b80c 1033 Gene3D G3DSA:3.30.70.1440 670 871 8.7E-260 T 12-10-2018 M634_07805 955576d632bbb10639e034574cf5b80c 1033 SUPERFAMILY SSF82714 198 281 7.06E-12 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_07805 955576d632bbb10639e034574cf5b80c 1033 Gene3D G3DSA:3.30.70.1320 150 342 8.7E-260 T 12-10-2018 M634_08330 a161d0c5c7074c2f9d5efae8ffacc042 105 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 103 26.323 T 12-10-2018 IPR002765 Uncharacterised protein family UPF0145 M634_08330 a161d0c5c7074c2f9d5efae8ffacc042 105 Gene3D G3DSA:3.30.110.70 1 105 1.3E-33 T 12-10-2018 M634_08330 a161d0c5c7074c2f9d5efae8ffacc042 105 SUPERFAMILY SSF117782 1 103 2.75E-38 T 12-10-2018 IPR035439 UPF0145 domain superfamily M634_08330 a161d0c5c7074c2f9d5efae8ffacc042 105 Pfam PF01906 Putative heavy-metal-binding 1 103 7.5E-40 T 12-10-2018 IPR002765 Uncharacterised protein family UPF0145 M634_20485 2577090e069b301a5d4afedd1daf670e 207 Gene3D G3DSA:3.40.50.150 11 200 1.0E-18 T 12-10-2018 M634_20485 2577090e069b301a5d4afedd1daf670e 207 Pfam PF13649 Methyltransferase domain 54 146 1.5E-12 T 12-10-2018 M634_20485 2577090e069b301a5d4afedd1daf670e 207 SUPERFAMILY SSF53335 11 202 2.67E-19 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_07730 43da9a7e0331520aad6f5e82850e5c06 579 SUPERFAMILY SSF51445 194 530 8.55E-76 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M634_07730 43da9a7e0331520aad6f5e82850e5c06 579 Gene3D G3DSA:3.20.20.70 189 495 3.4E-91 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_07730 43da9a7e0331520aad6f5e82850e5c06 579 Pfam PF02065 Melibiase 162 352 5.6E-17 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 M634_04060 596886e9351ed2e5921cd9e1e68bdf50 194 SUPERFAMILY SSF53474 5 192 1.18E-21 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_04060 596886e9351ed2e5921cd9e1e68bdf50 194 Gene3D G3DSA:3.40.50.1820 6 194 3.1E-62 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_04060 596886e9351ed2e5921cd9e1e68bdf50 194 Pfam PF05728 Uncharacterised protein family (UPF0227) 7 192 4.2E-69 T 12-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA M634_22740 62400dbd29f7e04c7c5c36016ad3e12e 420 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 51 419 3.6E-111 T 12-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 M634_22740 62400dbd29f7e04c7c5c36016ad3e12e 420 Gene3D G3DSA:3.30.70.420 146 261 5.6E-109 T 12-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 M634_22740 62400dbd29f7e04c7c5c36016ad3e12e 420 Gene3D G3DSA:3.90.770.10 92 405 5.6E-109 T 12-10-2018 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain superfamily GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 M634_22740 62400dbd29f7e04c7c5c36016ad3e12e 420 SUPERFAMILY SSF56542 26 409 4.84E-79 T 12-10-2018 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamily GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 M634_22740 62400dbd29f7e04c7c5c36016ad3e12e 420 ProSitePatterns PS00318 Hydroxymethylglutaryl-coenzyme A reductases signature 2. 356 363 - T 12-10-2018 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 M634_22740 62400dbd29f7e04c7c5c36016ad3e12e 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 344 365 1.7E-38 T 12-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 M634_22740 62400dbd29f7e04c7c5c36016ad3e12e 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 112 132 1.7E-38 T 12-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 M634_22740 62400dbd29f7e04c7c5c36016ad3e12e 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 201 219 1.7E-38 T 12-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 M634_22740 62400dbd29f7e04c7c5c36016ad3e12e 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 291 317 1.7E-38 T 12-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 M634_22740 62400dbd29f7e04c7c5c36016ad3e12e 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 81 102 1.7E-38 T 12-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 M634_22740 62400dbd29f7e04c7c5c36016ad3e12e 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 242 267 1.7E-38 T 12-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 M634_22740 62400dbd29f7e04c7c5c36016ad3e12e 420 SUPERFAMILY SSF55035 146 261 8.63E-36 T 12-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 M634_09770 0b61dbf4c98d0d3183e2d25d0e7927d8 350 Gene3D G3DSA:1.20.950.20 118 336 4.3E-66 T 12-10-2018 M634_09770 0b61dbf4c98d0d3183e2d25d0e7927d8 350 Pfam PF01292 Prokaryotic cytochrome b561 125 306 5.7E-26 T 12-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 M634_09770 0b61dbf4c98d0d3183e2d25d0e7927d8 350 SUPERFAMILY SSF81342 119 332 1.1E-46 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 M634_09770 0b61dbf4c98d0d3183e2d25d0e7927d8 350 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 122 326 3.6E-84 T 12-10-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 M634_06735 c7103f4c23b82156302f6347557436a8 364 Gene3D G3DSA:2.40.50.100 59 187 5.0E-71 T 12-10-2018 M634_06735 c7103f4c23b82156302f6347557436a8 364 Gene3D G3DSA:2.40.30.170 47 269 5.0E-71 T 12-10-2018 M634_06735 c7103f4c23b82156302f6347557436a8 364 SUPERFAMILY SSF111369 49 264 3.66E-39 T 12-10-2018 M634_06735 c7103f4c23b82156302f6347557436a8 364 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 35 340 7.5E-87 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 M634_06735 c7103f4c23b82156302f6347557436a8 364 Gene3D G3DSA:1.10.287.470 94 153 5.0E-71 T 12-10-2018 M634_06735 c7103f4c23b82156302f6347557436a8 364 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 45 259 3.3E-29 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M634_06735 c7103f4c23b82156302f6347557436a8 364 Gene3D G3DSA:2.40.420.20 270 338 5.0E-71 T 12-10-2018 M634_02535 32ee28c2a7253c8bcc1330117bce433d 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 681 696 2.1E-78 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_02535 32ee28c2a7253c8bcc1330117bce433d 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 879 892 2.1E-78 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_02535 32ee28c2a7253c8bcc1330117bce433d 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 733 746 2.1E-78 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_02535 32ee28c2a7253c8bcc1330117bce433d 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 757 782 2.1E-78 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_02535 32ee28c2a7253c8bcc1330117bce433d 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 703 726 2.1E-78 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_02535 32ee28c2a7253c8bcc1330117bce433d 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 658 680 2.1E-78 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_02535 32ee28c2a7253c8bcc1330117bce433d 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 816 827 2.1E-78 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_02535 32ee28c2a7253c8bcc1330117bce433d 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 794 805 2.1E-78 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_02535 32ee28c2a7253c8bcc1330117bce433d 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 848 864 2.1E-78 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_02535 32ee28c2a7253c8bcc1330117bce433d 932 SMART SM00475 7 267 6.2E-122 T 12-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 M634_02535 32ee28c2a7253c8bcc1330117bce433d 932 Gene3D G3DSA:3.30.420.10 330 545 4.9E-69 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M634_02535 32ee28c2a7253c8bcc1330117bce433d 932 Pfam PF00476 DNA polymerase family A 554 929 2.9E-158 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_02535 32ee28c2a7253c8bcc1330117bce433d 932 SUPERFAMILY SSF53098 336 521 7.17E-55 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M634_02535 32ee28c2a7253c8bcc1330117bce433d 932 Gene3D G3DSA:3.30.70.370 667 928 4.4E-114 T 12-10-2018 M634_02535 32ee28c2a7253c8bcc1330117bce433d 932 SUPERFAMILY SSF47807 171 291 6.58E-30 T 12-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily M634_02535 32ee28c2a7253c8bcc1330117bce433d 932 Gene3D G3DSA:1.20.1060.10 546 661 2.4E-44 T 12-10-2018 M634_02535 32ee28c2a7253c8bcc1330117bce433d 932 SMART SM00482 689 896 2.6E-116 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_02535 32ee28c2a7253c8bcc1330117bce433d 932 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 3.5E-54 T 12-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 M634_02535 32ee28c2a7253c8bcc1330117bce433d 932 Gene3D G3DSA:1.10.150.20 712 855 4.4E-114 T 12-10-2018 M634_02535 32ee28c2a7253c8bcc1330117bce433d 932 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 271 1.6E-28 T 12-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 M634_02535 32ee28c2a7253c8bcc1330117bce433d 932 ProSitePatterns PS00447 DNA polymerase family A signature. 757 776 - T 12-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_02535 32ee28c2a7253c8bcc1330117bce433d 932 SMART SM00474 333 520 2.5E-41 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 M634_02535 32ee28c2a7253c8bcc1330117bce433d 932 Pfam PF01612 3'-5' exonuclease 333 517 9.1E-40 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 M634_02535 32ee28c2a7253c8bcc1330117bce433d 932 SMART SM00279 173 208 1.2E-13 T 12-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 M634_02535 32ee28c2a7253c8bcc1330117bce433d 932 TIGRFAM TIGR00593 pola: DNA polymerase I 9 932 2.8E-287 T 12-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_02535 32ee28c2a7253c8bcc1330117bce433d 932 SUPERFAMILY SSF56672 525 932 1.78E-160 T 12-10-2018 M634_02535 32ee28c2a7253c8bcc1330117bce433d 932 SUPERFAMILY SSF88723 7 170 8.59E-58 T 12-10-2018 IPR029060 PIN-like domain superfamily M634_02535 32ee28c2a7253c8bcc1330117bce433d 932 Gene3D G3DSA:1.10.150.20 174 253 1.2E-94 T 12-10-2018 M634_02535 32ee28c2a7253c8bcc1330117bce433d 932 Gene3D G3DSA:3.40.50.1010 9 284 1.2E-94 T 12-10-2018 M634_03310 7703d6b3dfa4abef62e1870fd3fc0451 232 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.529 T 12-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 M634_03310 7703d6b3dfa4abef62e1870fd3fc0451 232 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.5E-40 T 12-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03310 7703d6b3dfa4abef62e1870fd3fc0451 232 SUPERFAMILY SSF54814 2 106 3.4E-36 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 M634_03310 7703d6b3dfa4abef62e1870fd3fc0451 232 SMART SM00322 60 125 7.7E-8 T 12-10-2018 IPR004087 K Homology domain GO:0003676 M634_03310 7703d6b3dfa4abef62e1870fd3fc0451 232 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 12-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03310 7703d6b3dfa4abef62e1870fd3fc0451 232 SUPERFAMILY SSF54821 108 206 1.57E-39 T 12-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03310 7703d6b3dfa4abef62e1870fd3fc0451 232 Gene3D G3DSA:3.30.1140.32 108 208 3.6E-44 T 12-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03310 7703d6b3dfa4abef62e1870fd3fc0451 232 Pfam PF07650 KH domain 38 111 1.5E-18 T 12-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03310 7703d6b3dfa4abef62e1870fd3fc0451 232 Gene3D G3DSA:3.30.300.20 17 107 1.1E-28 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta M634_03310 7703d6b3dfa4abef62e1870fd3fc0451 232 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 9.5E-97 T 12-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 M634_05215 3957a32c5fe09ed53bd49bff2a97d14b 137 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 2.7E-4 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M634_05215 3957a32c5fe09ed53bd49bff2a97d14b 137 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 27 7.3E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M634_15375 f94d50ae7da3304dcfc8873c250a9e5d 410 SUPERFAMILY SSF55021 338 409 6.49E-18 T 12-10-2018 M634_15375 f94d50ae7da3304dcfc8873c250a9e5d 410 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 326 1.2E-38 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 M634_15375 f94d50ae7da3304dcfc8873c250a9e5d 410 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site M634_15375 f94d50ae7da3304dcfc8873c250a9e5d 410 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 7.2E-53 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 M634_15375 f94d50ae7da3304dcfc8873c250a9e5d 410 SUPERFAMILY SSF52283 7 136 1.4E-49 T 12-10-2018 M634_15375 f94d50ae7da3304dcfc8873c250a9e5d 410 Gene3D G3DSA:3.30.70.260 328 409 1.5E-32 T 12-10-2018 M634_15375 f94d50ae7da3304dcfc8873c250a9e5d 410 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site M634_15375 f94d50ae7da3304dcfc8873c250a9e5d 410 Gene3D G3DSA:3.40.50.720 109 297 4.4E-111 T 12-10-2018 M634_15375 f94d50ae7da3304dcfc8873c250a9e5d 410 SUPERFAMILY SSF51735 108 295 7.81E-59 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_15375 f94d50ae7da3304dcfc8873c250a9e5d 410 Gene3D G3DSA:3.40.50.720 14 312 4.4E-111 T 12-10-2018 M634_15375 f94d50ae7da3304dcfc8873c250a9e5d 410 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 12-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 M634_14310 80b9c8aeffdd265e64f80b34a03d7766 284 Pfam PF00230 Major intrinsic protein 6 252 5.6E-63 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 M634_14310 80b9c8aeffdd265e64f80b34a03d7766 284 ProSitePatterns PS00221 MIP family signature. 68 76 - T 12-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 M634_14310 80b9c8aeffdd265e64f80b34a03d7766 284 TIGRFAM TIGR00861 MIP: MIP family channel proteins 15 252 5.2E-68 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 M634_14310 80b9c8aeffdd265e64f80b34a03d7766 284 PRINTS PR00783 Major intrinsic protein family signature 153 171 3.2E-50 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 M634_14310 80b9c8aeffdd265e64f80b34a03d7766 284 PRINTS PR00783 Major intrinsic protein family signature 11 30 3.2E-50 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 M634_14310 80b9c8aeffdd265e64f80b34a03d7766 284 PRINTS PR00783 Major intrinsic protein family signature 87 106 3.2E-50 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 M634_14310 80b9c8aeffdd265e64f80b34a03d7766 284 PRINTS PR00783 Major intrinsic protein family signature 235 255 3.2E-50 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 M634_14310 80b9c8aeffdd265e64f80b34a03d7766 284 PRINTS PR00783 Major intrinsic protein family signature 186 208 3.2E-50 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 M634_14310 80b9c8aeffdd265e64f80b34a03d7766 284 PRINTS PR00783 Major intrinsic protein family signature 50 74 3.2E-50 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 M634_14310 80b9c8aeffdd265e64f80b34a03d7766 284 Gene3D G3DSA:1.20.1080.10 4 260 1.9E-95 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 M634_14310 80b9c8aeffdd265e64f80b34a03d7766 284 SUPERFAMILY SSF81338 9 254 2.75E-74 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 M634_13990 0a72eff7f25236de1b92d187bb787f37 292 Gene3D G3DSA:3.90.230.10 1 290 7.8E-104 T 12-10-2018 M634_13990 0a72eff7f25236de1b92d187bb787f37 292 Hamap MF_01974 Methionine aminopeptidase [map]. 3 280 40.656 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 M634_13990 0a72eff7f25236de1b92d187bb787f37 292 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 279 3.3E-83 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 M634_13990 0a72eff7f25236de1b92d187bb787f37 292 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 197 215 - T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 M634_13990 0a72eff7f25236de1b92d187bb787f37 292 Pfam PF00557 Metallopeptidase family M24 12 271 2.4E-45 T 12-10-2018 IPR000994 Peptidase M24 M634_13990 0a72eff7f25236de1b92d187bb787f37 292 SUPERFAMILY SSF55920 3 282 1.7E-81 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like M634_00385 a0ee1b70ed27a7c46ee40426354641df 317 SUPERFAMILY SSF56235 9 312 1.1E-97 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal M634_00385 a0ee1b70ed27a7c46ee40426354641df 317 Gene3D G3DSA:3.60.20.30 182 317 2.7E-45 T 12-10-2018 M634_00385 a0ee1b70ed27a7c46ee40426354641df 317 Pfam PF01112 Asparaginase 11 310 3.3E-109 T 12-10-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 M634_05075 3599ec8cdf70ddd2fdf8a720f62d6654 307 SUPERFAMILY SSF46785 10 112 1.43E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_05075 3599ec8cdf70ddd2fdf8a720f62d6654 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 6.2E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_05075 3599ec8cdf70ddd2fdf8a720f62d6654 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 6.2E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_05075 3599ec8cdf70ddd2fdf8a720f62d6654 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 6.2E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_05075 3599ec8cdf70ddd2fdf8a720f62d6654 307 Gene3D G3DSA:3.40.190.10 162 276 1.0E-43 T 12-10-2018 M634_05075 3599ec8cdf70ddd2fdf8a720f62d6654 307 Pfam PF03466 LysR substrate binding domain 94 300 3.1E-21 T 12-10-2018 IPR005119 LysR, substrate-binding M634_05075 3599ec8cdf70ddd2fdf8a720f62d6654 307 Gene3D G3DSA:3.40.190.10 102 299 1.0E-43 T 12-10-2018 M634_05075 3599ec8cdf70ddd2fdf8a720f62d6654 307 Gene3D G3DSA:1.10.10.10 7 96 3.5E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_05075 3599ec8cdf70ddd2fdf8a720f62d6654 307 SUPERFAMILY SSF53850 94 304 4.34E-23 T 12-10-2018 M634_05075 3599ec8cdf70ddd2fdf8a720f62d6654 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 65 3.6E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_07035 27ee46ca4b9c989d0f4cb3ded0ad72f1 691 SUPERFAMILY SSF52540 243 666 3.07E-6 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_07035 27ee46ca4b9c989d0f4cb3ded0ad72f1 691 Hamap MF_02205 ATP-dependent DNA helicase DinG [dinG]. 33 690 36.66 T 12-10-2018 IPR039000 ATP-dependent DNA helicase DinG GO:0004003 M634_07035 27ee46ca4b9c989d0f4cb3ded0ad72f1 691 Gene3D G3DSA:3.40.50.300 499 689 5.9E-34 T 12-10-2018 M634_07035 27ee46ca4b9c989d0f4cb3ded0ad72f1 691 Gene3D G3DSA:3.40.50.300 25 304 1.5E-40 T 12-10-2018 M634_07035 27ee46ca4b9c989d0f4cb3ded0ad72f1 691 SMART SM00491 535 671 7.3E-28 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 M634_07035 27ee46ca4b9c989d0f4cb3ded0ad72f1 691 SUPERFAMILY SSF52540 14 666 3.15E-16 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_07035 27ee46ca4b9c989d0f4cb3ded0ad72f1 691 Pfam PF13307 Helicase C-terminal domain 526 684 1.4E-36 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 M634_07035 27ee46ca4b9c989d0f4cb3ded0ad72f1 691 Pfam PF04851 Type III restriction enzyme, res subunit 24 254 6.3E-5 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 M634_14305 a7e053452e580c5f6ac54f5b17fb3960 456 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 439 4.0E-235 T 12-10-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 M634_14305 a7e053452e580c5f6ac54f5b17fb3960 456 Gene3D G3DSA:1.20.1250.20 18 227 6.9E-58 T 12-10-2018 M634_14305 a7e053452e580c5f6ac54f5b17fb3960 456 Gene3D G3DSA:1.20.1250.20 241 452 2.3E-63 T 12-10-2018 M634_14305 a7e053452e580c5f6ac54f5b17fb3960 456 Pfam PF07690 Major Facilitator Superfamily 34 401 1.2E-50 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M634_14305 a7e053452e580c5f6ac54f5b17fb3960 456 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 418 2.8E-150 T 12-10-2018 M634_14305 a7e053452e580c5f6ac54f5b17fb3960 456 PIRSF PIRSF002808 5 453 8.3E-170 T 12-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 M634_14305 a7e053452e580c5f6ac54f5b17fb3960 456 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 12-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 M634_14305 a7e053452e580c5f6ac54f5b17fb3960 456 SUPERFAMILY SSF103473 13 451 1.15E-87 T 12-10-2018 IPR036259 MFS transporter superfamily M634_02570 d57bb9c51c8a9906e6d432abbd7ec43e 463 SUPERFAMILY SSF102114 12 450 9.55E-145 T 12-10-2018 M634_02570 d57bb9c51c8a9906e6d432abbd7ec43e 463 Gene3D G3DSA:3.80.30.20 7 369 2.7E-137 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe M634_02570 d57bb9c51c8a9906e6d432abbd7ec43e 463 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 14 463 1.8E-207 T 12-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 M634_02570 d57bb9c51c8a9906e6d432abbd7ec43e 463 Gene3D G3DSA:1.10.10.920 370 463 2.1E-34 T 12-10-2018 M634_02570 d57bb9c51c8a9906e6d432abbd7ec43e 463 Pfam PF04055 Radical SAM superfamily 63 234 3.4E-18 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 M634_02570 d57bb9c51c8a9906e6d432abbd7ec43e 463 SMART SM00729 58 278 4.6E-55 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 M634_02570 d57bb9c51c8a9906e6d432abbd7ec43e 463 Pfam PF06969 HemN C-terminal domain 369 437 1.3E-11 T 12-10-2018 IPR010723 HemN, C-terminal M634_02570 d57bb9c51c8a9906e6d432abbd7ec43e 463 PIRSF PIRSF000167 9 460 3.3E-173 T 12-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 M634_22605 cf5e477d8a0e7aa665050602b3eb40c6 485 Pfam PF13500 AAA domain 9 238 9.8E-23 T 12-10-2018 M634_22605 cf5e477d8a0e7aa665050602b3eb40c6 485 Gene3D G3DSA:3.40.50.300 7 250 2.7E-56 T 12-10-2018 M634_22605 cf5e477d8a0e7aa665050602b3eb40c6 485 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 485 196.738 T 12-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 M634_22605 cf5e477d8a0e7aa665050602b3eb40c6 485 Gene3D G3DSA:3.40.50.880 268 453 9.7E-20 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M634_22605 cf5e477d8a0e7aa665050602b3eb40c6 485 SUPERFAMILY SSF52317 196 402 4.13E-36 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M634_22605 cf5e477d8a0e7aa665050602b3eb40c6 485 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 10 482 3.9E-156 T 12-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 M634_22605 cf5e477d8a0e7aa665050602b3eb40c6 485 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 256 438 2.9E-59 T 12-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 M634_22605 cf5e477d8a0e7aa665050602b3eb40c6 485 SUPERFAMILY SSF52540 8 243 1.68E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_08800 c5a645c30d3487a28394d19cd74733b0 649 SUPERFAMILY SSF53649 283 595 4.58E-70 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 M634_08800 c5a645c30d3487a28394d19cd74733b0 649 Gene3D G3DSA:3.30.1120.80 248 644 1.7E-208 T 12-10-2018 M634_08800 c5a645c30d3487a28394d19cd74733b0 649 Gene3D G3DSA:3.40.720.10 276 572 1.7E-208 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 M634_08800 c5a645c30d3487a28394d19cd74733b0 649 PIRSF PIRSF005091 13 648 5.9E-100 T 12-10-2018 IPR012160 Lipoteichoic acid synthase-like M634_08800 c5a645c30d3487a28394d19cd74733b0 649 Pfam PF00884 Sulfatase 285 555 5.7E-51 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 M634_17550 b7dc342567c46cbc239afd7e6a20b6b7 731 Pfam PF00128 Alpha amylase, catalytic domain 279 353 1.9E-6 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 M634_17550 b7dc342567c46cbc239afd7e6a20b6b7 731 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 632 729 4.2E-16 T 12-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 M634_17550 b7dc342567c46cbc239afd7e6a20b6b7 731 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 119 727 6.0E-247 T 12-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 M634_17550 b7dc342567c46cbc239afd7e6a20b6b7 731 SUPERFAMILY SSF51445 177 620 3.31E-108 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M634_17550 b7dc342567c46cbc239afd7e6a20b6b7 731 SUPERFAMILY SSF81296 25 108 3.03E-12 T 12-10-2018 IPR014756 Immunoglobulin E-set M634_17550 b7dc342567c46cbc239afd7e6a20b6b7 731 SUPERFAMILY SSF51011 627 729 9.47E-28 T 12-10-2018 M634_17550 b7dc342567c46cbc239afd7e6a20b6b7 731 PIRSF PIRSF000463 13 731 1.7E-286 T 12-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 M634_17550 b7dc342567c46cbc239afd7e6a20b6b7 731 Gene3D G3DSA:2.60.40.10 9 224 1.6E-50 T 12-10-2018 IPR013783 Immunoglobulin-like fold M634_17550 b7dc342567c46cbc239afd7e6a20b6b7 731 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 132 210 2.9E-18 T 12-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 M634_17550 b7dc342567c46cbc239afd7e6a20b6b7 731 Gene3D G3DSA:2.60.40.1180 627 730 6.6E-30 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta M634_17550 b7dc342567c46cbc239afd7e6a20b6b7 731 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 95 730 41.386 T 12-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 M634_17550 b7dc342567c46cbc239afd7e6a20b6b7 731 SMART SM00642 254 599 2.2E-6 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 M634_17550 b7dc342567c46cbc239afd7e6a20b6b7 731 Gene3D G3DSA:3.20.20.80 228 626 1.3E-162 T 12-10-2018 M634_08605 b022fab4944d8a7f46847a3304559520 814 Pfam PF01752 Collagenase 317 600 4.2E-108 T 12-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 M634_08605 b022fab4944d8a7f46847a3304559520 814 Gene3D G3DSA:1.10.1740.190 347 488 6.1E-35 T 12-10-2018 M634_08605 b022fab4944d8a7f46847a3304559520 814 Gene3D G3DSA:2.60.40.10 610 691 2.5E-25 T 12-10-2018 IPR013783 Immunoglobulin-like fold M634_08605 b022fab4944d8a7f46847a3304559520 814 Pfam PF08453 Peptidase family M9 N-terminal 78 258 1.0E-55 T 12-10-2018 IPR013661 Peptidase M9, collagenase, N-terminal domain M634_08605 b022fab4944d8a7f46847a3304559520 814 Gene3D G3DSA:1.10.390.20 489 609 1.5E-7 T 12-10-2018 M634_08605 b022fab4944d8a7f46847a3304559520 814 Pfam PF00801 PKD domain 622 682 2.2E-12 T 12-10-2018 IPR000601 PKD domain M634_08605 b022fab4944d8a7f46847a3304559520 814 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 433 449 2.0E-35 T 12-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 M634_08605 b022fab4944d8a7f46847a3304559520 814 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 498 513 2.0E-35 T 12-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 M634_08605 b022fab4944d8a7f46847a3304559520 814 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 476 494 2.0E-35 T 12-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 M634_08605 b022fab4944d8a7f46847a3304559520 814 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 144 162 2.0E-35 T 12-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 M634_08605 b022fab4944d8a7f46847a3304559520 814 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 415 429 2.0E-35 T 12-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 M634_08605 b022fab4944d8a7f46847a3304559520 814 SUPERFAMILY SSF49299 609 691 1.7E-21 T 12-10-2018 IPR035986 PKD domain superfamily M634_08605 b022fab4944d8a7f46847a3304559520 814 SMART SM00089 611 693 5.6E-24 T 12-10-2018 IPR022409 PKD/Chitinase domain M634_18085 aa526f926b4323bc3d0183b7891ff889 251 SUPERFAMILY SSF55785 24 135 4.36E-14 T 12-10-2018 IPR035965 PAS domain superfamily M634_18085 aa526f926b4323bc3d0183b7891ff889 251 Gene3D G3DSA:1.10.10.10 162 229 1.3E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_18085 aa526f926b4323bc3d0183b7891ff889 251 SMART SM00421 168 225 2.4E-6 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_18085 aa526f926b4323bc3d0183b7891ff889 251 Gene3D G3DSA:3.30.450.20 21 140 1.5E-16 T 12-10-2018 M634_18085 aa526f926b4323bc3d0183b7891ff889 251 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 201 3.9E-6 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_18085 aa526f926b4323bc3d0183b7891ff889 251 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 201 213 3.9E-6 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_18085 aa526f926b4323bc3d0183b7891ff889 251 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 185 3.9E-6 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_18085 aa526f926b4323bc3d0183b7891ff889 251 Pfam PF00196 Bacterial regulatory proteins, luxR family 170 225 2.2E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_18085 aa526f926b4323bc3d0183b7891ff889 251 SUPERFAMILY SSF46894 159 230 1.17E-13 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M634_18085 aa526f926b4323bc3d0183b7891ff889 251 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 27 135 1.2E-5 T 12-10-2018 IPR000014 PAS domain M634_18085 aa526f926b4323bc3d0183b7891ff889 251 Pfam PF08448 PAS fold 25 136 1.1E-26 T 12-10-2018 IPR013656 PAS fold-4 M634_05965 d70006c77e22cff23918ff45172fa9b5 574 Gene3D G3DSA:1.10.274.10 21 146 3.1E-80 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 M634_05965 d70006c77e22cff23918ff45172fa9b5 574 SUPERFAMILY SSF52009 125 243 1.31E-34 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 M634_05965 d70006c77e22cff23918ff45172fa9b5 574 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 541 2.3E-124 T 12-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 M634_05965 d70006c77e22cff23918ff45172fa9b5 574 SUPERFAMILY SSF47831 24 143 8.37E-33 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 M634_05965 d70006c77e22cff23918ff45172fa9b5 574 Gene3D G3DSA:3.20.20.60 234 574 6.4E-125 T 12-10-2018 M634_05965 d70006c77e22cff23918ff45172fa9b5 574 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 565 2.1E-246 T 12-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 M634_05965 d70006c77e22cff23918ff45172fa9b5 574 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 2.0E-32 T 12-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 M634_05965 d70006c77e22cff23918ff45172fa9b5 574 Gene3D G3DSA:3.50.30.10 4 233 3.1E-80 T 12-10-2018 M634_05965 d70006c77e22cff23918ff45172fa9b5 574 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 12-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 M634_05965 d70006c77e22cff23918ff45172fa9b5 574 SUPERFAMILY SSF51621 249 549 3.14E-109 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 M634_05965 d70006c77e22cff23918ff45172fa9b5 574 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 12-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 M634_05965 d70006c77e22cff23918ff45172fa9b5 574 PIRSF PIRSF000732 1 574 4.2E-218 T 12-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 M634_05965 d70006c77e22cff23918ff45172fa9b5 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 6.9E-30 T 12-10-2018 M634_05965 d70006c77e22cff23918ff45172fa9b5 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 6.9E-30 T 12-10-2018 M634_05965 d70006c77e22cff23918ff45172fa9b5 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 6.9E-30 T 12-10-2018 M634_05965 d70006c77e22cff23918ff45172fa9b5 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 6.9E-30 T 12-10-2018 M634_05965 d70006c77e22cff23918ff45172fa9b5 574 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 1.9E-20 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 M634_06060 249ab8f5183b4907c251264115a25384 284 SUPERFAMILY SSF52833 3 113 4.95E-26 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M634_06060 249ab8f5183b4907c251264115a25384 284 Pfam PF00085 Thioredoxin 6 109 2.2E-14 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 M634_06060 249ab8f5183b4907c251264115a25384 284 Gene3D G3DSA:3.40.30.10 1 111 4.9E-22 T 12-10-2018 M634_06060 249ab8f5183b4907c251264115a25384 284 Pfam PF14559 Tetratricopeptide repeat 124 190 1.3E-11 T 12-10-2018 M634_06060 249ab8f5183b4907c251264115a25384 284 Pfam PF14561 Tetratricopeptide repeat 195 284 1.8E-29 T 12-10-2018 M634_06060 249ab8f5183b4907c251264115a25384 284 Gene3D G3DSA:1.25.40.10 112 196 9.0E-24 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_06060 249ab8f5183b4907c251264115a25384 284 SUPERFAMILY SSF48452 115 246 2.78E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_06060 249ab8f5183b4907c251264115a25384 284 Gene3D G3DSA:1.25.40.10 197 284 3.0E-24 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_05515 9ca77bf3202a240b7bfc7e98d19b4337 373 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 324 348 - T 12-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M634_05515 9ca77bf3202a240b7bfc7e98d19b4337 373 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 367 3.0E-135 T 12-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M634_05515 9ca77bf3202a240b7bfc7e98d19b4337 373 Pfam PF01098 Cell cycle protein 24 367 1.2E-113 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M634_05515 9ca77bf3202a240b7bfc7e98d19b4337 373 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 16 369 28.134 T 12-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M634_18955 08db846d72424351d4733eb932c27173 142 SUPERFAMILY SSF50630 6 140 1.61E-42 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily M634_18955 08db846d72424351d4733eb932c27173 142 Pfam PF05618 Putative ATP-dependant zinc protease 6 138 6.6E-34 T 12-10-2018 M634_18955 08db846d72424351d4733eb932c27173 142 Gene3D G3DSA:2.40.70.10 3 133 8.4E-34 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily M634_02005 e1d0c67260555257e3f8ccdc573b1186 200 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 M634_02005 e1d0c67260555257e3f8ccdc573b1186 200 Pfam PF01323 DSBA-like thioredoxin domain 41 189 3.0E-29 T 12-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 M634_02005 e1d0c67260555257e3f8ccdc573b1186 200 SUPERFAMILY SSF52833 20 197 1.6E-44 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M634_02005 e1d0c67260555257e3f8ccdc573b1186 200 Gene3D G3DSA:3.40.30.10 17 200 4.3E-55 T 12-10-2018 M634_02005 e1d0c67260555257e3f8ccdc573b1186 200 PIRSF PIRSF001488 1 200 1.6E-70 T 12-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL M634_14985 26e4a4dc30749f9a97da5058cd884e4e 295 PIRSF PIRSF006250 16 295 2.1E-101 T 12-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 M634_14985 26e4a4dc30749f9a97da5058cd884e4e 295 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 41 127 1.1E-27 T 12-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 M634_14985 26e4a4dc30749f9a97da5058cd884e4e 295 Gene3D G3DSA:3.20.20.70 138 284 1.5E-126 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_14985 26e4a4dc30749f9a97da5058cd884e4e 295 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 130 293 1.0E-57 T 12-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 M634_14985 26e4a4dc30749f9a97da5058cd884e4e 295 SUPERFAMILY SSF51690 130 294 1.22E-59 T 12-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 M634_14985 26e4a4dc30749f9a97da5058cd884e4e 295 SUPERFAMILY SSF54675 15 128 1.96E-33 T 12-10-2018 M634_14985 26e4a4dc30749f9a97da5058cd884e4e 295 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 26 294 5.1E-95 T 12-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 M634_14985 26e4a4dc30749f9a97da5058cd884e4e 295 Gene3D G3DSA:3.90.1170.20 21 293 1.5E-126 T 12-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 M634_20435 8ef67e9f60519f448016bc183c367570 216 SUPERFAMILY SSF46785 90 173 4.35E-28 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_20435 8ef67e9f60519f448016bc183c367570 216 SUPERFAMILY SSF46785 2 84 8.71E-32 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_20435 8ef67e9f60519f448016bc183c367570 216 Pfam PF04337 Protein of unknown function, DUF480 5 158 8.3E-66 T 12-10-2018 IPR007432 Protein of unknown function DUF480 M634_20435 8ef67e9f60519f448016bc183c367570 216 Gene3D G3DSA:1.10.10.10 1 90 1.3E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_20435 8ef67e9f60519f448016bc183c367570 216 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 216 35.766 T 12-10-2018 IPR007432 Protein of unknown function DUF480 M634_20435 8ef67e9f60519f448016bc183c367570 216 Gene3D G3DSA:1.10.10.10 95 175 5.6E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_08150 e2f2fe8ed8868b9ef3d1d635f9943411 595 Gene3D G3DSA:1.20.1560.10 1 335 4.8E-52 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M634_08150 e2f2fe8ed8868b9ef3d1d635f9943411 595 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_08150 e2f2fe8ed8868b9ef3d1d635f9943411 595 SUPERFAMILY SSF90123 5 331 1.07E-58 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M634_08150 e2f2fe8ed8868b9ef3d1d635f9943411 595 Pfam PF00005 ABC transporter 369 512 3.0E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_08150 e2f2fe8ed8868b9ef3d1d635f9943411 595 Gene3D G3DSA:3.40.50.300 343 593 7.4E-64 T 12-10-2018 M634_08150 e2f2fe8ed8868b9ef3d1d635f9943411 595 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 20 554 7.2E-178 T 12-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 M634_08150 e2f2fe8ed8868b9ef3d1d635f9943411 595 Pfam PF00664 ABC transporter transmembrane region 24 292 5.1E-43 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 M634_08150 e2f2fe8ed8868b9ef3d1d635f9943411 595 SMART SM00382 375 594 9.1E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_08150 e2f2fe8ed8868b9ef3d1d635f9943411 595 SUPERFAMILY SSF52540 348 580 2.51E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_13825 0e015b9f7c5099528c2625638f4d3785 215 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 192 7.3E-77 T 12-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 M634_13825 0e015b9f7c5099528c2625638f4d3785 215 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 12-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 M634_13825 0e015b9f7c5099528c2625638f4d3785 215 SUPERFAMILY SSF53328 2 202 7.72E-66 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 M634_13825 0e015b9f7c5099528c2625638f4d3785 215 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 30.597 T 12-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 M634_13825 0e015b9f7c5099528c2625638f4d3785 215 Pfam PF00551 Formyl transferase 2 181 8.4E-62 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 M634_13825 0e015b9f7c5099528c2625638f4d3785 215 Gene3D G3DSA:3.40.50.170 2 213 8.7E-84 T 12-10-2018 M634_20340 559f689d37e02ecb648b6385b14cda6d 212 Gene3D G3DSA:1.10.3210.50 3 212 1.4E-68 T 12-10-2018 M634_20340 559f689d37e02ecb648b6385b14cda6d 212 Pfam PF01966 HD domain 27 129 4.7E-14 T 12-10-2018 IPR006674 HD domain M634_20340 559f689d37e02ecb648b6385b14cda6d 212 SMART SM00471 22 139 5.1E-7 T 12-10-2018 IPR003607 HD/PDEase domain M634_20340 559f689d37e02ecb648b6385b14cda6d 212 SUPERFAMILY SSF109604 7 210 1.91E-61 T 12-10-2018 M634_14345 1afa6b5f51ded8ab19c260d056dab3c4 110 Gene3D G3DSA:2.40.50.140 1 110 1.7E-38 T 12-10-2018 M634_14345 1afa6b5f51ded8ab19c260d056dab3c4 110 Pfam PF01588 Putative tRNA binding domain 14 107 5.6E-30 T 12-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 M634_14345 1afa6b5f51ded8ab19c260d056dab3c4 110 SUPERFAMILY SSF50249 8 109 2.69E-32 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_06035 807a13228d427952f5fb6a3e026d2d67 259 Gene3D G3DSA:3.40.50.300 1 258 1.2E-27 T 12-10-2018 M634_06035 807a13228d427952f5fb6a3e026d2d67 259 SUPERFAMILY SSF52540 1 250 1.52E-23 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_06035 807a13228d427952f5fb6a3e026d2d67 259 Pfam PF06564 Cellulose biosynthesis protein BcsQ 1 249 1.3E-45 T 12-10-2018 IPR017746 Cellulose synthase operon protein BcsQ M634_06035 807a13228d427952f5fb6a3e026d2d67 259 TIGRFAM TIGR03371 cellulose_yhjQ: cellulose synthase operon protein YhjQ 1 252 9.3E-69 T 12-10-2018 IPR017746 Cellulose synthase operon protein BcsQ M634_01320 fe34e575a141c30514ee20e46659e7da 194 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 6 189 8.2E-30 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 M634_01320 fe34e575a141c30514ee20e46659e7da 194 Pfam PF01914 MarC family integral membrane protein 3 192 1.8E-54 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 M634_14135 c93ab0174b591ae458734a543147fd9d 261 PIRSF PIRSF009437 1 261 8.4E-104 T 12-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 M634_14135 c93ab0174b591ae458734a543147fd9d 261 SMART SM00900 148 246 8.7E-32 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 M634_14135 c93ab0174b591ae458734a543147fd9d 261 Pfam PF04205 FMN-binding domain 148 243 6.6E-14 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 M634_14135 c93ab0174b591ae458734a543147fd9d 261 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 6 258 35.403 T 12-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 M634_14135 c93ab0174b591ae458734a543147fd9d 261 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 5 254 3.6E-96 T 12-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 M634_22545 f34c1fd0850b625fe57211805ac3db05 484 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 386 477 8.3E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_22545 f34c1fd0850b625fe57211805ac3db05 484 SMART SM00388 276 343 5.0E-5 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_22545 f34c1fd0850b625fe57211805ac3db05 484 SUPERFAMILY SSF47384 271 340 8.83E-7 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M634_22545 f34c1fd0850b625fe57211805ac3db05 484 Pfam PF11884 Domain of unknown function (DUF3404) 17 275 4.7E-112 T 12-10-2018 IPR021821 Protein of unknown function DUF3404 M634_22545 f34c1fd0850b625fe57211805ac3db05 484 SUPERFAMILY SSF55874 347 479 2.75E-17 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_22545 f34c1fd0850b625fe57211805ac3db05 484 Gene3D G3DSA:1.10.287.130 283 340 6.4E-17 T 12-10-2018 M634_22545 f34c1fd0850b625fe57211805ac3db05 484 Gene3D G3DSA:3.30.565.10 341 476 6.4E-17 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_22545 f34c1fd0850b625fe57211805ac3db05 484 Pfam PF00512 His Kinase A (phospho-acceptor) domain 281 332 2.6E-6 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_22545 f34c1fd0850b625fe57211805ac3db05 484 SMART SM00387 381 479 2.4E-10 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_10440 d2e84e281bc2087d4b9592a23df28834 461 Gene3D G3DSA:3.40.350.10 59 220 2.9E-15 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal M634_10440 d2e84e281bc2087d4b9592a23df28834 461 SUPERFAMILY SSF53092 52 218 1.5E-12 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal M634_10440 d2e84e281bc2087d4b9592a23df28834 461 Pfam PF00557 Metallopeptidase family M24 228 439 9.7E-30 T 12-10-2018 IPR000994 Peptidase M24 M634_10440 d2e84e281bc2087d4b9592a23df28834 461 Pfam PF01321 Creatinase/Prolidase N-terminal domain 62 220 1.8E-9 T 12-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 M634_10440 d2e84e281bc2087d4b9592a23df28834 461 SUPERFAMILY SSF55920 218 453 5.63E-41 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like M634_10440 d2e84e281bc2087d4b9592a23df28834 461 Gene3D G3DSA:3.90.230.10 221 453 1.2E-38 T 12-10-2018 M634_24295 7aca6bfe9df178a2438c5ecba20bfbbd 1172 Gene3D G3DSA:3.30.870.10 1000 1156 7.1E-11 T 12-10-2018 M634_24295 7aca6bfe9df178a2438c5ecba20bfbbd 1172 Pfam PF13086 AAA domain 272 467 1.3E-8 T 12-10-2018 M634_24295 7aca6bfe9df178a2438c5ecba20bfbbd 1172 PIRSF PIRSF026306 1 1166 0.0 T 12-10-2018 IPR016834 Uncharacterised conserved protein UCP026306 M634_24295 7aca6bfe9df178a2438c5ecba20bfbbd 1172 Pfam PF13091 PLD-like domain 1022 1143 1.2E-7 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 M634_24295 7aca6bfe9df178a2438c5ecba20bfbbd 1172 SUPERFAMILY SSF56024 1007 1150 3.77E-14 T 12-10-2018 M634_24295 7aca6bfe9df178a2438c5ecba20bfbbd 1172 Gene3D G3DSA:3.40.50.300 796 991 3.2E-29 T 12-10-2018 M634_24295 7aca6bfe9df178a2438c5ecba20bfbbd 1172 SUPERFAMILY SSF52540 266 971 3.16E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_24295 7aca6bfe9df178a2438c5ecba20bfbbd 1172 Pfam PF13087 AAA domain 786 963 9.1E-22 T 12-10-2018 M634_20330 9a45324983ae75c2ee76f4eb885acd57 617 Pfam PF01553 Acyltransferase 435 563 3.5E-25 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 M634_20330 9a45324983ae75c2ee76f4eb885acd57 617 SMART SM00563 450 566 1.0E-30 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 M634_20330 9a45324983ae75c2ee76f4eb885acd57 617 SUPERFAMILY SSF103473 7 420 1.05E-24 T 12-10-2018 IPR036259 MFS transporter superfamily M634_20330 9a45324983ae75c2ee76f4eb885acd57 617 SUPERFAMILY SSF69593 381 613 1.31E-31 T 12-10-2018 M634_20330 9a45324983ae75c2ee76f4eb885acd57 617 Pfam PF07690 Major Facilitator Superfamily 40 377 7.5E-14 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M634_20330 9a45324983ae75c2ee76f4eb885acd57 617 Gene3D G3DSA:1.20.1250.20 6 415 8.4E-23 T 12-10-2018 M634_01890 9bdc5b1c370c96c2b7181daf008e9df4 293 SUPERFAMILY SSF110849 40 132 6.54E-27 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily M634_01890 9bdc5b1c370c96c2b7181daf008e9df4 293 Pfam PF02195 ParB-like nuclease domain 40 130 1.4E-28 T 12-10-2018 IPR003115 ParB/Sulfiredoxin M634_01890 9bdc5b1c370c96c2b7181daf008e9df4 293 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 37 213 2.8E-57 T 12-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 M634_01890 9bdc5b1c370c96c2b7181daf008e9df4 293 Gene3D G3DSA:1.10.10.2830 117 230 1.3E-34 T 12-10-2018 M634_01890 9bdc5b1c370c96c2b7181daf008e9df4 293 SMART SM00470 40 130 2.3E-35 T 12-10-2018 IPR003115 ParB/Sulfiredoxin M634_01890 9bdc5b1c370c96c2b7181daf008e9df4 293 SUPERFAMILY SSF109709 122 229 4.71E-33 T 12-10-2018 M634_01890 9bdc5b1c370c96c2b7181daf008e9df4 293 Gene3D G3DSA:3.90.1530.30 53 116 2.5E-26 T 12-10-2018 M634_13590 fc5181b521cd6171871ed345ab7d2fac 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 5.6E-17 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 M634_13590 fc5181b521cd6171871ed345ab7d2fac 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 5.6E-17 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 M634_13590 fc5181b521cd6171871ed345ab7d2fac 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 5.6E-17 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 M634_13590 fc5181b521cd6171871ed345ab7d2fac 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 1.2E-32 T 12-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 M634_13590 fc5181b521cd6171871ed345ab7d2fac 89 PIRSF PIRSF004669 1 89 1.2E-29 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 M634_13590 fc5181b521cd6171871ed345ab7d2fac 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 2.5E-28 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 M634_17700 ca5c25861102336a4a69935c1c834ebd 402 PRINTS PR01035 Tetracycline resistance protein signature 135 157 1.1E-5 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 M634_17700 ca5c25861102336a4a69935c1c834ebd 402 PRINTS PR01035 Tetracycline resistance protein signature 19 35 1.1E-5 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 M634_17700 ca5c25861102336a4a69935c1c834ebd 402 PRINTS PR01035 Tetracycline resistance protein signature 303 323 1.1E-5 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 M634_17700 ca5c25861102336a4a69935c1c834ebd 402 SUPERFAMILY SSF103473 2 387 3.14E-58 T 12-10-2018 IPR036259 MFS transporter superfamily M634_17700 ca5c25861102336a4a69935c1c834ebd 402 Pfam PF07690 Major Facilitator Superfamily 15 346 2.0E-43 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M634_17700 ca5c25861102336a4a69935c1c834ebd 402 Gene3D G3DSA:1.20.1720.10 9 383 1.0E-80 T 12-10-2018 M634_17230 78907c28d63712e979548b50af1e1e6f 285 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 12-10-2018 IPR000540 Flagellar motor protein MotA, conserved site M634_17230 78907c28d63712e979548b50af1e1e6f 285 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 281 5.6E-116 T 12-10-2018 IPR022522 Flagellar motor stator, MotA M634_17230 78907c28d63712e979548b50af1e1e6f 285 Pfam PF01618 MotA/TolQ/ExbB proton channel family 134 238 7.8E-9 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel M634_23730 c63b2ac323f43640be8f91b341ed11c6 653 SMART SM00304 322 375 2.2E-5 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_23730 c63b2ac323f43640be8f91b341ed11c6 653 Pfam PF12729 Four helix bundle sensory module for signal transduction 2 149 2.3E-8 T 12-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain M634_23730 c63b2ac323f43640be8f91b341ed11c6 653 SUPERFAMILY SSF58104 348 652 6.28E-67 T 12-10-2018 M634_23730 c63b2ac323f43640be8f91b341ed11c6 653 SMART SM00283 390 651 6.2E-63 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_23730 c63b2ac323f43640be8f91b341ed11c6 653 Gene3D G3DSA:1.10.287.950 322 653 1.1E-65 T 12-10-2018 M634_23730 c63b2ac323f43640be8f91b341ed11c6 653 Pfam PF00672 HAMP domain 324 366 2.5E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_23730 c63b2ac323f43640be8f91b341ed11c6 653 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 455 617 1.4E-42 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_02580 a0132f8b6521e267a6fb63449f8b1fe9 848 Pfam PF00563 EAL domain 600 834 2.1E-65 T 12-10-2018 IPR001633 EAL domain M634_02580 a0132f8b6521e267a6fb63449f8b1fe9 848 Pfam PF00672 HAMP domain 369 417 2.4E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_02580 a0132f8b6521e267a6fb63449f8b1fe9 848 SUPERFAMILY SSF141868 600 846 3.66E-78 T 12-10-2018 IPR035919 EAL domain superfamily M634_02580 a0132f8b6521e267a6fb63449f8b1fe9 848 Gene3D G3DSA:3.30.70.270 428 594 2.3E-34 T 12-10-2018 M634_02580 a0132f8b6521e267a6fb63449f8b1fe9 848 Gene3D G3DSA:3.30.450.20 146 219 2.6E-18 T 12-10-2018 M634_02580 a0132f8b6521e267a6fb63449f8b1fe9 848 SMART SM00267 416 582 1.6E-30 T 12-10-2018 IPR000160 GGDEF domain M634_02580 a0132f8b6521e267a6fb63449f8b1fe9 848 SMART SM00052 592 839 1.3E-93 T 12-10-2018 IPR001633 EAL domain M634_02580 a0132f8b6521e267a6fb63449f8b1fe9 848 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 426 573 3.7E-24 T 12-10-2018 IPR000160 GGDEF domain M634_02580 a0132f8b6521e267a6fb63449f8b1fe9 848 Pfam PF00990 Diguanylate cyclase, GGDEF domain 428 574 1.3E-28 T 12-10-2018 IPR000160 GGDEF domain M634_02580 a0132f8b6521e267a6fb63449f8b1fe9 848 SMART SM00304 368 421 1.1E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_02580 a0132f8b6521e267a6fb63449f8b1fe9 848 SUPERFAMILY SSF158472 369 418 2.48E-8 T 12-10-2018 M634_02580 a0132f8b6521e267a6fb63449f8b1fe9 848 Gene3D G3DSA:3.30.450.20 220 334 2.6E-18 T 12-10-2018 M634_02580 a0132f8b6521e267a6fb63449f8b1fe9 848 Gene3D G3DSA:3.20.20.450 595 847 2.0E-84 T 12-10-2018 IPR035919 EAL domain superfamily M634_02580 a0132f8b6521e267a6fb63449f8b1fe9 848 Pfam PF02743 Cache domain 47 264 9.2E-24 T 12-10-2018 IPR033479 Double Cache domain 1 M634_02580 a0132f8b6521e267a6fb63449f8b1fe9 848 Gene3D G3DSA:1.20.1480.50 335 427 6.2E-11 T 12-10-2018 M634_02580 a0132f8b6521e267a6fb63449f8b1fe9 848 SUPERFAMILY SSF55073 432 584 1.96E-32 T 12-10-2018 IPR029787 Nucleotide cyclase M634_23480 297d8771fb486bfd691f76961064ef04 292 Pfam PF00892 EamA-like transporter family 10 138 9.6E-12 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M634_23480 297d8771fb486bfd691f76961064ef04 292 Pfam PF00892 EamA-like transporter family 150 279 2.5E-17 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M634_23480 297d8771fb486bfd691f76961064ef04 292 SUPERFAMILY SSF103481 188 285 5.75E-16 T 12-10-2018 M634_23480 297d8771fb486bfd691f76961064ef04 292 SUPERFAMILY SSF103481 41 143 3.27E-10 T 12-10-2018 M634_13935 ee375862b82e97470f83f951f5cf0d7d 343 Gene3D G3DSA:2.160.10.10 100 308 8.1E-63 T 12-10-2018 M634_13935 ee375862b82e97470f83f951f5cf0d7d 343 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 2.2E-115 T 12-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 M634_13935 ee375862b82e97470f83f951f5cf0d7d 343 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 5 326 34.646 T 12-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 M634_13935 ee375862b82e97470f83f951f5cf0d7d 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 201 233 0.15 T 12-10-2018 IPR001451 Hexapeptide repeat M634_13935 ee375862b82e97470f83f951f5cf0d7d 343 SUPERFAMILY SSF51161 32 316 3.5E-84 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily M634_13935 ee375862b82e97470f83f951f5cf0d7d 343 Gene3D G3DSA:3.40.1390.10 1 99 1.4E-31 T 12-10-2018 M634_13935 ee375862b82e97470f83f951f5cf0d7d 343 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 23 88 5.4E-23 T 12-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 M634_13935 ee375862b82e97470f83f951f5cf0d7d 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 144 1.8E-9 T 12-10-2018 IPR001451 Hexapeptide repeat M634_13935 ee375862b82e97470f83f951f5cf0d7d 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 179 1.6E-7 T 12-10-2018 IPR001451 Hexapeptide repeat M634_18165 12c9a0a0673234e5c78abbe205a4562f 351 SUPERFAMILY SSF56935 25 349 1.68E-39 T 12-10-2018 M634_18165 12c9a0a0673234e5c78abbe205a4562f 351 Gene3D G3DSA:2.40.160.10 21 350 5.5E-33 T 12-10-2018 IPR023614 Porin domain superfamily M634_12915 b40da2f4080842dbf23d182761ec95f0 302 SUPERFAMILY SSF52768 2 288 3.17E-82 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily M634_12915 b40da2f4080842dbf23d182761ec95f0 302 Gene3D G3DSA:3.40.800.20 2 298 6.1E-67 T 12-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 M634_12915 b40da2f4080842dbf23d182761ec95f0 302 Pfam PF00850 Histone deacetylase domain 26 282 1.5E-50 T 12-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 M634_12915 b40da2f4080842dbf23d182761ec95f0 302 PRINTS PR01270 Histone deacetylase superfamily signature 151 166 4.6E-17 T 12-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 M634_12915 b40da2f4080842dbf23d182761ec95f0 302 PRINTS PR01270 Histone deacetylase superfamily signature 225 235 4.6E-17 T 12-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 M634_12915 b40da2f4080842dbf23d182761ec95f0 302 PRINTS PR01270 Histone deacetylase superfamily signature 117 140 4.6E-17 T 12-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 M634_06185 382c19062eab2660429cb5f9e682eaae 177 Pfam PF00258 Flavodoxin 6 162 2.0E-32 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 M634_06185 382c19062eab2660429cb5f9e682eaae 177 TIGRFAM TIGR01752 flav_long: flavodoxin 4 170 1.1E-70 T 12-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 M634_06185 382c19062eab2660429cb5f9e682eaae 177 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 12-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 M634_06185 382c19062eab2660429cb5f9e682eaae 177 PIRSF PIRSF038996 1 174 2.4E-66 T 12-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 M634_06185 382c19062eab2660429cb5f9e682eaae 177 SUPERFAMILY SSF52218 4 172 7.14E-51 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M634_06185 382c19062eab2660429cb5f9e682eaae 177 Gene3D G3DSA:3.40.50.360 3 176 4.4E-55 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M634_03955 953460599fe439df770e953bb2435851 353 Pfam PF00814 Glycoprotease family 39 322 4.1E-103 T 12-10-2018 IPR000905 Gcp-like domain M634_03955 953460599fe439df770e953bb2435851 353 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 20 321 2.9E-123 T 12-10-2018 IPR017861 Kae1/TsaD family M634_03955 953460599fe439df770e953bb2435851 353 ProSitePatterns PS01016 Glycoprotease family signature. 111 131 - T 12-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 M634_03955 953460599fe439df770e953bb2435851 353 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 16 346 63.787 T 12-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 M634_03955 953460599fe439df770e953bb2435851 353 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 146 158 8.8E-50 T 12-10-2018 IPR017861 Kae1/TsaD family M634_03955 953460599fe439df770e953bb2435851 353 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 19 32 8.8E-50 T 12-10-2018 IPR017861 Kae1/TsaD family M634_03955 953460599fe439df770e953bb2435851 353 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 91 111 8.8E-50 T 12-10-2018 IPR017861 Kae1/TsaD family M634_03955 953460599fe439df770e953bb2435851 353 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 278 287 8.8E-50 T 12-10-2018 IPR017861 Kae1/TsaD family M634_03955 953460599fe439df770e953bb2435851 353 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 169 190 8.8E-50 T 12-10-2018 IPR017861 Kae1/TsaD family M634_03955 953460599fe439df770e953bb2435851 353 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 112 131 8.8E-50 T 12-10-2018 IPR017861 Kae1/TsaD family M634_03955 953460599fe439df770e953bb2435851 353 SUPERFAMILY SSF53067 15 326 2.16E-43 T 12-10-2018 M634_03955 953460599fe439df770e953bb2435851 353 Gene3D G3DSA:3.30.420.40 144 308 1.1E-130 T 12-10-2018 M634_03955 953460599fe439df770e953bb2435851 353 Gene3D G3DSA:3.30.420.40 18 330 1.1E-130 T 12-10-2018 M634_03955 953460599fe439df770e953bb2435851 353 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 18 328 1.5E-133 T 12-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 M634_08125 4894f143ab56dc402eff81b2974880e4 658 SUPERFAMILY SSF51206 213 323 1.44E-20 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like M634_08125 4894f143ab56dc402eff81b2974880e4 658 Gene3D G3DSA:3.40.50.2300 11 152 1.6E-7 T 12-10-2018 M634_08125 4894f143ab56dc402eff81b2974880e4 658 SUPERFAMILY SSF52172 12 141 3.65E-6 T 12-10-2018 IPR011006 CheY-like superfamily M634_08125 4894f143ab56dc402eff81b2974880e4 658 Gene3D G3DSA:3.30.565.10 501 651 8.6E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_08125 4894f143ab56dc402eff81b2974880e4 658 Pfam PF00512 His Kinase A (phospho-acceptor) domain 352 380 1.0E-6 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_08125 4894f143ab56dc402eff81b2974880e4 658 PRINTS PR00344 Bacterial sensor protein C-terminal signature 581 595 1.1E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_08125 4894f143ab56dc402eff81b2974880e4 658 PRINTS PR00344 Bacterial sensor protein C-terminal signature 599 609 1.1E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_08125 4894f143ab56dc402eff81b2974880e4 658 PRINTS PR00344 Bacterial sensor protein C-terminal signature 613 631 1.1E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_08125 4894f143ab56dc402eff81b2974880e4 658 PRINTS PR00344 Bacterial sensor protein C-terminal signature 637 650 1.1E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_08125 4894f143ab56dc402eff81b2974880e4 658 Pfam PF00027 Cyclic nucleotide-binding domain 214 301 1.9E-16 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain M634_08125 4894f143ab56dc402eff81b2974880e4 658 SMART SM00387 540 653 7.6E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_08125 4894f143ab56dc402eff81b2974880e4 658 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 542 650 9.4E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_08125 4894f143ab56dc402eff81b2974880e4 658 SUPERFAMILY SSF47384 347 386 1.16E-6 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M634_08125 4894f143ab56dc402eff81b2974880e4 658 Gene3D G3DSA:2.60.120.10 186 330 1.8E-18 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M634_08125 4894f143ab56dc402eff81b2974880e4 658 SUPERFAMILY SSF55874 492 651 1.57E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_08125 4894f143ab56dc402eff81b2974880e4 658 SMART SM00100 188 313 0.0017 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain M634_19620 bb663080adaf729201308b0de7ad8db7 521 Gene3D G3DSA:3.90.780.10 335 518 1.0E-43 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_19620 bb663080adaf729201308b0de7ad8db7 521 Pfam PF00149 Calcineurin-like phosphoesterase 32 257 1.4E-11 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 M634_19620 bb663080adaf729201308b0de7ad8db7 521 SUPERFAMILY SSF55816 333 517 1.44E-50 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_19620 bb663080adaf729201308b0de7ad8db7 521 PRINTS PR01607 Apyrase family signature 272 292 4.6E-20 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_19620 bb663080adaf729201308b0de7ad8db7 521 PRINTS PR01607 Apyrase family signature 455 474 4.6E-20 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_19620 bb663080adaf729201308b0de7ad8db7 521 PRINTS PR01607 Apyrase family signature 386 409 4.6E-20 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_19620 bb663080adaf729201308b0de7ad8db7 521 PRINTS PR01607 Apyrase family signature 29 47 4.6E-20 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_19620 bb663080adaf729201308b0de7ad8db7 521 PRINTS PR01607 Apyrase family signature 242 265 4.6E-20 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_19620 bb663080adaf729201308b0de7ad8db7 521 SUPERFAMILY SSF56300 26 334 6.12E-68 T 12-10-2018 M634_19620 bb663080adaf729201308b0de7ad8db7 521 Gene3D G3DSA:3.60.21.10 26 334 5.3E-81 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like M634_19620 bb663080adaf729201308b0de7ad8db7 521 Pfam PF02872 5'-nucleotidase, C-terminal domain 342 481 2.3E-42 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_01885 625359bdc1ecc30e97ba780b77e29dd9 257 PIRSF PIRSF009320 2 52 8.1E-14 T 12-10-2018 M634_01885 625359bdc1ecc30e97ba780b77e29dd9 257 PIRSF PIRSF009320 88 251 1.2E-9 T 12-10-2018 M634_01885 625359bdc1ecc30e97ba780b77e29dd9 257 Pfam PF13614 AAA domain 2 178 3.6E-62 T 12-10-2018 IPR025669 AAA domain M634_01885 625359bdc1ecc30e97ba780b77e29dd9 257 SUPERFAMILY SSF52540 2 254 4.12E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_01885 625359bdc1ecc30e97ba780b77e29dd9 257 Gene3D G3DSA:3.40.50.300 1 255 2.0E-76 T 12-10-2018 M634_00880 59a2134ba38d13b69c91e8e3ad6510e7 1143 Gene3D G3DSA:3.30.450.20 616 745 2.7E-11 T 12-10-2018 M634_00880 59a2134ba38d13b69c91e8e3ad6510e7 1143 SMART SM00448 1026 1139 1.1E-16 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_00880 59a2134ba38d13b69c91e8e3ad6510e7 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 966 984 1.3E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_00880 59a2134ba38d13b69c91e8e3ad6510e7 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 933 947 1.3E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_00880 59a2134ba38d13b69c91e8e3ad6510e7 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 990 1003 1.3E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_00880 59a2134ba38d13b69c91e8e3ad6510e7 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 951 961 1.3E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_00880 59a2134ba38d13b69c91e8e3ad6510e7 1143 Pfam PF12860 PAS fold 634 748 1.0E-43 T 12-10-2018 M634_00880 59a2134ba38d13b69c91e8e3ad6510e7 1143 SUPERFAMILY SSF55874 843 1002 7.6E-38 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_00880 59a2134ba38d13b69c91e8e3ad6510e7 1143 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 898 1004 4.3E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_00880 59a2134ba38d13b69c91e8e3ad6510e7 1143 Gene3D G3DSA:3.40.50.2300 1011 1143 6.0E-18 T 12-10-2018 M634_00880 59a2134ba38d13b69c91e8e3ad6510e7 1143 Gene3D G3DSA:3.30.565.10 852 1007 4.8E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_00880 59a2134ba38d13b69c91e8e3ad6510e7 1143 SUPERFAMILY SSF52172 1026 1142 1.07E-19 T 12-10-2018 IPR011006 CheY-like superfamily M634_00880 59a2134ba38d13b69c91e8e3ad6510e7 1143 SUPERFAMILY SSF47384 774 854 2.75E-13 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M634_00880 59a2134ba38d13b69c91e8e3ad6510e7 1143 Gene3D G3DSA:1.10.287.130 746 851 2.1E-14 T 12-10-2018 M634_00880 59a2134ba38d13b69c91e8e3ad6510e7 1143 Gene3D G3DSA:1.20.1730.10 34 509 5.6E-8 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily M634_00880 59a2134ba38d13b69c91e8e3ad6510e7 1143 Pfam PF00072 Response regulator receiver domain 1028 1139 3.1E-12 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_00880 59a2134ba38d13b69c91e8e3ad6510e7 1143 SUPERFAMILY SSF55785 626 741 1.74E-8 T 12-10-2018 IPR035965 PAS domain superfamily M634_00880 59a2134ba38d13b69c91e8e3ad6510e7 1143 SMART SM00388 788 853 8.0E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_00880 59a2134ba38d13b69c91e8e3ad6510e7 1143 Pfam PF00512 His Kinase A (phospho-acceptor) domain 788 853 2.9E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_00880 59a2134ba38d13b69c91e8e3ad6510e7 1143 SMART SM00387 897 1006 5.0E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_23625 f023e441748b1dd72e86d4c429a59273 416 SMART SM00487 27 232 7.0E-57 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M634_23625 f023e441748b1dd72e86d4c429a59273 416 Pfam PF00271 Helicase conserved C-terminal domain 241 348 3.0E-29 T 12-10-2018 IPR001650 Helicase, C-terminal M634_23625 f023e441748b1dd72e86d4c429a59273 416 Gene3D G3DSA:3.40.50.300 222 393 3.7E-47 T 12-10-2018 M634_23625 f023e441748b1dd72e86d4c429a59273 416 Pfam PF00270 DEAD/DEAH box helicase 32 206 6.8E-49 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 M634_23625 f023e441748b1dd72e86d4c429a59273 416 Gene3D G3DSA:3.40.50.300 2 221 1.2E-74 T 12-10-2018 M634_23625 f023e441748b1dd72e86d4c429a59273 416 SMART SM00490 267 348 1.1E-32 T 12-10-2018 IPR001650 Helicase, C-terminal M634_23625 f023e441748b1dd72e86d4c429a59273 416 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 164 172 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site M634_23625 f023e441748b1dd72e86d4c429a59273 416 SUPERFAMILY SSF52540 86 370 1.98E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_13660 ff9905b49b116abcb7862a3fa4d90ea2 343 Pfam PF13188 PAS domain 18 72 3.6E-6 T 12-10-2018 IPR000014 PAS domain M634_13660 ff9905b49b116abcb7862a3fa4d90ea2 343 SMART SM00387 231 337 5.9E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_13660 ff9905b49b116abcb7862a3fa4d90ea2 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 268 282 8.4E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_13660 ff9905b49b116abcb7862a3fa4d90ea2 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 286 296 8.4E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_13660 ff9905b49b116abcb7862a3fa4d90ea2 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 321 334 8.4E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_13660 ff9905b49b116abcb7862a3fa4d90ea2 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 297 315 8.4E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_13660 ff9905b49b116abcb7862a3fa4d90ea2 343 Gene3D G3DSA:3.30.565.10 190 342 1.8E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_13660 ff9905b49b116abcb7862a3fa4d90ea2 343 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 336 1.2E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_13660 ff9905b49b116abcb7862a3fa4d90ea2 343 Gene3D G3DSA:1.10.287.130 105 185 2.8E-9 T 12-10-2018 M634_13660 ff9905b49b116abcb7862a3fa4d90ea2 343 SUPERFAMILY SSF55785 18 85 2.62E-6 T 12-10-2018 IPR035965 PAS domain superfamily M634_13660 ff9905b49b116abcb7862a3fa4d90ea2 343 SMART SM00388 122 188 1.4E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_13660 ff9905b49b116abcb7862a3fa4d90ea2 343 SUPERFAMILY SSF47384 111 188 2.94E-10 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M634_13660 ff9905b49b116abcb7862a3fa4d90ea2 343 Pfam PF00512 His Kinase A (phospho-acceptor) domain 122 186 1.3E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_13660 ff9905b49b116abcb7862a3fa4d90ea2 343 SUPERFAMILY SSF55874 177 336 3.54E-36 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_04425 c5fe342e5bc3b7db22e7559bd294868a 172 TIGRFAM TIGR01752 flav_long: flavodoxin 2 168 2.4E-69 T 12-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 M634_04425 c5fe342e5bc3b7db22e7559bd294868a 172 Gene3D G3DSA:3.40.50.360 1 172 1.4E-50 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M634_04425 c5fe342e5bc3b7db22e7559bd294868a 172 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 12-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 M634_04425 c5fe342e5bc3b7db22e7559bd294868a 172 Pfam PF00258 Flavodoxin 5 160 2.2E-28 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 M634_04425 c5fe342e5bc3b7db22e7559bd294868a 172 SUPERFAMILY SSF52218 1 167 9.56E-49 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M634_04425 c5fe342e5bc3b7db22e7559bd294868a 172 PIRSF PIRSF038996 1 171 7.1E-60 T 12-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 M634_12470 fa7d2a0101ba3800e2c70d69776052ab 245 SUPERFAMILY SSF51735 5 244 6.1E-87 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_12470 fa7d2a0101ba3800e2c70d69776052ab 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 216 3.5E-5 T 12-10-2018 M634_12470 fa7d2a0101ba3800e2c70d69776052ab 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 M634_12470 fa7d2a0101ba3800e2c70d69776052ab 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 242 7.0E-67 T 12-10-2018 M634_12470 fa7d2a0101ba3800e2c70d69776052ab 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 8.6E-53 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_12470 fa7d2a0101ba3800e2c70d69776052ab 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 8.6E-53 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_12470 fa7d2a0101ba3800e2c70d69776052ab 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 8.6E-53 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_12470 fa7d2a0101ba3800e2c70d69776052ab 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 8.6E-53 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_12470 fa7d2a0101ba3800e2c70d69776052ab 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 8.6E-53 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_12470 fa7d2a0101ba3800e2c70d69776052ab 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 8.6E-53 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_12470 fa7d2a0101ba3800e2c70d69776052ab 245 Gene3D G3DSA:3.40.50.720 1 245 1.1E-88 T 12-10-2018 M634_12470 fa7d2a0101ba3800e2c70d69776052ab 245 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 9 243 4.9E-100 T 12-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 M634_12470 fa7d2a0101ba3800e2c70d69776052ab 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 5.6E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_12470 fa7d2a0101ba3800e2c70d69776052ab 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 5.6E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_12470 fa7d2a0101ba3800e2c70d69776052ab 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 5.6E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_13515 0fc3836204db696ab9fa613f1fe84f5c 205 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 203 1.9E-77 T 12-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 M634_13515 0fc3836204db696ab9fa613f1fe84f5c 205 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_13515 0fc3836204db696ab9fa613f1fe84f5c 205 Gene3D G3DSA:3.40.50.300 1 201 5.5E-42 T 12-10-2018 M634_13515 0fc3836204db696ab9fa613f1fe84f5c 205 Pfam PF00005 ABC transporter 18 158 6.0E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_13515 0fc3836204db696ab9fa613f1fe84f5c 205 SMART SM00382 26 205 9.8E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_13515 0fc3836204db696ab9fa613f1fe84f5c 205 SUPERFAMILY SSF52540 2 193 4.75E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_17175 0464053d4017beea948c7c5c5209f8a1 375 SUPERFAMILY SSF160544 244 351 7.59E-36 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal M634_17175 0464053d4017beea948c7c5c5209f8a1 375 Gene3D G3DSA:3.40.1690.10 217 358 2.7E-52 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal M634_17175 0464053d4017beea948c7c5c5209f8a1 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 6.0E-37 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 M634_17175 0464053d4017beea948c7c5c5209f8a1 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 6.0E-37 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 M634_17175 0464053d4017beea948c7c5c5209f8a1 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 6.0E-37 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 M634_17175 0464053d4017beea948c7c5c5209f8a1 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 6.0E-37 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 M634_17175 0464053d4017beea948c7c5c5209f8a1 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 6.0E-37 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 M634_17175 0464053d4017beea948c7c5c5209f8a1 375 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 352 1.9E-117 T 12-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 M634_17175 0464053d4017beea948c7c5c5209f8a1 375 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 5.1E-118 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 M634_12380 7cbbfab8d06e0a9435b25ac2e0108bd7 317 PIRSF PIRSF002867 1 313 1.7E-106 T 12-10-2018 IPR024181 Chemotaxis response regulator CheV M634_12380 7cbbfab8d06e0a9435b25ac2e0108bd7 317 SMART SM00260 17 158 9.8E-26 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 M634_12380 7cbbfab8d06e0a9435b25ac2e0108bd7 317 Pfam PF01584 CheW-like domain 21 160 1.7E-33 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 M634_12380 7cbbfab8d06e0a9435b25ac2e0108bd7 317 Gene3D G3DSA:3.40.50.2300 183 312 1.0E-20 T 12-10-2018 M634_12380 7cbbfab8d06e0a9435b25ac2e0108bd7 317 SMART SM00448 184 305 1.1E-12 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_12380 7cbbfab8d06e0a9435b25ac2e0108bd7 317 Gene3D G3DSA:2.30.30.40 24 152 2.9E-27 T 12-10-2018 M634_12380 7cbbfab8d06e0a9435b25ac2e0108bd7 317 Pfam PF00072 Response regulator receiver domain 186 303 5.8E-14 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_12380 7cbbfab8d06e0a9435b25ac2e0108bd7 317 SUPERFAMILY SSF50341 16 163 6.8E-33 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 M634_12380 7cbbfab8d06e0a9435b25ac2e0108bd7 317 SUPERFAMILY SSF52172 183 311 3.7E-21 T 12-10-2018 IPR011006 CheY-like superfamily M634_12380 7cbbfab8d06e0a9435b25ac2e0108bd7 317 Gene3D G3DSA:2.40.50.180 39 158 2.9E-27 T 12-10-2018 M634_07975 7aa74aeb63f557e245a6c3e50618ca26 583 SMART SM00490 265 344 1.1E-10 T 12-10-2018 IPR001650 Helicase, C-terminal M634_07975 7aa74aeb63f557e245a6c3e50618ca26 583 SUPERFAMILY SSF52540 48 360 3.53E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_07975 7aa74aeb63f557e245a6c3e50618ca26 583 Pfam PF04851 Type III restriction enzyme, res subunit 2 154 8.2E-24 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 M634_07975 7aa74aeb63f557e245a6c3e50618ca26 583 Pfam PF00271 Helicase conserved C-terminal domain 239 342 8.2E-14 T 12-10-2018 IPR001650 Helicase, C-terminal M634_07975 7aa74aeb63f557e245a6c3e50618ca26 583 Gene3D G3DSA:3.40.50.300 1 168 1.4E-29 T 12-10-2018 M634_07975 7aa74aeb63f557e245a6c3e50618ca26 583 SUPERFAMILY SSF57829 425 465 2.75E-6 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 M634_07975 7aa74aeb63f557e245a6c3e50618ca26 583 Gene3D G3DSA:3.40.50.300 209 368 1.3E-33 T 12-10-2018 M634_07975 7aa74aeb63f557e245a6c3e50618ca26 583 SMART SM00487 1 177 1.6E-14 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M634_19210 e815b5a39421c6bc0e27017522517a94 514 Gene3D G3DSA:1.10.10.1710 448 513 3.6E-25 T 12-10-2018 M634_19210 e815b5a39421c6bc0e27017522517a94 514 Gene3D G3DSA:1.25.40.80 132 323 1.8E-99 T 12-10-2018 M634_19210 e815b5a39421c6bc0e27017522517a94 514 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 7 223 5.6E-65 T 12-10-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein M634_19210 e815b5a39421c6bc0e27017522517a94 514 Gene3D G3DSA:1.10.579.10 327 447 5.6E-54 T 12-10-2018 M634_19210 e815b5a39421c6bc0e27017522517a94 514 Gene3D G3DSA:3.40.50.620 8 230 1.8E-99 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M634_19210 e815b5a39421c6bc0e27017522517a94 514 SUPERFAMILY SSF48173 229 500 2.49E-63 T 12-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 M634_21835 b34ea6dfd010851b7f6f64ac1fed5b7c 448 Pfam PF01769 Divalent cation transporter 319 440 4.7E-24 T 12-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 M634_21835 b34ea6dfd010851b7f6f64ac1fed5b7c 448 SUPERFAMILY SSF161093 280 447 9.55E-44 T 12-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 M634_21835 b34ea6dfd010851b7f6f64ac1fed5b7c 448 Pfam PF03448 MgtE intracellular N domain 38 138 1.2E-12 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain M634_21835 b34ea6dfd010851b7f6f64ac1fed5b7c 448 Gene3D G3DSA:1.10.357.20 274 447 4.7E-45 T 12-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain M634_21835 b34ea6dfd010851b7f6f64ac1fed5b7c 448 SMART SM00924 37 140 1.4E-4 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain M634_21835 b34ea6dfd010851b7f6f64ac1fed5b7c 448 SUPERFAMILY SSF158791 19 137 7.46E-11 T 12-10-2018 M634_15005 143330c671915d81f046d9081220a567 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 143 160 1.3E-29 T 12-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial M634_15005 143330c671915d81f046d9081220a567 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 201 211 1.3E-29 T 12-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial M634_15005 143330c671915d81f046d9081220a567 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 224 239 1.3E-29 T 12-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial M634_15005 143330c671915d81f046d9081220a567 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 212 223 1.3E-29 T 12-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial M634_15005 143330c671915d81f046d9081220a567 289 Gene3D G3DSA:1.20.120.1220 110 284 3.3E-5 T 12-10-2018 M634_15005 143330c671915d81f046d9081220a567 289 Pfam PF01478 Type IV leader peptidase family 135 244 2.2E-27 T 12-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 M634_15005 143330c671915d81f046d9081220a567 289 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 17 124 3.7E-33 T 12-10-2018 IPR010627 Peptidase A24A, N-terminal M634_08365 d15f2739bb2236d42ac972bc7da1c78a 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 3.5E-106 T 12-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 M634_08365 d15f2739bb2236d42ac972bc7da1c78a 327 SUPERFAMILY SSF55681 92 327 1.73E-82 T 12-10-2018 M634_08365 d15f2739bb2236d42ac972bc7da1c78a 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 2.1E-25 T 12-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 M634_08365 d15f2739bb2236d42ac972bc7da1c78a 327 SUPERFAMILY SSF46589 14 99 1.62E-22 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 M634_08365 d15f2739bb2236d42ac972bc7da1c78a 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 48.925 T 12-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 M634_08365 d15f2739bb2236d42ac972bc7da1c78a 327 Gene3D G3DSA:3.30.930.10 8 327 2.2E-126 T 12-10-2018 M634_08365 d15f2739bb2236d42ac972bc7da1c78a 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 327 2.8E-111 T 12-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 M634_09090 33852074a63751e3a9d4582006f9db41 351 SUPERFAMILY SSF160544 238 345 4.45E-33 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal M634_09090 33852074a63751e3a9d4582006f9db41 351 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 6 28 2.0E-44 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 M634_09090 33852074a63751e3a9d4582006f9db41 351 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 202 220 2.0E-44 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 M634_09090 33852074a63751e3a9d4582006f9db41 351 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 222 239 2.0E-44 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 M634_09090 33852074a63751e3a9d4582006f9db41 351 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 266 281 2.0E-44 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 M634_09090 33852074a63751e3a9d4582006f9db41 351 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 296 317 2.0E-44 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 M634_09090 33852074a63751e3a9d4582006f9db41 351 Gene3D G3DSA:3.40.1690.10 211 349 3.0E-55 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal M634_09090 33852074a63751e3a9d4582006f9db41 351 TIGRFAM TIGR01404 FlhB_rel_III: type III secretion protein, YscU/HrpY family 3 343 6.4E-135 T 12-10-2018 IPR006307 Type III exporter system, secretion apparatus protein BsaZ GO:0009306|GO:0016021 M634_09090 33852074a63751e3a9d4582006f9db41 351 Pfam PF01312 FlhB HrpN YscU SpaS Family 3 340 3.5E-114 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 M634_16355 7a1724afea381483aeadd7f6a49c53b9 504 Gene3D G3DSA:3.30.420.10 129 288 6.1E-11 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M634_16355 7a1724afea381483aeadd7f6a49c53b9 504 SUPERFAMILY SSF53098 131 263 1.12E-16 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M634_16355 7a1724afea381483aeadd7f6a49c53b9 504 SUPERFAMILY SSF46689 381 484 2.51E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_16355 7a1724afea381483aeadd7f6a49c53b9 504 Pfam PF13551 Winged helix-turn helix 386 443 1.3E-7 T 12-10-2018 M634_16355 7a1724afea381483aeadd7f6a49c53b9 504 SUPERFAMILY SSF46689 11 111 1.0E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_16355 7a1724afea381483aeadd7f6a49c53b9 504 Pfam PF13384 Homeodomain-like domain 17 48 9.0E-6 T 12-10-2018 M634_16355 7a1724afea381483aeadd7f6a49c53b9 504 Pfam PF00665 Integrase core domain 134 249 1.6E-10 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M634_21125 c4573ac013a337615937f2b2d60f90e6 305 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 5 299 1.5E-112 T 12-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 M634_21125 c4573ac013a337615937f2b2d60f90e6 305 PRINTS PR00990 Ribokinase signature 33 52 2.9E-35 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 M634_21125 c4573ac013a337615937f2b2d60f90e6 305 PRINTS PR00990 Ribokinase signature 217 228 2.9E-35 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 M634_21125 c4573ac013a337615937f2b2d60f90e6 305 PRINTS PR00990 Ribokinase signature 173 188 2.9E-35 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 M634_21125 c4573ac013a337615937f2b2d60f90e6 305 PRINTS PR00990 Ribokinase signature 6 27 2.9E-35 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 M634_21125 c4573ac013a337615937f2b2d60f90e6 305 PRINTS PR00990 Ribokinase signature 105 118 2.9E-35 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 M634_21125 c4573ac013a337615937f2b2d60f90e6 305 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 246 259 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 M634_21125 c4573ac013a337615937f2b2d60f90e6 305 Hamap MF_01987 Ribokinase [rbsK]. 2 301 26.532 T 12-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 M634_21125 c4573ac013a337615937f2b2d60f90e6 305 Gene3D G3DSA:3.40.1190.20 1 300 1.3E-106 T 12-10-2018 IPR029056 Ribokinase-like M634_21125 c4573ac013a337615937f2b2d60f90e6 305 Pfam PF00294 pfkB family carbohydrate kinase 1 294 4.7E-76 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB M634_21125 c4573ac013a337615937f2b2d60f90e6 305 SUPERFAMILY SSF53613 1 302 9.04E-87 T 12-10-2018 IPR029056 Ribokinase-like M634_13940 a44483954fdf1cec5fe08672b44fc30e 190 Pfam PF03938 Outer membrane protein (OmpH-like) 34 189 9.1E-27 T 12-10-2018 IPR005632 Chaperone protein Skp GO:0051082 M634_13940 a44483954fdf1cec5fe08672b44fc30e 190 Gene3D G3DSA:3.30.910.20 46 190 3.4E-34 T 12-10-2018 IPR024930 Skp domain superfamily M634_13940 a44483954fdf1cec5fe08672b44fc30e 190 SUPERFAMILY SSF111384 47 190 2.62E-31 T 12-10-2018 M634_13940 a44483954fdf1cec5fe08672b44fc30e 190 SMART SM00935 36 190 9.1E-43 T 12-10-2018 IPR005632 Chaperone protein Skp GO:0051082 M634_13940 a44483954fdf1cec5fe08672b44fc30e 190 PIRSF PIRSF002094 10 190 9.2E-41 T 12-10-2018 IPR005632 Chaperone protein Skp GO:0051082 M634_06250 8f8e23908bd7998d7415508743d6a583 401 SUPERFAMILY SSF47005 106 150 4.58E-12 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 M634_06250 8f8e23908bd7998d7415508743d6a583 401 Gene3D G3DSA:4.10.320.10 102 152 5.3E-22 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 M634_06250 8f8e23908bd7998d7415508743d6a583 401 SUPERFAMILY SSF51230 1 95 4.19E-24 T 12-10-2018 IPR011053 Single hybrid motif M634_06250 8f8e23908bd7998d7415508743d6a583 401 Pfam PF00364 Biotin-requiring enzyme 4 76 2.2E-18 T 12-10-2018 IPR000089 Biotin/lipoyl attachment M634_06250 8f8e23908bd7998d7415508743d6a583 401 Gene3D G3DSA:3.30.559.10 169 401 6.2E-98 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 M634_06250 8f8e23908bd7998d7415508743d6a583 401 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 171 399 3.0E-82 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 M634_06250 8f8e23908bd7998d7415508743d6a583 401 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 M634_06250 8f8e23908bd7998d7415508743d6a583 401 Gene3D G3DSA:2.40.50.100 1 80 3.5E-22 T 12-10-2018 M634_06250 8f8e23908bd7998d7415508743d6a583 401 Pfam PF02817 e3 binding domain 113 146 6.9E-13 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 M634_06250 8f8e23908bd7998d7415508743d6a583 401 SUPERFAMILY SSF52777 171 400 3.11E-90 T 12-10-2018 M634_06250 8f8e23908bd7998d7415508743d6a583 401 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 401 3.5E-188 T 12-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 M634_18565 199d9138f77d2df94bfcad3c8f66af96 341 Gene3D G3DSA:2.40.30.170 223 339 1.1E-34 T 12-10-2018 M634_18565 199d9138f77d2df94bfcad3c8f66af96 341 SUPERFAMILY SSF111369 186 265 3.53E-12 T 12-10-2018 M634_18565 199d9138f77d2df94bfcad3c8f66af96 341 Gene3D G3DSA:2.40.50.100 53 85 3.9E-11 T 12-10-2018 M634_18565 199d9138f77d2df94bfcad3c8f66af96 341 SUPERFAMILY SSF111369 52 128 4.18E-9 T 12-10-2018 M634_18565 199d9138f77d2df94bfcad3c8f66af96 341 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 52 284 9.7E-15 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M634_18565 199d9138f77d2df94bfcad3c8f66af96 341 Gene3D G3DSA:1.10.287.470 86 110 3.9E-11 T 12-10-2018 M634_18565 199d9138f77d2df94bfcad3c8f66af96 341 SUPERFAMILY SSF111369 119 174 3.4E-6 T 12-10-2018 M634_18565 199d9138f77d2df94bfcad3c8f66af96 341 Gene3D G3DSA:1.10.287.470 117 174 4.5E-5 T 12-10-2018 M634_20975 ab255365ac57d1217f8a0361e83b199e 199 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site M634_20975 ab255365ac57d1217f8a0361e83b199e 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 1.5E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M634_20975 ab255365ac57d1217f8a0361e83b199e 199 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 198 96.625 T 12-10-2018 IPR017757 Transcriptional repressor BetI M634_20975 ab255365ac57d1217f8a0361e83b199e 199 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 2 192 4.9E-75 T 12-10-2018 IPR017757 Transcriptional repressor BetI M634_20975 ab255365ac57d1217f8a0361e83b199e 199 Gene3D G3DSA:1.10.357.10 5 196 2.3E-44 T 12-10-2018 M634_20975 ab255365ac57d1217f8a0361e83b199e 199 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 85 192 6.9E-32 T 12-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal M634_20975 ab255365ac57d1217f8a0361e83b199e 199 SUPERFAMILY SSF46689 4 73 4.51E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_20975 ab255365ac57d1217f8a0361e83b199e 199 SUPERFAMILY SSF48498 87 192 4.56E-16 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily M634_14580 d4e5c32be499102b07b090f108c184c4 151 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 12 145 1.5E-36 T 12-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 M634_14580 d4e5c32be499102b07b090f108c184c4 151 Gene3D G3DSA:3.40.630.30 3 149 2.9E-40 T 12-10-2018 M634_14580 d4e5c32be499102b07b090f108c184c4 151 Pfam PF00583 Acetyltransferase (GNAT) family 19 121 3.0E-15 T 12-10-2018 IPR000182 GNAT domain M634_14580 d4e5c32be499102b07b090f108c184c4 151 SUPERFAMILY SSF55729 1 147 5.4E-32 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_16610 dade34ab84c764dfcf49c9e5d8411b2a 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 5.1E-12 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M634_16610 dade34ab84c764dfcf49c9e5d8411b2a 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 5.1E-12 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M634_16610 dade34ab84c764dfcf49c9e5d8411b2a 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 5.1E-12 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M634_16610 dade34ab84c764dfcf49c9e5d8411b2a 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 5.1E-12 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M634_16610 dade34ab84c764dfcf49c9e5d8411b2a 216 SUPERFAMILY SSF56784 1 213 3.86E-53 T 12-10-2018 IPR036412 HAD-like superfamily M634_16610 dade34ab84c764dfcf49c9e5d8411b2a 216 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 181 3.6E-33 T 12-10-2018 M634_16610 dade34ab84c764dfcf49c9e5d8411b2a 216 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 79 182 9.2E-18 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M634_16610 dade34ab84c764dfcf49c9e5d8411b2a 216 Gene3D G3DSA:3.40.50.1000 7 192 5.0E-51 T 12-10-2018 IPR023214 HAD superfamily M634_16610 dade34ab84c764dfcf49c9e5d8411b2a 216 Gene3D G3DSA:1.10.150.240 17 84 5.0E-51 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 M634_04845 ef73bfe6ce40993c8548493c2f8e8b3f 109 SMART SM01323 17 101 1.1E-38 T 12-10-2018 IPR003849 Preprotein translocase YajC M634_04845 ef73bfe6ce40993c8548493c2f8e8b3f 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 57 75 9.6E-16 T 12-10-2018 IPR003849 Preprotein translocase YajC M634_04845 ef73bfe6ce40993c8548493c2f8e8b3f 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 19 39 9.6E-16 T 12-10-2018 IPR003849 Preprotein translocase YajC M634_04845 ef73bfe6ce40993c8548493c2f8e8b3f 109 Pfam PF02699 Preprotein translocase subunit 21 98 3.5E-26 T 12-10-2018 IPR003849 Preprotein translocase YajC M634_04845 ef73bfe6ce40993c8548493c2f8e8b3f 109 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 19 101 1.3E-30 T 12-10-2018 IPR003849 Preprotein translocase YajC M634_15990 c1eeeb1e2108cd5162040211ced02813 347 Gene3D G3DSA:3.30.420.40 14 331 5.4E-131 T 12-10-2018 M634_15990 c1eeeb1e2108cd5162040211ced02813 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 1.4E-165 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 M634_15990 c1eeeb1e2108cd5162040211ced02813 347 Gene3D G3DSA:3.90.640.10 190 263 5.4E-131 T 12-10-2018 M634_15990 c1eeeb1e2108cd5162040211ced02813 347 SUPERFAMILY SSF53067 9 152 2.35E-37 T 12-10-2018 M634_15990 c1eeeb1e2108cd5162040211ced02813 347 SUPERFAMILY SSF53067 154 340 5.11E-50 T 12-10-2018 M634_15990 c1eeeb1e2108cd5162040211ced02813 347 Pfam PF06723 MreB/Mbl protein 11 338 1.8E-148 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 M634_15990 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 2.5E-63 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 M634_15990 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 2.5E-63 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 M634_15990 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 2.5E-63 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 M634_15990 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 2.5E-63 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 M634_15990 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 2.5E-63 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 M634_15990 c1eeeb1e2108cd5162040211ced02813 347 Gene3D G3DSA:3.30.420.40 158 321 5.4E-131 T 12-10-2018 M634_21025 6eed5ee4d1cad01d5e0b07b18e3d9641 907 Pfam PF00563 EAL domain 652 891 5.6E-69 T 12-10-2018 IPR001633 EAL domain M634_21025 6eed5ee4d1cad01d5e0b07b18e3d9641 907 Pfam PF00990 Diguanylate cyclase, GGDEF domain 480 595 3.0E-13 T 12-10-2018 IPR000160 GGDEF domain M634_21025 6eed5ee4d1cad01d5e0b07b18e3d9641 907 SUPERFAMILY SSF55073 485 618 8.63E-15 T 12-10-2018 IPR029787 Nucleotide cyclase M634_21025 6eed5ee4d1cad01d5e0b07b18e3d9641 907 Pfam PF05228 CHASE4 domain 60 218 7.7E-29 T 12-10-2018 IPR007892 CHASE4 M634_21025 6eed5ee4d1cad01d5e0b07b18e3d9641 907 SUPERFAMILY SSF55785 349 465 1.08E-11 T 12-10-2018 IPR035965 PAS domain superfamily M634_21025 6eed5ee4d1cad01d5e0b07b18e3d9641 907 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 355 474 2.6E-9 T 12-10-2018 IPR000014 PAS domain M634_21025 6eed5ee4d1cad01d5e0b07b18e3d9641 907 Gene3D G3DSA:3.30.70.270 468 624 3.4E-16 T 12-10-2018 M634_21025 6eed5ee4d1cad01d5e0b07b18e3d9641 907 Gene3D G3DSA:3.20.20.450 648 903 4.1E-82 T 12-10-2018 IPR035919 EAL domain superfamily M634_21025 6eed5ee4d1cad01d5e0b07b18e3d9641 907 SMART SM00267 468 634 8.4E-7 T 12-10-2018 IPR000160 GGDEF domain M634_21025 6eed5ee4d1cad01d5e0b07b18e3d9641 907 SMART SM00091 358 424 0.0021 T 12-10-2018 IPR000014 PAS domain M634_21025 6eed5ee4d1cad01d5e0b07b18e3d9641 907 SUPERFAMILY SSF141868 652 901 1.96E-79 T 12-10-2018 IPR035919 EAL domain superfamily M634_21025 6eed5ee4d1cad01d5e0b07b18e3d9641 907 Gene3D G3DSA:3.30.450.20 358 467 7.6E-13 T 12-10-2018 M634_21025 6eed5ee4d1cad01d5e0b07b18e3d9641 907 Pfam PF13426 PAS domain 370 467 3.0E-8 T 12-10-2018 IPR000014 PAS domain M634_21025 6eed5ee4d1cad01d5e0b07b18e3d9641 907 SMART SM00052 646 896 2.2E-97 T 12-10-2018 IPR001633 EAL domain M634_04325 a462dc3e568fb9eedff4022840bc9118 581 Pfam PF08448 PAS fold 285 395 1.5E-13 T 12-10-2018 IPR013656 PAS fold-4 M634_04325 a462dc3e568fb9eedff4022840bc9118 581 SMART SM00267 401 577 9.4E-65 T 12-10-2018 IPR000160 GGDEF domain M634_04325 a462dc3e568fb9eedff4022840bc9118 581 SUPERFAMILY SSF55073 417 577 4.39E-47 T 12-10-2018 IPR029787 Nucleotide cyclase M634_04325 a462dc3e568fb9eedff4022840bc9118 581 Gene3D G3DSA:3.30.70.270 414 580 2.7E-52 T 12-10-2018 M634_04325 a462dc3e568fb9eedff4022840bc9118 581 Gene3D G3DSA:3.30.450.20 145 259 1.9E-7 T 12-10-2018 M634_04325 a462dc3e568fb9eedff4022840bc9118 581 Pfam PF13188 PAS domain 40 78 4.8E-4 T 12-10-2018 IPR000014 PAS domain M634_04325 a462dc3e568fb9eedff4022840bc9118 581 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 408 575 5.3E-48 T 12-10-2018 IPR000160 GGDEF domain M634_04325 a462dc3e568fb9eedff4022840bc9118 581 SUPERFAMILY SSF55785 266 392 1.24E-18 T 12-10-2018 IPR035965 PAS domain superfamily M634_04325 a462dc3e568fb9eedff4022840bc9118 581 SUPERFAMILY SSF55785 150 251 9.42E-7 T 12-10-2018 IPR035965 PAS domain superfamily M634_04325 a462dc3e568fb9eedff4022840bc9118 581 SMART SM00091 158 223 22.0 T 12-10-2018 IPR000014 PAS domain M634_04325 a462dc3e568fb9eedff4022840bc9118 581 SMART SM00091 38 108 28.0 T 12-10-2018 IPR000014 PAS domain M634_04325 a462dc3e568fb9eedff4022840bc9118 581 SMART SM00091 279 346 0.075 T 12-10-2018 IPR000014 PAS domain M634_04325 a462dc3e568fb9eedff4022840bc9118 581 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 276 401 2.4E-14 T 12-10-2018 IPR000014 PAS domain M634_04325 a462dc3e568fb9eedff4022840bc9118 581 Gene3D G3DSA:3.30.450.20 264 407 6.2E-23 T 12-10-2018 M634_04325 a462dc3e568fb9eedff4022840bc9118 581 Pfam PF00990 Diguanylate cyclase, GGDEF domain 413 573 1.2E-49 T 12-10-2018 IPR000160 GGDEF domain M634_12690 d6947cabc4002c16f47957454ccffda0 467 SMART SM00382 167 310 5.1E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_12690 d6947cabc4002c16f47957454ccffda0 467 Pfam PF00158 Sigma-54 interaction domain 148 313 3.1E-69 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 M634_12690 d6947cabc4002c16f47957454ccffda0 467 SUPERFAMILY SSF52540 147 390 2.26E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_12690 d6947cabc4002c16f47957454ccffda0 467 Pfam PF02954 Bacterial regulatory protein, Fis family 418 458 4.8E-13 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M634_12690 d6947cabc4002c16f47957454ccffda0 467 Gene3D G3DSA:3.40.50.300 138 318 2.1E-65 T 12-10-2018 M634_12690 d6947cabc4002c16f47957454ccffda0 467 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 360 369 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site M634_12690 d6947cabc4002c16f47957454ccffda0 467 Gene3D G3DSA:3.40.50.2300 2 137 5.9E-33 T 12-10-2018 M634_12690 d6947cabc4002c16f47957454ccffda0 467 Pfam PF00072 Response regulator receiver domain 14 122 1.2E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_12690 d6947cabc4002c16f47957454ccffda0 467 SUPERFAMILY SSF46689 360 457 9.68E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_12690 d6947cabc4002c16f47957454ccffda0 467 SMART SM00448 11 122 1.5E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_12690 d6947cabc4002c16f47957454ccffda0 467 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 233 248 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M634_12690 d6947cabc4002c16f47957454ccffda0 467 Gene3D G3DSA:1.10.8.60 319 397 3.6E-24 T 12-10-2018 M634_12690 d6947cabc4002c16f47957454ccffda0 467 SUPERFAMILY SSF52172 12 191 1.57E-41 T 12-10-2018 IPR011006 CheY-like superfamily M634_12690 d6947cabc4002c16f47957454ccffda0 467 Gene3D G3DSA:1.10.10.60 412 456 1.0E-9 T 12-10-2018 M634_14545 162e9f2a6ccdf641af9ff44a56cecb20 406 Gene3D G3DSA:3.40.720.10 3 406 3.2E-149 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 M634_14545 162e9f2a6ccdf641af9ff44a56cecb20 406 Hamap MF_00740 Phosphopentomutase [deoB]. 1 406 53.81 T 12-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 M634_14545 162e9f2a6ccdf641af9ff44a56cecb20 406 Pfam PF01676 Metalloenzyme superfamily 2 397 6.3E-42 T 12-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 M634_14545 162e9f2a6ccdf641af9ff44a56cecb20 406 SUPERFAMILY SSF143856 118 234 9.02E-48 T 12-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 M634_14545 162e9f2a6ccdf641af9ff44a56cecb20 406 PIRSF PIRSF001491 1 406 3.8E-160 T 12-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 M634_14545 162e9f2a6ccdf641af9ff44a56cecb20 406 SUPERFAMILY SSF53649 1 406 1.23E-68 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 M634_14545 162e9f2a6ccdf641af9ff44a56cecb20 406 Gene3D G3DSA:3.30.70.1250 116 237 3.2E-149 T 12-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 M634_14545 162e9f2a6ccdf641af9ff44a56cecb20 406 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 403 2.3E-176 T 12-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 M634_02020 af30cd280809b32047aded8c5bcf848f 88 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 3.6E-46 T 12-10-2018 IPR009383 Protein of unknown function DUF1040 M634_02020 af30cd280809b32047aded8c5bcf848f 88 Gene3D G3DSA:1.10.1580.20 1 88 4.4E-44 T 12-10-2018 IPR038134 YihD-like superfamily M634_02020 af30cd280809b32047aded8c5bcf848f 88 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 2.0E-39 T 12-10-2018 IPR009383 Protein of unknown function DUF1040 M634_22735 cda72d059bc6f42f48dd68b57178afd7 405 Gene3D G3DSA:1.10.441.10 159 316 6.1E-129 T 12-10-2018 M634_22735 cda72d059bc6f42f48dd68b57178afd7 405 PIRSF PIRSF001480 8 405 1.5E-100 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M634_22735 cda72d059bc6f42f48dd68b57178afd7 405 Pfam PF01238 Phosphomannose isomerase type I 12 369 4.8E-86 T 12-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M634_22735 cda72d059bc6f42f48dd68b57178afd7 405 PRINTS PR00714 Phosphomannose isomerase type I signature 271 290 1.2E-68 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M634_22735 cda72d059bc6f42f48dd68b57178afd7 405 PRINTS PR00714 Phosphomannose isomerase type I signature 236 251 1.2E-68 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M634_22735 cda72d059bc6f42f48dd68b57178afd7 405 PRINTS PR00714 Phosphomannose isomerase type I signature 252 271 1.2E-68 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M634_22735 cda72d059bc6f42f48dd68b57178afd7 405 PRINTS PR00714 Phosphomannose isomerase type I signature 42 57 1.2E-68 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M634_22735 cda72d059bc6f42f48dd68b57178afd7 405 PRINTS PR00714 Phosphomannose isomerase type I signature 14 32 1.2E-68 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M634_22735 cda72d059bc6f42f48dd68b57178afd7 405 PRINTS PR00714 Phosphomannose isomerase type I signature 290 309 1.2E-68 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M634_22735 cda72d059bc6f42f48dd68b57178afd7 405 PRINTS PR00714 Phosphomannose isomerase type I signature 90 111 1.2E-68 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M634_22735 cda72d059bc6f42f48dd68b57178afd7 405 PRINTS PR00714 Phosphomannose isomerase type I signature 135 158 1.2E-68 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M634_22735 cda72d059bc6f42f48dd68b57178afd7 405 SUPERFAMILY SSF51182 9 395 1.6E-104 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily M634_22735 cda72d059bc6f42f48dd68b57178afd7 405 Gene3D G3DSA:2.60.120.10 16 291 6.1E-129 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M634_22735 cda72d059bc6f42f48dd68b57178afd7 405 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 10 397 1.9E-91 T 12-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M634_22735 cda72d059bc6f42f48dd68b57178afd7 405 Gene3D G3DSA:2.60.120.10 317 396 6.1E-129 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M634_22735 cda72d059bc6f42f48dd68b57178afd7 405 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 271 296 - T 12-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M634_22735 cda72d059bc6f42f48dd68b57178afd7 405 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 135 143 - T 12-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M634_03985 f4abaa08dd54e29fbe6a6439c9f2ab2d 406 SUPERFAMILY SSF81301 2 119 1.42E-30 T 12-10-2018 M634_03985 f4abaa08dd54e29fbe6a6439c9f2ab2d 406 Pfam PF01743 Poly A polymerase head domain 3 122 2.0E-19 T 12-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 M634_03985 f4abaa08dd54e29fbe6a6439c9f2ab2d 406 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 150 212 4.5E-13 T 12-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 M634_03985 f4abaa08dd54e29fbe6a6439c9f2ab2d 406 PIRSF PIRSF000813 1 406 1.7E-204 T 12-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 M634_03985 f4abaa08dd54e29fbe6a6439c9f2ab2d 406 SUPERFAMILY SSF81891 120 400 2.75E-53 T 12-10-2018 M634_03985 f4abaa08dd54e29fbe6a6439c9f2ab2d 406 Gene3D G3DSA:3.30.460.10 1 121 2.5E-29 T 12-10-2018 M634_03985 f4abaa08dd54e29fbe6a6439c9f2ab2d 406 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 41.957 T 12-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 M634_03985 f4abaa08dd54e29fbe6a6439c9f2ab2d 406 Gene3D G3DSA:1.10.3090.10 122 404 6.2E-43 T 12-10-2018 M634_03985 f4abaa08dd54e29fbe6a6439c9f2ab2d 406 Pfam PF01966 HD domain 229 323 1.7E-8 T 12-10-2018 IPR006674 HD domain M634_03985 f4abaa08dd54e29fbe6a6439c9f2ab2d 406 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 406 52.047 T 12-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 M634_14660 efe0ee3eb09a01adfb363dffdf16e2e3 495 Gene3D G3DSA:2.40.50.140 135 198 6.0E-17 T 12-10-2018 M634_14660 efe0ee3eb09a01adfb363dffdf16e2e3 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 2.7E-8 T 12-10-2018 M634_14660 efe0ee3eb09a01adfb363dffdf16e2e3 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 2.8E-22 T 12-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication M634_14660 efe0ee3eb09a01adfb363dffdf16e2e3 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 440 489 1.9E-18 T 12-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication M634_14660 efe0ee3eb09a01adfb363dffdf16e2e3 495 Gene3D G3DSA:3.30.300.20 199 277 1.7E-30 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta M634_14660 efe0ee3eb09a01adfb363dffdf16e2e3 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 2.5E-125 T 12-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 M634_14660 efe0ee3eb09a01adfb363dffdf16e2e3 495 Gene3D G3DSA:1.10.150.20 352 421 8.3E-30 T 12-10-2018 M634_14660 efe0ee3eb09a01adfb363dffdf16e2e3 495 Pfam PF13184 NusA-like KH domain 230 297 3.1E-27 T 12-10-2018 IPR025249 KH domain, NusA-like GO:0003723 M634_14660 efe0ee3eb09a01adfb363dffdf16e2e3 495 SUPERFAMILY SSF47794 429 492 1.0E-16 T 12-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 M634_14660 efe0ee3eb09a01adfb363dffdf16e2e3 495 SUPERFAMILY SSF47794 356 415 7.06E-17 T 12-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 M634_14660 efe0ee3eb09a01adfb363dffdf16e2e3 495 Pfam PF08529 NusA N-terminal domain 4 123 5.3E-35 T 12-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 M634_14660 efe0ee3eb09a01adfb363dffdf16e2e3 495 SUPERFAMILY SSF54814 201 278 6.34E-29 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 M634_14660 efe0ee3eb09a01adfb363dffdf16e2e3 495 SUPERFAMILY SSF54814 279 342 2.75E-15 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 M634_14660 efe0ee3eb09a01adfb363dffdf16e2e3 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 424 28.773 T 12-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 M634_14660 efe0ee3eb09a01adfb363dffdf16e2e3 495 Gene3D G3DSA:3.30.1480.10 1 129 1.2E-43 T 12-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 M634_14660 efe0ee3eb09a01adfb363dffdf16e2e3 495 Gene3D G3DSA:1.10.150.20 431 490 5.7E-25 T 12-10-2018 M634_14660 efe0ee3eb09a01adfb363dffdf16e2e3 495 SUPERFAMILY SSF50249 132 199 1.63E-16 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_14660 efe0ee3eb09a01adfb363dffdf16e2e3 495 SMART SM00316 133 198 9.4E-6 T 12-10-2018 IPR022967 RNA-binding domain, S1 M634_14660 efe0ee3eb09a01adfb363dffdf16e2e3 495 SUPERFAMILY SSF69705 1 126 2.49E-40 T 12-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 M634_14660 efe0ee3eb09a01adfb363dffdf16e2e3 495 Gene3D G3DSA:3.30.300.20 278 345 1.3E-24 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta M634_20780 f85da1036e2af57148ad5fc5e86784cd 308 Gene3D G3DSA:3.40.50.1220 183 308 2.3E-58 T 12-10-2018 M634_20780 f85da1036e2af57148ad5fc5e86784cd 308 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 252 278 - T 12-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 M634_20780 f85da1036e2af57148ad5fc5e86784cd 308 SUPERFAMILY SSF52467 186 308 1.14E-48 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily M634_20780 f85da1036e2af57148ad5fc5e86784cd 308 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 189 271 6.2E-37 T 12-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 M634_20780 f85da1036e2af57148ad5fc5e86784cd 308 SMART SM00893 3 186 3.1E-34 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 M634_20780 f85da1036e2af57148ad5fc5e86784cd 308 PIRSF PIRSF000089 1 308 1.1E-110 T 12-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 M634_20780 f85da1036e2af57148ad5fc5e86784cd 308 SUPERFAMILY SSF52402 4 181 3.42E-46 T 12-10-2018 M634_20780 f85da1036e2af57148ad5fc5e86784cd 308 Gene3D G3DSA:3.40.50.620 4 181 3.2E-47 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M634_20780 f85da1036e2af57148ad5fc5e86784cd 308 Pfam PF01012 Electron transfer flavoprotein domain 4 176 2.8E-33 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 M634_03410 7fc5641f69291cbf481ff2b64259efcd 126 SUPERFAMILY SSF64263 1 119 5.36E-51 T 12-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03410 7fc5641f69291cbf481ff2b64259efcd 126 Pfam PF01196 Ribosomal protein L17 20 116 1.0E-34 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03410 7fc5641f69291cbf481ff2b64259efcd 126 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 5.5E-49 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03410 7fc5641f69291cbf481ff2b64259efcd 126 Gene3D G3DSA:3.90.1030.10 1 117 4.0E-48 T 12-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03410 7fc5641f69291cbf481ff2b64259efcd 126 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03410 7fc5641f69291cbf481ff2b64259efcd 126 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.798 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_18025 c7eff909cef30790a3b72ced7c5f4bc1 158 ProSitePatterns PS00519 AsnC-type HTH domain signature. 23 49 - T 12-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site M634_18025 c7eff909cef30790a3b72ced7c5f4bc1 158 SUPERFAMILY SSF46785 3 64 2.05E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_18025 c7eff909cef30790a3b72ced7c5f4bc1 158 Gene3D G3DSA:1.10.10.10 1 56 3.4E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_18025 c7eff909cef30790a3b72ced7c5f4bc1 158 Gene3D G3DSA:3.30.70.920 57 151 5.2E-26 T 12-10-2018 M634_18025 c7eff909cef30790a3b72ced7c5f4bc1 158 Pfam PF13412 Winged helix-turn-helix DNA-binding 5 51 3.9E-16 T 12-10-2018 M634_18025 c7eff909cef30790a3b72ced7c5f4bc1 158 Pfam PF01037 Lrp/AsnC ligand binding domain 71 145 4.0E-22 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain M634_18025 c7eff909cef30790a3b72ced7c5f4bc1 158 SMART SM00344 5 114 2.8E-43 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 M634_18025 c7eff909cef30790a3b72ced7c5f4bc1 158 SUPERFAMILY SSF54909 65 150 1.74E-20 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel M634_18025 c7eff909cef30790a3b72ced7c5f4bc1 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 7.6E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M634_18025 c7eff909cef30790a3b72ced7c5f4bc1 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 7.6E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M634_18025 c7eff909cef30790a3b72ced7c5f4bc1 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 7.6E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M634_12390 02dd3fcfa894635c453f436778d0d3c9 480 SUPERFAMILY SSF50800 74 169 2.09E-27 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily M634_12390 02dd3fcfa894635c453f436778d0d3c9 480 Pfam PF00224 Pyruvate kinase, barrel domain 6 345 2.9E-131 T 12-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M634_12390 02dd3fcfa894635c453f436778d0d3c9 480 Gene3D G3DSA:2.40.33.10 74 172 4.4E-155 T 12-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M634_12390 02dd3fcfa894635c453f436778d0d3c9 480 SUPERFAMILY SSF52935 329 480 9.68E-38 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M634_12390 02dd3fcfa894635c453f436778d0d3c9 480 PRINTS PR01050 Pyruvate kinase family signature 63 79 6.4E-54 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M634_12390 02dd3fcfa894635c453f436778d0d3c9 480 PRINTS PR01050 Pyruvate kinase family signature 300 318 6.4E-54 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M634_12390 02dd3fcfa894635c453f436778d0d3c9 480 PRINTS PR01050 Pyruvate kinase family signature 190 204 6.4E-54 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M634_12390 02dd3fcfa894635c453f436778d0d3c9 480 PRINTS PR01050 Pyruvate kinase family signature 250 274 6.4E-54 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M634_12390 02dd3fcfa894635c453f436778d0d3c9 480 PRINTS PR01050 Pyruvate kinase family signature 223 249 6.4E-54 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M634_12390 02dd3fcfa894635c453f436778d0d3c9 480 PRINTS PR01050 Pyruvate kinase family signature 275 299 6.4E-54 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M634_12390 02dd3fcfa894635c453f436778d0d3c9 480 PRINTS PR01050 Pyruvate kinase family signature 319 335 6.4E-54 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M634_12390 02dd3fcfa894635c453f436778d0d3c9 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 478 4.2E-29 T 12-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M634_12390 02dd3fcfa894635c453f436778d0d3c9 480 Gene3D G3DSA:3.40.1380.20 342 476 4.4E-155 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M634_12390 02dd3fcfa894635c453f436778d0d3c9 480 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 12-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M634_12390 02dd3fcfa894635c453f436778d0d3c9 480 SUPERFAMILY SSF51621 4 344 2.23E-86 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 M634_12390 02dd3fcfa894635c453f436778d0d3c9 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 479 9.6E-169 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M634_12390 02dd3fcfa894635c453f436778d0d3c9 480 Gene3D G3DSA:3.20.20.60 6 341 4.4E-155 T 12-10-2018 M634_14170 d6e4f40aee65071e266091983ffdb2d9 181 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 22 178 1.3E-42 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 M634_14170 d6e4f40aee65071e266091983ffdb2d9 181 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 56 73 - T 12-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 M634_14170 d6e4f40aee65071e266091983ffdb2d9 181 PIRSF PIRSF001467 5 181 3.8E-24 T 12-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 M634_14170 d6e4f40aee65071e266091983ffdb2d9 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 35 50 9.2E-11 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 M634_14170 d6e4f40aee65071e266091983ffdb2d9 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 9.2E-11 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 M634_14170 d6e4f40aee65071e266091983ffdb2d9 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 61 73 9.2E-11 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 M634_14170 d6e4f40aee65071e266091983ffdb2d9 181 Gene3D G3DSA:2.40.100.10 18 181 1.8E-58 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily M634_14170 d6e4f40aee65071e266091983ffdb2d9 181 SUPERFAMILY SSF50891 18 180 1.9E-52 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily M634_09105 92aec7af3383600929b50355a563740c 216 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 144 159 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M634_09105 92aec7af3383600929b50355a563740c 216 Pfam PF00813 FliP family 14 211 2.3E-68 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M634_09105 92aec7af3383600929b50355a563740c 216 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 192 204 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M634_09105 92aec7af3383600929b50355a563740c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 165 186 7.8E-71 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M634_09105 92aec7af3383600929b50355a563740c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 189 214 7.8E-71 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M634_09105 92aec7af3383600929b50355a563740c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 50 69 7.8E-71 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M634_09105 92aec7af3383600929b50355a563740c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 30 50 7.8E-71 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M634_09105 92aec7af3383600929b50355a563740c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 144 164 7.8E-71 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M634_09105 92aec7af3383600929b50355a563740c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 11 30 7.8E-71 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M634_09105 92aec7af3383600929b50355a563740c 216 TIGRFAM TIGR01102 yscR: type III secretion apparatus protein, YscR/HrcR family 10 211 8.3E-92 T 12-10-2018 IPR005773 Yop virulence translocation protein R GO:0015031|GO:0016021 M634_17320 16bf6f30c822bf1c1d69be9cde317187 547 Pfam PF02321 Outer membrane efflux protein 69 251 9.4E-25 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 M634_17320 16bf6f30c822bf1c1d69be9cde317187 547 Pfam PF02321 Outer membrane efflux protein 311 490 3.0E-21 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 M634_17320 16bf6f30c822bf1c1d69be9cde317187 547 SUPERFAMILY SSF56954 2 494 1.12E-93 T 12-10-2018 M634_17320 16bf6f30c822bf1c1d69be9cde317187 547 Gene3D G3DSA:2.20.200.10 106 381 1.2E-109 T 12-10-2018 M634_17320 16bf6f30c822bf1c1d69be9cde317187 547 Gene3D G3DSA:1.20.1600.10 59 493 1.2E-109 T 12-10-2018 M634_15680 9dbb265ec477a251d47b61eb6aaceea9 251 Gene3D G3DSA:3.20.20.370 1 243 4.5E-72 T 12-10-2018 M634_15680 9dbb265ec477a251d47b61eb6aaceea9 251 SUPERFAMILY SSF88713 1 242 3.56E-68 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 M634_15680 9dbb265ec477a251d47b61eb6aaceea9 251 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 1 239 39.895 T 12-10-2018 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 M634_15680 9dbb265ec477a251d47b61eb6aaceea9 251 Pfam PF04794 YdjC-like protein 2 230 3.7E-53 T 12-10-2018 IPR006879 Carbohydrate deacetylase YdjC-like M634_03715 9e689f43d066ee384132aa5e7d6d7669 182 SUPERFAMILY SSF48317 12 179 3.79E-38 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily M634_03715 9e689f43d066ee384132aa5e7d6d7669 182 SMART SM00014 71 177 3.2E-15 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase M634_03715 9e689f43d066ee384132aa5e7d6d7669 182 Gene3D G3DSA:1.20.144.10 96 181 1.2E-18 T 12-10-2018 M634_03715 9e689f43d066ee384132aa5e7d6d7669 182 Pfam PF01569 PAP2 superfamily 73 180 2.2E-19 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase M634_21450 fec89e3d343c79c3ed28a970dd797360 70 Gene3D G3DSA:2.40.50.140 2 69 4.7E-28 T 12-10-2018 M634_21450 fec89e3d343c79c3ed28a970dd797360 70 SUPERFAMILY SSF50249 3 69 2.42E-24 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_21450 fec89e3d343c79c3ed28a970dd797360 70 PRINTS PR00050 Cold shock protein signature 28 37 1.0E-16 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 M634_21450 fec89e3d343c79c3ed28a970dd797360 70 PRINTS PR00050 Cold shock protein signature 7 22 1.0E-16 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 M634_21450 fec89e3d343c79c3ed28a970dd797360 70 PRINTS PR00050 Cold shock protein signature 43 61 1.0E-16 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 M634_21450 fec89e3d343c79c3ed28a970dd797360 70 PIRSF PIRSF002599 1 70 3.3E-24 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 M634_21450 fec89e3d343c79c3ed28a970dd797360 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 68 1.2E-28 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 M634_21450 fec89e3d343c79c3ed28a970dd797360 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 12-10-2018 IPR019844 Cold-shock conserved site M634_21450 fec89e3d343c79c3ed28a970dd797360 70 SMART SM00357 6 70 1.6E-27 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 M634_10550 cdf5182074dc3f9c1f17c6ddc3cd4757 96 Gene3D G3DSA:3.30.2310.20 1 95 2.0E-29 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily M634_10550 cdf5182074dc3f9c1f17c6ddc3cd4757 96 SUPERFAMILY SSF143011 1 82 3.92E-23 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily M634_10550 cdf5182074dc3f9c1f17c6ddc3cd4757 96 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 84 5.7E-11 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family M634_10550 cdf5182074dc3f9c1f17c6ddc3cd4757 96 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 84 1.5E-13 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family M634_15210 ed3bc62df98a7eda4b6c3a716fe63687 347 Gene3D G3DSA:3.30.2340.10 170 302 2.7E-106 T 12-10-2018 M634_15210 ed3bc62df98a7eda4b6c3a716fe63687 347 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 78 91 - T 12-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 M634_15210 ed3bc62df98a7eda4b6c3a716fe63687 347 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 9 170 1.9E-42 T 12-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 M634_15210 ed3bc62df98a7eda4b6c3a716fe63687 347 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 187 337 6.0E-22 T 12-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 M634_15210 ed3bc62df98a7eda4b6c3a716fe63687 347 Gene3D G3DSA:3.30.2350.20 18 337 2.7E-106 T 12-10-2018 M634_15210 ed3bc62df98a7eda4b6c3a716fe63687 347 SUPERFAMILY SSF55120 6 339 3.45E-98 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 M634_15210 ed3bc62df98a7eda4b6c3a716fe63687 347 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 6 342 28.899 T 12-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 M634_13690 5397bff4f825b40bedc0ae170e05d253 376 PRINTS PR00207 Flagellin signature 37 54 3.4E-26 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 M634_13690 5397bff4f825b40bedc0ae170e05d253 376 PRINTS PR00207 Flagellin signature 111 134 3.4E-26 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 M634_13690 5397bff4f825b40bedc0ae170e05d253 376 PRINTS PR00207 Flagellin signature 76 95 3.4E-26 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 M634_13690 5397bff4f825b40bedc0ae170e05d253 376 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 2.3E-41 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 M634_13690 5397bff4f825b40bedc0ae170e05d253 376 Pfam PF00700 Bacterial flagellin C-terminal helical region 291 375 8.7E-26 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 M634_13690 5397bff4f825b40bedc0ae170e05d253 376 Gene3D G3DSA:1.20.1330.10 44 326 5.5E-77 T 12-10-2018 M634_13690 5397bff4f825b40bedc0ae170e05d253 376 Gene3D G3DSA:3.30.70.2120 174 274 5.5E-77 T 12-10-2018 M634_13690 5397bff4f825b40bedc0ae170e05d253 376 Pfam PF07196 Flagellin hook IN motif 196 247 2.8E-9 T 12-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 M634_13690 5397bff4f825b40bedc0ae170e05d253 376 SUPERFAMILY SSF64518 1 375 1.44E-94 T 12-10-2018 M634_13690 5397bff4f825b40bedc0ae170e05d253 376 Gene3D G3DSA:1.10.8.410 327 375 2.8E-20 T 12-10-2018 M634_11230 1af636a537fc15bf6c32b11c518cfaab 195 Gene3D G3DSA:1.10.3210.10 1 195 6.9E-52 T 12-10-2018 M634_11230 1af636a537fc15bf6c32b11c518cfaab 195 SUPERFAMILY SSF109604 4 182 9.42E-42 T 12-10-2018 M634_11230 1af636a537fc15bf6c32b11c518cfaab 195 Pfam PF13023 HD domain 15 172 4.4E-50 T 12-10-2018 IPR006674 HD domain M634_09075 2bc4cb163a52adb9536ff905dedbe274 152 Pfam PF05932 Tir chaperone protein (CesT) family 7 126 2.9E-27 T 12-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 M634_09075 2bc4cb163a52adb9536ff905dedbe274 152 SUPERFAMILY SSF69635 1 147 9.03E-36 T 12-10-2018 M634_09075 2bc4cb163a52adb9536ff905dedbe274 152 Gene3D G3DSA:3.30.1460.10 1 131 2.4E-19 T 12-10-2018 M634_17715 5c232983c8171b798fd58380eee83e11 150 Pfam PF04519 Polymer-forming cytoskeletal 18 112 3.8E-24 T 12-10-2018 IPR007607 Bactofilin A/B M634_09700 ddcd24b044a64580cbb519cfe8b1f590 299 Pfam PF15575 Immunity protein 49 77 283 4.8E-43 T 12-10-2018 IPR029074 Immunity protein 49 M634_20580 b80e0c1b46bcfedb64882ea779d9f440 204 ProSitePatterns PS00622 LuxR-type HTH domain signature. 156 183 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_20580 b80e0c1b46bcfedb64882ea779d9f440 204 SUPERFAMILY SSF46894 124 198 8.16E-21 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M634_20580 b80e0c1b46bcfedb64882ea779d9f440 204 Pfam PF00072 Response regulator receiver domain 1 111 5.2E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_20580 b80e0c1b46bcfedb64882ea779d9f440 204 SMART SM00421 139 196 8.6E-23 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_20580 b80e0c1b46bcfedb64882ea779d9f440 204 SMART SM00448 1 111 5.4E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_20580 b80e0c1b46bcfedb64882ea779d9f440 204 Gene3D G3DSA:3.40.50.12740 1 199 2.1E-64 T 12-10-2018 M634_20580 b80e0c1b46bcfedb64882ea779d9f440 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 4.4E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_20580 b80e0c1b46bcfedb64882ea779d9f440 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 4.4E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_20580 b80e0c1b46bcfedb64882ea779d9f440 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 4.4E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_20580 b80e0c1b46bcfedb64882ea779d9f440 204 SUPERFAMILY SSF52172 1 128 1.42E-32 T 12-10-2018 IPR011006 CheY-like superfamily M634_20580 b80e0c1b46bcfedb64882ea779d9f440 204 Pfam PF00196 Bacterial regulatory proteins, luxR family 140 195 4.0E-22 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_10515 74c131ad9c0ff041a46b24588ccdba77 483 Gene3D G3DSA:3.30.870.10 267 459 1.1E-25 T 12-10-2018 M634_10515 74c131ad9c0ff041a46b24588ccdba77 483 SMART SM00155 152 179 5.4 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 M634_10515 74c131ad9c0ff041a46b24588ccdba77 483 SMART SM00155 378 405 3.3E-6 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 M634_10515 74c131ad9c0ff041a46b24588ccdba77 483 SUPERFAMILY SSF56024 264 432 7.85E-20 T 12-10-2018 M634_10515 74c131ad9c0ff041a46b24588ccdba77 483 PIRSF PIRSF000850 141 222 20.0 T 12-10-2018 M634_10515 74c131ad9c0ff041a46b24588ccdba77 483 PIRSF PIRSF000850 286 442 0.0016 T 12-10-2018 M634_10515 74c131ad9c0ff041a46b24588ccdba77 483 PIRSF PIRSF000850 30 108 0.65 T 12-10-2018 M634_10515 74c131ad9c0ff041a46b24588ccdba77 483 Gene3D G3DSA:3.30.870.10 33 244 6.1E-32 T 12-10-2018 M634_10515 74c131ad9c0ff041a46b24588ccdba77 483 SUPERFAMILY SSF56024 40 219 5.5E-34 T 12-10-2018 M634_10515 74c131ad9c0ff041a46b24588ccdba77 483 Pfam PF13091 PLD-like domain 60 211 1.0E-15 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 M634_10515 74c131ad9c0ff041a46b24588ccdba77 483 Pfam PF13091 PLD-like domain 297 429 3.5E-14 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 M634_15355 3ffdc54628a9a361b7228117933c7e51 192 SUPERFAMILY SSF101327 6 178 4.18E-46 T 12-10-2018 IPR036255 YgfB-like superfamily M634_15355 3ffdc54628a9a361b7228117933c7e51 192 Pfam PF03695 Uncharacterised protein family (UPF0149) 12 179 5.5E-36 T 12-10-2018 IPR011978 Uncharacterised protein family UPF0149 M634_15355 3ffdc54628a9a361b7228117933c7e51 192 Gene3D G3DSA:1.20.120.740 4 192 2.3E-50 T 12-10-2018 M634_15355 3ffdc54628a9a361b7228117933c7e51 192 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 5 190 33.015 T 12-10-2018 IPR011978 Uncharacterised protein family UPF0149 M634_04105 1e27d5550c8736079953e2adabe004c7 196 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 5 40 1.0E-13 T 12-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 M634_04105 1e27d5550c8736079953e2adabe004c7 196 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 190 2.4E-74 T 12-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 M634_04105 1e27d5550c8736079953e2adabe004c7 196 Gene3D G3DSA:2.102.10.10 43 190 4.2E-47 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 M634_04105 1e27d5550c8736079953e2adabe004c7 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 162 174 3.0E-7 T 12-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 M634_04105 1e27d5550c8736079953e2adabe004c7 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 149 161 3.0E-7 T 12-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 M634_04105 1e27d5550c8736079953e2adabe004c7 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 130 3.0E-7 T 12-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 M634_04105 1e27d5550c8736079953e2adabe004c7 196 Pfam PF00355 Rieske [2Fe-2S] domain 55 174 2.7E-11 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 M634_04105 1e27d5550c8736079953e2adabe004c7 196 SUPERFAMILY SSF50022 30 189 7.26E-43 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 M634_23155 ffdfb8e0f482711fc03890d45bb69dae 111 Gene3D G3DSA:1.20.120.160 1 111 6.9E-12 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 M634_23155 ffdfb8e0f482711fc03890d45bb69dae 111 SUPERFAMILY SSF47226 1 110 2.36E-17 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 M634_11950 57df2bf71c03160bc5916c19ec11c4d8 588 Hamap MF_00203 UvrABC system protein C [uvrC]. 1 585 26.818 T 12-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 M634_11950 57df2bf71c03160bc5916c19ec11c4d8 588 Gene3D G3DSA:1.10.150.20 533 588 1.0E-24 T 12-10-2018 M634_11950 57df2bf71c03160bc5916c19ec11c4d8 588 SUPERFAMILY SSF47781 499 587 3.18E-19 T 12-10-2018 IPR010994 RuvA domain 2-like M634_11950 57df2bf71c03160bc5916c19ec11c4d8 588 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 1 567 1.2E-208 T 12-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 M634_11950 57df2bf71c03160bc5916c19ec11c4d8 588 Pfam PF14520 Helix-hairpin-helix domain 536 587 3.0E-9 T 12-10-2018 M634_11950 57df2bf71c03160bc5916c19ec11c4d8 588 SMART SM00465 1 76 3.4E-15 T 12-10-2018 IPR000305 GIY-YIG endonuclease M634_11950 57df2bf71c03160bc5916c19ec11c4d8 588 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 365 520 3.1E-43 T 12-10-2018 IPR001162 UvrC family homology region M634_11950 57df2bf71c03160bc5916c19ec11c4d8 588 Pfam PF01541 GIY-YIG catalytic domain 2 71 2.1E-9 T 12-10-2018 IPR000305 GIY-YIG endonuclease M634_11950 57df2bf71c03160bc5916c19ec11c4d8 588 SUPERFAMILY SSF82771 2 78 4.97E-19 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 M634_11950 57df2bf71c03160bc5916c19ec11c4d8 588 Pfam PF02151 UvrB/uvrC motif 183 216 1.2E-8 T 12-10-2018 IPR001943 UVR domain GO:0005515 M634_11950 57df2bf71c03160bc5916c19ec11c4d8 588 Gene3D G3DSA:3.40.1440.10 1 80 4.6E-25 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 M634_11950 57df2bf71c03160bc5916c19ec11c4d8 588 SMART SM00278 534 553 0.24 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 M634_11950 57df2bf71c03160bc5916c19ec11c4d8 588 SMART SM00278 566 585 300.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 M634_11950 57df2bf71c03160bc5916c19ec11c4d8 588 Gene3D G3DSA:3.30.420.340 358 530 2.1E-45 T 12-10-2018 IPR038476 UvrC homology region 2 superfamily M634_11950 57df2bf71c03160bc5916c19ec11c4d8 588 SUPERFAMILY SSF46600 168 221 3.27E-13 T 12-10-2018 IPR036876 UVR domain superfamily M634_00490 7cd68b349240c22cfe073d5b29f01495 835 SUPERFAMILY SSF50249 145 244 2.1E-16 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_00490 7cd68b349240c22cfe073d5b29f01495 835 Pfam PF08206 Ribonuclease B OB domain 91 151 5.3E-22 T 12-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain M634_00490 7cd68b349240c22cfe073d5b29f01495 835 SUPERFAMILY SSF50249 71 154 1.46E-15 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_00490 7cd68b349240c22cfe073d5b29f01495 835 ProSitePatterns PS01175 Ribonuclease II family signature. 562 586 - T 12-10-2018 IPR022966 Ribonuclease II/R, conserved site M634_00490 7cd68b349240c22cfe073d5b29f01495 835 Pfam PF00773 RNB domain 267 594 3.1E-109 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 M634_00490 7cd68b349240c22cfe073d5b29f01495 835 SMART SM00357 90 152 3.6E-14 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 M634_00490 7cd68b349240c22cfe073d5b29f01495 835 Pfam PF08461 Ribonuclease R winged-helix domain 27 88 6.9E-12 T 12-10-2018 IPR013668 Ribonuclease R winged-helix domain M634_00490 7cd68b349240c22cfe073d5b29f01495 835 Gene3D G3DSA:2.40.50.140 653 764 3.6E-27 T 12-10-2018 M634_00490 7cd68b349240c22cfe073d5b29f01495 835 TIGRFAM TIGR02063 RNase_R: ribonuclease R 23 734 2.2E-275 T 12-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 M634_00490 7cd68b349240c22cfe073d5b29f01495 835 SUPERFAMILY SSF50249 651 742 2.31E-22 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_00490 7cd68b349240c22cfe073d5b29f01495 835 SMART SM00316 650 733 6.9E-15 T 12-10-2018 IPR022967 RNA-binding domain, S1 M634_00490 7cd68b349240c22cfe073d5b29f01495 835 Pfam PF00575 S1 RNA binding domain 650 731 1.3E-13 T 12-10-2018 IPR003029 S1 domain GO:0003676 M634_00490 7cd68b349240c22cfe073d5b29f01495 835 Gene3D G3DSA:2.40.50.140 77 155 1.3E-11 T 12-10-2018 M634_00490 7cd68b349240c22cfe073d5b29f01495 835 Hamap MF_01895 Ribonuclease R [rnr]. 42 733 59.39 T 12-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 M634_00490 7cd68b349240c22cfe073d5b29f01495 835 SMART SM00955 267 595 1.6E-186 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 M634_00490 7cd68b349240c22cfe073d5b29f01495 835 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 71 733 4.9E-257 T 12-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 M634_00490 7cd68b349240c22cfe073d5b29f01495 835 SUPERFAMILY SSF50249 227 650 3.08E-144 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_01215 cbd8759373c58a478b09a74eb66eabcd 369 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 350 360 - T 12-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site M634_01215 cbd8759373c58a478b09a74eb66eabcd 369 SUPERFAMILY SSF53335 10 367 2.33E-57 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_01215 cbd8759373c58a478b09a74eb66eabcd 369 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 10 368 7.9E-194 T 12-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 M634_01215 cbd8759373c58a478b09a74eb66eabcd 369 Gene3D G3DSA:3.40.50.150 13 364 2.0E-141 T 12-10-2018 M634_01215 cbd8759373c58a478b09a74eb66eabcd 369 Gene3D G3DSA:3.40.1350.30 45 189 2.0E-141 T 12-10-2018 M634_01215 cbd8759373c58a478b09a74eb66eabcd 369 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 301 330 - T 12-10-2018 IPR030390 RNA methyltransferase TrmA, active site M634_01215 cbd8759373c58a478b09a74eb66eabcd 369 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 11 368 5.5E-190 T 12-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 M634_01215 cbd8759373c58a478b09a74eb66eabcd 369 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 368 45.216 T 12-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 M634_09250 bd0bb312a858d68dc99b1dacff530bff 160 Pfam PF00583 Acetyltransferase (GNAT) family 30 146 1.8E-16 T 12-10-2018 IPR000182 GNAT domain M634_09250 bd0bb312a858d68dc99b1dacff530bff 160 SUPERFAMILY SSF55729 4 147 1.13E-26 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_09250 bd0bb312a858d68dc99b1dacff530bff 160 Gene3D G3DSA:3.40.630.30 3 137 2.4E-31 T 12-10-2018 M634_05575 bcea0f56ee7ebcdeeb20919e8ba29373 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 8.1E-201 T 12-10-2018 M634_05575 bcea0f56ee7ebcdeeb20919e8ba29373 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 73.25 T 12-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 M634_05575 bcea0f56ee7ebcdeeb20919e8ba29373 474 Pfam PF04055 Radical SAM superfamily 151 325 1.2E-27 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 M634_05575 bcea0f56ee7ebcdeeb20919e8ba29373 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 6.3E-154 T 12-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 M634_05575 bcea0f56ee7ebcdeeb20919e8ba29373 474 Pfam PF01938 TRAM domain 379 440 3.6E-18 T 12-10-2018 IPR002792 TRAM domain M634_05575 bcea0f56ee7ebcdeeb20919e8ba29373 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 12-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 M634_05575 bcea0f56ee7ebcdeeb20919e8ba29373 474 Gene3D G3DSA:3.80.30.20 145 377 5.2E-84 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe M634_05575 bcea0f56ee7ebcdeeb20919e8ba29373 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 6.8E-30 T 12-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 M634_05575 bcea0f56ee7ebcdeeb20919e8ba29373 474 SMART SM00729 147 367 3.0E-63 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 M634_05575 bcea0f56ee7ebcdeeb20919e8ba29373 474 SUPERFAMILY SSF102114 122 374 1.03E-61 T 12-10-2018 M634_05575 bcea0f56ee7ebcdeeb20919e8ba29373 474 Gene3D G3DSA:3.40.50.12160 3 138 1.9E-34 T 12-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily M634_09110 0c45b82741463ca484032c85aa89e73b 321 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 246 313 1.4E-20 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) M634_09110 0c45b82741463ca484032c85aa89e73b 321 TIGRFAM TIGR02551 SpaO_YscQ: type III secretion apparatus protein, YscQ/HrcQ family 39 313 6.8E-73 T 12-10-2018 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO GO:0030254 M634_09110 0c45b82741463ca484032c85aa89e73b 321 SUPERFAMILY SSF101801 242 317 8.11E-20 T 12-10-2018 IPR036429 SpoA-like superfamily M634_09110 0c45b82741463ca484032c85aa89e73b 321 Gene3D G3DSA:2.30.330.10 230 318 1.1E-27 T 12-10-2018 IPR036429 SpoA-like superfamily M634_09110 0c45b82741463ca484032c85aa89e73b 321 SUPERFAMILY SSF101801 160 219 1.83E-7 T 12-10-2018 IPR036429 SpoA-like superfamily M634_09110 0c45b82741463ca484032c85aa89e73b 321 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 246 258 1.6E-7 T 12-10-2018 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 M634_09110 0c45b82741463ca484032c85aa89e73b 321 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 290 307 1.6E-7 T 12-10-2018 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 M634_09110 0c45b82741463ca484032c85aa89e73b 321 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 184 194 1.6E-7 T 12-10-2018 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 M634_07585 bdd61b49b2eec451e7dff55d5ef28f57 135 PIRSF PIRSF002096 1 135 2.3E-55 T 12-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 M634_07585 bdd61b49b2eec451e7dff55d5ef28f57 135 Pfam PF00816 H-NS histone family 32 129 7.5E-20 T 12-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 M634_07585 bdd61b49b2eec451e7dff55d5ef28f57 135 Gene3D G3DSA:1.10.287.1050 1 95 1.4E-29 T 12-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 M634_07585 bdd61b49b2eec451e7dff55d5ef28f57 135 SMART SM00528 88 135 6.4E-26 T 12-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 M634_07585 bdd61b49b2eec451e7dff55d5ef28f57 135 SUPERFAMILY SSF81273 93 135 2.12E-12 T 12-10-2018 M634_07585 bdd61b49b2eec451e7dff55d5ef28f57 135 Gene3D G3DSA:4.10.430.10 96 135 9.8E-26 T 12-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 M634_07585 bdd61b49b2eec451e7dff55d5ef28f57 135 SUPERFAMILY SSF81273 2 58 1.0E-16 T 12-10-2018 M634_01650 ea6509964cc0ff2887449c1983346d65 257 SUPERFAMILY SSF110399 3 238 6.54E-87 T 12-10-2018 M634_01650 ea6509964cc0ff2887449c1983346d65 257 Pfam PF05690 Thiazole biosynthesis protein ThiG 5 249 5.7E-111 T 12-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 M634_01650 ea6509964cc0ff2887449c1983346d65 257 Hamap MF_00443 Thiazole synthase [thiG]. 3 255 43.251 T 12-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 M634_01650 ea6509964cc0ff2887449c1983346d65 257 Gene3D G3DSA:3.20.20.70 1 255 7.7E-112 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_03025 598bcbabd702ed23dadb46f099937c6c 365 PIRSF PIRSF000390 1 365 6.1E-100 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase M634_03025 598bcbabd702ed23dadb46f099937c6c 365 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 14 362 5.2E-116 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase M634_03025 598bcbabd702ed23dadb46f099937c6c 365 SUPERFAMILY SSF53383 12 365 1.11E-105 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_03025 598bcbabd702ed23dadb46f099937c6c 365 Gene3D G3DSA:3.90.1150.10 249 365 2.7E-34 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M634_03025 598bcbabd702ed23dadb46f099937c6c 365 Gene3D G3DSA:3.40.640.10 1 247 2.2E-83 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_20655 f15a64ba35cb7101d7e288d598805920 316 TIGRFAM TIGR00874 talAB: transaldolase 3 316 1.1E-154 T 12-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 M634_20655 f15a64ba35cb7101d7e288d598805920 316 Hamap MF_00492 Transaldolase [tal]. 2 316 50.929 T 12-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 M634_20655 f15a64ba35cb7101d7e288d598805920 316 SUPERFAMILY SSF51569 1 315 4.19E-114 T 12-10-2018 M634_20655 f15a64ba35cb7101d7e288d598805920 316 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 12-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 M634_20655 f15a64ba35cb7101d7e288d598805920 316 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 312 2.7E-101 T 12-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 M634_20655 f15a64ba35cb7101d7e288d598805920 316 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 12-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 M634_20655 f15a64ba35cb7101d7e288d598805920 316 Gene3D G3DSA:3.20.20.70 2 316 1.0E-138 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_04830 89e3d13ae9354bd3c74a711b182117ff 382 Gene3D G3DSA:2.40.10.10 33 155 1.9E-18 T 12-10-2018 M634_04830 89e3d13ae9354bd3c74a711b182117ff 382 Gene3D G3DSA:2.40.10.10 156 314 7.9E-24 T 12-10-2018 M634_04830 89e3d13ae9354bd3c74a711b182117ff 382 SMART SM00020 20 311 6.5E-26 T 12-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 M634_04830 89e3d13ae9354bd3c74a711b182117ff 382 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 360 380 5.8E-4 T 12-10-2018 IPR020008 GlyGly-CTERM domain M634_04830 89e3d13ae9354bd3c74a711b182117ff 382 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 48 63 9.2E-16 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 M634_04830 89e3d13ae9354bd3c74a711b182117ff 382 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 259 271 9.2E-16 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 M634_04830 89e3d13ae9354bd3c74a711b182117ff 382 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 132 146 9.2E-16 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 M634_04830 89e3d13ae9354bd3c74a711b182117ff 382 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 260 271 - T 12-10-2018 IPR033116 Serine proteases, trypsin family, serine active site M634_04830 89e3d13ae9354bd3c74a711b182117ff 382 SUPERFAMILY SSF50494 44 316 5.75E-42 T 12-10-2018 IPR009003 Peptidase S1, PA clan M634_04830 89e3d13ae9354bd3c74a711b182117ff 382 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 58 63 - T 12-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 M634_04830 89e3d13ae9354bd3c74a711b182117ff 382 Pfam PF00089 Trypsin 44 311 4.4E-28 T 12-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 M634_03805 347abd824554578cea50c1f7b32a48c3 641 Gene3D G3DSA:3.30.450.20 226 328 1.7E-19 T 12-10-2018 M634_03805 347abd824554578cea50c1f7b32a48c3 641 Pfam PF02954 Bacterial regulatory protein, Fis family 591 632 1.1E-9 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M634_03805 347abd824554578cea50c1f7b32a48c3 641 SUPERFAMILY SSF55785 220 307 2.27E-7 T 12-10-2018 IPR035965 PAS domain superfamily M634_03805 347abd824554578cea50c1f7b32a48c3 641 Pfam PF00158 Sigma-54 interaction domain 342 497 8.2E-33 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 M634_03805 347abd824554578cea50c1f7b32a48c3 641 Gene3D G3DSA:3.30.450.40 18 202 6.9E-46 T 12-10-2018 IPR029016 GAF-like domain superfamily M634_03805 347abd824554578cea50c1f7b32a48c3 641 SUPERFAMILY SSF46689 581 634 9.86E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_03805 347abd824554578cea50c1f7b32a48c3 641 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 362 375 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M634_03805 347abd824554578cea50c1f7b32a48c3 641 Gene3D G3DSA:1.10.8.60 504 579 3.4E-15 T 12-10-2018 M634_03805 347abd824554578cea50c1f7b32a48c3 641 Gene3D G3DSA:3.40.50.300 329 503 1.4E-41 T 12-10-2018 M634_03805 347abd824554578cea50c1f7b32a48c3 641 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 418 433 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M634_03805 347abd824554578cea50c1f7b32a48c3 641 SUPERFAMILY SSF52540 342 574 3.32E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_03805 347abd824554578cea50c1f7b32a48c3 641 Pfam PF00989 PAS fold 221 308 2.7E-5 T 12-10-2018 IPR013767 PAS fold GO:0006355 M634_03805 347abd824554578cea50c1f7b32a48c3 641 Gene3D G3DSA:1.10.10.60 591 634 1.8E-12 T 12-10-2018 M634_13840 5b2d4f35a9c7e5a1bd87511583a2ccbc 814 Gene3D G3DSA:2.40.110.10 237 360 6.2E-98 T 12-10-2018 M634_13840 5b2d4f35a9c7e5a1bd87511583a2ccbc 814 Gene3D G3DSA:1.20.140.10 361 508 6.2E-98 T 12-10-2018 M634_13840 5b2d4f35a9c7e5a1bd87511583a2ccbc 814 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 148 234 3.0E-15 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 M634_13840 5b2d4f35a9c7e5a1bd87511583a2ccbc 814 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 361 508 4.9E-13 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 M634_13840 5b2d4f35a9c7e5a1bd87511583a2ccbc 814 Gene3D G3DSA:1.10.540.10 123 236 6.2E-98 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 M634_13840 5b2d4f35a9c7e5a1bd87511583a2ccbc 814 SUPERFAMILY SSF56645 122 356 2.88E-42 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 M634_13840 5b2d4f35a9c7e5a1bd87511583a2ccbc 814 SUPERFAMILY SSF47203 361 508 4.03E-22 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 M634_13840 5b2d4f35a9c7e5a1bd87511583a2ccbc 814 Pfam PF09317 Domain of unknown function (DUF1974) 515 796 2.1E-115 T 12-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 M634_23260 299643376abb2988aeb1e6faa75be0d0 413 Gene3D G3DSA:1.10.287.130 172 285 8.2E-11 T 12-10-2018 M634_23260 299643376abb2988aeb1e6faa75be0d0 413 Gene3D G3DSA:3.30.565.10 295 413 2.0E-6 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_23260 299643376abb2988aeb1e6faa75be0d0 413 Pfam PF00512 His Kinase A (phospho-acceptor) domain 222 282 1.3E-7 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_23260 299643376abb2988aeb1e6faa75be0d0 413 SUPERFAMILY SSF47384 205 282 3.34E-10 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M634_23260 299643376abb2988aeb1e6faa75be0d0 413 SUPERFAMILY SSF55874 298 400 1.1E-9 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_23260 299643376abb2988aeb1e6faa75be0d0 413 SMART SM00388 220 286 8.2E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_02195 a1f05e70ddcfafa66b27dd08b606309a 671 Gene3D G3DSA:3.40.50.300 274 634 8.7E-124 T 12-10-2018 M634_02195 a1f05e70ddcfafa66b27dd08b606309a 671 Gene3D G3DSA:3.40.50.300 4 266 1.8E-100 T 12-10-2018 M634_02195 a1f05e70ddcfafa66b27dd08b606309a 671 Pfam PF13361 UvrD-like helicase C-terminal domain 271 615 1.3E-73 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 M634_02195 a1f05e70ddcfafa66b27dd08b606309a 671 SUPERFAMILY SSF52540 1 640 6.29E-163 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_02195 a1f05e70ddcfafa66b27dd08b606309a 671 Gene3D G3DSA:1.10.10.160 108 181 1.8E-100 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily M634_02195 a1f05e70ddcfafa66b27dd08b606309a 671 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 670 40.905 T 12-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 M634_02195 a1f05e70ddcfafa66b27dd08b606309a 671 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 8.8E-78 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 M634_02195 a1f05e70ddcfafa66b27dd08b606309a 671 Gene3D G3DSA:1.10.486.10 377 546 8.7E-124 T 12-10-2018 M634_02195 a1f05e70ddcfafa66b27dd08b606309a 671 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 669 0.0 T 12-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 M634_23765 202f38a794b36615d5e653ec5b67bf2a 480 Gene3D G3DSA:3.40.190.10 125 221 1.7E-31 T 12-10-2018 M634_23765 202f38a794b36615d5e653ec5b67bf2a 480 Pfam PF00990 Diguanylate cyclase, GGDEF domain 311 460 2.1E-33 T 12-10-2018 IPR000160 GGDEF domain M634_23765 202f38a794b36615d5e653ec5b67bf2a 480 Gene3D G3DSA:3.40.190.10 40 258 1.7E-31 T 12-10-2018 M634_23765 202f38a794b36615d5e653ec5b67bf2a 480 SUPERFAMILY SSF55073 315 463 2.9E-36 T 12-10-2018 IPR029787 Nucleotide cyclase M634_23765 202f38a794b36615d5e653ec5b67bf2a 480 SMART SM00267 299 465 3.2E-43 T 12-10-2018 IPR000160 GGDEF domain M634_23765 202f38a794b36615d5e653ec5b67bf2a 480 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 309 463 1.9E-30 T 12-10-2018 IPR000160 GGDEF domain M634_23765 202f38a794b36615d5e653ec5b67bf2a 480 SUPERFAMILY SSF53850 41 259 6.71E-35 T 12-10-2018 M634_23765 202f38a794b36615d5e653ec5b67bf2a 480 SMART SM00062 40 262 1.6E-4 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M634_23765 202f38a794b36615d5e653ec5b67bf2a 480 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 258 2.5E-25 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M634_23765 202f38a794b36615d5e653ec5b67bf2a 480 Gene3D G3DSA:3.30.70.270 300 466 2.6E-41 T 12-10-2018 M634_12860 bbf96b81fc3521e656f2baa37947ec99 900 PIRSF PIRSF000111 1 865 0.0 T 12-10-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 M634_12860 bbf96b81fc3521e656f2baa37947ec99 900 Gene3D G3DSA:3.40.50.1970 456 642 9.9E-58 T 12-10-2018 M634_12860 bbf96b81fc3521e656f2baa37947ec99 900 Gene3D G3DSA:1.20.1090.10 643 864 4.0E-59 T 12-10-2018 M634_12860 bbf96b81fc3521e656f2baa37947ec99 900 Gene3D G3DSA:3.40.605.10 399 455 1.7E-7 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 M634_12860 bbf96b81fc3521e656f2baa37947ec99 900 Pfam PF00171 Aldehyde dehydrogenase family 4 402 2.0E-25 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 M634_12860 bbf96b81fc3521e656f2baa37947ec99 900 Gene3D G3DSA:3.40.605.10 15 216 2.3E-170 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 M634_12860 bbf96b81fc3521e656f2baa37947ec99 900 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 631 659 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 M634_12860 bbf96b81fc3521e656f2baa37947ec99 900 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 719 739 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 M634_12860 bbf96b81fc3521e656f2baa37947ec99 900 Pfam PF00465 Iron-containing alcohol dehydrogenase 458 849 1.0E-111 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 M634_12860 bbf96b81fc3521e656f2baa37947ec99 900 SUPERFAMILY SSF53720 5 454 1.7E-84 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 M634_12860 bbf96b81fc3521e656f2baa37947ec99 900 Gene3D G3DSA:3.40.309.10 217 398 2.3E-170 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 M634_12860 bbf96b81fc3521e656f2baa37947ec99 900 SUPERFAMILY SSF56796 452 863 2.49E-114 T 12-10-2018 M634_13760 a53019b1f1820d8f6dc76c972429c83f 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 65.69 T 12-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 M634_13760 a53019b1f1820d8f6dc76c972429c83f 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 12-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 M634_13760 a53019b1f1820d8f6dc76c972429c83f 292 PIRSF PIRSF001365 1 292 9.8E-97 T 12-10-2018 IPR002220 DapA-like GO:0016829 M634_13760 a53019b1f1820d8f6dc76c972429c83f 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 8.4E-36 T 12-10-2018 IPR002220 DapA-like GO:0016829 M634_13760 a53019b1f1820d8f6dc76c972429c83f 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 8.4E-36 T 12-10-2018 IPR002220 DapA-like GO:0016829 M634_13760 a53019b1f1820d8f6dc76c972429c83f 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 8.4E-36 T 12-10-2018 IPR002220 DapA-like GO:0016829 M634_13760 a53019b1f1820d8f6dc76c972429c83f 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 8.4E-36 T 12-10-2018 IPR002220 DapA-like GO:0016829 M634_13760 a53019b1f1820d8f6dc76c972429c83f 292 Gene3D G3DSA:3.20.20.70 1 292 5.6E-111 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_13760 a53019b1f1820d8f6dc76c972429c83f 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 12-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 M634_13760 a53019b1f1820d8f6dc76c972429c83f 292 SMART SM01130 1 290 2.1E-142 T 12-10-2018 IPR002220 DapA-like GO:0016829 M634_13760 a53019b1f1820d8f6dc76c972429c83f 292 SUPERFAMILY SSF51569 2 290 3.66E-101 T 12-10-2018 M634_13760 a53019b1f1820d8f6dc76c972429c83f 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 288 1.4E-118 T 12-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 M634_13760 a53019b1f1820d8f6dc76c972429c83f 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 287 8.1E-110 T 12-10-2018 IPR002220 DapA-like GO:0016829 M634_02420 221edd3b6ff04cee70e14edbdcca5857 143 Gene3D G3DSA:1.20.120.520 1 139 2.5E-10 T 12-10-2018 M634_02420 221edd3b6ff04cee70e14edbdcca5857 143 Pfam PF01814 Hemerythrin HHE cation binding domain 4 121 8.8E-12 T 12-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 M634_09330 b3f5d0d6c1d3ecc7b62881970721a88d 90 SUPERFAMILY SSF54975 4 89 8.07E-28 T 12-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 M634_09330 b3f5d0d6c1d3ecc7b62881970721a88d 90 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 12-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 M634_09330 b3f5d0d6c1d3ecc7b62881970721a88d 90 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 12-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 M634_09330 b3f5d0d6c1d3ecc7b62881970721a88d 90 Gene3D G3DSA:3.30.70.100 1 90 2.7E-30 T 12-10-2018 M634_09330 b3f5d0d6c1d3ecc7b62881970721a88d 90 Pfam PF00708 Acylphosphatase 7 89 8.0E-25 T 12-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 M634_04945 0b506d86d4c0e9db8425f5c07cf76e3a 386 SMART SM00564 191 223 330.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat M634_04945 0b506d86d4c0e9db8425f5c07cf76e3a 386 SMART SM00564 107 138 0.013 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat M634_04945 0b506d86d4c0e9db8425f5c07cf76e3a 386 SMART SM00564 243 274 80.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat M634_04945 0b506d86d4c0e9db8425f5c07cf76e3a 386 SMART SM00564 322 353 0.0084 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat M634_04945 0b506d86d4c0e9db8425f5c07cf76e3a 386 SMART SM00564 63 94 9.8E-6 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat M634_04945 0b506d86d4c0e9db8425f5c07cf76e3a 386 SMART SM00564 147 178 0.25 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat M634_04945 0b506d86d4c0e9db8425f5c07cf76e3a 386 SMART SM00564 280 312 42.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat M634_04945 0b506d86d4c0e9db8425f5c07cf76e3a 386 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 7 382 1.3E-143 T 12-10-2018 IPR017687 Outer membrane protein assembly factor BamB M634_04945 0b506d86d4c0e9db8425f5c07cf76e3a 386 Pfam PF13360 PQQ-like domain 76 310 1.2E-51 T 12-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat M634_04945 0b506d86d4c0e9db8425f5c07cf76e3a 386 SUPERFAMILY SSF50998 31 375 5.65E-82 T 12-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily M634_04945 0b506d86d4c0e9db8425f5c07cf76e3a 386 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 3 384 40.926 T 12-10-2018 IPR017687 Outer membrane protein assembly factor BamB M634_04945 0b506d86d4c0e9db8425f5c07cf76e3a 386 Gene3D G3DSA:2.130.10.10 18 385 1.2E-98 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 M634_23550 1169c897d05ae13cd322430bbf67be73 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 31 90 1.3E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_23550 1169c897d05ae13cd322430bbf67be73 311 SUPERFAMILY SSF46785 27 107 2.45E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_23550 1169c897d05ae13cd322430bbf67be73 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 4.1E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_23550 1169c897d05ae13cd322430bbf67be73 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 57 67 4.1E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_23550 1169c897d05ae13cd322430bbf67be73 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 67 78 4.1E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_23550 1169c897d05ae13cd322430bbf67be73 311 SUPERFAMILY SSF53850 109 301 4.34E-24 T 12-10-2018 M634_23550 1169c897d05ae13cd322430bbf67be73 311 Gene3D G3DSA:3.40.190.10 134 297 1.0E-19 T 12-10-2018 M634_23550 1169c897d05ae13cd322430bbf67be73 311 Pfam PF03466 LysR substrate binding domain 140 296 5.0E-10 T 12-10-2018 IPR005119 LysR, substrate-binding M634_23550 1169c897d05ae13cd322430bbf67be73 311 Gene3D G3DSA:1.10.10.10 22 110 3.6E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_23550 1169c897d05ae13cd322430bbf67be73 311 Gene3D G3DSA:3.40.190.10 176 274 1.0E-19 T 12-10-2018 M634_21490 9a1443bdcbfd6fac63860f405253731b 285 Pfam PF00561 alpha/beta hydrolase fold 31 143 3.4E-27 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 M634_21490 9a1443bdcbfd6fac63860f405253731b 285 SUPERFAMILY SSF53474 12 283 3.82E-62 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_21490 9a1443bdcbfd6fac63860f405253731b 285 Gene3D G3DSA:3.40.50.1820 5 281 1.9E-69 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_21490 9a1443bdcbfd6fac63860f405253731b 285 PRINTS PR00412 Epoxide hydrolase signature 36 54 4.7E-21 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 M634_21490 9a1443bdcbfd6fac63860f405253731b 285 PRINTS PR00412 Epoxide hydrolase signature 258 280 4.7E-21 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 M634_21490 9a1443bdcbfd6fac63860f405253731b 285 PRINTS PR00412 Epoxide hydrolase signature 102 115 4.7E-21 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 M634_21490 9a1443bdcbfd6fac63860f405253731b 285 PRINTS PR00412 Epoxide hydrolase signature 56 71 4.7E-21 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 M634_21490 9a1443bdcbfd6fac63860f405253731b 285 PRINTS PR00412 Epoxide hydrolase signature 116 129 4.7E-21 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 M634_19980 299f245c4e74ea69d205b32ace2f2119 419 Gene3D G3DSA:3.40.50.620 2 224 2.7E-88 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M634_19980 299f245c4e74ea69d205b32ace2f2119 419 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 218 230 8.4E-32 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 M634_19980 299f245c4e74ea69d205b32ace2f2119 419 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 44 66 8.4E-32 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 M634_19980 299f245c4e74ea69d205b32ace2f2119 419 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 164 179 8.4E-32 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 M634_19980 299f245c4e74ea69d205b32ace2f2119 419 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 185 207 8.4E-32 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 M634_19980 299f245c4e74ea69d205b32ace2f2119 419 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 3 416 2.4E-124 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 M634_19980 299f245c4e74ea69d205b32ace2f2119 419 Gene3D G3DSA:1.10.240.10 225 327 2.8E-36 T 12-10-2018 M634_19980 299f245c4e74ea69d205b32ace2f2119 419 SUPERFAMILY SSF52374 3 325 8.44E-101 T 12-10-2018 M634_19980 299f245c4e74ea69d205b32ace2f2119 419 Pfam PF00579 tRNA synthetases class I (W and Y) 31 325 3.1E-81 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 M634_19980 299f245c4e74ea69d205b32ace2f2119 419 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 50 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 M634_19980 299f245c4e74ea69d205b32ace2f2119 419 Gene3D G3DSA:3.10.290.10 328 419 6.5E-22 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 M634_19980 299f245c4e74ea69d205b32ace2f2119 419 SUPERFAMILY SSF55174 323 416 3.66E-13 T 12-10-2018 M634_19980 299f245c4e74ea69d205b32ace2f2119 419 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 3 417 43.863 T 12-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 M634_21810 6ac61104706887da7a0b3ec89346c89d 366 SUPERFAMILY SSF51395 3 364 7.33E-127 T 12-10-2018 M634_21810 6ac61104706887da7a0b3ec89346c89d 366 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 341 5.2E-100 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 M634_21810 6ac61104706887da7a0b3ec89346c89d 366 Gene3D G3DSA:3.20.20.70 1 365 2.9E-142 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_05015 5ad186f9555a859c33fa085db243442a 543 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 70 283 2.3E-38 T 12-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 M634_05015 5ad186f9555a859c33fa085db243442a 543 TIGRFAM TIGR02783 TrbL_P: P-type conjugative transfer protein TrbL 34 344 2.7E-72 T 12-10-2018 IPR014150 Conjugal transfer, TrbL M634_00190 b3be7139d510eaa8c961d87e592146d2 279 SUPERFAMILY SSF53335 5 268 7.75E-76 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_00190 b3be7139d510eaa8c961d87e592146d2 279 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 M634_00190 b3be7139d510eaa8c961d87e592146d2 279 Gene3D G3DSA:1.10.1020.10 57 156 1.8E-83 T 12-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 M634_00190 b3be7139d510eaa8c961d87e592146d2 279 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 252 2.3E-67 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 M634_00190 b3be7139d510eaa8c961d87e592146d2 279 PIRSF PIRSF000398 1 274 1.5E-72 T 12-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 M634_00190 b3be7139d510eaa8c961d87e592146d2 279 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 268 2.5E-94 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 M634_00190 b3be7139d510eaa8c961d87e592146d2 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 3.9E-18 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 M634_00190 b3be7139d510eaa8c961d87e592146d2 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 3.9E-18 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 M634_00190 b3be7139d510eaa8c961d87e592146d2 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 3.9E-18 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 M634_00190 b3be7139d510eaa8c961d87e592146d2 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 3.9E-18 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 M634_00190 b3be7139d510eaa8c961d87e592146d2 279 Gene3D G3DSA:3.40.50.150 7 239 1.8E-83 T 12-10-2018 M634_06390 f5cd63d342dc7c64662152e8356250a9 314 SUPERFAMILY SSF46785 8 90 7.9E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_06390 f5cd63d342dc7c64662152e8356250a9 314 Pfam PF03466 LysR substrate binding domain 90 295 8.8E-43 T 12-10-2018 IPR005119 LysR, substrate-binding M634_06390 f5cd63d342dc7c64662152e8356250a9 314 Gene3D G3DSA:3.40.190.10 94 293 1.9E-57 T 12-10-2018 M634_06390 f5cd63d342dc7c64662152e8356250a9 314 Gene3D G3DSA:3.40.190.10 165 267 1.9E-57 T 12-10-2018 M634_06390 f5cd63d342dc7c64662152e8356250a9 314 Gene3D G3DSA:1.10.10.10 5 92 5.8E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_06390 f5cd63d342dc7c64662152e8356250a9 314 SUPERFAMILY SSF53850 90 299 8.32E-45 T 12-10-2018 M634_06390 f5cd63d342dc7c64662152e8356250a9 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 6.1E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_16285 f3e25822d5a16a87bea377332087033d 488 Gene3D G3DSA:3.30.70.2180 286 391 7.3E-102 T 12-10-2018 M634_16285 f3e25822d5a16a87bea377332087033d 488 Gene3D G3DSA:1.20.120.1210 250 485 7.3E-102 T 12-10-2018 M634_16285 f3e25822d5a16a87bea377332087033d 488 SMART SM00246 136 153 9.0E-4 T 12-10-2018 IPR003124 WH2 domain GO:0003779 M634_16285 f3e25822d5a16a87bea377332087033d 488 SMART SM00246 210 229 170.0 T 12-10-2018 IPR003124 WH2 domain GO:0003779 M634_16285 f3e25822d5a16a87bea377332087033d 488 Pfam PF02205 WH2 motif 135 154 2.9E-4 T 12-10-2018 IPR003124 WH2 domain GO:0003779 M634_16285 f3e25822d5a16a87bea377332087033d 488 Pfam PF02205 WH2 motif 207 229 0.0035 T 12-10-2018 IPR003124 WH2 domain GO:0003779 M634_12825 6b5cc612e0fe989c188c3c0a431ff2cb 214 SMART SM00479 18 204 6.5E-30 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III M634_12825 6b5cc612e0fe989c188c3c0a431ff2cb 214 SUPERFAMILY SSF53098 10 208 3.91E-57 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M634_12825 6b5cc612e0fe989c188c3c0a431ff2cb 214 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 209 1.2E-100 T 12-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 M634_12825 6b5cc612e0fe989c188c3c0a431ff2cb 214 Gene3D G3DSA:3.30.420.10 9 214 3.1E-54 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M634_12825 6b5cc612e0fe989c188c3c0a431ff2cb 214 Pfam PF00929 Exonuclease 20 195 2.2E-45 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III M634_12825 6b5cc612e0fe989c188c3c0a431ff2cb 214 Hamap MF_00157 Ribonuclease T [rnt]. 1 214 115.522 T 12-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 M634_06145 0adfbbc9350e01b608059402d0169c86 554 Pfam PF13537 Glutamine amidotransferase domain 48 165 3.8E-40 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain M634_06145 0adfbbc9350e01b608059402d0169c86 554 PIRSF PIRSF001589 363 506 1.3E-27 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 M634_06145 0adfbbc9350e01b608059402d0169c86 554 PIRSF PIRSF001589 1 379 1.6E-106 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 M634_06145 0adfbbc9350e01b608059402d0169c86 554 SUPERFAMILY SSF52402 208 483 1.86E-74 T 12-10-2018 M634_06145 0adfbbc9350e01b608059402d0169c86 554 Gene3D G3DSA:3.40.50.620 194 514 5.0E-112 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M634_06145 0adfbbc9350e01b608059402d0169c86 554 Gene3D G3DSA:3.60.20.10 2 193 5.7E-70 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal M634_06145 0adfbbc9350e01b608059402d0169c86 554 Pfam PF00733 Asparagine synthase 211 366 4.3E-56 T 12-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 M634_06145 0adfbbc9350e01b608059402d0169c86 554 SUPERFAMILY SSF56235 1 196 1.8E-56 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal M634_06145 0adfbbc9350e01b608059402d0169c86 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 372 1.2E-115 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 M634_12480 2093ebdc4c0232c24a2b4eae1fd352af 316 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 227 315 1.2E-34 T 12-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 M634_12480 2093ebdc4c0232c24a2b4eae1fd352af 316 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 316 4.7E-146 T 12-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 M634_12480 2093ebdc4c0232c24a2b4eae1fd352af 316 SUPERFAMILY SSF53901 3 315 7.49E-73 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M634_12480 2093ebdc4c0232c24a2b4eae1fd352af 316 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 316 73.093 T 12-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 M634_12480 2093ebdc4c0232c24a2b4eae1fd352af 316 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 8.7E-32 T 12-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 M634_12480 2093ebdc4c0232c24a2b4eae1fd352af 316 Gene3D G3DSA:3.40.47.10 1 316 8.6E-128 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M634_01855 cd50dabc3bb6f48e6de8f83299440939 118 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 6 113 1.1E-28 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 M634_01855 cd50dabc3bb6f48e6de8f83299440939 118 Pfam PF00825 Ribonuclease P 6 112 2.1E-32 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 M634_01855 cd50dabc3bb6f48e6de8f83299440939 118 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 16 104 3.0E-46 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 M634_01855 cd50dabc3bb6f48e6de8f83299440939 118 Gene3D G3DSA:3.30.230.10 1 118 4.8E-41 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M634_01855 cd50dabc3bb6f48e6de8f83299440939 118 SUPERFAMILY SSF54211 4 114 1.82E-30 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M634_01855 cd50dabc3bb6f48e6de8f83299440939 118 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 56 70 - T 12-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 M634_01855 cd50dabc3bb6f48e6de8f83299440939 118 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 17.434 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 M634_06240 f8f4be9f0dc754cb86866fad6925e432 236 Pfam PF13534 4Fe-4S dicluster domain 146 219 1.5E-10 T 12-10-2018 M634_06240 f8f4be9f0dc754cb86866fad6925e432 236 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 8 228 1.1E-85 T 12-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 M634_06240 f8f4be9f0dc754cb86866fad6925e432 236 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 109 1.1E-29 T 12-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 M634_06240 f8f4be9f0dc754cb86866fad6925e432 236 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M634_06240 f8f4be9f0dc754cb86866fad6925e432 236 Gene3D G3DSA:1.10.1060.10 105 236 1.1E-55 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 M634_06240 f8f4be9f0dc754cb86866fad6925e432 236 SUPERFAMILY SSF46548 105 233 5.76E-40 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 M634_06240 f8f4be9f0dc754cb86866fad6925e432 236 Gene3D G3DSA:3.10.20.30 1 104 3.4E-33 T 12-10-2018 IPR012675 Beta-grasp domain superfamily M634_06240 f8f4be9f0dc754cb86866fad6925e432 236 SUPERFAMILY SSF54292 1 104 3.51E-29 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 M634_06555 ff3b8200d6c032962c5483aa20db062a 332 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 33 276 5.6E-80 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 M634_06555 ff3b8200d6c032962c5483aa20db062a 332 PIRSF PIRSF006470 1 332 6.6E-124 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 M634_06555 ff3b8200d6c032962c5483aa20db062a 332 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 317 1.6E-104 T 12-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 M634_06555 ff3b8200d6c032962c5483aa20db062a 332 Gene3D G3DSA:3.40.190.170 27 328 2.5E-90 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily M634_17755 41469525e09be95dc13ce713a92cdbc2 678 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 66 678 1.5E-90 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 M634_17755 41469525e09be95dc13ce713a92cdbc2 678 Gene3D G3DSA:2.170.130.10 48 173 3.1E-37 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily M634_17755 41469525e09be95dc13ce713a92cdbc2 678 Pfam PF07715 TonB-dependent Receptor Plug Domain 66 162 3.4E-22 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain M634_17755 41469525e09be95dc13ce713a92cdbc2 678 Pfam PF00593 TonB dependent receptor 269 676 7.1E-47 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel M634_17755 41469525e09be95dc13ce713a92cdbc2 678 SUPERFAMILY SSF56935 34 678 2.0E-124 T 12-10-2018 M634_17755 41469525e09be95dc13ce713a92cdbc2 678 Gene3D G3DSA:2.40.170.20 174 678 7.5E-96 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily M634_08560 1243d4a201fa0d9cc531f95a800bba66 333 Gene3D G3DSA:3.10.310.10 144 309 5.4E-114 T 12-10-2018 M634_08560 1243d4a201fa0d9cc531f95a800bba66 333 SUPERFAMILY SSF54506 3 330 2.92E-118 T 12-10-2018 M634_08560 1243d4a201fa0d9cc531f95a800bba66 333 PIRSF PIRSF029792 1 333 1.6E-138 T 12-10-2018 IPR008794 Proline racemase family M634_08560 1243d4a201fa0d9cc531f95a800bba66 333 Gene3D G3DSA:3.10.310.10 7 331 5.4E-114 T 12-10-2018 M634_08560 1243d4a201fa0d9cc531f95a800bba66 333 Pfam PF05544 Proline racemase 8 330 2.2E-128 T 12-10-2018 IPR008794 Proline racemase family M634_03725 1a4fc32f304d177b77ba805a3b3545f2 319 Gene3D G3DSA:3.40.190.10 108 307 5.6E-41 T 12-10-2018 M634_03725 1a4fc32f304d177b77ba805a3b3545f2 319 Gene3D G3DSA:1.10.10.10 14 104 2.9E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_03725 1a4fc32f304d177b77ba805a3b3545f2 319 Gene3D G3DSA:3.40.190.10 187 283 5.6E-41 T 12-10-2018 M634_03725 1a4fc32f304d177b77ba805a3b3545f2 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 61 1.4E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_03725 1a4fc32f304d177b77ba805a3b3545f2 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 61 72 1.4E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_03725 1a4fc32f304d177b77ba805a3b3545f2 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.4E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_03725 1a4fc32f304d177b77ba805a3b3545f2 319 SUPERFAMILY SSF53850 106 309 2.53E-39 T 12-10-2018 M634_03725 1a4fc32f304d177b77ba805a3b3545f2 319 SUPERFAMILY SSF46785 22 99 3.45E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_03725 1a4fc32f304d177b77ba805a3b3545f2 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 84 1.3E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_03725 1a4fc32f304d177b77ba805a3b3545f2 319 Pfam PF03466 LysR substrate binding domain 121 306 3.4E-23 T 12-10-2018 IPR005119 LysR, substrate-binding M634_10170 66894acbd0e2b070761e0e538503e9ac 592 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_10170 66894acbd0e2b070761e0e538503e9ac 592 Gene3D G3DSA:3.40.50.300 329 588 1.7E-83 T 12-10-2018 M634_10170 66894acbd0e2b070761e0e538503e9ac 592 Pfam PF00005 ABC transporter 353 501 2.0E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_10170 66894acbd0e2b070761e0e538503e9ac 592 Gene3D G3DSA:1.20.1560.10 1 325 7.4E-76 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M634_10170 66894acbd0e2b070761e0e538503e9ac 592 SUPERFAMILY SSF52540 332 571 5.33E-79 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_10170 66894acbd0e2b070761e0e538503e9ac 592 SUPERFAMILY SSF90123 8 327 1.7E-71 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M634_10170 66894acbd0e2b070761e0e538503e9ac 592 SMART SM00382 362 547 6.0E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_10170 66894acbd0e2b070761e0e538503e9ac 592 Pfam PF00664 ABC transporter transmembrane region 22 291 1.7E-44 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 M634_06275 37ebb232b882e8627db69c96a3c2957f 292 PRINTS PR00691 Adhesin B signature 123 142 5.9E-5 T 12-10-2018 IPR006129 Adhesin B GO:0007155 M634_06275 37ebb232b882e8627db69c96a3c2957f 292 PRINTS PR00691 Adhesin B signature 44 62 5.9E-5 T 12-10-2018 IPR006129 Adhesin B GO:0007155 M634_06275 37ebb232b882e8627db69c96a3c2957f 292 PRINTS PR00691 Adhesin B signature 63 82 5.9E-5 T 12-10-2018 IPR006129 Adhesin B GO:0007155 M634_06275 37ebb232b882e8627db69c96a3c2957f 292 Gene3D G3DSA:3.40.50.1980 180 292 2.3E-39 T 12-10-2018 M634_06275 37ebb232b882e8627db69c96a3c2957f 292 Gene3D G3DSA:3.40.50.1980 21 179 1.8E-48 T 12-10-2018 M634_06275 37ebb232b882e8627db69c96a3c2957f 292 Pfam PF01297 Zinc-uptake complex component A periplasmic 22 289 3.0E-60 T 12-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 M634_06275 37ebb232b882e8627db69c96a3c2957f 292 SUPERFAMILY SSF53807 12 290 6.87E-76 T 12-10-2018 M634_06275 37ebb232b882e8627db69c96a3c2957f 292 PRINTS PR00690 Adhesin family signature 179 200 2.8E-9 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 M634_06275 37ebb232b882e8627db69c96a3c2957f 292 PRINTS PR00690 Adhesin family signature 232 250 2.8E-9 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 M634_06275 37ebb232b882e8627db69c96a3c2957f 292 PRINTS PR00690 Adhesin family signature 50 63 2.8E-9 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 M634_06275 37ebb232b882e8627db69c96a3c2957f 292 PRINTS PR00690 Adhesin family signature 63 80 2.8E-9 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 M634_03520 1424fdbb2c8c0bbf3566c2c6d73bbdaa 212 Pfam PF01625 Peptide methionine sulfoxide reductase 44 197 6.9E-69 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 M634_03520 1424fdbb2c8c0bbf3566c2c6d73bbdaa 212 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 44 197 2.1E-68 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 M634_03520 1424fdbb2c8c0bbf3566c2c6d73bbdaa 212 SUPERFAMILY SSF55068 3 207 5.36E-81 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 M634_03520 1424fdbb2c8c0bbf3566c2c6d73bbdaa 212 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 42 203 38.479 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 M634_03520 1424fdbb2c8c0bbf3566c2c6d73bbdaa 212 Gene3D G3DSA:3.30.1060.10 3 212 1.7E-92 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 M634_01260 7ae7b94d06b963b22ccb01acd3a5e7aa 808 SMART SM00563 300 427 1.2E-26 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 M634_01260 7ae7b94d06b963b22ccb01acd3a5e7aa 808 Pfam PF01553 Acyltransferase 289 424 2.0E-23 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 M634_01260 7ae7b94d06b963b22ccb01acd3a5e7aa 808 PIRSF PIRSF500064 2 808 0.0 T 12-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 M634_01260 7ae7b94d06b963b22ccb01acd3a5e7aa 808 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 807 31.396 T 12-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 M634_01260 7ae7b94d06b963b22ccb01acd3a5e7aa 808 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 799 0.0 T 12-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 M634_01260 7ae7b94d06b963b22ccb01acd3a5e7aa 808 PIRSF PIRSF000437 19 808 0.0 T 12-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 M634_01260 7ae7b94d06b963b22ccb01acd3a5e7aa 808 SUPERFAMILY SSF69593 241 490 2.09E-25 T 12-10-2018 M634_07460 c0a447c2f0aa6c3e12579c0e8077cd4b 449 Gene3D G3DSA:1.20.272.10 242 346 1.3E-43 T 12-10-2018 M634_07460 c0a447c2f0aa6c3e12579c0e8077cd4b 449 Gene3D G3DSA:1.10.8.60 166 241 2.8E-23 T 12-10-2018 M634_07460 c0a447c2f0aa6c3e12579c0e8077cd4b 449 Pfam PF16193 AAA C-terminal domain 191 268 4.0E-21 T 12-10-2018 IPR032423 AAA C-terminal domain M634_07460 c0a447c2f0aa6c3e12579c0e8077cd4b 449 Pfam PF12002 MgsA AAA+ ATPase C terminal 269 435 1.7E-67 T 12-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal M634_07460 c0a447c2f0aa6c3e12579c0e8077cd4b 449 SMART SM00382 50 166 1.5E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_07460 c0a447c2f0aa6c3e12579c0e8077cd4b 449 Gene3D G3DSA:3.40.50.300 3 165 1.1E-48 T 12-10-2018 M634_07460 c0a447c2f0aa6c3e12579c0e8077cd4b 449 SUPERFAMILY SSF48019 253 435 2.32E-73 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 M634_07460 c0a447c2f0aa6c3e12579c0e8077cd4b 449 SUPERFAMILY SSF52540 11 236 6.95E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_07460 c0a447c2f0aa6c3e12579c0e8077cd4b 449 Gene3D G3DSA:1.10.3710.10 347 448 9.6E-37 T 12-10-2018 M634_07460 c0a447c2f0aa6c3e12579c0e8077cd4b 449 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 54 159 7.9E-17 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 M634_14645 975fafe8646bc8518112a701ffdc94cd 314 SUPERFAMILY SSF55120 9 247 5.76E-84 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 M634_14645 975fafe8646bc8518112a701ffdc94cd 314 SUPERFAMILY SSF88697 250 310 7.95E-15 T 12-10-2018 IPR015947 PUA-like superfamily M634_14645 975fafe8646bc8518112a701ffdc94cd 314 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 179 1.4E-56 T 12-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 M634_14645 975fafe8646bc8518112a701ffdc94cd 314 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 247 1.3E-24 T 12-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 M634_14645 975fafe8646bc8518112a701ffdc94cd 314 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 251 308 1.2E-19 T 12-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 M634_14645 975fafe8646bc8518112a701ffdc94cd 314 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 218 2.1E-86 T 12-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 M634_14645 975fafe8646bc8518112a701ffdc94cd 314 Gene3D G3DSA:2.30.130.10 249 311 3.8E-23 T 12-10-2018 IPR036974 PUA domain superfamily GO:0003723 M634_14645 975fafe8646bc8518112a701ffdc94cd 314 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 308 18.982 T 12-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 M634_14645 975fafe8646bc8518112a701ffdc94cd 314 Gene3D G3DSA:3.30.2350.10 1 248 8.4E-96 T 12-10-2018 M634_14015 f19340a782ebc9dee8954107db3658d5 345 Pfam PF12069 Protein of unknown function (DUF3549) 3 340 1.0E-134 T 12-10-2018 IPR021936 Protein of unknown function DUF3549 M634_01285 961638fee02b3016af48334c87e46ba4 106 SMART SM00450 7 102 9.6E-19 T 12-10-2018 IPR001763 Rhodanese-like domain M634_01285 961638fee02b3016af48334c87e46ba4 106 Gene3D G3DSA:3.40.250.10 1 101 6.9E-26 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M634_01285 961638fee02b3016af48334c87e46ba4 106 Pfam PF00581 Rhodanese-like domain 13 98 7.7E-12 T 12-10-2018 IPR001763 Rhodanese-like domain M634_01285 961638fee02b3016af48334c87e46ba4 106 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 105 31.832 T 12-10-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927 M634_01285 961638fee02b3016af48334c87e46ba4 106 SUPERFAMILY SSF52821 1 105 2.36E-29 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M634_20820 dac1abd5166f80bcd7555817cd712eba 414 SUPERFAMILY SSF53822 25 392 3.23E-54 T 12-10-2018 IPR028082 Periplasmic binding protein-like I M634_20820 dac1abd5166f80bcd7555817cd712eba 414 Pfam PF13458 Periplasmic binding protein 27 389 1.1E-66 T 12-10-2018 IPR028081 Leucine-binding protein domain M634_20820 dac1abd5166f80bcd7555817cd712eba 414 Gene3D G3DSA:3.40.50.2300 152 383 1.7E-92 T 12-10-2018 M634_20820 dac1abd5166f80bcd7555817cd712eba 414 Gene3D G3DSA:3.40.50.2300 29 381 1.7E-92 T 12-10-2018 M634_21665 d2d693e47ce1f687e34fe24796a85c2f 543 Pfam PF14559 Tetratricopeptide repeat 177 237 8.5E-7 T 12-10-2018 M634_21665 d2d693e47ce1f687e34fe24796a85c2f 543 Gene3D G3DSA:3.40.50.2300 7 141 3.6E-20 T 12-10-2018 M634_21665 d2d693e47ce1f687e34fe24796a85c2f 543 Pfam PF00072 Response regulator receiver domain 10 119 2.1E-16 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_21665 d2d693e47ce1f687e34fe24796a85c2f 543 SUPERFAMILY SSF52172 9 139 1.31E-22 T 12-10-2018 IPR011006 CheY-like superfamily M634_21665 d2d693e47ce1f687e34fe24796a85c2f 543 SUPERFAMILY SSF48452 145 298 3.57E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_21665 d2d693e47ce1f687e34fe24796a85c2f 543 Gene3D G3DSA:1.25.40.10 142 303 1.7E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_21665 d2d693e47ce1f687e34fe24796a85c2f 543 PIRSF PIRSF011521 1 543 6.0E-272 T 12-10-2018 IPR014460 Signal transduction response regulator, predicted, VieB M634_21665 d2d693e47ce1f687e34fe24796a85c2f 543 SMART SM00448 8 124 1.4E-13 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_11235 f0829544e8ec05a775da0d624aac34eb 194 Gene3D G3DSA:3.40.630.30 14 191 1.5E-43 T 12-10-2018 M634_11235 f0829544e8ec05a775da0d624aac34eb 194 SUPERFAMILY SSF55729 14 185 1.71E-37 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_11235 f0829544e8ec05a775da0d624aac34eb 194 Pfam PF13302 Acetyltransferase (GNAT) domain 17 160 2.5E-17 T 12-10-2018 IPR000182 GNAT domain M634_01860 df2a82d39203dcb8a58b07bf0a10912c 540 Pfam PF02096 60Kd inner membrane protein 351 530 1.5E-63 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 M634_01860 df2a82d39203dcb8a58b07bf0a10912c 540 PRINTS PR01900 YidC translocation/secretion protein signature 465 480 1.8E-26 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 M634_01860 df2a82d39203dcb8a58b07bf0a10912c 540 PRINTS PR01900 YidC translocation/secretion protein signature 336 352 1.8E-26 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 M634_01860 df2a82d39203dcb8a58b07bf0a10912c 540 PRINTS PR01900 YidC translocation/secretion protein signature 485 509 1.8E-26 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 M634_01860 df2a82d39203dcb8a58b07bf0a10912c 540 Gene3D G3DSA:2.70.98.90 61 330 6.2E-90 T 12-10-2018 IPR038221 YidC, periplasmic domain superfamily M634_01860 df2a82d39203dcb8a58b07bf0a10912c 540 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 350 529 1.0E-73 T 12-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_01860 df2a82d39203dcb8a58b07bf0a10912c 540 Pfam PF14849 YidC periplasmic domain 65 339 5.2E-84 T 12-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain M634_01860 df2a82d39203dcb8a58b07bf0a10912c 540 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 349 1.6E-111 T 12-10-2018 IPR028053 Membrane insertase YidC, N-terminal M634_01860 df2a82d39203dcb8a58b07bf0a10912c 540 PRINTS PR00701 60kDa inner membrane protein signature 321 341 1.6E-99 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 M634_01860 df2a82d39203dcb8a58b07bf0a10912c 540 PRINTS PR00701 60kDa inner membrane protein signature 412 435 1.6E-99 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 M634_01860 df2a82d39203dcb8a58b07bf0a10912c 540 PRINTS PR00701 60kDa inner membrane protein signature 2 23 1.6E-99 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 M634_01860 df2a82d39203dcb8a58b07bf0a10912c 540 PRINTS PR00701 60kDa inner membrane protein signature 214 232 1.6E-99 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 M634_01860 df2a82d39203dcb8a58b07bf0a10912c 540 PRINTS PR00701 60kDa inner membrane protein signature 496 519 1.6E-99 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 M634_01860 df2a82d39203dcb8a58b07bf0a10912c 540 PRINTS PR00701 60kDa inner membrane protein signature 249 264 1.6E-99 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 M634_01860 df2a82d39203dcb8a58b07bf0a10912c 540 PRINTS PR00701 60kDa inner membrane protein signature 459 481 1.6E-99 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 M634_01860 df2a82d39203dcb8a58b07bf0a10912c 540 PRINTS PR00701 60kDa inner membrane protein signature 71 92 1.6E-99 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 M634_01860 df2a82d39203dcb8a58b07bf0a10912c 540 PRINTS PR00701 60kDa inner membrane protein signature 161 181 1.6E-99 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 M634_01860 df2a82d39203dcb8a58b07bf0a10912c 540 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 532 26.047 T 12-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 M634_07225 2c0382581621e507e023296c10ab5b42 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 47.719 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 M634_07225 2c0382581621e507e023296c10ab5b42 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 155 3.2E-75 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 M634_07225 2c0382581621e507e023296c10ab5b42 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 12-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 M634_07225 2c0382581621e507e023296c10ab5b42 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 1.1E-62 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 M634_07225 2c0382581621e507e023296c10ab5b42 173 Gene3D G3DSA:3.30.420.10 2 159 1.7E-52 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M634_07225 2c0382581621e507e023296c10ab5b42 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 3.1E-42 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 M634_07225 2c0382581621e507e023296c10ab5b42 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 3.1E-42 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 M634_07225 2c0382581621e507e023296c10ab5b42 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 3.1E-42 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 M634_07225 2c0382581621e507e023296c10ab5b42 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 3.1E-42 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 M634_07225 2c0382581621e507e023296c10ab5b42 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 3.1E-42 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 M634_07225 2c0382581621e507e023296c10ab5b42 173 SUPERFAMILY SSF53098 3 156 5.31E-55 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M634_19770 f28deda5e7b044a7548b704fe256a14a 69 Pfam PF04400 (Na+)-NQR maturation NqrM 21 62 8.2E-18 T 12-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM M634_17720 66e1ff195a4fa08ec2633d75af240c46 915 Gene3D G3DSA:3.30.830.10 732 914 6.9E-12 T 12-10-2018 M634_17720 66e1ff195a4fa08ec2633d75af240c46 915 Gene3D G3DSA:3.30.830.10 6 247 3.0E-59 T 12-10-2018 M634_17720 66e1ff195a4fa08ec2633d75af240c46 915 SUPERFAMILY SSF63411 25 239 4.54E-43 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 M634_17720 66e1ff195a4fa08ec2633d75af240c46 915 SUPERFAMILY SSF63411 733 906 7.51E-16 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 M634_17720 66e1ff195a4fa08ec2633d75af240c46 915 Pfam PF05193 Peptidase M16 inactive domain 669 847 3.9E-9 T 12-10-2018 IPR007863 Peptidase M16, C-terminal M634_17720 66e1ff195a4fa08ec2633d75af240c46 915 Pfam PF05193 Peptidase M16 inactive domain 199 372 8.5E-13 T 12-10-2018 IPR007863 Peptidase M16, C-terminal M634_17720 66e1ff195a4fa08ec2633d75af240c46 915 SUPERFAMILY SSF63411 319 452 6.29E-5 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 M634_17720 66e1ff195a4fa08ec2633d75af240c46 915 Gene3D G3DSA:3.30.830.10 506 716 4.3E-13 T 12-10-2018 M634_17720 66e1ff195a4fa08ec2633d75af240c46 915 Gene3D G3DSA:3.30.830.10 264 468 7.9E-11 T 12-10-2018 M634_17720 66e1ff195a4fa08ec2633d75af240c46 915 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 60 83 - T 12-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 M634_17720 66e1ff195a4fa08ec2633d75af240c46 915 SUPERFAMILY SSF63411 491 716 8.03E-26 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 M634_17720 66e1ff195a4fa08ec2633d75af240c46 915 Pfam PF00675 Insulinase (Peptidase family M16) 47 176 5.7E-25 T 12-10-2018 IPR011765 Peptidase M16, N-terminal M634_09050 5f53a683ff49db84408e146433053352 212 Pfam PF02108 Flagellar assembly protein FliH 75 194 5.0E-17 T 12-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE M634_09050 5f53a683ff49db84408e146433053352 212 TIGRFAM TIGR02499 HrpE_YscL_not: type III secretion apparatus protein, HrpE/YscL family 19 187 1.3E-41 T 12-10-2018 IPR012842 Type III secretion system HrpE/YscL M634_03710 cd92764512d42d77a9971f5d976d6ed5 265 Pfam PF08239 Bacterial SH3 domain 132 184 6.1E-13 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type M634_03710 cd92764512d42d77a9971f5d976d6ed5 265 SMART SM00287 123 188 0.0042 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type M634_03710 cd92764512d42d77a9971f5d976d6ed5 265 Gene3D G3DSA:2.30.30.40 127 185 2.5E-11 T 12-10-2018 M634_22230 3f8e020d28244c70cad11ff2fc8ba240 580 SUPERFAMILY SSF55816 369 564 1.44E-38 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_22230 3f8e020d28244c70cad11ff2fc8ba240 580 Pfam PF02872 5'-nucleotidase, C-terminal domain 388 539 1.3E-23 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_22230 3f8e020d28244c70cad11ff2fc8ba240 580 Gene3D G3DSA:3.90.780.10 370 578 3.7E-35 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_22230 3f8e020d28244c70cad11ff2fc8ba240 580 Pfam PF00149 Calcineurin-like phosphoesterase 13 252 2.2E-8 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 M634_22230 3f8e020d28244c70cad11ff2fc8ba240 580 SUPERFAMILY SSF56300 11 327 3.56E-75 T 12-10-2018 M634_22230 3f8e020d28244c70cad11ff2fc8ba240 580 Gene3D G3DSA:3.60.21.10 2 369 5.1E-88 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like M634_22230 3f8e020d28244c70cad11ff2fc8ba240 580 PRINTS PR01607 Apyrase family signature 235 258 1.1E-13 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_22230 3f8e020d28244c70cad11ff2fc8ba240 580 PRINTS PR01607 Apyrase family signature 514 533 1.1E-13 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_22230 3f8e020d28244c70cad11ff2fc8ba240 580 PRINTS PR01607 Apyrase family signature 275 295 1.1E-13 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_22230 3f8e020d28244c70cad11ff2fc8ba240 580 PRINTS PR01607 Apyrase family signature 10 28 1.1E-13 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_22230 3f8e020d28244c70cad11ff2fc8ba240 580 PRINTS PR01607 Apyrase family signature 216 233 1.1E-13 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_20965 c93eef8485c2f813b6716d1fb3778157 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 198 1.4E-4 T 12-10-2018 M634_20965 c93eef8485c2f813b6716d1fb3778157 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 6.4E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20965 c93eef8485c2f813b6716d1fb3778157 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 6.4E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20965 c93eef8485c2f813b6716d1fb3778157 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 6.4E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20965 c93eef8485c2f813b6716d1fb3778157 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 5.0E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20965 c93eef8485c2f813b6716d1fb3778157 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.0E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20965 c93eef8485c2f813b6716d1fb3778157 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 5.0E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20965 c93eef8485c2f813b6716d1fb3778157 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 5.0E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20965 c93eef8485c2f813b6716d1fb3778157 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 5.0E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20965 c93eef8485c2f813b6716d1fb3778157 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 5.0E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20965 c93eef8485c2f813b6716d1fb3778157 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 250 6.0E-52 T 12-10-2018 M634_20965 c93eef8485c2f813b6716d1fb3778157 252 SUPERFAMILY SSF51735 2 252 2.1E-67 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_20965 c93eef8485c2f813b6716d1fb3778157 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 M634_20965 c93eef8485c2f813b6716d1fb3778157 252 Gene3D G3DSA:3.40.50.720 1 252 1.2E-71 T 12-10-2018 M634_23720 a6172d0ba2e76a86cdb0b65ec3854f5c 202 SUPERFAMILY SSF56784 11 198 2.36E-32 T 12-10-2018 IPR036412 HAD-like superfamily M634_23720 a6172d0ba2e76a86cdb0b65ec3854f5c 202 Gene3D G3DSA:3.40.50.1000 12 188 2.3E-51 T 12-10-2018 IPR023214 HAD superfamily M634_23720 a6172d0ba2e76a86cdb0b65ec3854f5c 202 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 11 22 1.4E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M634_23720 a6172d0ba2e76a86cdb0b65ec3854f5c 202 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 88 101 1.4E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M634_23720 a6172d0ba2e76a86cdb0b65ec3854f5c 202 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 134 154 1.4E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M634_23720 a6172d0ba2e76a86cdb0b65ec3854f5c 202 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 13 165 2.3E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M634_23720 a6172d0ba2e76a86cdb0b65ec3854f5c 202 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 13 172 3.2E-11 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M634_23720 a6172d0ba2e76a86cdb0b65ec3854f5c 202 Gene3D G3DSA:1.10.260.80 24 75 2.3E-51 T 12-10-2018 M634_23720 a6172d0ba2e76a86cdb0b65ec3854f5c 202 Pfam PF13419 Haloacid dehalogenase-like hydrolase 14 171 6.5E-17 T 12-10-2018 M634_24350 699a663a21b8f4ef9c9fbb9f4f259186 289 Pfam PF01497 Periplasmic binding protein 35 264 1.0E-34 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain M634_24350 699a663a21b8f4ef9c9fbb9f4f259186 289 SUPERFAMILY SSF53807 33 289 1.53E-46 T 12-10-2018 M634_24350 699a663a21b8f4ef9c9fbb9f4f259186 289 Gene3D G3DSA:3.40.50.1980 150 289 4.5E-43 T 12-10-2018 M634_24350 699a663a21b8f4ef9c9fbb9f4f259186 289 Gene3D G3DSA:3.40.50.1980 29 149 3.7E-33 T 12-10-2018 M634_21715 932d5d6fbc1da28ce2ebdf54b2c243d4 701 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 542 610 1.8E-14 T 12-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial M634_21715 932d5d6fbc1da28ce2ebdf54b2c243d4 701 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 69 115 3.5E-18 T 12-10-2018 IPR011096 FTP domain M634_21715 932d5d6fbc1da28ce2ebdf54b2c243d4 701 SUPERFAMILY SSF55486 211 508 9.16E-83 T 12-10-2018 M634_21715 932d5d6fbc1da28ce2ebdf54b2c243d4 701 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 220 358 1.0E-38 T 12-10-2018 IPR013856 Peptidase M4 domain GO:0004222 M634_21715 932d5d6fbc1da28ce2ebdf54b2c243d4 701 Gene3D G3DSA:3.10.170.10 210 362 5.0E-61 T 12-10-2018 M634_21715 932d5d6fbc1da28ce2ebdf54b2c243d4 701 Gene3D G3DSA:3.10.450.490 36 125 1.2E-32 T 12-10-2018 M634_21715 932d5d6fbc1da28ce2ebdf54b2c243d4 701 Gene3D G3DSA:1.10.390.10 363 511 2.3E-51 T 12-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily M634_21715 932d5d6fbc1da28ce2ebdf54b2c243d4 701 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 370 381 1.1E-25 T 12-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 M634_21715 932d5d6fbc1da28ce2ebdf54b2c243d4 701 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 433 449 1.1E-25 T 12-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 M634_21715 932d5d6fbc1da28ce2ebdf54b2c243d4 701 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 315 335 1.1E-25 T 12-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 M634_21715 932d5d6fbc1da28ce2ebdf54b2c243d4 701 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 349 365 1.1E-25 T 12-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 M634_21715 932d5d6fbc1da28ce2ebdf54b2c243d4 701 Pfam PF03413 Peptidase propeptide and YPEB domain 131 204 2.8E-10 T 12-10-2018 IPR025711 PepSY domain M634_21715 932d5d6fbc1da28ce2ebdf54b2c243d4 701 Gene3D G3DSA:2.60.120.380 523 623 3.4E-31 T 12-10-2018 M634_21715 932d5d6fbc1da28ce2ebdf54b2c243d4 701 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 361 506 5.9E-38 T 12-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 M634_21715 932d5d6fbc1da28ce2ebdf54b2c243d4 701 Gene3D G3DSA:3.10.450.40 127 209 3.4E-21 T 12-10-2018 M634_03735 44208baa503725d3a1fd863a1fc27969 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 396 545 1.9E-50 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 M634_03735 44208baa503725d3a1fd863a1fc27969 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 173 2.6E-59 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 M634_03735 44208baa503725d3a1fd863a1fc27969 574 SUPERFAMILY SSF52467 191 364 8.28E-64 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily M634_03735 44208baa503725d3a1fd863a1fc27969 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 331 6.2E-47 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 M634_03735 44208baa503725d3a1fd863a1fc27969 574 Gene3D G3DSA:3.40.50.970 365 574 6.0E-66 T 12-10-2018 M634_03735 44208baa503725d3a1fd863a1fc27969 574 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 5 569 4.6E-273 T 12-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 M634_03735 44208baa503725d3a1fd863a1fc27969 574 Gene3D G3DSA:3.40.50.1220 192 362 3.2E-60 T 12-10-2018 M634_03735 44208baa503725d3a1fd863a1fc27969 574 Gene3D G3DSA:3.40.50.970 1 183 1.8E-73 T 12-10-2018 M634_03735 44208baa503725d3a1fd863a1fc27969 574 SUPERFAMILY SSF52518 2 181 8.84E-65 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold M634_03735 44208baa503725d3a1fd863a1fc27969 574 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 433 452 - T 12-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 M634_03735 44208baa503725d3a1fd863a1fc27969 574 SUPERFAMILY SSF52518 372 567 3.99E-68 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold M634_21655 4ddb4c026c5b3810098882dae817e843 206 SUPERFAMILY SSF52172 7 132 5.41E-22 T 12-10-2018 IPR011006 CheY-like superfamily M634_21655 4ddb4c026c5b3810098882dae817e843 206 ProSitePatterns PS00622 LuxR-type HTH domain signature. 156 183 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_21655 4ddb4c026c5b3810098882dae817e843 206 Gene3D G3DSA:3.40.50.2300 7 132 5.2E-21 T 12-10-2018 M634_21655 4ddb4c026c5b3810098882dae817e843 206 SUPERFAMILY SSF46894 134 196 1.19E-15 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M634_21655 4ddb4c026c5b3810098882dae817e843 206 Pfam PF00072 Response regulator receiver domain 8 119 2.1E-20 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_21655 4ddb4c026c5b3810098882dae817e843 206 Gene3D G3DSA:1.10.10.10 133 198 1.1E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_21655 4ddb4c026c5b3810098882dae817e843 206 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 2.1E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_21655 4ddb4c026c5b3810098882dae817e843 206 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 2.1E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_21655 4ddb4c026c5b3810098882dae817e843 206 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 2.1E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_21655 4ddb4c026c5b3810098882dae817e843 206 SMART SM00421 139 196 2.1E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_21655 4ddb4c026c5b3810098882dae817e843 206 Pfam PF00196 Bacterial regulatory proteins, luxR family 141 194 1.8E-16 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_21655 4ddb4c026c5b3810098882dae817e843 206 SMART SM00448 6 119 2.6E-16 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_02800 420652fe513fbc99ed27d75c9b933593 706 SUPERFAMILY SSF55021 633 703 8.74E-7 T 12-10-2018 M634_02800 420652fe513fbc99ed27d75c9b933593 706 Gene3D G3DSA:1.10.3210.10 3 190 2.7E-80 T 12-10-2018 M634_02800 420652fe513fbc99ed27d75c9b933593 706 Pfam PF13328 HD domain 28 175 5.9E-54 T 12-10-2018 IPR003607 HD/PDEase domain M634_02800 420652fe513fbc99ed27d75c9b933593 706 Pfam PF13291 ACT domain 627 703 4.5E-14 T 12-10-2018 IPR002912 ACT domain M634_02800 420652fe513fbc99ed27d75c9b933593 706 SUPERFAMILY SSF81301 180 393 2.13E-59 T 12-10-2018 M634_02800 420652fe513fbc99ed27d75c9b933593 706 SUPERFAMILY SSF109604 3 190 2.54E-75 T 12-10-2018 M634_02800 420652fe513fbc99ed27d75c9b933593 706 Gene3D G3DSA:3.30.460.10 193 325 2.2E-46 T 12-10-2018 M634_02800 420652fe513fbc99ed27d75c9b933593 706 SMART SM00471 41 153 4.3E-11 T 12-10-2018 IPR003607 HD/PDEase domain M634_02800 420652fe513fbc99ed27d75c9b933593 706 Gene3D G3DSA:3.10.20.30 382 456 4.6E-29 T 12-10-2018 IPR012675 Beta-grasp domain superfamily M634_02800 420652fe513fbc99ed27d75c9b933593 706 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 27 702 3.6E-270 T 12-10-2018 IPR004811 RelA/SpoT family GO:0015969 M634_02800 420652fe513fbc99ed27d75c9b933593 706 SUPERFAMILY SSF81271 376 448 1.85E-20 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 M634_02800 420652fe513fbc99ed27d75c9b933593 706 Pfam PF02824 TGS domain 389 447 4.9E-19 T 12-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 M634_02800 420652fe513fbc99ed27d75c9b933593 706 SMART SM00954 235 345 6.9E-59 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 M634_02800 420652fe513fbc99ed27d75c9b933593 706 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 9.3E-35 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 M634_02800 420652fe513fbc99ed27d75c9b933593 706 Gene3D G3DSA:3.30.70.260 627 706 6.2E-13 T 12-10-2018 M634_14830 c4b4f49d28000bf097886eccc25f38a1 802 Gene3D G3DSA:2.60.420.10 721 801 4.4E-29 T 12-10-2018 M634_14830 c4b4f49d28000bf097886eccc25f38a1 802 Gene3D G3DSA:2.70.98.40 1 302 2.8E-116 T 12-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily M634_14830 c4b4f49d28000bf097886eccc25f38a1 802 SUPERFAMILY SSF48208 274 801 1.46E-109 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 M634_14830 c4b4f49d28000bf097886eccc25f38a1 802 Pfam PF06165 Glycosyltransferase family 36 21 267 1.8E-84 T 12-10-2018 IPR010383 Glycosyl hydrolase 94 M634_14830 c4b4f49d28000bf097886eccc25f38a1 802 SUPERFAMILY SSF74650 1 269 2.01E-82 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 M634_14830 c4b4f49d28000bf097886eccc25f38a1 802 SMART SM01068 1 63 2.3E-20 T 12-10-2018 IPR009342 Putative carbohydrate binding domain M634_14830 c4b4f49d28000bf097886eccc25f38a1 802 Gene3D G3DSA:1.50.10.10 311 720 2.1E-135 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 M634_14830 c4b4f49d28000bf097886eccc25f38a1 802 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 296 728 1.3E-209 T 12-10-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain M634_10750 04774709d7e19435e001013b349fd751 1014 SUPERFAMILY SSF82866 296 495 3.27E-32 T 12-10-2018 M634_10750 04774709d7e19435e001013b349fd751 1014 Gene3D G3DSA:3.30.70.1430 557 655 3.2E-242 T 12-10-2018 M634_10750 04774709d7e19435e001013b349fd751 1014 Gene3D G3DSA:1.20.1640.10 12 502 3.2E-242 T 12-10-2018 M634_10750 04774709d7e19435e001013b349fd751 1014 SUPERFAMILY SSF82693 557 641 5.49E-5 T 12-10-2018 M634_10750 04774709d7e19435e001013b349fd751 1014 SUPERFAMILY SSF82714 712 789 6.93E-11 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_10750 04774709d7e19435e001013b349fd751 1014 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 1.5E-23 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_10750 04774709d7e19435e001013b349fd751 1014 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.5E-23 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_10750 04774709d7e19435e001013b349fd751 1014 PRINTS PR00702 Acriflavin resistance protein family signature 468 491 1.5E-23 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_10750 04774709d7e19435e001013b349fd751 1014 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 1.5E-23 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_10750 04774709d7e19435e001013b349fd751 1014 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 1.5E-23 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_10750 04774709d7e19435e001013b349fd751 1014 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.5E-23 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_10750 04774709d7e19435e001013b349fd751 1014 SUPERFAMILY SSF82693 139 324 6.28E-19 T 12-10-2018 M634_10750 04774709d7e19435e001013b349fd751 1014 Gene3D G3DSA:3.30.70.1320 138 328 3.2E-242 T 12-10-2018 M634_10750 04774709d7e19435e001013b349fd751 1014 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 1.1E-161 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_10750 04774709d7e19435e001013b349fd751 1014 Gene3D G3DSA:3.30.70.1440 656 855 3.2E-242 T 12-10-2018 M634_10750 04774709d7e19435e001013b349fd751 1014 Gene3D G3DSA:3.30.70.1430 40 805 3.2E-242 T 12-10-2018 M634_10750 04774709d7e19435e001013b349fd751 1014 SUPERFAMILY SSF82866 791 1012 1.57E-44 T 12-10-2018 M634_10750 04774709d7e19435e001013b349fd751 1014 Gene3D G3DSA:3.30.2090.10 707 797 3.2E-242 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_10750 04774709d7e19435e001013b349fd751 1014 SUPERFAMILY SSF82714 187 269 1.16E-13 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_10750 04774709d7e19435e001013b349fd751 1014 SUPERFAMILY SSF82693 41 137 5.76E-17 T 12-10-2018 M634_10750 04774709d7e19435e001013b349fd751 1014 Gene3D G3DSA:3.30.2090.10 182 275 3.2E-242 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_10750 04774709d7e19435e001013b349fd751 1014 Gene3D G3DSA:1.20.1640.10 503 1005 3.2E-242 T 12-10-2018 M634_02650 ec65c3faa27e02fc4e883553bfb087b7 291 PIRSF PIRSF005261 1 284 5.7E-69 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 M634_02650 ec65c3faa27e02fc4e883553bfb087b7 291 Hamap MF_00117 33 kDa chaperonin [hslO]. 3 283 31.477 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 M634_02650 ec65c3faa27e02fc4e883553bfb087b7 291 SUPERFAMILY SSF64397 4 231 1.96E-75 T 12-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 M634_02650 ec65c3faa27e02fc4e883553bfb087b7 291 Gene3D G3DSA:1.10.287.480 178 224 2.0E-22 T 12-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily M634_02650 ec65c3faa27e02fc4e883553bfb087b7 291 Gene3D G3DSA:3.90.1280.10 225 284 2.0E-19 T 12-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 M634_02650 ec65c3faa27e02fc4e883553bfb087b7 291 Gene3D G3DSA:3.55.30.10 1 175 3.5E-62 T 12-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 M634_02650 ec65c3faa27e02fc4e883553bfb087b7 291 Pfam PF01430 Hsp33 protein 6 272 1.3E-77 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 M634_02650 ec65c3faa27e02fc4e883553bfb087b7 291 SUPERFAMILY SSF118352 223 281 1.44E-17 T 12-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 M634_19185 e3e7dd91a8d65f94e97f4b9b30e22a87 665 SUPERFAMILY SSF58104 355 664 5.75E-63 T 12-10-2018 M634_19185 e3e7dd91a8d65f94e97f4b9b30e22a87 665 SMART SM00283 402 663 4.5E-51 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_19185 e3e7dd91a8d65f94e97f4b9b30e22a87 665 Pfam PF08376 Nitrate and nitrite sensing 59 296 1.3E-36 T 12-10-2018 IPR013587 Nitrate/nitrite sensing protein M634_19185 e3e7dd91a8d65f94e97f4b9b30e22a87 665 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 500 527 2.6E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M634_19185 e3e7dd91a8d65f94e97f4b9b30e22a87 665 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 577 606 2.6E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M634_19185 e3e7dd91a8d65f94e97f4b9b30e22a87 665 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 529 558 2.6E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M634_19185 e3e7dd91a8d65f94e97f4b9b30e22a87 665 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 310 330 2.6E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M634_19185 e3e7dd91a8d65f94e97f4b9b30e22a87 665 Gene3D G3DSA:1.10.287.950 334 665 1.7E-60 T 12-10-2018 M634_19185 e3e7dd91a8d65f94e97f4b9b30e22a87 665 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 474 629 4.9E-39 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_17165 44d8e8be8637302503948c19885fddb1 89 Pfam PF01313 Bacterial export proteins, family 3 7 77 1.6E-25 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 M634_17165 44d8e8be8637302503948c19885fddb1 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 3.0E-13 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 M634_17165 44d8e8be8637302503948c19885fddb1 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 3.0E-13 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 M634_17165 44d8e8be8637302503948c19885fddb1 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 3.0E-13 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 M634_17165 44d8e8be8637302503948c19885fddb1 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 1.3E-28 T 12-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 M634_17165 44d8e8be8637302503948c19885fddb1 89 PIRSF PIRSF004669 1 89 1.4E-25 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 M634_13925 b3445b8301813269e0105b1c02428a9d 262 Gene3D G3DSA:1.20.1180.10 197 262 9.4E-22 T 12-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 M634_13925 b3445b8301813269e0105b1c02428a9d 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 6.6E-25 T 12-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 M634_13925 b3445b8301813269e0105b1c02428a9d 262 Gene3D G3DSA:2.160.10.10 1 196 9.9E-51 T 12-10-2018 M634_13925 b3445b8301813269e0105b1c02428a9d 262 PIRSF PIRSF000456 4 262 2.3E-96 T 12-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 M634_13925 b3445b8301813269e0105b1c02428a9d 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 5.1E-95 T 12-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 M634_13925 b3445b8301813269e0105b1c02428a9d 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 42.67 T 12-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 M634_13925 b3445b8301813269e0105b1c02428a9d 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 2 33 4.6E-6 T 12-10-2018 IPR001451 Hexapeptide repeat M634_13925 b3445b8301813269e0105b1c02428a9d 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 2.9E-7 T 12-10-2018 IPR001451 Hexapeptide repeat M634_13925 b3445b8301813269e0105b1c02428a9d 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 36 69 3.5E-5 T 12-10-2018 IPR001451 Hexapeptide repeat M634_13925 b3445b8301813269e0105b1c02428a9d 262 SUPERFAMILY SSF51161 1 262 6.22E-74 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily M634_14095 1126e9d3739452a68371397461523a1b 654 SMART SM00490 258 339 4.7E-28 T 12-10-2018 IPR001650 Helicase, C-terminal M634_14095 1126e9d3739452a68371397461523a1b 654 Gene3D G3DSA:1.10.10.10 513 654 1.2E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_14095 1126e9d3739452a68371397461523a1b 654 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 22 362 1.9E-112 T 12-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 M634_14095 1126e9d3739452a68371397461523a1b 654 Gene3D G3DSA:3.40.50.300 11 214 2.0E-68 T 12-10-2018 M634_14095 1126e9d3739452a68371397461523a1b 654 Pfam PF16124 RecQ zinc-binding 525 572 1.5E-8 T 12-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain M634_14095 1126e9d3739452a68371397461523a1b 654 Pfam PF00271 Helicase conserved C-terminal domain 245 338 2.7E-18 T 12-10-2018 IPR001650 Helicase, C-terminal M634_14095 1126e9d3739452a68371397461523a1b 654 SUPERFAMILY SSF52540 73 351 3.58E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_14095 1126e9d3739452a68371397461523a1b 654 Gene3D G3DSA:3.40.50.300 215 460 8.9E-45 T 12-10-2018 M634_14095 1126e9d3739452a68371397461523a1b 654 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 147 156 - T 12-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site M634_14095 1126e9d3739452a68371397461523a1b 654 Pfam PF00270 DEAD/DEAH box helicase 35 194 8.6E-15 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 M634_14095 1126e9d3739452a68371397461523a1b 654 SMART SM00487 28 224 1.8E-21 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M634_01785 34e545713225a8efe8f99d3f65ca5ab9 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 245 260 1.6E-35 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 M634_01785 34e545713225a8efe8f99d3f65ca5ab9 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 317 333 1.6E-35 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 M634_01785 34e545713225a8efe8f99d3f65ca5ab9 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 1.6E-35 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 M634_01785 34e545713225a8efe8f99d3f65ca5ab9 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 1.6E-35 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 M634_01785 34e545713225a8efe8f99d3f65ca5ab9 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 49 61 1.6E-35 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 M634_01785 34e545713225a8efe8f99d3f65ca5ab9 688 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 687 2.9E-296 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 M634_01785 34e545713225a8efe8f99d3f65ca5ab9 688 SUPERFAMILY SSF109604 351 489 5.81E-12 T 12-10-2018 M634_01785 34e545713225a8efe8f99d3f65ca5ab9 688 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 686 25.965 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 M634_01785 34e545713225a8efe8f99d3f65ca5ab9 688 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 549 9.3E-206 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 M634_01785 34e545713225a8efe8f99d3f65ca5ab9 688 Pfam PF05746 DALR anticodon binding domain 580 677 3.1E-10 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 M634_01835 c3d6d6405494e7d64296e28b78c4776c 248 SUPERFAMILY SSF53850 1 246 4.04E-58 T 12-10-2018 M634_01835 c3d6d6405494e7d64296e28b78c4776c 248 Gene3D G3DSA:3.40.190.10 91 204 7.8E-30 T 12-10-2018 M634_01835 c3d6d6405494e7d64296e28b78c4776c 248 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 46 59 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site M634_01835 c3d6d6405494e7d64296e28b78c4776c 248 SMART SM00062 24 245 3.8E-74 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M634_01835 c3d6d6405494e7d64296e28b78c4776c 248 SMART SM00079 24 244 0.0063 T 12-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 M634_01835 c3d6d6405494e7d64296e28b78c4776c 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 243 6.3E-56 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M634_04225 57aa300ede1503afb70b0175babccff5 151 Pfam PF05258 Protein of unknown function (DUF721) 11 85 7.5E-13 T 12-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 M634_04045 529fd5899231fb69408f92cf16acc9db 216 Gene3D G3DSA:3.90.79.10 1 208 1.2E-63 T 12-10-2018 M634_04045 529fd5899231fb69408f92cf16acc9db 216 ProSitePatterns PS00893 Nudix box signature. 96 117 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 M634_04045 529fd5899231fb69408f92cf16acc9db 216 Pfam PF00293 NUDIX domain 57 175 7.2E-11 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 M634_04045 529fd5899231fb69408f92cf16acc9db 216 SUPERFAMILY SSF55811 13 206 1.76E-44 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 M634_04045 529fd5899231fb69408f92cf16acc9db 216 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 15 198 3.6E-65 T 12-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 M634_00810 7782c437b1407cf24ebd3c0a8cddb4b0 467 SUPERFAMILY SSF55874 300 462 1.57E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_00810 7782c437b1407cf24ebd3c0a8cddb4b0 467 Gene3D G3DSA:3.30.450.210 36 161 4.1E-56 T 12-10-2018 IPR038515 CpxA, periplasmic domain superfamily M634_00810 7782c437b1407cf24ebd3c0a8cddb4b0 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 448 461 1.2E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_00810 7782c437b1407cf24ebd3c0a8cddb4b0 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 403 1.2E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_00810 7782c437b1407cf24ebd3c0a8cddb4b0 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 417 1.2E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_00810 7782c437b1407cf24ebd3c0a8cddb4b0 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 442 1.2E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_00810 7782c437b1407cf24ebd3c0a8cddb4b0 467 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 462 1.3E-18 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_00810 7782c437b1407cf24ebd3c0a8cddb4b0 467 SMART SM00387 354 464 2.8E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_00810 7782c437b1407cf24ebd3c0a8cddb4b0 467 Gene3D G3DSA:1.10.287.130 198 311 3.4E-33 T 12-10-2018 M634_00810 7782c437b1407cf24ebd3c0a8cddb4b0 467 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 41 172 2.0E-58 T 12-10-2018 IPR032404 Two-component sensor protein CpxA, periplasmic domain M634_00810 7782c437b1407cf24ebd3c0a8cddb4b0 467 Pfam PF00672 HAMP domain 195 242 2.0E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_00810 7782c437b1407cf24ebd3c0a8cddb4b0 467 Pfam PF00512 His Kinase A (phospho-acceptor) domain 249 308 3.1E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_00810 7782c437b1407cf24ebd3c0a8cddb4b0 467 SMART SM00388 248 310 5.3E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_00810 7782c437b1407cf24ebd3c0a8cddb4b0 467 SUPERFAMILY SSF47384 234 309 2.75E-13 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M634_00810 7782c437b1407cf24ebd3c0a8cddb4b0 467 Gene3D G3DSA:3.30.565.10 313 464 7.7E-36 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_00810 7782c437b1407cf24ebd3c0a8cddb4b0 467 SMART SM00304 194 247 9.6E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_04165 321c0907711977765f496b21cd5e2087 597 SUPERFAMILY SSF56519 86 258 5.23E-46 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 M634_04165 321c0907711977765f496b21cd5e2087 597 Gene3D G3DSA:3.90.1310.30 83 258 4.2E-46 T 12-10-2018 M634_04165 321c0907711977765f496b21cd5e2087 597 Pfam PF03717 Penicillin-binding Protein dimerisation domain 91 245 3.1E-20 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 M634_04165 321c0907711977765f496b21cd5e2087 597 SUPERFAMILY SSF56601 260 591 1.99E-91 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like M634_04165 321c0907711977765f496b21cd5e2087 597 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 43 595 44.788 T 12-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M634_04165 321c0907711977765f496b21cd5e2087 597 Gene3D G3DSA:3.40.710.10 320 502 1.3E-103 T 12-10-2018 M634_04165 321c0907711977765f496b21cd5e2087 597 Gene3D G3DSA:3.30.450.330 260 584 1.3E-103 T 12-10-2018 M634_04165 321c0907711977765f496b21cd5e2087 597 Pfam PF00905 Penicillin binding protein transpeptidase domain 284 580 4.2E-75 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 M634_02460 3554c4c08674e0e74b40f3fccc8ad94d 811 Pfam PF08448 PAS fold 156 262 1.8E-11 T 12-10-2018 IPR013656 PAS fold-4 M634_02460 3554c4c08674e0e74b40f3fccc8ad94d 811 Gene3D G3DSA:3.30.450.20 134 269 2.5E-20 T 12-10-2018 M634_02460 3554c4c08674e0e74b40f3fccc8ad94d 811 Gene3D G3DSA:3.30.450.20 270 392 4.8E-36 T 12-10-2018 M634_02460 3554c4c08674e0e74b40f3fccc8ad94d 811 SUPERFAMILY SSF55073 399 554 1.96E-45 T 12-10-2018 IPR029787 Nucleotide cyclase M634_02460 3554c4c08674e0e74b40f3fccc8ad94d 811 Pfam PF00563 EAL domain 568 803 5.1E-72 T 12-10-2018 IPR001633 EAL domain M634_02460 3554c4c08674e0e74b40f3fccc8ad94d 811 Gene3D G3DSA:3.30.70.270 393 565 7.2E-57 T 12-10-2018 M634_02460 3554c4c08674e0e74b40f3fccc8ad94d 811 Pfam PF00990 Diguanylate cyclase, GGDEF domain 394 547 2.5E-43 T 12-10-2018 IPR000160 GGDEF domain M634_02460 3554c4c08674e0e74b40f3fccc8ad94d 811 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 150 268 2.3E-8 T 12-10-2018 IPR000014 PAS domain M634_02460 3554c4c08674e0e74b40f3fccc8ad94d 811 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 273 390 1.6E-23 T 12-10-2018 IPR000014 PAS domain M634_02460 3554c4c08674e0e74b40f3fccc8ad94d 811 SMART SM00052 562 808 1.3E-116 T 12-10-2018 IPR001633 EAL domain M634_02460 3554c4c08674e0e74b40f3fccc8ad94d 811 SMART SM00091 146 212 2.4 T 12-10-2018 IPR000014 PAS domain M634_02460 3554c4c08674e0e74b40f3fccc8ad94d 811 SMART SM00091 269 336 1.5E-8 T 12-10-2018 IPR000014 PAS domain M634_02460 3554c4c08674e0e74b40f3fccc8ad94d 811 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 390 550 7.6E-39 T 12-10-2018 IPR000160 GGDEF domain M634_02460 3554c4c08674e0e74b40f3fccc8ad94d 811 SMART SM00267 383 552 4.0E-61 T 12-10-2018 IPR000160 GGDEF domain M634_02460 3554c4c08674e0e74b40f3fccc8ad94d 811 SUPERFAMILY SSF55785 277 380 1.68E-28 T 12-10-2018 IPR035965 PAS domain superfamily M634_02460 3554c4c08674e0e74b40f3fccc8ad94d 811 SMART SM00086 341 383 1.4E-7 T 12-10-2018 IPR001610 PAC motif M634_02460 3554c4c08674e0e74b40f3fccc8ad94d 811 SMART SM00086 219 261 3.9 T 12-10-2018 IPR001610 PAC motif M634_02460 3554c4c08674e0e74b40f3fccc8ad94d 811 SUPERFAMILY SSF141868 568 809 2.35E-87 T 12-10-2018 IPR035919 EAL domain superfamily M634_02460 3554c4c08674e0e74b40f3fccc8ad94d 811 Gene3D G3DSA:3.20.20.450 566 811 6.9E-99 T 12-10-2018 IPR035919 EAL domain superfamily M634_02460 3554c4c08674e0e74b40f3fccc8ad94d 811 Pfam PF00989 PAS fold 273 380 1.5E-18 T 12-10-2018 IPR013767 PAS fold GO:0006355 M634_02460 3554c4c08674e0e74b40f3fccc8ad94d 811 SUPERFAMILY SSF55785 152 262 8.2E-17 T 12-10-2018 IPR035965 PAS domain superfamily M634_03450 eb650f7ce5b094c5639972acfeae1713 291 Gene3D G3DSA:3.40.1010.10 36 152 1.3E-44 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 M634_03450 eb650f7ce5b094c5639972acfeae1713 291 SUPERFAMILY SSF53790 33 279 6.02E-80 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 M634_03450 eb650f7ce5b094c5639972acfeae1713 291 Gene3D G3DSA:3.30.950.10 153 290 7.6E-45 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 M634_03450 eb650f7ce5b094c5639972acfeae1713 291 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 39 248 6.3E-46 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 M634_03450 eb650f7ce5b094c5639972acfeae1713 291 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 42 56 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 M634_03450 eb650f7ce5b094c5639972acfeae1713 291 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 37 270 1.4E-93 T 12-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 M634_22005 6ec846db31f8f440a7e193dda1c14822 361 Gene3D G3DSA:2.40.30.170 62 282 2.9E-75 T 12-10-2018 M634_22005 6ec846db31f8f440a7e193dda1c14822 361 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 45 355 1.8E-72 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 M634_22005 6ec846db31f8f440a7e193dda1c14822 361 SUPERFAMILY SSF111369 61 278 3.53E-32 T 12-10-2018 M634_22005 6ec846db31f8f440a7e193dda1c14822 361 Pfam PF13533 Biotin-lipoyl like 72 116 3.7E-12 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain M634_22005 6ec846db31f8f440a7e193dda1c14822 361 Pfam PF13437 HlyD family secretion protein 166 267 1.5E-11 T 12-10-2018 M634_22005 6ec846db31f8f440a7e193dda1c14822 361 Gene3D G3DSA:1.10.287.470 103 162 2.9E-75 T 12-10-2018 M634_22005 6ec846db31f8f440a7e193dda1c14822 361 Gene3D G3DSA:2.40.420.20 283 352 2.9E-75 T 12-10-2018 M634_22005 6ec846db31f8f440a7e193dda1c14822 361 Gene3D G3DSA:2.40.50.100 69 201 2.9E-75 T 12-10-2018 M634_15880 52042bc138372e7a73b424410dce1230 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_15880 52042bc138372e7a73b424410dce1230 241 SUPERFAMILY SSF52540 3 237 4.97E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_15880 52042bc138372e7a73b424410dce1230 241 SMART SM00382 28 231 2.4E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_15880 52042bc138372e7a73b424410dce1230 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 241 4.0E-126 T 12-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 M634_15880 52042bc138372e7a73b424410dce1230 241 Gene3D G3DSA:3.40.50.300 2 241 1.5E-72 T 12-10-2018 M634_15880 52042bc138372e7a73b424410dce1230 241 Pfam PF00005 ABC transporter 20 166 9.8E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_15880 52042bc138372e7a73b424410dce1230 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 236 4.6E-9 T 12-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal M634_09710 cd5cfc165df7a03be020ceb91cf87012 168 SUPERFAMILY SSF48403 11 161 2.18E-20 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily M634_09710 cd5cfc165df7a03be020ceb91cf87012 168 Gene3D G3DSA:1.25.40.20 2 163 9.4E-25 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily M634_09710 cd5cfc165df7a03be020ceb91cf87012 168 SMART SM00248 34 67 44.0 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 M634_09710 cd5cfc165df7a03be020ceb91cf87012 168 SMART SM00248 104 133 0.064 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 M634_09710 cd5cfc165df7a03be020ceb91cf87012 168 SMART SM00248 72 101 4.0 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 M634_09710 cd5cfc165df7a03be020ceb91cf87012 168 Pfam PF12796 Ankyrin repeats (3 copies) 43 132 7.3E-14 T 12-10-2018 IPR020683 Ankyrin repeat-containing domain M634_06695 950e8447808fdad7d67603b1266a5a1a 196 SUPERFAMILY SSF46689 4 77 5.82E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_06695 950e8447808fdad7d67603b1266a5a1a 196 Gene3D G3DSA:1.10.357.10 1 192 1.8E-40 T 12-10-2018 M634_06695 950e8447808fdad7d67603b1266a5a1a 196 SUPERFAMILY SSF48498 82 195 3.0E-19 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily M634_06695 950e8447808fdad7d67603b1266a5a1a 196 Pfam PF13305 WHG domain 93 172 2.8E-10 T 12-10-2018 IPR025996 WHG domain M634_16825 4b66b3d95e234e0bd05d324c639097b2 471 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 325 337 - T 12-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal M634_16825 4b66b3d95e234e0bd05d324c639097b2 471 Gene3D G3DSA:3.40.50.620 3 204 2.4E-77 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M634_16825 4b66b3d95e234e0bd05d324c639097b2 471 Gene3D G3DSA:1.25.40.80 133 286 2.4E-77 T 12-10-2018 M634_16825 4b66b3d95e234e0bd05d324c639097b2 471 PRINTS PR00147 DNA photolyase signature 325 341 7.7E-30 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 M634_16825 4b66b3d95e234e0bd05d324c639097b2 471 PRINTS PR00147 DNA photolyase signature 384 398 7.7E-30 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 M634_16825 4b66b3d95e234e0bd05d324c639097b2 471 PRINTS PR00147 DNA photolyase signature 345 363 7.7E-30 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 M634_16825 4b66b3d95e234e0bd05d324c639097b2 471 PRINTS PR00147 DNA photolyase signature 142 158 7.7E-30 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 M634_16825 4b66b3d95e234e0bd05d324c639097b2 471 Pfam PF00875 DNA photolyase 3 165 3.6E-45 T 12-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 M634_16825 4b66b3d95e234e0bd05d324c639097b2 471 SUPERFAMILY SSF52425 1 185 1.01E-50 T 12-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 M634_16825 4b66b3d95e234e0bd05d324c639097b2 471 SUPERFAMILY SSF48173 194 470 9.81E-106 T 12-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 M634_16825 4b66b3d95e234e0bd05d324c639097b2 471 Gene3D G3DSA:1.10.579.10 293 471 1.2E-79 T 12-10-2018 M634_16825 4b66b3d95e234e0bd05d324c639097b2 471 Pfam PF03441 FAD binding domain of DNA photolyase 275 467 1.5E-80 T 12-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 M634_16825 4b66b3d95e234e0bd05d324c639097b2 471 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 345 364 - T 12-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal M634_16760 abce3f105529e00fe6072df84e2ab712 249 Pfam PF00005 ABC transporter 19 174 1.1E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_16760 abce3f105529e00fe6072df84e2ab712 249 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 4 249 1.8E-126 T 12-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 M634_16760 abce3f105529e00fe6072df84e2ab712 249 Gene3D G3DSA:3.40.50.300 4 246 3.1E-62 T 12-10-2018 M634_16760 abce3f105529e00fe6072df84e2ab712 249 SUPERFAMILY SSF52540 4 236 1.59E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_16760 abce3f105529e00fe6072df84e2ab712 249 SMART SM00382 28 220 1.3E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_16760 abce3f105529e00fe6072df84e2ab712 249 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_16875 2207e7486777f6ff0313de416e7c324c 579 SUPERFAMILY SSF52540 297 527 3.7E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_16875 2207e7486777f6ff0313de416e7c324c 579 Gene3D G3DSA:3.40.50.300 1 254 3.7E-68 T 12-10-2018 M634_16875 2207e7486777f6ff0313de416e7c324c 579 ProSitePatterns PS00211 ABC transporters family signature. 433 447 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_16875 2207e7486777f6ff0313de416e7c324c 579 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_16875 2207e7486777f6ff0313de416e7c324c 579 SUPERFAMILY SSF52540 2 235 1.13E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_16875 2207e7486777f6ff0313de416e7c324c 579 Pfam PF12558 ATP-binding cassette cobalt transporter 235 306 1.2E-20 T 12-10-2018 IPR022216 Putative ABC cobalt transporter M634_16875 2207e7486777f6ff0313de416e7c324c 579 Pfam PF00005 ABC transporter 315 461 2.4E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_16875 2207e7486777f6ff0313de416e7c324c 579 Pfam PF00005 ABC transporter 20 170 6.5E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_16875 2207e7486777f6ff0313de416e7c324c 579 SMART SM00382 324 510 1.0E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_16875 2207e7486777f6ff0313de416e7c324c 579 SMART SM00382 29 221 2.6E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_16875 2207e7486777f6ff0313de416e7c324c 579 Gene3D G3DSA:3.40.50.300 295 577 7.1E-65 T 12-10-2018 M634_12015 52769c3bb97f55333e7da589fd9d14c3 332 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 5 329 4.6E-130 T 12-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 M634_12015 52769c3bb97f55333e7da589fd9d14c3 332 Pfam PF02885 Glycosyl transferase family, helical bundle domain 4 63 6.8E-17 T 12-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 M634_12015 52769c3bb97f55333e7da589fd9d14c3 332 SUPERFAMILY SSF52418 70 329 6.15E-96 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 M634_12015 52769c3bb97f55333e7da589fd9d14c3 332 Gene3D G3DSA:1.20.970.10 10 183 1.1E-125 T 12-10-2018 M634_12015 52769c3bb97f55333e7da589fd9d14c3 332 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 331 40.299 T 12-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 M634_12015 52769c3bb97f55333e7da589fd9d14c3 332 Pfam PF00591 Glycosyl transferase family, a/b domain 72 322 2.2E-107 T 12-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 M634_12015 52769c3bb97f55333e7da589fd9d14c3 332 SUPERFAMILY SSF47648 2 67 2.62E-19 T 12-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 M634_12015 52769c3bb97f55333e7da589fd9d14c3 332 Gene3D G3DSA:3.40.1030.10 67 321 1.1E-125 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 M634_15465 90eda6a3f77df192427398c6f30ae95f 243 SUPERFAMILY SSF88697 2 70 3.98E-17 T 12-10-2018 IPR015947 PUA-like superfamily M634_15465 90eda6a3f77df192427398c6f30ae95f 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 9.6E-86 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 M634_15465 90eda6a3f77df192427398c6f30ae95f 243 Gene3D G3DSA:3.40.1280.10 74 243 2.9E-66 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal M634_15465 90eda6a3f77df192427398c6f30ae95f 243 SUPERFAMILY SSF75217 75 242 3.79E-53 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases M634_15465 90eda6a3f77df192427398c6f30ae95f 243 PIRSF PIRSF015601 2 242 1.7E-56 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 M634_15465 90eda6a3f77df192427398c6f30ae95f 243 Pfam PF04452 RNA methyltransferase 19 236 4.3E-75 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 M634_15465 90eda6a3f77df192427398c6f30ae95f 243 Gene3D G3DSA:2.40.240.20 1 71 3.2E-22 T 12-10-2018 M634_18055 a5778edc54986055cb20ac1ebd910737 189 SUPERFAMILY SSF55729 14 187 2.51E-39 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_18055 a5778edc54986055cb20ac1ebd910737 189 Gene3D G3DSA:3.40.630.30 6 188 3.1E-41 T 12-10-2018 M634_18055 a5778edc54986055cb20ac1ebd910737 189 Pfam PF13302 Acetyltransferase (GNAT) domain 18 162 9.8E-23 T 12-10-2018 IPR000182 GNAT domain M634_16940 d3b0bba0a1e119ba54be050326666498 677 Pfam PF00326 Prolyl oligopeptidase family 459 673 1.0E-69 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 M634_16940 d3b0bba0a1e119ba54be050326666498 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 583 598 8.5E-60 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M634_16940 d3b0bba0a1e119ba54be050326666498 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 443 461 8.5E-60 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M634_16940 d3b0bba0a1e119ba54be050326666498 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 469 493 8.5E-60 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M634_16940 d3b0bba0a1e119ba54be050326666498 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 497 516 8.5E-60 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M634_16940 d3b0bba0a1e119ba54be050326666498 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 527 547 8.5E-60 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M634_16940 d3b0bba0a1e119ba54be050326666498 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 602 624 8.5E-60 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M634_16940 d3b0bba0a1e119ba54be050326666498 677 Gene3D G3DSA:3.40.50.1820 12 642 3.9E-245 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_16940 d3b0bba0a1e119ba54be050326666498 677 SUPERFAMILY SSF50993 1 408 2.62E-93 T 12-10-2018 M634_16940 d3b0bba0a1e119ba54be050326666498 677 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 504 534 - T 12-10-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 M634_16940 d3b0bba0a1e119ba54be050326666498 677 Gene3D G3DSA:2.130.10.120 70 403 3.9E-245 T 12-10-2018 M634_16940 d3b0bba0a1e119ba54be050326666498 677 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 5 401 1.1E-120 T 12-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 M634_16940 d3b0bba0a1e119ba54be050326666498 677 SUPERFAMILY SSF53474 411 651 3.62E-49 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_12500 e5f2995eba8eb4cbafa0b0292d6a913a 193 Gene3D G3DSA:3.90.950.10 5 193 4.5E-57 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like M634_12500 e5f2995eba8eb4cbafa0b0292d6a913a 193 TIGRFAM TIGR00172 maf: septum formation protein Maf 4 186 3.3E-51 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 M634_12500 e5f2995eba8eb4cbafa0b0292d6a913a 193 Hamap MF_00528 Septum formation protein Maf [maf]. 5 192 29.67 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 M634_12500 e5f2995eba8eb4cbafa0b0292d6a913a 193 PIRSF PIRSF006305 1 193 2.7E-44 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 M634_12500 e5f2995eba8eb4cbafa0b0292d6a913a 193 Pfam PF02545 Maf-like protein 5 187 1.9E-44 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 M634_12500 e5f2995eba8eb4cbafa0b0292d6a913a 193 SUPERFAMILY SSF52972 1 187 3.6E-59 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like M634_11975 1df16027c81df419de031db6ea97d473 106 Gene3D G3DSA:3.10.450.140 5 105 9.6E-43 T 12-10-2018 IPR036763 Putative dsDNA mimic superfamily M634_11975 1df16027c81df419de031db6ea97d473 106 SUPERFAMILY SSF102816 3 105 1.27E-49 T 12-10-2018 IPR036763 Putative dsDNA mimic superfamily M634_11975 1df16027c81df419de031db6ea97d473 106 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 8 104 1.0E-50 T 12-10-2018 IPR007376 dsDNA mimic, putative M634_11975 1df16027c81df419de031db6ea97d473 106 Pfam PF04269 Protein of unknown function, DUF440 5 105 1.7E-45 T 12-10-2018 IPR007376 dsDNA mimic, putative M634_11975 1df16027c81df419de031db6ea97d473 106 Hamap MF_00680 UPF0263 protein YciU [yciU]. 1 106 36.277 T 12-10-2018 IPR007376 dsDNA mimic, putative M634_11975 1df16027c81df419de031db6ea97d473 106 PIRSF PIRSF004916 1 105 4.6E-53 T 12-10-2018 IPR007376 dsDNA mimic, putative M634_07420 9b9d50910c73a9db6b430662ac97c3d0 256 PIRSF PIRSF020736 2 256 8.8E-93 T 12-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 M634_07420 9b9d50910c73a9db6b430662ac97c3d0 256 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 10 252 5.2E-121 T 12-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 M634_07420 9b9d50910c73a9db6b430662ac97c3d0 256 Gene3D G3DSA:1.20.1260.10 96 256 3.5E-56 T 12-10-2018 IPR012347 Ferritin-like M634_07420 9b9d50910c73a9db6b430662ac97c3d0 256 Gene3D G3DSA:1.20.1260.10 7 76 1.3E-16 T 12-10-2018 IPR012347 Ferritin-like M634_07420 9b9d50910c73a9db6b430662ac97c3d0 256 SUPERFAMILY SSF47240 11 255 1.4E-74 T 12-10-2018 IPR009078 Ferritin-like superfamily M634_17080 d4e02db088651c5880b798b2250331f3 129 Pfam PF07361 Cytochrome b562 24 119 3.6E-30 T 12-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 M634_17080 d4e02db088651c5880b798b2250331f3 129 SUPERFAMILY SSF47175 24 119 2.94E-30 T 12-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 M634_17080 d4e02db088651c5880b798b2250331f3 129 Gene3D G3DSA:1.20.120.10 18 126 4.1E-14 T 12-10-2018 M634_17000 bfa57cbe7bf5fd08dbb8eb149600a269 343 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 5 342 1.3E-181 T 12-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 M634_17000 bfa57cbe7bf5fd08dbb8eb149600a269 343 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 136 2.6E-32 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 M634_17000 bfa57cbe7bf5fd08dbb8eb149600a269 343 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 3 342 60.964 T 12-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 M634_17000 bfa57cbe7bf5fd08dbb8eb149600a269 343 Gene3D G3DSA:3.40.50.720 155 288 5.1E-120 T 12-10-2018 M634_17000 bfa57cbe7bf5fd08dbb8eb149600a269 343 SUPERFAMILY SSF50129 3 175 2.89E-53 T 12-10-2018 IPR011032 GroES-like superfamily M634_17000 bfa57cbe7bf5fd08dbb8eb149600a269 343 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 M634_17000 bfa57cbe7bf5fd08dbb8eb149600a269 343 SUPERFAMILY SSF51735 143 307 4.49E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_17000 bfa57cbe7bf5fd08dbb8eb149600a269 343 SMART SM00829 14 340 5.3E-5 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 M634_17000 bfa57cbe7bf5fd08dbb8eb149600a269 343 Gene3D G3DSA:3.90.180.10 22 330 5.1E-120 T 12-10-2018 M634_17000 bfa57cbe7bf5fd08dbb8eb149600a269 343 Pfam PF00107 Zinc-binding dehydrogenase 176 303 3.2E-28 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 M634_02340 0e2f900f7babc3c42b37322959e8aa08 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 287 309 5.3E-29 T 12-10-2018 M634_02340 0e2f900f7babc3c42b37322959e8aa08 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 191 5.3E-29 T 12-10-2018 M634_02340 0e2f900f7babc3c42b37322959e8aa08 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 136 154 5.3E-29 T 12-10-2018 M634_02340 0e2f900f7babc3c42b37322959e8aa08 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 274 5.3E-29 T 12-10-2018 M634_02340 0e2f900f7babc3c42b37322959e8aa08 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 5.3E-29 T 12-10-2018 M634_02340 0e2f900f7babc3c42b37322959e8aa08 455 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 8 455 2.6E-215 T 12-10-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 M634_02340 0e2f900f7babc3c42b37322959e8aa08 455 SUPERFAMILY SSF55424 341 455 4.47E-35 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 M634_02340 0e2f900f7babc3c42b37322959e8aa08 455 SUPERFAMILY SSF51905 4 369 5.61E-59 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_02340 0e2f900f7babc3c42b37322959e8aa08 455 PIRSF PIRSF000350 2 449 1.8E-83 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 M634_02340 0e2f900f7babc3c42b37322959e8aa08 455 Gene3D G3DSA:3.30.390.30 343 455 2.3E-47 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 M634_02340 0e2f900f7babc3c42b37322959e8aa08 455 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 344 454 7.4E-33 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 M634_02340 0e2f900f7babc3c42b37322959e8aa08 455 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 10 323 1.3E-70 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 M634_02340 0e2f900f7babc3c42b37322959e8aa08 455 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 43 53 - T 12-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 M634_02340 0e2f900f7babc3c42b37322959e8aa08 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 173 198 8.1E-64 T 12-10-2018 M634_02340 0e2f900f7babc3c42b37322959e8aa08 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 259 273 8.1E-64 T 12-10-2018 M634_02340 0e2f900f7babc3c42b37322959e8aa08 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 8.1E-64 T 12-10-2018 M634_02340 0e2f900f7babc3c42b37322959e8aa08 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 8.1E-64 T 12-10-2018 M634_02340 0e2f900f7babc3c42b37322959e8aa08 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 302 309 8.1E-64 T 12-10-2018 M634_02340 0e2f900f7babc3c42b37322959e8aa08 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 139 148 8.1E-64 T 12-10-2018 M634_02340 0e2f900f7babc3c42b37322959e8aa08 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 340 361 8.1E-64 T 12-10-2018 M634_02340 0e2f900f7babc3c42b37322959e8aa08 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 429 449 8.1E-64 T 12-10-2018 M634_02340 0e2f900f7babc3c42b37322959e8aa08 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 42 57 8.1E-64 T 12-10-2018 M634_02340 0e2f900f7babc3c42b37322959e8aa08 455 Gene3D G3DSA:3.50.50.60 148 265 1.2E-126 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_02340 0e2f900f7babc3c42b37322959e8aa08 455 Gene3D G3DSA:3.50.50.60 9 319 1.2E-126 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_02795 90a6403a1f1032908b039075839c299c 227 SUPERFAMILY SSF75217 4 173 4.45E-46 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases M634_02795 90a6403a1f1032908b039075839c299c 227 Pfam PF12105 SpoU, rRNA methylase, C-terminal 162 217 4.4E-25 T 12-10-2018 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 M634_02795 90a6403a1f1032908b039075839c299c 227 Pfam PF00588 SpoU rRNA Methylase family 20 158 1.1E-34 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 M634_02795 90a6403a1f1032908b039075839c299c 227 Gene3D G3DSA:3.40.1280.10 1 204 1.1E-58 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal M634_02795 90a6403a1f1032908b039075839c299c 227 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 2 196 34.927 T 12-10-2018 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 M634_20785 382407bf967c9dcbe395ef7a22ca5f99 250 PIRSF PIRSF000090 1 249 1.2E-81 T 12-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 M634_20785 382407bf967c9dcbe395ef7a22ca5f99 250 SUPERFAMILY SSF52402 2 242 4.74E-82 T 12-10-2018 M634_20785 382407bf967c9dcbe395ef7a22ca5f99 250 Gene3D G3DSA:3.40.50.620 1 247 3.5E-85 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M634_20785 382407bf967c9dcbe395ef7a22ca5f99 250 SMART SM00893 23 211 3.4E-67 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 M634_20785 382407bf967c9dcbe395ef7a22ca5f99 250 Pfam PF01012 Electron transfer flavoprotein domain 26 205 3.1E-46 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 M634_03325 c15f837e88612bc3571fe866ebb65f44 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 12-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03325 c15f837e88612bc3571fe866ebb65f44 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 80 25.48 T 12-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_03325 c15f837e88612bc3571fe866ebb65f44 84 Gene3D G3DSA:2.40.50.140 1 84 4.1E-38 T 12-10-2018 M634_03325 c15f837e88612bc3571fe866ebb65f44 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 5 76 2.1E-38 T 12-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_03325 c15f837e88612bc3571fe866ebb65f44 84 Pfam PF00366 Ribosomal protein S17 10 77 7.2E-35 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_03325 c15f837e88612bc3571fe866ebb65f44 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 5 76 3.0E-37 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_03325 c15f837e88612bc3571fe866ebb65f44 84 SUPERFAMILY SSF50249 6 83 5.57E-34 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_03325 c15f837e88612bc3571fe866ebb65f44 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 1.4E-14 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_03325 c15f837e88612bc3571fe866ebb65f44 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 1.4E-14 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_03325 c15f837e88612bc3571fe866ebb65f44 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 1.4E-14 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_05545 1fe57d3ed32bb8863070b6c52cd0a233 857 Gene3D G3DSA:3.40.50.620 33 564 0.0 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M634_05545 1fe57d3ed32bb8863070b6c52cd0a233 857 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 856 23.473 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 M634_05545 1fe57d3ed32bb8863070b6c52cd0a233 857 SUPERFAMILY SSF52374 4 666 3.11E-147 T 12-10-2018 M634_05545 1fe57d3ed32bb8863070b6c52cd0a233 857 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 M634_05545 1fe57d3ed32bb8863070b6c52cd0a233 857 Gene3D G3DSA:3.90.740.10 227 413 0.0 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 M634_05545 1fe57d3ed32bb8863070b6c52cd0a233 857 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 2.7E-79 T 12-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 M634_05545 1fe57d3ed32bb8863070b6c52cd0a233 857 Gene3D G3DSA:3.10.20.590 796 856 1.2E-24 T 12-10-2018 M634_05545 1fe57d3ed32bb8863070b6c52cd0a233 857 SUPERFAMILY SSF47323 660 856 1.12E-36 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 M634_05545 1fe57d3ed32bb8863070b6c52cd0a233 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 7.2E-52 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 M634_05545 1fe57d3ed32bb8863070b6c52cd0a233 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 7.2E-52 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 M634_05545 1fe57d3ed32bb8863070b6c52cd0a233 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 484 502 7.2E-52 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 M634_05545 1fe57d3ed32bb8863070b6c52cd0a233 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 522 544 7.2E-52 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 M634_05545 1fe57d3ed32bb8863070b6c52cd0a233 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 555 565 7.2E-52 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 M634_05545 1fe57d3ed32bb8863070b6c52cd0a233 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 7.2E-52 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 M634_05545 1fe57d3ed32bb8863070b6c52cd0a233 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 7.2E-52 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 M634_05545 1fe57d3ed32bb8863070b6c52cd0a233 857 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 856 0.0 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 M634_05545 1fe57d3ed32bb8863070b6c52cd0a233 857 Gene3D G3DSA:3.10.330.110 565 626 0.0 T 12-10-2018 M634_05545 1fe57d3ed32bb8863070b6c52cd0a233 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 172 4.0E-26 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 M634_05545 1fe57d3ed32bb8863070b6c52cd0a233 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 617 649 2.0E-7 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 M634_05545 1fe57d3ed32bb8863070b6c52cd0a233 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 417 570 1.5E-9 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 M634_05545 1fe57d3ed32bb8863070b6c52cd0a233 857 SUPERFAMILY SSF50677 226 414 8.79E-57 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 M634_05545 1fe57d3ed32bb8863070b6c52cd0a233 857 Pfam PF08264 Anticodon-binding domain of tRNA 699 820 2.0E-17 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 M634_05545 1fe57d3ed32bb8863070b6c52cd0a233 857 Gene3D G3DSA:1.10.730.10 8 788 0.0 T 12-10-2018 M634_16665 2b286e0ffdcb136baac2d3ab2ccf8556 655 Gene3D G3DSA:1.10.3470.10 338 654 2.0E-68 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M634_16665 2b286e0ffdcb136baac2d3ab2ccf8556 655 Gene3D G3DSA:1.10.3470.10 3 328 1.6E-61 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M634_16665 2b286e0ffdcb136baac2d3ab2ccf8556 655 SUPERFAMILY SSF81345 356 651 9.02E-62 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M634_16665 2b286e0ffdcb136baac2d3ab2ccf8556 655 Pfam PF01032 FecCD transport family 13 323 1.1E-62 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 M634_16665 2b286e0ffdcb136baac2d3ab2ccf8556 655 Pfam PF01032 FecCD transport family 377 651 2.3E-67 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 M634_16665 2b286e0ffdcb136baac2d3ab2ccf8556 655 SUPERFAMILY SSF81345 9 323 7.19E-56 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M634_12540 b549852bf9c056f2651a0749ce8c58e4 358 SUPERFAMILY SSF52540 88 318 1.61E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_12540 b549852bf9c056f2651a0749ce8c58e4 358 Gene3D G3DSA:3.40.50.300 80 336 2.6E-83 T 12-10-2018 M634_12540 b549852bf9c056f2651a0749ce8c58e4 358 Hamap MF_02040 Iron-sulfur cluster carrier protein. 89 338 36.482 T 12-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein M634_12540 b549852bf9c056f2651a0749ce8c58e4 358 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 94 337 7.5E-99 T 12-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 M634_12540 b549852bf9c056f2651a0749ce8c58e4 358 ProSitePatterns PS01215 Mrp family signature. 201 217 - T 12-10-2018 IPR000808 Mrp, conserved site GO:0005524 M634_08340 fe6969392370312130abe0755f97f16c 262 Gene3D G3DSA:1.10.357.10 22 212 1.5E-17 T 12-10-2018 M634_08340 fe6969392370312130abe0755f97f16c 262 Pfam PF00440 Bacterial regulatory proteins, tetR family 35 81 7.4E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M634_08340 fe6969392370312130abe0755f97f16c 262 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 48 1.1E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M634_08340 fe6969392370312130abe0755f97f16c 262 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 56 79 1.1E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M634_08340 fe6969392370312130abe0755f97f16c 262 SUPERFAMILY SSF46689 27 86 4.0E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_24585 dfcd955223572891d411c71bd6acd4a3 322 Gene3D G3DSA:1.10.3720.10 92 315 3.9E-13 T 12-10-2018 IPR035906 MetI-like superfamily M634_24585 dfcd955223572891d411c71bd6acd4a3 322 SUPERFAMILY SSF161098 97 303 1.83E-9 T 12-10-2018 IPR035906 MetI-like superfamily M634_24585 dfcd955223572891d411c71bd6acd4a3 322 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 317 1.2E-38 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_04815 779abc879c316efe055c252e3ec902a3 542 Gene3D G3DSA:1.20.1220.12 421 542 1.6E-50 T 12-10-2018 M634_04815 779abc879c316efe055c252e3ec902a3 542 Gene3D G3DSA:3.20.20.360 11 420 1.5E-190 T 12-10-2018 M634_04815 779abc879c316efe055c252e3ec902a3 542 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 32 541 4.1E-265 T 12-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 M634_04815 779abc879c316efe055c252e3ec902a3 542 Pfam PF01274 Malate synthase 21 541 3.2E-203 T 12-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 M634_04815 779abc879c316efe055c252e3ec902a3 542 PIRSF PIRSF001363 10 542 1.9E-253 T 12-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 M634_04815 779abc879c316efe055c252e3ec902a3 542 SUPERFAMILY SSF51645 8 541 1.31E-188 T 12-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 M634_04815 779abc879c316efe055c252e3ec902a3 542 ProSitePatterns PS00510 Malate synthase signature. 275 290 - T 12-10-2018 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 M634_14835 6c04910f6995b941f7b586cc6664da9f 470 SUPERFAMILY SSF53738 2 187 1.39E-39 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_14835 6c04910f6995b941f7b586cc6664da9f 470 Gene3D G3DSA:3.40.120.10 263 368 1.3E-60 T 12-10-2018 M634_14835 6c04910f6995b941f7b586cc6664da9f 470 Gene3D G3DSA:3.30.310.50 369 469 6.9E-16 T 12-10-2018 M634_14835 6c04910f6995b941f7b586cc6664da9f 470 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 2 137 1.2E-36 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_14835 6c04910f6995b941f7b586cc6664da9f 470 Gene3D G3DSA:3.40.120.10 171 365 1.3E-60 T 12-10-2018 M634_14835 6c04910f6995b941f7b586cc6664da9f 470 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 267 378 5.3E-26 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_14835 6c04910f6995b941f7b586cc6664da9f 470 SUPERFAMILY SSF53738 250 379 2.0E-30 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_14835 6c04910f6995b941f7b586cc6664da9f 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 2.1E-11 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_14835 6c04910f6995b941f7b586cc6664da9f 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 214 227 2.1E-11 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_14835 6c04910f6995b941f7b586cc6664da9f 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 242 257 2.1E-11 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_14835 6c04910f6995b941f7b586cc6664da9f 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 180 199 2.1E-11 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_14835 6c04910f6995b941f7b586cc6664da9f 470 Gene3D G3DSA:3.40.120.10 1 170 4.7E-47 T 12-10-2018 M634_14835 6c04910f6995b941f7b586cc6664da9f 470 SUPERFAMILY SSF55957 374 466 4.45E-18 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_14835 6c04910f6995b941f7b586cc6664da9f 470 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 417 466 7.5E-10 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_14835 6c04910f6995b941f7b586cc6664da9f 470 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 162 262 1.2E-24 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 M634_19785 ba3879c5ccd4a35b1e973a0cea06172e 674 Pfam PF00009 Elongation factor Tu GTP binding domain 5 259 1.6E-29 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_19785 ba3879c5ccd4a35b1e973a0cea06172e 674 SUPERFAMILY SSF52540 2 259 1.89E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_19785 ba3879c5ccd4a35b1e973a0cea06172e 674 SUPERFAMILY SSF54211 457 577 1.21E-37 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M634_19785 ba3879c5ccd4a35b1e973a0cea06172e 674 Pfam PF03764 Elongation factor G, domain IV 457 575 1.4E-36 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 M634_19785 ba3879c5ccd4a35b1e973a0cea06172e 674 Pfam PF14492 Elongation Factor G, domain II 382 454 1.3E-21 T 12-10-2018 M634_19785 ba3879c5ccd4a35b1e973a0cea06172e 674 Gene3D G3DSA:3.30.230.10 463 666 3.8E-76 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M634_19785 ba3879c5ccd4a35b1e973a0cea06172e 674 Gene3D G3DSA:2.40.30.10 268 389 5.5E-26 T 12-10-2018 M634_19785 ba3879c5ccd4a35b1e973a0cea06172e 674 Gene3D G3DSA:3.40.50.300 1 264 1.0E-52 T 12-10-2018 M634_19785 ba3879c5ccd4a35b1e973a0cea06172e 674 SUPERFAMILY SSF50447 243 370 1.34E-21 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily M634_19785 ba3879c5ccd4a35b1e973a0cea06172e 674 SMART SM00838 578 666 3.1E-21 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like M634_19785 ba3879c5ccd4a35b1e973a0cea06172e 674 SUPERFAMILY SSF54980 381 457 3.27E-16 T 12-10-2018 IPR035647 EF-G domain III/V-like M634_19785 ba3879c5ccd4a35b1e973a0cea06172e 674 SMART SM00889 458 576 3.1E-53 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 M634_19785 ba3879c5ccd4a35b1e973a0cea06172e 674 Gene3D G3DSA:3.30.70.870 390 459 9.8E-17 T 12-10-2018 M634_19785 ba3879c5ccd4a35b1e973a0cea06172e 674 Pfam PF00679 Elongation factor G C-terminus 579 665 1.0E-24 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like M634_19785 ba3879c5ccd4a35b1e973a0cea06172e 674 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 141 6.7E-13 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 M634_19785 ba3879c5ccd4a35b1e973a0cea06172e 674 Gene3D G3DSA:3.30.70.240 582 653 3.8E-76 T 12-10-2018 M634_19785 ba3879c5ccd4a35b1e973a0cea06172e 674 SUPERFAMILY SSF54980 579 669 1.29E-20 T 12-10-2018 IPR035647 EF-G domain III/V-like M634_15365 c58d511169e8e6a9d23db76fbfc2dcfb 202 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 12 194 1.6E-43 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase M634_15365 c58d511169e8e6a9d23db76fbfc2dcfb 202 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 11 194 3.4E-52 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase M634_15365 c58d511169e8e6a9d23db76fbfc2dcfb 202 PIRSF PIRSF006806 7 197 3.3E-36 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase M634_15365 c58d511169e8e6a9d23db76fbfc2dcfb 202 Gene3D G3DSA:3.40.50.10420 2 201 3.5E-57 T 12-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily M634_15365 c58d511169e8e6a9d23db76fbfc2dcfb 202 SUPERFAMILY SSF100950 10 200 2.37E-57 T 12-10-2018 IPR037171 NagB/RpiA transferase-like M634_12970 159f7a7c412671e303d7ae823fd6252f 331 Gene3D G3DSA:3.30.360.10 149 314 7.6E-156 T 12-10-2018 M634_12970 159f7a7c412671e303d7ae823fd6252f 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 3.5E-70 T 12-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_12970 159f7a7c412671e303d7ae823fd6252f 331 SMART SM00846 3 150 2.3E-97 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_12970 159f7a7c412671e303d7ae823fd6252f 331 Gene3D G3DSA:3.40.50.720 4 326 7.6E-156 T 12-10-2018 M634_12970 159f7a7c412671e303d7ae823fd6252f 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 7.7E-47 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_12970 159f7a7c412671e303d7ae823fd6252f 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 7.7E-47 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_12970 159f7a7c412671e303d7ae823fd6252f 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 7.7E-47 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_12970 159f7a7c412671e303d7ae823fd6252f 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 7.7E-47 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_12970 159f7a7c412671e303d7ae823fd6252f 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 7.7E-47 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_12970 159f7a7c412671e303d7ae823fd6252f 331 SUPERFAMILY SSF51735 3 166 2.5E-68 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_12970 159f7a7c412671e303d7ae823fd6252f 331 PIRSF PIRSF000149 1 331 1.1E-135 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_12970 159f7a7c412671e303d7ae823fd6252f 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 3.0E-40 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_12970 159f7a7c412671e303d7ae823fd6252f 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 12-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_12970 159f7a7c412671e303d7ae823fd6252f 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 7.6E-138 T 12-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_12970 159f7a7c412671e303d7ae823fd6252f 331 SUPERFAMILY SSF55347 149 312 3.43E-78 T 12-10-2018 M634_14430 a60088288673e7af89e085e8e0e50b8d 313 Gene3D G3DSA:1.20.81.30 157 278 1.4E-6 T 12-10-2018 M634_14430 a60088288673e7af89e085e8e0e50b8d 313 Pfam PF00482 Type II secretion system (T2SS), protein F 172 299 2.6E-23 T 12-10-2018 IPR018076 Type II secretion system F domain M634_03190 d87e4b2d41e528c739bdc057201c5dc7 449 SMART SM01027 244 374 1.1E-55 T 12-10-2018 IPR022712 Beta-Casp domain M634_03190 d87e4b2d41e528c739bdc057201c5dc7 449 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 388 449 6.3E-15 T 12-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain M634_03190 d87e4b2d41e528c739bdc057201c5dc7 449 SUPERFAMILY SSF56281 6 444 8.65E-122 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M634_03190 d87e4b2d41e528c739bdc057201c5dc7 449 SMART SM00849 21 226 8.3E-20 T 12-10-2018 IPR001279 Metallo-beta-lactamase M634_03190 d87e4b2d41e528c739bdc057201c5dc7 449 Gene3D G3DSA:3.40.50.10890 212 400 3.8E-136 T 12-10-2018 M634_03190 d87e4b2d41e528c739bdc057201c5dc7 449 Gene3D G3DSA:3.60.15.10 14 435 3.8E-136 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M634_03190 d87e4b2d41e528c739bdc057201c5dc7 449 Pfam PF10996 Beta-Casp domain 244 374 8.9E-29 T 12-10-2018 IPR022712 Beta-Casp domain M634_03190 d87e4b2d41e528c739bdc057201c5dc7 449 Pfam PF00753 Metallo-beta-lactamase superfamily 27 116 1.4E-11 T 12-10-2018 IPR001279 Metallo-beta-lactamase M634_09175 b6134f7d23d6deda7a956a3f6d0d027e 162 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 49 68 5.2E-34 T 12-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD M634_09175 b6134f7d23d6deda7a956a3f6d0d027e 162 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 24 47 5.2E-34 T 12-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD M634_09175 b6134f7d23d6deda7a956a3f6d0d027e 162 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 105 127 5.2E-34 T 12-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD M634_09175 b6134f7d23d6deda7a956a3f6d0d027e 162 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 73 95 5.2E-34 T 12-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD M634_09175 b6134f7d23d6deda7a956a3f6d0d027e 162 PIRSF PIRSF003165 1 162 9.9E-59 T 12-10-2018 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup M634_09175 b6134f7d23d6deda7a956a3f6d0d027e 162 Pfam PF07720 Tetratricopeptide repeat 39 70 3.0E-7 T 12-10-2018 IPR011716 Tetratricopeptide TPR-3 M634_09175 b6134f7d23d6deda7a956a3f6d0d027e 162 Pfam PF07720 Tetratricopeptide repeat 77 98 0.11 T 12-10-2018 IPR011716 Tetratricopeptide TPR-3 M634_09175 b6134f7d23d6deda7a956a3f6d0d027e 162 TIGRFAM TIGR02552 LcrH_SycD: type III secretion low calcium response chaperone LcrH/SycD 21 155 4.4E-44 T 12-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD M634_09175 b6134f7d23d6deda7a956a3f6d0d027e 162 Gene3D G3DSA:1.25.40.10 14 162 8.3E-53 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_09175 b6134f7d23d6deda7a956a3f6d0d027e 162 SUPERFAMILY SSF48452 27 148 5.69E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_05200 fda0642af88d3a4ffbe625396fed3ae1 184 Pfam PF12019 Type II transport protein GspH 55 161 6.5E-9 T 12-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 M634_05200 fda0642af88d3a4ffbe625396fed3ae1 184 PIRSF PIRSF024622 1 184 1.9E-75 T 12-10-2018 IPR016824 Tfp pilus assembly protein FimT M634_05200 fda0642af88d3a4ffbe625396fed3ae1 184 SUPERFAMILY SSF54523 19 107 2.04E-15 T 12-10-2018 M634_05200 fda0642af88d3a4ffbe625396fed3ae1 184 Gene3D G3DSA:3.30.700.10 19 184 3.5E-11 T 12-10-2018 M634_05200 fda0642af88d3a4ffbe625396fed3ae1 184 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 17 39 3.7E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M634_05200 fda0642af88d3a4ffbe625396fed3ae1 184 Pfam PF07963 Prokaryotic N-terminal methylation motif 16 38 8.9E-7 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M634_05200 fda0642af88d3a4ffbe625396fed3ae1 184 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 17 37 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M634_19835 5e3f9f8e58806353e992069ef136be1a 195 Pfam PF13649 Methyltransferase domain 36 126 1.7E-8 T 12-10-2018 M634_19835 5e3f9f8e58806353e992069ef136be1a 195 Gene3D G3DSA:3.40.50.150 6 194 4.4E-19 T 12-10-2018 M634_19835 5e3f9f8e58806353e992069ef136be1a 195 SUPERFAMILY SSF53335 5 186 1.76E-20 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_02065 bd37aa3f2fba548b863f06a3a598dc80 315 SUPERFAMILY SSF53328 5 210 1.96E-67 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 M634_02065 bd37aa3f2fba548b863f06a3a598dc80 315 Pfam PF00551 Formyl transferase 6 182 1.7E-47 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 M634_02065 bd37aa3f2fba548b863f06a3a598dc80 315 SUPERFAMILY SSF50486 208 310 4.32E-33 T 12-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 M634_02065 bd37aa3f2fba548b863f06a3a598dc80 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 306 36.98 T 12-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 M634_02065 bd37aa3f2fba548b863f06a3a598dc80 315 Gene3D G3DSA:3.40.50.170 1 209 9.4E-88 T 12-10-2018 M634_02065 bd37aa3f2fba548b863f06a3a598dc80 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 310 6.5E-109 T 12-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 M634_02065 bd37aa3f2fba548b863f06a3a598dc80 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 12-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 M634_02065 bd37aa3f2fba548b863f06a3a598dc80 315 Gene3D G3DSA:3.10.25.10 210 314 3.2E-37 T 12-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 M634_02065 bd37aa3f2fba548b863f06a3a598dc80 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 303 2.9E-29 T 12-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 M634_06225 881f8546a1215b3d7473f0cee20afff1 130 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 86 99 - T 12-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M634_06225 881f8546a1215b3d7473f0cee20afff1 130 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 11 35 - T 12-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M634_06225 881f8546a1215b3d7473f0cee20afff1 130 Gene3D G3DSA:1.20.1300.10 5 130 1.5E-43 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M634_06225 881f8546a1215b3d7473f0cee20afff1 130 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 9 127 2.0E-39 T 12-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M634_06225 881f8546a1215b3d7473f0cee20afff1 130 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 8 124 2.5E-28 T 12-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M634_06225 881f8546a1215b3d7473f0cee20afff1 130 SUPERFAMILY SSF81343 8 130 4.41E-34 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M634_06225 881f8546a1215b3d7473f0cee20afff1 130 PIRSF PIRSF000178 2 130 1.4E-32 T 12-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M634_04870 03c277817dbfb7402df89be03fb336cd 168 Pfam PF02082 Transcriptional regulator 1 83 9.6E-28 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type M634_04870 03c277817dbfb7402df89be03fb336cd 168 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 1 168 51.688 T 12-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 M634_04870 03c277817dbfb7402df89be03fb336cd 168 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 4.2E-66 T 12-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 M634_04870 03c277817dbfb7402df89be03fb336cd 168 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 12-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site M634_04870 03c277817dbfb7402df89be03fb336cd 168 Gene3D G3DSA:1.10.10.10 1 144 2.1E-54 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_04870 03c277817dbfb7402df89be03fb336cd 168 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 3.2E-47 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type M634_04870 03c277817dbfb7402df89be03fb336cd 168 SUPERFAMILY SSF46785 2 133 1.61E-35 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_12575 07a516a1bae52713f3b5955e40101879 322 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 12-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 M634_12575 07a516a1bae52713f3b5955e40101879 322 Pfam PF01207 Dihydrouridine synthase (Dus) 5 296 3.8E-78 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 M634_12575 07a516a1bae52713f3b5955e40101879 322 Gene3D G3DSA:1.20.225.30 243 314 2.5E-25 T 12-10-2018 M634_12575 07a516a1bae52713f3b5955e40101879 322 Gene3D G3DSA:3.20.20.70 1 242 1.4E-80 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_12575 07a516a1bae52713f3b5955e40101879 322 PIRSF PIRSF006621 1 322 8.9E-76 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 M634_12575 07a516a1bae52713f3b5955e40101879 322 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 53.029 T 12-10-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 M634_12575 07a516a1bae52713f3b5955e40101879 322 SUPERFAMILY SSF51395 1 313 2.01E-73 T 12-10-2018 M634_10675 06a646a7e9a866792df10fc621e953b1 71 Pfam PF06042 Nucleotidyltransferase 20 65 1.7E-16 T 12-10-2018 IPR009267 Putative nucleotidyltransferase M634_19890 9fa704dec025561d036a7453f6a3a58f 339 SUPERFAMILY SSF52540 4 240 4.72E-87 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_19890 9fa704dec025561d036a7453f6a3a58f 339 SMART SM00382 28 211 1.8E-20 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_19890 9fa704dec025561d036a7453f6a3a58f 339 Pfam PF00005 ABC transporter 20 161 1.5E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_19890 9fa704dec025561d036a7453f6a3a58f 339 Pfam PF08402 TOBE domain 257 330 3.0E-5 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 M634_19890 9fa704dec025561d036a7453f6a3a58f 339 Gene3D G3DSA:3.40.50.300 1 237 4.6E-80 T 12-10-2018 M634_19890 9fa704dec025561d036a7453f6a3a58f 339 SUPERFAMILY SSF50331 250 334 1.25E-5 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal M634_19890 9fa704dec025561d036a7453f6a3a58f 339 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_22035 1603eb162d3419c367d62db7c4a5d20d 376 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 12-10-2018 IPR002178 PTS EIIA type-2 domain M634_22035 1603eb162d3419c367d62db7c4a5d20d 376 Gene3D G3DSA:3.40.930.10 1 142 2.2E-40 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 M634_22035 1603eb162d3419c367d62db7c4a5d20d 376 Gene3D G3DSA:3.40.930.10 146 277 5.8E-6 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 M634_22035 1603eb162d3419c367d62db7c4a5d20d 376 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 327 342 - T 12-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site M634_22035 1603eb162d3419c367d62db7c4a5d20d 376 Gene3D G3DSA:3.30.1340.10 289 374 2.7E-27 T 12-10-2018 IPR035895 HPr-like superfamily M634_22035 1603eb162d3419c367d62db7c4a5d20d 376 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 290 369 6.2E-23 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like M634_22035 1603eb162d3419c367d62db7c4a5d20d 376 SUPERFAMILY SSF55594 291 375 7.07E-24 T 12-10-2018 IPR035895 HPr-like superfamily M634_22035 1603eb162d3419c367d62db7c4a5d20d 376 SUPERFAMILY SSF55804 145 276 9.03E-19 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 M634_22035 1603eb162d3419c367d62db7c4a5d20d 376 PRINTS PR00107 Phosphocarrier protein signature 298 314 5.3E-19 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like M634_22035 1603eb162d3419c367d62db7c4a5d20d 376 PRINTS PR00107 Phosphocarrier protein signature 326 341 5.3E-19 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like M634_22035 1603eb162d3419c367d62db7c4a5d20d 376 PRINTS PR00107 Phosphocarrier protein signature 341 358 5.3E-19 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like M634_22035 1603eb162d3419c367d62db7c4a5d20d 376 SUPERFAMILY SSF55804 4 140 9.55E-39 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 M634_22035 1603eb162d3419c367d62db7c4a5d20d 376 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 298 305 - T 12-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site M634_22035 1603eb162d3419c367d62db7c4a5d20d 376 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 4 139 6.7E-34 T 12-10-2018 IPR002178 PTS EIIA type-2 domain M634_22035 1603eb162d3419c367d62db7c4a5d20d 376 Pfam PF00381 PTS HPr component phosphorylation site 291 369 1.9E-25 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like M634_21740 62cef79f31d1a80adfb13c893eb2675d 190 Pfam PF13302 Acetyltransferase (GNAT) domain 24 163 2.2E-11 T 12-10-2018 IPR000182 GNAT domain M634_21740 62cef79f31d1a80adfb13c893eb2675d 190 SUPERFAMILY SSF55729 22 165 1.23E-24 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_21740 62cef79f31d1a80adfb13c893eb2675d 190 Gene3D G3DSA:3.40.630.30 7 178 5.2E-27 T 12-10-2018 M634_02675 ff4e27b5594a46ee5ce40fcaeb3ab0de 405 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 402 1.5E-153 T 12-10-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 M634_02675 ff4e27b5594a46ee5ce40fcaeb3ab0de 405 Gene3D G3DSA:1.20.81.30 55 172 1.0E-37 T 12-10-2018 M634_02675 ff4e27b5594a46ee5ce40fcaeb3ab0de 405 Gene3D G3DSA:1.20.81.30 256 368 1.8E-25 T 12-10-2018 M634_02675 ff4e27b5594a46ee5ce40fcaeb3ab0de 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 368 382 7.3E-37 T 12-10-2018 IPR003004 GspF/PilC family M634_02675 ff4e27b5594a46ee5ce40fcaeb3ab0de 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 384 403 7.3E-37 T 12-10-2018 IPR003004 GspF/PilC family M634_02675 ff4e27b5594a46ee5ce40fcaeb3ab0de 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 165 193 7.3E-37 T 12-10-2018 IPR003004 GspF/PilC family M634_02675 ff4e27b5594a46ee5ce40fcaeb3ab0de 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 66 78 7.3E-37 T 12-10-2018 IPR003004 GspF/PilC family M634_02675 ff4e27b5594a46ee5ce40fcaeb3ab0de 405 Pfam PF00482 Type II secretion system (T2SS), protein F 273 395 1.8E-24 T 12-10-2018 IPR018076 Type II secretion system F domain M634_02675 ff4e27b5594a46ee5ce40fcaeb3ab0de 405 Pfam PF00482 Type II secretion system (T2SS), protein F 71 193 1.1E-34 T 12-10-2018 IPR018076 Type II secretion system F domain M634_02675 ff4e27b5594a46ee5ce40fcaeb3ab0de 405 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 165 193 - T 12-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 M634_19915 6de86e6669efb14d3826334dfe28e1da 242 Pfam PF07702 UTRA domain 97 234 7.5E-33 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 M634_19915 6de86e6669efb14d3826334dfe28e1da 242 Gene3D G3DSA:3.40.1410.10 85 240 5.2E-31 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily M634_19915 6de86e6669efb14d3826334dfe28e1da 242 SUPERFAMILY SSF46785 16 79 9.09E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_19915 6de86e6669efb14d3826334dfe28e1da 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 75 6.3E-18 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_19915 6de86e6669efb14d3826334dfe28e1da 242 SUPERFAMILY SSF64288 63 238 8.01E-38 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily M634_19915 6de86e6669efb14d3826334dfe28e1da 242 SMART SM00345 16 75 3.3E-16 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_19915 6de86e6669efb14d3826334dfe28e1da 242 SMART SM00866 96 235 3.3E-21 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 M634_19915 6de86e6669efb14d3826334dfe28e1da 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 2.5E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_19915 6de86e6669efb14d3826334dfe28e1da 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 2.5E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_19915 6de86e6669efb14d3826334dfe28e1da 242 Gene3D G3DSA:1.10.10.10 13 80 2.2E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_09580 c34960897422816e543487de14af2afe 477 SUPERFAMILY SSF81442 13 467 4.06E-122 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_09580 c34960897422816e543487de14af2afe 477 Gene3D G3DSA:1.20.210.10 6 473 2.6E-205 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_09580 c34960897422816e543487de14af2afe 477 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 11 468 1.6E-230 T 12-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 M634_09580 c34960897422816e543487de14af2afe 477 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 17 447 1.6E-115 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_09580 c34960897422816e543487de14af2afe 477 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 207 262 - T 12-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_16455 fb4e292301e1c22eb9ad406ca7851558 161 Gene3D G3DSA:3.10.129.10 2 161 1.4E-43 T 12-10-2018 M634_16455 fb4e292301e1c22eb9ad406ca7851558 161 Pfam PF03061 Thioesterase superfamily 22 97 8.7E-17 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 M634_16455 fb4e292301e1c22eb9ad406ca7851558 161 SUPERFAMILY SSF54637 6 150 5.98E-41 T 12-10-2018 IPR029069 HotDog domain superfamily M634_18645 e50981f1fcefe25804b70a6469a1e98c 378 Gene3D G3DSA:3.40.50.10350 1 362 4.6E-138 T 12-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold M634_18645 e50981f1fcefe25804b70a6469a1e98c 378 Gene3D G3DSA:3.90.1510.10 42 276 4.6E-138 T 12-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 M634_18645 e50981f1fcefe25804b70a6469a1e98c 378 Pfam PF02595 Glycerate kinase family 3 374 6.8E-146 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 M634_18645 e50981f1fcefe25804b70a6469a1e98c 378 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 4.6E-156 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 M634_18645 e50981f1fcefe25804b70a6469a1e98c 378 PIRSF PIRSF006078 1 377 1.1E-131 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 M634_18645 e50981f1fcefe25804b70a6469a1e98c 378 SUPERFAMILY SSF110738 1 376 4.84E-139 T 12-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 M634_04970 e942f9cd7c412fd254eb95809cba616b 488 Pfam PF00571 CBS domain 95 140 5.3E-10 T 12-10-2018 IPR000644 CBS domain M634_04970 e942f9cd7c412fd254eb95809cba616b 488 Pfam PF00571 CBS domain 149 201 8.6E-5 T 12-10-2018 IPR000644 CBS domain M634_04970 e942f9cd7c412fd254eb95809cba616b 488 PIRSF PIRSF000130 1 488 5.5E-202 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 M634_04970 e942f9cd7c412fd254eb95809cba616b 488 SMART SM01240 7 473 0.0 T 12-10-2018 M634_04970 e942f9cd7c412fd254eb95809cba616b 488 Gene3D G3DSA:3.20.20.70 1 486 1.2E-211 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_04970 e942f9cd7c412fd254eb95809cba616b 488 SUPERFAMILY SSF54631 95 203 2.53E-26 T 12-10-2018 M634_04970 e942f9cd7c412fd254eb95809cba616b 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 7.3E-197 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 M634_04970 e942f9cd7c412fd254eb95809cba616b 488 SMART SM00116 158 206 5.6E-6 T 12-10-2018 IPR000644 CBS domain M634_04970 e942f9cd7c412fd254eb95809cba616b 488 SMART SM00116 96 144 1.3E-12 T 12-10-2018 IPR000644 CBS domain M634_04970 e942f9cd7c412fd254eb95809cba616b 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 12-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 M634_04970 e942f9cd7c412fd254eb95809cba616b 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 85.112 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 M634_04970 e942f9cd7c412fd254eb95809cba616b 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 5.6E-162 T 12-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 M634_04970 e942f9cd7c412fd254eb95809cba616b 488 SUPERFAMILY SSF51412 1 477 1.01E-125 T 12-10-2018 M634_15945 4f1edc5a161e29dfc93ebaf3449ae7cd 969 SMART SM00490 519 603 2.7E-17 T 12-10-2018 IPR001650 Helicase, C-terminal M634_15945 4f1edc5a161e29dfc93ebaf3449ae7cd 969 Pfam PF00176 SNF2 family N-terminal domain 174 344 2.1E-15 T 12-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 M634_15945 4f1edc5a161e29dfc93ebaf3449ae7cd 969 Gene3D G3DSA:3.40.50.300 484 627 1.8E-25 T 12-10-2018 M634_15945 4f1edc5a161e29dfc93ebaf3449ae7cd 969 SMART SM00487 150 342 1.3E-15 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M634_15945 4f1edc5a161e29dfc93ebaf3449ae7cd 969 SUPERFAMILY SSF52540 127 378 7.31E-37 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_15945 4f1edc5a161e29dfc93ebaf3449ae7cd 969 Pfam PF12137 RNA polymerase recycling family C-terminal 607 966 9.7E-149 T 12-10-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 M634_15945 4f1edc5a161e29dfc93ebaf3449ae7cd 969 Pfam PF00271 Helicase conserved C-terminal domain 494 603 4.2E-16 T 12-10-2018 IPR001650 Helicase, C-terminal M634_15945 4f1edc5a161e29dfc93ebaf3449ae7cd 969 SUPERFAMILY SSF52540 273 649 1.21E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_15945 4f1edc5a161e29dfc93ebaf3449ae7cd 969 Gene3D G3DSA:3.30.360.80 714 786 3.2E-30 T 12-10-2018 M634_15945 4f1edc5a161e29dfc93ebaf3449ae7cd 969 Gene3D G3DSA:3.40.50.10810 628 713 2.6E-6 T 12-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily M634_15945 4f1edc5a161e29dfc93ebaf3449ae7cd 969 Gene3D G3DSA:3.40.50.10810 150 437 7.9E-106 T 12-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily M634_15945 4f1edc5a161e29dfc93ebaf3449ae7cd 969 Gene3D G3DSA:2.30.30.930 55 114 5.4E-26 T 12-10-2018 M634_15945 4f1edc5a161e29dfc93ebaf3449ae7cd 969 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 967 29.205 T 12-10-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 M634_15945 4f1edc5a161e29dfc93ebaf3449ae7cd 969 Gene3D G3DSA:2.30.30.140 1 53 4.9E-24 T 12-10-2018 M634_14990 e1256cf6a46a0e03d46bdeb666275be4 146 PRINTS PR00813 Bacterial general secretion pathway protein G signature 11 36 5.8E-12 T 12-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 M634_14990 e1256cf6a46a0e03d46bdeb666275be4 146 PRINTS PR00813 Bacterial general secretion pathway protein G signature 47 65 5.8E-12 T 12-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 M634_14990 e1256cf6a46a0e03d46bdeb666275be4 146 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 31 3.6E-11 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M634_14990 e1256cf6a46a0e03d46bdeb666275be4 146 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M634_14990 e1256cf6a46a0e03d46bdeb666275be4 146 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 32 5.0E-10 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M634_14990 e1256cf6a46a0e03d46bdeb666275be4 146 Gene3D G3DSA:3.30.700.10 12 145 1.9E-30 T 12-10-2018 M634_14990 e1256cf6a46a0e03d46bdeb666275be4 146 Pfam PF00114 Pilin (bacterial filament) 41 143 5.3E-11 T 12-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 M634_14990 e1256cf6a46a0e03d46bdeb666275be4 146 SUPERFAMILY SSF54523 12 143 2.41E-26 T 12-10-2018 M634_03385 756d9a7dbdd6c76983597e7873ac5986 37 Pfam PF00444 Ribosomal protein L36 1 37 9.4E-19 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03385 756d9a7dbdd6c76983597e7873ac5986 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.137 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03385 756d9a7dbdd6c76983597e7873ac5986 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03385 756d9a7dbdd6c76983597e7873ac5986 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 4.0E-23 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03385 756d9a7dbdd6c76983597e7873ac5986 37 SUPERFAMILY SSF57840 1 37 1.02E-16 T 12-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03385 756d9a7dbdd6c76983597e7873ac5986 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 3.0E-9 T 12-10-2018 M634_22010 72bb101cdfe359dc9442fbb4431dd4c8 353 Pfam PF13437 HlyD family secretion protein 155 259 5.3E-5 T 12-10-2018 M634_22010 72bb101cdfe359dc9442fbb4431dd4c8 353 Pfam PF13533 Biotin-lipoyl like 58 104 1.6E-8 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain M634_22010 72bb101cdfe359dc9442fbb4431dd4c8 353 Gene3D G3DSA:2.40.30.170 43 269 3.6E-62 T 12-10-2018 M634_22010 72bb101cdfe359dc9442fbb4431dd4c8 353 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 348 3.7E-55 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 M634_22010 72bb101cdfe359dc9442fbb4431dd4c8 353 Gene3D G3DSA:2.40.50.100 57 189 3.6E-62 T 12-10-2018 M634_22010 72bb101cdfe359dc9442fbb4431dd4c8 353 Gene3D G3DSA:2.40.420.20 270 346 3.6E-62 T 12-10-2018 M634_22010 72bb101cdfe359dc9442fbb4431dd4c8 353 SUPERFAMILY SSF111369 48 267 1.44E-25 T 12-10-2018 M634_22010 72bb101cdfe359dc9442fbb4431dd4c8 353 Gene3D G3DSA:1.10.287.470 91 149 3.6E-62 T 12-10-2018 M634_18635 662c1781e4d453155147c9c9c2dba4e7 380 SUPERFAMILY SSF46689 323 352 4.3E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_18635 662c1781e4d453155147c9c9c2dba4e7 380 Pfam PF05651 Putative sugar diacid recognition 4 137 2.5E-51 T 12-10-2018 IPR008599 Putative sugar diacid recognition M634_18635 662c1781e4d453155147c9c9c2dba4e7 380 Pfam PF13556 PucR C-terminal helix-turn-helix domain 318 375 6.4E-21 T 12-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain M634_18635 662c1781e4d453155147c9c9c2dba4e7 380 Gene3D G3DSA:1.10.10.2840 252 380 1.6E-21 T 12-10-2018 M634_02280 ce6750658b3c8bb4cf761c3dea4fbb47 190 TIGRFAM TIGR02999 Sig-70_X6: RNA polymerase sigma factor, TIGR02999 family 6 187 4.8E-57 T 12-10-2018 IPR011517 RNA polymerase sigma-70 ECF-like M634_02280 ce6750658b3c8bb4cf761c3dea4fbb47 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 187 2.3E-17 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 M634_02280 ce6750658b3c8bb4cf761c3dea4fbb47 190 SUPERFAMILY SSF88659 123 187 3.18E-6 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like M634_02280 ce6750658b3c8bb4cf761c3dea4fbb47 190 Pfam PF07638 ECF sigma factor 6 188 1.4E-29 T 12-10-2018 IPR011517 RNA polymerase sigma-70 ECF-like M634_02280 ce6750658b3c8bb4cf761c3dea4fbb47 190 Gene3D G3DSA:1.10.10.10 125 189 4.8E-7 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_02320 ba28bbb5ab8a43ee000a299d782848fe 174 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 7 162 8.7E-64 T 12-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 M634_02320 ba28bbb5ab8a43ee000a299d782848fe 174 SUPERFAMILY SSF52540 4 160 1.24E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_02320 ba28bbb5ab8a43ee000a299d782848fe 174 Gene3D G3DSA:3.40.50.300 2 168 8.7E-64 T 12-10-2018 M634_02320 ba28bbb5ab8a43ee000a299d782848fe 174 Pfam PF01202 Shikimate kinase 13 141 7.8E-14 T 12-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 M634_17840 4d8e02592096b87b7d6783f90d46ceba 498 Gene3D G3DSA:3.40.50.10940 2 176 4.7E-80 T 12-10-2018 IPR038583 L-arabinose isomerase, N-terminal domain superfamily KEGG: 00040+5.3.1.4 M634_17840 4d8e02592096b87b7d6783f90d46ceba 498 SUPERFAMILY SSF50443 330 497 1.07E-66 T 12-10-2018 IPR004216 L-fucose/L-arabinose isomerase, C-terminal M634_17840 4d8e02592096b87b7d6783f90d46ceba 498 PIRSF PIRSF001478 2 498 1.7E-248 T 12-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 M634_17840 4d8e02592096b87b7d6783f90d46ceba 498 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 2 305 1.0E-179 T 12-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 M634_17840 4d8e02592096b87b7d6783f90d46ceba 498 SUPERFAMILY SSF53743 2 328 2.3E-120 T 12-10-2018 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily GO:0005737|GO:0005996|GO:0016861 M634_17840 4d8e02592096b87b7d6783f90d46ceba 498 Pfam PF11762 L-arabinose isomerase C-terminal domain 362 475 8.9E-46 T 12-10-2018 IPR024664 L-arabinose isomerase, C-terminal KEGG: 00040+5.3.1.4 M634_17840 4d8e02592096b87b7d6783f90d46ceba 498 Hamap MF_00519 L-arabinose isomerase [araA]. 2 476 63.012 T 12-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 M634_17840 4d8e02592096b87b7d6783f90d46ceba 498 Pfam PF02610 L-arabinose isomerase 6 359 3.6E-170 T 12-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 M634_04270 14ca74916d662791091ee2e2749f08aa 269 SUPERFAMILY SSF53850 73 263 4.71E-17 T 12-10-2018 M634_04270 14ca74916d662791091ee2e2749f08aa 269 Pfam PF03466 LysR substrate binding domain 74 259 4.7E-15 T 12-10-2018 IPR005119 LysR, substrate-binding M634_04270 14ca74916d662791091ee2e2749f08aa 269 Gene3D G3DSA:3.40.190.290 100 258 2.0E-8 T 12-10-2018 M634_04270 14ca74916d662791091ee2e2749f08aa 269 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 43 3.8E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_04270 14ca74916d662791091ee2e2749f08aa 269 SUPERFAMILY SSF46785 2 66 1.32E-9 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_04270 14ca74916d662791091ee2e2749f08aa 269 Gene3D G3DSA:1.10.10.10 1 73 6.8E-11 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_04875 9979304ccab485250b52c39c53dbbd93 404 Gene3D G3DSA:3.90.1150.10 5 375 1.2E-169 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M634_04875 9979304ccab485250b52c39c53dbbd93 404 Gene3D G3DSA:3.40.640.10 16 262 1.2E-169 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_04875 9979304ccab485250b52c39c53dbbd93 404 SUPERFAMILY SSF53383 5 391 3.32E-116 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_04875 9979304ccab485250b52c39c53dbbd93 404 PIRSF PIRSF005572 2 384 3.4E-138 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 M634_04875 9979304ccab485250b52c39c53dbbd93 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 1.2E-230 T 12-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 M634_04875 9979304ccab485250b52c39c53dbbd93 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site M634_04875 9979304ccab485250b52c39c53dbbd93 404 Pfam PF00266 Aminotransferase class-V 5 368 5.2E-90 T 12-10-2018 IPR000192 Aminotransferase class V domain M634_04875 9979304ccab485250b52c39c53dbbd93 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 54.697 T 12-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 M634_11855 6ce9ba96960914747ee1226438a75fad 475 PIRSF PIRSF000243 24 474 8.9E-123 T 12-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 M634_11855 6ce9ba96960914747ee1226438a75fad 475 Pfam PF02335 Cytochrome c552 41 470 1.6E-178 T 12-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 M634_11855 6ce9ba96960914747ee1226438a75fad 475 SUPERFAMILY SSF48695 36 470 3.11E-163 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily M634_11855 6ce9ba96960914747ee1226438a75fad 475 Gene3D G3DSA:1.20.140.10 309 451 7.9E-186 T 12-10-2018 M634_11855 6ce9ba96960914747ee1226438a75fad 475 Gene3D G3DSA:1.10.1130.10 40 469 7.9E-186 T 12-10-2018 M634_11855 6ce9ba96960914747ee1226438a75fad 475 Hamap MF_01182 Cytochrome c-552 [nrfA]. 3 475 57.922 T 12-10-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 M634_11855 6ce9ba96960914747ee1226438a75fad 475 TIGRFAM TIGR03152 cyto_c552_HCOOH: formate-dependent cytochrome c nitrite reductase, c552 subunit 37 473 4.1E-245 T 12-10-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 M634_05470 2c274016f9751dee5e5fce1e3db40c20 561 Gene3D G3DSA:3.20.20.80 176 480 6.9E-116 T 12-10-2018 M634_05470 2c274016f9751dee5e5fce1e3db40c20 561 SUPERFAMILY SSF51445 9 477 4.77E-164 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M634_05470 2c274016f9751dee5e5fce1e3db40c20 561 Gene3D G3DSA:2.60.40.1180 481 559 7.6E-18 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta M634_05470 2c274016f9751dee5e5fce1e3db40c20 561 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 10 557 5.0E-268 T 12-10-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 M634_05470 2c274016f9751dee5e5fce1e3db40c20 561 SUPERFAMILY SSF51011 480 559 5.04E-16 T 12-10-2018 M634_05470 2c274016f9751dee5e5fce1e3db40c20 561 SMART SM00642 18 419 2.0E-163 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 M634_05470 2c274016f9751dee5e5fce1e3db40c20 561 Gene3D G3DSA:3.90.400.10 112 175 2.1E-30 T 12-10-2018 M634_05470 2c274016f9751dee5e5fce1e3db40c20 561 Gene3D G3DSA:3.20.20.80 1 111 2.2E-51 T 12-10-2018 M634_05470 2c274016f9751dee5e5fce1e3db40c20 561 Pfam PF16657 Maltogenic Amylase, C-terminal domain 480 554 6.5E-9 T 12-10-2018 IPR032091 Maltogenic Amylase, C-terminal M634_05470 2c274016f9751dee5e5fce1e3db40c20 561 Pfam PF00128 Alpha amylase, catalytic domain 33 376 7.5E-128 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 M634_13730 f6e2957459d3de9a059fe0b8f74d29c1 95 Gene3D G3DSA:1.10.10.10 2 95 1.4E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_13730 f6e2957459d3de9a059fe0b8f74d29c1 95 Pfam PF09904 Winged helix-turn helix 4 91 1.1E-37 T 12-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 M634_13730 f6e2957459d3de9a059fe0b8f74d29c1 95 PIRSF PIRSF037266 1 94 5.6E-41 T 12-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 M634_22405 8ecfae3f820788d24c42cb1f8e4c1673 329 Gene3D G3DSA:3.40.50.20 18 325 5.4E-81 T 12-10-2018 M634_22405 8ecfae3f820788d24c42cb1f8e4c1673 329 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 82 93 - T 12-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 M634_22405 8ecfae3f820788d24c42cb1f8e4c1673 329 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 328 4.9E-99 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 M634_22405 8ecfae3f820788d24c42cb1f8e4c1673 329 SUPERFAMILY SSF56059 115 326 1.28E-43 T 12-10-2018 M634_22405 8ecfae3f820788d24c42cb1f8e4c1673 329 Gene3D G3DSA:3.30.470.20 104 319 5.4E-81 T 12-10-2018 M634_22405 8ecfae3f820788d24c42cb1f8e4c1673 329 Pfam PF07478 D-ala D-ala ligase C-terminus 125 325 1.1E-53 T 12-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 M634_22405 8ecfae3f820788d24c42cb1f8e4c1673 329 Gene3D G3DSA:3.30.1490.20 131 198 5.4E-81 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 M634_22405 8ecfae3f820788d24c42cb1f8e4c1673 329 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 329 32.798 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 M634_22405 8ecfae3f820788d24c42cb1f8e4c1673 329 PIRSF PIRSF039102 1 329 1.2E-77 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 M634_22405 8ecfae3f820788d24c42cb1f8e4c1673 329 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 271 299 - T 12-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 M634_22405 8ecfae3f820788d24c42cb1f8e4c1673 329 Pfam PF01820 D-ala D-ala ligase N-terminus 4 105 3.4E-20 T 12-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 M634_22405 8ecfae3f820788d24c42cb1f8e4c1673 329 SUPERFAMILY SSF52440 3 114 6.91E-27 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily M634_00905 5bf036cdc90c94c5a62a78745cf33521 149 PIRSF PIRSF001399 3 149 6.5E-60 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 M634_00905 5bf036cdc90c94c5a62a78745cf33521 149 Gene3D G3DSA:3.40.50.9100 1 149 4.6E-67 T 12-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 M634_00905 5bf036cdc90c94c5a62a78745cf33521 149 Pfam PF01220 Dehydroquinase class II 6 142 3.6E-62 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 M634_00905 5bf036cdc90c94c5a62a78745cf33521 149 SUPERFAMILY SSF52304 4 145 3.4E-62 T 12-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 M634_00905 5bf036cdc90c94c5a62a78745cf33521 149 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 149 74.97 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 M634_00905 5bf036cdc90c94c5a62a78745cf33521 149 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 145 1.9E-64 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 M634_00905 5bf036cdc90c94c5a62a78745cf33521 149 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 12-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 M634_00905 5bf036cdc90c94c5a62a78745cf33521 149 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 21 149 5.0E-70 T 12-10-2018 M634_06935 4b2ea03db4144b1a5028c7d9a7628cc1 251 Pfam PF02348 Cytidylyltransferase 5 221 1.8E-65 T 12-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 M634_06935 4b2ea03db4144b1a5028c7d9a7628cc1 251 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 2.2E-117 T 12-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 M634_06935 4b2ea03db4144b1a5028c7d9a7628cc1 251 Gene3D G3DSA:3.90.550.10 1 251 6.3E-98 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M634_06935 4b2ea03db4144b1a5028c7d9a7628cc1 251 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 46.801 T 12-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 M634_06935 4b2ea03db4144b1a5028c7d9a7628cc1 251 SUPERFAMILY SSF53448 3 246 3.6E-64 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M634_20075 ffaa0d44671002a8ee4a89af8de103d6 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 17 28 1.2E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_20075 ffaa0d44671002a8ee4a89af8de103d6 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 38 1.2E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_20075 ffaa0d44671002a8ee4a89af8de103d6 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 49 1.2E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_20075 ffaa0d44671002a8ee4a89af8de103d6 303 Gene3D G3DSA:3.40.190.10 166 272 2.3E-9 T 12-10-2018 M634_20075 ffaa0d44671002a8ee4a89af8de103d6 303 SUPERFAMILY SSF53850 90 284 3.08E-18 T 12-10-2018 M634_20075 ffaa0d44671002a8ee4a89af8de103d6 303 SUPERFAMILY SSF46785 5 109 2.11E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_20075 ffaa0d44671002a8ee4a89af8de103d6 303 Pfam PF03466 LysR substrate binding domain 89 293 2.8E-8 T 12-10-2018 IPR005119 LysR, substrate-binding M634_20075 ffaa0d44671002a8ee4a89af8de103d6 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 6.9E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_20075 ffaa0d44671002a8ee4a89af8de103d6 303 Gene3D G3DSA:3.40.190.10 94 283 2.3E-9 T 12-10-2018 M634_20075 ffaa0d44671002a8ee4a89af8de103d6 303 Gene3D G3DSA:1.10.10.10 3 87 1.8E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_07055 c0ec650bc80a58affdf6e09513a5ef22 741 PIRSF PIRSF009407 1 741 0.0 T 12-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 M634_07055 c0ec650bc80a58affdf6e09513a5ef22 741 SUPERFAMILY SSF53659 5 740 0.0 T 12-10-2018 M634_07055 c0ec650bc80a58affdf6e09513a5ef22 741 Gene3D G3DSA:3.40.718.10 414 650 3.3E-8 T 12-10-2018 M634_07055 c0ec650bc80a58affdf6e09513a5ef22 741 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 740 0.0 T 12-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 M634_07055 c0ec650bc80a58affdf6e09513a5ef22 741 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 740 0.0 T 12-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 M634_04750 2b4a7ed319b95708bc48bfbb61a89ed1 229 Pfam PF00072 Response regulator receiver domain 5 116 1.2E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_04750 2b4a7ed319b95708bc48bfbb61a89ed1 229 SMART SM00448 3 116 1.9E-45 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_04750 2b4a7ed319b95708bc48bfbb61a89ed1 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 3.9E-28 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_04750 2b4a7ed319b95708bc48bfbb61a89ed1 229 SMART SM00862 150 225 1.3E-27 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_04750 2b4a7ed319b95708bc48bfbb61a89ed1 229 Gene3D G3DSA:3.40.50.2300 1 126 9.5E-39 T 12-10-2018 M634_04750 2b4a7ed319b95708bc48bfbb61a89ed1 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 4.9E-113 T 12-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 M634_04750 2b4a7ed319b95708bc48bfbb61a89ed1 229 Gene3D G3DSA:1.10.10.10 127 228 3.1E-40 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_04750 2b4a7ed319b95708bc48bfbb61a89ed1 229 SUPERFAMILY SSF52172 3 183 4.83E-43 T 12-10-2018 IPR011006 CheY-like superfamily M634_20280 b65bbf69b9d85a0805e6fa277ee66e84 237 SMART SM00862 154 230 6.0E-18 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_20280 b65bbf69b9d85a0805e6fa277ee66e84 237 SMART SM00448 8 118 2.0E-37 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_20280 b65bbf69b9d85a0805e6fa277ee66e84 237 SUPERFAMILY SSF52172 8 130 1.39E-36 T 12-10-2018 IPR011006 CheY-like superfamily M634_20280 b65bbf69b9d85a0805e6fa277ee66e84 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 230 5.3E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_20280 b65bbf69b9d85a0805e6fa277ee66e84 237 Pfam PF00072 Response regulator receiver domain 11 119 1.0E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_20280 b65bbf69b9d85a0805e6fa277ee66e84 237 Gene3D G3DSA:1.10.10.10 125 237 2.4E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_20280 b65bbf69b9d85a0805e6fa277ee66e84 237 Gene3D G3DSA:3.40.50.2300 1 124 3.2E-33 T 12-10-2018 M634_20280 b65bbf69b9d85a0805e6fa277ee66e84 237 SUPERFAMILY SSF46894 136 232 4.82E-24 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M634_07840 408ee127bd4be561fbbf0fae3115e7a6 535 Pfam PF00672 HAMP domain 205 252 1.1E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_07840 408ee127bd4be561fbbf0fae3115e7a6 535 Gene3D G3DSA:1.10.287.950 203 535 4.2E-73 T 12-10-2018 M634_07840 408ee127bd4be561fbbf0fae3115e7a6 535 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 399 428 5.9E-5 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M634_07840 408ee127bd4be561fbbf0fae3115e7a6 535 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 300 329 5.9E-5 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M634_07840 408ee127bd4be561fbbf0fae3115e7a6 535 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 318 500 4.2E-44 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_07840 408ee127bd4be561fbbf0fae3115e7a6 535 SMART SM00283 272 533 5.0E-73 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_07840 408ee127bd4be561fbbf0fae3115e7a6 535 SMART SM00304 204 257 3.8E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_07840 408ee127bd4be561fbbf0fae3115e7a6 535 SUPERFAMILY SSF58104 230 534 2.09E-72 T 12-10-2018 M634_19995 d2508142aac7418bba5cf647521e4c00 795 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 699 717 - T 12-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 M634_19995 d2508142aac7418bba5cf647521e4c00 795 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 419 430 - T 12-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 M634_19995 d2508142aac7418bba5cf647521e4c00 795 SUPERFAMILY SSF51621 467 793 6.85E-98 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 M634_19995 d2508142aac7418bba5cf647521e4c00 795 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 23 350 2.7E-120 T 12-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 M634_19995 d2508142aac7418bba5cf647521e4c00 795 Gene3D G3DSA:3.30.470.20 199 362 1.1E-58 T 12-10-2018 M634_19995 d2508142aac7418bba5cf647521e4c00 795 Gene3D G3DSA:3.30.1490.20 7 198 3.1E-73 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 M634_19995 d2508142aac7418bba5cf647521e4c00 795 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 12 794 0.0 T 12-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 M634_19995 d2508142aac7418bba5cf647521e4c00 795 Gene3D G3DSA:3.20.20.60 483 793 5.7E-104 T 12-10-2018 M634_19995 d2508142aac7418bba5cf647521e4c00 795 Pfam PF00391 PEP-utilising enzyme, mobile domain 389 460 1.5E-26 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 M634_19995 d2508142aac7418bba5cf647521e4c00 795 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 487 787 5.0E-62 T 12-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 M634_19995 d2508142aac7418bba5cf647521e4c00 795 Gene3D G3DSA:3.50.30.10 363 482 4.9E-41 T 12-10-2018 M634_19995 d2508142aac7418bba5cf647521e4c00 795 SUPERFAMILY SSF56059 6 389 5.89E-109 T 12-10-2018 M634_19995 d2508142aac7418bba5cf647521e4c00 795 PIRSF PIRSF000854 5 795 0.0 T 12-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 M634_19995 d2508142aac7418bba5cf647521e4c00 795 SUPERFAMILY SSF52009 354 472 2.35E-34 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 M634_18120 f2336e2f06656627e71a64958b987dae 704 Pfam PF00005 ABC transporter 487 635 4.5E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_18120 f2336e2f06656627e71a64958b987dae 704 ProSitePatterns PS00211 ABC transporters family signature. 607 621 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_18120 f2336e2f06656627e71a64958b987dae 704 Gene3D G3DSA:3.40.50.300 461 703 1.4E-74 T 12-10-2018 M634_18120 f2336e2f06656627e71a64958b987dae 704 SUPERFAMILY SSF90123 138 452 1.27E-49 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M634_18120 f2336e2f06656627e71a64958b987dae 704 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 3 698 3.0E-294 T 12-10-2018 IPR017750 ATPase, type I secretion system M634_18120 f2336e2f06656627e71a64958b987dae 704 Gene3D G3DSA:3.90.70.10 1 126 9.4E-38 T 12-10-2018 M634_18120 f2336e2f06656627e71a64958b987dae 704 SUPERFAMILY SSF52540 459 693 2.33E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_18120 f2336e2f06656627e71a64958b987dae 704 Pfam PF00664 ABC transporter transmembrane region 158 417 2.5E-20 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 M634_18120 f2336e2f06656627e71a64958b987dae 704 Gene3D G3DSA:1.20.1560.10 141 454 3.6E-56 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M634_18120 f2336e2f06656627e71a64958b987dae 704 SMART SM00382 495 681 2.3E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_10580 f439afb6e1913d88bf46d44e96bb2bfd 346 SUPERFAMILY SSF46689 18 113 1.97E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_10580 f439afb6e1913d88bf46d44e96bb2bfd 346 SUPERFAMILY SSF53098 160 333 3.79E-39 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M634_10580 f439afb6e1913d88bf46d44e96bb2bfd 346 Gene3D G3DSA:3.30.420.10 161 328 1.3E-16 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M634_10580 f439afb6e1913d88bf46d44e96bb2bfd 346 Pfam PF13551 Winged helix-turn helix 11 74 2.2E-20 T 12-10-2018 M634_10580 f439afb6e1913d88bf46d44e96bb2bfd 346 Pfam PF00665 Integrase core domain 161 283 3.2E-21 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M634_12530 e26ac61b601330633cd38dfce0f5a4de 696 Pfam PF05170 AsmA family 1 586 6.2E-116 T 12-10-2018 IPR007844 AsmA M634_17355 c1ac9621b7a861e145c7e66238eb43a3 254 PRINTS PR00410 Phenol hydroxylase reductase family signature 117 136 7.2E-5 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 M634_17355 c1ac9621b7a861e145c7e66238eb43a3 254 PRINTS PR00410 Phenol hydroxylase reductase family signature 142 151 7.2E-5 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 M634_17355 c1ac9621b7a861e145c7e66238eb43a3 254 PRINTS PR00410 Phenol hydroxylase reductase family signature 34 46 7.2E-5 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 M634_17355 c1ac9621b7a861e145c7e66238eb43a3 254 PRINTS PR00410 Phenol hydroxylase reductase family signature 215 223 7.2E-5 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 M634_17355 c1ac9621b7a861e145c7e66238eb43a3 254 SUPERFAMILY SSF63380 10 100 1.7E-18 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel M634_17355 c1ac9621b7a861e145c7e66238eb43a3 254 Pfam PF00970 Oxidoreductase FAD-binding domain 21 95 2.2E-6 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 M634_17355 c1ac9621b7a861e145c7e66238eb43a3 254 Gene3D G3DSA:2.40.30.10 2 102 6.0E-24 T 12-10-2018 M634_17355 c1ac9621b7a861e145c7e66238eb43a3 254 SUPERFAMILY SSF52343 112 253 5.76E-36 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M634_17355 c1ac9621b7a861e145c7e66238eb43a3 254 Pfam PF00175 Oxidoreductase NAD-binding domain 118 228 3.3E-16 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 M634_17355 c1ac9621b7a861e145c7e66238eb43a3 254 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 117 136 9.7E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M634_17355 c1ac9621b7a861e145c7e66238eb43a3 254 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 142 151 9.7E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M634_17355 c1ac9621b7a861e145c7e66238eb43a3 254 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 215 223 9.7E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M634_17355 c1ac9621b7a861e145c7e66238eb43a3 254 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 54 61 9.7E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M634_17355 c1ac9621b7a861e145c7e66238eb43a3 254 Gene3D G3DSA:3.40.50.80 104 254 7.1E-38 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M634_13645 9b99d02f9a20b9badc0e11f6b6e705df 580 PRINTS PR01009 Flagellar M-ring protein signature 181 195 2.1E-22 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 M634_13645 9b99d02f9a20b9badc0e11f6b6e705df 580 PRINTS PR01009 Flagellar M-ring protein signature 224 242 2.1E-22 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 M634_13645 9b99d02f9a20b9badc0e11f6b6e705df 580 PRINTS PR01009 Flagellar M-ring protein signature 149 167 2.1E-22 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 M634_13645 9b99d02f9a20b9badc0e11f6b6e705df 580 PRINTS PR01009 Flagellar M-ring protein signature 374 398 2.1E-22 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 M634_13645 9b99d02f9a20b9badc0e11f6b6e705df 580 PRINTS PR01009 Flagellar M-ring protein signature 294 312 2.1E-22 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 M634_13645 9b99d02f9a20b9badc0e11f6b6e705df 580 PIRSF PIRSF004862 27 580 1.4E-162 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 M634_13645 9b99d02f9a20b9badc0e11f6b6e705df 580 Pfam PF01514 Secretory protein of YscJ/FliF family 62 248 3.2E-54 T 12-10-2018 IPR006182 Secretory protein YscJ/FliF M634_13645 9b99d02f9a20b9badc0e11f6b6e705df 580 Gene3D G3DSA:3.30.300.30 151 246 1.3E-10 T 12-10-2018 M634_13645 9b99d02f9a20b9badc0e11f6b6e705df 580 Pfam PF08345 Flagellar M-ring protein C-terminal 281 451 2.1E-38 T 12-10-2018 IPR013556 Flagellar M-ring C-terminal M634_13645 9b99d02f9a20b9badc0e11f6b6e705df 580 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 53 579 2.5E-72 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 M634_14880 d65274dbb5d909047d6c2d67ca570250 790 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 49 772 0.0 T 12-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M634_14880 d65274dbb5d909047d6c2d67ca570250 790 Pfam PF00905 Penicillin binding protein transpeptidase domain 453 691 1.4E-23 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 M634_14880 d65274dbb5d909047d6c2d67ca570250 790 SUPERFAMILY SSF56601 343 777 7.14E-110 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like M634_14880 d65274dbb5d909047d6c2d67ca570250 790 Gene3D G3DSA:3.30.2060.10 92 181 1.7E-262 T 12-10-2018 M634_14880 d65274dbb5d909047d6c2d67ca570250 790 PIRSF PIRSF002799 14 790 0.0 T 12-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M634_14880 d65274dbb5d909047d6c2d67ca570250 790 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 194 727 2.4E-157 T 12-10-2018 M634_14880 d65274dbb5d909047d6c2d67ca570250 790 Pfam PF14814 Bifunctional transglycosylase second domain 94 178 4.2E-27 T 12-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M634_14880 d65274dbb5d909047d6c2d67ca570250 790 Gene3D G3DSA:1.10.3810.10 182 385 1.7E-262 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M634_14880 d65274dbb5d909047d6c2d67ca570250 790 Pfam PF00912 Transglycosylase 190 360 1.6E-59 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M634_14880 d65274dbb5d909047d6c2d67ca570250 790 Gene3D G3DSA:3.40.710.10 84 741 1.7E-262 T 12-10-2018 M634_14880 d65274dbb5d909047d6c2d67ca570250 790 SUPERFAMILY SSF53955 190 383 5.91E-69 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily M634_17180 fa51614f8dfb397404dd53438271978e 696 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 16 694 2.4E-236 T 12-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 M634_17180 fa51614f8dfb397404dd53438271978e 696 Gene3D G3DSA:3.40.30.60 358 501 2.8E-45 T 12-10-2018 M634_17180 fa51614f8dfb397404dd53438271978e 696 Gene3D G3DSA:1.10.8.540 502 589 7.3E-13 T 12-10-2018 M634_17180 fa51614f8dfb397404dd53438271978e 696 Gene3D G3DSA:1.10.490.80 592 695 2.0E-9 T 12-10-2018 M634_17180 fa51614f8dfb397404dd53438271978e 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 155 173 6.2E-55 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M634_17180 fa51614f8dfb397404dd53438271978e 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 236 250 6.2E-55 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M634_17180 fa51614f8dfb397404dd53438271978e 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 136 152 6.2E-55 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M634_17180 fa51614f8dfb397404dd53438271978e 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 32 45 6.2E-55 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M634_17180 fa51614f8dfb397404dd53438271978e 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 185 202 6.2E-55 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M634_17180 fa51614f8dfb397404dd53438271978e 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 69 88 6.2E-55 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M634_17180 fa51614f8dfb397404dd53438271978e 696 PIRSF PIRSF005419 2 696 3.5E-222 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M634_17180 fa51614f8dfb397404dd53438271978e 696 Pfam PF00771 FHIPEP family 25 687 3.1E-242 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M634_17180 fa51614f8dfb397404dd53438271978e 696 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 141 164 - T 12-10-2018 IPR025505 FHIPEP conserved site M634_15950 0c68b27cc912be1753e8a9be40e748c2 458 Gene3D G3DSA:3.40.50.1010 3 155 9.0E-28 T 12-10-2018 M634_15950 0c68b27cc912be1753e8a9be40e748c2 458 Gene3D G3DSA:3.40.50.300 245 456 1.4E-65 T 12-10-2018 M634_15950 0c68b27cc912be1753e8a9be40e748c2 458 SMART SM00670 7 141 1.8E-10 T 12-10-2018 IPR002716 PIN domain M634_15950 0c68b27cc912be1753e8a9be40e748c2 458 SUPERFAMILY SSF88723 7 160 4.12E-14 T 12-10-2018 IPR029060 PIN-like domain superfamily M634_15950 0c68b27cc912be1753e8a9be40e748c2 458 Pfam PF13638 PIN domain 9 150 5.4E-35 T 12-10-2018 IPR002716 PIN domain M634_15950 0c68b27cc912be1753e8a9be40e748c2 458 Pfam PF02562 PhoH-like protein 248 452 8.4E-54 T 12-10-2018 IPR003714 PhoH-like protein GO:0005524 M634_15950 0c68b27cc912be1753e8a9be40e748c2 458 SUPERFAMILY SSF52540 247 437 1.45E-29 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_15240 9112685dc6fdcceead3f82a419a65655 546 Pfam PF00117 Glutamine amidotransferase class-I 301 535 5.6E-62 T 12-10-2018 IPR017926 Glutamine amidotransferase M634_15240 9112685dc6fdcceead3f82a419a65655 546 Gene3D G3DSA:3.40.50.880 286 543 1.8E-105 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M634_15240 9112685dc6fdcceead3f82a419a65655 546 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.318 T 12-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 M634_15240 9112685dc6fdcceead3f82a419a65655 546 Gene3D G3DSA:3.40.50.300 1 285 2.2E-133 T 12-10-2018 M634_15240 9112685dc6fdcceead3f82a419a65655 546 SUPERFAMILY SSF52540 3 269 2.13E-121 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_15240 9112685dc6fdcceead3f82a419a65655 546 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 6.6E-260 T 12-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 M634_15240 9112685dc6fdcceead3f82a419a65655 546 Pfam PF06418 CTP synthase N-terminus 5 265 1.3E-124 T 12-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 M634_15240 9112685dc6fdcceead3f82a419a65655 546 SUPERFAMILY SSF52317 289 539 2.75E-88 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M634_11745 068fe4b67acc10e8f163c4deacacb60c 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 3.3E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_11745 068fe4b67acc10e8f163c4deacacb60c 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 3.3E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_11745 068fe4b67acc10e8f163c4deacacb60c 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 3.3E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_11745 068fe4b67acc10e8f163c4deacacb60c 212 SMART SM00421 148 205 4.0E-22 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_11745 068fe4b67acc10e8f163c4deacacb60c 212 SUPERFAMILY SSF52172 4 135 8.54E-35 T 12-10-2018 IPR011006 CheY-like superfamily M634_11745 068fe4b67acc10e8f163c4deacacb60c 212 SMART SM00448 5 118 1.7E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_11745 068fe4b67acc10e8f163c4deacacb60c 212 SUPERFAMILY SSF46894 140 211 1.84E-20 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M634_11745 068fe4b67acc10e8f163c4deacacb60c 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_11745 068fe4b67acc10e8f163c4deacacb60c 212 Pfam PF00072 Response regulator receiver domain 7 119 4.5E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_11745 068fe4b67acc10e8f163c4deacacb60c 212 Gene3D G3DSA:3.40.50.12740 5 211 1.7E-66 T 12-10-2018 M634_11745 068fe4b67acc10e8f163c4deacacb60c 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 205 1.7E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_02710 f0c94560bfdfc54a9e558bc13ba51a0d 164 Pfam PF04612 Type II secretion system (T2SS), protein M 7 163 5.4E-56 T 12-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 M634_02710 f0c94560bfdfc54a9e558bc13ba51a0d 164 PIRSF PIRSF006291 3 163 5.1E-40 T 12-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 M634_02710 f0c94560bfdfc54a9e558bc13ba51a0d 164 SUPERFAMILY SSF103054 86 163 2.88E-25 T 12-10-2018 IPR023229 Type II secretion system protein M, periplasmic domain superfamily M634_02710 f0c94560bfdfc54a9e558bc13ba51a0d 164 Gene3D G3DSA:3.30.1360.100 86 164 4.2E-31 T 12-10-2018 M634_18465 ce7406d994b2c49ad8e736d608194750 559 Pfam PF00849 RNA pseudouridylate synthase 365 512 3.8E-28 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 M634_18465 ce7406d994b2c49ad8e736d608194750 559 Gene3D G3DSA:3.30.2350.10 347 559 4.6E-61 T 12-10-2018 M634_18465 ce7406d994b2c49ad8e736d608194750 559 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 403 417 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 M634_18465 ce7406d994b2c49ad8e736d608194750 559 SUPERFAMILY SSF55120 350 556 1.15E-57 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 M634_22175 e2a6c13f6bcff51294614c101b828863 198 PIRSF PIRSF011489 1 196 1.5E-83 T 12-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 M634_22175 e2a6c13f6bcff51294614c101b828863 198 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 185 5.3E-28 T 12-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 M634_07320 5c0a2941430dea22c2ec94733a4a7b24 189 Pfam PF06693 Protein of unknown function (DUF1190) 41 184 4.0E-26 T 12-10-2018 IPR009576 Biofilm formation YgiB M634_03545 e13b15fe7f24eef660c6a0f3bf18ab62 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.251 T 12-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 M634_03545 e13b15fe7f24eef660c6a0f3bf18ab62 176 Gene3D G3DSA:3.90.80.10 1 175 2.3E-67 T 12-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 M634_03545 e13b15fe7f24eef660c6a0f3bf18ab62 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 12-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 M634_03545 e13b15fe7f24eef660c6a0f3bf18ab62 176 Pfam PF00719 Inorganic pyrophosphatase 18 173 3.1E-52 T 12-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 M634_03545 e13b15fe7f24eef660c6a0f3bf18ab62 176 SUPERFAMILY SSF50324 3 174 2.09E-65 T 12-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 M634_12930 1fdc2581865c854986d3d217be3e6c37 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 526 540 3.9E-26 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 M634_12930 1fdc2581865c854986d3d217be3e6c37 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 99 112 3.9E-26 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 M634_12930 1fdc2581865c854986d3d217be3e6c37 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 327 336 3.9E-26 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 M634_12930 1fdc2581865c854986d3d217be3e6c37 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 408 424 3.9E-26 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 M634_12930 1fdc2581865c854986d3d217be3e6c37 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 194 212 3.9E-26 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 M634_12930 1fdc2581865c854986d3d217be3e6c37 654 SMART SM00436 129 224 2.7E-31 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 M634_12930 1fdc2581865c854986d3d217be3e6c37 654 Gene3D G3DSA:1.10.290.10 293 422 8.9E-166 T 12-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 M634_12930 1fdc2581865c854986d3d217be3e6c37 654 Pfam PF01751 Toprim domain 4 132 1.3E-16 T 12-10-2018 IPR006171 TOPRIM domain M634_12930 1fdc2581865c854986d3d217be3e6c37 654 SMART SM00437 284 563 7.5E-89 T 12-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 M634_12930 1fdc2581865c854986d3d217be3e6c37 654 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 321 336 - T 12-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 M634_12930 1fdc2581865c854986d3d217be3e6c37 654 Pfam PF01131 DNA topoisomerase 159 598 3.1E-115 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 M634_12930 1fdc2581865c854986d3d217be3e6c37 654 Gene3D G3DSA:3.40.50.140 2 157 4.9E-61 T 12-10-2018 M634_12930 1fdc2581865c854986d3d217be3e6c37 654 Gene3D G3DSA:1.10.460.10 163 605 8.9E-166 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 M634_12930 1fdc2581865c854986d3d217be3e6c37 654 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 628 3.4E-239 T 12-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 M634_12930 1fdc2581865c854986d3d217be3e6c37 654 SMART SM00493 2 125 3.7E-28 T 12-10-2018 IPR006171 TOPRIM domain M634_12930 1fdc2581865c854986d3d217be3e6c37 654 SUPERFAMILY SSF56712 3 612 2.88E-184 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain M634_12930 1fdc2581865c854986d3d217be3e6c37 654 Gene3D G3DSA:2.70.20.10 218 493 8.9E-166 T 12-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 M634_12930 1fdc2581865c854986d3d217be3e6c37 654 Hamap MF_00953 DNA topoisomerase 3 [topB]. 2 651 64.393 T 12-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 M634_12290 18b0bda84ba23d09ebfb8e39d34ca237 192 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 29 189 3.9E-38 T 12-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component M634_12290 18b0bda84ba23d09ebfb8e39d34ca237 192 SUPERFAMILY SSF159594 29 192 2.28E-29 T 12-10-2018 M634_12290 18b0bda84ba23d09ebfb8e39d34ca237 192 Gene3D G3DSA:3.40.50.10610 19 192 1.4E-14 T 12-10-2018 M634_22370 1b168cca161e2a4e887c2b193304180f 652 Gene3D G3DSA:3.30.70.270 477 647 1.8E-56 T 12-10-2018 M634_22370 1b168cca161e2a4e887c2b193304180f 652 Gene3D G3DSA:1.20.1480.50 149 237 2.9E-7 T 12-10-2018 M634_22370 1b168cca161e2a4e887c2b193304180f 652 SUPERFAMILY SSF158472 180 230 1.27E-7 T 12-10-2018 M634_22370 1b168cca161e2a4e887c2b193304180f 652 SUPERFAMILY SSF55073 489 642 1.26E-46 T 12-10-2018 IPR029787 Nucleotide cyclase M634_22370 1b168cca161e2a4e887c2b193304180f 652 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 364 479 2.5E-11 T 12-10-2018 IPR000014 PAS domain M634_22370 1b168cca161e2a4e887c2b193304180f 652 SMART SM00267 473 644 1.5E-59 T 12-10-2018 IPR000160 GGDEF domain M634_22370 1b168cca161e2a4e887c2b193304180f 652 SUPERFAMILY SSF55785 234 349 2.09E-8 T 12-10-2018 IPR035965 PAS domain superfamily M634_22370 1b168cca161e2a4e887c2b193304180f 652 Pfam PF00990 Diguanylate cyclase, GGDEF domain 484 639 4.7E-48 T 12-10-2018 IPR000160 GGDEF domain M634_22370 1b168cca161e2a4e887c2b193304180f 652 Pfam PF00989 PAS fold 363 409 4.4E-7 T 12-10-2018 IPR013767 PAS fold GO:0006355 M634_22370 1b168cca161e2a4e887c2b193304180f 652 SMART SM00091 247 313 7.8E-5 T 12-10-2018 IPR000014 PAS domain M634_22370 1b168cca161e2a4e887c2b193304180f 652 SMART SM00091 359 425 9.9E-9 T 12-10-2018 IPR000014 PAS domain M634_22370 1b168cca161e2a4e887c2b193304180f 652 Pfam PF00672 HAMP domain 180 229 1.8E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_22370 1b168cca161e2a4e887c2b193304180f 652 SUPERFAMILY SSF55785 347 465 9.18E-13 T 12-10-2018 IPR035965 PAS domain superfamily M634_22370 1b168cca161e2a4e887c2b193304180f 652 Pfam PF13426 PAS domain 259 349 0.009 T 12-10-2018 IPR000014 PAS domain M634_22370 1b168cca161e2a4e887c2b193304180f 652 Pfam PF17152 Periplasmic sensor domain 37 142 9.4E-9 T 12-10-2018 IPR033417 Periplasmic sensor domain CHASE8 M634_22370 1b168cca161e2a4e887c2b193304180f 652 Gene3D G3DSA:3.30.450.20 355 476 1.3E-12 T 12-10-2018 M634_22370 1b168cca161e2a4e887c2b193304180f 652 SMART SM00304 180 233 2.0E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_22370 1b168cca161e2a4e887c2b193304180f 652 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 480 641 1.1E-44 T 12-10-2018 IPR000160 GGDEF domain M634_22370 1b168cca161e2a4e887c2b193304180f 652 Gene3D G3DSA:3.30.450.20 238 354 1.0E-7 T 12-10-2018 M634_15535 747159d89e49f49ce1aa59bcfef567c7 342 Pfam PF01170 Putative RNA methylase family UPF0020 134 295 3.3E-13 T 12-10-2018 IPR000241 Putative RNA methylase domain M634_15535 747159d89e49f49ce1aa59bcfef567c7 342 Gene3D G3DSA:3.40.50.150 105 329 1.2E-17 T 12-10-2018 M634_15535 747159d89e49f49ce1aa59bcfef567c7 342 SUPERFAMILY SSF53335 106 316 1.14E-23 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_21495 c730708bf01a45f83e2e2cbe538dc7ea 632 SUPERFAMILY SSF55718 506 611 1.01E-11 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily M634_21495 c730708bf01a45f83e2e2cbe538dc7ea 632 Gene3D G3DSA:3.30.1050.10 501 616 2.2E-19 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily M634_21495 c730708bf01a45f83e2e2cbe538dc7ea 632 Pfam PF14864 Alkyl sulfatase C-terminal 507 610 6.7E-12 T 12-10-2018 IPR029229 Alkyl sulfatase, C-terminal M634_21495 c730708bf01a45f83e2e2cbe538dc7ea 632 SUPERFAMILY SSF56281 79 490 1.22E-66 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M634_21495 c730708bf01a45f83e2e2cbe538dc7ea 632 Gene3D G3DSA:1.25.40.880 351 488 1.9E-40 T 12-10-2018 IPR038536 Alkyl/aryl-sulfatase, dimerisation domain superfamily M634_21495 c730708bf01a45f83e2e2cbe538dc7ea 632 Pfam PF00753 Metallo-beta-lactamase superfamily 93 169 5.2E-7 T 12-10-2018 IPR001279 Metallo-beta-lactamase M634_21495 c730708bf01a45f83e2e2cbe538dc7ea 632 Gene3D G3DSA:3.60.15.30 17 349 6.0E-61 T 12-10-2018 M634_21495 c730708bf01a45f83e2e2cbe538dc7ea 632 Pfam PF14863 Alkyl sulfatase dimerisation 352 487 1.7E-37 T 12-10-2018 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 M634_13830 3c5ff459068a7dd048fd0c7d620cc637 281 Gene3D G3DSA:3.60.20.10 1 259 1.8E-98 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal M634_13830 3c5ff459068a7dd048fd0c7d620cc637 281 SUPERFAMILY SSF56235 2 253 2.83E-51 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal M634_13830 3c5ff459068a7dd048fd0c7d620cc637 281 Pfam PF13230 Glutamine amidotransferases class-II 1 260 1.7E-113 T 12-10-2018 IPR026869 Putative glutamine amidotransferase type 2 M634_06260 a62300a2dc88d43eae2525a5121db9c0 290 PIRSF PIRSF001553 1 289 5.0E-135 T 12-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 M634_06260 a62300a2dc88d43eae2525a5121db9c0 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.536 T 12-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 M634_06260 a62300a2dc88d43eae2525a5121db9c0 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 6.8E-41 T 12-10-2018 M634_06260 a62300a2dc88d43eae2525a5121db9c0 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 6.8E-41 T 12-10-2018 M634_06260 a62300a2dc88d43eae2525a5121db9c0 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 6.8E-41 T 12-10-2018 M634_06260 a62300a2dc88d43eae2525a5121db9c0 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 6.8E-41 T 12-10-2018 M634_06260 a62300a2dc88d43eae2525a5121db9c0 290 SMART SM00881 4 100 6.0E-36 T 12-10-2018 IPR003781 CoA-binding GO:0048037 M634_06260 a62300a2dc88d43eae2525a5121db9c0 290 Pfam PF00549 CoA-ligase 151 271 2.0E-22 T 12-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 M634_06260 a62300a2dc88d43eae2525a5121db9c0 290 SUPERFAMILY SSF51735 1 122 4.5E-43 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_06260 a62300a2dc88d43eae2525a5121db9c0 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 287 1.3E-146 T 12-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 M634_06260 a62300a2dc88d43eae2525a5121db9c0 290 SUPERFAMILY SSF52210 123 287 2.88E-55 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 M634_06260 a62300a2dc88d43eae2525a5121db9c0 290 Gene3D G3DSA:3.40.50.720 2 123 1.1E-51 T 12-10-2018 M634_06260 a62300a2dc88d43eae2525a5121db9c0 290 Gene3D G3DSA:3.40.50.261 124 288 2.6E-76 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 M634_06260 a62300a2dc88d43eae2525a5121db9c0 290 Pfam PF02629 CoA binding domain 6 99 3.1E-31 T 12-10-2018 IPR003781 CoA-binding GO:0048037 M634_06260 a62300a2dc88d43eae2525a5121db9c0 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 12-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site M634_06260 a62300a2dc88d43eae2525a5121db9c0 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 12-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site M634_15840 d2303323f0423e1f3766caf0cf953d91 212 Gene3D G3DSA:3.10.450.710 25 204 4.3E-38 T 12-10-2018 M634_15840 d2303323f0423e1f3766caf0cf953d91 212 Pfam PF05494 MlaC protein 33 200 1.2E-45 T 12-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC M634_15840 d2303323f0423e1f3766caf0cf953d91 212 PIRSF PIRSF004649 1 212 1.7E-56 T 12-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC M634_02865 ede0acbd7e0c736b18c8afb80edb20db 608 SUPERFAMILY SSF53850 41 561 1.14E-93 T 12-10-2018 M634_02865 ede0acbd7e0c736b18c8afb80edb20db 608 Gene3D G3DSA:3.10.105.10 319 542 8.3E-40 T 12-10-2018 M634_02865 ede0acbd7e0c736b18c8afb80edb20db 608 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 90 484 2.6E-55 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain M634_02865 ede0acbd7e0c736b18c8afb80edb20db 608 PIRSF PIRSF002741 1 563 1.0E-66 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 M634_02865 ede0acbd7e0c736b18c8afb80edb20db 608 Gene3D G3DSA:3.40.190.10 19 318 6.6E-46 T 12-10-2018 M634_05195 10e67b000b233f458769662b21ef6ba5 147 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 16 39 1.7E-9 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M634_05195 10e67b000b233f458769662b21ef6ba5 147 SUPERFAMILY SSF54523 19 130 6.8E-19 T 12-10-2018 M634_05195 10e67b000b233f458769662b21ef6ba5 147 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 40 126 3.8E-14 T 12-10-2018 IPR031982 Type IV minor pilin ComP M634_05195 10e67b000b233f458769662b21ef6ba5 147 Pfam PF07963 Prokaryotic N-terminal methylation motif 16 39 5.3E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M634_05195 10e67b000b233f458769662b21ef6ba5 147 Gene3D G3DSA:3.30.700.10 20 145 7.5E-20 T 12-10-2018 M634_05195 10e67b000b233f458769662b21ef6ba5 147 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 17 37 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M634_17445 0eea7885a3a97d944d63b5b0a4362449 719 Pfam PF13614 AAA domain 536 648 6.5E-12 T 12-10-2018 IPR025669 AAA domain M634_17445 0eea7885a3a97d944d63b5b0a4362449 719 Gene3D G3DSA:3.40.50.300 441 719 1.4E-77 T 12-10-2018 M634_17445 0eea7885a3a97d944d63b5b0a4362449 719 SUPERFAMILY SSF52540 524 701 6.24E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_17445 0eea7885a3a97d944d63b5b0a4362449 719 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 506 710 1.1E-49 T 12-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 M634_17445 0eea7885a3a97d944d63b5b0a4362449 719 Pfam PF13807 G-rich domain on putative tyrosine kinase 368 449 5.8E-34 T 12-10-2018 IPR032807 Tyrosine kinase, G-rich domain M634_17445 0eea7885a3a97d944d63b5b0a4362449 719 Pfam PF02706 Chain length determinant protein 14 106 2.5E-20 T 12-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 M634_23295 1ad194d5104a761304b630677ea29eb7 450 Pfam PF00012 Hsp70 protein 129 259 1.6E-10 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M634_23295 1ad194d5104a761304b630677ea29eb7 450 Gene3D G3DSA:3.90.640.10 336 378 2.2E-11 T 12-10-2018 M634_23295 1ad194d5104a761304b630677ea29eb7 450 Gene3D G3DSA:3.30.420.40 379 433 2.2E-11 T 12-10-2018 M634_23295 1ad194d5104a761304b630677ea29eb7 450 SUPERFAMILY SSF53067 1 205 6.22E-26 T 12-10-2018 M634_23295 1ad194d5104a761304b630677ea29eb7 450 SUPERFAMILY SSF53067 208 447 5.99E-33 T 12-10-2018 M634_23295 1ad194d5104a761304b630677ea29eb7 450 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 213 226 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 M634_22125 8ad854c22e9cbddb4e694007e2eb6ab8 1054 ProSitePatterns PS01095 Chitinases family 18 active site. 471 479 - T 12-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 M634_22125 8ad854c22e9cbddb4e694007e2eb6ab8 1054 Pfam PF06483 Chitinase C 810 975 2.2E-72 T 12-10-2018 IPR009470 Chitinase, C-terminal KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 M634_22125 8ad854c22e9cbddb4e694007e2eb6ab8 1054 SUPERFAMILY SSF51055 22 86 6.93E-18 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M634_22125 8ad854c22e9cbddb4e694007e2eb6ab8 1054 Pfam PF14600 Cellulose-binding domain 999 1051 6.9E-17 T 12-10-2018 IPR032798 Endoglucanase Z, cellulose-binding domain KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 M634_22125 8ad854c22e9cbddb4e694007e2eb6ab8 1054 Gene3D G3DSA:2.10.10.20 16 88 8.4E-17 T 12-10-2018 M634_22125 8ad854c22e9cbddb4e694007e2eb6ab8 1054 Gene3D G3DSA:3.10.50.10 723 756 4.7E-14 T 12-10-2018 IPR029070 Chitinase insertion domain superfamily M634_22125 8ad854c22e9cbddb4e694007e2eb6ab8 1054 Gene3D G3DSA:3.20.20.80 757 783 4.7E-14 T 12-10-2018 M634_22125 8ad854c22e9cbddb4e694007e2eb6ab8 1054 Gene3D G3DSA:2.60.40.10 198 285 8.1E-19 T 12-10-2018 IPR013783 Immunoglobulin-like fold M634_22125 8ad854c22e9cbddb4e694007e2eb6ab8 1054 SUPERFAMILY SSF51055 996 1053 3.01E-15 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M634_22125 8ad854c22e9cbddb4e694007e2eb6ab8 1054 SMART SM00495 1009 1051 2.6E-9 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M634_22125 8ad854c22e9cbddb4e694007e2eb6ab8 1054 SMART SM00495 37 82 1.1E-14 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M634_22125 8ad854c22e9cbddb4e694007e2eb6ab8 1054 SMART SM00636 322 782 7.6E-123 T 12-10-2018 IPR011583 Chitinase II GO:0008061 M634_22125 8ad854c22e9cbddb4e694007e2eb6ab8 1054 Gene3D G3DSA:2.10.10.20 994 1053 2.0E-19 T 12-10-2018 M634_22125 8ad854c22e9cbddb4e694007e2eb6ab8 1054 SUPERFAMILY SSF54556 629 752 2.44E-14 T 12-10-2018 IPR029070 Chitinase insertion domain superfamily M634_22125 8ad854c22e9cbddb4e694007e2eb6ab8 1054 Gene3D G3DSA:2.60.40.10 98 190 8.4E-25 T 12-10-2018 IPR013783 Immunoglobulin-like fold M634_22125 8ad854c22e9cbddb4e694007e2eb6ab8 1054 Gene3D G3DSA:3.20.20.80 304 651 7.2E-81 T 12-10-2018 M634_22125 8ad854c22e9cbddb4e694007e2eb6ab8 1054 SUPERFAMILY SSF51445 316 786 2.61E-75 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M634_22125 8ad854c22e9cbddb4e694007e2eb6ab8 1054 Pfam PF00704 Glycosyl hydrolases family 18 323 782 1.1E-86 T 12-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 M634_05125 3924744742e534ca25c9e59c1a7383c0 510 Pfam PF00583 Acetyltransferase (GNAT) family 47 138 3.9E-7 T 12-10-2018 IPR000182 GNAT domain M634_05125 3924744742e534ca25c9e59c1a7383c0 510 SUPERFAMILY SSF55729 5 140 6.35E-17 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_05125 3924744742e534ca25c9e59c1a7383c0 510 Gene3D G3DSA:3.40.630.30 4 221 4.8E-49 T 12-10-2018 M634_05125 3924744742e534ca25c9e59c1a7383c0 510 Pfam PF00795 Carbon-nitrogen hydrolase 225 484 8.0E-35 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 M634_05125 3924744742e534ca25c9e59c1a7383c0 510 SUPERFAMILY SSF56317 222 491 2.88E-60 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily M634_05125 3924744742e534ca25c9e59c1a7383c0 510 Gene3D G3DSA:3.60.110.10 222 506 4.9E-61 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily M634_09230 5615f1e38088e27d5007a16d87d37f41 380 PRINTS PR00143 Citrate synthase signature 130 143 1.3E-35 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 M634_09230 5615f1e38088e27d5007a16d87d37f41 380 PRINTS PR00143 Citrate synthase signature 256 276 1.3E-35 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 M634_09230 5615f1e38088e27d5007a16d87d37f41 380 PRINTS PR00143 Citrate synthase signature 181 196 1.3E-35 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 M634_09230 5615f1e38088e27d5007a16d87d37f41 380 PRINTS PR00143 Citrate synthase signature 313 329 1.3E-35 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 M634_09230 5615f1e38088e27d5007a16d87d37f41 380 PRINTS PR00143 Citrate synthase signature 203 231 1.3E-35 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 M634_09230 5615f1e38088e27d5007a16d87d37f41 380 PRINTS PR00143 Citrate synthase signature 333 347 1.3E-35 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 M634_09230 5615f1e38088e27d5007a16d87d37f41 380 PIRSF PIRSF001369 8 380 8.5E-116 T 12-10-2018 IPR024176 Citrate synthase, bacterial-type M634_09230 5615f1e38088e27d5007a16d87d37f41 380 Gene3D G3DSA:1.10.580.10 36 360 2.7E-116 T 12-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 M634_09230 5615f1e38088e27d5007a16d87d37f41 380 SUPERFAMILY SSF48256 14 380 1.57E-123 T 12-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 M634_09230 5615f1e38088e27d5007a16d87d37f41 380 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 15 380 2.8E-160 T 12-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 M634_09230 5615f1e38088e27d5007a16d87d37f41 380 ProSitePatterns PS00480 Citrate synthase signature. 263 275 - T 12-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 M634_09230 5615f1e38088e27d5007a16d87d37f41 380 Pfam PF00285 Citrate synthase, C-terminal domain 15 362 8.4E-112 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 M634_09230 5615f1e38088e27d5007a16d87d37f41 380 Gene3D G3DSA:1.10.230.10 229 327 2.7E-116 T 12-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain M634_06895 16b3b265b1fd2bc39da4e2f6f87c81c3 405 Pfam PF02687 FtsX-like permease family 299 398 1.6E-11 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 M634_06895 16b3b265b1fd2bc39da4e2f6f87c81c3 405 Pfam PF12704 MacB-like periplasmic core domain 32 212 1.1E-13 T 12-10-2018 IPR025857 MacB-like periplasmic core domain M634_06895 16b3b265b1fd2bc39da4e2f6f87c81c3 405 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 7 405 6.7E-134 T 12-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 M634_17200 b58adc71dee7cc297b4c78e89ba63efa 445 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 2 100 2.4E-15 T 12-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 M634_17200 b58adc71dee7cc297b4c78e89ba63efa 445 Pfam PF07196 Flagellin hook IN motif 124 181 1.1E-5 T 12-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 M634_17200 b58adc71dee7cc297b4c78e89ba63efa 445 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 216 439 8.1E-52 T 12-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 M634_14785 a676d4a45cd8fa9170d09b66f949916f 1128 PRINTS PR00344 Bacterial sensor protein C-terminal signature 668 681 2.1E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_14785 a676d4a45cd8fa9170d09b66f949916f 1128 PRINTS PR00344 Bacterial sensor protein C-terminal signature 644 662 2.1E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_14785 a676d4a45cd8fa9170d09b66f949916f 1128 PRINTS PR00344 Bacterial sensor protein C-terminal signature 609 623 2.1E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_14785 a676d4a45cd8fa9170d09b66f949916f 1128 PRINTS PR00344 Bacterial sensor protein C-terminal signature 627 637 2.1E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_14785 a676d4a45cd8fa9170d09b66f949916f 1128 Gene3D G3DSA:3.30.450.20 253 358 4.7E-8 T 12-10-2018 M634_14785 a676d4a45cd8fa9170d09b66f949916f 1128 SMART SM00091 873 938 7.0E-6 T 12-10-2018 IPR000014 PAS domain M634_14785 a676d4a45cd8fa9170d09b66f949916f 1128 Pfam PF00672 HAMP domain 379 427 1.2E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_14785 a676d4a45cd8fa9170d09b66f949916f 1128 SMART SM00388 459 527 1.4E-17 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_14785 a676d4a45cd8fa9170d09b66f949916f 1128 SUPERFAMILY SSF52172 718 843 1.25E-40 T 12-10-2018 IPR011006 CheY-like superfamily M634_14785 a676d4a45cd8fa9170d09b66f949916f 1128 Pfam PF13188 PAS domain 879 917 1.6E-4 T 12-10-2018 IPR000014 PAS domain M634_14785 a676d4a45cd8fa9170d09b66f949916f 1128 Pfam PF00072 Response regulator receiver domain 726 836 1.0E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_14785 a676d4a45cd8fa9170d09b66f949916f 1128 SUPERFAMILY SSF158472 378 429 1.27E-10 T 12-10-2018 M634_14785 a676d4a45cd8fa9170d09b66f949916f 1128 SMART SM00304 377 430 1.3E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_14785 a676d4a45cd8fa9170d09b66f949916f 1128 Gene3D G3DSA:3.30.565.10 529 689 1.9E-45 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_14785 a676d4a45cd8fa9170d09b66f949916f 1128 Gene3D G3DSA:3.30.450.20 852 954 4.6E-8 T 12-10-2018 M634_14785 a676d4a45cd8fa9170d09b66f949916f 1128 Gene3D G3DSA:1.10.8.500 376 430 5.8E-16 T 12-10-2018 M634_14785 a676d4a45cd8fa9170d09b66f949916f 1128 SMART SM00387 573 684 4.7E-39 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_14785 a676d4a45cd8fa9170d09b66f949916f 1128 SUPERFAMILY SSF55785 860 927 2.09E-8 T 12-10-2018 IPR035965 PAS domain superfamily M634_14785 a676d4a45cd8fa9170d09b66f949916f 1128 SMART SM00448 722 835 3.3E-44 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_14785 a676d4a45cd8fa9170d09b66f949916f 1128 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 574 683 1.7E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_14785 a676d4a45cd8fa9170d09b66f949916f 1128 Gene3D G3DSA:1.10.287.130 442 528 2.8E-20 T 12-10-2018 M634_14785 a676d4a45cd8fa9170d09b66f949916f 1128 SUPERFAMILY SSF47384 446 527 2.35E-18 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M634_14785 a676d4a45cd8fa9170d09b66f949916f 1128 Pfam PF00512 His Kinase A (phospho-acceptor) domain 460 525 2.3E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_14785 a676d4a45cd8fa9170d09b66f949916f 1128 SUPERFAMILY SSF55874 516 687 2.1E-46 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_14785 a676d4a45cd8fa9170d09b66f949916f 1128 Gene3D G3DSA:3.40.50.2300 715 851 5.0E-40 T 12-10-2018 M634_21485 0f1f4d73d0f13955c281383a0c797e12 303 SUPERFAMILY SSF46785 2 112 7.61E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_21485 0f1f4d73d0f13955c281383a0c797e12 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 6.0E-13 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_21485 0f1f4d73d0f13955c281383a0c797e12 303 Gene3D G3DSA:3.40.190.10 91 292 8.7E-53 T 12-10-2018 M634_21485 0f1f4d73d0f13955c281383a0c797e12 303 SUPERFAMILY SSF53850 89 300 6.83E-33 T 12-10-2018 M634_21485 0f1f4d73d0f13955c281383a0c797e12 303 Pfam PF03466 LysR substrate binding domain 88 296 6.1E-33 T 12-10-2018 IPR005119 LysR, substrate-binding M634_21485 0f1f4d73d0f13955c281383a0c797e12 303 Gene3D G3DSA:1.10.10.10 1 90 1.1E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_21485 0f1f4d73d0f13955c281383a0c797e12 303 Gene3D G3DSA:3.40.190.10 163 267 8.7E-53 T 12-10-2018 M634_06155 d35787e7b14bd4f46dd0418a543fe4fe 404 Gene3D G3DSA:3.30.420.40 90 384 1.9E-94 T 12-10-2018 M634_06155 d35787e7b14bd4f46dd0418a543fe4fe 404 Gene3D G3DSA:1.10.10.10 3 79 3.9E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_06155 d35787e7b14bd4f46dd0418a543fe4fe 404 Pfam PF00480 ROK family 86 390 2.0E-76 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 M634_06155 d35787e7b14bd4f46dd0418a543fe4fe 404 Gene3D G3DSA:3.30.420.40 207 376 1.9E-94 T 12-10-2018 M634_06155 d35787e7b14bd4f46dd0418a543fe4fe 404 SUPERFAMILY SSF53067 85 391 1.94E-56 T 12-10-2018 M634_06155 d35787e7b14bd4f46dd0418a543fe4fe 404 SUPERFAMILY SSF46785 11 75 6.18E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_06155 d35787e7b14bd4f46dd0418a543fe4fe 404 ProSitePatterns PS01125 ROK family signature. 217 244 - T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 M634_10585 8b61c5b8b5ce646472b4903a48d7071a 390 Gene3D G3DSA:2.60.200.60 54 95 1.7E-11 T 12-10-2018 M634_10585 8b61c5b8b5ce646472b4903a48d7071a 390 Gene3D G3DSA:2.60.200.60 1 53 3.8E-10 T 12-10-2018 M634_10585 8b61c5b8b5ce646472b4903a48d7071a 390 Pfam PF05488 PAAR motif 21 86 1.0E-23 T 12-10-2018 IPR008727 PAAR motif M634_04655 4bf940c6f3703d8491fc2c090b8d2908 108 SUPERFAMILY SSF69754 1 103 1.11E-29 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like M634_04655 4bf940c6f3703d8491fc2c090b8d2908 108 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 99 5.0E-31 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 M634_04655 4bf940c6f3703d8491fc2c090b8d2908 108 Gene3D G3DSA:3.30.160.100 1 105 1.9E-33 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like M634_04655 4bf940c6f3703d8491fc2c090b8d2908 108 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 92 5.1E-23 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 M634_18040 18c672925e82d9a78f1e6bf37b0cd113 177 Gene3D G3DSA:3.40.630.30 2 171 9.6E-35 T 12-10-2018 M634_18040 18c672925e82d9a78f1e6bf37b0cd113 177 Pfam PF13302 Acetyltransferase (GNAT) domain 11 147 3.8E-24 T 12-10-2018 IPR000182 GNAT domain M634_18040 18c672925e82d9a78f1e6bf37b0cd113 177 SUPERFAMILY SSF55729 2 171 8.13E-34 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_06800 993850fd3a0f95df72daf862f64e6ed9 244 SUPERFAMILY SSF75217 94 243 3.53E-34 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases M634_06800 993850fd3a0f95df72daf862f64e6ed9 244 Gene3D G3DSA:3.40.1280.10 96 244 1.1E-40 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal M634_06800 993850fd3a0f95df72daf862f64e6ed9 244 Pfam PF00588 SpoU rRNA Methylase family 102 236 1.8E-29 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 M634_06800 993850fd3a0f95df72daf862f64e6ed9 244 Gene3D G3DSA:3.30.1330.30 1 94 3.9E-17 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like M634_06800 993850fd3a0f95df72daf862f64e6ed9 244 SUPERFAMILY SSF55315 4 93 3.77E-13 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like M634_01545 7ba05d32130f05a911522b9202955d5a 437 Gene3D G3DSA:3.40.50.300 2 222 5.6E-72 T 12-10-2018 M634_01545 7ba05d32130f05a911522b9202955d5a 437 Gene3D G3DSA:3.40.50.300 229 406 1.2E-46 T 12-10-2018 M634_01545 7ba05d32130f05a911522b9202955d5a 437 SMART SM00490 270 351 1.2E-32 T 12-10-2018 IPR001650 Helicase, C-terminal M634_01545 7ba05d32130f05a911522b9202955d5a 437 Pfam PF00271 Helicase conserved C-terminal domain 243 351 1.6E-30 T 12-10-2018 IPR001650 Helicase, C-terminal M634_01545 7ba05d32130f05a911522b9202955d5a 437 SMART SM00487 28 234 1.4E-53 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M634_01545 7ba05d32130f05a911522b9202955d5a 437 SUPERFAMILY SSF52540 85 363 1.57E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_01545 7ba05d32130f05a911522b9202955d5a 437 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.667 T 12-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 M634_01545 7ba05d32130f05a911522b9202955d5a 437 Pfam PF00270 DEAD/DEAH box helicase 33 207 1.1E-45 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 M634_01545 7ba05d32130f05a911522b9202955d5a 437 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site M634_03630 dec8d8780046449d053d2daa4f49e6f3 390 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 3.4E-143 T 12-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 M634_03630 dec8d8780046449d053d2daa4f49e6f3 390 Pfam PF01018 GTP1/OBG 4 156 9.9E-56 T 12-10-2018 IPR006169 GTP1/OBG domain M634_03630 dec8d8780046449d053d2daa4f49e6f3 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 7.1E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M634_03630 dec8d8780046449d053d2daa4f49e6f3 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 7.1E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M634_03630 dec8d8780046449d053d2daa4f49e6f3 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 7.1E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M634_03630 dec8d8780046449d053d2daa4f49e6f3 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 7.1E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M634_03630 dec8d8780046449d053d2daa4f49e6f3 390 PIRSF PIRSF002401 1 375 1.1E-137 T 12-10-2018 IPR035101 GTP-binding protein, Obg-type M634_03630 dec8d8780046449d053d2daa4f49e6f3 390 Hamap MF_01454 GTPase Obg [obg]. 2 333 47.059 T 12-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 M634_03630 dec8d8780046449d053d2daa4f49e6f3 390 SUPERFAMILY SSF82051 2 157 3.4E-55 T 12-10-2018 IPR036726 GTP1/OBG domain superfamily M634_03630 dec8d8780046449d053d2daa4f49e6f3 390 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 12-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 M634_03630 dec8d8780046449d053d2daa4f49e6f3 390 Gene3D G3DSA:2.70.210.12 1 158 3.3E-58 T 12-10-2018 IPR036726 GTP1/OBG domain superfamily M634_03630 dec8d8780046449d053d2daa4f49e6f3 390 Pfam PF01926 50S ribosome-binding GTPase 161 284 4.1E-23 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M634_03630 dec8d8780046449d053d2daa4f49e6f3 390 Gene3D G3DSA:3.40.50.300 159 336 1.2E-51 T 12-10-2018 M634_03630 dec8d8780046449d053d2daa4f49e6f3 390 SUPERFAMILY SSF52540 151 340 1.13E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_08470 d20fe0ed3a8a4c848fe1c3b38ea815f9 255 Gene3D G3DSA:3.40.50.300 8 254 4.4E-51 T 12-10-2018 M634_08470 d20fe0ed3a8a4c848fe1c3b38ea815f9 255 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 1 255 44.971 T 12-10-2018 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 M634_08470 d20fe0ed3a8a4c848fe1c3b38ea815f9 255 Pfam PF00005 ABC transporter 15 168 6.7E-20 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_08470 d20fe0ed3a8a4c848fe1c3b38ea815f9 255 SUPERFAMILY SSF52540 16 231 7.14E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_08470 d20fe0ed3a8a4c848fe1c3b38ea815f9 255 SMART SM00382 22 217 5.8E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_06920 9d7ddaf0cc7862044f0392fd59388420 582 SUPERFAMILY SSF90123 14 327 8.11E-76 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M634_06920 9d7ddaf0cc7862044f0392fd59388420 582 Gene3D G3DSA:1.20.1560.10 2 328 8.0E-83 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M634_06920 9d7ddaf0cc7862044f0392fd59388420 582 SMART SM00382 368 555 4.2E-20 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_06920 9d7ddaf0cc7862044f0392fd59388420 582 Gene3D G3DSA:3.40.50.300 329 581 1.9E-96 T 12-10-2018 M634_06920 9d7ddaf0cc7862044f0392fd59388420 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 582 1.2E-240 T 12-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 M634_06920 9d7ddaf0cc7862044f0392fd59388420 582 Pfam PF00005 ABC transporter 359 509 1.5E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_06920 9d7ddaf0cc7862044f0392fd59388420 582 Pfam PF00664 ABC transporter transmembrane region 27 293 1.4E-56 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 M634_06920 9d7ddaf0cc7862044f0392fd59388420 582 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_06920 9d7ddaf0cc7862044f0392fd59388420 582 SUPERFAMILY SSF52540 331 580 3.69E-93 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_23815 fd9bb26d3dfefaf554a9efe033dfe797 157 SUPERFAMILY SSF54534 19 156 2.55E-52 T 12-10-2018 M634_23815 fd9bb26d3dfefaf554a9efe033dfe797 157 Gene3D G3DSA:3.10.50.40 21 157 9.2E-54 T 12-10-2018 M634_23815 fd9bb26d3dfefaf554a9efe033dfe797 157 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 66 154 1.2E-27 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain M634_23815 fd9bb26d3dfefaf554a9efe033dfe797 157 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 24 59 7.4E-11 T 12-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 M634_16695 335dd627fabda48bcbc0073234cbc429 576 SUPERFAMILY SSF52540 319 554 1.05E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_16695 335dd627fabda48bcbc0073234cbc429 576 ProSitePatterns PS00211 ABC transporters family signature. 467 481 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_16695 335dd627fabda48bcbc0073234cbc429 576 SUPERFAMILY SSF90123 22 311 1.57E-35 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M634_16695 335dd627fabda48bcbc0073234cbc429 576 Pfam PF00005 ABC transporter 347 494 3.4E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_16695 335dd627fabda48bcbc0073234cbc429 576 Gene3D G3DSA:3.40.50.300 315 560 8.2E-65 T 12-10-2018 M634_16695 335dd627fabda48bcbc0073234cbc429 576 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 26 556 2.2E-183 T 12-10-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 M634_16695 335dd627fabda48bcbc0073234cbc429 576 SMART SM00382 356 542 2.1E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_16695 335dd627fabda48bcbc0073234cbc429 576 Gene3D G3DSA:1.20.1560.10 9 313 2.1E-25 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M634_17425 458a4a3311c8d71c5b0355c59a08cf04 213 Pfam PF01914 MarC family integral membrane protein 8 206 1.1E-52 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 M634_17425 458a4a3311c8d71c5b0355c59a08cf04 213 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 8 203 1.2E-49 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 M634_11780 32e3f37052c442c4a3dbcdd098d69f05 218 Gene3D G3DSA:3.60.15.10 3 213 6.5E-76 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M634_11780 32e3f37052c442c4a3dbcdd098d69f05 218 SUPERFAMILY SSF56281 5 211 2.3E-54 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M634_11780 32e3f37052c442c4a3dbcdd098d69f05 218 Pfam PF00753 Metallo-beta-lactamase superfamily 14 195 1.2E-28 T 12-10-2018 IPR001279 Metallo-beta-lactamase M634_11780 32e3f37052c442c4a3dbcdd098d69f05 218 SMART SM00849 14 195 6.7E-39 T 12-10-2018 IPR001279 Metallo-beta-lactamase M634_08895 391dc2aee22da853ef2fcdc64eb98d79 205 SMART SM00671 132 168 0.054 T 12-10-2018 IPR006597 Sel1-like repeat M634_08895 391dc2aee22da853ef2fcdc64eb98d79 205 SMART SM00671 65 96 6.2 T 12-10-2018 IPR006597 Sel1-like repeat M634_08895 391dc2aee22da853ef2fcdc64eb98d79 205 Gene3D G3DSA:1.25.40.10 30 184 8.1E-19 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_08895 391dc2aee22da853ef2fcdc64eb98d79 205 SUPERFAMILY SSF81901 50 173 2.22E-15 T 12-10-2018 M634_15835 93be22db89a161c43efe39f92aff81ea 106 SUPERFAMILY SSF52091 14 97 8.83E-15 T 12-10-2018 IPR036513 STAS domain superfamily M634_15835 93be22db89a161c43efe39f92aff81ea 106 Pfam PF13466 STAS domain 15 93 1.2E-19 T 12-10-2018 IPR002645 STAS domain M634_15835 93be22db89a161c43efe39f92aff81ea 106 Gene3D G3DSA:3.30.750.24 8 102 4.1E-12 T 12-10-2018 IPR036513 STAS domain superfamily M634_11870 650bd1ce969095495ea94c509bcbcf30 878 Gene3D G3DSA:2.120.10.90 534 840 1.0E-126 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal M634_11870 650bd1ce969095495ea94c509bcbcf30 878 Gene3D G3DSA:3.30.1360.40 236 332 1.3E-237 T 12-10-2018 M634_11870 650bd1ce969095495ea94c509bcbcf30 878 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 5.1E-159 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 M634_11870 650bd1ce969095495ea94c509bcbcf30 878 Gene3D G3DSA:3.90.199.10 33 520 1.3E-237 T 12-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 M634_11870 650bd1ce969095495ea94c509bcbcf30 878 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 840 24.644 T 12-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 M634_11870 650bd1ce969095495ea94c509bcbcf30 878 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 838 0.0 T 12-10-2018 M634_11870 650bd1ce969095495ea94c509bcbcf30 878 SUPERFAMILY SSF56719 30 520 2.75E-188 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 M634_11870 650bd1ce969095495ea94c509bcbcf30 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 742 788 1.2E-12 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 M634_11870 650bd1ce969095495ea94c509bcbcf30 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 792 838 2.7E-12 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 M634_11870 650bd1ce969095495ea94c509bcbcf30 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 736 8.5E-16 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 M634_11870 650bd1ce969095495ea94c509bcbcf30 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 637 6.4E-11 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 M634_11870 650bd1ce969095495ea94c509bcbcf30 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 583 6.5E-7 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 M634_11870 650bd1ce969095495ea94c509bcbcf30 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 687 3.2E-8 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 M634_11870 650bd1ce969095495ea94c509bcbcf30 878 Gene3D G3DSA:1.10.268.10 369 492 1.3E-237 T 12-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 M634_11870 650bd1ce969095495ea94c509bcbcf30 878 SMART SM00434 11 498 0.0 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 M634_11870 650bd1ce969095495ea94c509bcbcf30 878 SUPERFAMILY SSF101904 532 851 5.89E-114 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal M634_05330 dbc986f5d8ed8f1ce7f85f0b82388405 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 2.4E-55 T 12-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 M634_05330 dbc986f5d8ed8f1ce7f85f0b82388405 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 9.7E-58 T 12-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 M634_05330 dbc986f5d8ed8f1ce7f85f0b82388405 156 SUPERFAMILY SSF52121 4 154 4.58E-61 T 12-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 M634_05330 dbc986f5d8ed8f1ce7f85f0b82388405 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.315 T 12-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 M634_05330 dbc986f5d8ed8f1ce7f85f0b82388405 156 Gene3D G3DSA:3.40.50.960 1 156 1.9E-64 T 12-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 M634_11315 92fbaf07bcd298583bfef222a432fc43 202 TIGRFAM TIGR02681 phage_pRha: phage regulatory protein, Rha family 22 120 5.6E-27 T 12-10-2018 IPR014054 Bacteriophage regulatory protein, Rha family M634_11315 92fbaf07bcd298583bfef222a432fc43 202 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 28 114 3.2E-26 T 12-10-2018 IPR014054 Bacteriophage regulatory protein, Rha family M634_21170 a76ee0ff17619fe08daeb31e49fa0b65 251 SMART SM00382 26 213 8.7E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_21170 a76ee0ff17619fe08daeb31e49fa0b65 251 SUPERFAMILY SSF52540 2 227 9.44E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_21170 a76ee0ff17619fe08daeb31e49fa0b65 251 Gene3D G3DSA:3.40.50.300 1 249 3.2E-61 T 12-10-2018 M634_21170 a76ee0ff17619fe08daeb31e49fa0b65 251 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_21170 a76ee0ff17619fe08daeb31e49fa0b65 251 Pfam PF00005 ABC transporter 19 164 6.5E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_14240 7fb249d356b338e9de359e7de8266989 445 SUPERFAMILY SSF53633 4 294 5.11E-67 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily M634_14240 7fb249d356b338e9de359e7de8266989 445 Pfam PF00583 Acetyltransferase (GNAT) family 334 417 2.3E-8 T 12-10-2018 IPR000182 GNAT domain M634_14240 7fb249d356b338e9de359e7de8266989 445 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 8 444 1.3E-200 T 12-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 M634_14240 7fb249d356b338e9de359e7de8266989 445 Pfam PF00696 Amino acid kinase family 25 270 3.1E-28 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 M634_14240 7fb249d356b338e9de359e7de8266989 445 Gene3D G3DSA:3.40.1160.10 7 296 2.5E-84 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily M634_14240 7fb249d356b338e9de359e7de8266989 445 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 445 223.476 T 12-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 M634_14240 7fb249d356b338e9de359e7de8266989 445 PIRSF PIRSF000423 1 445 1.3E-203 T 12-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 M634_14240 7fb249d356b338e9de359e7de8266989 445 Gene3D G3DSA:3.40.630.30 297 445 4.4E-37 T 12-10-2018 M634_14240 7fb249d356b338e9de359e7de8266989 445 SUPERFAMILY SSF55729 300 425 1.66E-17 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_17160 b7a958dae37603f25805ec7284b6e8d4 252 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 55 251 2.2E-76 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 M634_17160 b7a958dae37603f25805ec7284b6e8d4 252 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 228 240 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M634_17160 b7a958dae37603f25805ec7284b6e8d4 252 Pfam PF00813 FliP family 55 247 1.7E-75 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M634_17160 b7a958dae37603f25805ec7284b6e8d4 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 180 200 6.9E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M634_17160 b7a958dae37603f25805ec7284b6e8d4 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 72 92 6.9E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M634_17160 b7a958dae37603f25805ec7284b6e8d4 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 225 250 6.9E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M634_17160 b7a958dae37603f25805ec7284b6e8d4 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 53 72 6.9E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M634_17160 b7a958dae37603f25805ec7284b6e8d4 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 92 111 6.9E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M634_17160 b7a958dae37603f25805ec7284b6e8d4 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 201 222 6.9E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M634_17160 b7a958dae37603f25805ec7284b6e8d4 252 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 180 195 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M634_17160 b7a958dae37603f25805ec7284b6e8d4 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 151 163 3.8E-14 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 M634_17160 b7a958dae37603f25805ec7284b6e8d4 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 111 123 3.8E-14 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 M634_17160 b7a958dae37603f25805ec7284b6e8d4 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 123 137 3.8E-14 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 M634_17160 b7a958dae37603f25805ec7284b6e8d4 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 51 60 3.8E-14 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 M634_17160 b7a958dae37603f25805ec7284b6e8d4 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 173 185 3.8E-14 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 M634_17160 b7a958dae37603f25805ec7284b6e8d4 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 241 251 3.8E-14 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 M634_20220 de808438479d236f8427ebc9a3fb26b2 282 Pfam PF01734 Patatin-like phospholipase 9 175 6.2E-17 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 M634_20220 de808438479d236f8427ebc9a3fb26b2 282 SUPERFAMILY SSF52151 6 279 3.4E-35 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase M634_20220 de808438479d236f8427ebc9a3fb26b2 282 Gene3D G3DSA:3.40.1090.10 2 87 3.2E-8 T 12-10-2018 M634_20220 de808438479d236f8427ebc9a3fb26b2 282 Gene3D G3DSA:3.40.1090.10 89 233 2.0E-11 T 12-10-2018 M634_10080 258d57686988dfe015823b96a745edd3 203 SUPERFAMILY SSF89155 6 198 1.09E-49 T 12-10-2018 IPR036411 TorD-like superfamily M634_10080 258d57686988dfe015823b96a745edd3 203 Gene3D G3DSA:1.10.3480.10 2 199 1.8E-45 T 12-10-2018 M634_10080 258d57686988dfe015823b96a745edd3 203 PIRSF PIRSF004690 2 198 1.2E-36 T 12-10-2018 IPR026269 Tat proofreading chaperone DmsD-type M634_10080 258d57686988dfe015823b96a745edd3 203 Pfam PF02613 Nitrate reductase delta subunit 40 157 7.6E-27 T 12-10-2018 IPR020945 DMSO/Nitrate reductase chaperone M634_06740 02835a463225f44b4b84e13a9ea1a1c3 1037 Gene3D G3DSA:3.30.70.1440 655 848 0.0 T 12-10-2018 M634_06740 02835a463225f44b4b84e13a9ea1a1c3 1037 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 6.6E-276 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_06740 02835a463225f44b4b84e13a9ea1a1c3 1037 Gene3D G3DSA:3.30.70.1430 556 654 0.0 T 12-10-2018 M634_06740 02835a463225f44b4b84e13a9ea1a1c3 1037 Gene3D G3DSA:3.30.70.1430 40 799 0.0 T 12-10-2018 M634_06740 02835a463225f44b4b84e13a9ea1a1c3 1037 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 9.0E-73 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_06740 02835a463225f44b4b84e13a9ea1a1c3 1037 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 9.0E-73 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_06740 02835a463225f44b4b84e13a9ea1a1c3 1037 PRINTS PR00702 Acriflavin resistance protein family signature 611 625 9.0E-73 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_06740 02835a463225f44b4b84e13a9ea1a1c3 1037 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 9.0E-73 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_06740 02835a463225f44b4b84e13a9ea1a1c3 1037 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 9.0E-73 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_06740 02835a463225f44b4b84e13a9ea1a1c3 1037 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 9.0E-73 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_06740 02835a463225f44b4b84e13a9ea1a1c3 1037 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 9.0E-73 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_06740 02835a463225f44b4b84e13a9ea1a1c3 1037 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 9.0E-73 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_06740 02835a463225f44b4b84e13a9ea1a1c3 1037 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 9.0E-73 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_06740 02835a463225f44b4b84e13a9ea1a1c3 1037 Gene3D G3DSA:1.20.1640.10 502 1005 0.0 T 12-10-2018 M634_06740 02835a463225f44b4b84e13a9ea1a1c3 1037 Gene3D G3DSA:3.30.2090.10 178 269 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_06740 02835a463225f44b4b84e13a9ea1a1c3 1037 SUPERFAMILY SSF82866 290 488 8.76E-45 T 12-10-2018 M634_06740 02835a463225f44b4b84e13a9ea1a1c3 1037 Gene3D G3DSA:3.30.70.1320 134 326 0.0 T 12-10-2018 M634_06740 02835a463225f44b4b84e13a9ea1a1c3 1037 SUPERFAMILY SSF82714 183 266 3.14E-13 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_06740 02835a463225f44b4b84e13a9ea1a1c3 1037 Gene3D G3DSA:1.20.1640.10 10 501 0.0 T 12-10-2018 M634_06740 02835a463225f44b4b84e13a9ea1a1c3 1037 SUPERFAMILY SSF82693 40 134 7.06E-25 T 12-10-2018 M634_06740 02835a463225f44b4b84e13a9ea1a1c3 1037 SUPERFAMILY SSF82693 554 657 2.88E-17 T 12-10-2018 M634_06740 02835a463225f44b4b84e13a9ea1a1c3 1037 SUPERFAMILY SSF82714 704 788 2.22E-17 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_06740 02835a463225f44b4b84e13a9ea1a1c3 1037 SUPERFAMILY SSF82866 794 1009 3.01E-49 T 12-10-2018 M634_06740 02835a463225f44b4b84e13a9ea1a1c3 1037 SUPERFAMILY SSF82693 139 324 9.16E-18 T 12-10-2018 M634_06740 02835a463225f44b4b84e13a9ea1a1c3 1037 Gene3D G3DSA:3.30.2090.10 703 791 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_19200 d2e0686c43a49b9086327037efce5fdb 337 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 175 334 7.8E-42 T 12-10-2018 IPR000160 GGDEF domain M634_19200 d2e0686c43a49b9086327037efce5fdb 337 Gene3D G3DSA:3.30.70.270 164 336 3.8E-50 T 12-10-2018 M634_19200 d2e0686c43a49b9086327037efce5fdb 337 SUPERFAMILY SSF55073 183 335 1.73E-43 T 12-10-2018 IPR029787 Nucleotide cyclase M634_19200 d2e0686c43a49b9086327037efce5fdb 337 Pfam PF00990 Diguanylate cyclase, GGDEF domain 178 333 6.3E-41 T 12-10-2018 IPR000160 GGDEF domain M634_19200 d2e0686c43a49b9086327037efce5fdb 337 SMART SM00267 167 337 3.1E-48 T 12-10-2018 IPR000160 GGDEF domain M634_14825 a8ebc37df3bd85bd188382dc0926294f 639 Gene3D G3DSA:3.20.20.80 259 636 8.2E-136 T 12-10-2018 M634_14825 a8ebc37df3bd85bd188382dc0926294f 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 283 304 7.7E-50 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 M634_14825 a8ebc37df3bd85bd188382dc0926294f 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 402 420 7.7E-50 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 M634_14825 a8ebc37df3bd85bd188382dc0926294f 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 217 237 7.7E-50 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 M634_14825 a8ebc37df3bd85bd188382dc0926294f 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 254 271 7.7E-50 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 M634_14825 a8ebc37df3bd85bd188382dc0926294f 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 353 370 7.7E-50 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 M634_14825 a8ebc37df3bd85bd188382dc0926294f 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 424 437 7.7E-50 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 M634_14825 a8ebc37df3bd85bd188382dc0926294f 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 589 606 7.7E-50 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 M634_14825 a8ebc37df3bd85bd188382dc0926294f 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 571 587 7.7E-50 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 M634_14825 a8ebc37df3bd85bd188382dc0926294f 639 Gene3D G3DSA:3.30.379.10 132 258 1.4E-19 T 12-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 M634_14825 a8ebc37df3bd85bd188382dc0926294f 639 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 139 256 9.4E-14 T 12-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal M634_14825 a8ebc37df3bd85bd188382dc0926294f 639 SUPERFAMILY SSF55545 125 259 3.29E-25 T 12-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 M634_14825 a8ebc37df3bd85bd188382dc0926294f 639 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 260 607 7.6E-120 T 12-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 M634_14825 a8ebc37df3bd85bd188382dc0926294f 639 SUPERFAMILY SSF51445 260 620 5.48E-129 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M634_08815 59adcbc074721c57adf284e0155199b6 211 Gene3D G3DSA:1.25.40.10 17 190 2.0E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_08815 59adcbc074721c57adf284e0155199b6 211 SUPERFAMILY SSF48452 50 181 9.48E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_08815 59adcbc074721c57adf284e0155199b6 211 Pfam PF13181 Tetratricopeptide repeat 137 155 0.065 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_10490 c15ad570bfc752ef6ebd0297305ef8e7 286 SUPERFAMILY SSF111369 38 247 1.7E-26 T 12-10-2018 M634_10490 c15ad570bfc752ef6ebd0297305ef8e7 286 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 40 228 8.5E-15 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M634_10490 c15ad570bfc752ef6ebd0297305ef8e7 286 Gene3D G3DSA:2.40.50.100 40 112 1.8E-11 T 12-10-2018 M634_10490 c15ad570bfc752ef6ebd0297305ef8e7 286 Gene3D G3DSA:2.40.30.170 168 286 1.9E-28 T 12-10-2018 M634_10490 c15ad570bfc752ef6ebd0297305ef8e7 286 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 228 5.0E-32 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 M634_16340 506d7f2791ccb74f067c1d628a4b5727 205 Gene3D G3DSA:3.30.1050.10 78 205 1.0E-43 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily M634_16340 506d7f2791ccb74f067c1d628a4b5727 205 Gene3D G3DSA:1.25.40.880 1 75 2.1E-26 T 12-10-2018 IPR038536 Alkyl/aryl-sulfatase, dimerisation domain superfamily M634_16340 506d7f2791ccb74f067c1d628a4b5727 205 SUPERFAMILY SSF55718 84 205 1.04E-35 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily M634_16340 506d7f2791ccb74f067c1d628a4b5727 205 Pfam PF14864 Alkyl sulfatase C-terminal 83 205 2.5E-37 T 12-10-2018 IPR029229 Alkyl sulfatase, C-terminal M634_16340 506d7f2791ccb74f067c1d628a4b5727 205 Pfam PF14863 Alkyl sulfatase dimerisation 1 74 4.0E-24 T 12-10-2018 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 M634_16340 506d7f2791ccb74f067c1d628a4b5727 205 SUPERFAMILY SSF56281 1 76 3.97E-22 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M634_14485 b1d8cdeef29bea2ab0827209c9f2eb28 162 Pfam PF01478 Type IV leader peptidase family 5 107 5.9E-17 T 12-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 M634_14485 b1d8cdeef29bea2ab0827209c9f2eb28 162 Gene3D G3DSA:1.20.120.1220 1 147 7.5E-9 T 12-10-2018 M634_03780 90eef0cfb91dc2f6f826653efb57fb05 461 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 7 448 5.6E-117 T 12-10-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 M634_03780 90eef0cfb91dc2f6f826653efb57fb05 461 SUPERFAMILY SSF47384 214 295 4.32E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M634_03780 90eef0cfb91dc2f6f826653efb57fb05 461 SUPERFAMILY SSF55874 285 449 2.1E-32 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_03780 90eef0cfb91dc2f6f826653efb57fb05 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 448 2.1E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_03780 90eef0cfb91dc2f6f826653efb57fb05 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 430 2.1E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_03780 90eef0cfb91dc2f6f826653efb57fb05 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 390 2.1E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_03780 90eef0cfb91dc2f6f826653efb57fb05 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 404 2.1E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_03780 90eef0cfb91dc2f6f826653efb57fb05 461 SMART SM00388 230 296 4.5E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_03780 90eef0cfb91dc2f6f826653efb57fb05 461 SMART SM00304 176 229 2.0E-4 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_03780 90eef0cfb91dc2f6f826653efb57fb05 461 SMART SM00387 339 451 4.8E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_03780 90eef0cfb91dc2f6f826653efb57fb05 461 Gene3D G3DSA:1.10.287.130 180 298 7.2E-20 T 12-10-2018 M634_03780 90eef0cfb91dc2f6f826653efb57fb05 461 Gene3D G3DSA:3.30.565.10 299 452 3.3E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_03780 90eef0cfb91dc2f6f826653efb57fb05 461 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 448 9.2E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_03780 90eef0cfb91dc2f6f826653efb57fb05 461 Pfam PF00512 His Kinase A (phospho-acceptor) domain 231 295 1.1E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_09995 5387d6cdbc29413a1678abd8d2d7c310 394 Gene3D G3DSA:3.40.50.2000 19 363 9.1E-61 T 12-10-2018 M634_09995 5387d6cdbc29413a1678abd8d2d7c310 394 Pfam PF00534 Glycosyl transferases group 1 184 347 1.8E-30 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 M634_09995 5387d6cdbc29413a1678abd8d2d7c310 394 Pfam PF13439 Glycosyltransferase Family 4 18 175 1.2E-15 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 M634_09995 5387d6cdbc29413a1678abd8d2d7c310 394 Gene3D G3DSA:3.40.50.2000 172 353 9.1E-61 T 12-10-2018 M634_09995 5387d6cdbc29413a1678abd8d2d7c310 394 SUPERFAMILY SSF53756 7 370 4.93E-68 T 12-10-2018 M634_23575 e29d64f87e5ecdf43496f54b7f90149a 244 Gene3D G3DSA:1.10.10.10 9 79 1.5E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_23575 e29d64f87e5ecdf43496f54b7f90149a 244 Pfam PF01614 Bacterial transcriptional regulator 130 238 9.9E-15 T 12-10-2018 IPR014757 Transcription regulator IclR, C-terminal M634_23575 e29d64f87e5ecdf43496f54b7f90149a 244 Pfam PF08279 HTH domain 16 56 4.6E-5 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 M634_23575 e29d64f87e5ecdf43496f54b7f90149a 244 Gene3D G3DSA:3.30.450.40 80 240 8.1E-60 T 12-10-2018 IPR029016 GAF-like domain superfamily M634_23575 e29d64f87e5ecdf43496f54b7f90149a 244 SUPERFAMILY SSF55781 87 240 1.9E-32 T 12-10-2018 M634_23575 e29d64f87e5ecdf43496f54b7f90149a 244 SUPERFAMILY SSF46785 11 77 1.87E-8 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_06010 bdb1d7b7e466aa4fea049f5df8ceb888 305 Gene3D G3DSA:3.30.479.30 50 182 3.0E-42 T 12-10-2018 M634_06010 bdb1d7b7e466aa4fea049f5df8ceb888 305 Pfam PF01145 SPFH domain / Band 7 family 26 195 4.9E-34 T 12-10-2018 IPR001107 Band 7 domain M634_06010 bdb1d7b7e466aa4fea049f5df8ceb888 305 SMART SM00244 22 180 1.9E-58 T 12-10-2018 IPR001107 Band 7 domain M634_06010 bdb1d7b7e466aa4fea049f5df8ceb888 305 PRINTS PR00721 Stomatin signature 77 98 3.5E-28 T 12-10-2018 IPR001972 Stomatin family GO:0016020 M634_06010 bdb1d7b7e466aa4fea049f5df8ceb888 305 PRINTS PR00721 Stomatin signature 132 155 3.5E-28 T 12-10-2018 IPR001972 Stomatin family GO:0016020 M634_06010 bdb1d7b7e466aa4fea049f5df8ceb888 305 PRINTS PR00721 Stomatin signature 156 174 3.5E-28 T 12-10-2018 IPR001972 Stomatin family GO:0016020 M634_06010 bdb1d7b7e466aa4fea049f5df8ceb888 305 PRINTS PR00721 Stomatin signature 112 129 3.5E-28 T 12-10-2018 IPR001972 Stomatin family GO:0016020 M634_06010 bdb1d7b7e466aa4fea049f5df8ceb888 305 PRINTS PR00721 Stomatin signature 175 196 3.5E-28 T 12-10-2018 IPR001972 Stomatin family GO:0016020 M634_06010 bdb1d7b7e466aa4fea049f5df8ceb888 305 SUPERFAMILY SSF117892 53 187 1.7E-40 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily M634_06010 bdb1d7b7e466aa4fea049f5df8ceb888 305 ProSitePatterns PS01270 Band 7 protein family signature. 136 164 - T 12-10-2018 IPR018080 Band 7/stomatin-like, conserved site M634_06010 bdb1d7b7e466aa4fea049f5df8ceb888 305 Pfam PF16200 C-terminal region of band_7 242 303 1.9E-7 T 12-10-2018 IPR032435 Band 7, C-terminal extension Reactome: R-HSA-8949664 M634_14080 6958fd3a14866281cb3a04803bf68501 848 ProSitePatterns PS01095 Chitinases family 18 active site. 639 647 - T 12-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 M634_14080 6958fd3a14866281cb3a04803bf68501 848 Gene3D G3DSA:3.20.20.80 524 844 9.9E-77 T 12-10-2018 M634_14080 6958fd3a14866281cb3a04803bf68501 848 SUPERFAMILY SSF51055 17 78 1.96E-13 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M634_14080 6958fd3a14866281cb3a04803bf68501 848 Gene3D G3DSA:2.10.10.20 11 79 2.1E-11 T 12-10-2018 M634_14080 6958fd3a14866281cb3a04803bf68501 848 SUPERFAMILY SSF51445 524 835 3.99E-48 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M634_14080 6958fd3a14866281cb3a04803bf68501 848 Gene3D G3DSA:2.60.40.10 431 523 4.7E-21 T 12-10-2018 IPR013783 Immunoglobulin-like fold M634_14080 6958fd3a14866281cb3a04803bf68501 848 Gene3D G3DSA:2.60.40.10 337 429 9.9E-23 T 12-10-2018 IPR013783 Immunoglobulin-like fold M634_14080 6958fd3a14866281cb3a04803bf68501 848 Gene3D G3DSA:2.60.40.10 85 175 5.0E-20 T 12-10-2018 IPR013783 Immunoglobulin-like fold M634_14080 6958fd3a14866281cb3a04803bf68501 848 Gene3D G3DSA:2.60.40.10 179 273 1.7E-22 T 12-10-2018 IPR013783 Immunoglobulin-like fold M634_14080 6958fd3a14866281cb3a04803bf68501 848 Pfam PF00704 Glycosyl hydrolases family 18 527 827 3.5E-24 T 12-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 M634_14080 6958fd3a14866281cb3a04803bf68501 848 SMART SM00495 28 74 1.4E-10 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M634_14080 6958fd3a14866281cb3a04803bf68501 848 SMART SM00495 279 328 0.01 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M634_14080 6958fd3a14866281cb3a04803bf68501 848 SMART SM00636 525 827 3.7E-4 T 12-10-2018 IPR011583 Chitinase II GO:0008061 M634_01380 0cec08e67a93f1265286016a564de0e8 407 Gene3D G3DSA:3.20.20.450 59 196 2.5E-17 T 12-10-2018 IPR035919 EAL domain superfamily M634_01380 0cec08e67a93f1265286016a564de0e8 407 SMART SM00052 2 199 4.3E-4 T 12-10-2018 IPR001633 EAL domain M634_01380 0cec08e67a93f1265286016a564de0e8 407 Pfam PF08668 HDOD domain 208 324 5.6E-13 T 12-10-2018 IPR013976 Metal-dependent hydrolase HDOD M634_01380 0cec08e67a93f1265286016a564de0e8 407 Gene3D G3DSA:1.10.3210.10 197 406 1.5E-22 T 12-10-2018 M634_01380 0cec08e67a93f1265286016a564de0e8 407 SUPERFAMILY SSF109604 185 403 6.28E-41 T 12-10-2018 M634_01380 0cec08e67a93f1265286016a564de0e8 407 PIRSF PIRSF003180 1 407 2.1E-174 T 12-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing M634_01380 0cec08e67a93f1265286016a564de0e8 407 Pfam PF00563 EAL domain 68 194 4.4E-14 T 12-10-2018 IPR001633 EAL domain M634_01380 0cec08e67a93f1265286016a564de0e8 407 SUPERFAMILY SSF141868 4 197 6.02E-28 T 12-10-2018 IPR035919 EAL domain superfamily M634_08450 fa0e6a6e10293e517991025a989ddc70 599 Gene3D G3DSA:1.10.1370.20 219 599 9.2E-107 T 12-10-2018 M634_08450 fa0e6a6e10293e517991025a989ddc70 599 Gene3D G3DSA:1.20.140.70 20 170 2.1E-12 T 12-10-2018 M634_08450 fa0e6a6e10293e517991025a989ddc70 599 SUPERFAMILY SSF55486 4 582 4.07E-95 T 12-10-2018 M634_08450 fa0e6a6e10293e517991025a989ddc70 599 Pfam PF08439 Oligopeptidase F 106 174 1.9E-12 T 12-10-2018 IPR013647 Oligopeptidase F, N-terminal domain M634_08450 fa0e6a6e10293e517991025a989ddc70 599 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 5 593 1.5E-201 T 12-10-2018 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 M634_08450 fa0e6a6e10293e517991025a989ddc70 599 Pfam PF01432 Peptidase family M3 337 580 1.9E-22 T 12-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 M634_20370 b3ef0e6cb7e8b46586354fe993a681de 478 SUPERFAMILY SSF46785 20 87 5.15E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_20370 b3ef0e6cb7e8b46586354fe993a681de 478 Gene3D G3DSA:3.40.640.10 109 471 6.0E-101 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_20370 b3ef0e6cb7e8b46586354fe993a681de 478 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 60 76 1.8E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_20370 b3ef0e6cb7e8b46586354fe993a681de 478 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 60 1.8E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_20370 b3ef0e6cb7e8b46586354fe993a681de 478 Pfam PF00155 Aminotransferase class I and II 143 439 7.9E-22 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 M634_20370 b3ef0e6cb7e8b46586354fe993a681de 478 Gene3D G3DSA:1.10.10.10 20 87 1.0E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_20370 b3ef0e6cb7e8b46586354fe993a681de 478 SMART SM00345 27 86 2.4E-17 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_20370 b3ef0e6cb7e8b46586354fe993a681de 478 Pfam PF00392 Bacterial regulatory proteins, gntR family 25 86 1.7E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_20370 b3ef0e6cb7e8b46586354fe993a681de 478 SUPERFAMILY SSF53383 116 476 4.43E-75 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_13630 78c416f069d4360c702facd26e043609 439 SMART SM00382 158 342 4.8E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_13630 78c416f069d4360c702facd26e043609 439 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 24 435 3.9E-194 T 12-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M634_13630 78c416f069d4360c702facd26e043609 439 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 21 437 2.3E-174 T 12-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M634_13630 78c416f069d4360c702facd26e043609 439 Gene3D G3DSA:3.40.50.12240 17 439 2.0E-156 T 12-10-2018 M634_13630 78c416f069d4360c702facd26e043609 439 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 348 357 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M634_13630 78c416f069d4360c702facd26e043609 439 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 146 357 3.5E-73 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M634_13630 78c416f069d4360c702facd26e043609 439 SUPERFAMILY SSF52540 93 362 5.04E-96 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_20110 b5e3f31d47b7b0ee970e7aacf67b2098 289 Pfam PF06445 GyrI-like small molecule binding domain 138 286 6.1E-28 T 12-10-2018 IPR029442 GyrI-like small molecule binding domain M634_20110 b5e3f31d47b7b0ee970e7aacf67b2098 289 SUPERFAMILY SSF55136 138 286 5.76E-26 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily M634_20110 b5e3f31d47b7b0ee970e7aacf67b2098 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 60 103 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 M634_20110 b5e3f31d47b7b0ee970e7aacf67b2098 289 SMART SM00342 23 107 7.8E-31 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_20110 b5e3f31d47b7b0ee970e7aacf67b2098 289 SUPERFAMILY SSF46689 60 110 1.88E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_20110 b5e3f31d47b7b0ee970e7aacf67b2098 289 SMART SM00871 137 287 4.1E-18 T 12-10-2018 IPR010499 Bacterial transcription activator, effector binding M634_20110 b5e3f31d47b7b0ee970e7aacf67b2098 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 76 91 5.7E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M634_20110 b5e3f31d47b7b0ee970e7aacf67b2098 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 91 107 5.7E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M634_20110 b5e3f31d47b7b0ee970e7aacf67b2098 289 Gene3D G3DSA:3.20.80.10 138 287 3.7E-27 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily M634_20110 b5e3f31d47b7b0ee970e7aacf67b2098 289 Gene3D G3DSA:1.10.10.60 57 112 4.7E-17 T 12-10-2018 M634_20110 b5e3f31d47b7b0ee970e7aacf67b2098 289 Gene3D G3DSA:1.10.10.60 1 56 3.5E-16 T 12-10-2018 M634_20110 b5e3f31d47b7b0ee970e7aacf67b2098 289 Pfam PF12833 Helix-turn-helix domain 29 108 9.9E-26 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_20110 b5e3f31d47b7b0ee970e7aacf67b2098 289 SUPERFAMILY SSF46689 7 57 2.64E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_13145 290a910196934a64472fe8fd628191a1 296 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 6 199 6.7E-49 T 12-10-2018 IPR009228 Capsid scaffolding protein GpO GO:0019069 M634_22375 ff8688e96e7e48876c6769edd55b28b0 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 322 4.1E-62 T 12-10-2018 IPR016040 NAD(P)-binding domain M634_22375 ff8688e96e7e48876c6769edd55b28b0 338 SUPERFAMILY SSF51735 1 335 2.26E-100 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_22375 ff8688e96e7e48876c6769edd55b28b0 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 334 6.8E-142 T 12-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 M634_22375 ff8688e96e7e48876c6769edd55b28b0 338 Gene3D G3DSA:3.90.25.10 193 328 4.8E-142 T 12-10-2018 M634_22375 ff8688e96e7e48876c6769edd55b28b0 338 Gene3D G3DSA:3.40.50.720 3 273 4.8E-142 T 12-10-2018 M634_22375 ff8688e96e7e48876c6769edd55b28b0 338 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 1.5E-5 T 12-10-2018 M634_22375 ff8688e96e7e48876c6769edd55b28b0 338 PRINTS PR01713 Nucleotide sugar epimerase signature 230 245 1.5E-5 T 12-10-2018 M634_22375 ff8688e96e7e48876c6769edd55b28b0 338 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 1.5E-5 T 12-10-2018 M634_17420 c2318ebe74106d645ebb66450f5a5eb4 290 Gene3D G3DSA:3.40.1090.10 86 227 2.5E-7 T 12-10-2018 M634_17420 c2318ebe74106d645ebb66450f5a5eb4 290 Gene3D G3DSA:3.40.1090.10 2 85 7.1E-10 T 12-10-2018 M634_17420 c2318ebe74106d645ebb66450f5a5eb4 290 Pfam PF01734 Patatin-like phospholipase 7 170 3.0E-14 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 M634_17420 c2318ebe74106d645ebb66450f5a5eb4 290 SUPERFAMILY SSF52151 4 229 2.35E-33 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase M634_16895 ff292085a30e3add6b36efec97872c21 256 Gene3D G3DSA:3.30.70.20 138 223 3.8E-10 T 12-10-2018 M634_16895 ff292085a30e3add6b36efec97872c21 256 Pfam PF12800 4Fe-4S binding domain 141 159 0.027 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M634_16895 ff292085a30e3add6b36efec97872c21 256 Pfam PF12800 4Fe-4S binding domain 188 200 0.81 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M634_16895 ff292085a30e3add6b36efec97872c21 256 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 65 76 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M634_16895 ff292085a30e3add6b36efec97872c21 256 Pfam PF12838 4Fe-4S dicluster domain 64 119 9.8E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M634_16895 ff292085a30e3add6b36efec97872c21 256 TIGRFAM TIGR00397 mauM_napG: MauM/NapG family ferredoxin-type protein 11 221 7.4E-78 T 12-10-2018 IPR004494 MauM/NapG ferredoxin-type protein M634_16895 ff292085a30e3add6b36efec97872c21 256 Gene3D G3DSA:3.30.70.20 60 136 6.3E-10 T 12-10-2018 M634_16895 ff292085a30e3add6b36efec97872c21 256 SUPERFAMILY SSF54862 63 209 3.24E-24 T 12-10-2018 M634_16895 ff292085a30e3add6b36efec97872c21 256 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 11 42 9.4E-4 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal M634_03865 5bd60a7cdefe652f17ec204d0f3392b5 431 Pfam PF00589 Phage integrase family 228 388 3.3E-10 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 M634_03865 5bd60a7cdefe652f17ec204d0f3392b5 431 Gene3D G3DSA:3.30.160.390 1 108 1.7E-14 T 12-10-2018 IPR038488 Integrase, DNA-binding domain superfamily M634_03865 5bd60a7cdefe652f17ec204d0f3392b5 431 Gene3D G3DSA:1.10.150.130 109 219 2.0E-12 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal M634_03865 5bd60a7cdefe652f17ec204d0f3392b5 431 Pfam PF13356 Arm DNA-binding domain 4 90 1.5E-11 T 12-10-2018 IPR025166 Integrase, DNA-binding domain M634_03865 5bd60a7cdefe652f17ec204d0f3392b5 431 Gene3D G3DSA:1.10.443.10 227 417 5.7E-15 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 M634_03865 5bd60a7cdefe652f17ec204d0f3392b5 431 SUPERFAMILY SSF56349 114 410 4.71E-44 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 M634_02395 e04a35eba2121bea6ecf9f4ecca46b6f 397 Pfam PF03486 HI0933-like protein 5 395 3.5E-157 T 12-10-2018 M634_02395 e04a35eba2121bea6ecf9f4ecca46b6f 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 365 372 1.0E-8 T 12-10-2018 M634_02395 e04a35eba2121bea6ecf9f4ecca46b6f 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 158 167 1.0E-8 T 12-10-2018 M634_02395 e04a35eba2121bea6ecf9f4ecca46b6f 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.0E-8 T 12-10-2018 M634_02395 e04a35eba2121bea6ecf9f4ecca46b6f 397 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 395 6.0E-129 T 12-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like M634_02395 e04a35eba2121bea6ecf9f4ecca46b6f 397 Gene3D G3DSA:1.10.8.260 265 325 7.0E-130 T 12-10-2018 IPR023166 HI0933-like insert domain superfamily M634_02395 e04a35eba2121bea6ecf9f4ecca46b6f 397 Gene3D G3DSA:2.40.30.10 191 342 7.0E-130 T 12-10-2018 M634_02395 e04a35eba2121bea6ecf9f4ecca46b6f 397 Gene3D G3DSA:3.50.50.60 8 391 7.0E-130 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_02395 e04a35eba2121bea6ecf9f4ecca46b6f 397 SUPERFAMILY SSF51905 1 397 4.52E-59 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_02395 e04a35eba2121bea6ecf9f4ecca46b6f 397 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 2.2E-5 T 12-10-2018 M634_02395 e04a35eba2121bea6ecf9f4ecca46b6f 397 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 350 372 2.2E-5 T 12-10-2018 M634_02395 e04a35eba2121bea6ecf9f4ecca46b6f 397 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.2E-5 T 12-10-2018 M634_02395 e04a35eba2121bea6ecf9f4ecca46b6f 397 SUPERFAMILY SSF160996 193 341 4.32E-41 T 12-10-2018 M634_20045 53b74b6269f2778e65e53a5f01dae51c 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 M634_20045 53b74b6269f2778e65e53a5f01dae51c 253 SUPERFAMILY SSF51735 5 244 1.89E-63 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_20045 53b74b6269f2778e65e53a5f01dae51c 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 244 1.7E-51 T 12-10-2018 M634_20045 53b74b6269f2778e65e53a5f01dae51c 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.2E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20045 53b74b6269f2778e65e53a5f01dae51c 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.2E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20045 53b74b6269f2778e65e53a5f01dae51c 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.2E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20045 53b74b6269f2778e65e53a5f01dae51c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 1.8E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20045 53b74b6269f2778e65e53a5f01dae51c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.8E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20045 53b74b6269f2778e65e53a5f01dae51c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.8E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20045 53b74b6269f2778e65e53a5f01dae51c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.8E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20045 53b74b6269f2778e65e53a5f01dae51c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.8E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20045 53b74b6269f2778e65e53a5f01dae51c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.8E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20045 53b74b6269f2778e65e53a5f01dae51c 253 Gene3D G3DSA:3.40.50.720 4 245 1.2E-66 T 12-10-2018 M634_12030 23f8767abcf7fa92be0cb3fcbddebd70 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 12-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 M634_12030 23f8767abcf7fa92be0cb3fcbddebd70 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 1.2E-101 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 M634_12030 23f8767abcf7fa92be0cb3fcbddebd70 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 38.312 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 M634_12030 23f8767abcf7fa92be0cb3fcbddebd70 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 1.1E-102 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 M634_12030 23f8767abcf7fa92be0cb3fcbddebd70 268 SUPERFAMILY SSF51366 1 266 2.92E-92 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 M634_12030 23f8767abcf7fa92be0cb3fcbddebd70 268 Gene3D G3DSA:3.20.20.70 1 268 1.2E-95 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_01880 d732107dd41fb44e867f74c1060d4dde 211 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 16 205 28.571 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 M634_01880 d732107dd41fb44e867f74c1060d4dde 211 Pfam PF02527 rRNA small subunit methyltransferase G 23 204 4.5E-63 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 M634_01880 d732107dd41fb44e867f74c1060d4dde 211 PIRSF PIRSF003078 2 211 2.5E-58 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 M634_01880 d732107dd41fb44e867f74c1060d4dde 211 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 29 207 3.3E-57 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 M634_01880 d732107dd41fb44e867f74c1060d4dde 211 SUPERFAMILY SSF53335 8 209 3.38E-40 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_01880 d732107dd41fb44e867f74c1060d4dde 211 Gene3D G3DSA:3.40.50.150 4 210 1.9E-67 T 12-10-2018 M634_06795 445cbe958061cc3a93784b51ea2ee801 667 Gene3D G3DSA:3.40.190.10 44 101 6.6E-19 T 12-10-2018 M634_06795 445cbe958061cc3a93784b51ea2ee801 667 Gene3D G3DSA:3.40.190.10 250 460 5.4E-21 T 12-10-2018 M634_06795 445cbe958061cc3a93784b51ea2ee801 667 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 45 194 2.6E-16 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M634_06795 445cbe958061cc3a93784b51ea2ee801 667 Pfam PF00990 Diguanylate cyclase, GGDEF domain 512 655 4.0E-26 T 12-10-2018 IPR000160 GGDEF domain M634_06795 445cbe958061cc3a93784b51ea2ee801 667 Gene3D G3DSA:3.30.70.270 504 658 3.0E-31 T 12-10-2018 M634_06795 445cbe958061cc3a93784b51ea2ee801 667 SUPERFAMILY SSF55073 516 656 4.87E-27 T 12-10-2018 IPR029787 Nucleotide cyclase M634_06795 445cbe958061cc3a93784b51ea2ee801 667 Gene3D G3DSA:3.40.190.10 102 177 6.6E-19 T 12-10-2018 M634_06795 445cbe958061cc3a93784b51ea2ee801 667 Gene3D G3DSA:3.40.190.10 336 433 5.4E-21 T 12-10-2018 M634_06795 445cbe958061cc3a93784b51ea2ee801 667 SMART SM00267 500 660 3.1E-21 T 12-10-2018 IPR000160 GGDEF domain M634_06795 445cbe958061cc3a93784b51ea2ee801 667 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 509 656 7.3E-28 T 12-10-2018 IPR000160 GGDEF domain M634_06795 445cbe958061cc3a93784b51ea2ee801 667 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 257 458 1.2E-19 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M634_06795 445cbe958061cc3a93784b51ea2ee801 667 SMART SM00062 29 227 2.4E-4 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M634_06795 445cbe958061cc3a93784b51ea2ee801 667 SUPERFAMILY SSF53850 250 460 1.02E-26 T 12-10-2018 M634_06795 445cbe958061cc3a93784b51ea2ee801 667 SUPERFAMILY SSF53850 44 200 2.18E-22 T 12-10-2018 M634_04350 5a1d8f288f45c860a2d9f72c5e30b43a 160 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 2.6E-69 T 12-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 M634_04350 5a1d8f288f45c860a2d9f72c5e30b43a 160 Gene3D G3DSA:3.50.30.40 1 160 2.4E-64 T 12-10-2018 M634_04350 5a1d8f288f45c860a2d9f72c5e30b43a 160 SUPERFAMILY SSF89562 1 158 1.12E-47 T 12-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily M634_04350 5a1d8f288f45c860a2d9f72c5e30b43a 160 Pfam PF03737 Aldolase/RraA 5 152 3.9E-41 T 12-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein M634_06400 ca80f34bafd823a1039694b7ed7bea5d 286 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 38.077 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 M634_06400 ca80f34bafd823a1039694b7ed7bea5d 286 SUPERFAMILY SSF53223 1 122 5.08E-40 T 12-10-2018 M634_06400 ca80f34bafd823a1039694b7ed7bea5d 286 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 2.0E-69 T 12-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 M634_06400 ca80f34bafd823a1039694b7ed7bea5d 286 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 121 7.7E-39 T 12-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 M634_06400 ca80f34bafd823a1039694b7ed7bea5d 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 3.1E-89 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 M634_06400 ca80f34bafd823a1039694b7ed7bea5d 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 3.1E-89 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 M634_06400 ca80f34bafd823a1039694b7ed7bea5d 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 3.1E-89 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 M634_06400 ca80f34bafd823a1039694b7ed7bea5d 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 3.1E-89 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 M634_06400 ca80f34bafd823a1039694b7ed7bea5d 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 3.1E-89 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 M634_06400 ca80f34bafd823a1039694b7ed7bea5d 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 3.1E-89 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 M634_06400 ca80f34bafd823a1039694b7ed7bea5d 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 3.1E-89 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 M634_06400 ca80f34bafd823a1039694b7ed7bea5d 286 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 12-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 M634_06400 ca80f34bafd823a1039694b7ed7bea5d 286 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 12-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 M634_06400 ca80f34bafd823a1039694b7ed7bea5d 286 SUPERFAMILY SSF51735 123 280 4.63E-52 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_06400 ca80f34bafd823a1039694b7ed7bea5d 286 Gene3D G3DSA:3.40.50.10860 8 276 2.3E-108 T 12-10-2018 M634_06400 ca80f34bafd823a1039694b7ed7bea5d 286 Gene3D G3DSA:3.40.50.720 6 259 2.3E-108 T 12-10-2018 M634_13510 f7332c65e93f804812213a53266fc30b 222 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 8 218 8.0E-92 T 12-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria M634_13510 f7332c65e93f804812213a53266fc30b 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 29 50 5.2E-70 T 12-10-2018 M634_13510 f7332c65e93f804812213a53266fc30b 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 103 121 5.2E-70 T 12-10-2018 M634_13510 f7332c65e93f804812213a53266fc30b 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 78 101 5.2E-70 T 12-10-2018 M634_13510 f7332c65e93f804812213a53266fc30b 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 158 177 5.2E-70 T 12-10-2018 M634_13510 f7332c65e93f804812213a53266fc30b 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 55 72 5.2E-70 T 12-10-2018 M634_13510 f7332c65e93f804812213a53266fc30b 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 195 218 5.2E-70 T 12-10-2018 M634_13510 f7332c65e93f804812213a53266fc30b 222 Pfam PF03379 CcmB protein 5 219 8.0E-90 T 12-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 M634_13510 f7332c65e93f804812213a53266fc30b 222 PIRSF PIRSF002764 1 222 5.4E-83 T 12-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria M634_18405 1b90d724894404c3616c89f504848766 131 Gene3D G3DSA:2.170.150.70 15 131 3.8E-37 T 12-10-2018 M634_18405 1b90d724894404c3616c89f504848766 131 SUPERFAMILY SSF51316 13 130 1.36E-30 T 12-10-2018 IPR011057 Mss4-like superfamily M634_18405 1b90d724894404c3616c89f504848766 131 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 38 114 2.9E-9 T 12-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 M634_24590 76ab7a8edaa23db928c51cc841ad91b7 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 255 1.6E-23 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_24590 76ab7a8edaa23db928c51cc841ad91b7 266 SUPERFAMILY SSF161098 56 247 2.88E-22 T 12-10-2018 IPR035906 MetI-like superfamily M634_24590 76ab7a8edaa23db928c51cc841ad91b7 266 Gene3D G3DSA:1.10.3720.10 51 253 2.3E-20 T 12-10-2018 IPR035906 MetI-like superfamily M634_12040 730f2f0260a9c423349998fef78f29bd 513 Pfam PF00501 AMP-binding enzyme 8 416 1.3E-114 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 M634_12040 730f2f0260a9c423349998fef78f29bd 513 ProSitePatterns PS00455 Putative AMP-binding domain signature. 173 184 - T 12-10-2018 IPR020845 AMP-binding, conserved site M634_12040 730f2f0260a9c423349998fef78f29bd 513 Gene3D G3DSA:3.40.50.12780 1 409 4.2E-127 T 12-10-2018 M634_12040 730f2f0260a9c423349998fef78f29bd 513 Gene3D G3DSA:3.30.300.310 412 512 8.8E-31 T 12-10-2018 M634_12040 730f2f0260a9c423349998fef78f29bd 513 SUPERFAMILY SSF56801 4 509 7.06E-161 T 12-10-2018 M634_12040 730f2f0260a9c423349998fef78f29bd 513 Pfam PF13193 AMP-binding enzyme C-terminal domain 425 500 4.3E-18 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain M634_18700 e75f58843c0d5fea6e04674f106a9a72 815 Gene3D G3DSA:3.90.55.10 83 617 8.6E-220 T 12-10-2018 M634_18700 e75f58843c0d5fea6e04674f106a9a72 815 SUPERFAMILY SSF53706 47 667 7.46E-165 T 12-10-2018 M634_18700 e75f58843c0d5fea6e04674f106a9a72 815 SUPERFAMILY SSF50692 670 813 2.03E-42 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily M634_18700 e75f58843c0d5fea6e04674f106a9a72 815 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 43 813 0.0 T 12-10-2018 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 M634_18700 e75f58843c0d5fea6e04674f106a9a72 815 Gene3D G3DSA:3.40.50.740 86 566 8.6E-220 T 12-10-2018 M634_18700 e75f58843c0d5fea6e04674f106a9a72 815 Pfam PF01568 Molydopterin dinucleotide binding domain 675 791 1.7E-26 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 M634_18700 e75f58843c0d5fea6e04674f106a9a72 815 Gene3D G3DSA:3.40.228.10 178 643 8.6E-220 T 12-10-2018 M634_18700 e75f58843c0d5fea6e04674f106a9a72 815 Gene3D G3DSA:2.40.40.20 651 809 9.3E-47 T 12-10-2018 M634_18700 e75f58843c0d5fea6e04674f106a9a72 815 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 498 515 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 M634_18700 e75f58843c0d5fea6e04674f106a9a72 815 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 5 27 2.3E-5 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal M634_18700 e75f58843c0d5fea6e04674f106a9a72 815 Pfam PF00384 Molybdopterin oxidoreductase 86 555 2.1E-104 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M634_22970 18d4d5ae42d4506bb8dcba0b391164ec 553 Gene3D G3DSA:3.40.50.300 8 228 4.8E-60 T 12-10-2018 M634_22970 18d4d5ae42d4506bb8dcba0b391164ec 553 Gene3D G3DSA:1.10.8.300 229 301 1.9E-25 T 12-10-2018 M634_22970 18d4d5ae42d4506bb8dcba0b391164ec 553 Pfam PF12592 Protein of unknown function (DUF3763) 483 535 1.3E-19 T 12-10-2018 IPR022547 ATPase, RavA, C-terminal GO:0042626 M634_22970 18d4d5ae42d4506bb8dcba0b391164ec 553 SUPERFAMILY SSF52540 18 294 1.01E-20 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_22970 18d4d5ae42d4506bb8dcba0b391164ec 553 SMART SM00382 46 189 1.1E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_22970 18d4d5ae42d4506bb8dcba0b391164ec 553 Pfam PF07728 AAA domain (dynein-related subfamily) 49 179 1.9E-22 T 12-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 M634_06120 f419684a23164143e051dfd867b507fa 634 SUPERFAMILY SSF54211 238 493 1.06E-99 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M634_06120 f419684a23164143e051dfd867b507fa 634 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 30 39 - T 12-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 M634_06120 f419684a23164143e051dfd867b507fa 634 Gene3D G3DSA:3.30.230.80 237 409 1.1E-70 T 12-10-2018 M634_06120 f419684a23164143e051dfd867b507fa 634 PRINTS PR00775 90kDa heat shock protein signature 177 194 6.2E-62 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal M634_06120 f419684a23164143e051dfd867b507fa 634 PRINTS PR00775 90kDa heat shock protein signature 195 213 6.2E-62 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal M634_06120 f419684a23164143e051dfd867b507fa 634 PRINTS PR00775 90kDa heat shock protein signature 31 53 6.2E-62 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal M634_06120 f419684a23164143e051dfd867b507fa 634 PRINTS PR00775 90kDa heat shock protein signature 80 97 6.2E-62 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal M634_06120 f419684a23164143e051dfd867b507fa 634 PRINTS PR00775 90kDa heat shock protein signature 98 115 6.2E-62 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal M634_06120 f419684a23164143e051dfd867b507fa 634 PRINTS PR00775 90kDa heat shock protein signature 10 30 6.2E-62 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal M634_06120 f419684a23164143e051dfd867b507fa 634 PRINTS PR00775 90kDa heat shock protein signature 125 147 6.2E-62 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal M634_06120 f419684a23164143e051dfd867b507fa 634 Gene3D G3DSA:1.20.120.790 501 632 1.0E-42 T 12-10-2018 IPR037196 HSP90, C-terminal domain M634_06120 f419684a23164143e051dfd867b507fa 634 Hamap MF_00505 Chaperone protein HtpG [htpG]. 7 632 32.393 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 M634_06120 f419684a23164143e051dfd867b507fa 634 Gene3D G3DSA:3.40.50.11260 410 500 2.3E-34 T 12-10-2018 M634_06120 f419684a23164143e051dfd867b507fa 634 PIRSF PIRSF002583 1 634 5.4E-213 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 M634_06120 f419684a23164143e051dfd867b507fa 634 SMART SM00387 32 189 6.9E-6 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_06120 f419684a23164143e051dfd867b507fa 634 Gene3D G3DSA:3.30.565.10 6 219 9.1E-76 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_06120 f419684a23164143e051dfd867b507fa 634 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 176 1.3E-12 T 12-10-2018 M634_06120 f419684a23164143e051dfd867b507fa 634 SUPERFAMILY SSF110942 520 632 4.32E-34 T 12-10-2018 IPR037196 HSP90, C-terminal domain M634_06120 f419684a23164143e051dfd867b507fa 634 Pfam PF00183 Hsp90 protein 227 632 2.8E-127 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 M634_06120 f419684a23164143e051dfd867b507fa 634 SUPERFAMILY SSF55874 10 215 5.11E-63 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_22540 34a592869857b610e2d749aca709fe1d 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 218 2.0E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_22540 34a592869857b610e2d749aca709fe1d 220 SMART SM00862 147 218 4.0E-26 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_22540 34a592869857b610e2d749aca709fe1d 220 Pfam PF00072 Response regulator receiver domain 6 112 1.3E-16 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_22540 34a592869857b610e2d749aca709fe1d 220 SUPERFAMILY SSF46894 124 218 6.24E-29 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M634_22540 34a592869857b610e2d749aca709fe1d 220 SMART SM00448 3 111 1.4E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_22540 34a592869857b610e2d749aca709fe1d 220 Gene3D G3DSA:1.10.10.10 118 220 3.2E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_22540 34a592869857b610e2d749aca709fe1d 220 Gene3D G3DSA:3.40.50.2300 1 117 1.7E-28 T 12-10-2018 M634_22540 34a592869857b610e2d749aca709fe1d 220 SUPERFAMILY SSF52172 4 116 2.42E-27 T 12-10-2018 IPR011006 CheY-like superfamily M634_02245 fa3941a5c189777ba40894588f715db0 571 SUPERFAMILY SSF52540 3 253 3.06E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_02245 fa3941a5c189777ba40894588f715db0 571 SUPERFAMILY SSF52540 304 553 7.56E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_02245 fa3941a5c189777ba40894588f715db0 571 Pfam PF00005 ABC transporter 330 483 5.1E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_02245 fa3941a5c189777ba40894588f715db0 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 534 566 8.3E-4 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 M634_02245 fa3941a5c189777ba40894588f715db0 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 271 4.2E-8 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 M634_02245 fa3941a5c189777ba40894588f715db0 571 Gene3D G3DSA:3.40.50.300 301 571 1.3E-86 T 12-10-2018 M634_02245 fa3941a5c189777ba40894588f715db0 571 Gene3D G3DSA:3.40.50.300 1 295 1.6E-86 T 12-10-2018 M634_02245 fa3941a5c189777ba40894588f715db0 571 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_02245 fa3941a5c189777ba40894588f715db0 571 ProSitePatterns PS00211 ABC transporters family signature. 455 469 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_02245 fa3941a5c189777ba40894588f715db0 571 SMART SM00382 32 231 2.8E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_02245 fa3941a5c189777ba40894588f715db0 571 SMART SM00382 338 534 1.7E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_02245 fa3941a5c189777ba40894588f715db0 571 Pfam PF00005 ABC transporter 24 181 6.5E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_03525 29c4e5daccf5323d335979fae05f510c 570 Pfam PF17243 POTRA domain TamA domain 1 25 94 1.8E-19 T 12-10-2018 IPR035243 TamA, POTRA domain 1 M634_03525 29c4e5daccf5323d335979fae05f510c 570 Gene3D G3DSA:2.40.160.50 262 570 6.6E-96 T 12-10-2018 M634_03525 29c4e5daccf5323d335979fae05f510c 570 Pfam PF07244 Surface antigen variable number repeat 102 169 4.2E-6 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 M634_03525 29c4e5daccf5323d335979fae05f510c 570 Gene3D G3DSA:3.10.20.310 97 184 4.0E-29 T 12-10-2018 M634_03525 29c4e5daccf5323d335979fae05f510c 570 Gene3D G3DSA:3.10.20.310 185 261 1.2E-17 T 12-10-2018 M634_03525 29c4e5daccf5323d335979fae05f510c 570 Pfam PF01103 Surface antigen 274 567 1.7E-28 T 12-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 M634_03525 29c4e5daccf5323d335979fae05f510c 570 Gene3D G3DSA:3.10.20.310 20 96 1.6E-22 T 12-10-2018 M634_05355 f992319868a299e0dcb04e566c0693c2 294 Gene3D G3DSA:1.10.600.10 1 294 9.3E-113 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily M634_05355 f992319868a299e0dcb04e566c0693c2 294 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site M634_05355 f992319868a299e0dcb04e566c0693c2 294 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 79 95 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site M634_05355 f992319868a299e0dcb04e566c0693c2 294 SUPERFAMILY SSF48576 3 285 8.8E-86 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily M634_05355 f992319868a299e0dcb04e566c0693c2 294 Pfam PF00348 Polyprenyl synthetase 29 270 9.3E-58 T 12-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 M634_04125 53ad19563696a271fb54b0333fe7f4df 160 Pfam PF04386 Stringent starvation protein B 9 160 3.1E-43 T 12-10-2018 IPR007481 Stringent starvation protein B M634_04125 53ad19563696a271fb54b0333fe7f4df 160 SUPERFAMILY SSF101738 4 121 1.57E-50 T 12-10-2018 IPR036760 SspB-like superfamily M634_04125 53ad19563696a271fb54b0333fe7f4df 160 Gene3D G3DSA:2.30.30.220 3 146 1.5E-53 T 12-10-2018 IPR036760 SspB-like superfamily M634_04125 53ad19563696a271fb54b0333fe7f4df 160 PIRSF PIRSF005276 3 160 3.5E-64 T 12-10-2018 IPR007481 Stringent starvation protein B M634_00155 cd940285ecb4011c724043b8d2c4c8dd 466 Gene3D G3DSA:3.40.50.300 177 456 2.5E-106 T 12-10-2018 M634_00155 cd940285ecb4011c724043b8d2c4c8dd 466 SUPERFAMILY SSF52540 197 449 7.42E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_00155 cd940285ecb4011c724043b8d2c4c8dd 466 Pfam PF00772 DnaB-like helicase N terminal domain 20 121 4.5E-35 T 12-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 M634_00155 cd940285ecb4011c724043b8d2c4c8dd 466 Gene3D G3DSA:1.10.860.10 12 176 2.2E-53 T 12-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal M634_00155 cd940285ecb4011c724043b8d2c4c8dd 466 SUPERFAMILY SSF48024 18 129 4.58E-37 T 12-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 M634_00155 cd940285ecb4011c724043b8d2c4c8dd 466 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 20 457 5.7E-175 T 12-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 M634_00155 cd940285ecb4011c724043b8d2c4c8dd 466 Pfam PF03796 DnaB-like helicase C terminal domain 199 455 8.3E-113 T 12-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 M634_21175 2e4fcaf73a25229ded4b195f7639516f 128 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 127 2.0E-63 T 12-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 M634_21175 2e4fcaf73a25229ded4b195f7639516f 128 Pfam PF13411 MerR HTH family regulatory protein 1 67 1.5E-17 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M634_21175 2e4fcaf73a25229ded4b195f7639516f 128 SMART SM00422 1 70 1.1E-26 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M634_21175 2e4fcaf73a25229ded4b195f7639516f 128 SUPERFAMILY SSF46955 1 126 1.36E-33 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily M634_21175 2e4fcaf73a25229ded4b195f7639516f 128 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M634_21175 2e4fcaf73a25229ded4b195f7639516f 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 2.1E-7 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M634_21175 2e4fcaf73a25229ded4b195f7639516f 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 2.1E-7 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M634_21175 2e4fcaf73a25229ded4b195f7639516f 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 2.1E-7 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M634_21175 2e4fcaf73a25229ded4b195f7639516f 128 Gene3D G3DSA:1.10.1660.10 1 125 1.6E-32 T 12-10-2018 M634_02700 2cab0effdad9fcfba1bd77107c5cb579 336 Gene3D G3DSA:1.10.40.60 99 215 7.1E-92 T 12-10-2018 IPR038072 GspK, central domain superfamily M634_02700 2cab0effdad9fcfba1bd77107c5cb579 336 Gene3D G3DSA:3.30.1300.30 42 309 7.1E-92 T 12-10-2018 M634_02700 2cab0effdad9fcfba1bd77107c5cb579 336 SUPERFAMILY SSF54523 36 325 1.88E-36 T 12-10-2018 M634_02700 2cab0effdad9fcfba1bd77107c5cb579 336 Gene3D G3DSA:1.10.40.60 216 285 7.1E-92 T 12-10-2018 IPR038072 GspK, central domain superfamily M634_02700 2cab0effdad9fcfba1bd77107c5cb579 336 PIRSF PIRSF002786 1 328 1.9E-65 T 12-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 M634_02700 2cab0effdad9fcfba1bd77107c5cb579 336 SUPERFAMILY SSF158544 215 282 8.63E-20 T 12-10-2018 IPR038072 GspK, central domain superfamily M634_02700 2cab0effdad9fcfba1bd77107c5cb579 336 SUPERFAMILY SSF158544 101 213 9.42E-33 T 12-10-2018 IPR038072 GspK, central domain superfamily M634_02700 2cab0effdad9fcfba1bd77107c5cb579 336 Pfam PF03934 Type II secretion system (T2SS), protein K 30 317 1.4E-88 T 12-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 M634_23405 b130727d334c03581321d430b504a77e 678 Gene3D G3DSA:1.20.210.10 30 560 2.5E-183 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23405 b130727d334c03581321d430b504a77e 678 SUPERFAMILY SSF81442 43 557 2.75E-175 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23405 b130727d334c03581321d430b504a77e 678 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 57 503 8.5E-132 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23405 b130727d334c03581321d430b504a77e 678 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 648 0.0 T 12-10-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 M634_23405 b130727d334c03581321d430b504a77e 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 1.1E-93 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23405 b130727d334c03581321d430b504a77e 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 1.1E-93 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23405 b130727d334c03581321d430b504a77e 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 1.1E-93 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23405 b130727d334c03581321d430b504a77e 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 1.1E-93 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23405 b130727d334c03581321d430b504a77e 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 1.1E-93 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23405 b130727d334c03581321d430b504a77e 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 1.1E-93 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23405 b130727d334c03581321d430b504a77e 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 1.1E-93 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23405 b130727d334c03581321d430b504a77e 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 1.1E-93 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23405 b130727d334c03581321d430b504a77e 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 1.1E-93 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23405 b130727d334c03581321d430b504a77e 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 1.1E-93 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23405 b130727d334c03581321d430b504a77e 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 1.1E-93 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23405 b130727d334c03581321d430b504a77e 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 1.1E-93 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23405 b130727d334c03581321d430b504a77e 678 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 12-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_21775 94a8d601c9d983bbae0d6832667784b0 513 Pfam PF01645 Conserved region in glutamate synthase 170 480 2.1E-90 T 12-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 M634_21775 94a8d601c9d983bbae0d6832667784b0 513 Pfam PF09360 Iron-binding zinc finger CDGSH type 55 77 3.6E-8 T 12-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 M634_21775 94a8d601c9d983bbae0d6832667784b0 513 Pfam PF09360 Iron-binding zinc finger CDGSH type 11 40 8.0E-11 T 12-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 M634_21775 94a8d601c9d983bbae0d6832667784b0 513 PIRSF PIRSF500061 5 513 7.3E-159 T 12-10-2018 M634_21775 94a8d601c9d983bbae0d6832667784b0 513 SUPERFAMILY SSF51395 126 504 3.66E-98 T 12-10-2018 M634_21775 94a8d601c9d983bbae0d6832667784b0 513 SMART SM00704 47 82 3.6E-7 T 12-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 M634_21775 94a8d601c9d983bbae0d6832667784b0 513 SMART SM00704 9 46 5.1E-12 T 12-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 M634_21775 94a8d601c9d983bbae0d6832667784b0 513 Gene3D G3DSA:3.20.20.70 174 510 1.7E-99 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_21775 94a8d601c9d983bbae0d6832667784b0 513 PIRSF PIRSF006429 11 512 1.1E-150 T 12-10-2018 IPR024188 Glutamate synthase large subunit-like protein M634_21775 94a8d601c9d983bbae0d6832667784b0 513 Gene3D G3DSA:3.40.5.90 1 79 2.8E-33 T 12-10-2018 M634_03350 45105391f0f72787dbeb5ba6b8ee3184 130 Pfam PF00410 Ribosomal protein S8 5 129 3.6E-47 T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03350 45105391f0f72787dbeb5ba6b8ee3184 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.213 T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03350 45105391f0f72787dbeb5ba6b8ee3184 130 SUPERFAMILY SSF56047 2 129 3.01E-44 T 12-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03350 45105391f0f72787dbeb5ba6b8ee3184 130 Gene3D G3DSA:3.30.1490.10 73 130 1.1E-25 T 12-10-2018 M634_03350 45105391f0f72787dbeb5ba6b8ee3184 130 Gene3D G3DSA:3.30.1370.30 2 72 6.5E-26 T 12-10-2018 M634_03350 45105391f0f72787dbeb5ba6b8ee3184 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_04065 8b284a448a18afca9e6fbde27df866ed 626 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 3.7E-124 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 M634_04065 8b284a448a18afca9e6fbde27df866ed 626 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 3.7E-124 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 M634_04065 8b284a448a18afca9e6fbde27df866ed 626 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 3.7E-124 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 M634_04065 8b284a448a18afca9e6fbde27df866ed 626 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 3.7E-124 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 M634_04065 8b284a448a18afca9e6fbde27df866ed 626 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 3.7E-124 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 M634_04065 8b284a448a18afca9e6fbde27df866ed 626 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 3.7E-124 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 M634_04065 8b284a448a18afca9e6fbde27df866ed 626 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 3.7E-124 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 M634_04065 8b284a448a18afca9e6fbde27df866ed 626 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 3.7E-124 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 M634_04065 8b284a448a18afca9e6fbde27df866ed 626 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 3.7E-124 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 M634_04065 8b284a448a18afca9e6fbde27df866ed 626 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 3.7E-124 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 M634_04065 8b284a448a18afca9e6fbde27df866ed 626 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 3.7E-124 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 M634_04065 8b284a448a18afca9e6fbde27df866ed 626 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 3.7E-124 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 M634_04065 8b284a448a18afca9e6fbde27df866ed 626 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 3.7E-124 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 M634_04065 8b284a448a18afca9e6fbde27df866ed 626 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 3.7E-124 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 M634_04065 8b284a448a18afca9e6fbde27df866ed 626 Pfam PF00204 DNA gyrase B 218 384 1.4E-42 T 12-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 M634_04065 8b284a448a18afca9e6fbde27df866ed 626 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 556 618 7.2E-27 T 12-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 M634_04065 8b284a448a18afca9e6fbde27df866ed 626 SMART SM00387 27 173 3.6E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_04065 8b284a448a18afca9e6fbde27df866ed 626 SUPERFAMILY SSF56719 388 619 9.15E-80 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 M634_04065 8b284a448a18afca9e6fbde27df866ed 626 SMART SM00433 34 622 2.7E-216 T 12-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 M634_04065 8b284a448a18afca9e6fbde27df866ed 626 SUPERFAMILY SSF54211 217 382 2.47E-47 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M634_04065 8b284a448a18afca9e6fbde27df866ed 626 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 626 47.015 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 M634_04065 8b284a448a18afca9e6fbde27df866ed 626 Pfam PF01751 Toprim domain 413 521 8.9E-12 T 12-10-2018 IPR006171 TOPRIM domain M634_04065 8b284a448a18afca9e6fbde27df866ed 626 SUPERFAMILY SSF55874 5 215 3.59E-66 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_04065 8b284a448a18afca9e6fbde27df866ed 626 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 171 1.3E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_04065 8b284a448a18afca9e6fbde27df866ed 626 Gene3D G3DSA:3.40.50.670 390 621 2.9E-93 T 12-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 M634_04065 8b284a448a18afca9e6fbde27df866ed 626 Gene3D G3DSA:3.30.565.10 2 215 2.6E-75 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_04065 8b284a448a18afca9e6fbde27df866ed 626 Gene3D G3DSA:3.30.230.10 216 389 7.1E-58 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M634_04065 8b284a448a18afca9e6fbde27df866ed 626 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 3 623 0.0 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 M634_04065 8b284a448a18afca9e6fbde27df866ed 626 PRINTS PR00418 DNA topoisomerase II family signature 109 123 5.8E-58 T 12-10-2018 M634_04065 8b284a448a18afca9e6fbde27df866ed 626 PRINTS PR00418 DNA topoisomerase II family signature 414 428 5.8E-58 T 12-10-2018 M634_04065 8b284a448a18afca9e6fbde27df866ed 626 PRINTS PR00418 DNA topoisomerase II family signature 497 514 5.8E-58 T 12-10-2018 M634_04065 8b284a448a18afca9e6fbde27df866ed 626 PRINTS PR00418 DNA topoisomerase II family signature 31 46 5.8E-58 T 12-10-2018 M634_04065 8b284a448a18afca9e6fbde27df866ed 626 PRINTS PR00418 DNA topoisomerase II family signature 479 495 5.8E-58 T 12-10-2018 M634_04065 8b284a448a18afca9e6fbde27df866ed 626 PRINTS PR00418 DNA topoisomerase II family signature 266 279 5.8E-58 T 12-10-2018 M634_04065 8b284a448a18afca9e6fbde27df866ed 626 PRINTS PR00418 DNA topoisomerase II family signature 517 529 5.8E-58 T 12-10-2018 M634_04065 8b284a448a18afca9e6fbde27df866ed 626 PRINTS PR00418 DNA topoisomerase II family signature 560 576 5.8E-58 T 12-10-2018 M634_04065 8b284a448a18afca9e6fbde27df866ed 626 PRINTS PR00418 DNA topoisomerase II family signature 66 79 5.8E-58 T 12-10-2018 M634_02100 8cd12974b62ce677a69cb68a926a7cca 161 Pfam PF00731 AIR carboxylase 2 150 8.3E-65 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 M634_02100 8cd12974b62ce677a69cb68a926a7cca 161 SUPERFAMILY SSF52255 2 158 1.07E-66 T 12-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 M634_02100 8cd12974b62ce677a69cb68a926a7cca 161 PIRSF PIRSF001338 1 160 1.4E-68 T 12-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 M634_02100 8cd12974b62ce677a69cb68a926a7cca 161 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 3 157 4.6E-67 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 M634_02100 8cd12974b62ce677a69cb68a926a7cca 161 SMART SM01001 1 152 8.6E-104 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 M634_02100 8cd12974b62ce677a69cb68a926a7cca 161 Gene3D G3DSA:3.40.50.7700 1 161 2.9E-73 T 12-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 M634_02100 8cd12974b62ce677a69cb68a926a7cca 161 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 3 156 32.52 T 12-10-2018 IPR033747 Class I PurE M634_08285 9cf361ddab4e2aa1ce2c5be3c0f69668 340 SUPERFAMILY SSF52768 13 331 7.56E-84 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily M634_08285 9cf361ddab4e2aa1ce2c5be3c0f69668 340 Gene3D G3DSA:3.40.800.10 4 338 3.9E-131 T 12-10-2018 M634_08285 9cf361ddab4e2aa1ce2c5be3c0f69668 340 Hamap MF_00737 Formimidoylglutamase [hutG]. 8 327 42.86 T 12-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 M634_08285 9cf361ddab4e2aa1ce2c5be3c0f69668 340 ProSitePatterns PS01053 Arginase family signature. 255 276 - T 12-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 M634_08285 9cf361ddab4e2aa1ce2c5be3c0f69668 340 PIRSF PIRSF036979 24 333 4.5E-27 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 M634_08285 9cf361ddab4e2aa1ce2c5be3c0f69668 340 TIGRFAM TIGR01227 hutG: formimidoylglutamase 13 327 2.4E-115 T 12-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 M634_08285 9cf361ddab4e2aa1ce2c5be3c0f69668 340 Pfam PF00491 Arginase family 46 325 1.4E-60 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 M634_08285 9cf361ddab4e2aa1ce2c5be3c0f69668 340 PRINTS PR00116 Arginase signature 252 281 1.7E-5 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 M634_08285 9cf361ddab4e2aa1ce2c5be3c0f69668 340 PRINTS PR00116 Arginase signature 125 140 1.7E-5 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 M634_21785 780adf5789bfed5e4d7c8b5453e1f87a 724 SUPERFAMILY SSF48113 432 723 8.25E-111 T 12-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 M634_21785 780adf5789bfed5e4d7c8b5453e1f87a 724 Pfam PF00141 Peroxidase 82 398 5.0E-50 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 M634_21785 780adf5789bfed5e4d7c8b5453e1f87a 724 Pfam PF00141 Peroxidase 406 698 2.1E-35 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 M634_21785 780adf5789bfed5e4d7c8b5453e1f87a 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 67 92 4.3E-53 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 M634_21785 780adf5789bfed5e4d7c8b5453e1f87a 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 267 290 4.3E-53 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 M634_21785 780adf5789bfed5e4d7c8b5453e1f87a 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 26 48 4.3E-53 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 M634_21785 780adf5789bfed5e4d7c8b5453e1f87a 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 478 504 4.3E-53 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 M634_21785 780adf5789bfed5e4d7c8b5453e1f87a 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 52 65 4.3E-53 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 M634_21785 780adf5789bfed5e4d7c8b5453e1f87a 724 Gene3D G3DSA:1.10.420.20 191 397 1.9E-216 T 12-10-2018 M634_21785 780adf5789bfed5e4d7c8b5453e1f87a 724 Gene3D G3DSA:1.10.520.10 28 432 1.9E-216 T 12-10-2018 M634_21785 780adf5789bfed5e4d7c8b5453e1f87a 724 Gene3D G3DSA:1.10.420.10 578 699 1.3E-146 T 12-10-2018 M634_21785 780adf5789bfed5e4d7c8b5453e1f87a 724 SUPERFAMILY SSF48113 19 431 5.6E-154 T 12-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 M634_21785 780adf5789bfed5e4d7c8b5453e1f87a 724 PRINTS PR00458 Haem peroxidase superfamily signature 150 167 1.1E-17 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 M634_21785 780adf5789bfed5e4d7c8b5453e1f87a 724 PRINTS PR00458 Haem peroxidase superfamily signature 259 274 1.1E-17 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 M634_21785 780adf5789bfed5e4d7c8b5453e1f87a 724 PRINTS PR00458 Haem peroxidase superfamily signature 168 180 1.1E-17 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 M634_21785 780adf5789bfed5e4d7c8b5453e1f87a 724 PRINTS PR00458 Haem peroxidase superfamily signature 90 104 1.1E-17 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 M634_21785 780adf5789bfed5e4d7c8b5453e1f87a 724 PRINTS PR00458 Haem peroxidase superfamily signature 318 333 1.1E-17 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 M634_21785 780adf5789bfed5e4d7c8b5453e1f87a 724 Gene3D G3DSA:1.10.520.10 433 723 1.3E-146 T 12-10-2018 M634_21785 780adf5789bfed5e4d7c8b5453e1f87a 724 ProSitePatterns PS00436 Peroxidases active site signature. 90 101 - T 12-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 M634_21785 780adf5789bfed5e4d7c8b5453e1f87a 724 Hamap MF_01961 Catalase-peroxidase [katG]. 7 724 40.13 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 M634_21785 780adf5789bfed5e4d7c8b5453e1f87a 724 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 11 723 0.0 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 M634_02610 3e664a0161868c0a7822abae6464e0ae 609 Gene3D G3DSA:3.40.50.300 5 202 2.1E-68 T 12-10-2018 M634_02610 3e664a0161868c0a7822abae6464e0ae 609 SUPERFAMILY SSF54980 402 516 2.83E-26 T 12-10-2018 IPR035647 EF-G domain III/V-like M634_02610 3e664a0161868c0a7822abae6464e0ae 609 Pfam PF03144 Elongation factor Tu domain 2 223 293 3.4E-9 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 M634_02610 3e664a0161868c0a7822abae6464e0ae 609 Gene3D G3DSA:2.40.50.250 487 603 1.4E-129 T 12-10-2018 M634_02610 3e664a0161868c0a7822abae6464e0ae 609 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 9 603 5.2E-294 T 12-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 M634_02610 3e664a0161868c0a7822abae6464e0ae 609 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.8E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_02610 3e664a0161868c0a7822abae6464e0ae 609 PRINTS PR00315 GTP-binding elongation factor signature 91 102 1.8E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_02610 3e664a0161868c0a7822abae6464e0ae 609 PRINTS PR00315 GTP-binding elongation factor signature 11 24 1.8E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_02610 3e664a0161868c0a7822abae6464e0ae 609 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.8E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_02610 3e664a0161868c0a7822abae6464e0ae 609 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.8E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_02610 3e664a0161868c0a7822abae6464e0ae 609 SUPERFAMILY SSF50447 155 303 4.16E-33 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily M634_02610 3e664a0161868c0a7822abae6464e0ae 609 SUPERFAMILY SSF52540 5 211 2.18E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_02610 3e664a0161868c0a7822abae6464e0ae 609 SUPERFAMILY SSF54980 306 391 5.4E-16 T 12-10-2018 IPR035647 EF-G domain III/V-like M634_02610 3e664a0161868c0a7822abae6464e0ae 609 Gene3D G3DSA:3.30.70.240 393 486 1.4E-129 T 12-10-2018 M634_02610 3e664a0161868c0a7822abae6464e0ae 609 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 155 3.0E-24 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 M634_02610 3e664a0161868c0a7822abae6464e0ae 609 Pfam PF00679 Elongation factor G C-terminus 399 480 1.5E-21 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like M634_02610 3e664a0161868c0a7822abae6464e0ae 609 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site M634_02610 3e664a0161868c0a7822abae6464e0ae 609 Gene3D G3DSA:3.30.70.870 310 594 1.4E-129 T 12-10-2018 M634_02610 3e664a0161868c0a7822abae6464e0ae 609 Pfam PF00009 Elongation factor Tu GTP binding domain 8 198 7.6E-57 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_02610 3e664a0161868c0a7822abae6464e0ae 609 Gene3D G3DSA:2.40.30.10 203 303 1.2E-33 T 12-10-2018 M634_04910 bf80ac4ef99cb547742622cc3187f7a4 432 PIRSF PIRSF036388 1 432 1.3E-223 T 12-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 M634_04910 bf80ac4ef99cb547742622cc3187f7a4 432 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 109 422 4.3E-103 T 12-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 M634_04910 bf80ac4ef99cb547742622cc3187f7a4 432 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 276 283 - T 12-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 M634_04910 bf80ac4ef99cb547742622cc3187f7a4 432 Gene3D G3DSA:3.40.630.10 91 432 2.6E-107 T 12-10-2018 M634_04910 bf80ac4ef99cb547742622cc3187f7a4 432 PRINTS PR00481 Cytosol aminopeptidase signature 272 292 2.7E-45 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 M634_04910 bf80ac4ef99cb547742622cc3187f7a4 432 PRINTS PR00481 Cytosol aminopeptidase signature 191 208 2.7E-45 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 M634_04910 bf80ac4ef99cb547742622cc3187f7a4 432 PRINTS PR00481 Cytosol aminopeptidase signature 250 271 2.7E-45 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 M634_04910 bf80ac4ef99cb547742622cc3187f7a4 432 PRINTS PR00481 Cytosol aminopeptidase signature 300 315 2.7E-45 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 M634_04910 bf80ac4ef99cb547742622cc3187f7a4 432 PRINTS PR00481 Cytosol aminopeptidase signature 213 234 2.7E-45 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 M634_04910 bf80ac4ef99cb547742622cc3187f7a4 432 SUPERFAMILY SSF53187 105 428 3.14E-101 T 12-10-2018 M634_04910 bf80ac4ef99cb547742622cc3187f7a4 432 Pfam PF12404 Peptidase 5 81 7.9E-34 T 12-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 M634_04910 bf80ac4ef99cb547742622cc3187f7a4 432 Hamap MF_00504 Peptidase B [pepB]. 3 428 66.224 T 12-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 M634_24020 05705a2afeb2a5318532df3a5197682f 474 SUPERFAMILY SSF52794 380 466 2.04E-19 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 M634_24020 05705a2afeb2a5318532df3a5197682f 474 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 380 461 1.9E-10 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 M634_24020 05705a2afeb2a5318532df3a5197682f 474 Gene3D G3DSA:3.40.50.2300 366 468 1.6E-29 T 12-10-2018 M634_24020 05705a2afeb2a5318532df3a5197682f 474 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 9 343 8.4E-147 T 12-10-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197 M634_24020 05705a2afeb2a5318532df3a5197682f 474 Pfam PF02378 Phosphotransferase system, EIIC 19 276 7.7E-19 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 M634_06280 3b107a0a2c692e426b6ab0297ff42399 1123 Gene3D G3DSA:2.130.10.10 377 613 2.3E-18 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 M634_06280 3b107a0a2c692e426b6ab0297ff42399 1123 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1099 1115 1.6E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M634_06280 3b107a0a2c692e426b6ab0297ff42399 1123 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1084 1099 1.6E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M634_06280 3b107a0a2c692e426b6ab0297ff42399 1123 Gene3D G3DSA:2.130.10.10 129 359 1.7E-18 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 M634_06280 3b107a0a2c692e426b6ab0297ff42399 1123 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1070 1111 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 M634_06280 3b107a0a2c692e426b6ab0297ff42399 1123 Pfam PF12833 Helix-turn-helix domain 1040 1114 7.5E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_06280 3b107a0a2c692e426b6ab0297ff42399 1123 SUPERFAMILY SSF50969 195 433 4.32E-8 T 12-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like M634_06280 3b107a0a2c692e426b6ab0297ff42399 1123 Gene3D G3DSA:1.10.10.60 1012 1123 1.5E-25 T 12-10-2018 M634_06280 3b107a0a2c692e426b6ab0297ff42399 1123 SMART SM00342 1033 1115 1.6E-24 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_06280 3b107a0a2c692e426b6ab0297ff42399 1123 SUPERFAMILY SSF46689 1069 1115 4.44E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_06280 3b107a0a2c692e426b6ab0297ff42399 1123 Gene3D G3DSA:3.30.565.10 850 987 1.2E-5 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_06280 3b107a0a2c692e426b6ab0297ff42399 1123 SUPERFAMILY SSF63829 363 583 3.33E-8 T 12-10-2018 M634_24625 7a8688291ce534129118c8ea02118744 1479 Gene3D G3DSA:1.10.390.30 1280 1440 2.4E-10 T 12-10-2018 M634_24625 7a8688291ce534129118c8ea02118744 1479 Pfam PF13322 Domain of unknown function (DUF4092) 415 552 2.5E-32 T 12-10-2018 IPR025385 Domain of unknown function DUF4092 M634_24625 7a8688291ce534129118c8ea02118744 1479 SMART SM01276 1054 1352 3.0E-68 T 12-10-2018 IPR031161 Peptidase family M60 domain M634_24625 7a8688291ce534129118c8ea02118744 1479 Pfam PF17291 N-terminal domain of M60-like peptidases 1028 1140 8.5E-13 T 12-10-2018 IPR035423 M60-like domain, N-terminal M634_24625 7a8688291ce534129118c8ea02118744 1479 Pfam PF13402 Peptidase M60, enhancin and enhancin-like 1163 1432 1.5E-34 T 12-10-2018 IPR031161 Peptidase family M60 domain M634_08995 2e405a38db0052f27bfa75049357c6c2 286 SMART SM00342 193 276 4.0E-31 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_08995 2e405a38db0052f27bfa75049357c6c2 286 Gene3D G3DSA:1.10.10.60 173 284 6.5E-30 T 12-10-2018 M634_08995 2e405a38db0052f27bfa75049357c6c2 286 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 230 272 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 M634_08995 2e405a38db0052f27bfa75049357c6c2 286 SUPERFAMILY SSF46689 179 226 2.87E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_08995 2e405a38db0052f27bfa75049357c6c2 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 260 5.9E-8 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M634_08995 2e405a38db0052f27bfa75049357c6c2 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 260 276 5.9E-8 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M634_08995 2e405a38db0052f27bfa75049357c6c2 286 SUPERFAMILY SSF51215 32 103 8.11E-5 T 12-10-2018 IPR037923 Transcription regulator HTH-like M634_08995 2e405a38db0052f27bfa75049357c6c2 286 SUPERFAMILY SSF46689 229 277 5.82E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_08995 2e405a38db0052f27bfa75049357c6c2 286 Pfam PF12833 Helix-turn-helix domain 199 276 3.0E-25 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_07040 566e175fbbcb789c996f32d5e6e6ddf9 341 Gene3D G3DSA:2.40.160.10 20 341 6.1E-37 T 12-10-2018 IPR023614 Porin domain superfamily M634_07040 566e175fbbcb789c996f32d5e6e6ddf9 341 SUPERFAMILY SSF56935 20 340 2.87E-38 T 12-10-2018 M634_07040 566e175fbbcb789c996f32d5e6e6ddf9 341 Pfam PF13609 Gram-negative porin 7 316 1.8E-21 T 12-10-2018 M634_01865 3ad324ec508c391743bcc23fe8371b1e 453 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 10 453 5.1E-101 T 12-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 M634_01865 3ad324ec508c391743bcc23fe8371b1e 453 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 215 370 3.4E-22 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 M634_01865 3ad324ec508c391743bcc23fe8371b1e 453 Gene3D G3DSA:3.40.50.300 216 381 1.8E-103 T 12-10-2018 M634_01865 3ad324ec508c391743bcc23fe8371b1e 453 Gene3D G3DSA:3.30.1360.120 1 120 4.4E-39 T 12-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 M634_01865 3ad324ec508c391743bcc23fe8371b1e 453 Pfam PF01926 50S ribosome-binding GTPase 217 306 1.2E-23 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M634_01865 3ad324ec508c391743bcc23fe8371b1e 453 SUPERFAMILY SSF52540 70 371 5.04E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_01865 3ad324ec508c391743bcc23fe8371b1e 453 Pfam PF12631 MnmE helical domain 122 450 1.4E-61 T 12-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 M634_01865 3ad324ec508c391743bcc23fe8371b1e 453 SUPERFAMILY SSF116878 120 453 1.09E-52 T 12-10-2018 M634_01865 3ad324ec508c391743bcc23fe8371b1e 453 Gene3D G3DSA:1.20.120.430 121 453 1.8E-103 T 12-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 M634_01865 3ad324ec508c391743bcc23fe8371b1e 453 Pfam PF10396 GTP-binding protein TrmE N-terminus 5 119 1.9E-35 T 12-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 M634_01865 3ad324ec508c391743bcc23fe8371b1e 453 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 4 453 32.911 T 12-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 M634_13770 e0b93b897e1b0a8faa574a025af5c273 156 Pfam PF00578 AhpC/TSA family 7 134 1.5E-35 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 M634_13770 e0b93b897e1b0a8faa574a025af5c273 156 Gene3D G3DSA:3.40.30.10 3 155 4.8E-46 T 12-10-2018 M634_13770 e0b93b897e1b0a8faa574a025af5c273 156 PIRSF PIRSF000239 1 147 4.0E-18 T 12-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 M634_13770 e0b93b897e1b0a8faa574a025af5c273 156 SUPERFAMILY SSF52833 4 154 6.84E-48 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M634_00125 75ab96704cbd899c47e0a2b399f96a9f 153 Pfam PF13690 Chemotaxis phosphatase CheX 42 139 4.8E-22 T 12-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain M634_00125 75ab96704cbd899c47e0a2b399f96a9f 153 Gene3D G3DSA:3.40.1550.10 1 153 3.3E-46 T 12-10-2018 IPR028976 CheC-like superfamily M634_00125 75ab96704cbd899c47e0a2b399f96a9f 153 SUPERFAMILY SSF103039 1 153 1.83E-38 T 12-10-2018 IPR028976 CheC-like superfamily M634_05800 be9c14ff5a247581b3755e554722a506 911 Gene3D G3DSA:3.30.70.100 171 252 6.0E-18 T 12-10-2018 M634_05800 be9c14ff5a247581b3755e554722a506 911 Pfam PF00122 E1-E2 ATPase 397 577 4.3E-49 T 12-10-2018 M634_05800 be9c14ff5a247581b3755e554722a506 911 SUPERFAMILY SSF81653 399 496 1.57E-25 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 M634_05800 be9c14ff5a247581b3755e554722a506 911 Pfam PF00403 Heavy-metal-associated domain 6 61 3.8E-7 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 M634_05800 be9c14ff5a247581b3755e554722a506 911 Pfam PF00403 Heavy-metal-associated domain 177 236 4.2E-14 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 M634_05800 be9c14ff5a247581b3755e554722a506 911 Gene3D G3DSA:3.40.1110.10 609 728 1.6E-94 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 M634_05800 be9c14ff5a247581b3755e554722a506 911 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 310 906 2.4E-183 T 12-10-2018 M634_05800 be9c14ff5a247581b3755e554722a506 911 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 598 612 1.3E-27 T 12-10-2018 M634_05800 be9c14ff5a247581b3755e554722a506 911 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 446 460 1.3E-27 T 12-10-2018 M634_05800 be9c14ff5a247581b3755e554722a506 911 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 721 732 1.3E-27 T 12-10-2018 M634_05800 be9c14ff5a247581b3755e554722a506 911 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 743 753 1.3E-27 T 12-10-2018 M634_05800 be9c14ff5a247581b3755e554722a506 911 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 796 815 1.3E-27 T 12-10-2018 M634_05800 be9c14ff5a247581b3755e554722a506 911 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 819 831 1.3E-27 T 12-10-2018 M634_05800 be9c14ff5a247581b3755e554722a506 911 ProSitePatterns PS01047 Heavy-metal-associated domain. 177 206 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 M634_05800 be9c14ff5a247581b3755e554722a506 911 SUPERFAMILY SSF56784 596 902 2.98E-60 T 12-10-2018 IPR036412 HAD-like superfamily M634_05800 be9c14ff5a247581b3755e554722a506 911 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 600 606 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 M634_05800 be9c14ff5a247581b3755e554722a506 911 Gene3D G3DSA:3.40.50.1000 579 848 1.6E-94 T 12-10-2018 IPR023214 HAD superfamily M634_05800 be9c14ff5a247581b3755e554722a506 911 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 329 905 4.0E-183 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 M634_05800 be9c14ff5a247581b3755e554722a506 911 Gene3D G3DSA:2.70.150.20 384 500 4.4E-37 T 12-10-2018 M634_05800 be9c14ff5a247581b3755e554722a506 911 Pfam PF00702 haloacid dehalogenase-like hydrolase 594 810 8.4E-48 T 12-10-2018 M634_05800 be9c14ff5a247581b3755e554722a506 911 PRINTS PR00943 Copper-transporting ATPase signature 581 596 2.0E-13 T 12-10-2018 M634_05800 be9c14ff5a247581b3755e554722a506 911 PRINTS PR00943 Copper-transporting ATPase signature 519 533 2.0E-13 T 12-10-2018 M634_05800 be9c14ff5a247581b3755e554722a506 911 PRINTS PR00943 Copper-transporting ATPase signature 314 333 2.0E-13 T 12-10-2018 M634_05800 be9c14ff5a247581b3755e554722a506 911 PRINTS PR00943 Copper-transporting ATPase signature 217 237 2.0E-13 T 12-10-2018 M634_05800 be9c14ff5a247581b3755e554722a506 911 PRINTS PR00943 Copper-transporting ATPase signature 386 404 2.0E-13 T 12-10-2018 M634_05800 be9c14ff5a247581b3755e554722a506 911 PRINTS PR00943 Copper-transporting ATPase signature 187 201 2.0E-13 T 12-10-2018 M634_05800 be9c14ff5a247581b3755e554722a506 911 PRINTS PR00943 Copper-transporting ATPase signature 869 883 2.0E-13 T 12-10-2018 M634_05800 be9c14ff5a247581b3755e554722a506 911 PRINTS PR00943 Copper-transporting ATPase signature 773 790 2.0E-13 T 12-10-2018 M634_05800 be9c14ff5a247581b3755e554722a506 911 SUPERFAMILY SSF55008 65 125 8.77E-7 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 M634_05800 be9c14ff5a247581b3755e554722a506 911 Gene3D G3DSA:3.30.70.100 64 127 1.3E-5 T 12-10-2018 M634_05800 be9c14ff5a247581b3755e554722a506 911 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 368 874 7.4E-93 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 M634_05800 be9c14ff5a247581b3755e554722a506 911 Gene3D G3DSA:3.30.70.100 6 63 1.4E-7 T 12-10-2018 M634_05800 be9c14ff5a247581b3755e554722a506 911 SUPERFAMILY SSF55008 2 62 1.96E-8 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 M634_05800 be9c14ff5a247581b3755e554722a506 911 SUPERFAMILY SSF81665 363 862 1.28E-9 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 M634_05800 be9c14ff5a247581b3755e554722a506 911 SUPERFAMILY SSF55008 167 240 1.06E-16 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 M634_00545 063b4c62a94299af5df69cc76c0efdd9 669 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 212 329 8.0E-40 T 12-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 M634_00545 063b4c62a94299af5df69cc76c0efdd9 669 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 667 25.277 T 12-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 M634_00545 063b4c62a94299af5df69cc76c0efdd9 669 Gene3D G3DSA:2.30.42.20 483 665 3.3E-56 T 12-10-2018 M634_00545 063b4c62a94299af5df69cc76c0efdd9 669 Gene3D G3DSA:3.30.1370.100 527 621 3.3E-56 T 12-10-2018 M634_00545 063b4c62a94299af5df69cc76c0efdd9 669 Gene3D G3DSA:3.30.230.10 217 329 1.7E-39 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M634_00545 063b4c62a94299af5df69cc76c0efdd9 669 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 118 3.4E-11 T 12-10-2018 M634_00545 063b4c62a94299af5df69cc76c0efdd9 669 Pfam PF08676 MutL C terminal dimerisation domain 483 623 9.0E-31 T 12-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 M634_00545 063b4c62a94299af5df69cc76c0efdd9 669 SUPERFAMILY SSF54211 191 330 2.31E-38 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M634_00545 063b4c62a94299af5df69cc76c0efdd9 669 SMART SM00853 486 629 4.7E-17 T 12-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 M634_00545 063b4c62a94299af5df69cc76c0efdd9 669 SUPERFAMILY SSF55874 1 207 1.57E-53 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_00545 063b4c62a94299af5df69cc76c0efdd9 669 Gene3D G3DSA:3.30.565.10 1 216 5.3E-71 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_00545 063b4c62a94299af5df69cc76c0efdd9 669 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 12-10-2018 IPR014762 DNA mismatch repair, conserved site M634_00545 063b4c62a94299af5df69cc76c0efdd9 669 SUPERFAMILY SSF118116 483 668 1.16E-39 T 12-10-2018 IPR037198 MutL, C-terminal domain superfamily M634_00545 063b4c62a94299af5df69cc76c0efdd9 669 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 7.5E-103 T 12-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 M634_00545 063b4c62a94299af5df69cc76c0efdd9 669 SMART SM01340 212 330 3.5E-59 T 12-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 M634_01970 445ce5f18d32be21285738523b871174 613 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 M634_01970 445ce5f18d32be21285738523b871174 613 SUPERFAMILY SSF143975 3 420 4.71E-136 T 12-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 M634_01970 445ce5f18d32be21285738523b871174 613 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 607 1.4E-267 T 12-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 M634_01970 445ce5f18d32be21285738523b871174 613 Pfam PF00920 Dehydratase family 34 604 1.9E-221 T 12-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 M634_01970 445ce5f18d32be21285738523b871174 613 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 607 45.358 T 12-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 M634_01970 445ce5f18d32be21285738523b871174 613 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 M634_01970 445ce5f18d32be21285738523b871174 613 SUPERFAMILY SSF52016 421 608 9.42E-62 T 12-10-2018 M634_01970 445ce5f18d32be21285738523b871174 613 Gene3D G3DSA:3.50.30.80 421 572 5.4E-56 T 12-10-2018 M634_14055 54e9146186b7f9f856e387181ce40c61 571 SUPERFAMILY SSF52954 463 570 3.32E-33 T 12-10-2018 M634_14055 54e9146186b7f9f856e387181ce40c61 571 Gene3D G3DSA:3.30.930.10 11 465 9.7E-235 T 12-10-2018 M634_14055 54e9146186b7f9f856e387181ce40c61 571 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 568 1.4E-245 T 12-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 M634_14055 54e9146186b7f9f856e387181ce40c61 571 Gene3D G3DSA:3.40.50.800 4 554 9.7E-235 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily M634_14055 54e9146186b7f9f856e387181ce40c61 571 SUPERFAMILY SSF55681 10 478 1.24E-96 T 12-10-2018 M634_14055 54e9146186b7f9f856e387181ce40c61 571 Gene3D G3DSA:3.90.960.10 240 389 9.7E-235 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 M634_14055 54e9146186b7f9f856e387181ce40c61 571 SUPERFAMILY SSF55826 218 390 6.8E-32 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 M634_14055 54e9146186b7f9f856e387181ce40c61 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 41.007 T 12-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 M634_14055 54e9146186b7f9f856e387181ce40c61 571 Pfam PF04073 Aminoacyl-tRNA editing domain 257 378 3.0E-26 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 M634_14055 54e9146186b7f9f856e387181ce40c61 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 5.0E-39 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 M634_14055 54e9146186b7f9f856e387181ce40c61 571 Pfam PF03129 Anticodon binding domain 475 568 1.2E-21 T 12-10-2018 IPR004154 Anticodon-binding M634_14055 54e9146186b7f9f856e387181ce40c61 571 PIRSF PIRSF001535 1 571 8.8E-265 T 12-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 M634_14055 54e9146186b7f9f856e387181ce40c61 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.4E-16 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 M634_14055 54e9146186b7f9f856e387181ce40c61 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.4E-16 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 M634_14055 54e9146186b7f9f856e387181ce40c61 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.4E-16 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 M634_14055 54e9146186b7f9f856e387181ce40c61 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.4E-16 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 M634_06640 5f5db84d04a44a237f9b570ea127b2f1 206 SUPERFAMILY SSF109604 16 196 8.57E-44 T 12-10-2018 M634_06640 5f5db84d04a44a237f9b570ea127b2f1 206 Pfam PF13023 HD domain 23 170 3.7E-16 T 12-10-2018 IPR006674 HD domain M634_06640 5f5db84d04a44a237f9b570ea127b2f1 206 SMART SM00471 38 163 8.0E-8 T 12-10-2018 IPR003607 HD/PDEase domain M634_06640 5f5db84d04a44a237f9b570ea127b2f1 206 Gene3D G3DSA:1.10.3210.10 11 206 2.8E-85 T 12-10-2018 M634_06640 5f5db84d04a44a237f9b570ea127b2f1 206 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 92 188 2.0E-40 T 12-10-2018 M634_06640 5f5db84d04a44a237f9b570ea127b2f1 206 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 15 206 46.038 T 12-10-2018 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 M634_00480 be40a14db17dfa87e61117d05669f281 228 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 6 225 36.126 T 12-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 M634_00480 be40a14db17dfa87e61117d05669f281 228 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 98 189 6.3E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M634_00480 be40a14db17dfa87e61117d05669f281 228 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 83 194 4.1E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M634_00480 be40a14db17dfa87e61117d05669f281 228 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 193 2.2E-39 T 12-10-2018 M634_00480 be40a14db17dfa87e61117d05669f281 228 Gene3D G3DSA:1.10.150.240 21 94 2.0E-65 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 M634_00480 be40a14db17dfa87e61117d05669f281 228 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 9 223 1.0E-60 T 12-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 M634_00480 be40a14db17dfa87e61117d05669f281 228 SUPERFAMILY SSF56784 5 224 1.07E-61 T 12-10-2018 IPR036412 HAD-like superfamily M634_00480 be40a14db17dfa87e61117d05669f281 228 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 89 193 4.0E-14 T 12-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 M634_00480 be40a14db17dfa87e61117d05669f281 228 Gene3D G3DSA:3.40.50.1000 9 216 2.0E-65 T 12-10-2018 IPR023214 HAD superfamily M634_12875 3941367f15db8d9ec28210c0b69ddce9 371 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 261 275 - T 12-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 M634_12875 3941367f15db8d9ec28210c0b69ddce9 371 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 119 6.4E-22 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 M634_12875 3941367f15db8d9ec28210c0b69ddce9 371 Gene3D G3DSA:3.30.360.10 134 350 7.8E-147 T 12-10-2018 M634_12875 3941367f15db8d9ec28210c0b69ddce9 371 SUPERFAMILY SSF55347 133 354 1.96E-78 T 12-10-2018 M634_12875 3941367f15db8d9ec28210c0b69ddce9 371 PIRSF PIRSF000148 1 371 1.7E-65 T 12-10-2018 M634_12875 3941367f15db8d9ec28210c0b69ddce9 371 Gene3D G3DSA:3.40.50.720 3 356 7.8E-147 T 12-10-2018 M634_12875 3941367f15db8d9ec28210c0b69ddce9 371 SMART SM00859 2 121 5.1E-21 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 M634_12875 3941367f15db8d9ec28210c0b69ddce9 371 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 143 353 1.6E-57 T 12-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 M634_12875 3941367f15db8d9ec28210c0b69ddce9 371 SUPERFAMILY SSF51735 1 146 2.91E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_12875 3941367f15db8d9ec28210c0b69ddce9 371 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 367 31.887 T 12-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 M634_12875 3941367f15db8d9ec28210c0b69ddce9 371 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 1 366 9.0E-189 T 12-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 M634_06505 0ab485c8f19adc4ca2fe3ee7cad3bd07 361 Pfam PF00891 O-methyltransferase 184 344 1.1E-11 T 12-10-2018 IPR001077 O-methyltransferase, family 2 GO:0008171 M634_06505 0ab485c8f19adc4ca2fe3ee7cad3bd07 361 Gene3D G3DSA:1.10.10.10 7 104 1.4E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_06505 0ab485c8f19adc4ca2fe3ee7cad3bd07 361 PIRSF PIRSF005739 8 351 2.3E-5 T 12-10-2018 IPR016461 O-methyltransferase COMT-type GO:0008168 M634_06505 0ab485c8f19adc4ca2fe3ee7cad3bd07 361 SUPERFAMILY SSF53335 107 347 4.82E-35 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_06505 0ab485c8f19adc4ca2fe3ee7cad3bd07 361 Gene3D G3DSA:3.40.50.150 172 356 1.4E-109 T 12-10-2018 M634_06505 0ab485c8f19adc4ca2fe3ee7cad3bd07 361 SUPERFAMILY SSF46785 25 105 8.85E-8 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_06505 0ab485c8f19adc4ca2fe3ee7cad3bd07 361 Gene3D G3DSA:1.20.58.1390 107 321 1.4E-109 T 12-10-2018 M634_07670 d1bb1ed794116010dcac496547b60561 192 Gene3D G3DSA:3.30.60.20 144 189 1.2E-7 T 12-10-2018 M634_07670 d1bb1ed794116010dcac496547b60561 192 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 12-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 M634_07670 d1bb1ed794116010dcac496547b60561 192 PIRSF PIRSF035805 1 192 1.1E-56 T 12-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 M634_07670 d1bb1ed794116010dcac496547b60561 192 Gene3D G3DSA:3.40.50.300 2 140 5.2E-24 T 12-10-2018 M634_07670 d1bb1ed794116010dcac496547b60561 192 Pfam PF00265 Thymidine kinase 2 186 3.2E-59 T 12-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 M634_07670 d1bb1ed794116010dcac496547b60561 192 SUPERFAMILY SSF52540 2 141 5.57E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_07670 d1bb1ed794116010dcac496547b60561 192 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 34.748 T 12-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 M634_07670 d1bb1ed794116010dcac496547b60561 192 SUPERFAMILY SSF57716 142 190 1.57E-16 T 12-10-2018 M634_08620 12fc6883eba16b67fea647203618d631 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 127 308 1.4E-26 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_08620 12fc6883eba16b67fea647203618d631 310 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 27 67 1.6E-12 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain M634_08620 12fc6883eba16b67fea647203618d631 310 Gene3D G3DSA:1.10.3720.10 99 306 4.4E-17 T 12-10-2018 IPR035906 MetI-like superfamily M634_08620 12fc6883eba16b67fea647203618d631 310 SUPERFAMILY SSF161098 106 291 2.09E-25 T 12-10-2018 IPR035906 MetI-like superfamily M634_02740 8863c5f33f1c6c4edc96d15e1c6de0a4 261 SUPERFAMILY SSF53474 9 258 1.61E-49 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_02740 8863c5f33f1c6c4edc96d15e1c6de0a4 261 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 11 260 44.814 T 12-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 M634_02740 8863c5f33f1c6c4edc96d15e1c6de0a4 261 Pfam PF00561 alpha/beta hydrolase fold 22 247 3.4E-23 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 M634_02740 8863c5f33f1c6c4edc96d15e1c6de0a4 261 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 17 259 2.0E-101 T 12-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 M634_02740 8863c5f33f1c6c4edc96d15e1c6de0a4 261 Gene3D G3DSA:3.40.50.1820 6 260 9.4E-66 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_04770 0f343c436571f863e2331d640ab352bc 696 SUPERFAMILY SSF56024 500 684 6.28E-70 T 12-10-2018 M634_04770 0f343c436571f863e2331d640ab352bc 696 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 681 27.51 T 12-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 M634_04770 0f343c436571f863e2331d640ab352bc 696 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 677 9.6E-264 T 12-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 M634_04770 0f343c436571f863e2331d640ab352bc 696 SUPERFAMILY SSF140356 4 104 4.05E-32 T 12-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 M634_04770 0f343c436571f863e2331d640ab352bc 696 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 2.7E-31 T 12-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 M634_04770 0f343c436571f863e2331d640ab352bc 696 SUPERFAMILY SSF143724 107 313 8.24E-64 T 12-10-2018 M634_04770 0f343c436571f863e2331d640ab352bc 696 Pfam PF02503 Polyphosphate kinase middle domain 119 320 4.1E-47 T 12-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 M634_04770 0f343c436571f863e2331d640ab352bc 696 Gene3D G3DSA:1.20.58.310 9 109 4.4E-36 T 12-10-2018 M634_04770 0f343c436571f863e2331d640ab352bc 696 SUPERFAMILY SSF56024 315 496 1.29E-53 T 12-10-2018 M634_04770 0f343c436571f863e2331d640ab352bc 696 Gene3D G3DSA:3.30.1840.10 110 307 9.9E-76 T 12-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 M634_04770 0f343c436571f863e2331d640ab352bc 696 Gene3D G3DSA:3.30.870.10 500 686 4.9E-74 T 12-10-2018 M634_04770 0f343c436571f863e2331d640ab352bc 696 Pfam PF13090 Polyphosphate kinase C-terminal domain 331 676 5.3E-145 T 12-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 M634_04770 0f343c436571f863e2331d640ab352bc 696 PIRSF PIRSF015589 1 694 3.9E-253 T 12-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 M634_04770 0f343c436571f863e2331d640ab352bc 696 Gene3D G3DSA:3.30.870.10 319 499 3.2E-72 T 12-10-2018 M634_18330 7366d5c43bbc2b2e5058006cb4473617 285 SMART SM00382 30 208 1.3E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_18330 7366d5c43bbc2b2e5058006cb4473617 285 SUPERFAMILY SSF52540 4 222 2.02E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_18330 7366d5c43bbc2b2e5058006cb4473617 285 Gene3D G3DSA:3.40.50.300 2 245 7.7E-46 T 12-10-2018 M634_18330 7366d5c43bbc2b2e5058006cb4473617 285 Pfam PF00005 ABC transporter 21 158 5.5E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_13930 69a09577fda3e6707d98935ae56c2fd3 150 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 146 2.5E-59 T 12-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 M634_13930 69a09577fda3e6707d98935ae56c2fd3 150 Pfam PF07977 FabA-like domain 17 141 1.1E-39 T 12-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 M634_13930 69a09577fda3e6707d98935ae56c2fd3 150 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 36.564 T 12-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 M634_13930 69a09577fda3e6707d98935ae56c2fd3 150 SUPERFAMILY SSF54637 7 146 1.34E-48 T 12-10-2018 IPR029069 HotDog domain superfamily M634_13930 69a09577fda3e6707d98935ae56c2fd3 150 Gene3D G3DSA:3.10.129.10 2 150 4.0E-61 T 12-10-2018 M634_04850 6dc2475e11ac6e28a608537ed9e6d83c 618 Gene3D G3DSA:3.30.1360.200 281 434 3.6E-50 T 12-10-2018 M634_04850 6dc2475e11ac6e28a608537ed9e6d83c 618 Pfam PF13721 SecD export protein N-terminal TM region 2 103 6.9E-37 T 12-10-2018 IPR027398 SecD export protein N-terminal TM domain M634_04850 6dc2475e11ac6e28a608537ed9e6d83c 618 Pfam PF02355 Protein export membrane protein 436 597 8.4E-18 T 12-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial M634_04850 6dc2475e11ac6e28a608537ed9e6d83c 618 SUPERFAMILY SSF82866 413 609 2.35E-44 T 12-10-2018 M634_04850 6dc2475e11ac6e28a608537ed9e6d83c 618 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 618 47.598 T 12-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 M634_04850 6dc2475e11ac6e28a608537ed9e6d83c 618 PRINTS PR00702 Acriflavin resistance protein family signature 581 604 4.3E-5 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_04850 6dc2475e11ac6e28a608537ed9e6d83c 618 PRINTS PR00702 Acriflavin resistance protein family signature 506 530 4.3E-5 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_04850 6dc2475e11ac6e28a608537ed9e6d83c 618 PRINTS PR00702 Acriflavin resistance protein family signature 452 475 4.3E-5 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_04850 6dc2475e11ac6e28a608537ed9e6d83c 618 Pfam PF07549 SecD/SecF GG Motif 116 141 2.5E-7 T 12-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site M634_04850 6dc2475e11ac6e28a608537ed9e6d83c 618 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 604 1.8E-151 T 12-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 M634_04850 6dc2475e11ac6e28a608537ed9e6d83c 618 Gene3D G3DSA:3.30.70.3400 222 440 3.6E-50 T 12-10-2018 M634_04850 6dc2475e11ac6e28a608537ed9e6d83c 618 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 348 597 3.0E-82 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial M634_04850 6dc2475e11ac6e28a608537ed9e6d83c 618 Gene3D G3DSA:1.20.1640.10 451 603 2.4E-7 T 12-10-2018 M634_22630 3a69b028ec03c3552889943e3d2b88e2 395 Pfam PF00155 Aminotransferase class I and II 27 389 2.1E-65 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 M634_22630 3a69b028ec03c3552889943e3d2b88e2 395 SUPERFAMILY SSF53383 1 392 7.66E-100 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_22630 3a69b028ec03c3552889943e3d2b88e2 395 Gene3D G3DSA:3.40.640.10 45 312 1.0E-137 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_22630 3a69b028ec03c3552889943e3d2b88e2 395 Gene3D G3DSA:3.90.1150.10 11 389 1.0E-137 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M634_22630 3a69b028ec03c3552889943e3d2b88e2 395 PRINTS PR00799 Aspartate aminotransferase signature 338 356 5.2E-28 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 M634_22630 3a69b028ec03c3552889943e3d2b88e2 395 PRINTS PR00799 Aspartate aminotransferase signature 270 295 5.2E-28 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 M634_22630 3a69b028ec03c3552889943e3d2b88e2 395 PRINTS PR00799 Aspartate aminotransferase signature 203 215 5.2E-28 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 M634_22630 3a69b028ec03c3552889943e3d2b88e2 395 PRINTS PR00799 Aspartate aminotransferase signature 172 191 5.2E-28 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 M634_01165 2004ced13d0f69fe5d156c1a2cba952d 347 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 347 80.532 T 12-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 M634_01165 2004ced13d0f69fe5d156c1a2cba952d 347 Gene3D G3DSA:3.90.78.10 223 347 1.7E-41 T 12-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 M634_01165 2004ced13d0f69fe5d156c1a2cba952d 347 SUPERFAMILY SSF56176 8 198 1.85E-41 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 M634_01165 2004ced13d0f69fe5d156c1a2cba952d 347 Pfam PF01565 FAD binding domain 23 144 2.5E-18 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 M634_01165 2004ced13d0f69fe5d156c1a2cba952d 347 SUPERFAMILY SSF56194 207 341 1.96E-46 T 12-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 M634_01165 2004ced13d0f69fe5d156c1a2cba952d 347 Gene3D G3DSA:3.30.465.10 73 222 4.3E-52 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 M634_01165 2004ced13d0f69fe5d156c1a2cba952d 347 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 9 332 6.4E-87 T 12-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 M634_01165 2004ced13d0f69fe5d156c1a2cba952d 347 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 210 331 2.0E-30 T 12-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 M634_01165 2004ced13d0f69fe5d156c1a2cba952d 347 Gene3D G3DSA:3.30.43.10 1 71 1.2E-22 T 12-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 M634_09975 42485e53a2bb4b5ff3ad85b6cb0ac748 228 SUPERFAMILY SSF52540 23 198 1.03E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_09975 42485e53a2bb4b5ff3ad85b6cb0ac748 228 Gene3D G3DSA:3.40.50.300 4 195 5.0E-28 T 12-10-2018 M634_14970 65519854fa476793c27d9cfa107f2d21 887 PIRSF PIRSF000156 1 887 0.0 T 12-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 M634_14970 65519854fa476793c27d9cfa107f2d21 887 Gene3D G3DSA:3.40.50.920 707 887 7.1E-71 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 M634_14970 65519854fa476793c27d9cfa107f2d21 887 SUPERFAMILY SSF52922 702 886 1.6E-58 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 M634_14970 65519854fa476793c27d9cfa107f2d21 887 SUPERFAMILY SSF52518 56 469 1.45E-140 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold M634_14970 65519854fa476793c27d9cfa107f2d21 887 Gene3D G3DSA:3.40.50.970 472 706 4.2E-111 T 12-10-2018 M634_14970 65519854fa476793c27d9cfa107f2d21 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 104 298 6.5E-10 T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 M634_14970 65519854fa476793c27d9cfa107f2d21 887 SUPERFAMILY SSF52518 474 701 1.3E-98 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold M634_14970 65519854fa476793c27d9cfa107f2d21 887 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 4 886 0.0 T 12-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 M634_14970 65519854fa476793c27d9cfa107f2d21 887 Gene3D G3DSA:3.40.50.970 55 471 1.6E-133 T 12-10-2018 M634_03345 e0ef5f4d50981bb362db9bc1c5633f3f 101 SUPERFAMILY SSF57716 2 101 7.06E-37 T 12-10-2018 M634_03345 e0ef5f4d50981bb362db9bc1c5633f3f 101 Pfam PF00253 Ribosomal protein S14p/S29e 48 100 1.3E-24 T 12-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_03345 e0ef5f4d50981bb362db9bc1c5633f3f 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 12-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03345 e0ef5f4d50981bb362db9bc1c5633f3f 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.761 T 12-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid M634_03345 e0ef5f4d50981bb362db9bc1c5633f3f 101 Gene3D G3DSA:4.10.830.10 43 101 5.7E-23 T 12-10-2018 M634_11680 1b9201a80b7d2fcdc140499acd28e5a3 541 SMART SM00283 271 532 4.1E-46 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_11680 1b9201a80b7d2fcdc140499acd28e5a3 541 Gene3D G3DSA:1.10.287.950 203 534 1.6E-63 T 12-10-2018 M634_11680 1b9201a80b7d2fcdc140499acd28e5a3 541 SUPERFAMILY SSF58104 224 533 4.32E-61 T 12-10-2018 M634_11680 1b9201a80b7d2fcdc140499acd28e5a3 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 494 2.1E-40 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_11680 1b9201a80b7d2fcdc140499acd28e5a3 541 SMART SM00304 203 256 1.4E-5 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_15810 d2f350896b8f202cebf575c8aab58b32 153 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 1.7E-30 T 12-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal M634_15810 d2f350896b8f202cebf575c8aab58b32 153 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 2.0E-46 T 12-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal M634_15810 d2f350896b8f202cebf575c8aab58b32 153 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 150 2.5E-19 T 12-10-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal M634_15810 d2f350896b8f202cebf575c8aab58b32 153 SUPERFAMILY SSF54893 2 100 7.72E-36 T 12-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily M634_15810 d2f350896b8f202cebf575c8aab58b32 153 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 150 1.5E-61 T 12-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 M634_15810 d2f350896b8f202cebf575c8aab58b32 153 SUPERFAMILY SSF57825 101 151 4.71E-16 T 12-10-2018 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily M634_15810 d2f350896b8f202cebf575c8aab58b32 153 Gene3D G3DSA:2.30.30.20 101 153 1.9E-24 T 12-10-2018 M634_15810 d2f350896b8f202cebf575c8aab58b32 153 Gene3D G3DSA:3.30.70.140 1 100 1.0E-36 T 12-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily M634_15810 d2f350896b8f202cebf575c8aab58b32 153 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 33.949 T 12-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 M634_05295 a402bedbbe33268b8daff57fd8670edb 129 Pfam PF07417 Transcriptional regulator Crl 6 123 3.6E-49 T 12-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 M634_05295 a402bedbbe33268b8daff57fd8670edb 129 Gene3D G3DSA:3.30.310.230 2 128 1.5E-45 T 12-10-2018 IPR038208 Sigma factor-binding protein Crl superfamily GO:0045893 M634_05295 a402bedbbe33268b8daff57fd8670edb 129 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 4 129 31.305 T 12-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 M634_13545 cd0fb4ac217d11fba4b78c54b20aee41 744 Gene3D G3DSA:2.30.30.40 602 731 4.4E-35 T 12-10-2018 M634_13545 cd0fb4ac217d11fba4b78c54b20aee41 744 SMART SM00260 594 735 4.6E-34 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 M634_13545 cd0fb4ac217d11fba4b78c54b20aee41 744 SUPERFAMILY SSF47226 6 129 3.53E-30 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 M634_13545 cd0fb4ac217d11fba4b78c54b20aee41 744 SMART SM01231 354 414 3.2E-17 T 12-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 M634_13545 cd0fb4ac217d11fba4b78c54b20aee41 744 Gene3D G3DSA:2.40.50.180 625 690 4.4E-35 T 12-10-2018 M634_13545 cd0fb4ac217d11fba4b78c54b20aee41 744 SUPERFAMILY SSF50341 601 735 2.88E-30 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 M634_13545 cd0fb4ac217d11fba4b78c54b20aee41 744 Pfam PF01584 CheW-like domain 608 737 1.9E-22 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 M634_13545 cd0fb4ac217d11fba4b78c54b20aee41 744 SMART SM00387 459 602 1.0E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_13545 cd0fb4ac217d11fba4b78c54b20aee41 744 Gene3D G3DSA:3.30.565.10 415 601 5.9E-56 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_13545 cd0fb4ac217d11fba4b78c54b20aee41 744 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 355 414 5.2E-12 T 12-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 M634_13545 cd0fb4ac217d11fba4b78c54b20aee41 744 PRINTS PR00344 Bacterial sensor protein C-terminal signature 586 599 9.4E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_13545 cd0fb4ac217d11fba4b78c54b20aee41 744 PRINTS PR00344 Bacterial sensor protein C-terminal signature 546 556 9.4E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_13545 cd0fb4ac217d11fba4b78c54b20aee41 744 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 518 9.4E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_13545 cd0fb4ac217d11fba4b78c54b20aee41 744 PRINTS PR00344 Bacterial sensor protein C-terminal signature 562 580 9.4E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_13545 cd0fb4ac217d11fba4b78c54b20aee41 744 SMART SM00073 6 103 3.3E-20 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 M634_13545 cd0fb4ac217d11fba4b78c54b20aee41 744 Gene3D G3DSA:1.10.287.560 355 414 3.2E-19 T 12-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 M634_13545 cd0fb4ac217d11fba4b78c54b20aee41 744 SUPERFAMILY SSF55874 417 600 5.11E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_13545 cd0fb4ac217d11fba4b78c54b20aee41 744 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 462 601 3.0E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_13545 cd0fb4ac217d11fba4b78c54b20aee41 744 Gene3D G3DSA:1.20.120.160 2 142 1.0E-35 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 M634_13545 cd0fb4ac217d11fba4b78c54b20aee41 744 Pfam PF01627 Hpt domain 8 100 6.6E-17 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 M634_13545 cd0fb4ac217d11fba4b78c54b20aee41 744 SUPERFAMILY SSF47384 356 415 7.45E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M634_21140 b8a360283b06524851c8045991977f7a 243 Pfam PF04973 Nicotinamide mononucleotide transporter 25 228 1.3E-54 T 12-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 M634_21140 b8a360283b06524851c8045991977f7a 243 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 25 231 1.1E-58 T 12-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 M634_10165 9a52a4396bf81e4a13f8ffef92fa9f21 579 Gene3D G3DSA:1.20.1560.10 5 318 2.8E-76 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M634_10165 9a52a4396bf81e4a13f8ffef92fa9f21 579 Pfam PF00664 ABC transporter transmembrane region 21 291 3.4E-44 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 M634_10165 9a52a4396bf81e4a13f8ffef92fa9f21 579 SUPERFAMILY SSF90123 7 320 4.19E-74 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M634_10165 9a52a4396bf81e4a13f8ffef92fa9f21 579 Gene3D G3DSA:3.40.50.300 335 579 1.4E-73 T 12-10-2018 M634_10165 9a52a4396bf81e4a13f8ffef92fa9f21 579 SMART SM00382 361 547 2.0E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_10165 9a52a4396bf81e4a13f8ffef92fa9f21 579 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_10165 9a52a4396bf81e4a13f8ffef92fa9f21 579 Pfam PF00005 ABC transporter 353 500 8.7E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_10165 9a52a4396bf81e4a13f8ffef92fa9f21 579 SUPERFAMILY SSF52540 338 571 2.51E-76 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_22040 a0e55a5978f150304061f18567d2eeaa 326 SUPERFAMILY SSF47413 1 58 1.29E-15 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M634_22040 a0e55a5978f150304061f18567d2eeaa 326 SMART SM00354 1 73 1.7E-26 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M634_22040 a0e55a5978f150304061f18567d2eeaa 326 Pfam PF13407 Periplasmic binding protein domain 64 258 3.1E-11 T 12-10-2018 IPR025997 Periplasmic binding protein M634_22040 a0e55a5978f150304061f18567d2eeaa 326 SUPERFAMILY SSF53822 61 313 1.96E-40 T 12-10-2018 IPR028082 Periplasmic binding protein-like I M634_22040 a0e55a5978f150304061f18567d2eeaa 326 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 50 1.2E-17 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M634_22040 a0e55a5978f150304061f18567d2eeaa 326 Gene3D G3DSA:1.10.260.40 1 61 1.5E-26 T 12-10-2018 M634_22040 a0e55a5978f150304061f18567d2eeaa 326 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 326 6.0E-156 T 12-10-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 M634_22040 a0e55a5978f150304061f18567d2eeaa 326 Gene3D G3DSA:3.40.50.2300 62 154 5.5E-21 T 12-10-2018 M634_22040 a0e55a5978f150304061f18567d2eeaa 326 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 12-10-2018 M634_22040 a0e55a5978f150304061f18567d2eeaa 326 Gene3D G3DSA:3.40.50.2300 155 326 6.9E-26 T 12-10-2018 M634_22940 5f790a8768875ea1a8d566436f93b3ac 102 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 10 100 1.0E-12 T 12-10-2018 IPR008407 Branched-chain amino acid transport, AzlD M634_08045 21aedee4c7492898ddb234abde822d93 374 Pfam PF07143 CrtC N-terminal lipocalin domain 79 248 2.5E-44 T 12-10-2018 IPR010791 AttH domain M634_08045 21aedee4c7492898ddb234abde822d93 374 SUPERFAMILY SSF159245 56 374 3.27E-91 T 12-10-2018 M634_08045 21aedee4c7492898ddb234abde822d93 374 Gene3D G3DSA:2.40.370.10 67 251 6.1E-54 T 12-10-2018 IPR023374 AttH-like domain superfamily M634_08045 21aedee4c7492898ddb234abde822d93 374 Pfam PF17186 Lipocalin-like domain 253 374 2.8E-33 T 12-10-2018 M634_08045 21aedee4c7492898ddb234abde822d93 374 Gene3D G3DSA:2.40.370.10 253 374 8.5E-23 T 12-10-2018 IPR023374 AttH-like domain superfamily M634_23440 007e81ec7233cface4a3b3d35b907668 497 Gene3D G3DSA:3.40.309.10 250 450 3.1E-140 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 M634_23440 007e81ec7233cface4a3b3d35b907668 497 Pfam PF00171 Aldehyde dehydrogenase family 14 477 2.5E-135 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 M634_23440 007e81ec7233cface4a3b3d35b907668 497 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 6 481 4.0E-236 T 12-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 M634_23440 007e81ec7233cface4a3b3d35b907668 497 SUPERFAMILY SSF53720 2 484 1.02E-141 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 M634_23440 007e81ec7233cface4a3b3d35b907668 497 Gene3D G3DSA:3.40.605.10 24 458 3.1E-140 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 M634_23440 007e81ec7233cface4a3b3d35b907668 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 M634_01580 73feba36b48fd058d1fd6209d08ba976 219 Pfam PF01810 LysE type translocator 16 212 2.8E-38 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 M634_01580 73feba36b48fd058d1fd6209d08ba976 219 PIRSF PIRSF006324 1 214 1.7E-48 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 M634_19280 621f8efc0e617d7d87be565f55defe0b 179 Pfam PF00293 NUDIX domain 44 153 3.9E-6 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 M634_19280 621f8efc0e617d7d87be565f55defe0b 179 Gene3D G3DSA:3.90.79.10 2 177 4.6E-41 T 12-10-2018 M634_19280 621f8efc0e617d7d87be565f55defe0b 179 SUPERFAMILY SSF55811 4 176 3.11E-37 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 M634_03855 1b0eba4bf0ab813f561781bb728e4cdf 267 Gene3D G3DSA:3.40.190.10 32 262 8.9E-93 T 12-10-2018 M634_03855 1b0eba4bf0ab813f561781bb728e4cdf 267 Gene3D G3DSA:3.40.190.10 112 217 8.9E-93 T 12-10-2018 M634_03855 1b0eba4bf0ab813f561781bb728e4cdf 267 SUPERFAMILY SSF53850 31 267 5.5E-83 T 12-10-2018 M634_03855 1b0eba4bf0ab813f561781bb728e4cdf 267 PIRSF PIRSF002854 3 267 4.4E-89 T 12-10-2018 IPR004872 Lipoprotein NlpA family M634_03855 1b0eba4bf0ab813f561781bb728e4cdf 267 Pfam PF03180 NLPA lipoprotein 31 267 4.5E-87 T 12-10-2018 IPR004872 Lipoprotein NlpA family M634_06590 f26a12b38c3490a805c2e33a45c921d0 434 Gene3D G3DSA:3.10.50.40 150 246 4.1E-107 T 12-10-2018 M634_06590 f26a12b38c3490a805c2e33a45c921d0 434 Gene3D G3DSA:3.30.70.1050 1 115 3.4E-41 T 12-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 M634_06590 f26a12b38c3490a805c2e33a45c921d0 434 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 2.6E-42 T 12-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 M634_06590 f26a12b38c3490a805c2e33a45c921d0 434 TIGRFAM TIGR00115 tig: trigger factor 11 412 2.0E-143 T 12-10-2018 IPR005215 Trigger factor GO:0015031 M634_06590 f26a12b38c3490a805c2e33a45c921d0 434 SUPERFAMILY SSF109998 248 429 1.08E-49 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily M634_06590 f26a12b38c3490a805c2e33a45c921d0 434 Gene3D G3DSA:1.10.3120.10 116 417 4.1E-107 T 12-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 M634_06590 f26a12b38c3490a805c2e33a45c921d0 434 Hamap MF_00303 Trigger factor [tig]. 1 418 21.954 T 12-10-2018 IPR005215 Trigger factor GO:0015031 M634_06590 f26a12b38c3490a805c2e33a45c921d0 434 SUPERFAMILY SSF54534 90 241 7.46E-37 T 12-10-2018 M634_06590 f26a12b38c3490a805c2e33a45c921d0 434 PIRSF PIRSF003095 1 434 1.7E-130 T 12-10-2018 IPR005215 Trigger factor GO:0015031 M634_06590 f26a12b38c3490a805c2e33a45c921d0 434 SUPERFAMILY SSF102735 1 130 3.01E-41 T 12-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 M634_06590 f26a12b38c3490a805c2e33a45c921d0 434 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 412 1.0E-40 T 12-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 M634_06590 f26a12b38c3490a805c2e33a45c921d0 434 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 233 1.4E-12 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain M634_17170 32ef33d75f038e9ff4f3544c03f92483 258 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 15 254 3.3E-58 T 12-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 M634_17170 32ef33d75f038e9ff4f3544c03f92483 258 Pfam PF01311 Bacterial export proteins, family 1 14 244 3.0E-60 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 M634_17170 32ef33d75f038e9ff4f3544c03f92483 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 5.3E-23 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 M634_17170 32ef33d75f038e9ff4f3544c03f92483 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 5.3E-23 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 M634_17170 32ef33d75f038e9ff4f3544c03f92483 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 179 201 5.3E-23 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 M634_17170 32ef33d75f038e9ff4f3544c03f92483 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 201 220 5.3E-23 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 M634_15290 c16c673f85db8dacfff6ab82ed302a49 299 ProSitePatterns PS00501 Signal peptidases I serine active site. 89 96 - T 12-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 M634_15290 c16c673f85db8dacfff6ab82ed302a49 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 144 156 3.9E-26 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 M634_15290 c16c673f85db8dacfff6ab82ed302a49 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 80 96 3.9E-26 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 M634_15290 c16c673f85db8dacfff6ab82ed302a49 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 232 251 3.9E-26 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 M634_15290 c16c673f85db8dacfff6ab82ed302a49 299 SUPERFAMILY SSF51306 78 298 3.14E-70 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily M634_15290 c16c673f85db8dacfff6ab82ed302a49 299 ProSitePatterns PS00760 Signal peptidases I lysine active site. 146 158 - T 12-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 M634_15290 c16c673f85db8dacfff6ab82ed302a49 299 Pfam PF10502 Signal peptidase, peptidase S26 220 269 9.9E-8 T 12-10-2018 IPR019533 Peptidase S26 M634_15290 c16c673f85db8dacfff6ab82ed302a49 299 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 66 272 5.5E-48 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 M634_15290 c16c673f85db8dacfff6ab82ed302a49 299 Gene3D G3DSA:2.170.230.10 155 231 2.5E-74 T 12-10-2018 M634_15290 c16c673f85db8dacfff6ab82ed302a49 299 ProSitePatterns PS00761 Signal peptidases I signature 3. 237 250 - T 12-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 M634_15290 c16c673f85db8dacfff6ab82ed302a49 299 Pfam PF00717 Peptidase S24-like 86 161 7.4E-22 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C M634_15290 c16c673f85db8dacfff6ab82ed302a49 299 Gene3D G3DSA:2.10.109.10 78 272 2.5E-74 T 12-10-2018 M634_13955 9a6ee13df5a8796befb5750ff85c2bfd 401 SUPERFAMILY SSF69055 302 399 1.14E-29 T 12-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 M634_13955 9a6ee13df5a8796befb5750ff85c2bfd 401 PIRSF PIRSF006205 1 401 7.2E-150 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 M634_13955 9a6ee13df5a8796befb5750ff85c2bfd 401 Gene3D G3DSA:1.10.1740.10 312 400 1.8E-27 T 12-10-2018 M634_13955 9a6ee13df5a8796befb5750ff85c2bfd 401 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 395 3.6E-160 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 M634_13955 9a6ee13df5a8796befb5750ff85c2bfd 401 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 1.4E-36 T 12-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 M634_13955 9a6ee13df5a8796befb5750ff85c2bfd 401 SUPERFAMILY SSF51735 2 150 4.98E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_13955 9a6ee13df5a8796befb5750ff85c2bfd 401 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 391 1.2E-38 T 12-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 M634_13955 9a6ee13df5a8796befb5750ff85c2bfd 401 SUPERFAMILY SSF55347 126 274 3.14E-62 T 12-10-2018 M634_13955 9a6ee13df5a8796befb5750ff85c2bfd 401 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 396 45.487 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 M634_13955 9a6ee13df5a8796befb5750ff85c2bfd 401 Gene3D G3DSA:3.40.50.720 1 150 5.4E-52 T 12-10-2018 M634_13955 9a6ee13df5a8796befb5750ff85c2bfd 401 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 2.8E-45 T 12-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 M634_22015 e72eed53e3a17aaa4bfe04285c687ecc 1019 Pfam PF00873 AcrB/AcrD/AcrF family 3 1011 1.5E-177 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_22015 e72eed53e3a17aaa4bfe04285c687ecc 1019 SUPERFAMILY SSF82866 292 491 1.29E-37 T 12-10-2018 M634_22015 e72eed53e3a17aaa4bfe04285c687ecc 1019 Gene3D G3DSA:1.20.1640.10 10 508 5.3E-266 T 12-10-2018 M634_22015 e72eed53e3a17aaa4bfe04285c687ecc 1019 SUPERFAMILY SSF82714 712 788 3.92E-10 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_22015 e72eed53e3a17aaa4bfe04285c687ecc 1019 SUPERFAMILY SSF82866 794 1015 3.53E-44 T 12-10-2018 M634_22015 e72eed53e3a17aaa4bfe04285c687ecc 1019 Gene3D G3DSA:3.30.70.1430 556 654 5.3E-266 T 12-10-2018 M634_22015 e72eed53e3a17aaa4bfe04285c687ecc 1019 Gene3D G3DSA:3.30.70.1430 40 804 5.3E-266 T 12-10-2018 M634_22015 e72eed53e3a17aaa4bfe04285c687ecc 1019 Gene3D G3DSA:3.30.70.1440 655 856 5.3E-266 T 12-10-2018 M634_22015 e72eed53e3a17aaa4bfe04285c687ecc 1019 Gene3D G3DSA:1.20.1640.10 509 1008 5.3E-266 T 12-10-2018 M634_22015 e72eed53e3a17aaa4bfe04285c687ecc 1019 SUPERFAMILY SSF82693 136 325 4.24E-21 T 12-10-2018 M634_22015 e72eed53e3a17aaa4bfe04285c687ecc 1019 Gene3D G3DSA:3.30.2090.10 706 796 5.3E-266 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_22015 e72eed53e3a17aaa4bfe04285c687ecc 1019 Gene3D G3DSA:3.30.2090.10 179 270 5.3E-266 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_22015 e72eed53e3a17aaa4bfe04285c687ecc 1019 SUPERFAMILY SSF82693 41 135 3.84E-20 T 12-10-2018 M634_22015 e72eed53e3a17aaa4bfe04285c687ecc 1019 Gene3D G3DSA:3.30.70.1320 135 328 5.3E-266 T 12-10-2018 M634_22015 e72eed53e3a17aaa4bfe04285c687ecc 1019 SUPERFAMILY SSF82714 185 266 1.57E-12 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_22015 e72eed53e3a17aaa4bfe04285c687ecc 1019 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 6.3E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_22015 e72eed53e3a17aaa4bfe04285c687ecc 1019 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 6.3E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_22015 e72eed53e3a17aaa4bfe04285c687ecc 1019 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 6.3E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_22015 e72eed53e3a17aaa4bfe04285c687ecc 1019 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 6.3E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_22015 e72eed53e3a17aaa4bfe04285c687ecc 1019 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 6.3E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_22015 e72eed53e3a17aaa4bfe04285c687ecc 1019 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 6.3E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_22260 ed3d120039770aa7371db75a0b720582 802 SUPERFAMILY SSF53474 441 716 7.72E-10 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_22260 ed3d120039770aa7371db75a0b720582 802 TIGRFAM TIGR03502 lipase_Pla1_cef: extracellular lipase, Pla-1/cef family 1 789 3.0E-271 T 12-10-2018 IPR020009 Extracellular lipase, Pla-1/cef family M634_22260 ed3d120039770aa7371db75a0b720582 802 Gene3D G3DSA:3.40.50.1820 434 744 4.0E-21 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_22260 ed3d120039770aa7371db75a0b720582 802 Pfam PF12262 Bacterial virulence factor lipase N-terminal 1 271 8.2E-136 T 12-10-2018 IPR025920 Bacterial virulence factor lipase, N-terminal domain M634_12175 c96728b2faeae310b30706c21a9c0bb0 304 SMART SM00342 217 300 2.7E-24 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_12175 c96728b2faeae310b30706c21a9c0bb0 304 Pfam PF12833 Helix-turn-helix domain 223 302 2.2E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_12175 c96728b2faeae310b30706c21a9c0bb0 304 SUPERFAMILY SSF46689 203 251 3.67E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_12175 c96728b2faeae310b30706c21a9c0bb0 304 Gene3D G3DSA:1.10.10.60 202 304 7.7E-27 T 12-10-2018 M634_12175 c96728b2faeae310b30706c21a9c0bb0 304 SUPERFAMILY SSF52317 5 184 1.83E-26 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M634_12175 c96728b2faeae310b30706c21a9c0bb0 304 SUPERFAMILY SSF46689 253 303 1.43E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_12175 c96728b2faeae310b30706c21a9c0bb0 304 Pfam PF01965 DJ-1/PfpI family 62 162 1.7E-9 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 M634_12175 c96728b2faeae310b30706c21a9c0bb0 304 Gene3D G3DSA:3.40.50.880 2 190 2.4E-32 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M634_07940 561ce8f35e4c218af51ad837e9df25dc 571 SUPERFAMILY SSF56300 34 367 1.5E-90 T 12-10-2018 M634_07940 561ce8f35e4c218af51ad837e9df25dc 571 SUPERFAMILY SSF55816 370 548 7.19E-41 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_07940 561ce8f35e4c218af51ad837e9df25dc 571 Pfam PF00149 Calcineurin-like phosphoesterase 39 264 4.7E-17 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 M634_07940 561ce8f35e4c218af51ad837e9df25dc 571 Gene3D G3DSA:3.90.780.10 369 554 1.0E-44 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_07940 561ce8f35e4c218af51ad837e9df25dc 571 ProSitePatterns PS00786 5'-nucleotidase signature 2. 114 125 - T 12-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_07940 561ce8f35e4c218af51ad837e9df25dc 571 Pfam PF02872 5'-nucleotidase, C-terminal domain 372 519 2.1E-30 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_07940 561ce8f35e4c218af51ad837e9df25dc 571 Gene3D G3DSA:3.60.21.10 33 368 6.7E-111 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like M634_07940 561ce8f35e4c218af51ad837e9df25dc 571 PRINTS PR01607 Apyrase family signature 293 313 1.7E-44 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_07940 561ce8f35e4c218af51ad837e9df25dc 571 PRINTS PR01607 Apyrase family signature 217 234 1.7E-44 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_07940 561ce8f35e4c218af51ad837e9df25dc 571 PRINTS PR01607 Apyrase family signature 494 513 1.7E-44 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_07940 561ce8f35e4c218af51ad837e9df25dc 571 PRINTS PR01607 Apyrase family signature 37 55 1.7E-44 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_07940 561ce8f35e4c218af51ad837e9df25dc 571 PRINTS PR01607 Apyrase family signature 248 271 1.7E-44 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_07940 561ce8f35e4c218af51ad837e9df25dc 571 PRINTS PR01607 Apyrase family signature 425 448 1.7E-44 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_22600 da92b8c7129c4d293bd5b647c755c87f 251 PIRSF PIRSF004846 1 251 1.4E-70 T 12-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 M634_22600 da92b8c7129c4d293bd5b647c755c87f 251 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 31 248 1.7E-62 T 12-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 M634_22600 da92b8c7129c4d293bd5b647c755c87f 251 SUPERFAMILY SSF53850 25 249 2.17E-64 T 12-10-2018 M634_22600 da92b8c7129c4d293bd5b647c755c87f 251 Pfam PF13531 Bacterial extracellular solute-binding protein 26 250 3.6E-49 T 12-10-2018 M634_22600 da92b8c7129c4d293bd5b647c755c87f 251 Gene3D G3DSA:3.40.190.10 28 249 5.0E-80 T 12-10-2018 M634_22600 da92b8c7129c4d293bd5b647c755c87f 251 Gene3D G3DSA:3.40.190.10 104 215 5.0E-80 T 12-10-2018 M634_18410 294f0af7732e0f818a1ce0a103429cf8 476 TIGRFAM TIGR00775 NhaD: Na+/H+ antiporter, NhaD family 45 463 3.4E-190 T 12-10-2018 IPR004672 Na+/H+ antiporter NhaD M634_18410 294f0af7732e0f818a1ce0a103429cf8 476 Pfam PF03600 Citrate transporter 45 420 1.7E-54 T 12-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 M634_12140 e85e4b770a96ccaea7ae52a11be6a37d 320 PIRSF PIRSF006278 20 318 2.6E-24 T 12-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase M634_12140 e85e4b770a96ccaea7ae52a11be6a37d 320 Gene3D G3DSA:3.40.50.1100 36 306 1.4E-24 T 12-10-2018 M634_12140 e85e4b770a96ccaea7ae52a11be6a37d 320 Gene3D G3DSA:3.40.50.1100 55 159 1.4E-24 T 12-10-2018 M634_12140 e85e4b770a96ccaea7ae52a11be6a37d 320 SUPERFAMILY SSF53686 31 317 1.48E-57 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme M634_12710 9672446e5b09e0a5effd7972ed8b3d90 198 PIRSF PIRSF005784 3 188 5.9E-87 T 12-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 M634_12710 9672446e5b09e0a5effd7972ed8b3d90 198 Pfam PF14697 4Fe-4S dicluster domain 107 161 5.9E-18 T 12-10-2018 M634_12710 9672446e5b09e0a5effd7972ed8b3d90 198 Gene3D G3DSA:1.10.15.40 38 81 8.0E-8 T 12-10-2018 M634_12710 9672446e5b09e0a5effd7972ed8b3d90 198 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 186 1.8E-87 T 12-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 M634_12710 9672446e5b09e0a5effd7972ed8b3d90 198 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 144 155 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M634_12710 9672446e5b09e0a5effd7972ed8b3d90 198 Pfam PF04060 Putative Fe-S cluster 44 75 1.9E-14 T 12-10-2018 IPR007202 4Fe-4S domain GO:0051536 M634_12710 9672446e5b09e0a5effd7972ed8b3d90 198 Gene3D G3DSA:3.30.70.20 82 181 1.8E-22 T 12-10-2018 M634_12710 9672446e5b09e0a5effd7972ed8b3d90 198 SUPERFAMILY SSF54862 37 173 9.43E-31 T 12-10-2018 M634_12710 9672446e5b09e0a5effd7972ed8b3d90 198 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 4 166 26.039 T 12-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 M634_17115 4936b7797a86e9174349f437792fef8e 449 Gene3D G3DSA:3.40.50.12240 22 448 2.7E-150 T 12-10-2018 M634_17115 4936b7797a86e9174349f437792fef8e 449 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 13 445 7.3E-164 T 12-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M634_17115 4936b7797a86e9174349f437792fef8e 449 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 356 365 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M634_17115 4936b7797a86e9174349f437792fef8e 449 SMART SM00382 166 349 0.0011 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_17115 4936b7797a86e9174349f437792fef8e 449 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 154 365 3.7E-72 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M634_17115 4936b7797a86e9174349f437792fef8e 449 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 31 443 1.7E-189 T 12-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M634_17115 4936b7797a86e9174349f437792fef8e 449 SUPERFAMILY SSF52540 102 370 2.56E-94 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_15335 1c404ec0099c21f67b40d3866a5d52ca 158 SUPERFAMILY SSF55826 6 157 3.53E-39 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 M634_15335 1c404ec0099c21f67b40d3866a5d52ca 158 Pfam PF04073 Aminoacyl-tRNA editing domain 28 148 5.1E-32 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 M634_15335 1c404ec0099c21f67b40d3866a5d52ca 158 Gene3D G3DSA:3.90.960.10 2 158 8.6E-43 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 M634_09305 78eae2471046d295492ac413d814df80 205 Gene3D G3DSA:3.30.1330.60 60 192 1.8E-29 T 12-10-2018 IPR036737 OmpA-like domain superfamily M634_09305 78eae2471046d295492ac413d814df80 205 PRINTS PR01021 OMPA domain signature 85 107 7.4E-7 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M634_09305 78eae2471046d295492ac413d814df80 205 PRINTS PR01021 OMPA domain signature 130 146 7.4E-7 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M634_09305 78eae2471046d295492ac413d814df80 205 PRINTS PR01021 OMPA domain signature 115 130 7.4E-7 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M634_09305 78eae2471046d295492ac413d814df80 205 Pfam PF00691 OmpA family 84 179 1.5E-19 T 12-10-2018 IPR006665 OmpA-like domain M634_09305 78eae2471046d295492ac413d814df80 205 SUPERFAMILY SSF103088 55 184 1.96E-30 T 12-10-2018 IPR036737 OmpA-like domain superfamily M634_19790 87dac9b4bdec75c7524fbbeafd030968 330 Gene3D G3DSA:3.30.390.10 1 110 3.5E-25 T 12-10-2018 IPR029017 Enolase-like, N-terminal M634_19790 87dac9b4bdec75c7524fbbeafd030968 330 Gene3D G3DSA:3.20.20.120 122 328 6.3E-56 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily M634_19790 87dac9b4bdec75c7524fbbeafd030968 330 SUPERFAMILY SSF54826 2 110 1.9E-20 T 12-10-2018 M634_19790 87dac9b4bdec75c7524fbbeafd030968 330 SMART SM00922 137 230 1.4E-14 T 12-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal M634_19790 87dac9b4bdec75c7524fbbeafd030968 330 SUPERFAMILY SSF51604 123 315 5.9E-52 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily M634_19790 87dac9b4bdec75c7524fbbeafd030968 330 Pfam PF13378 Enolase C-terminal domain-like 140 301 2.6E-27 T 12-10-2018 IPR029065 Enolase C-terminal domain-like M634_19790 87dac9b4bdec75c7524fbbeafd030968 330 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 8 119 1.1E-8 T 12-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain M634_19790 87dac9b4bdec75c7524fbbeafd030968 330 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 180 211 - T 12-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 M634_22105 2efeb98e0fd9dc06c0216381bfc1e42e 422 Pfam PF02954 Bacterial regulatory protein, Fis family 372 412 3.9E-10 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M634_22105 2efeb98e0fd9dc06c0216381bfc1e42e 422 Pfam PF14532 Sigma-54 interaction domain 143 289 1.1E-14 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 M634_22105 2efeb98e0fd9dc06c0216381bfc1e42e 422 SUPERFAMILY SSF46689 362 415 3.12E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_22105 2efeb98e0fd9dc06c0216381bfc1e42e 422 SUPERFAMILY SSF52540 142 347 1.13E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_22105 2efeb98e0fd9dc06c0216381bfc1e42e 422 Gene3D G3DSA:3.40.50.2300 2 131 1.2E-33 T 12-10-2018 M634_22105 2efeb98e0fd9dc06c0216381bfc1e42e 422 Pfam PF00072 Response regulator receiver domain 8 117 1.6E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_22105 2efeb98e0fd9dc06c0216381bfc1e42e 422 SMART SM00448 6 117 4.2E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_22105 2efeb98e0fd9dc06c0216381bfc1e42e 422 Gene3D G3DSA:1.10.8.60 289 351 5.8E-16 T 12-10-2018 M634_22105 2efeb98e0fd9dc06c0216381bfc1e42e 422 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 331 340 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site M634_22105 2efeb98e0fd9dc06c0216381bfc1e42e 422 Gene3D G3DSA:3.40.50.300 141 288 7.8E-25 T 12-10-2018 M634_22105 2efeb98e0fd9dc06c0216381bfc1e42e 422 Gene3D G3DSA:1.10.10.60 355 416 1.6E-12 T 12-10-2018 M634_22105 2efeb98e0fd9dc06c0216381bfc1e42e 422 SUPERFAMILY SSF52172 4 184 2.28E-35 T 12-10-2018 IPR011006 CheY-like superfamily M634_00860 91e4d5013af9937b6ef10adf9b242c83 575 Pfam PF00474 Sodium:solute symporter family 373 491 1.4E-16 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 M634_00860 91e4d5013af9937b6ef10adf9b242c83 575 Pfam PF00474 Sodium:solute symporter family 33 296 2.0E-36 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 M634_00860 91e4d5013af9937b6ef10adf9b242c83 575 Gene3D G3DSA:1.20.1730.10 344 554 1.2E-26 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily M634_00860 91e4d5013af9937b6ef10adf9b242c83 575 Gene3D G3DSA:1.20.1730.10 21 329 2.0E-35 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily M634_00860 91e4d5013af9937b6ef10adf9b242c83 575 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 7 566 5.1E-258 T 12-10-2018 IPR019899 Sodium/solute symporter, VC2705 subfamily M634_12115 60ad6afde636ca02163a4627fce93be6 777 SMART SM00729 367 617 1.6E-4 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 M634_12115 60ad6afde636ca02163a4627fce93be6 777 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 24 636 1.2E-262 T 12-10-2018 IPR022946 Uncharacterised protein family UPF0313 M634_12115 60ad6afde636ca02163a4627fce93be6 777 Pfam PF11842 Domain of unknown function (DUF3362) 585 723 3.0E-42 T 12-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal M634_12115 60ad6afde636ca02163a4627fce93be6 777 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 371 391 - T 12-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 M634_12115 60ad6afde636ca02163a4627fce93be6 777 Pfam PF08497 Radical SAM N-terminal 24 370 1.1E-142 T 12-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal M634_12115 60ad6afde636ca02163a4627fce93be6 777 Pfam PF04055 Radical SAM superfamily 371 576 6.9E-20 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 M634_12115 60ad6afde636ca02163a4627fce93be6 777 SUPERFAMILY SSF102114 370 605 4.58E-11 T 12-10-2018 M634_12115 60ad6afde636ca02163a4627fce93be6 777 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 24 638 49.088 T 12-10-2018 IPR022946 Uncharacterised protein family UPF0313 M634_12115 60ad6afde636ca02163a4627fce93be6 777 Gene3D G3DSA:3.80.30.20 366 630 2.1E-13 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe M634_06175 630b72149f82cf94556ac29d53523cd9 149 Gene3D G3DSA:1.10.10.10 1 84 9.8E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_06175 630b72149f82cf94556ac29d53523cd9 149 Gene3D G3DSA:3.30.1490.190 85 141 5.6E-23 T 12-10-2018 M634_06175 630b72149f82cf94556ac29d53523cd9 149 SUPERFAMILY SSF46785 5 135 8.86E-44 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_06175 630b72149f82cf94556ac29d53523cd9 149 Pfam PF01475 Ferric uptake regulator family 11 130 1.4E-46 T 12-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 M634_12360 4d7786c8557ffacf449ee979e15262e7 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 M634_12360 4d7786c8557ffacf449ee979e15262e7 248 Pfam PF00106 short chain dehydrogenase 13 208 1.2E-53 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_12360 4d7786c8557ffacf449ee979e15262e7 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 4.1E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_12360 4d7786c8557ffacf449ee979e15262e7 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 4.1E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_12360 4d7786c8557ffacf449ee979e15262e7 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 4.1E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_12360 4d7786c8557ffacf449ee979e15262e7 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 4.1E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_12360 4d7786c8557ffacf449ee979e15262e7 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 4.1E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_12360 4d7786c8557ffacf449ee979e15262e7 248 SUPERFAMILY SSF51735 9 242 2.24E-64 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_12360 4d7786c8557ffacf449ee979e15262e7 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 5.1E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_12360 4d7786c8557ffacf449ee979e15262e7 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 5.1E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_12360 4d7786c8557ffacf449ee979e15262e7 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 5.1E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_12360 4d7786c8557ffacf449ee979e15262e7 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 178 0.0073 T 12-10-2018 M634_12360 4d7786c8557ffacf449ee979e15262e7 248 Gene3D G3DSA:3.40.50.720 1 246 3.7E-71 T 12-10-2018 M634_07620 19f0d81b4af5ca98876132cc2a703775 357 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 4 357 51.046 T 12-10-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 M634_07620 19f0d81b4af5ca98876132cc2a703775 357 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 321 333 - T 12-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 M634_07620 19f0d81b4af5ca98876132cc2a703775 357 SUPERFAMILY SSF54211 254 344 4.81E-31 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M634_07620 19f0d81b4af5ca98876132cc2a703775 357 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 228 241 - T 12-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 M634_07620 19f0d81b4af5ca98876132cc2a703775 357 Gene3D G3DSA:3.30.230.40 166 256 2.3E-36 T 12-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 M634_07620 19f0d81b4af5ca98876132cc2a703775 357 SUPERFAMILY SSF56784 3 158 2.1E-39 T 12-10-2018 IPR036412 HAD-like superfamily M634_07620 19f0d81b4af5ca98876132cc2a703775 357 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 147 5.1E-47 T 12-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 M634_07620 19f0d81b4af5ca98876132cc2a703775 357 Gene3D G3DSA:3.30.230.40 257 357 1.9E-36 T 12-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 M634_07620 19f0d81b4af5ca98876132cc2a703775 357 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 5 164 2.5E-79 T 12-10-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 M634_07620 19f0d81b4af5ca98876132cc2a703775 357 Pfam PF08645 Polynucleotide kinase 3 phosphatase 6 133 3.1E-6 T 12-10-2018 IPR013954 Polynucleotide kinase 3 phosphatase Reactome: R-HSA-5649702 M634_07620 19f0d81b4af5ca98876132cc2a703775 357 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 6 151 4.0E-28 T 12-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 M634_07620 19f0d81b4af5ca98876132cc2a703775 357 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 169 357 37.714 T 12-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 M634_07620 19f0d81b4af5ca98876132cc2a703775 357 SUPERFAMILY SSF54211 169 253 1.64E-32 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M634_07620 19f0d81b4af5ca98876132cc2a703775 357 Gene3D G3DSA:3.40.50.1000 1 165 1.6E-47 T 12-10-2018 IPR023214 HAD superfamily M634_07620 19f0d81b4af5ca98876132cc2a703775 357 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 198 339 1.5E-65 T 12-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 M634_02515 699dc42c3e2fcc7bbdbd8dd23d415b5d 253 PIRSF PIRSF005902 1 253 9.7E-71 T 12-10-2018 IPR001130 TatD family GO:0016788 M634_02515 699dc42c3e2fcc7bbdbd8dd23d415b5d 253 SUPERFAMILY SSF51556 1 253 8.04E-81 T 12-10-2018 IPR032466 Metal-dependent hydrolase M634_02515 699dc42c3e2fcc7bbdbd8dd23d415b5d 253 Pfam PF01026 TatD related DNase 2 252 6.4E-65 T 12-10-2018 IPR001130 TatD family GO:0016788 M634_02515 699dc42c3e2fcc7bbdbd8dd23d415b5d 253 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 1 252 1.2E-70 T 12-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 M634_02515 699dc42c3e2fcc7bbdbd8dd23d415b5d 253 Gene3D G3DSA:3.20.20.140 1 253 4.1E-80 T 12-10-2018 M634_20010 126ddaf1d81c18f2a6ee26cef2c110e5 418 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 418 141.451 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 M634_20010 126ddaf1d81c18f2a6ee26cef2c110e5 418 SMART SM00788 3 417 6.0E-173 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 M634_20010 126ddaf1d81c18f2a6ee26cef2c110e5 418 Pfam PF00709 Adenylosuccinate synthetase 4 416 4.6E-130 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 M634_20010 126ddaf1d81c18f2a6ee26cef2c110e5 418 Gene3D G3DSA:3.90.170.10 266 418 7.9E-50 T 12-10-2018 M634_20010 126ddaf1d81c18f2a6ee26cef2c110e5 418 Gene3D G3DSA:3.40.440.10 6 255 2.7E-72 T 12-10-2018 M634_20010 126ddaf1d81c18f2a6ee26cef2c110e5 418 Gene3D G3DSA:1.10.300.10 99 200 2.7E-72 T 12-10-2018 M634_20010 126ddaf1d81c18f2a6ee26cef2c110e5 418 SUPERFAMILY SSF52540 1 417 1.59E-121 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_12630 a6887d0af5ae4ed289efe8d25f1ffcaa 315 SUPERFAMILY SSF47616 164 313 1.95E-36 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily M634_12630 a6887d0af5ae4ed289efe8d25f1ffcaa 315 Gene3D G3DSA:1.20.1050.10 167 315 2.8E-70 T 12-10-2018 M634_12630 a6887d0af5ae4ed289efe8d25f1ffcaa 315 Gene3D G3DSA:3.40.30.130 1 161 7.4E-66 T 12-10-2018 M634_12630 a6887d0af5ae4ed289efe8d25f1ffcaa 315 SUPERFAMILY SSF52833 31 149 1.46E-16 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M634_12630 a6887d0af5ae4ed289efe8d25f1ffcaa 315 PIRSF PIRSF015753 5 312 8.1E-135 T 12-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 M634_12630 a6887d0af5ae4ed289efe8d25f1ffcaa 315 Pfam PF13409 Glutathione S-transferase, N-terminal domain 56 146 2.2E-22 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 M634_12630 a6887d0af5ae4ed289efe8d25f1ffcaa 315 Pfam PF13410 Glutathione S-transferase, C-terminal domain 192 262 1.4E-12 T 12-10-2018 M634_20650 0586e5fa26e06e743c08de5421695104 663 SUPERFAMILY SSF52518 332 525 1.31E-67 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold M634_20650 0586e5fa26e06e743c08de5421695104 663 ProSitePatterns PS00802 Transketolase signature 2. 466 482 - T 12-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 M634_20650 0586e5fa26e06e743c08de5421695104 663 Pfam PF02779 Transketolase, pyrimidine binding domain 353 523 3.2E-47 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain M634_20650 0586e5fa26e06e743c08de5421695104 663 ProSitePatterns PS00801 Transketolase signature 1. 11 31 - T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 M634_20650 0586e5fa26e06e743c08de5421695104 663 SUPERFAMILY SSF52922 532 663 2.49E-45 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 M634_20650 0586e5fa26e06e743c08de5421695104 663 Gene3D G3DSA:3.40.50.920 537 663 6.5E-47 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 M634_20650 0586e5fa26e06e743c08de5421695104 663 Pfam PF02780 Transketolase, C-terminal domain 540 654 1.2E-21 T 12-10-2018 IPR033248 Transketolase, C-terminal domain M634_20650 0586e5fa26e06e743c08de5421695104 663 TIGRFAM TIGR00232 tktlase_bact: transketolase 6 662 0.0 T 12-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 M634_20650 0586e5fa26e06e743c08de5421695104 663 Gene3D G3DSA:3.40.50.970 325 536 1.1E-84 T 12-10-2018 M634_20650 0586e5fa26e06e743c08de5421695104 663 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 332 2.0E-167 T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 M634_20650 0586e5fa26e06e743c08de5421695104 663 SUPERFAMILY SSF52518 5 328 2.95E-121 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold M634_20650 0586e5fa26e06e743c08de5421695104 663 SMART SM00861 353 524 4.9E-67 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain M634_20650 0586e5fa26e06e743c08de5421695104 663 Gene3D G3DSA:3.40.50.970 2 324 1.6E-132 T 12-10-2018 M634_23200 f452a4ad3a21197995ef88f05fdf7097 301 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 53 259 1.0E-42 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 M634_23200 f452a4ad3a21197995ef88f05fdf7097 301 SUPERFAMILY SSF53790 49 288 2.09E-66 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 M634_23200 f452a4ad3a21197995ef88f05fdf7097 301 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 51 285 5.4E-84 T 12-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 M634_23200 f452a4ad3a21197995ef88f05fdf7097 301 Gene3D G3DSA:3.40.1010.10 49 166 3.9E-42 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 M634_23200 f452a4ad3a21197995ef88f05fdf7097 301 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 131 164 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 M634_23200 f452a4ad3a21197995ef88f05fdf7097 301 Gene3D G3DSA:3.30.950.10 167 295 1.3E-34 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 M634_09425 da6397e2363e546efc4d4fdeacdc8ef3 209 SMART SM00945 3 117 8.3E-66 T 12-10-2018 IPR016103 ProQ/FinO domain M634_09425 da6397e2363e546efc4d4fdeacdc8ef3 209 Pfam PF04352 ProQ/FINO family 6 113 1.1E-43 T 12-10-2018 IPR016103 ProQ/FinO domain M634_09425 da6397e2363e546efc4d4fdeacdc8ef3 209 Pfam PF17516 ProQ C-terminal domain 160 208 1.1E-22 T 12-10-2018 IPR035236 RNA chaperone ProQ, C-terminal M634_09425 da6397e2363e546efc4d4fdeacdc8ef3 209 Gene3D G3DSA:1.10.1710.10 1 117 7.3E-26 T 12-10-2018 IPR036442 ProQ/FinO domain superfamily M634_09425 da6397e2363e546efc4d4fdeacdc8ef3 209 SUPERFAMILY SSF48657 4 117 9.55E-41 T 12-10-2018 IPR036442 ProQ/FinO domain superfamily M634_09425 da6397e2363e546efc4d4fdeacdc8ef3 209 Hamap MF_00749 RNA chaperone ProQ [proQ]. 1 209 30.424 T 12-10-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 M634_12845 1449cba2fac4cc94c3e489671838685e 194 PIRSF PIRSF000349 1 194 4.7E-84 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M634_12845 1449cba2fac4cc94c3e489671838685e 194 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 12-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M634_12845 1449cba2fac4cc94c3e489671838685e 194 Gene3D G3DSA:2.40.500.20 83 194 2.9E-42 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M634_12845 1449cba2fac4cc94c3e489671838685e 194 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 4.7E-34 T 12-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M634_12845 1449cba2fac4cc94c3e489671838685e 194 SUPERFAMILY SSF54719 84 193 2.49E-43 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M634_12845 1449cba2fac4cc94c3e489671838685e 194 SUPERFAMILY SSF46609 1 84 5.24E-35 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M634_12845 1449cba2fac4cc94c3e489671838685e 194 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.5E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M634_12845 1449cba2fac4cc94c3e489671838685e 194 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 1.5E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M634_12845 1449cba2fac4cc94c3e489671838685e 194 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.5E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M634_12845 1449cba2fac4cc94c3e489671838685e 194 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 1.5E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M634_12845 1449cba2fac4cc94c3e489671838685e 194 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 1.5E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M634_12845 1449cba2fac4cc94c3e489671838685e 194 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 1.0E-38 T 12-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M634_12845 1449cba2fac4cc94c3e489671838685e 194 Gene3D G3DSA:1.10.287.990 20 82 8.8E-25 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 M634_18170 22b05d2f904957776a9ee024d283321f 221 Gene3D G3DSA:3.40.50.880 21 216 4.3E-35 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M634_18170 22b05d2f904957776a9ee024d283321f 221 SUPERFAMILY SSF52317 24 196 6.62E-26 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M634_18170 22b05d2f904957776a9ee024d283321f 221 Pfam PF03575 Peptidase family S51 6 196 2.5E-40 T 12-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 M634_12080 22962080cb90c0d4e8bc6516188c6a5d 130 Pfam PF16549 Type II secretion system (T2SS) pilotin, S protein 14 127 6.7E-49 T 12-10-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein M634_12080 22962080cb90c0d4e8bc6516188c6a5d 130 PIRSF PIRSF007010 1 130 1.6E-53 T 12-10-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein M634_12080 22962080cb90c0d4e8bc6516188c6a5d 130 Gene3D G3DSA:3.30.300.250 18 128 3.5E-41 T 12-10-2018 M634_13595 04ffc8f661e69f35887d5ff080de4c0f 289 Pfam PF00813 FliP family 92 283 1.1E-78 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M634_13595 04ffc8f661e69f35887d5ff080de4c0f 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 209 221 1.8E-17 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 M634_13595 04ffc8f661e69f35887d5ff080de4c0f 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 160 174 1.8E-17 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 M634_13595 04ffc8f661e69f35887d5ff080de4c0f 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 277 287 1.8E-17 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 M634_13595 04ffc8f661e69f35887d5ff080de4c0f 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 188 200 1.8E-17 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 M634_13595 04ffc8f661e69f35887d5ff080de4c0f 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 148 160 1.8E-17 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 M634_13595 04ffc8f661e69f35887d5ff080de4c0f 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 88 97 1.8E-17 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 M634_13595 04ffc8f661e69f35887d5ff080de4c0f 289 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 264 276 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M634_13595 04ffc8f661e69f35887d5ff080de4c0f 289 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 216 231 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M634_13595 04ffc8f661e69f35887d5ff080de4c0f 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 109 129 4.2E-66 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M634_13595 04ffc8f661e69f35887d5ff080de4c0f 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 90 109 4.2E-66 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M634_13595 04ffc8f661e69f35887d5ff080de4c0f 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 261 286 4.2E-66 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M634_13595 04ffc8f661e69f35887d5ff080de4c0f 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 237 258 4.2E-66 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M634_13595 04ffc8f661e69f35887d5ff080de4c0f 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 216 236 4.2E-66 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M634_13595 04ffc8f661e69f35887d5ff080de4c0f 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 129 148 4.2E-66 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M634_13595 04ffc8f661e69f35887d5ff080de4c0f 289 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 92 287 7.7E-82 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 M634_02385 6a22e687223fbb2550c3ed7a27111f60 175 SUPERFAMILY SSF47240 1 160 1.87E-58 T 12-10-2018 IPR009078 Ferritin-like superfamily M634_02385 6a22e687223fbb2550c3ed7a27111f60 175 Gene3D G3DSA:1.20.1260.10 1 175 2.0E-53 T 12-10-2018 IPR012347 Ferritin-like M634_02385 6a22e687223fbb2550c3ed7a27111f60 175 Pfam PF00210 Ferritin-like domain 8 143 6.1E-40 T 12-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 M634_22100 1f20b46e5a5c7577a29763f0bccd8f2e 784 SUPERFAMILY SSF47384 557 629 4.12E-11 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M634_22100 1f20b46e5a5c7577a29763f0bccd8f2e 784 SMART SM00387 672 784 3.3E-24 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_22100 1f20b46e5a5c7577a29763f0bccd8f2e 784 SMART SM00304 343 395 0.0065 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_22100 1f20b46e5a5c7577a29763f0bccd8f2e 784 PRINTS PR00344 Bacterial sensor protein C-terminal signature 715 729 5.1E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_22100 1f20b46e5a5c7577a29763f0bccd8f2e 784 PRINTS PR00344 Bacterial sensor protein C-terminal signature 733 743 5.1E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_22100 1f20b46e5a5c7577a29763f0bccd8f2e 784 PRINTS PR00344 Bacterial sensor protein C-terminal signature 768 781 5.1E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_22100 1f20b46e5a5c7577a29763f0bccd8f2e 784 PRINTS PR00344 Bacterial sensor protein C-terminal signature 744 762 5.1E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_22100 1f20b46e5a5c7577a29763f0bccd8f2e 784 Gene3D G3DSA:1.10.287.130 537 624 1.9E-19 T 12-10-2018 M634_22100 1f20b46e5a5c7577a29763f0bccd8f2e 784 Gene3D G3DSA:3.30.565.10 629 784 5.2E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_22100 1f20b46e5a5c7577a29763f0bccd8f2e 784 PIRSF PIRSF037119 2 784 0.0 T 12-10-2018 IPR017116 Signal transduction histidine kinase, PgtB M634_22100 1f20b46e5a5c7577a29763f0bccd8f2e 784 SMART SM00388 561 629 1.0E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_22100 1f20b46e5a5c7577a29763f0bccd8f2e 784 Pfam PF00512 His Kinase A (phospho-acceptor) domain 563 628 2.2E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_22100 1f20b46e5a5c7577a29763f0bccd8f2e 784 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 673 783 1.1E-15 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_22100 1f20b46e5a5c7577a29763f0bccd8f2e 784 SUPERFAMILY SSF55874 628 781 3.14E-32 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_00525 2d371387a4767901846a0645ed8092d3 400 Pfam PF12221 Bacterial membrane protein N terminal 1 58 4.9E-14 T 12-10-2018 IPR020980 Menbrane protein HflK, N-terminal M634_00525 2d371387a4767901846a0645ed8092d3 400 Gene3D G3DSA:3.30.479.30 118 250 4.8E-22 T 12-10-2018 M634_00525 2d371387a4767901846a0645ed8092d3 400 Pfam PF01145 SPFH domain / Band 7 family 92 263 8.8E-29 T 12-10-2018 IPR001107 Band 7 domain M634_00525 2d371387a4767901846a0645ed8092d3 400 SUPERFAMILY SSF117892 125 253 9.42E-22 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily M634_00525 2d371387a4767901846a0645ed8092d3 400 SMART SM00244 88 248 2.1E-52 T 12-10-2018 IPR001107 Band 7 domain M634_00525 2d371387a4767901846a0645ed8092d3 400 TIGRFAM TIGR01933 hflK: HflK protein 90 350 1.5E-121 T 12-10-2018 IPR010201 HflK GO:0016021 M634_00525 2d371387a4767901846a0645ed8092d3 400 PRINTS PR00721 Stomatin signature 95 117 1.3E-6 T 12-10-2018 IPR001972 Stomatin family GO:0016020 M634_00525 2d371387a4767901846a0645ed8092d3 400 PRINTS PR00721 Stomatin signature 198 221 1.3E-6 T 12-10-2018 IPR001972 Stomatin family GO:0016020 M634_00525 2d371387a4767901846a0645ed8092d3 400 PRINTS PR00721 Stomatin signature 142 163 1.3E-6 T 12-10-2018 IPR001972 Stomatin family GO:0016020 M634_00245 f4c0472d30f0260c2550d7ad0c0e03d8 242 Pfam PF08534 Redoxin 5 160 6.6E-33 T 12-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 M634_00245 f4c0472d30f0260c2550d7ad0c0e03d8 242 PRINTS PR00160 Glutaredoxin signature 173 191 3.3E-14 T 12-10-2018 IPR014025 Glutaredoxin subgroup M634_00245 f4c0472d30f0260c2550d7ad0c0e03d8 242 PRINTS PR00160 Glutaredoxin signature 228 241 3.3E-14 T 12-10-2018 IPR014025 Glutaredoxin subgroup M634_00245 f4c0472d30f0260c2550d7ad0c0e03d8 242 PRINTS PR00160 Glutaredoxin signature 214 227 3.3E-14 T 12-10-2018 IPR014025 Glutaredoxin subgroup M634_00245 f4c0472d30f0260c2550d7ad0c0e03d8 242 Gene3D G3DSA:3.40.30.10 4 165 7.7E-63 T 12-10-2018 M634_00245 f4c0472d30f0260c2550d7ad0c0e03d8 242 ProSitePatterns PS00195 Glutaredoxin active site. 175 191 - T 12-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 M634_00245 f4c0472d30f0260c2550d7ad0c0e03d8 242 Pfam PF00462 Glutaredoxin 173 231 4.3E-18 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 M634_00245 f4c0472d30f0260c2550d7ad0c0e03d8 242 SUPERFAMILY SSF52833 3 241 4.66E-48 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M634_00245 f4c0472d30f0260c2550d7ad0c0e03d8 242 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 164 242 2.1E-42 T 12-10-2018 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 M634_00245 f4c0472d30f0260c2550d7ad0c0e03d8 242 Gene3D G3DSA:3.40.30.10 171 241 2.8E-23 T 12-10-2018 M634_18980 32dfb50dbf7a8a269cf4ebc4f22e2def 288 Gene3D G3DSA:1.10.10.60 229 285 7.7E-16 T 12-10-2018 M634_18980 32dfb50dbf7a8a269cf4ebc4f22e2def 288 SUPERFAMILY SSF51215 27 96 5.1E-7 T 12-10-2018 IPR037923 Transcription regulator HTH-like M634_18980 32dfb50dbf7a8a269cf4ebc4f22e2def 288 SUPERFAMILY SSF46689 232 283 1.79E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_18980 32dfb50dbf7a8a269cf4ebc4f22e2def 288 Pfam PF02311 AraC-like ligand binding domain 26 98 1.1E-4 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 M634_18980 32dfb50dbf7a8a269cf4ebc4f22e2def 288 SUPERFAMILY SSF46689 180 227 1.19E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_18980 32dfb50dbf7a8a269cf4ebc4f22e2def 288 Gene3D G3DSA:1.10.10.60 178 228 6.1E-9 T 12-10-2018 M634_18980 32dfb50dbf7a8a269cf4ebc4f22e2def 288 SMART SM00342 196 279 1.3E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_18980 32dfb50dbf7a8a269cf4ebc4f22e2def 288 Pfam PF12833 Helix-turn-helix domain 202 280 1.1E-17 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_14395 d3ddd36c6b2f4c6195f2f88083391478 1032 Gene3D G3DSA:2.60.40.10 208 319 7.5E-26 T 12-10-2018 IPR013783 Immunoglobulin-like fold M634_14395 d3ddd36c6b2f4c6195f2f88083391478 1032 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 371 396 - T 12-10-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 M634_14395 d3ddd36c6b2f4c6195f2f88083391478 1032 Pfam PF16353 Domain of unknown function(DUF4981) 616 700 1.7E-14 T 12-10-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 M634_14395 d3ddd36c6b2f4c6195f2f88083391478 1032 SUPERFAMILY SSF51445 321 599 1.26E-84 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M634_14395 d3ddd36c6b2f4c6195f2f88083391478 1032 Gene3D G3DSA:2.60.40.10 602 706 1.2E-14 T 12-10-2018 IPR013783 Immunoglobulin-like fold M634_14395 d3ddd36c6b2f4c6195f2f88083391478 1032 Gene3D G3DSA:2.60.120.260 1 207 1.1E-73 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily M634_14395 d3ddd36c6b2f4c6195f2f88083391478 1032 Pfam PF02929 Beta galactosidase small chain 730 998 4.7E-70 T 12-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 M634_14395 d3ddd36c6b2f4c6195f2f88083391478 1032 SUPERFAMILY SSF74650 715 1001 1.36E-87 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 M634_14395 d3ddd36c6b2f4c6195f2f88083391478 1032 Gene3D G3DSA:2.70.98.10 733 1004 8.8E-82 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 M634_14395 d3ddd36c6b2f4c6195f2f88083391478 1032 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 436 450 - T 12-10-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 M634_14395 d3ddd36c6b2f4c6195f2f88083391478 1032 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 321 605 1.3E-114 T 12-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 M634_14395 d3ddd36c6b2f4c6195f2f88083391478 1032 Gene3D G3DSA:3.20.20.80 320 600 1.0E-101 T 12-10-2018 M634_14395 d3ddd36c6b2f4c6195f2f88083391478 1032 SUPERFAMILY SSF49303 613 706 3.12E-20 T 12-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily M634_14395 d3ddd36c6b2f4c6195f2f88083391478 1032 SUPERFAMILY SSF49303 209 319 3.5E-25 T 12-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily M634_14395 d3ddd36c6b2f4c6195f2f88083391478 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 330 344 4.6E-32 T 12-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 M634_14395 d3ddd36c6b2f4c6195f2f88083391478 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 361 379 4.6E-32 T 12-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 M634_14395 d3ddd36c6b2f4c6195f2f88083391478 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 507 522 4.6E-32 T 12-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 M634_14395 d3ddd36c6b2f4c6195f2f88083391478 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 436 451 4.6E-32 T 12-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 M634_14395 d3ddd36c6b2f4c6195f2f88083391478 1032 PRINTS PR00132 Glycosyl hydrolase family 2 signature 135 150 4.6E-32 T 12-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 M634_14395 d3ddd36c6b2f4c6195f2f88083391478 1032 SMART SM01038 728 999 1.7E-127 T 12-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 M634_14395 d3ddd36c6b2f4c6195f2f88083391478 1032 Pfam PF00703 Glycosyl hydrolases family 2 209 319 1.1E-17 T 12-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 M634_14395 d3ddd36c6b2f4c6195f2f88083391478 1032 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 44 207 3.4E-48 T 12-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 M634_14395 d3ddd36c6b2f4c6195f2f88083391478 1032 SUPERFAMILY SSF49785 2 206 1.42E-61 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily M634_18715 68d2c3f40a3fde31eaddf7dc6e91a3fc 263 SUPERFAMILY SSF53613 6 260 3.27E-61 T 12-10-2018 IPR029056 Ribokinase-like M634_18715 68d2c3f40a3fde31eaddf7dc6e91a3fc 263 Pfam PF02110 Hydroxyethylthiazole kinase family 10 252 5.7E-73 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 M634_18715 68d2c3f40a3fde31eaddf7dc6e91a3fc 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 88 105 2.0E-34 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 M634_18715 68d2c3f40a3fde31eaddf7dc6e91a3fc 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 119 133 2.0E-34 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 M634_18715 68d2c3f40a3fde31eaddf7dc6e91a3fc 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 18 25 2.0E-34 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 M634_18715 68d2c3f40a3fde31eaddf7dc6e91a3fc 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 62 70 2.0E-34 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 M634_18715 68d2c3f40a3fde31eaddf7dc6e91a3fc 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 31 52 2.0E-34 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 M634_18715 68d2c3f40a3fde31eaddf7dc6e91a3fc 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 163 180 2.0E-34 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 M634_18715 68d2c3f40a3fde31eaddf7dc6e91a3fc 263 Gene3D G3DSA:3.40.1190.20 1 262 4.0E-91 T 12-10-2018 IPR029056 Ribokinase-like M634_18715 68d2c3f40a3fde31eaddf7dc6e91a3fc 263 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 12 255 30.146 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 M634_18715 68d2c3f40a3fde31eaddf7dc6e91a3fc 263 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 10 253 6.4E-78 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 M634_18715 68d2c3f40a3fde31eaddf7dc6e91a3fc 263 PIRSF PIRSF000513 4 263 1.7E-99 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 M634_02840 97ee114eb2188d8652282b38c40015e1 453 PIRSF PIRSF037714 2 453 2.0E-170 T 12-10-2018 IPR017270 Putative MotA/TolQ/ExbB family protein M634_02840 97ee114eb2188d8652282b38c40015e1 453 Pfam PF01618 MotA/TolQ/ExbB proton channel family 317 434 2.7E-28 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel M634_14885 a37568d2a44a70d0def6d3a3a75d0df0 822 Gene3D G3DSA:3.40.50.300 1 179 1.6E-51 T 12-10-2018 M634_14885 a37568d2a44a70d0def6d3a3a75d0df0 822 SMART SM00847 387 477 2.2E-8 T 12-10-2018 IPR007502 Helicase-associated domain GO:0004386 M634_14885 a37568d2a44a70d0def6d3a3a75d0df0 822 Pfam PF00270 DEAD/DEAH box helicase 11 163 6.3E-10 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 M634_14885 a37568d2a44a70d0def6d3a3a75d0df0 822 SMART SM00487 5 186 1.0E-13 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M634_14885 a37568d2a44a70d0def6d3a3a75d0df0 822 PIRSF PIRSF005496 1 820 0.0 T 12-10-2018 M634_14885 a37568d2a44a70d0def6d3a3a75d0df0 822 Pfam PF00271 Helicase conserved C-terminal domain 207 326 8.3E-15 T 12-10-2018 IPR001650 Helicase, C-terminal M634_14885 a37568d2a44a70d0def6d3a3a75d0df0 822 Pfam PF04408 Helicase associated domain (HA2) 388 447 7.6E-9 T 12-10-2018 IPR007502 Helicase-associated domain GO:0004386 M634_14885 a37568d2a44a70d0def6d3a3a75d0df0 822 Gene3D G3DSA:1.20.120.1080 371 466 2.9E-7 T 12-10-2018 M634_14885 a37568d2a44a70d0def6d3a3a75d0df0 822 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 818 0.0 T 12-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 M634_14885 a37568d2a44a70d0def6d3a3a75d0df0 822 SUPERFAMILY SSF52540 12 462 2.33E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_14885 a37568d2a44a70d0def6d3a3a75d0df0 822 Pfam PF08482 ATP-dependent helicase C-terminal 674 806 1.1E-52 T 12-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal M634_14885 a37568d2a44a70d0def6d3a3a75d0df0 822 Gene3D G3DSA:3.40.50.300 180 345 3.4E-52 T 12-10-2018 M634_14885 a37568d2a44a70d0def6d3a3a75d0df0 822 SMART SM00490 226 327 2.7E-18 T 12-10-2018 IPR001650 Helicase, C-terminal M634_08645 4cb884eef76b397a33932083cd58d6e8 357 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 6 143 4.4E-56 T 12-10-2018 M634_08645 4cb884eef76b397a33932083cd58d6e8 357 Gene3D G3DSA:3.10.180.10 158 355 2.5E-69 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M634_08645 4cb884eef76b397a33932083cd58d6e8 357 PIRSF PIRSF009283 1 355 2.1E-125 T 12-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 M634_08645 4cb884eef76b397a33932083cd58d6e8 357 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 12 354 5.1E-132 T 12-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 M634_08645 4cb884eef76b397a33932083cd58d6e8 357 Gene3D G3DSA:3.10.180.10 3 155 4.1E-46 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M634_08645 4cb884eef76b397a33932083cd58d6e8 357 SUPERFAMILY SSF54593 5 341 3.2E-78 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M634_08645 4cb884eef76b397a33932083cd58d6e8 357 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 163 274 8.9E-14 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain M634_01265 bc8ae4ede0ab64307ebdf69687443da8 284 Gene3D G3DSA:1.20.120.1780 169 284 5.0E-13 T 12-10-2018 M634_01265 bc8ae4ede0ab64307ebdf69687443da8 284 Pfam PF01040 UbiA prenyltransferase family 24 266 9.4E-70 T 12-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 M634_01265 bc8ae4ede0ab64307ebdf69687443da8 284 Gene3D G3DSA:1.10.357.140 19 168 2.7E-44 T 12-10-2018 M634_01265 bc8ae4ede0ab64307ebdf69687443da8 284 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 1 284 29.946 T 12-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 M634_01265 bc8ae4ede0ab64307ebdf69687443da8 284 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 8 283 1.0E-108 T 12-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 M634_01465 d55b7b9f41e7a54fccf698f84cd63de1 242 Gene3D G3DSA:3.40.50.10090 32 161 2.2E-68 T 12-10-2018 M634_01465 d55b7b9f41e7a54fccf698f84cd63de1 242 SUPERFAMILY SSF69618 1 241 9.42E-52 T 12-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 M634_01465 d55b7b9f41e7a54fccf698f84cd63de1 242 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 236 7.0E-32 T 12-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 M634_01465 d55b7b9f41e7a54fccf698f84cd63de1 242 Gene3D G3DSA:3.40.50.10090 4 240 2.2E-68 T 12-10-2018 M634_06950 b3f0ec3178660bbaf4ca2a8a69e7eb43 663 Pfam PF06798 PrkA serine protein kinase C-terminal domain 402 655 1.8E-72 T 12-10-2018 IPR010650 PrkA C-terminal domain M634_06950 b3f0ec3178660bbaf4ca2a8a69e7eb43 663 SUPERFAMILY SSF52540 92 387 8.2E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_06950 b3f0ec3178660bbaf4ca2a8a69e7eb43 663 SMART SM00763 38 399 1.6E-220 T 12-10-2018 IPR013153 PrkA AAA domain M634_06950 b3f0ec3178660bbaf4ca2a8a69e7eb43 663 Pfam PF08298 PrkA AAA domain 38 399 1.7E-176 T 12-10-2018 IPR013153 PrkA AAA domain M634_06950 b3f0ec3178660bbaf4ca2a8a69e7eb43 663 PIRSF PIRSF000549 16 663 4.4E-290 T 12-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 M634_12525 463e79654f23b77efbd89cc6fbc6701b 201 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 5 26 5.9E-7 T 12-10-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17 M634_12525 463e79654f23b77efbd89cc6fbc6701b 201 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 32 201 4.2E-57 T 12-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 M634_12525 463e79654f23b77efbd89cc6fbc6701b 201 Gene3D G3DSA:3.40.50.300 11 201 5.6E-69 T 12-10-2018 M634_12525 463e79654f23b77efbd89cc6fbc6701b 201 SUPERFAMILY SSF52540 12 201 2.18E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_12525 463e79654f23b77efbd89cc6fbc6701b 201 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 29 201 2.0E-67 T 12-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 M634_12525 463e79654f23b77efbd89cc6fbc6701b 201 PIRSF PIRSF015617 6 201 2.2E-64 T 12-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 M634_21165 b99141e8e2e911c1a86e1bc18fb7bef9 316 Gene3D G3DSA:1.10.3470.10 4 315 2.5E-58 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M634_21165 b99141e8e2e911c1a86e1bc18fb7bef9 316 Pfam PF01032 FecCD transport family 24 312 4.6E-55 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 M634_21165 b99141e8e2e911c1a86e1bc18fb7bef9 316 SUPERFAMILY SSF81345 6 312 6.15E-59 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M634_20185 1e2eb3ed9625a8ce765a3c2029eb66d0 134 Gene3D G3DSA:3.30.70.1070 32 125 9.1E-20 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 M634_20185 1e2eb3ed9625a8ce765a3c2029eb66d0 134 Pfam PF05036 Sporulation related domain 43 117 1.1E-12 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 M634_20185 1e2eb3ed9625a8ce765a3c2029eb66d0 134 SUPERFAMILY SSF110997 43 110 1.1E-5 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 M634_18835 36f1efc880b24690de7582c4a79dd317 221 Gene3D G3DSA:1.10.10.10 119 220 1.1E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_18835 36f1efc880b24690de7582c4a79dd317 221 Gene3D G3DSA:3.40.50.2300 1 118 3.7E-34 T 12-10-2018 M634_18835 36f1efc880b24690de7582c4a79dd317 221 SUPERFAMILY SSF46894 140 215 1.25E-17 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M634_18835 36f1efc880b24690de7582c4a79dd317 221 SMART SM00448 2 112 1.7E-37 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_18835 36f1efc880b24690de7582c4a79dd317 221 Pfam PF00072 Response regulator receiver domain 4 112 2.9E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_18835 36f1efc880b24690de7582c4a79dd317 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 141 214 1.3E-17 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_18835 36f1efc880b24690de7582c4a79dd317 221 SMART SM00862 137 215 3.5E-15 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_18835 36f1efc880b24690de7582c4a79dd317 221 SUPERFAMILY SSF52172 2 128 1.37E-38 T 12-10-2018 IPR011006 CheY-like superfamily M634_22810 bf5217591a130863e8ea0972c452941c 443 PIRSF PIRSF004539 1 441 1.8E-185 T 12-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 M634_22810 bf5217591a130863e8ea0972c452941c 443 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 373 1.6E-149 T 12-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 M634_22810 bf5217591a130863e8ea0972c452941c 443 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 6 440 4.9E-147 T 12-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 M634_24600 92c1b7e748987e2f420704efcc9e1586 208 Pfam PF00005 ABC transporter 21 154 4.1E-19 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_24600 92c1b7e748987e2f420704efcc9e1586 208 SMART SM00382 25 203 9.2E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_24600 92c1b7e748987e2f420704efcc9e1586 208 Gene3D G3DSA:3.40.50.300 15 206 1.5E-38 T 12-10-2018 M634_24600 92c1b7e748987e2f420704efcc9e1586 208 SUPERFAMILY SSF52540 21 201 3.11E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_14955 30ce1ce80f69be7ca60c44adf95fe6ed 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 7.3E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M634_14955 30ce1ce80f69be7ca60c44adf95fe6ed 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 7.3E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M634_14955 30ce1ce80f69be7ca60c44adf95fe6ed 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 8.1E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M634_14955 30ce1ce80f69be7ca60c44adf95fe6ed 204 SUPERFAMILY SSF46689 8 84 8.48E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_14955 30ce1ce80f69be7ca60c44adf95fe6ed 204 SUPERFAMILY SSF48498 89 197 1.11E-10 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily M634_14955 30ce1ce80f69be7ca60c44adf95fe6ed 204 Gene3D G3DSA:1.10.357.10 1 204 3.1E-87 T 12-10-2018 M634_02425 85981035597c9e159fa68d50935ad766 545 SUPERFAMILY SSF111331 241 544 3.66E-55 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily M634_02425 85981035597c9e159fa68d50935ad766 545 SMART SM00195 90 232 1.0E-13 T 12-10-2018 IPR020422 Dual specificity protein phosphatase domain GO:0006470|GO:0008138 M634_02425 85981035597c9e159fa68d50935ad766 545 SMART SM00404 135 231 7.6E-4 T 12-10-2018 IPR003595 Protein-tyrosine phosphatase, catalytic M634_02425 85981035597c9e159fa68d50935ad766 545 Gene3D G3DSA:3.40.50.10330 237 365 2.2E-28 T 12-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 M634_02425 85981035597c9e159fa68d50935ad766 545 SUPERFAMILY SSF52799 84 227 7.62E-28 T 12-10-2018 IPR029021 Protein-tyrosine phosphatase-like M634_02425 85981035597c9e159fa68d50935ad766 545 Gene3D G3DSA:3.90.190.10 88 234 1.4E-26 T 12-10-2018 IPR029021 Protein-tyrosine phosphatase-like M634_02425 85981035597c9e159fa68d50935ad766 545 SMART SM00046 240 363 8.7E-5 T 12-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 M634_02425 85981035597c9e159fa68d50935ad766 545 Gene3D G3DSA:2.60.200.40 366 537 4.6E-26 T 12-10-2018 M634_02425 85981035597c9e159fa68d50935ad766 545 Pfam PF00782 Dual specificity phosphatase, catalytic domain 107 229 2.6E-17 T 12-10-2018 IPR000340 Dual specificity phosphatase, catalytic domain GO:0008138|GO:0016311 M634_02425 85981035597c9e159fa68d50935ad766 545 Pfam PF00781 Diacylglycerol kinase catalytic domain 242 365 1.0E-27 T 12-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 M634_07385 f0c5fa0d9556080208deb198c783263b 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 58 74 8.5E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M634_07385 f0c5fa0d9556080208deb198c783263b 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 94 110 8.5E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M634_07385 f0c5fa0d9556080208deb198c783263b 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 90 8.5E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M634_07385 f0c5fa0d9556080208deb198c783263b 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 124 144 8.5E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M634_07385 f0c5fa0d9556080208deb198c783263b 150 SUPERFAMILY SSF46785 9 145 2.82E-25 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_07385 f0c5fa0d9556080208deb198c783263b 150 SMART SM00347 34 134 4.3E-18 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M634_07385 f0c5fa0d9556080208deb198c783263b 150 ProSitePatterns PS01117 MarR-type HTH domain signature. 72 107 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site M634_07385 f0c5fa0d9556080208deb198c783263b 150 Pfam PF01047 MarR family 46 97 4.8E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M634_07385 f0c5fa0d9556080208deb198c783263b 150 Gene3D G3DSA:1.10.10.10 6 147 1.8E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_05710 664da7076007292cbb690a41af43aecc 290 Gene3D G3DSA:3.30.70.890 162 280 1.3E-29 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily M634_05710 664da7076007292cbb690a41af43aecc 290 SUPERFAMILY SSF55060 162 277 5.76E-36 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily M634_05710 664da7076007292cbb690a41af43aecc 290 SUPERFAMILY SSF54211 6 158 6.15E-44 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M634_05710 664da7076007292cbb690a41af43aecc 290 PIRSF PIRSF010376 4 280 1.3E-87 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 M634_05710 664da7076007292cbb690a41af43aecc 290 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 5 279 1.8E-95 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 M634_05710 664da7076007292cbb690a41af43aecc 290 Pfam PF00288 GHMP kinases N terminal domain 88 145 1.7E-9 T 12-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 M634_05710 664da7076007292cbb690a41af43aecc 290 Gene3D G3DSA:3.30.230.10 1 160 1.1E-53 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M634_05710 664da7076007292cbb690a41af43aecc 290 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 6 267 31.43 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 M634_05710 664da7076007292cbb690a41af43aecc 290 Pfam PF08544 GHMP kinases C terminal 204 260 1.2E-6 T 12-10-2018 IPR013750 GHMP kinase, C-terminal domain M634_13985 f906f65ac86428713f372396bb26d105 242 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 12-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 M634_13985 f906f65ac86428713f372396bb26d105 242 SUPERFAMILY SSF52313 6 232 9.03E-96 T 12-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily M634_13985 f906f65ac86428713f372396bb26d105 242 Gene3D G3DSA:1.10.287.610 103 150 9.5E-92 T 12-10-2018 M634_13985 f906f65ac86428713f372396bb26d105 242 Pfam PF00318 Ribosomal protein S2 9 224 1.3E-93 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_13985 f906f65ac86428713f372396bb26d105 242 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 12-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 M634_13985 f906f65ac86428713f372396bb26d105 242 Gene3D G3DSA:3.40.50.10490 8 219 9.5E-92 T 12-10-2018 M634_13985 f906f65ac86428713f372396bb26d105 242 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 2.3E-107 T 12-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_13985 f906f65ac86428713f372396bb26d105 242 PRINTS PR00395 Ribosomal protein S2 signature 158 175 4.1E-37 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_13985 f906f65ac86428713f372396bb26d105 242 PRINTS PR00395 Ribosomal protein S2 signature 196 210 4.1E-37 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_13985 f906f65ac86428713f372396bb26d105 242 PRINTS PR00395 Ribosomal protein S2 signature 37 46 4.1E-37 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_13985 f906f65ac86428713f372396bb26d105 242 PRINTS PR00395 Ribosomal protein S2 signature 175 186 4.1E-37 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_13985 f906f65ac86428713f372396bb26d105 242 PRINTS PR00395 Ribosomal protein S2 signature 6 24 4.1E-37 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_13985 f906f65ac86428713f372396bb26d105 242 PRINTS PR00395 Ribosomal protein S2 signature 87 104 4.1E-37 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_13985 f906f65ac86428713f372396bb26d105 242 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.122 T 12-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_12085 b75e4104587f37906339992331c4c47c 760 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 431 753 6.6E-149 T 12-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 M634_12085 b75e4104587f37906339992331c4c47c 760 Gene3D G3DSA:3.20.20.210 389 756 0.0 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 M634_12085 b75e4104587f37906339992331c4c47c 760 SUPERFAMILY SSF51726 396 757 2.09E-113 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 M634_12085 b75e4104587f37906339992331c4c47c 760 Gene3D G3DSA:3.20.20.210 7 524 0.0 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 M634_12085 b75e4104587f37906339992331c4c47c 760 SUPERFAMILY SSF51726 5 393 3.79E-109 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 M634_12085 b75e4104587f37906339992331c4c47c 760 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 758 35.991 T 12-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 M634_12085 b75e4104587f37906339992331c4c47c 760 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 315 1.7E-121 T 12-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 M634_12085 b75e4104587f37906339992331c4c47c 760 PIRSF PIRSF000382 2 760 0.0 T 12-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 M634_12085 b75e4104587f37906339992331c4c47c 760 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 758 0.0 T 12-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 M634_00330 13bdf0f2ca82a8f29c573001058f196e 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.8E-14 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 M634_00330 13bdf0f2ca82a8f29c573001058f196e 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site M634_00330 13bdf0f2ca82a8f29c573001058f196e 394 SUPERFAMILY SSF50447 205 301 3.73E-29 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily M634_00330 13bdf0f2ca82a8f29c573001058f196e 394 Gene3D G3DSA:2.40.30.10 206 334 1.8E-52 T 12-10-2018 M634_00330 13bdf0f2ca82a8f29c573001058f196e 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 1.0E-15 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 M634_00330 13bdf0f2ca82a8f29c573001058f196e 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 2.8E-33 T 12-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal M634_00330 13bdf0f2ca82a8f29c573001058f196e 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 2.1E-58 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_00330 13bdf0f2ca82a8f29c573001058f196e 394 SUPERFAMILY SSF50465 298 393 1.61E-35 T 12-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal M634_00330 13bdf0f2ca82a8f29c573001058f196e 394 Gene3D G3DSA:2.40.30.10 338 393 7.4E-29 T 12-10-2018 M634_00330 13bdf0f2ca82a8f29c573001058f196e 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.642 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 M634_00330 13bdf0f2ca82a8f29c573001058f196e 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 5.8E-231 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 M634_00330 13bdf0f2ca82a8f29c573001058f196e 394 Gene3D G3DSA:3.40.50.300 1 203 4.0E-70 T 12-10-2018 M634_00330 13bdf0f2ca82a8f29c573001058f196e 394 SUPERFAMILY SSF52540 6 219 5.86E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_00330 13bdf0f2ca82a8f29c573001058f196e 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.7E-23 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_00330 13bdf0f2ca82a8f29c573001058f196e 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.7E-23 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_00330 13bdf0f2ca82a8f29c573001058f196e 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-23 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_00330 13bdf0f2ca82a8f29c573001058f196e 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.7E-23 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_00330 13bdf0f2ca82a8f29c573001058f196e 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.7E-23 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_20405 a6d6dfd1f3c51a1695edfeb6ddfb521f 882 Pfam PF00512 His Kinase A (phospho-acceptor) domain 383 447 2.5E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_20405 a6d6dfd1f3c51a1695edfeb6ddfb521f 882 Gene3D G3DSA:1.10.287.130 348 445 1.5E-28 T 12-10-2018 M634_20405 a6d6dfd1f3c51a1695edfeb6ddfb521f 882 SUPERFAMILY SSF47384 367 448 5.49E-21 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M634_20405 a6d6dfd1f3c51a1695edfeb6ddfb521f 882 SMART SM00448 759 876 1.1E-33 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_20405 a6d6dfd1f3c51a1695edfeb6ddfb521f 882 Gene3D G3DSA:3.40.50.12330 751 816 4.3E-20 T 12-10-2018 M634_20405 a6d6dfd1f3c51a1695edfeb6ddfb521f 882 SUPERFAMILY SSF55874 436 607 1.83E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_20405 a6d6dfd1f3c51a1695edfeb6ddfb521f 882 SUPERFAMILY SSF52172 758 878 2.56E-35 T 12-10-2018 IPR011006 CheY-like superfamily M634_20405 a6d6dfd1f3c51a1695edfeb6ddfb521f 882 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 495 609 5.3E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_20405 a6d6dfd1f3c51a1695edfeb6ddfb521f 882 PRINTS PR00344 Bacterial sensor protein C-terminal signature 554 564 2.0E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_20405 a6d6dfd1f3c51a1695edfeb6ddfb521f 882 PRINTS PR00344 Bacterial sensor protein C-terminal signature 571 589 2.0E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_20405 a6d6dfd1f3c51a1695edfeb6ddfb521f 882 PRINTS PR00344 Bacterial sensor protein C-terminal signature 595 608 2.0E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_20405 a6d6dfd1f3c51a1695edfeb6ddfb521f 882 PRINTS PR00344 Bacterial sensor protein C-terminal signature 536 550 2.0E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_20405 a6d6dfd1f3c51a1695edfeb6ddfb521f 882 Gene3D G3DSA:3.40.50.2300 817 880 7.5E-18 T 12-10-2018 M634_20405 a6d6dfd1f3c51a1695edfeb6ddfb521f 882 Gene3D G3DSA:3.30.565.10 446 611 1.8E-48 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_20405 a6d6dfd1f3c51a1695edfeb6ddfb521f 882 SMART SM00387 494 611 4.5E-34 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_20405 a6d6dfd1f3c51a1695edfeb6ddfb521f 882 Pfam PF00072 Response regulator receiver domain 761 875 1.5E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_20405 a6d6dfd1f3c51a1695edfeb6ddfb521f 882 SMART SM00388 382 447 1.6E-24 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_20315 11497f202f2c695d7153b2b352a81366 181 ProSitePatterns PS00460 Glutathione peroxidases active site. 50 65 - T 12-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 M634_20315 11497f202f2c695d7153b2b352a81366 181 SUPERFAMILY SSF52833 40 181 4.86E-40 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M634_20315 11497f202f2c695d7153b2b352a81366 181 Pfam PF00255 Glutathione peroxidase 42 133 5.3E-26 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 M634_20315 11497f202f2c695d7153b2b352a81366 181 Gene3D G3DSA:3.40.30.10 26 181 3.3E-43 T 12-10-2018 M634_20315 11497f202f2c695d7153b2b352a81366 181 PIRSF PIRSF000303 2 181 1.3E-55 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 M634_20315 11497f202f2c695d7153b2b352a81366 181 PRINTS PR01011 Glutathione peroxidase family signature 143 152 3.5E-12 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 M634_20315 11497f202f2c695d7153b2b352a81366 181 PRINTS PR01011 Glutathione peroxidase family signature 48 65 3.5E-12 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 M634_20315 11497f202f2c695d7153b2b352a81366 181 PRINTS PR01011 Glutathione peroxidase family signature 83 99 3.5E-12 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 M634_23675 6c2a53f638482dba6546ee17044bcc75 298 Gene3D G3DSA:1.20.1510.10 9 214 5.0E-20 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily M634_23675 6c2a53f638482dba6546ee17044bcc75 298 SUPERFAMILY SSF161111 7 214 1.57E-32 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily M634_23675 6c2a53f638482dba6546ee17044bcc75 298 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 10 279 3.9E-27 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 M634_23675 6c2a53f638482dba6546ee17044bcc75 298 Pfam PF01545 Cation efflux family 13 214 7.5E-33 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 M634_17525 520edb2b3d4b49dd9e76045e5fa17da2 245 Pfam PF07670 Nucleoside recognition 85 179 7.0E-11 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 M634_07920 163942ad3a8640c2a05fa8d2aaa2c751 198 SMART SM00421 137 194 8.9E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_07920 163942ad3a8640c2a05fa8d2aaa2c751 198 SUPERFAMILY SSF52172 10 139 1.85E-31 T 12-10-2018 IPR011006 CheY-like superfamily M634_07920 163942ad3a8640c2a05fa8d2aaa2c751 198 Pfam PF00196 Bacterial regulatory proteins, luxR family 139 193 4.7E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_07920 163942ad3a8640c2a05fa8d2aaa2c751 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 182 1.4E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_07920 163942ad3a8640c2a05fa8d2aaa2c751 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 170 1.4E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_07920 163942ad3a8640c2a05fa8d2aaa2c751 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 140 154 1.4E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_07920 163942ad3a8640c2a05fa8d2aaa2c751 198 Pfam PF00072 Response regulator receiver domain 9 117 6.8E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_07920 163942ad3a8640c2a05fa8d2aaa2c751 198 SMART SM00448 6 117 1.1E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_07920 163942ad3a8640c2a05fa8d2aaa2c751 198 Gene3D G3DSA:3.40.50.2300 3 135 4.6E-35 T 12-10-2018 M634_07920 163942ad3a8640c2a05fa8d2aaa2c751 198 Gene3D G3DSA:1.10.10.10 138 196 1.3E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_07920 163942ad3a8640c2a05fa8d2aaa2c751 198 SUPERFAMILY SSF46894 134 193 2.62E-17 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M634_06370 2411e05576e0397ec9b37b9861271b6b 270 Gene3D G3DSA:3.40.50.300 1 260 1.2E-72 T 12-10-2018 M634_06370 2411e05576e0397ec9b37b9861271b6b 270 SUPERFAMILY SSF52540 1 268 7.57E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_06370 2411e05576e0397ec9b37b9861271b6b 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 3.3E-109 T 12-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 M634_06370 2411e05576e0397ec9b37b9861271b6b 270 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 227 1.9E-19 T 12-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain M634_06370 2411e05576e0397ec9b37b9861271b6b 270 PIRSF PIRSF003092 1 270 8.6E-94 T 12-10-2018 IPR025501 ATP binding protein MinD M634_06385 376c49a9641d283b27fe0c24f66c49a3 323 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 24 321 2.5E-111 T 12-10-2018 IPR011970 Lytic murein transglycosylase M634_06385 376c49a9641d283b27fe0c24f66c49a3 323 Pfam PF13406 Transglycosylase SLT domain 24 319 9.5E-111 T 12-10-2018 IPR031304 Transglycosylase SLT domain 2 M634_06385 376c49a9641d283b27fe0c24f66c49a3 323 Gene3D G3DSA:1.10.530.10 66 318 3.7E-93 T 12-10-2018 M634_06385 376c49a9641d283b27fe0c24f66c49a3 323 Gene3D G3DSA:1.10.8.350 35 199 3.7E-93 T 12-10-2018 M634_06385 376c49a9641d283b27fe0c24f66c49a3 323 SUPERFAMILY SSF53955 12 321 3.02E-101 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily M634_19070 d901db9f874827689889912d6dcab408 203 Pfam PF11140 Protein of unknown function (DUF2913) 13 193 1.1E-49 T 12-10-2018 IPR021316 Protein of unknown function DUF2913 M634_21400 9d38ffafbe6191291b01645f74508a90 682 Gene3D G3DSA:3.30.565.10 268 416 7.2E-29 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_21400 9d38ffafbe6191291b01645f74508a90 682 SUPERFAMILY SSF47384 170 210 8.44E-5 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M634_21400 9d38ffafbe6191291b01645f74508a90 682 Gene3D G3DSA:1.10.287.130 168 264 2.7E-5 T 12-10-2018 M634_21400 9d38ffafbe6191291b01645f74508a90 682 Pfam PF00072 Response regulator receiver domain 566 678 4.2E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_21400 9d38ffafbe6191291b01645f74508a90 682 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 309 411 8.2E-18 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_21400 9d38ffafbe6191291b01645f74508a90 682 SMART SM00448 564 678 5.7E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_21400 9d38ffafbe6191291b01645f74508a90 682 SMART SM00387 306 414 7.7E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_21400 9d38ffafbe6191291b01645f74508a90 682 SUPERFAMILY SSF52172 564 682 1.32E-34 T 12-10-2018 IPR011006 CheY-like superfamily M634_21400 9d38ffafbe6191291b01645f74508a90 682 Gene3D G3DSA:3.40.50.2300 559 682 1.2E-35 T 12-10-2018 M634_21400 9d38ffafbe6191291b01645f74508a90 682 PRINTS PR00344 Bacterial sensor protein C-terminal signature 344 358 3.1E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_21400 9d38ffafbe6191291b01645f74508a90 682 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 411 3.1E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_21400 9d38ffafbe6191291b01645f74508a90 682 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 392 3.1E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_21400 9d38ffafbe6191291b01645f74508a90 682 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 372 3.1E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_21400 9d38ffafbe6191291b01645f74508a90 682 SUPERFAMILY SSF55874 251 415 1.15E-31 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_20605 6e3e8f6d8816c51030706e69f346c794 375 SUPERFAMILY SSF111369 49 290 5.49E-63 T 12-10-2018 M634_20605 6e3e8f6d8816c51030706e69f346c794 375 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 53 283 2.6E-14 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M634_20605 6e3e8f6d8816c51030706e69f346c794 375 Gene3D G3DSA:2.40.50.100 58 201 1.4E-74 T 12-10-2018 M634_20605 6e3e8f6d8816c51030706e69f346c794 375 Gene3D G3DSA:2.40.30.170 52 276 1.4E-74 T 12-10-2018 M634_20605 6e3e8f6d8816c51030706e69f346c794 375 Gene3D G3DSA:1.10.287.470 93 166 1.4E-74 T 12-10-2018 M634_20605 6e3e8f6d8816c51030706e69f346c794 375 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 368 1.1E-84 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 M634_20605 6e3e8f6d8816c51030706e69f346c794 375 Gene3D G3DSA:2.40.420.20 277 368 1.9E-21 T 12-10-2018 M634_09415 7c9f09a376427ba6a4c32e468b56b71a 598 Gene3D G3DSA:1.20.1560.10 2 345 5.6E-56 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M634_09415 7c9f09a376427ba6a4c32e468b56b71a 598 ProSitePatterns PS00211 ABC transporters family signature. 496 510 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_09415 7c9f09a376427ba6a4c32e468b56b71a 598 Pfam PF00664 ABC transporter transmembrane region 25 312 5.3E-30 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 M634_09415 7c9f09a376427ba6a4c32e468b56b71a 598 SMART SM00382 385 572 3.1E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_09415 7c9f09a376427ba6a4c32e468b56b71a 598 Pfam PF00005 ABC transporter 376 524 2.9E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_09415 7c9f09a376427ba6a4c32e468b56b71a 598 SUPERFAMILY SSF90123 12 343 1.7E-57 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M634_09415 7c9f09a376427ba6a4c32e468b56b71a 598 Gene3D G3DSA:3.40.50.300 351 598 9.9E-81 T 12-10-2018 M634_09415 7c9f09a376427ba6a4c32e468b56b71a 598 SUPERFAMILY SSF52540 356 591 9.09E-80 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_07645 9db99d5a4940fda880a67fa8bdb22e39 167 Pfam PF02810 SEC-C motif 4 18 1.6E-4 T 12-10-2018 IPR004027 SEC-C motif M634_07645 9db99d5a4940fda880a67fa8bdb22e39 167 Pfam PF02810 SEC-C motif 150 167 4.9E-10 T 12-10-2018 IPR004027 SEC-C motif M634_07645 9db99d5a4940fda880a67fa8bdb22e39 167 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 1 127 26.054 T 12-10-2018 IPR023006 Uncharacterised protein family UPF0225 M634_07645 9db99d5a4940fda880a67fa8bdb22e39 167 SUPERFAMILY SSF103642 147 167 3.6E-8 T 12-10-2018 M634_07645 9db99d5a4940fda880a67fa8bdb22e39 167 SUPERFAMILY SSF54427 28 128 7.89E-34 T 12-10-2018 IPR032710 NTF2-like domain superfamily M634_07645 9db99d5a4940fda880a67fa8bdb22e39 167 Gene3D G3DSA:3.10.450.50 1 167 1.6E-54 T 12-10-2018 M634_01850 d979041072884e9e71b07b5e6728e1a6 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 43 3.8E-26 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_01850 d979041072884e9e71b07b5e6728e1a6 44 Pfam PF00468 Ribosomal protein L34 1 43 4.9E-24 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_01850 d979041072884e9e71b07b5e6728e1a6 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.4 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_01850 d979041072884e9e71b07b5e6728e1a6 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 12-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_01850 d979041072884e9e71b07b5e6728e1a6 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 39 1.0E-14 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_04680 787d13c885a275ea490db3cf47a611b1 857 Gene3D G3DSA:3.40.50.300 158 347 7.3E-75 T 12-10-2018 M634_04680 787d13c885a275ea490db3cf47a611b1 857 SUPERFAMILY SSF52540 546 852 1.24E-84 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_04680 787d13c885a275ea490db3cf47a611b1 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 1.9E-11 T 12-10-2018 IPR004176 Clp, N-terminal M634_04680 787d13c885a275ea490db3cf47a611b1 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 7.4E-14 T 12-10-2018 IPR004176 Clp, N-terminal M634_04680 787d13c885a275ea490db3cf47a611b1 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 3.9E-57 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 M634_04680 787d13c885a275ea490db3cf47a611b1 857 Gene3D G3DSA:1.10.1780.10 1 148 1.3E-32 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 M634_04680 787d13c885a275ea490db3cf47a611b1 857 Gene3D G3DSA:3.40.50.300 550 764 2.2E-89 T 12-10-2018 M634_04680 787d13c885a275ea490db3cf47a611b1 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 853 0.0 T 12-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 M634_04680 787d13c885a275ea490db3cf47a611b1 857 SMART SM01086 766 855 7.9E-37 T 12-10-2018 IPR019489 Clp ATPase, C-terminal M634_04680 787d13c885a275ea490db3cf47a611b1 857 SUPERFAMILY SSF52540 159 545 5.25E-101 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_04680 787d13c885a275ea490db3cf47a611b1 857 SMART SM00382 198 344 3.0E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_04680 787d13c885a275ea490db3cf47a611b1 857 SMART SM00382 597 767 1.1E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_04680 787d13c885a275ea490db3cf47a611b1 857 Gene3D G3DSA:3.40.50.300 348 544 1.4E-67 T 12-10-2018 M634_04680 787d13c885a275ea490db3cf47a611b1 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 3.7E-28 T 12-10-2018 IPR019489 Clp ATPase, C-terminal M634_04680 787d13c885a275ea490db3cf47a611b1 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 4.3E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 M634_04680 787d13c885a275ea490db3cf47a611b1 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 4.3E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 M634_04680 787d13c885a275ea490db3cf47a611b1 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 4.3E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 M634_04680 787d13c885a275ea490db3cf47a611b1 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 4.3E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 M634_04680 787d13c885a275ea490db3cf47a611b1 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 320 2.4E-13 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 M634_04680 787d13c885a275ea490db3cf47a611b1 857 SUPERFAMILY SSF81923 4 156 1.08E-42 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 M634_04680 787d13c885a275ea490db3cf47a611b1 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 12-10-2018 IPR028299 ClpA/B, conserved site 2 M634_04680 787d13c885a275ea490db3cf47a611b1 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 M634_04680 787d13c885a275ea490db3cf47a611b1 857 Gene3D G3DSA:1.10.8.60 766 857 9.3E-28 T 12-10-2018 M634_04230 fd466c4eb70781c31dc6c17bbe1575a7 908 SUPERFAMILY SSF52540 418 610 4.73E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_04230 fd466c4eb70781c31dc6c17bbe1575a7 908 Pfam PF07517 SecA DEAD-like domain 7 403 7.7E-134 T 12-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 M634_04230 fd466c4eb70781c31dc6c17bbe1575a7 908 SMART SM00957 6 403 0.0 T 12-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 M634_04230 fd466c4eb70781c31dc6c17bbe1575a7 908 Pfam PF07516 SecA Wing and Scaffold domain 617 829 2.5E-66 T 12-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 M634_04230 fd466c4eb70781c31dc6c17bbe1575a7 908 SUPERFAMILY SSF52540 5 416 2.56E-85 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_04230 fd466c4eb70781c31dc6c17bbe1575a7 908 Gene3D G3DSA:3.40.50.300 22 416 1.0E-176 T 12-10-2018 M634_04230 fd466c4eb70781c31dc6c17bbe1575a7 908 Gene3D G3DSA:3.40.50.300 418 620 2.2E-87 T 12-10-2018 M634_04230 fd466c4eb70781c31dc6c17bbe1575a7 908 Pfam PF01043 SecA preprotein cross-linking domain 232 359 1.3E-38 T 12-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 M634_04230 fd466c4eb70781c31dc6c17bbe1575a7 908 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 816 0.0 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 M634_04230 fd466c4eb70781c31dc6c17bbe1575a7 908 Pfam PF02810 SEC-C motif 888 906 2.0E-10 T 12-10-2018 IPR004027 SEC-C motif M634_04230 fd466c4eb70781c31dc6c17bbe1575a7 908 ProSitePatterns PS01312 SecA family signature. 501 516 - T 12-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 M634_04230 fd466c4eb70781c31dc6c17bbe1575a7 908 SUPERFAMILY SSF81767 227 369 1.16E-42 T 12-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 M634_04230 fd466c4eb70781c31dc6c17bbe1575a7 908 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 20.082 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 M634_04230 fd466c4eb70781c31dc6c17bbe1575a7 908 Gene3D G3DSA:3.90.1440.10 229 369 1.0E-176 T 12-10-2018 M634_04230 fd466c4eb70781c31dc6c17bbe1575a7 908 SUPERFAMILY SSF81886 620 896 1.06E-83 T 12-10-2018 IPR036266 SecA, Wing/Scaffold superfamily M634_04230 fd466c4eb70781c31dc6c17bbe1575a7 908 Gene3D G3DSA:1.10.3060.10 621 833 4.9E-76 T 12-10-2018 M634_04230 fd466c4eb70781c31dc6c17bbe1575a7 908 PRINTS PR00906 SecA protein signature 101 115 3.2E-72 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 M634_04230 fd466c4eb70781c31dc6c17bbe1575a7 908 PRINTS PR00906 SecA protein signature 414 427 3.2E-72 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 M634_04230 fd466c4eb70781c31dc6c17bbe1575a7 908 PRINTS PR00906 SecA protein signature 117 127 3.2E-72 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 M634_04230 fd466c4eb70781c31dc6c17bbe1575a7 908 PRINTS PR00906 SecA protein signature 170 190 3.2E-72 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 M634_04230 fd466c4eb70781c31dc6c17bbe1575a7 908 PRINTS PR00906 SecA protein signature 340 362 3.2E-72 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 M634_04230 fd466c4eb70781c31dc6c17bbe1575a7 908 PRINTS PR00906 SecA protein signature 377 394 3.2E-72 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 M634_04230 fd466c4eb70781c31dc6c17bbe1575a7 908 PRINTS PR00906 SecA protein signature 63 87 3.2E-72 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 M634_04230 fd466c4eb70781c31dc6c17bbe1575a7 908 SMART SM00958 228 359 2.8E-82 T 12-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 M634_17145 db43fd12cf4df90727a16a77a0dea7d1 340 SUPERFAMILY SSF103088 192 312 2.88E-28 T 12-10-2018 IPR036737 OmpA-like domain superfamily M634_17145 db43fd12cf4df90727a16a77a0dea7d1 340 PRINTS PR01021 OMPA domain signature 243 258 6.8E-10 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M634_17145 db43fd12cf4df90727a16a77a0dea7d1 340 PRINTS PR01021 OMPA domain signature 258 274 6.8E-10 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M634_17145 db43fd12cf4df90727a16a77a0dea7d1 340 PRINTS PR01021 OMPA domain signature 212 234 6.8E-10 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M634_17145 db43fd12cf4df90727a16a77a0dea7d1 340 Gene3D G3DSA:2.60.40.2540 54 199 3.4E-14 T 12-10-2018 M634_17145 db43fd12cf4df90727a16a77a0dea7d1 340 Pfam PF00691 OmpA family 212 307 3.2E-19 T 12-10-2018 IPR006665 OmpA-like domain M634_17145 db43fd12cf4df90727a16a77a0dea7d1 340 Gene3D G3DSA:3.30.1330.60 202 324 2.2E-29 T 12-10-2018 IPR036737 OmpA-like domain superfamily M634_17145 db43fd12cf4df90727a16a77a0dea7d1 340 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 73 91 7.2E-9 T 12-10-2018 M634_17145 db43fd12cf4df90727a16a77a0dea7d1 340 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 111 129 7.2E-9 T 12-10-2018 M634_17145 db43fd12cf4df90727a16a77a0dea7d1 340 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 229 255 7.2E-9 T 12-10-2018 M634_17145 db43fd12cf4df90727a16a77a0dea7d1 340 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 296 316 7.2E-9 T 12-10-2018 M634_17145 db43fd12cf4df90727a16a77a0dea7d1 340 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 276 295 7.2E-9 T 12-10-2018 M634_14530 1744ad7e63e0b7733cb46493101bbb7a 326 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 103 310 2.5E-83 T 12-10-2018 M634_14530 1744ad7e63e0b7733cb46493101bbb7a 326 Gene3D G3DSA:1.10.150.210 115 177 8.2E-169 T 12-10-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 M634_14530 1744ad7e63e0b7733cb46493101bbb7a 326 SUPERFAMILY SSF56784 107 310 1.93E-49 T 12-10-2018 IPR036412 HAD-like superfamily M634_14530 1744ad7e63e0b7733cb46493101bbb7a 326 Pfam PF00702 haloacid dehalogenase-like hydrolase 107 279 5.7E-15 T 12-10-2018 M634_14530 1744ad7e63e0b7733cb46493101bbb7a 326 Gene3D G3DSA:3.40.50.1000 2 310 8.2E-169 T 12-10-2018 IPR023214 HAD superfamily M634_14530 1744ad7e63e0b7733cb46493101bbb7a 326 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 107 277 9.1E-29 T 12-10-2018 M634_14530 1744ad7e63e0b7733cb46493101bbb7a 326 Gene3D G3DSA:3.30.70.2020 8 322 8.2E-169 T 12-10-2018 M634_13380 86c8de62c11376f1712beebf6c510230 174 SUPERFAMILY SSF52218 1 170 3.14E-35 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M634_13380 86c8de62c11376f1712beebf6c510230 174 Gene3D G3DSA:3.40.50.360 1 174 3.3E-32 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M634_13380 86c8de62c11376f1712beebf6c510230 174 Pfam PF03358 NADPH-dependent FMN reductase 1 132 6.1E-26 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 M634_24450 952e0928da190867572eb3066862f40b 133 Pfam PF02230 Phospholipase/Carboxylesterase 12 125 3.8E-12 T 12-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 M634_24450 952e0928da190867572eb3066862f40b 133 SUPERFAMILY SSF53474 4 130 5.21E-21 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_24450 952e0928da190867572eb3066862f40b 133 Gene3D G3DSA:3.40.50.1820 1 133 1.5E-28 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_00430 226ad5b10ad81930190a037fe9085522 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 2.8E-69 T 12-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 M634_00430 226ad5b10ad81930190a037fe9085522 289 SUPERFAMILY SSF52540 4 286 3.5E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_00430 226ad5b10ad81930190a037fe9085522 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 1.2E-27 T 12-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 M634_00430 226ad5b10ad81930190a037fe9085522 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 1.2E-27 T 12-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 M634_00430 226ad5b10ad81930190a037fe9085522 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 1.2E-27 T 12-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 M634_00430 226ad5b10ad81930190a037fe9085522 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 1.2E-27 T 12-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 M634_00430 226ad5b10ad81930190a037fe9085522 289 Gene3D G3DSA:3.40.50.300 1 289 8.5E-111 T 12-10-2018 M634_00375 ce53bbdf0e6ecd802458754187dc351f 328 Pfam PF13360 PQQ-like domain 170 286 8.6E-6 T 12-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat M634_00375 ce53bbdf0e6ecd802458754187dc351f 328 SMART SM00320 151 189 2.1E-5 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 M634_00375 ce53bbdf0e6ecd802458754187dc351f 328 SMART SM00320 285 323 170.0 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 M634_00375 ce53bbdf0e6ecd802458754187dc351f 328 SMART SM00320 233 274 0.25 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 M634_00375 ce53bbdf0e6ecd802458754187dc351f 328 SMART SM00320 192 230 0.1 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 M634_00375 ce53bbdf0e6ecd802458754187dc351f 328 SMART SM00320 68 106 5.3 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 M634_00375 ce53bbdf0e6ecd802458754187dc351f 328 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 176 190 - T 12-10-2018 IPR019775 WD40 repeat, conserved site M634_00375 ce53bbdf0e6ecd802458754187dc351f 328 SUPERFAMILY SSF50998 28 328 1.8E-45 T 12-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily M634_00375 ce53bbdf0e6ecd802458754187dc351f 328 Gene3D G3DSA:2.130.10.10 11 114 2.9E-6 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 M634_00375 ce53bbdf0e6ecd802458754187dc351f 328 Gene3D G3DSA:2.130.10.10 115 328 1.9E-36 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 M634_24270 27cb27fb456b1c30654c9ef654a6e41e 721 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 11 721 0.0 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 M634_24270 27cb27fb456b1c30654c9ef654a6e41e 721 Gene3D G3DSA:1.10.420.20 191 397 1.2E-214 T 12-10-2018 M634_24270 27cb27fb456b1c30654c9ef654a6e41e 721 SUPERFAMILY SSF48113 432 721 8.4E-112 T 12-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 M634_24270 27cb27fb456b1c30654c9ef654a6e41e 721 SUPERFAMILY SSF48113 19 431 3.24E-150 T 12-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 M634_24270 27cb27fb456b1c30654c9ef654a6e41e 721 Pfam PF00141 Peroxidase 80 397 1.2E-50 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 M634_24270 27cb27fb456b1c30654c9ef654a6e41e 721 Pfam PF00141 Peroxidase 404 698 6.3E-37 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 M634_24270 27cb27fb456b1c30654c9ef654a6e41e 721 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 67 92 8.2E-53 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 M634_24270 27cb27fb456b1c30654c9ef654a6e41e 721 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 52 65 8.2E-53 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 M634_24270 27cb27fb456b1c30654c9ef654a6e41e 721 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 478 504 8.2E-53 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 M634_24270 27cb27fb456b1c30654c9ef654a6e41e 721 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 267 290 8.2E-53 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 M634_24270 27cb27fb456b1c30654c9ef654a6e41e 721 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 26 48 8.2E-53 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 M634_24270 27cb27fb456b1c30654c9ef654a6e41e 721 PRINTS PR00458 Haem peroxidase superfamily signature 90 104 3.6E-18 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 M634_24270 27cb27fb456b1c30654c9ef654a6e41e 721 PRINTS PR00458 Haem peroxidase superfamily signature 318 333 3.6E-18 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 M634_24270 27cb27fb456b1c30654c9ef654a6e41e 721 PRINTS PR00458 Haem peroxidase superfamily signature 150 167 3.6E-18 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 M634_24270 27cb27fb456b1c30654c9ef654a6e41e 721 PRINTS PR00458 Haem peroxidase superfamily signature 168 180 3.6E-18 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 M634_24270 27cb27fb456b1c30654c9ef654a6e41e 721 PRINTS PR00458 Haem peroxidase superfamily signature 259 274 3.6E-18 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 M634_24270 27cb27fb456b1c30654c9ef654a6e41e 721 Gene3D G3DSA:1.10.520.10 433 721 2.3E-145 T 12-10-2018 M634_24270 27cb27fb456b1c30654c9ef654a6e41e 721 Hamap MF_01961 Catalase-peroxidase [katG]. 7 721 39.212 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 M634_24270 27cb27fb456b1c30654c9ef654a6e41e 721 Gene3D G3DSA:1.10.420.10 578 699 2.3E-145 T 12-10-2018 M634_24270 27cb27fb456b1c30654c9ef654a6e41e 721 Gene3D G3DSA:1.10.520.10 28 432 1.2E-214 T 12-10-2018 M634_24270 27cb27fb456b1c30654c9ef654a6e41e 721 ProSitePatterns PS00436 Peroxidases active site signature. 90 101 - T 12-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 M634_09205 37368f32f9d1ca6d802084ba876de7fb 164 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 20 155 2.4E-16 T 12-10-2018 IPR009936 Protein of unknown function DUF1468 M634_12585 79baa7bd7bdab08e866704362d3fb332 608 SUPERFAMILY SSF81296 1 109 3.85E-18 T 12-10-2018 IPR014756 Immunoglobulin E-set M634_12585 79baa7bd7bdab08e866704362d3fb332 608 SMART SM00642 126 518 4.7E-84 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 M634_12585 79baa7bd7bdab08e866704362d3fb332 608 Pfam PF00128 Alpha amylase, catalytic domain 175 491 4.6E-77 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 M634_12585 79baa7bd7bdab08e866704362d3fb332 608 PIRSF PIRSF036918 1 608 6.9E-262 T 12-10-2018 IPR017069 Maltodextrin glucosidase GO:0004558|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.20|KEGG: 00500+3.2.1.20|MetaCyc: PWY-842 M634_12585 79baa7bd7bdab08e866704362d3fb332 608 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 8 104 1.2E-5 T 12-10-2018 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 M634_12585 79baa7bd7bdab08e866704362d3fb332 608 SUPERFAMILY SSF51011 527 607 1.49E-11 T 12-10-2018 M634_12585 79baa7bd7bdab08e866704362d3fb332 608 Gene3D G3DSA:2.60.40.10 6 112 2.4E-5 T 12-10-2018 IPR013783 Immunoglobulin-like fold M634_12585 79baa7bd7bdab08e866704362d3fb332 608 Gene3D G3DSA:3.20.20.80 114 520 1.5E-135 T 12-10-2018 M634_12585 79baa7bd7bdab08e866704362d3fb332 608 Gene3D G3DSA:2.60.40.1180 521 607 1.4E-15 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta M634_12585 79baa7bd7bdab08e866704362d3fb332 608 SUPERFAMILY SSF51445 113 527 1.59E-95 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M634_15400 a00383fd201c0c34d1b39323e16b1c78 163 Pfam PF04073 Aminoacyl-tRNA editing domain 42 149 2.3E-16 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 M634_15400 a00383fd201c0c34d1b39323e16b1c78 163 SUPERFAMILY SSF55826 12 154 5.89E-30 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 M634_15400 a00383fd201c0c34d1b39323e16b1c78 163 Gene3D G3DSA:3.90.960.10 11 162 6.2E-22 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 M634_06785 d142b4bb2b936f4fe374aa822e8a5ff7 100 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 4 83 2.8E-24 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 M634_06785 d142b4bb2b936f4fe374aa822e8a5ff7 100 SUPERFAMILY SSF46767 2 84 3.27E-25 T 12-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 M634_06785 d142b4bb2b936f4fe374aa822e8a5ff7 100 Gene3D G3DSA:1.10.10.10 1 100 5.3E-40 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_24000 153789ce64093a54d93a5a52a33726a1 248 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 2 245 52.068 T 12-10-2018 IPR023710 Probable phosphatase YcdX GO:0008270 M634_24000 153789ce64093a54d93a5a52a33726a1 248 Gene3D G3DSA:3.20.20.140 3 247 6.9E-63 T 12-10-2018 M634_24000 153789ce64093a54d93a5a52a33726a1 248 SMART SM00481 5 79 1.2E-8 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal M634_24000 153789ce64093a54d93a5a52a33726a1 248 SUPERFAMILY SSF89550 4 244 2.09E-60 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 M634_02590 233bdfd3694b3422b0388ab0324ec5b6 348 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 121 4.1E-7 T 12-10-2018 IPR000014 PAS domain M634_02590 233bdfd3694b3422b0388ab0324ec5b6 348 Gene3D G3DSA:3.30.565.10 192 348 1.2E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_02590 233bdfd3694b3422b0388ab0324ec5b6 348 SMART SM00388 129 194 3.0E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_02590 233bdfd3694b3422b0388ab0324ec5b6 348 SUPERFAMILY SSF55785 8 102 8.9E-9 T 12-10-2018 IPR035965 PAS domain superfamily M634_02590 233bdfd3694b3422b0388ab0324ec5b6 348 SUPERFAMILY SSF47384 125 190 2.16E-12 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M634_02590 233bdfd3694b3422b0388ab0324ec5b6 348 SMART SM00091 4 72 1.5E-7 T 12-10-2018 IPR000014 PAS domain M634_02590 233bdfd3694b3422b0388ab0324ec5b6 348 SMART SM00387 233 348 2.5E-31 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_02590 233bdfd3694b3422b0388ab0324ec5b6 348 Pfam PF00989 PAS fold 7 111 2.6E-16 T 12-10-2018 IPR013767 PAS fold GO:0006355 M634_02590 233bdfd3694b3422b0388ab0324ec5b6 348 Gene3D G3DSA:3.30.450.20 1 112 2.1E-28 T 12-10-2018 M634_02590 233bdfd3694b3422b0388ab0324ec5b6 348 Gene3D G3DSA:1.10.287.130 114 191 1.3E-13 T 12-10-2018 M634_02590 233bdfd3694b3422b0388ab0324ec5b6 348 Pfam PF00512 His Kinase A (phospho-acceptor) domain 133 189 2.9E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_02590 233bdfd3694b3422b0388ab0324ec5b6 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 311 329 1.3E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_02590 233bdfd3694b3422b0388ab0324ec5b6 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 282 296 1.3E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_02590 233bdfd3694b3422b0388ab0324ec5b6 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 347 1.3E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_02590 233bdfd3694b3422b0388ab0324ec5b6 348 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 347 4.0E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_02590 233bdfd3694b3422b0388ab0324ec5b6 348 SUPERFAMILY SSF55874 198 347 1.3E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_14185 3d8326e167c6de9e3e26006fff319c5a 194 Pfam PF04542 Sigma-70 region 2 34 99 4.0E-17 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 M634_14185 3d8326e167c6de9e3e26006fff319c5a 194 SUPERFAMILY SSF88659 127 189 1.35E-14 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like M634_14185 3d8326e167c6de9e3e26006fff319c5a 194 Pfam PF04545 Sigma-70, region 4 139 187 1.4E-13 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 M634_14185 3d8326e167c6de9e3e26006fff319c5a 194 Gene3D G3DSA:1.10.10.10 103 191 4.4E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_14185 3d8326e167c6de9e3e26006fff319c5a 194 Gene3D G3DSA:1.10.1740.10 13 96 6.7E-24 T 12-10-2018 M634_14185 3d8326e167c6de9e3e26006fff319c5a 194 SUPERFAMILY SSF88946 8 118 3.14E-26 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 M634_14185 3d8326e167c6de9e3e26006fff319c5a 194 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 27 188 2.5E-30 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 M634_07765 14969c5bd594a9abc5da7c9d6cbb065d 320 Gene3D G3DSA:1.10.3720.10 69 308 3.4E-23 T 12-10-2018 IPR035906 MetI-like superfamily M634_07765 14969c5bd594a9abc5da7c9d6cbb065d 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 314 1.8E-42 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_07765 14969c5bd594a9abc5da7c9d6cbb065d 320 SUPERFAMILY SSF161098 69 298 1.18E-19 T 12-10-2018 IPR035906 MetI-like superfamily M634_05940 ccf936d351bd4ffecb37b5e94aeacafd 384 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.1E-42 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 M634_05940 ccf936d351bd4ffecb37b5e94aeacafd 384 Gene3D G3DSA:3.30.70.2120 174 282 6.8E-76 T 12-10-2018 M634_05940 ccf936d351bd4ffecb37b5e94aeacafd 384 Gene3D G3DSA:1.20.1330.10 44 333 6.8E-76 T 12-10-2018 M634_05940 ccf936d351bd4ffecb37b5e94aeacafd 384 Pfam PF07196 Flagellin hook IN motif 195 252 1.2E-10 T 12-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 M634_05940 ccf936d351bd4ffecb37b5e94aeacafd 384 PRINTS PR00207 Flagellin signature 111 134 2.4E-24 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 M634_05940 ccf936d351bd4ffecb37b5e94aeacafd 384 PRINTS PR00207 Flagellin signature 37 54 2.4E-24 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 M634_05940 ccf936d351bd4ffecb37b5e94aeacafd 384 PRINTS PR00207 Flagellin signature 76 95 2.4E-24 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 M634_05940 ccf936d351bd4ffecb37b5e94aeacafd 384 SUPERFAMILY SSF64518 1 384 3.14E-97 T 12-10-2018 M634_05940 ccf936d351bd4ffecb37b5e94aeacafd 384 Pfam PF00700 Bacterial flagellin C-terminal helical region 299 383 3.3E-26 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 M634_05940 ccf936d351bd4ffecb37b5e94aeacafd 384 Gene3D G3DSA:1.10.8.410 334 384 1.4E-21 T 12-10-2018 M634_03555 42c6aeb2c60ae873a4027cb000a4f509 452 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 449 59.42 T 12-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 M634_03555 42c6aeb2c60ae873a4027cb000a4f509 452 Gene3D G3DSA:3.90.190.20 314 450 1.6E-32 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 M634_03555 42c6aeb2c60ae873a4027cb000a4f509 452 Pfam PF01225 Mur ligase family, catalytic domain 2 101 3.2E-18 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 M634_03555 42c6aeb2c60ae873a4027cb000a4f509 452 SUPERFAMILY SSF53623 97 308 3.14E-53 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 M634_03555 42c6aeb2c60ae873a4027cb000a4f509 452 Pfam PF08245 Mur ligase middle domain 108 291 2.2E-22 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 M634_03555 42c6aeb2c60ae873a4027cb000a4f509 452 SUPERFAMILY SSF51984 1 89 1.31E-22 T 12-10-2018 M634_03555 42c6aeb2c60ae873a4027cb000a4f509 452 Gene3D G3DSA:3.40.1190.10 91 313 1.5E-57 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 M634_03555 42c6aeb2c60ae873a4027cb000a4f509 452 Gene3D G3DSA:3.40.50.720 1 90 9.1E-36 T 12-10-2018 M634_03555 42c6aeb2c60ae873a4027cb000a4f509 452 SUPERFAMILY SSF53244 311 448 6.11E-38 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 M634_03555 42c6aeb2c60ae873a4027cb000a4f509 452 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 386 3.8E-11 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 M634_03555 42c6aeb2c60ae873a4027cb000a4f509 452 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 6.9E-260 T 12-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 M634_08765 6514d63a6b385965ceefed96d79c2e90 403 Gene3D G3DSA:1.10.3210.10 11 328 4.6E-70 T 12-10-2018 M634_08765 6514d63a6b385965ceefed96d79c2e90 403 SMART SM00471 161 297 2.9E-9 T 12-10-2018 IPR003607 HD/PDEase domain M634_08765 6514d63a6b385965ceefed96d79c2e90 403 Pfam PF11871 Domain of unknown function (DUF3391) 9 133 4.8E-18 T 12-10-2018 IPR021812 Protein of unknown function DUF3391 M634_08765 6514d63a6b385965ceefed96d79c2e90 403 SUPERFAMILY SSF109604 156 327 2.42E-32 T 12-10-2018 M634_08765 6514d63a6b385965ceefed96d79c2e90 403 Pfam PF01966 HD domain 166 287 1.0E-13 T 12-10-2018 IPR006674 HD domain M634_10075 23010a44ba71d554f606b9ee126c3b4a 165 Gene3D G3DSA:3.30.70.20 42 94 2.1E-10 T 12-10-2018 M634_10075 23010a44ba71d554f606b9ee126c3b4a 165 SUPERFAMILY SSF54862 41 162 6.16E-19 T 12-10-2018 M634_10075 23010a44ba71d554f606b9ee126c3b4a 165 Pfam PF12838 4Fe-4S dicluster domain 117 156 3.1E-6 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M634_10075 23010a44ba71d554f606b9ee126c3b4a 165 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 47 58 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M634_10075 23010a44ba71d554f606b9ee126c3b4a 165 Pfam PF13237 4Fe-4S dicluster domain 46 88 6.9E-7 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M634_10075 23010a44ba71d554f606b9ee126c3b4a 165 Gene3D G3DSA:3.30.70.20 104 160 5.7E-10 T 12-10-2018 M634_18580 faf292a44f633d4a49cde538fffefb2c 414 SUPERFAMILY SSF56281 134 390 3.93E-30 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M634_18580 faf292a44f633d4a49cde538fffefb2c 414 Gene3D G3DSA:3.60.15.10 117 409 1.7E-71 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M634_18580 faf292a44f633d4a49cde538fffefb2c 414 Pfam PF12706 Beta-lactamase superfamily domain 152 352 5.3E-39 T 12-10-2018 IPR001279 Metallo-beta-lactamase M634_03445 ace3c14e8e7557e2c20aae29f7aa5bc4 653 Gene3D G3DSA:3.60.21.10 22 360 4.1E-136 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like M634_03445 ace3c14e8e7557e2c20aae29f7aa5bc4 653 SUPERFAMILY SSF56300 23 360 3.37E-87 T 12-10-2018 M634_03445 ace3c14e8e7557e2c20aae29f7aa5bc4 653 Pfam PF02872 5'-nucleotidase, C-terminal domain 362 554 1.1E-20 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_03445 ace3c14e8e7557e2c20aae29f7aa5bc4 653 SUPERFAMILY SSF55816 361 603 6.93E-36 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_03445 ace3c14e8e7557e2c20aae29f7aa5bc4 653 Gene3D G3DSA:3.90.780.10 417 592 2.5E-48 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_03445 ace3c14e8e7557e2c20aae29f7aa5bc4 653 ProSitePatterns PS00786 5'-nucleotidase signature 2. 115 126 - T 12-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_03445 ace3c14e8e7557e2c20aae29f7aa5bc4 653 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 29 653 0.0 T 12-10-2018 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 M634_03445 ace3c14e8e7557e2c20aae29f7aa5bc4 653 Pfam PF00149 Calcineurin-like phosphoesterase 30 265 3.9E-11 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 M634_03445 ace3c14e8e7557e2c20aae29f7aa5bc4 653 PRINTS PR01607 Apyrase family signature 289 309 4.5E-29 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_03445 ace3c14e8e7557e2c20aae29f7aa5bc4 653 PRINTS PR01607 Apyrase family signature 249 272 4.5E-29 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_03445 ace3c14e8e7557e2c20aae29f7aa5bc4 653 PRINTS PR01607 Apyrase family signature 28 46 4.5E-29 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_03445 ace3c14e8e7557e2c20aae29f7aa5bc4 653 PRINTS PR01607 Apyrase family signature 221 238 4.5E-29 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_03445 ace3c14e8e7557e2c20aae29f7aa5bc4 653 PRINTS PR01607 Apyrase family signature 434 457 4.5E-29 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_03445 ace3c14e8e7557e2c20aae29f7aa5bc4 653 PRINTS PR01607 Apyrase family signature 536 555 4.5E-29 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_02165 0172bf1a210d39f3f46955c7d7ee3c41 296 Gene3D G3DSA:3.40.190.10 165 265 1.3E-26 T 12-10-2018 M634_02165 0172bf1a210d39f3f46955c7d7ee3c41 296 Gene3D G3DSA:3.40.190.10 91 287 1.3E-26 T 12-10-2018 M634_02165 0172bf1a210d39f3f46955c7d7ee3c41 296 SUPERFAMILY SSF46785 1 87 9.31E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_02165 0172bf1a210d39f3f46955c7d7ee3c41 296 Pfam PF03466 LysR substrate binding domain 87 289 3.5E-34 T 12-10-2018 IPR005119 LysR, substrate-binding M634_02165 0172bf1a210d39f3f46955c7d7ee3c41 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.4E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_02165 0172bf1a210d39f3f46955c7d7ee3c41 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.4E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_02165 0172bf1a210d39f3f46955c7d7ee3c41 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.4E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_02165 0172bf1a210d39f3f46955c7d7ee3c41 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 4.4E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_02165 0172bf1a210d39f3f46955c7d7ee3c41 296 Gene3D G3DSA:1.10.10.10 1 90 5.8E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_02165 0172bf1a210d39f3f46955c7d7ee3c41 296 SUPERFAMILY SSF53850 87 290 1.21E-28 T 12-10-2018 M634_07000 d926059c87db92af22a1db4ab582fe68 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 241 4.1E-21 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_07000 d926059c87db92af22a1db4ab582fe68 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 73 1.6E-15 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 M634_07000 d926059c87db92af22a1db4ab582fe68 246 Gene3D G3DSA:1.10.3720.10 3 243 9.4E-50 T 12-10-2018 IPR035906 MetI-like superfamily M634_07000 d926059c87db92af22a1db4ab582fe68 246 SUPERFAMILY SSF161098 11 233 4.06E-40 T 12-10-2018 IPR035906 MetI-like superfamily M634_24080 6dc5481812c618fb80dddd395e5b9b74 315 Gene3D G3DSA:2.40.50.100 196 230 3.2E-9 T 12-10-2018 M634_24080 6dc5481812c618fb80dddd395e5b9b74 315 Pfam PF13437 HlyD family secretion protein 195 299 3.9E-9 T 12-10-2018 M634_24080 6dc5481812c618fb80dddd395e5b9b74 315 Gene3D G3DSA:2.40.50.100 34 95 5.3E-6 T 12-10-2018 M634_24080 6dc5481812c618fb80dddd395e5b9b74 315 Gene3D G3DSA:1.10.287.470 97 162 3.8E-11 T 12-10-2018 M634_24080 6dc5481812c618fb80dddd395e5b9b74 315 SUPERFAMILY SSF111369 102 158 2.22E-6 T 12-10-2018 M634_24080 6dc5481812c618fb80dddd395e5b9b74 315 Gene3D G3DSA:2.40.30.170 231 308 3.2E-9 T 12-10-2018 M634_24080 6dc5481812c618fb80dddd395e5b9b74 315 Gene3D G3DSA:1.10.287.470 168 195 3.2E-9 T 12-10-2018 M634_15390 aabc01f818de8f89ab7132b5b5dc009e 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 4.7E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_15390 aabc01f818de8f89ab7132b5b5dc009e 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 4.7E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_15390 aabc01f818de8f89ab7132b5b5dc009e 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 4.7E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_15390 aabc01f818de8f89ab7132b5b5dc009e 298 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 298 53.654 T 12-10-2018 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria M634_15390 aabc01f818de8f89ab7132b5b5dc009e 298 SUPERFAMILY SSF53850 94 295 4.71E-22 T 12-10-2018 M634_15390 aabc01f818de8f89ab7132b5b5dc009e 298 Gene3D G3DSA:1.10.10.10 2 85 5.4E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_15390 aabc01f818de8f89ab7132b5b5dc009e 298 SUPERFAMILY SSF46785 4 112 8.5E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_15390 aabc01f818de8f89ab7132b5b5dc009e 298 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 4 296 2.1E-105 T 12-10-2018 IPR017685 HTH-type transcriptional regulator ArgP M634_15390 aabc01f818de8f89ab7132b5b5dc009e 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 63 3.2E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_15390 aabc01f818de8f89ab7132b5b5dc009e 298 Pfam PF03466 LysR substrate binding domain 95 276 8.5E-15 T 12-10-2018 IPR005119 LysR, substrate-binding M634_15390 aabc01f818de8f89ab7132b5b5dc009e 298 Gene3D G3DSA:3.40.190.290 89 296 1.1E-63 T 12-10-2018 M634_07555 2b005c24246fda0de8c7dfe904480d61 179 Pfam PF12915 Protein of unknown function (DUF3833) 17 177 3.8E-66 T 12-10-2018 IPR024409 Protein of unknown function DUF3833 M634_00365 6ce09169e4cd3489b16b3d6c64b12207 238 Pfam PF13309 HTH domain 174 231 1.7E-18 T 12-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain M634_00365 6ce09169e4cd3489b16b3d6c64b12207 238 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 30 143 1.0E-61 T 12-10-2018 IPR013559 YheO-like M634_00365 6ce09169e4cd3489b16b3d6c64b12207 238 Pfam PF08348 YheO-like PAS domain 31 139 9.3E-36 T 12-10-2018 IPR013559 YheO-like M634_14620 cbea831a920c481054e773fb5b718105 448 Pfam PF01554 MatE 240 398 4.3E-15 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M634_14620 cbea831a920c481054e773fb5b718105 448 Pfam PF01554 MatE 15 176 4.0E-21 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M634_14620 cbea831a920c481054e773fb5b718105 448 TIGRFAM TIGR00797 matE: MATE efflux family protein 15 410 2.1E-48 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M634_14620 cbea831a920c481054e773fb5b718105 448 PIRSF PIRSF006603 1 438 9.5E-67 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M634_13320 3dcf91a21754c6d27283f5ccc0b77867 291 SUPERFAMILY SSF46785 1 83 8.74E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_13320 3dcf91a21754c6d27283f5ccc0b77867 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 5.1E-13 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_13320 3dcf91a21754c6d27283f5ccc0b77867 291 Gene3D G3DSA:1.10.10.10 1 89 1.1E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_13320 3dcf91a21754c6d27283f5ccc0b77867 291 Gene3D G3DSA:3.40.190.290 90 290 4.1E-72 T 12-10-2018 M634_13320 3dcf91a21754c6d27283f5ccc0b77867 291 SUPERFAMILY SSF53850 89 287 1.18E-37 T 12-10-2018 M634_13320 3dcf91a21754c6d27283f5ccc0b77867 291 Pfam PF03466 LysR substrate binding domain 88 286 1.1E-39 T 12-10-2018 IPR005119 LysR, substrate-binding M634_20360 dd7f4b09031e7dc424f8b4df574b2a2c 448 Pfam PF03448 MgtE intracellular N domain 35 135 6.3E-15 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain M634_20360 dd7f4b09031e7dc424f8b4df574b2a2c 448 Gene3D G3DSA:3.10.580.10 133 258 2.6E-33 T 12-10-2018 M634_20360 dd7f4b09031e7dc424f8b4df574b2a2c 448 SMART SM00924 34 137 3.4E-13 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain M634_20360 dd7f4b09031e7dc424f8b4df574b2a2c 448 SUPERFAMILY SSF158791 32 134 1.96E-14 T 12-10-2018 M634_20360 dd7f4b09031e7dc424f8b4df574b2a2c 448 Pfam PF01769 Divalent cation transporter 319 440 4.8E-24 T 12-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 M634_20360 dd7f4b09031e7dc424f8b4df574b2a2c 448 Gene3D G3DSA:1.10.357.20 274 447 9.0E-48 T 12-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain M634_20360 dd7f4b09031e7dc424f8b4df574b2a2c 448 SUPERFAMILY SSF161093 276 446 1.31E-47 T 12-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 M634_20360 dd7f4b09031e7dc424f8b4df574b2a2c 448 SUPERFAMILY SSF54631 140 272 1.44E-12 T 12-10-2018 M634_22315 33e0c553ca33e9b9653e2daa229b0ad7 206 Pfam PF00226 DnaJ domain 160 205 3.6E-10 T 12-10-2018 IPR001623 DnaJ domain M634_22315 33e0c553ca33e9b9653e2daa229b0ad7 206 SMART SM00271 153 206 2.0E-6 T 12-10-2018 IPR001623 DnaJ domain M634_22315 33e0c553ca33e9b9653e2daa229b0ad7 206 SUPERFAMILY SSF46565 112 205 1.15E-13 T 12-10-2018 IPR036869 Chaperone J-domain superfamily M634_22315 33e0c553ca33e9b9653e2daa229b0ad7 206 Pfam PF12339 DNA-J related protein 17 138 4.9E-43 T 12-10-2018 IPR021059 DnaJ-related protein, N-terminal M634_22315 33e0c553ca33e9b9653e2daa229b0ad7 206 Gene3D G3DSA:1.10.287.110 147 206 1.5E-11 T 12-10-2018 IPR036869 Chaperone J-domain superfamily M634_24255 79e98a32a0acc12b46c843faf6c281ff 296 Pfam PF03466 LysR substrate binding domain 94 292 2.0E-37 T 12-10-2018 IPR005119 LysR, substrate-binding M634_24255 79e98a32a0acc12b46c843faf6c281ff 296 SUPERFAMILY SSF46785 3 82 2.09E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_24255 79e98a32a0acc12b46c843faf6c281ff 296 Gene3D G3DSA:3.40.190.10 162 266 3.0E-55 T 12-10-2018 M634_24255 79e98a32a0acc12b46c843faf6c281ff 296 SUPERFAMILY SSF53850 94 294 8.89E-33 T 12-10-2018 M634_24255 79e98a32a0acc12b46c843faf6c281ff 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 4.5E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_24255 79e98a32a0acc12b46c843faf6c281ff 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.5E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_24255 79e98a32a0acc12b46c843faf6c281ff 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 4.5E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_24255 79e98a32a0acc12b46c843faf6c281ff 296 Gene3D G3DSA:1.10.10.10 1 85 1.7E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_24255 79e98a32a0acc12b46c843faf6c281ff 296 Gene3D G3DSA:3.40.190.10 93 287 3.0E-55 T 12-10-2018 M634_24255 79e98a32a0acc12b46c843faf6c281ff 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 3.5E-13 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_13410 4c44859ef0d3d9df6b2291df3647c0f6 310 Pfam PF05175 Methyltransferase small domain 134 223 3.2E-18 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 M634_13410 4c44859ef0d3d9df6b2291df3647c0f6 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 2.2E-138 T 12-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 M634_13410 4c44859ef0d3d9df6b2291df3647c0f6 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 301 2.3E-96 T 12-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 M634_13410 4c44859ef0d3d9df6b2291df3647c0f6 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 53.793 T 12-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 M634_13410 4c44859ef0d3d9df6b2291df3647c0f6 310 Gene3D G3DSA:3.40.50.150 103 282 1.2E-45 T 12-10-2018 M634_13410 4c44859ef0d3d9df6b2291df3647c0f6 310 Gene3D G3DSA:1.10.8.10 16 102 1.2E-5 T 12-10-2018 M634_13410 4c44859ef0d3d9df6b2291df3647c0f6 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 M634_13410 4c44859ef0d3d9df6b2291df3647c0f6 310 SUPERFAMILY SSF53335 16 295 2.09E-49 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_13410 4c44859ef0d3d9df6b2291df3647c0f6 310 PIRSF PIRSF037167 2 307 2.4E-149 T 12-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 M634_20365 9a223dfe05a533cdd7f0639e2e635b38 440 Pfam PF03109 ABC1 family 115 230 7.0E-29 T 12-10-2018 IPR004147 UbiB domain M634_20365 9a223dfe05a533cdd7f0639e2e635b38 440 SUPERFAMILY SSF56112 99 326 9.69E-15 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily M634_22080 ed9fa08fbfb64c35f53d144516646732 244 PIRSF PIRSF039085 4 243 1.1E-102 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 M634_22080 ed9fa08fbfb64c35f53d144516646732 244 Pfam PF00005 ABC transporter 23 167 5.1E-36 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_22080 ed9fa08fbfb64c35f53d144516646732 244 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_22080 ed9fa08fbfb64c35f53d144516646732 244 SMART SM00382 32 215 1.1E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_22080 ed9fa08fbfb64c35f53d144516646732 244 SUPERFAMILY SSF52540 7 237 2.72E-78 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_22080 ed9fa08fbfb64c35f53d144516646732 244 Gene3D G3DSA:3.40.50.300 5 244 2.4E-78 T 12-10-2018 M634_06360 d246a268a8ad40153ebe13141d048a33 388 Gene3D G3DSA:3.30.420.10 17 210 2.2E-68 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M634_06360 d246a268a8ad40153ebe13141d048a33 388 Pfam PF00570 HRDC domain 229 295 1.1E-9 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 M634_06360 d246a268a8ad40153ebe13141d048a33 388 Gene3D G3DSA:1.10.150.80 310 388 9.2E-29 T 12-10-2018 M634_06360 d246a268a8ad40153ebe13141d048a33 388 SUPERFAMILY SSF53098 14 225 4.44E-71 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M634_06360 d246a268a8ad40153ebe13141d048a33 388 Gene3D G3DSA:1.10.150.80 212 309 2.1E-18 T 12-10-2018 M634_06360 d246a268a8ad40153ebe13141d048a33 388 SUPERFAMILY SSF47819 312 387 6.21E-22 T 12-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 M634_06360 d246a268a8ad40153ebe13141d048a33 388 Pfam PF01612 3'-5' exonuclease 19 186 7.0E-41 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 M634_06360 d246a268a8ad40153ebe13141d048a33 388 SMART SM00474 19 187 1.4E-43 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 M634_06360 d246a268a8ad40153ebe13141d048a33 388 Hamap MF_01899 Ribonuclease D [rnd]. 19 388 44.208 T 12-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 M634_06360 d246a268a8ad40153ebe13141d048a33 388 TIGRFAM TIGR01388 rnd: ribonuclease D 21 385 5.5E-148 T 12-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 M634_06360 d246a268a8ad40153ebe13141d048a33 388 SUPERFAMILY SSF47819 210 317 4.14E-24 T 12-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 M634_11815 5052916b11808dee662ab9d7085d44be 198 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 3 198 38.928 T 12-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 M634_11815 5052916b11808dee662ab9d7085d44be 198 Pfam PF00925 GTP cyclohydrolase II 19 171 1.4E-60 T 12-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 M634_11815 5052916b11808dee662ab9d7085d44be 198 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 23 194 1.5E-62 T 12-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 M634_11815 5052916b11808dee662ab9d7085d44be 198 SUPERFAMILY SSF142695 19 172 6.8E-56 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 M634_11815 5052916b11808dee662ab9d7085d44be 198 Gene3D G3DSA:3.40.50.10990 5 174 2.2E-65 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 M634_07165 1439b8691276f2d613075b697381182b 278 SUPERFAMILY SSF53335 22 266 1.16E-33 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_07165 1439b8691276f2d613075b697381182b 278 Pfam PF08241 Methyltransferase domain 67 163 1.5E-13 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 M634_07165 1439b8691276f2d613075b697381182b 278 Gene3D G3DSA:3.40.50.150 24 278 1.5E-56 T 12-10-2018 M634_07165 1439b8691276f2d613075b697381182b 278 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 18 274 40.272 T 12-10-2018 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 M634_15080 a53a82a3b7f87c53ae8cb5d8754a25dd 947 Gene3D G3DSA:3.30.830.10 735 930 2.9E-38 T 12-10-2018 M634_15080 a53a82a3b7f87c53ae8cb5d8754a25dd 947 SUPERFAMILY SSF63411 515 717 1.29E-43 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 M634_15080 a53a82a3b7f87c53ae8cb5d8754a25dd 947 SUPERFAMILY SSF63411 735 936 2.83E-42 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 M634_15080 a53a82a3b7f87c53ae8cb5d8754a25dd 947 SUPERFAMILY SSF63411 45 254 2.33E-55 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 M634_15080 a53a82a3b7f87c53ae8cb5d8754a25dd 947 Pfam PF00675 Insulinase (Peptidase family M16) 536 641 2.6E-10 T 12-10-2018 IPR011765 Peptidase M16, N-terminal M634_15080 a53a82a3b7f87c53ae8cb5d8754a25dd 947 Pfam PF00675 Insulinase (Peptidase family M16) 65 175 9.3E-17 T 12-10-2018 IPR011765 Peptidase M16, N-terminal M634_15080 a53a82a3b7f87c53ae8cb5d8754a25dd 947 SUPERFAMILY SSF63411 274 464 3.33E-32 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 M634_15080 a53a82a3b7f87c53ae8cb5d8754a25dd 947 Gene3D G3DSA:3.30.830.10 521 726 2.2E-41 T 12-10-2018 M634_15080 a53a82a3b7f87c53ae8cb5d8754a25dd 947 Pfam PF05193 Peptidase M16 inactive domain 682 853 2.4E-22 T 12-10-2018 IPR007863 Peptidase M16, C-terminal M634_15080 a53a82a3b7f87c53ae8cb5d8754a25dd 947 Pfam PF05193 Peptidase M16 inactive domain 215 390 3.7E-30 T 12-10-2018 IPR007863 Peptidase M16, C-terminal M634_15080 a53a82a3b7f87c53ae8cb5d8754a25dd 947 Gene3D G3DSA:3.30.830.10 43 267 1.4E-65 T 12-10-2018 M634_15080 a53a82a3b7f87c53ae8cb5d8754a25dd 947 Gene3D G3DSA:3.30.830.10 270 468 2.3E-32 T 12-10-2018 M634_08200 32822abef9a936995e70bc0a43be0913 252 SUPERFAMILY SSF56931 13 251 5.36E-69 T 12-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 M634_08200 32822abef9a936995e70bc0a43be0913 252 Pfam PF02253 Phospholipase A1 19 249 7.0E-59 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 M634_08200 32822abef9a936995e70bc0a43be0913 252 PRINTS PR01486 Bacterial phospholipase A1 protein signature 53 70 2.1E-21 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 M634_08200 32822abef9a936995e70bc0a43be0913 252 PRINTS PR01486 Bacterial phospholipase A1 protein signature 222 242 2.1E-21 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 M634_08200 32822abef9a936995e70bc0a43be0913 252 PRINTS PR01486 Bacterial phospholipase A1 protein signature 167 185 2.1E-21 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 M634_08200 32822abef9a936995e70bc0a43be0913 252 PRINTS PR01486 Bacterial phospholipase A1 protein signature 96 115 2.1E-21 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 M634_08200 32822abef9a936995e70bc0a43be0913 252 PRINTS PR01486 Bacterial phospholipase A1 protein signature 200 217 2.1E-21 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 M634_08200 32822abef9a936995e70bc0a43be0913 252 Gene3D G3DSA:2.40.230.10 9 252 6.9E-65 T 12-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 M634_19955 cd2c1d759d9f3142be244d71476869fa 1020 SUPERFAMILY SSF82866 784 1003 3.27E-44 T 12-10-2018 M634_19955 cd2c1d759d9f3142be244d71476869fa 1020 Gene3D G3DSA:3.30.70.1440 650 846 1.3E-228 T 12-10-2018 M634_19955 cd2c1d759d9f3142be244d71476869fa 1020 SUPERFAMILY SSF82714 707 781 1.07E-7 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_19955 cd2c1d759d9f3142be244d71476869fa 1020 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 1.2E-19 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_19955 cd2c1d759d9f3142be244d71476869fa 1020 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 1.2E-19 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_19955 cd2c1d759d9f3142be244d71476869fa 1020 PRINTS PR00702 Acriflavin resistance protein family signature 468 491 1.2E-19 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_19955 cd2c1d759d9f3142be244d71476869fa 1020 PRINTS PR00702 Acriflavin resistance protein family signature 390 414 1.2E-19 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_19955 cd2c1d759d9f3142be244d71476869fa 1020 Gene3D G3DSA:3.30.2090.10 180 274 1.3E-228 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_19955 cd2c1d759d9f3142be244d71476869fa 1020 SUPERFAMILY SSF82693 550 600 9.42E-7 T 12-10-2018 M634_19955 cd2c1d759d9f3142be244d71476869fa 1020 SUPERFAMILY SSF82693 139 326 4.19E-14 T 12-10-2018 M634_19955 cd2c1d759d9f3142be244d71476869fa 1020 SUPERFAMILY SSF82866 298 495 1.57E-31 T 12-10-2018 M634_19955 cd2c1d759d9f3142be244d71476869fa 1020 Gene3D G3DSA:3.30.70.1320 137 332 1.3E-228 T 12-10-2018 M634_19955 cd2c1d759d9f3142be244d71476869fa 1020 Gene3D G3DSA:1.20.1640.10 507 998 1.3E-228 T 12-10-2018 M634_19955 cd2c1d759d9f3142be244d71476869fa 1020 Pfam PF00873 AcrB/AcrD/AcrF family 5 1000 2.6E-152 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_19955 cd2c1d759d9f3142be244d71476869fa 1020 Gene3D G3DSA:3.30.70.1430 551 649 1.3E-228 T 12-10-2018 M634_19955 cd2c1d759d9f3142be244d71476869fa 1020 SUPERFAMILY SSF82714 185 271 4.19E-13 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_19955 cd2c1d759d9f3142be244d71476869fa 1020 Gene3D G3DSA:3.30.2090.10 701 788 1.3E-228 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_19955 cd2c1d759d9f3142be244d71476869fa 1020 Gene3D G3DSA:1.20.1640.10 13 506 1.3E-228 T 12-10-2018 M634_19955 cd2c1d759d9f3142be244d71476869fa 1020 Gene3D G3DSA:3.30.70.1430 41 796 1.3E-228 T 12-10-2018 M634_19955 cd2c1d759d9f3142be244d71476869fa 1020 SUPERFAMILY SSF82693 41 134 1.04E-16 T 12-10-2018 M634_21130 f5d1905d351382922313b6d1924bb2d5 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 4.7E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M634_21130 f5d1905d351382922313b6d1924bb2d5 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 4.7E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M634_21130 f5d1905d351382922313b6d1924bb2d5 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 46 3.1E-19 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M634_21130 f5d1905d351382922313b6d1924bb2d5 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 12-10-2018 M634_21130 f5d1905d351382922313b6d1924bb2d5 335 Pfam PF13377 Periplasmic binding protein-like domain 171 331 1.9E-42 T 12-10-2018 M634_21130 f5d1905d351382922313b6d1924bb2d5 335 Gene3D G3DSA:3.40.50.2300 70 323 7.5E-88 T 12-10-2018 M634_21130 f5d1905d351382922313b6d1924bb2d5 335 SUPERFAMILY SSF53822 61 332 3.99E-94 T 12-10-2018 IPR028082 Periplasmic binding protein-like I M634_21130 f5d1905d351382922313b6d1924bb2d5 335 Gene3D G3DSA:1.10.260.40 3 60 4.9E-22 T 12-10-2018 M634_21130 f5d1905d351382922313b6d1924bb2d5 335 SMART SM00354 1 72 6.3E-34 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M634_21130 f5d1905d351382922313b6d1924bb2d5 335 Gene3D G3DSA:3.40.50.2300 162 291 7.5E-88 T 12-10-2018 M634_21130 f5d1905d351382922313b6d1924bb2d5 335 SUPERFAMILY SSF47413 1 60 1.31E-15 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M634_09040 12a2df7c5f4a738ce31fcf40b5267213 114 TIGRFAM TIGR02497 yscI_hrpB_dom: type III secretion apparatus protein, YscI/HrpB, C-terminal domain 76 114 6.6E-14 T 12-10-2018 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 M634_09040 12a2df7c5f4a738ce31fcf40b5267213 114 Pfam PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI 27 114 8.8E-29 T 12-10-2018 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 M634_08860 46592b17fc8a1fb83f4071646e80f7d4 248 SUPERFAMILY SSF53098 50 238 2.1E-41 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M634_08860 46592b17fc8a1fb83f4071646e80f7d4 248 Pfam PF00929 Exonuclease 59 229 2.0E-17 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III M634_08860 46592b17fc8a1fb83f4071646e80f7d4 248 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 53 237 1.3E-20 T 12-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_08860 46592b17fc8a1fb83f4071646e80f7d4 248 Gene3D G3DSA:3.30.420.10 53 239 1.1E-35 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M634_08860 46592b17fc8a1fb83f4071646e80f7d4 248 SMART SM00479 57 238 1.2E-28 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III M634_06830 867396251366f03a7121fe87122e28d1 386 Gene3D G3DSA:1.10.10.680 169 250 8.7E-78 T 12-10-2018 M634_06830 867396251366f03a7121fe87122e28d1 386 Pfam PF09002 Domain of unknown function (DUF1887) 1 379 1.4E-163 T 12-10-2018 IPR015093 Protein of unknown function DUF1887 M634_06830 867396251366f03a7121fe87122e28d1 386 SUPERFAMILY SSF52980 1 382 2.86E-120 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 M634_06830 867396251366f03a7121fe87122e28d1 386 Gene3D G3DSA:3.40.1350.10 251 376 8.7E-78 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 M634_06830 867396251366f03a7121fe87122e28d1 386 Gene3D G3DSA:3.40.50.10770 1 140 2.3E-60 T 12-10-2018 M634_00260 74be6b7c61ed4059941f65d6242b1682 624 Pfam PF00583 Acetyltransferase (GNAT) family 500 568 1.0E-8 T 12-10-2018 IPR000182 GNAT domain M634_00260 74be6b7c61ed4059941f65d6242b1682 624 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 40.612 T 12-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 M634_00260 74be6b7c61ed4059941f65d6242b1682 624 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 9.3E-68 T 12-10-2018 M634_00260 74be6b7c61ed4059941f65d6242b1682 624 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 9.3E-68 T 12-10-2018 M634_00260 74be6b7c61ed4059941f65d6242b1682 624 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 9.3E-68 T 12-10-2018 M634_00260 74be6b7c61ed4059941f65d6242b1682 624 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 9.3E-68 T 12-10-2018 M634_00260 74be6b7c61ed4059941f65d6242b1682 624 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 9.3E-68 T 12-10-2018 M634_00260 74be6b7c61ed4059941f65d6242b1682 624 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 9.3E-68 T 12-10-2018 M634_00260 74be6b7c61ed4059941f65d6242b1682 624 Gene3D G3DSA:3.40.630.30 462 604 2.9E-25 T 12-10-2018 M634_00260 74be6b7c61ed4059941f65d6242b1682 624 SUPERFAMILY SSF55729 466 584 7.85E-16 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_00260 74be6b7c61ed4059941f65d6242b1682 624 PIRSF PIRSF036456 1 624 0.0 T 12-10-2018 IPR011244 Bifunctional argininosuccinate lyase/acetyltransferase GO:0004056|GO:0005737|GO:0006526|GO:0016746 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 M634_00260 74be6b7c61ed4059941f65d6242b1682 624 Gene3D G3DSA:1.10.275.10 1 107 2.1E-36 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal M634_00260 74be6b7c61ed4059941f65d6242b1682 624 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 M634_00260 74be6b7c61ed4059941f65d6242b1682 624 Pfam PF00206 Lyase 6 301 3.5E-89 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal M634_00260 74be6b7c61ed4059941f65d6242b1682 624 Gene3D G3DSA:1.10.40.30 363 433 3.5E-148 T 12-10-2018 M634_00260 74be6b7c61ed4059941f65d6242b1682 624 SUPERFAMILY SSF48557 3 456 4.71E-142 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 M634_00260 74be6b7c61ed4059941f65d6242b1682 624 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 8.1E-204 T 12-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 M634_00260 74be6b7c61ed4059941f65d6242b1682 624 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 6.1E-25 T 12-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 M634_00260 74be6b7c61ed4059941f65d6242b1682 624 Gene3D G3DSA:1.20.200.10 108 446 3.5E-148 T 12-10-2018 M634_00260 74be6b7c61ed4059941f65d6242b1682 624 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 5.5E-28 T 12-10-2018 IPR000362 Fumarate lyase family M634_00260 74be6b7c61ed4059941f65d6242b1682 624 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 5.5E-28 T 12-10-2018 IPR000362 Fumarate lyase family M634_00260 74be6b7c61ed4059941f65d6242b1682 624 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 5.5E-28 T 12-10-2018 IPR000362 Fumarate lyase family M634_00260 74be6b7c61ed4059941f65d6242b1682 624 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 5.5E-28 T 12-10-2018 IPR000362 Fumarate lyase family M634_17655 8d63656bbfdb91739a4986a1d1578c7d 538 Pfam PF04231 Endonuclease I 294 530 2.1E-104 T 12-10-2018 IPR007346 Endonuclease I GO:0004518 M634_17655 8d63656bbfdb91739a4986a1d1578c7d 538 SUPERFAMILY SSF49785 22 164 5.61E-25 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily M634_17655 8d63656bbfdb91739a4986a1d1578c7d 538 SUPERFAMILY SSF54060 291 530 4.83E-52 T 12-10-2018 M634_17655 8d63656bbfdb91739a4986a1d1578c7d 538 Gene3D G3DSA:2.60.120.260 22 177 9.3E-15 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily M634_17655 8d63656bbfdb91739a4986a1d1578c7d 538 Pfam PF02018 Carbohydrate binding domain 22 136 4.2E-8 T 12-10-2018 IPR003305 Carbohydrate-binding, CenC-like GO:0016798 M634_24120 a73f415cdc0d9bfdddd78d36673f7558 571 Pfam PF11604 Copper binding periplasmic protein CusF 502 567 4.4E-20 T 12-10-2018 IPR021647 Copper binding periplasmic protein CusF M634_24120 a73f415cdc0d9bfdddd78d36673f7558 571 Pfam PF11604 Copper binding periplasmic protein CusF 422 487 1.3E-22 T 12-10-2018 IPR021647 Copper binding periplasmic protein CusF M634_24120 a73f415cdc0d9bfdddd78d36673f7558 571 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 113 321 8.2E-78 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M634_24120 a73f415cdc0d9bfdddd78d36673f7558 571 Gene3D G3DSA:2.40.50.100 132 174 9.1E-7 T 12-10-2018 M634_24120 a73f415cdc0d9bfdddd78d36673f7558 571 SUPERFAMILY SSF111369 135 326 1.31E-15 T 12-10-2018 M634_24120 a73f415cdc0d9bfdddd78d36673f7558 571 Gene3D G3DSA:2.40.420.20 328 418 5.5E-22 T 12-10-2018 M634_24120 a73f415cdc0d9bfdddd78d36673f7558 571 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 214 394 2.6E-34 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 M634_24120 a73f415cdc0d9bfdddd78d36673f7558 571 Gene3D G3DSA:2.40.30.170 231 327 2.4E-23 T 12-10-2018 M634_24120 a73f415cdc0d9bfdddd78d36673f7558 571 Gene3D G3DSA:2.40.50.320 498 569 2.5E-17 T 12-10-2018 M634_24120 a73f415cdc0d9bfdddd78d36673f7558 571 Gene3D G3DSA:2.40.50.320 419 488 4.7E-19 T 12-10-2018 M634_12660 47c94e65147685a5468e6755dd3c2618 85 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 85 2.7E-20 T 12-10-2018 M634_12660 47c94e65147685a5468e6755dd3c2618 85 SUPERFAMILY SSF54285 1 85 1.29E-18 T 12-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp M634_12660 47c94e65147685a5468e6755dd3c2618 85 Gene3D G3DSA:3.10.20.30 1 85 1.2E-22 T 12-10-2018 IPR012675 Beta-grasp domain superfamily M634_12660 47c94e65147685a5468e6755dd3c2618 85 Pfam PF02597 ThiS family 4 85 1.2E-21 T 12-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 M634_04860 71691356ad3829fdbd4ca21926c02b22 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 1.5E-59 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 M634_04860 71691356ad3829fdbd4ca21926c02b22 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 1.5E-59 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 M634_04860 71691356ad3829fdbd4ca21926c02b22 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 1.5E-59 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 M634_04860 71691356ad3829fdbd4ca21926c02b22 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 1.5E-59 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 M634_04860 71691356ad3829fdbd4ca21926c02b22 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 1.5E-59 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 M634_04860 71691356ad3829fdbd4ca21926c02b22 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 1.5E-59 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 M634_04860 71691356ad3829fdbd4ca21926c02b22 267 Gene3D G3DSA:3.40.190.80 144 266 3.1E-38 T 12-10-2018 M634_04860 71691356ad3829fdbd4ca21926c02b22 267 Pfam PF00459 Inositol monophosphatase family 2 254 4.0E-69 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 M634_04860 71691356ad3829fdbd4ca21926c02b22 267 Gene3D G3DSA:3.30.540.10 1 140 8.6E-50 T 12-10-2018 M634_04860 71691356ad3829fdbd4ca21926c02b22 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 12-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 M634_04860 71691356ad3829fdbd4ca21926c02b22 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 12-10-2018 IPR020583 Inositol monophosphatase, metal-binding site M634_04860 71691356ad3829fdbd4ca21926c02b22 267 SUPERFAMILY SSF56655 1 259 1.2E-83 T 12-10-2018 M634_04860 71691356ad3829fdbd4ca21926c02b22 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 1.7E-35 T 12-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 M634_04860 71691356ad3829fdbd4ca21926c02b22 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 1.7E-35 T 12-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 M634_04860 71691356ad3829fdbd4ca21926c02b22 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 1.7E-35 T 12-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 M634_04860 71691356ad3829fdbd4ca21926c02b22 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 1.7E-35 T 12-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 M634_19630 b5d321f7c9fb3bd6aad8d884bf6d2635 826 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 16 818 2.9E-166 T 12-10-2018 IPR005887 Alpha-1,2-mannosidase, putative M634_19630 b5d321f7c9fb3bd6aad8d884bf6d2635 826 SUPERFAMILY SSF48208 313 796 1.11E-18 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 M634_19630 b5d321f7c9fb3bd6aad8d884bf6d2635 826 Gene3D G3DSA:3.30.2080.10 338 818 4.4E-217 T 12-10-2018 M634_19630 b5d321f7c9fb3bd6aad8d884bf6d2635 826 Gene3D G3DSA:1.20.1050.60 404 512 4.4E-217 T 12-10-2018 M634_19630 b5d321f7c9fb3bd6aad8d884bf6d2635 826 Gene3D G3DSA:2.70.98.10 39 403 4.4E-217 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 M634_19630 b5d321f7c9fb3bd6aad8d884bf6d2635 826 Gene3D G3DSA:1.20.1610.10 513 691 4.4E-217 T 12-10-2018 M634_19630 b5d321f7c9fb3bd6aad8d884bf6d2635 826 Pfam PF07971 Glycosyl hydrolase family 92 281 815 2.4E-141 T 12-10-2018 IPR012939 Glycosyl hydrolase family 92 M634_14540 996424ef49340b8bc251e7c71a8472c2 239 Gene3D G3DSA:3.40.50.1580 1 237 6.5E-76 T 12-10-2018 M634_14540 996424ef49340b8bc251e7c71a8472c2 239 SUPERFAMILY SSF53167 3 234 9.03E-93 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 M634_14540 996424ef49340b8bc251e7c71a8472c2 239 Pfam PF01048 Phosphorylase superfamily 15 217 3.0E-41 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 M634_14540 996424ef49340b8bc251e7c71a8472c2 239 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.688 T 12-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 M634_14540 996424ef49340b8bc251e7c71a8472c2 239 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 4.5E-119 T 12-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 M634_14540 996424ef49340b8bc251e7c71a8472c2 239 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 12-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 M634_15425 91cb3b9295c830feb9f4d337865a0173 652 SUPERFAMILY SSF56935 33 652 3.83E-127 T 12-10-2018 M634_15425 91cb3b9295c830feb9f4d337865a0173 652 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 156 1.0E-27 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain M634_15425 91cb3b9295c830feb9f4d337865a0173 652 Pfam PF00593 TonB dependent receptor 199 650 4.9E-61 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel M634_15425 91cb3b9295c830feb9f4d337865a0173 652 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 40 - T 12-10-2018 IPR010916 TonB box, conserved site M634_15425 91cb3b9295c830feb9f4d337865a0173 652 Gene3D G3DSA:2.40.170.20 167 652 8.0E-134 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily M634_15425 91cb3b9295c830feb9f4d337865a0173 652 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 635 652 - T 12-10-2018 IPR010917 TonB-dependent receptor, conserved site M634_15425 91cb3b9295c830feb9f4d337865a0173 652 Gene3D G3DSA:2.170.130.10 28 161 1.0E-40 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily M634_07220 cd1068a0124073cfad110d0ca760e139 592 Pfam PF02938 GAD domain 307 406 2.0E-30 T 12-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 M634_07220 cd1068a0124073cfad110d0ca760e139 592 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 3.4E-266 T 12-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 M634_07220 cd1068a0124073cfad110d0ca760e139 592 SUPERFAMILY SSF50249 1 105 2.48E-34 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_07220 cd1068a0124073cfad110d0ca760e139 592 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 584 33.297 T 12-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 M634_07220 cd1068a0124073cfad110d0ca760e139 592 Gene3D G3DSA:3.30.930.10 118 578 1.1E-195 T 12-10-2018 M634_07220 cd1068a0124073cfad110d0ca760e139 592 SUPERFAMILY SSF55681 108 583 3.64E-100 T 12-10-2018 M634_07220 cd1068a0124073cfad110d0ca760e139 592 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 8.5E-105 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 M634_07220 cd1068a0124073cfad110d0ca760e139 592 SUPERFAMILY SSF55261 288 419 7.36E-47 T 12-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 M634_07220 cd1068a0124073cfad110d0ca760e139 592 Gene3D G3DSA:3.30.1360.30 271 420 1.1E-195 T 12-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 M634_07220 cd1068a0124073cfad110d0ca760e139 592 Gene3D G3DSA:2.40.50.140 1 106 1.5E-34 T 12-10-2018 M634_07220 cd1068a0124073cfad110d0ca760e139 592 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 3.4E-16 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 M634_07220 cd1068a0124073cfad110d0ca760e139 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 2.7E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 M634_07220 cd1068a0124073cfad110d0ca760e139 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 2.7E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 M634_07220 cd1068a0124073cfad110d0ca760e139 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 2.7E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 M634_07220 cd1068a0124073cfad110d0ca760e139 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 2.7E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 M634_22715 c0f8c3f2bf870fa010eca26edf21ffd5 464 SUPERFAMILY SSF103473 17 445 2.62E-58 T 12-10-2018 IPR036259 MFS transporter superfamily M634_22715 c0f8c3f2bf870fa010eca26edf21ffd5 464 PIRSF PIRSF002808 9 461 3.9E-108 T 12-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 M634_22715 c0f8c3f2bf870fa010eca26edf21ffd5 464 ProSitePatterns PS00942 glpT family of transporters signature. 156 172 - T 12-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 M634_22715 c0f8c3f2bf870fa010eca26edf21ffd5 464 Pfam PF07690 Major Facilitator Superfamily 35 396 7.1E-34 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M634_22715 c0f8c3f2bf870fa010eca26edf21ffd5 464 Gene3D G3DSA:1.20.1250.20 246 459 4.2E-37 T 12-10-2018 M634_22715 c0f8c3f2bf870fa010eca26edf21ffd5 464 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 426 7.2E-139 T 12-10-2018 M634_22715 c0f8c3f2bf870fa010eca26edf21ffd5 464 Gene3D G3DSA:1.20.1250.20 28 230 9.4E-34 T 12-10-2018 M634_00145 807033517155710649c3eb44cb6e56bf 391 Gene3D G3DSA:2.40.160.50 115 388 6.4E-13 T 12-10-2018 M634_00145 807033517155710649c3eb44cb6e56bf 391 Pfam PF01103 Surface antigen 146 364 1.5E-5 T 12-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 M634_12980 499bc46742f8117a59dd31bc1bb29d2c 678 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 489 644 1.2E-41 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_12980 499bc46742f8117a59dd31bc1bb29d2c 678 SUPERFAMILY SSF58104 378 677 3.01E-63 T 12-10-2018 M634_12980 499bc46742f8117a59dd31bc1bb29d2c 678 SUPERFAMILY SSF103190 115 212 9.42E-13 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily M634_12980 499bc46742f8117a59dd31bc1bb29d2c 678 Gene3D G3DSA:1.10.287.950 348 678 9.1E-67 T 12-10-2018 M634_12980 499bc46742f8117a59dd31bc1bb29d2c 678 Pfam PF17201 Cache 3/Cache 2 fusion domain 40 324 5.4E-67 T 12-10-2018 IPR033462 Cache 3/Cache 2 fusion domain M634_12980 499bc46742f8117a59dd31bc1bb29d2c 678 SMART SM00283 417 678 1.5E-66 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_12980 499bc46742f8117a59dd31bc1bb29d2c 678 Gene3D G3DSA:3.30.450.20 182 328 2.5E-12 T 12-10-2018 M634_03765 5b7c430e4dee7f230732ac88d62ee3ad 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 40.336 T 12-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 M634_03765 5b7c430e4dee7f230732ac88d62ee3ad 610 Pfam PF01380 SIS domain 463 592 3.5E-24 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 M634_03765 5b7c430e4dee7f230732ac88d62ee3ad 610 Pfam PF01380 SIS domain 290 419 1.2E-32 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 M634_03765 5b7c430e4dee7f230732ac88d62ee3ad 610 Gene3D G3DSA:3.40.50.10490 249 609 2.2E-144 T 12-10-2018 M634_03765 5b7c430e4dee7f230732ac88d62ee3ad 610 SUPERFAMILY SSF56235 2 234 2.23E-75 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal M634_03765 5b7c430e4dee7f230732ac88d62ee3ad 610 Pfam PF13522 Glutamine amidotransferase domain 54 174 7.3E-22 T 12-10-2018 M634_03765 5b7c430e4dee7f230732ac88d62ee3ad 610 SUPERFAMILY SSF53697 245 610 1.58E-113 T 12-10-2018 M634_03765 5b7c430e4dee7f230732ac88d62ee3ad 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 1.1E-257 T 12-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 M634_03765 5b7c430e4dee7f230732ac88d62ee3ad 610 Gene3D G3DSA:3.40.50.10490 448 595 2.2E-144 T 12-10-2018 M634_03765 5b7c430e4dee7f230732ac88d62ee3ad 610 Gene3D G3DSA:3.60.20.10 2 241 2.6E-81 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal M634_02180 5fcb4c67bedb9561df3c72a334d352e1 1040 Gene3D G3DSA:3.30.2090.10 698 786 1.1E-287 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_02180 5fcb4c67bedb9561df3c72a334d352e1 1040 Pfam PF00873 AcrB/AcrD/AcrF family 4 1003 3.9E-277 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_02180 5fcb4c67bedb9561df3c72a334d352e1 1040 SUPERFAMILY SSF82866 290 489 4.97E-47 T 12-10-2018 M634_02180 5fcb4c67bedb9561df3c72a334d352e1 1040 Gene3D G3DSA:1.20.1640.10 10 500 1.1E-287 T 12-10-2018 M634_02180 5fcb4c67bedb9561df3c72a334d352e1 1040 Gene3D G3DSA:3.30.70.1430 40 794 1.1E-287 T 12-10-2018 M634_02180 5fcb4c67bedb9561df3c72a334d352e1 1040 Gene3D G3DSA:3.30.2090.10 178 268 1.1E-287 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_02180 5fcb4c67bedb9561df3c72a334d352e1 1040 Gene3D G3DSA:3.30.70.1430 555 647 1.1E-287 T 12-10-2018 M634_02180 5fcb4c67bedb9561df3c72a334d352e1 1040 SUPERFAMILY SSF82866 782 1008 7.85E-48 T 12-10-2018 M634_02180 5fcb4c67bedb9561df3c72a334d352e1 1040 Gene3D G3DSA:1.20.1640.10 501 1001 1.1E-287 T 12-10-2018 M634_02180 5fcb4c67bedb9561df3c72a334d352e1 1040 SUPERFAMILY SSF82693 136 323 7.72E-22 T 12-10-2018 M634_02180 5fcb4c67bedb9561df3c72a334d352e1 1040 SUPERFAMILY SSF82693 41 130 2.79E-23 T 12-10-2018 M634_02180 5fcb4c67bedb9561df3c72a334d352e1 1040 Gene3D G3DSA:3.30.70.1440 648 843 1.1E-287 T 12-10-2018 M634_02180 5fcb4c67bedb9561df3c72a334d352e1 1040 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 4.1E-76 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_02180 5fcb4c67bedb9561df3c72a334d352e1 1040 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 4.1E-76 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_02180 5fcb4c67bedb9561df3c72a334d352e1 1040 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 4.1E-76 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_02180 5fcb4c67bedb9561df3c72a334d352e1 1040 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 4.1E-76 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_02180 5fcb4c67bedb9561df3c72a334d352e1 1040 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 4.1E-76 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_02180 5fcb4c67bedb9561df3c72a334d352e1 1040 PRINTS PR00702 Acriflavin resistance protein family signature 603 617 4.1E-76 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_02180 5fcb4c67bedb9561df3c72a334d352e1 1040 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 4.1E-76 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_02180 5fcb4c67bedb9561df3c72a334d352e1 1040 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 4.1E-76 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_02180 5fcb4c67bedb9561df3c72a334d352e1 1040 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 4.1E-76 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_02180 5fcb4c67bedb9561df3c72a334d352e1 1040 SUPERFAMILY SSF82714 701 783 1.31E-17 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_02180 5fcb4c67bedb9561df3c72a334d352e1 1040 SUPERFAMILY SSF82693 553 650 1.99E-21 T 12-10-2018 M634_02180 5fcb4c67bedb9561df3c72a334d352e1 1040 Gene3D G3DSA:3.30.70.1320 134 325 1.1E-287 T 12-10-2018 M634_02180 5fcb4c67bedb9561df3c72a334d352e1 1040 SUPERFAMILY SSF82714 182 263 1.31E-15 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_00085 155943c2e62ade5f908424f332711afb 259 SUPERFAMILY SSF52402 26 213 4.06E-56 T 12-10-2018 M634_00085 155943c2e62ade5f908424f332711afb 259 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 26 247 4.1E-91 T 12-10-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 M634_00085 155943c2e62ade5f908424f332711afb 259 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 38 248 7.1E-87 T 12-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 M634_00085 155943c2e62ade5f908424f332711afb 259 PIRSF PIRSF000857 6 253 5.6E-56 T 12-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 M634_00085 155943c2e62ade5f908424f332711afb 259 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 14 248 39.677 T 12-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 M634_00085 155943c2e62ade5f908424f332711afb 259 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 53 224 6.5E-50 T 12-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 M634_00085 155943c2e62ade5f908424f332711afb 259 Gene3D G3DSA:3.40.50.620 8 221 4.1E-65 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M634_13790 f665c013110d751e0f7a9aa54b636556 116 Pfam PF03960 ArsC family 6 115 4.1E-20 T 12-10-2018 IPR006660 Arsenate reductase-like M634_13790 f665c013110d751e0f7a9aa54b636556 116 SUPERFAMILY SSF52833 2 116 2.01E-35 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M634_13790 f665c013110d751e0f7a9aa54b636556 116 Gene3D G3DSA:3.40.30.10 1 116 2.9E-48 T 12-10-2018 M634_13790 f665c013110d751e0f7a9aa54b636556 116 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 3 116 5.1E-48 T 12-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 M634_04235 3ab4e0a97829270769d5d2ec48000d47 132 TIGRFAM TIGR00586 mutt: mutator mutT protein 1 127 1.1E-43 T 12-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 M634_04235 3ab4e0a97829270769d5d2ec48000d47 132 PRINTS PR00502 NUDIX hydrolase family signature 48 63 6.0E-10 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 M634_04235 3ab4e0a97829270769d5d2ec48000d47 132 PRINTS PR00502 NUDIX hydrolase family signature 34 48 6.0E-10 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 M634_04235 3ab4e0a97829270769d5d2ec48000d47 132 Gene3D G3DSA:3.90.79.10 1 132 6.8E-41 T 12-10-2018 M634_04235 3ab4e0a97829270769d5d2ec48000d47 132 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 M634_04235 3ab4e0a97829270769d5d2ec48000d47 132 SUPERFAMILY SSF55811 1 127 1.22E-34 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 M634_04235 3ab4e0a97829270769d5d2ec48000d47 132 Pfam PF00293 NUDIX domain 7 125 7.0E-21 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 M634_20120 85489cd885a93b2eb7cf60e97650c41e 79 Pfam PF04325 Protein of unknown function (DUF465) 29 74 2.0E-10 T 12-10-2018 IPR007420 Protein of unknown function DUF465 M634_20120 85489cd885a93b2eb7cf60e97650c41e 79 Gene3D G3DSA:1.20.58.660 11 78 9.1E-14 T 12-10-2018 M634_02970 6d06c6012330019ec4fa76aff150cfff 311 Pfam PF05686 Glycosyl transferase family 90 140 286 2.9E-14 T 12-10-2018 IPR006598 Lipopolysaccharide-modifying protein M634_02970 6d06c6012330019ec4fa76aff150cfff 311 SMART SM00672 93 302 2.1E-4 T 12-10-2018 IPR006598 Lipopolysaccharide-modifying protein M634_16970 793d0395f69d8405d534354680bfe24b 238 Pfam PF00194 Eukaryotic-type carbonic anhydrase 22 237 1.3E-53 T 12-10-2018 IPR001148 Alpha carbonic anhydrase domain M634_16970 793d0395f69d8405d534354680bfe24b 238 SMART SM01057 23 236 3.7E-94 T 12-10-2018 IPR001148 Alpha carbonic anhydrase domain M634_16970 793d0395f69d8405d534354680bfe24b 238 Gene3D G3DSA:3.10.200.10 22 237 4.6E-85 T 12-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily M634_16970 793d0395f69d8405d534354680bfe24b 238 SUPERFAMILY SSF51069 22 236 1.67E-75 T 12-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily M634_13435 5f3f7640eecbc8811c883fbe86fdb028 703 SUPERFAMILY SSF51735 310 491 2.03E-47 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_13435 5f3f7640eecbc8811c883fbe86fdb028 703 Gene3D G3DSA:3.40.50.720 310 496 1.0E-57 T 12-10-2018 M634_13435 5f3f7640eecbc8811c883fbe86fdb028 703 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 312 491 1.7E-53 T 12-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 M634_13435 5f3f7640eecbc8811c883fbe86fdb028 703 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 494 587 2.7E-23 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 M634_13435 5f3f7640eecbc8811c883fbe86fdb028 703 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 616 691 4.4E-5 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 M634_13435 5f3f7640eecbc8811c883fbe86fdb028 703 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 105 125 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 M634_13435 5f3f7640eecbc8811c883fbe86fdb028 703 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 491 516 - T 12-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 M634_13435 5f3f7640eecbc8811c883fbe86fdb028 703 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 6 703 0.0 T 12-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 M634_13435 5f3f7640eecbc8811c883fbe86fdb028 703 Gene3D G3DSA:3.90.226.10 1 307 2.4E-98 T 12-10-2018 M634_13435 5f3f7640eecbc8811c883fbe86fdb028 703 SUPERFAMILY SSF48179 494 593 2.3E-26 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 M634_13435 5f3f7640eecbc8811c883fbe86fdb028 703 Gene3D G3DSA:1.10.1040.50 497 698 7.3E-70 T 12-10-2018 M634_13435 5f3f7640eecbc8811c883fbe86fdb028 703 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 219 4.7E-41 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 M634_13435 5f3f7640eecbc8811c883fbe86fdb028 703 SUPERFAMILY SSF52096 2 303 4.47E-68 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily M634_13435 5f3f7640eecbc8811c883fbe86fdb028 703 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 1 703 53.039 T 12-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 M634_13435 5f3f7640eecbc8811c883fbe86fdb028 703 SUPERFAMILY SSF48179 610 703 9.35E-27 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 M634_19415 7304d14f4542b2ed0b170e3bef4b0da5 290 SUPERFAMILY SSF53850 94 289 1.68E-26 T 12-10-2018 M634_19415 7304d14f4542b2ed0b170e3bef4b0da5 290 Gene3D G3DSA:3.40.190.10 163 261 1.1E-39 T 12-10-2018 M634_19415 7304d14f4542b2ed0b170e3bef4b0da5 290 Gene3D G3DSA:3.40.190.10 103 285 1.1E-39 T 12-10-2018 M634_19415 7304d14f4542b2ed0b170e3bef4b0da5 290 Pfam PF03466 LysR substrate binding domain 92 289 8.3E-25 T 12-10-2018 IPR005119 LysR, substrate-binding M634_19415 7304d14f4542b2ed0b170e3bef4b0da5 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.6E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_19415 7304d14f4542b2ed0b170e3bef4b0da5 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.6E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_19415 7304d14f4542b2ed0b170e3bef4b0da5 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.6E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_19415 7304d14f4542b2ed0b170e3bef4b0da5 290 Gene3D G3DSA:1.10.10.10 7 97 1.1E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_19415 7304d14f4542b2ed0b170e3bef4b0da5 290 SUPERFAMILY SSF46785 1 85 3.05E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_19415 7304d14f4542b2ed0b170e3bef4b0da5 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 2.2E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_07750 704ccebd0d54e539136bc56ece1a3575 260 SUPERFAMILY SSF52540 3 252 1.11E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_07750 704ccebd0d54e539136bc56ece1a3575 260 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_07750 704ccebd0d54e539136bc56ece1a3575 260 SMART SM00382 38 227 5.5E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_07750 704ccebd0d54e539136bc56ece1a3575 260 Gene3D G3DSA:3.40.50.300 1 259 4.1E-69 T 12-10-2018 M634_07750 704ccebd0d54e539136bc56ece1a3575 260 Pfam PF00005 ABC transporter 30 178 4.6E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_22920 b255f310079b751c328eacff47db025b 543 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 355 505 2.1E-40 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_22920 b255f310079b751c328eacff47db025b 543 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 176 1.3E-20 T 12-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain M634_22920 b255f310079b751c328eacff47db025b 543 SMART SM00283 280 541 9.6E-72 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_22920 b255f310079b751c328eacff47db025b 543 SMART SM00304 211 265 1.7E-4 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_22920 b255f310079b751c328eacff47db025b 543 SMART SM00304 300 367 110.0 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_22920 b255f310079b751c328eacff47db025b 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 407 436 3.8E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M634_22920 b255f310079b751c328eacff47db025b 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 6 31 3.8E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M634_22920 b255f310079b751c328eacff47db025b 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 378 405 3.8E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M634_22920 b255f310079b751c328eacff47db025b 543 SUPERFAMILY SSF58104 235 542 8.5E-73 T 12-10-2018 M634_22920 b255f310079b751c328eacff47db025b 543 Gene3D G3DSA:1.10.287.950 211 543 2.7E-76 T 12-10-2018 M634_23705 bedb2c45d9b3f471535bac7c1e41564b 216 SUPERFAMILY SSF52317 1 215 3.93E-60 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M634_23705 bedb2c45d9b3f471535bac7c1e41564b 216 PIRSF PIRSF006320 1 216 1.7E-107 T 12-10-2018 IPR026041 Glyoxalase ElbB M634_23705 bedb2c45d9b3f471535bac7c1e41564b 216 Gene3D G3DSA:3.40.50.880 1 216 8.3E-88 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M634_16380 5882edf0f14dbf3bbbc9ef06fb180729 69 Pfam PF07885 Ion channel 23 68 4.9E-10 T 12-10-2018 IPR013099 Potassium channel domain M634_16380 5882edf0f14dbf3bbbc9ef06fb180729 69 Gene3D G3DSA:1.10.287.70 9 64 5.7E-18 T 12-10-2018 M634_16380 5882edf0f14dbf3bbbc9ef06fb180729 69 PRINTS PR00169 Potassium channel signature 14 37 2.4E-5 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 M634_16380 5882edf0f14dbf3bbbc9ef06fb180729 69 PRINTS PR00169 Potassium channel signature 45 67 2.4E-5 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 M634_16380 5882edf0f14dbf3bbbc9ef06fb180729 69 SUPERFAMILY SSF81324 5 67 9.55E-16 T 12-10-2018 M634_01230 b5caa2d21ac759436554b7e43b0b9f47 121 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 1 111 6.0E-59 T 12-10-2018 IPR009867 Protein of unknown function DUF1422 M634_01230 b5caa2d21ac759436554b7e43b0b9f47 121 Pfam PF07226 Protein of unknown function (DUF1422) 5 115 9.6E-51 T 12-10-2018 IPR009867 Protein of unknown function DUF1422 M634_14605 f5b740b40062bec2a5e6b1e04eff0511 679 SUPERFAMILY SSF141868 427 674 1.44E-83 T 12-10-2018 IPR035919 EAL domain superfamily M634_14605 f5b740b40062bec2a5e6b1e04eff0511 679 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 253 407 1.8E-36 T 12-10-2018 IPR000160 GGDEF domain M634_14605 f5b740b40062bec2a5e6b1e04eff0511 679 Pfam PF00990 Diguanylate cyclase, GGDEF domain 253 406 1.9E-42 T 12-10-2018 IPR000160 GGDEF domain M634_14605 f5b740b40062bec2a5e6b1e04eff0511 679 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 120 1.1E-7 T 12-10-2018 IPR000014 PAS domain M634_14605 f5b740b40062bec2a5e6b1e04eff0511 679 SMART SM00091 131 198 0.083 T 12-10-2018 IPR000014 PAS domain M634_14605 f5b740b40062bec2a5e6b1e04eff0511 679 SMART SM00091 8 74 0.0052 T 12-10-2018 IPR000014 PAS domain M634_14605 f5b740b40062bec2a5e6b1e04eff0511 679 Pfam PF08448 PAS fold 15 119 1.2E-6 T 12-10-2018 IPR013656 PAS fold-4 M634_14605 f5b740b40062bec2a5e6b1e04eff0511 679 Pfam PF00563 EAL domain 427 661 3.1E-72 T 12-10-2018 IPR001633 EAL domain M634_14605 f5b740b40062bec2a5e6b1e04eff0511 679 SMART SM00052 420 666 4.8E-106 T 12-10-2018 IPR001633 EAL domain M634_14605 f5b740b40062bec2a5e6b1e04eff0511 679 Gene3D G3DSA:3.30.450.20 3 128 1.2E-11 T 12-10-2018 M634_14605 f5b740b40062bec2a5e6b1e04eff0511 679 Gene3D G3DSA:3.20.20.450 423 675 1.7E-94 T 12-10-2018 IPR035919 EAL domain superfamily M634_14605 f5b740b40062bec2a5e6b1e04eff0511 679 SUPERFAMILY SSF55073 258 412 2.43E-45 T 12-10-2018 IPR029787 Nucleotide cyclase M634_14605 f5b740b40062bec2a5e6b1e04eff0511 679 Pfam PF13188 PAS domain 133 176 1.2E-4 T 12-10-2018 IPR000014 PAS domain M634_14605 f5b740b40062bec2a5e6b1e04eff0511 679 Gene3D G3DSA:3.30.450.20 129 238 7.1E-7 T 12-10-2018 M634_14605 f5b740b40062bec2a5e6b1e04eff0511 679 SMART SM00267 243 410 2.0E-52 T 12-10-2018 IPR000160 GGDEF domain M634_14605 f5b740b40062bec2a5e6b1e04eff0511 679 Gene3D G3DSA:3.30.70.270 250 422 3.4E-49 T 12-10-2018 M634_14605 f5b740b40062bec2a5e6b1e04eff0511 679 SUPERFAMILY SSF55785 115 210 3.44E-8 T 12-10-2018 IPR035965 PAS domain superfamily M634_14605 f5b740b40062bec2a5e6b1e04eff0511 679 SUPERFAMILY SSF55785 5 115 1.17E-9 T 12-10-2018 IPR035965 PAS domain superfamily M634_19060 0687c3fc844b250bcf28af5f9999c9e6 131 Pfam PF00031 Cystatin domain 53 104 3.3E-6 T 12-10-2018 IPR000010 Cystatin domain GO:0004869 M634_19060 0687c3fc844b250bcf28af5f9999c9e6 131 Gene3D G3DSA:3.10.450.10 46 109 2.0E-5 T 12-10-2018 M634_19060 0687c3fc844b250bcf28af5f9999c9e6 131 SUPERFAMILY SSF54403 48 116 4.86E-12 T 12-10-2018 M634_06290 4db0df5d0e9eac2bdf71233d0efc5e29 75 SUPERFAMILY SSF50037 4 74 2.52E-19 T 12-10-2018 IPR008988 Transcriptional repressor, C-terminal M634_06290 4db0df5d0e9eac2bdf71233d0efc5e29 75 Pfam PF04023 FeoA domain 1 74 2.9E-19 T 12-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 M634_06290 4db0df5d0e9eac2bdf71233d0efc5e29 75 Gene3D G3DSA:2.30.30.90 1 75 3.7E-24 T 12-10-2018 IPR038157 Ferrous iron transporter, core domain M634_06290 4db0df5d0e9eac2bdf71233d0efc5e29 75 SMART SM00899 1 74 5.6E-24 T 12-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 M634_13865 20b3b78ea5dcf787a301aeff183a25b8 251 SUPERFAMILY SSF53335 73 212 8.03E-20 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_13865 20b3b78ea5dcf787a301aeff183a25b8 251 Pfam PF08241 Methyltransferase domain 61 125 6.9E-9 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 M634_13865 20b3b78ea5dcf787a301aeff183a25b8 251 Gene3D G3DSA:3.40.50.150 55 183 5.1E-14 T 12-10-2018 M634_04440 def701559e060476b29897e3c3784150 579 Pfam PF01368 DHH family 71 205 2.4E-9 T 12-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 M634_04440 def701559e060476b29897e3c3784150 579 SUPERFAMILY SSF64182 45 464 6.67E-119 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily M634_04440 def701559e060476b29897e3c3784150 579 Gene3D G3DSA:3.90.1640.30 45 323 1.7E-89 T 12-10-2018 M634_04440 def701559e060476b29897e3c3784150 579 Pfam PF02272 DHHA1 domain 319 451 1.1E-26 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 M634_04440 def701559e060476b29897e3c3784150 579 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 20 575 5.0E-158 T 12-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 M634_04440 def701559e060476b29897e3c3784150 579 Gene3D G3DSA:3.10.310.30 325 456 2.2E-30 T 12-10-2018 M634_14555 5c40e574ea2742f9cba8e6a6642507af 258 SMART SM01133 10 244 1.3E-78 T 12-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 M634_14555 5c40e574ea2742f9cba8e6a6642507af 258 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 230 8.5E-81 T 12-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 M634_14555 5c40e574ea2742f9cba8e6a6642507af 258 Pfam PF01791 DeoC/LacD family aldolase 11 239 2.8E-48 T 12-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 M634_14555 5c40e574ea2742f9cba8e6a6642507af 258 SUPERFAMILY SSF51569 6 245 1.15E-82 T 12-10-2018 M634_14555 5c40e574ea2742f9cba8e6a6642507af 258 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 258 52.842 T 12-10-2018 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 M634_14555 5c40e574ea2742f9cba8e6a6642507af 258 PIRSF PIRSF001357 5 251 1.6E-76 T 12-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 M634_14555 5c40e574ea2742f9cba8e6a6642507af 258 Gene3D G3DSA:3.20.20.70 1 256 2.0E-101 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_04000 4362ed51527e47f5fa2de35a106f4bc8 203 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 24 202 1.7E-53 T 12-10-2018 IPR016476 SH3 domain protein M634_04000 4362ed51527e47f5fa2de35a106f4bc8 203 PIRSF PIRSF006158 1 203 8.9E-71 T 12-10-2018 IPR016476 SH3 domain protein M634_04000 4362ed51527e47f5fa2de35a106f4bc8 203 Gene3D G3DSA:2.30.30.40 31 86 4.3E-10 T 12-10-2018 M634_04000 4362ed51527e47f5fa2de35a106f4bc8 203 Pfam PF08239 Bacterial SH3 domain 33 82 9.7E-10 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type M634_04000 4362ed51527e47f5fa2de35a106f4bc8 203 SMART SM00287 20 86 9.7E-11 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type M634_10255 150093a95460e54ab48e6a18df344426 475 Gene3D G3DSA:1.20.1740.10 8 472 7.6E-42 T 12-10-2018 M634_10255 150093a95460e54ab48e6a18df344426 475 Pfam PF13520 Amino acid permease 11 448 8.7E-53 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 M634_10255 150093a95460e54ab48e6a18df344426 475 PIRSF PIRSF006060 8 472 1.8E-54 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 M634_15820 bc48cebb66062b31e65e1383449dbe2f 241 SUPERFAMILY SSF69593 4 235 7.32E-57 T 12-10-2018 M634_15820 bc48cebb66062b31e65e1383449dbe2f 241 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 3.4E-44 T 12-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 M634_15820 bc48cebb66062b31e65e1383449dbe2f 241 SMART SM00563 67 182 6.6E-40 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 M634_15820 bc48cebb66062b31e65e1383449dbe2f 241 Pfam PF01553 Acyltransferase 58 180 6.7E-32 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 M634_02505 44c5601353e3ee3bae0119b1322ad3b7 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 86 104 1.3E-51 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 M634_02505 44c5601353e3ee3bae0119b1322ad3b7 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 9 36 1.3E-51 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 M634_02505 44c5601353e3ee3bae0119b1322ad3b7 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 104 130 1.3E-51 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 M634_02505 44c5601353e3ee3bae0119b1322ad3b7 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 155 183 1.3E-51 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 M634_02505 44c5601353e3ee3bae0119b1322ad3b7 246 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 10 227 1.3E-76 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 M634_02505 44c5601353e3ee3bae0119b1322ad3b7 246 ProSitePatterns PS01218 TatC family signature. 155 174 - T 12-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site M634_02505 44c5601353e3ee3bae0119b1322ad3b7 246 Pfam PF00902 Sec-independent protein translocase protein (TatC) 13 222 3.8E-67 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 M634_02505 44c5601353e3ee3bae0119b1322ad3b7 246 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 5 239 16.081 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 M634_13870 2b11ab47a26f662613e9d2f96e215a31 252 PIRSF PIRSF005457 1 252 7.4E-99 T 12-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 M634_13870 2b11ab47a26f662613e9d2f96e215a31 252 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 252 1.7E-103 T 12-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 M634_13870 2b11ab47a26f662613e9d2f96e215a31 252 SUPERFAMILY SSF56281 2 252 9.96E-70 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M634_13870 2b11ab47a26f662613e9d2f96e215a31 252 Pfam PF00753 Metallo-beta-lactamase superfamily 14 166 2.5E-20 T 12-10-2018 IPR001279 Metallo-beta-lactamase M634_13870 2b11ab47a26f662613e9d2f96e215a31 252 SMART SM00849 12 166 2.2E-33 T 12-10-2018 IPR001279 Metallo-beta-lactamase M634_13870 2b11ab47a26f662613e9d2f96e215a31 252 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 167 252 2.4E-26 T 12-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 M634_13870 2b11ab47a26f662613e9d2f96e215a31 252 Gene3D G3DSA:3.60.15.10 1 252 7.0E-92 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M634_13870 2b11ab47a26f662613e9d2f96e215a31 252 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 252 45.466 T 12-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 M634_08075 fe2ea6abada0f5c180216822764d93ee 88 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 85 1.4E-46 T 12-10-2018 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 M634_08075 fe2ea6abada0f5c180216822764d93ee 88 Gene3D G3DSA:3.40.30.10 1 84 1.5E-25 T 12-10-2018 M634_08075 fe2ea6abada0f5c180216822764d93ee 88 SUPERFAMILY SSF52833 3 81 3.71E-21 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M634_08075 fe2ea6abada0f5c180216822764d93ee 88 PRINTS PR00160 Glutaredoxin signature 3 21 5.3E-12 T 12-10-2018 IPR014025 Glutaredoxin subgroup M634_08075 fe2ea6abada0f5c180216822764d93ee 88 PRINTS PR00160 Glutaredoxin signature 52 65 5.3E-12 T 12-10-2018 IPR014025 Glutaredoxin subgroup M634_08075 fe2ea6abada0f5c180216822764d93ee 88 PRINTS PR00160 Glutaredoxin signature 66 79 5.3E-12 T 12-10-2018 IPR014025 Glutaredoxin subgroup M634_08075 fe2ea6abada0f5c180216822764d93ee 88 Pfam PF00462 Glutaredoxin 3 69 3.3E-16 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 M634_03145 35d6ebd0800a6919ef0968291fbb0f7e 287 Pfam PF00535 Glycosyl transferase family 2 5 156 4.1E-14 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 M634_03145 35d6ebd0800a6919ef0968291fbb0f7e 287 Gene3D G3DSA:3.90.550.10 3 191 1.3E-26 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M634_03145 35d6ebd0800a6919ef0968291fbb0f7e 287 SUPERFAMILY SSF53448 3 216 1.88E-27 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M634_18240 527973e45ea0b8fdc61cbc7e93e442db 632 SUPERFAMILY SSF47384 229 309 1.9E-21 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M634_18240 527973e45ea0b8fdc61cbc7e93e442db 632 Pfam PF17149 Periplasmic sensor domain found in signal transduction proteins 40 145 1.2E-15 T 12-10-2018 IPR033414 Periplasmic sensor domain M634_18240 527973e45ea0b8fdc61cbc7e93e442db 632 SMART SM00448 503 617 3.2E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_18240 527973e45ea0b8fdc61cbc7e93e442db 632 Pfam PF00072 Response regulator receiver domain 505 616 8.5E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_18240 527973e45ea0b8fdc61cbc7e93e442db 632 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 468 3.0E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_18240 527973e45ea0b8fdc61cbc7e93e442db 632 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 424 3.0E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_18240 527973e45ea0b8fdc61cbc7e93e442db 632 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 449 3.0E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_18240 527973e45ea0b8fdc61cbc7e93e442db 632 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 410 3.0E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_18240 527973e45ea0b8fdc61cbc7e93e442db 632 SUPERFAMILY SSF55874 297 473 2.23E-48 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_18240 527973e45ea0b8fdc61cbc7e93e442db 632 Gene3D G3DSA:3.30.565.10 307 473 5.2E-53 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_18240 527973e45ea0b8fdc61cbc7e93e442db 632 Gene3D G3DSA:1.10.287.130 209 306 4.6E-30 T 12-10-2018 M634_18240 527973e45ea0b8fdc61cbc7e93e442db 632 SUPERFAMILY SSF52172 501 622 1.28E-36 T 12-10-2018 IPR011006 CheY-like superfamily M634_18240 527973e45ea0b8fdc61cbc7e93e442db 632 SMART SM00388 243 308 8.9E-25 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_18240 527973e45ea0b8fdc61cbc7e93e442db 632 Pfam PF00512 His Kinase A (phospho-acceptor) domain 244 308 1.5E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_18240 527973e45ea0b8fdc61cbc7e93e442db 632 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 470 1.7E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_18240 527973e45ea0b8fdc61cbc7e93e442db 632 SMART SM00387 355 471 4.7E-40 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_18240 527973e45ea0b8fdc61cbc7e93e442db 632 Gene3D G3DSA:3.40.50.2300 487 624 6.2E-42 T 12-10-2018 M634_13900 5b67cca900979fc1d43c30ae9491f83a 438 Gene3D G3DSA:1.20.59.20 235 318 3.7E-26 T 12-10-2018 M634_13900 5b67cca900979fc1d43c30ae9491f83a 438 Gene3D G3DSA:3.40.50.620 12 233 1.6E-70 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M634_13900 5b67cca900979fc1d43c30ae9491f83a 438 Pfam PF01171 PP-loop family 21 199 3.5E-57 T 12-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 M634_13900 5b67cca900979fc1d43c30ae9491f83a 438 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 365 411 1.2E-14 T 12-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 M634_13900 5b67cca900979fc1d43c30ae9491f83a 438 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 21 203 1.1E-53 T 12-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 M634_13900 5b67cca900979fc1d43c30ae9491f83a 438 SUPERFAMILY SSF82829 236 319 5.1E-24 T 12-10-2018 M634_13900 5b67cca900979fc1d43c30ae9491f83a 438 Pfam PF09179 TilS substrate binding domain 248 315 9.4E-18 T 12-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 M634_13900 5b67cca900979fc1d43c30ae9491f83a 438 SMART SM00977 365 434 1.7E-21 T 12-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 M634_13900 5b67cca900979fc1d43c30ae9491f83a 438 SUPERFAMILY SSF56037 322 436 3.92E-28 T 12-10-2018 M634_13900 5b67cca900979fc1d43c30ae9491f83a 438 SUPERFAMILY SSF52402 15 233 5.51E-61 T 12-10-2018 M634_13900 5b67cca900979fc1d43c30ae9491f83a 438 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 8 309 23.145 T 12-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 M634_13900 5b67cca900979fc1d43c30ae9491f83a 438 Pfam PF11734 TilS substrate C-terminal domain 365 435 2.0E-24 T 12-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 M634_05425 6b3789497252e1be20dd4d4453bf16cc 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 164.962 T 12-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 M634_05425 6b3789497252e1be20dd4d4453bf16cc 281 TIGRFAM TIGR03138 QueF: queuine synthase 11 281 3.3E-128 T 12-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 M634_05425 6b3789497252e1be20dd4d4453bf16cc 281 Pfam PF14489 QueF-like protein 194 270 5.6E-27 T 12-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 M634_05425 6b3789497252e1be20dd4d4453bf16cc 281 PIRSF PIRSF004750 6 281 1.3E-130 T 12-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 M634_05425 6b3789497252e1be20dd4d4453bf16cc 281 Gene3D G3DSA:3.30.1130.10 21 138 2.1E-45 T 12-10-2018 M634_05425 6b3789497252e1be20dd4d4453bf16cc 281 Gene3D G3DSA:3.30.1130.10 143 281 4.1E-63 T 12-10-2018 M634_05425 6b3789497252e1be20dd4d4453bf16cc 281 SUPERFAMILY SSF55620 184 267 5.86E-10 T 12-10-2018 M634_05425 6b3789497252e1be20dd4d4453bf16cc 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 129 1.2E-48 T 12-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 M634_23590 3573038b5e184a2b081401c32f339591 430 Pfam PF00270 DEAD/DEAH box helicase 25 193 7.9E-52 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 M634_23590 3573038b5e184a2b081401c32f339591 430 Gene3D G3DSA:3.40.50.300 1 220 7.8E-75 T 12-10-2018 M634_23590 3573038b5e184a2b081401c32f339591 430 SMART SM00490 258 339 5.5E-31 T 12-10-2018 IPR001650 Helicase, C-terminal M634_23590 3573038b5e184a2b081401c32f339591 430 SUPERFAMILY SSF52540 75 356 4.85E-74 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_23590 3573038b5e184a2b081401c32f339591 430 Pfam PF00271 Helicase conserved C-terminal domain 231 339 2.9E-29 T 12-10-2018 IPR001650 Helicase, C-terminal M634_23590 3573038b5e184a2b081401c32f339591 430 Gene3D G3DSA:3.40.50.300 221 422 1.5E-48 T 12-10-2018 M634_23590 3573038b5e184a2b081401c32f339591 430 SMART SM00487 20 229 6.4E-57 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M634_23590 3573038b5e184a2b081401c32f339591 430 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site M634_24555 123e2f61e9c0325465333a71e1ec5d7f 159 PIRSF PIRSF036402 1 159 8.3E-41 T 12-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 M634_24555 123e2f61e9c0325465333a71e1ec5d7f 159 Pfam PF02814 UreE urease accessory protein, N-terminal domain 23 69 2.0E-15 T 12-10-2018 IPR004029 UreE urease accessory, N-terminal M634_24555 123e2f61e9c0325465333a71e1ec5d7f 159 SUPERFAMILY SSF69287 1 76 2.49E-17 T 12-10-2018 IPR036118 UreE urease accessory, N-terminal domain superfamily M634_24555 123e2f61e9c0325465333a71e1ec5d7f 159 Gene3D G3DSA:2.60.260.20 1 77 2.6E-21 T 12-10-2018 M634_24555 123e2f61e9c0325465333a71e1ec5d7f 159 Pfam PF05194 UreE urease accessory protein, C-terminal domain 83 158 1.3E-22 T 12-10-2018 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0016151|GO:0019627|GO:0065003 M634_24555 123e2f61e9c0325465333a71e1ec5d7f 159 Gene3D G3DSA:3.30.70.790 78 148 8.3E-27 T 12-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 M634_24555 123e2f61e9c0325465333a71e1ec5d7f 159 SUPERFAMILY SSF69737 78 144 1.83E-18 T 12-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 M634_24555 123e2f61e9c0325465333a71e1ec5d7f 159 Hamap MF_00822 Urease accessory protein UreE [ureE]. 2 145 22.036 T 12-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 M634_24555 123e2f61e9c0325465333a71e1ec5d7f 159 SMART SM00988 7 71 9.6E-16 T 12-10-2018 IPR004029 UreE urease accessory, N-terminal M634_06335 5ef215bef5410c0e8605ed75bf6d2316 233 SUPERFAMILY SSF53067 4 107 4.27E-32 T 12-10-2018 M634_06335 5ef215bef5410c0e8605ed75bf6d2316 233 Gene3D G3DSA:3.30.420.40 5 202 9.0E-88 T 12-10-2018 M634_06335 5ef215bef5410c0e8605ed75bf6d2316 233 Pfam PF00814 Glycoprotease family 30 174 1.8E-32 T 12-10-2018 IPR000905 Gcp-like domain M634_06335 5ef215bef5410c0e8605ed75bf6d2316 233 SUPERFAMILY SSF53067 111 219 3.88E-28 T 12-10-2018 M634_06335 5ef215bef5410c0e8605ed75bf6d2316 233 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 221 7.7E-70 T 12-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 M634_06335 5ef215bef5410c0e8605ed75bf6d2316 233 Gene3D G3DSA:3.30.420.40 96 190 9.0E-88 T 12-10-2018 M634_21680 a13dd9120e1f8210cbbac66aa238270b 178 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 2.4E-9 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M634_21680 a13dd9120e1f8210cbbac66aa238270b 178 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 9.6E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M634_21680 a13dd9120e1f8210cbbac66aa238270b 178 SUPERFAMILY SSF54523 7 107 2.35E-14 T 12-10-2018 M634_21680 a13dd9120e1f8210cbbac66aa238270b 178 Gene3D G3DSA:3.30.700.10 7 175 4.2E-13 T 12-10-2018 M634_21680 a13dd9120e1f8210cbbac66aa238270b 178 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M634_10825 407d9feab348e03fd2cb5384d904388b 194 Gene3D G3DSA:2.40.50.140 1 68 1.7E-16 T 12-10-2018 M634_10825 407d9feab348e03fd2cb5384d904388b 194 ProSitePatterns PS00352 'Cold-shock' domain signature. 14 33 - T 12-10-2018 IPR019844 Cold-shock conserved site M634_10825 407d9feab348e03fd2cb5384d904388b 194 Pfam PF00313 'Cold-shock' DNA-binding domain 2 64 2.2E-13 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 M634_10825 407d9feab348e03fd2cb5384d904388b 194 SUPERFAMILY SSF50249 2 67 9.55E-15 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_10825 407d9feab348e03fd2cb5384d904388b 194 SMART SM00357 2 66 5.3E-8 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 M634_10825 407d9feab348e03fd2cb5384d904388b 194 Pfam PF06961 Protein of unknown function (DUF1294) 106 160 5.6E-24 T 12-10-2018 IPR010718 Protein of unknown function DUF1294 M634_22130 455869b9434c84f65449ac2d99ede68d 404 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 M634_22130 455869b9434c84f65449ac2d99ede68d 404 SUPERFAMILY SSF51161 312 395 2.21E-17 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily M634_22130 455869b9434c84f65449ac2d99ede68d 404 Gene3D G3DSA:3.90.550.10 1 286 8.2E-94 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M634_22130 455869b9434c84f65449ac2d99ede68d 404 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 96 104 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 M634_22130 455869b9434c84f65449ac2d99ede68d 404 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 404 50.029 T 12-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 M634_22130 455869b9434c84f65449ac2d99ede68d 404 SUPERFAMILY SSF53448 4 357 3.75E-79 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M634_22130 455869b9434c84f65449ac2d99ede68d 404 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 5 378 8.7E-158 T 12-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 M634_22130 455869b9434c84f65449ac2d99ede68d 404 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 194 204 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 M634_22130 455869b9434c84f65449ac2d99ede68d 404 Pfam PF00483 Nucleotidyl transferase 6 272 1.3E-70 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 M634_22130 455869b9434c84f65449ac2d99ede68d 404 Gene3D G3DSA:2.160.10.10 287 403 4.5E-33 T 12-10-2018 M634_08795 2c71b5c6ee5f1690b49190022aba605c 200 SMART SM00702 11 187 2.9E-34 T 12-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 M634_08795 2c71b5c6ee5f1690b49190022aba605c 200 Gene3D G3DSA:2.60.120.620 1 189 1.9E-53 T 12-10-2018 M634_08795 2c71b5c6ee5f1690b49190022aba605c 200 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 97 187 2.1E-21 T 12-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 M634_05495 60ab413049b5299bf457a377ae69bd74 220 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 70 85 - T 12-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 M634_05495 60ab413049b5299bf457a377ae69bd74 220 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 26 202 5.9E-73 T 12-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 M634_05495 60ab413049b5299bf457a377ae69bd74 220 PIRSF PIRSF016262 1 216 5.2E-63 T 12-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 M634_05495 60ab413049b5299bf457a377ae69bd74 220 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 74 127 2.0E-25 T 12-10-2018 M634_05495 60ab413049b5299bf457a377ae69bd74 220 Pfam PF03099 Biotin/lipoate A/B protein ligase family 59 158 6.4E-8 T 12-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 M634_05495 60ab413049b5299bf457a377ae69bd74 220 Hamap MF_00013 Octanoyltransferase [lipB]. 4 205 38.262 T 12-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 M634_05495 60ab413049b5299bf457a377ae69bd74 220 SUPERFAMILY SSF55681 2 204 2.4E-71 T 12-10-2018 M634_05495 60ab413049b5299bf457a377ae69bd74 220 Gene3D G3DSA:3.30.930.10 1 203 9.2E-65 T 12-10-2018 M634_21640 92c703b1357d9a2e0bf865c1905f6a3a 198 ProSitePatterns PS00622 LuxR-type HTH domain signature. 156 183 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_21640 92c703b1357d9a2e0bf865c1905f6a3a 198 Pfam PF00072 Response regulator receiver domain 7 117 1.5E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_21640 92c703b1357d9a2e0bf865c1905f6a3a 198 SMART SM00421 139 196 2.0E-17 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_21640 92c703b1357d9a2e0bf865c1905f6a3a 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 3.6E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_21640 92c703b1357d9a2e0bf865c1905f6a3a 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 3.6E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_21640 92c703b1357d9a2e0bf865c1905f6a3a 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 3.6E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_21640 92c703b1357d9a2e0bf865c1905f6a3a 198 SMART SM00448 4 117 3.3E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_21640 92c703b1357d9a2e0bf865c1905f6a3a 198 Gene3D G3DSA:3.40.50.2300 1 138 5.4E-27 T 12-10-2018 M634_21640 92c703b1357d9a2e0bf865c1905f6a3a 198 Pfam PF00196 Bacterial regulatory proteins, luxR family 141 196 1.1E-20 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_21640 92c703b1357d9a2e0bf865c1905f6a3a 198 Gene3D G3DSA:1.10.10.10 139 197 3.2E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_21640 92c703b1357d9a2e0bf865c1905f6a3a 198 SUPERFAMILY SSF52172 1 126 1.57E-27 T 12-10-2018 IPR011006 CheY-like superfamily M634_21640 92c703b1357d9a2e0bf865c1905f6a3a 198 SUPERFAMILY SSF46894 129 196 6.12E-17 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M634_16830 b0d88c993b61e646ada9be2c5b827fa7 270 Pfam PF13411 MerR HTH family regulatory protein 10 76 9.5E-17 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M634_16830 b0d88c993b61e646ada9be2c5b827fa7 270 Gene3D G3DSA:1.10.1660.10 4 76 4.8E-24 T 12-10-2018 M634_16830 b0d88c993b61e646ada9be2c5b827fa7 270 SUPERFAMILY SSF46955 10 100 1.05E-16 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily M634_16830 b0d88c993b61e646ada9be2c5b827fa7 270 SMART SM00422 10 79 2.6E-16 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M634_12475 37dbe4447b269cc7d84825b9c337f58e 307 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 4.2E-127 T 12-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 M634_12475 37dbe4447b269cc7d84825b9c337f58e 307 SUPERFAMILY SSF52151 4 305 1.44E-82 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase M634_12475 37dbe4447b269cc7d84825b9c337f58e 307 Gene3D G3DSA:3.30.70.250 125 197 8.7E-108 T 12-10-2018 M634_12475 37dbe4447b269cc7d84825b9c337f58e 307 SUPERFAMILY SSF55048 128 197 9.16E-19 T 12-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding M634_12475 37dbe4447b269cc7d84825b9c337f58e 307 Gene3D G3DSA:3.40.366.10 7 286 8.7E-108 T 12-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 M634_12475 37dbe4447b269cc7d84825b9c337f58e 307 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 307 5.1E-45 T 12-10-2018 IPR020801 Polyketide synthase, acyl transferase domain M634_12475 37dbe4447b269cc7d84825b9c337f58e 307 Pfam PF00698 Acyl transferase domain 7 291 2.6E-39 T 12-10-2018 IPR014043 Acyl transferase M634_12475 37dbe4447b269cc7d84825b9c337f58e 307 PIRSF PIRSF000446 1 307 5.8E-137 T 12-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 M634_17010 825c241ba4a03bc4b0ba7a67c527551e 774 Gene3D G3DSA:3.30.70.270 341 520 7.9E-57 T 12-10-2018 M634_17010 825c241ba4a03bc4b0ba7a67c527551e 774 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 343 505 3.8E-41 T 12-10-2018 IPR000160 GGDEF domain M634_17010 825c241ba4a03bc4b0ba7a67c527551e 774 SMART SM00052 518 763 4.0E-104 T 12-10-2018 IPR001633 EAL domain M634_17010 825c241ba4a03bc4b0ba7a67c527551e 774 SUPERFAMILY SSF141868 523 771 2.62E-83 T 12-10-2018 IPR035919 EAL domain superfamily M634_17010 825c241ba4a03bc4b0ba7a67c527551e 774 Pfam PF00563 EAL domain 524 758 3.7E-68 T 12-10-2018 IPR001633 EAL domain M634_17010 825c241ba4a03bc4b0ba7a67c527551e 774 Gene3D G3DSA:3.20.20.450 521 772 8.1E-93 T 12-10-2018 IPR035919 EAL domain superfamily M634_17010 825c241ba4a03bc4b0ba7a67c527551e 774 Pfam PF00990 Diguanylate cyclase, GGDEF domain 347 503 9.0E-48 T 12-10-2018 IPR000160 GGDEF domain M634_17010 825c241ba4a03bc4b0ba7a67c527551e 774 SMART SM00267 336 508 9.7E-58 T 12-10-2018 IPR000160 GGDEF domain M634_17010 825c241ba4a03bc4b0ba7a67c527551e 774 SUPERFAMILY SSF55073 352 510 1.88E-50 T 12-10-2018 IPR029787 Nucleotide cyclase M634_12570 02b1f053570c1a4414f0fb4463ea2f68 202 Pfam PF02810 SEC-C motif 184 202 1.5E-9 T 12-10-2018 IPR004027 SEC-C motif M634_12570 02b1f053570c1a4414f0fb4463ea2f68 202 Gene3D G3DSA:3.10.450.50 163 202 9.5E-9 T 12-10-2018 M634_12570 02b1f053570c1a4414f0fb4463ea2f68 202 Pfam PF03695 Uncharacterised protein family (UPF0149) 20 154 5.4E-8 T 12-10-2018 IPR011978 Uncharacterised protein family UPF0149 M634_12570 02b1f053570c1a4414f0fb4463ea2f68 202 SUPERFAMILY SSF103642 182 201 2.13E-7 T 12-10-2018 M634_17640 24ded872e733948f26f640d0438f354b 343 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 30 79 3.4E-13 T 12-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain M634_17640 24ded872e733948f26f640d0438f354b 343 Pfam PF01610 Transposase 95 334 5.2E-65 T 12-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain M634_09760 24ded872e733948f26f640d0438f354b 343 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 30 79 3.4E-13 T 12-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain M634_09760 24ded872e733948f26f640d0438f354b 343 Pfam PF01610 Transposase 95 334 5.2E-65 T 12-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain M634_18990 24ded872e733948f26f640d0438f354b 343 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 30 79 3.4E-13 T 12-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain M634_18990 24ded872e733948f26f640d0438f354b 343 Pfam PF01610 Transposase 95 334 5.2E-65 T 12-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain M634_02695 2b3f37d161511b670d9143f4de06245d 227 Gene3D G3DSA:2.10.70.20 162 210 2.7E-17 T 12-10-2018 M634_02695 2b3f37d161511b670d9143f4de06245d 227 SUPERFAMILY SSF54523 49 212 1.49E-58 T 12-10-2018 M634_02695 2b3f37d161511b670d9143f4de06245d 227 Pfam PF07963 Prokaryotic N-terminal methylation motif 12 38 1.1E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M634_02695 2b3f37d161511b670d9143f4de06245d 227 Pfam PF11612 Type II secretion system (T2SS), protein J 68 205 1.5E-40 T 12-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 M634_02695 2b3f37d161511b670d9143f4de06245d 227 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 16 36 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M634_02695 2b3f37d161511b670d9143f4de06245d 227 Gene3D G3DSA:3.10.610.10 47 160 2.0E-35 T 12-10-2018 M634_02695 2b3f37d161511b670d9143f4de06245d 227 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 16 38 2.4E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M634_02695 2b3f37d161511b670d9143f4de06245d 227 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 16 207 1.5E-80 T 12-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 M634_00320 445e4e1a7cd80b4ad7b41193e24e498d 158 Gene3D G3DSA:1.20.1260.10 1 158 1.1E-71 T 12-10-2018 IPR012347 Ferritin-like M634_00320 445e4e1a7cd80b4ad7b41193e24e498d 158 PIRSF PIRSF002560 1 157 9.3E-74 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 M634_00320 445e4e1a7cd80b4ad7b41193e24e498d 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 157 2.3E-82 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 M634_00320 445e4e1a7cd80b4ad7b41193e24e498d 158 SUPERFAMILY SSF47240 1 153 1.52E-55 T 12-10-2018 IPR009078 Ferritin-like superfamily M634_00320 445e4e1a7cd80b4ad7b41193e24e498d 158 PRINTS PR00601 Bacterioferritin signature 23 43 1.1E-72 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 M634_00320 445e4e1a7cd80b4ad7b41193e24e498d 158 PRINTS PR00601 Bacterioferritin signature 86 106 1.1E-72 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 M634_00320 445e4e1a7cd80b4ad7b41193e24e498d 158 PRINTS PR00601 Bacterioferritin signature 44 64 1.1E-72 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 M634_00320 445e4e1a7cd80b4ad7b41193e24e498d 158 PRINTS PR00601 Bacterioferritin signature 107 127 1.1E-72 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 M634_00320 445e4e1a7cd80b4ad7b41193e24e498d 158 PRINTS PR00601 Bacterioferritin signature 3 22 1.1E-72 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 M634_00320 445e4e1a7cd80b4ad7b41193e24e498d 158 PRINTS PR00601 Bacterioferritin signature 65 85 1.1E-72 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 M634_00320 445e4e1a7cd80b4ad7b41193e24e498d 158 PRINTS PR00601 Bacterioferritin signature 128 149 1.1E-72 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 M634_00320 445e4e1a7cd80b4ad7b41193e24e498d 158 Pfam PF00210 Ferritin-like domain 8 143 1.9E-40 T 12-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 M634_00320 445e4e1a7cd80b4ad7b41193e24e498d 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 M634_06580 09b73a531aac184d20ed7e151a712d24 600 SMART SM00387 483 593 4.2E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_06580 09b73a531aac184d20ed7e151a712d24 600 SUPERFAMILY SSF47384 367 440 3.34E-12 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M634_06580 09b73a531aac184d20ed7e151a712d24 600 Gene3D G3DSA:3.30.565.10 441 599 8.8E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_06580 09b73a531aac184d20ed7e151a712d24 600 SUPERFAMILY SSF55874 440 592 3.14E-31 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_06580 09b73a531aac184d20ed7e151a712d24 600 Pfam PF00512 His Kinase A (phospho-acceptor) domain 373 439 5.6E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_06580 09b73a531aac184d20ed7e151a712d24 600 SMART SM00388 372 440 2.1E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_06580 09b73a531aac184d20ed7e151a712d24 600 Gene3D G3DSA:3.30.450.20 41 279 1.6E-81 T 12-10-2018 M634_06580 09b73a531aac184d20ed7e151a712d24 600 Gene3D G3DSA:3.30.450.20 54 175 1.6E-81 T 12-10-2018 M634_06580 09b73a531aac184d20ed7e151a712d24 600 SUPERFAMILY SSF103190 48 187 7.85E-29 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily M634_06580 09b73a531aac184d20ed7e151a712d24 600 Pfam PF02743 Cache domain 37 218 1.6E-12 T 12-10-2018 IPR033479 Double Cache domain 1 M634_06580 09b73a531aac184d20ed7e151a712d24 600 PIRSF PIRSF036431 1 599 2.4E-191 T 12-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) M634_06580 09b73a531aac184d20ed7e151a712d24 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 542 552 2.7E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_06580 09b73a531aac184d20ed7e151a712d24 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 524 538 2.7E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_06580 09b73a531aac184d20ed7e151a712d24 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 553 571 2.7E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_06580 09b73a531aac184d20ed7e151a712d24 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 577 590 2.7E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_06580 09b73a531aac184d20ed7e151a712d24 600 Gene3D G3DSA:1.10.287.130 348 435 1.1E-19 T 12-10-2018 M634_06580 09b73a531aac184d20ed7e151a712d24 600 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 486 590 2.5E-15 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_00710 f04588872ef17d39faf46cc9c3f61218 323 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 14 318 2.8E-128 T 12-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 M634_00710 f04588872ef17d39faf46cc9c3f61218 323 Gene3D G3DSA:3.30.930.10 1 322 5.6E-110 T 12-10-2018 M634_00710 f04588872ef17d39faf46cc9c3f61218 323 SUPERFAMILY SSF55681 11 320 1.07E-80 T 12-10-2018 M634_00710 f04588872ef17d39faf46cc9c3f61218 323 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 1 323 53.259 T 12-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 M634_00710 f04588872ef17d39faf46cc9c3f61218 323 Pfam PF00152 tRNA synthetases class II (D, K and N) 12 319 4.5E-45 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 M634_04895 619fdebba257f5cd78a35a68b93fcf2c 617 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 M634_04895 619fdebba257f5cd78a35a68b93fcf2c 617 PRINTS PR00301 70kDa heat shock protein signature 20 33 1.2E-52 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M634_04895 619fdebba257f5cd78a35a68b93fcf2c 617 PRINTS PR00301 70kDa heat shock protein signature 360 380 1.2E-52 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M634_04895 619fdebba257f5cd78a35a68b93fcf2c 617 PRINTS PR00301 70kDa heat shock protein signature 152 172 1.2E-52 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M634_04895 619fdebba257f5cd78a35a68b93fcf2c 617 PRINTS PR00301 70kDa heat shock protein signature 329 345 1.2E-52 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M634_04895 619fdebba257f5cd78a35a68b93fcf2c 617 PRINTS PR00301 70kDa heat shock protein signature 466 482 1.2E-52 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M634_04895 619fdebba257f5cd78a35a68b93fcf2c 617 PRINTS PR00301 70kDa heat shock protein signature 211 221 1.2E-52 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M634_04895 619fdebba257f5cd78a35a68b93fcf2c 617 PRINTS PR00301 70kDa heat shock protein signature 385 404 1.2E-52 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M634_04895 619fdebba257f5cd78a35a68b93fcf2c 617 PRINTS PR00301 70kDa heat shock protein signature 48 60 1.2E-52 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M634_04895 619fdebba257f5cd78a35a68b93fcf2c 617 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 M634_04895 619fdebba257f5cd78a35a68b93fcf2c 617 Gene3D G3DSA:3.30.420.40 23 374 1.1E-111 T 12-10-2018 M634_04895 619fdebba257f5cd78a35a68b93fcf2c 617 SUPERFAMILY SSF53067 19 196 2.46E-50 T 12-10-2018 M634_04895 619fdebba257f5cd78a35a68b93fcf2c 617 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 617 46.623 T 12-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 M634_04895 619fdebba257f5cd78a35a68b93fcf2c 617 Gene3D G3DSA:1.20.1270.10 521 616 3.8E-26 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 M634_04895 619fdebba257f5cd78a35a68b93fcf2c 617 SUPERFAMILY SSF53067 200 377 1.43E-49 T 12-10-2018 M634_04895 619fdebba257f5cd78a35a68b93fcf2c 617 SUPERFAMILY SSF100934 504 616 1.75E-34 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 M634_04895 619fdebba257f5cd78a35a68b93fcf2c 617 SUPERFAMILY SSF100920 384 537 1.02E-51 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 M634_04895 619fdebba257f5cd78a35a68b93fcf2c 617 Gene3D G3DSA:3.90.640.10 238 311 1.1E-111 T 12-10-2018 M634_04895 619fdebba257f5cd78a35a68b93fcf2c 617 Gene3D G3DSA:2.60.34.10 379 520 6.2E-50 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 M634_04895 619fdebba257f5cd78a35a68b93fcf2c 617 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 616 5.1E-269 T 12-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 M634_04895 619fdebba257f5cd78a35a68b93fcf2c 617 Pfam PF00012 Hsp70 protein 22 601 6.4E-191 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M634_04895 619fdebba257f5cd78a35a68b93fcf2c 617 Gene3D G3DSA:3.30.420.40 194 361 1.1E-111 T 12-10-2018 M634_21815 164b4731dcb60509acb2f086e8afabc4 128 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 12-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 M634_21815 164b4731dcb60509acb2f086e8afabc4 128 SUPERFAMILY SSF54593 1 126 4.43E-37 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M634_21815 164b4731dcb60509acb2f086e8afabc4 128 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 128 1.1E-59 T 12-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 M634_21815 164b4731dcb60509acb2f086e8afabc4 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 1.4E-23 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain M634_21815 164b4731dcb60509acb2f086e8afabc4 128 ProSitePatterns PS00935 Glyoxalase I signature 2. 69 81 - T 12-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 M634_21815 164b4731dcb60509acb2f086e8afabc4 128 Gene3D G3DSA:3.10.180.10 1 128 2.0E-48 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M634_14365 d1ea10c7beba024235a3ce1fca3b8d16 341 SUPERFAMILY SSF47413 3 60 1.27E-12 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M634_14365 d1ea10c7beba024235a3ce1fca3b8d16 341 Pfam PF13377 Periplasmic binding protein-like domain 172 333 7.8E-35 T 12-10-2018 M634_14365 d1ea10c7beba024235a3ce1fca3b8d16 341 SMART SM00354 4 74 7.4E-12 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M634_14365 d1ea10c7beba024235a3ce1fca3b8d16 341 Gene3D G3DSA:3.40.50.2300 163 293 2.3E-57 T 12-10-2018 M634_14365 d1ea10c7beba024235a3ce1fca3b8d16 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 4.4E-13 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M634_14365 d1ea10c7beba024235a3ce1fca3b8d16 341 Gene3D G3DSA:3.40.50.2300 82 319 2.3E-57 T 12-10-2018 M634_14365 d1ea10c7beba024235a3ce1fca3b8d16 341 Gene3D G3DSA:1.10.260.40 1 63 1.2E-18 T 12-10-2018 M634_14365 d1ea10c7beba024235a3ce1fca3b8d16 341 SUPERFAMILY SSF53822 65 334 1.96E-60 T 12-10-2018 IPR028082 Periplasmic binding protein-like I M634_14365 d1ea10c7beba024235a3ce1fca3b8d16 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 12-10-2018 M634_04765 eecdb2051d219e5213dbcd51a88ea2e4 501 SUPERFAMILY SSF53067 12 131 1.18E-35 T 12-10-2018 M634_04765 eecdb2051d219e5213dbcd51a88ea2e4 501 Gene3D G3DSA:3.30.420.150 116 294 2.4E-89 T 12-10-2018 M634_04765 eecdb2051d219e5213dbcd51a88ea2e4 501 SUPERFAMILY SSF53067 136 308 3.02E-46 T 12-10-2018 M634_04765 eecdb2051d219e5213dbcd51a88ea2e4 501 SUPERFAMILY SSF109604 312 500 1.13E-47 T 12-10-2018 M634_04765 eecdb2051d219e5213dbcd51a88ea2e4 501 Gene3D G3DSA:3.30.420.40 13 302 2.4E-89 T 12-10-2018 M634_04765 eecdb2051d219e5213dbcd51a88ea2e4 501 Gene3D G3DSA:1.10.3210.10 310 501 2.4E-56 T 12-10-2018 M634_04765 eecdb2051d219e5213dbcd51a88ea2e4 501 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 12 305 2.0E-100 T 12-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 M634_04765 eecdb2051d219e5213dbcd51a88ea2e4 501 PIRSF PIRSF001267 2 501 3.5E-201 T 12-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 M634_04765 eecdb2051d219e5213dbcd51a88ea2e4 501 Pfam PF02541 Ppx/GppA phosphatase family 25 307 8.0E-85 T 12-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 M634_02655 7ad16bedf9ae74d4ab0faf37c4388474 128 PIRSF PIRSF016821 5 128 2.4E-42 T 12-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 M634_02655 7ad16bedf9ae74d4ab0faf37c4388474 128 SMART SM00363 8 71 1.4E-11 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_02655 7ad16bedf9ae74d4ab0faf37c4388474 128 SUPERFAMILY SSF55174 8 105 4.84E-31 T 12-10-2018 M634_02655 7ad16bedf9ae74d4ab0faf37c4388474 128 Gene3D G3DSA:3.10.290.10 3 107 7.2E-37 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 M634_02655 7ad16bedf9ae74d4ab0faf37c4388474 128 Pfam PF01479 S4 domain 8 54 4.0E-13 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_00290 4cf93ac04495568eca1b69696611cc25 179 Pfam PF10400 Virulence activator alpha C-term 92 176 6.0E-15 T 12-10-2018 IPR018309 Transcription regulator PadR, C-terminal M634_00290 4cf93ac04495568eca1b69696611cc25 179 SUPERFAMILY SSF46785 3 176 1.04E-43 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_00290 4cf93ac04495568eca1b69696611cc25 179 Gene3D G3DSA:1.10.10.10 1 89 6.4E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_00290 4cf93ac04495568eca1b69696611cc25 179 Pfam PF03551 Transcriptional regulator PadR-like family 7 80 1.1E-15 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal M634_00655 46609d35b69e038d62b3e82f42ad0e3a 295 Pfam PF00892 EamA-like transporter family 4 135 7.2E-17 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M634_00655 46609d35b69e038d62b3e82f42ad0e3a 295 Pfam PF00892 EamA-like transporter family 156 294 3.8E-17 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M634_00655 46609d35b69e038d62b3e82f42ad0e3a 295 SUPERFAMILY SSF103481 202 293 9.68E-11 T 12-10-2018 M634_00655 46609d35b69e038d62b3e82f42ad0e3a 295 SUPERFAMILY SSF103481 36 140 5.1E-13 T 12-10-2018 M634_00890 e50ed698f3ecdf3a02bacde8b63d15bc 608 Gene3D G3DSA:3.10.580.10 140 288 1.0E-15 T 12-10-2018 M634_00890 e50ed698f3ecdf3a02bacde8b63d15bc 608 Gene3D G3DSA:2.60.120.10 5 139 4.1E-12 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M634_00890 e50ed698f3ecdf3a02bacde8b63d15bc 608 SUPERFAMILY SSF51206 8 128 5.11E-16 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like M634_00890 e50ed698f3ecdf3a02bacde8b63d15bc 608 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 471 604 5.7E-39 T 12-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding M634_00890 e50ed698f3ecdf3a02bacde8b63d15bc 608 Pfam PF03445 Putative nucleotidyltransferase DUF294 302 433 2.4E-42 T 12-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 M634_00890 e50ed698f3ecdf3a02bacde8b63d15bc 608 Pfam PF00027 Cyclic nucleotide-binding domain 31 113 4.6E-9 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain M634_00890 e50ed698f3ecdf3a02bacde8b63d15bc 608 SUPERFAMILY SSF54631 144 276 6.29E-16 T 12-10-2018 M634_17955 4e9117a865166eea6ec6b0e9956c6762 263 SMART SM00345 21 80 5.3E-22 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_17955 4e9117a865166eea6ec6b0e9956c6762 263 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 80 4.5E-21 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_17955 4e9117a865166eea6ec6b0e9956c6762 263 Pfam PF07729 FCD domain 102 228 2.9E-21 T 12-10-2018 IPR011711 GntR, C-terminal M634_17955 4e9117a865166eea6ec6b0e9956c6762 263 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 54 70 3.9E-8 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_17955 4e9117a865166eea6ec6b0e9956c6762 263 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 54 3.9E-8 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_17955 4e9117a865166eea6ec6b0e9956c6762 263 SMART SM00895 102 229 1.0E-20 T 12-10-2018 IPR011711 GntR, C-terminal M634_17955 4e9117a865166eea6ec6b0e9956c6762 263 Gene3D G3DSA:1.20.120.530 101 240 2.4E-24 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal M634_17955 4e9117a865166eea6ec6b0e9956c6762 263 Gene3D G3DSA:1.10.10.10 12 83 2.9E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_17955 4e9117a865166eea6ec6b0e9956c6762 263 SUPERFAMILY SSF46785 14 107 7.79E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_17955 4e9117a865166eea6ec6b0e9956c6762 263 SUPERFAMILY SSF48008 100 237 4.18E-28 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal M634_07100 07e29650901022d210b20f6c9cab5eca 426 Gene3D G3DSA:3.65.10.10 20 224 6.4E-160 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 M634_07100 07e29650901022d210b20f6c9cab5eca 426 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 424 1.6E-142 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 M634_07100 07e29650901022d210b20f6c9cab5eca 426 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 421 7.2E-157 T 12-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 M634_07100 07e29650901022d210b20f6c9cab5eca 426 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 12-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 M634_07100 07e29650901022d210b20f6c9cab5eca 426 PIRSF PIRSF000505 1 426 5.8E-155 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 M634_07100 07e29650901022d210b20f6c9cab5eca 426 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 12-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 M634_07100 07e29650901022d210b20f6c9cab5eca 426 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 426 34.525 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 M634_07100 07e29650901022d210b20f6c9cab5eca 426 SUPERFAMILY SSF55205 1 424 1.7E-144 T 12-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 M634_07100 07e29650901022d210b20f6c9cab5eca 426 Gene3D G3DSA:3.65.10.10 242 419 6.4E-160 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 M634_01100 2e3822f8edb8a3fb7c93648ac256d428 162 SUPERFAMILY SSF160369 4 159 1.12E-44 T 12-10-2018 M634_01100 2e3822f8edb8a3fb7c93648ac256d428 162 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 159 24.068 T 12-10-2018 IPR022973 Ribosomal protein L10 M634_01100 2e3822f8edb8a3fb7c93648ac256d428 162 Pfam PF00466 Ribosomal protein L10 5 101 6.9E-27 T 12-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 M634_01100 2e3822f8edb8a3fb7c93648ac256d428 162 Gene3D G3DSA:3.30.70.1730 1 124 6.0E-35 T 12-10-2018 M634_14415 fcbfcfdd9da8c314a3b519b1f3204039 379 PIRSF PIRSF004810 1 379 1.4E-115 T 12-10-2018 IPR014047 Chromate transporter, long chain M634_14415 fcbfcfdd9da8c314a3b519b1f3204039 379 TIGRFAM TIGR00937 2A51: chromate efflux transporter 8 369 1.3E-91 T 12-10-2018 IPR014047 Chromate transporter, long chain M634_14415 fcbfcfdd9da8c314a3b519b1f3204039 379 Pfam PF02417 Chromate transporter 3 168 2.4E-33 T 12-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 M634_14415 fcbfcfdd9da8c314a3b519b1f3204039 379 Pfam PF02417 Chromate transporter 212 373 3.7E-34 T 12-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 M634_06490 b67a71ff805c56542b248c3472981ebb 259 Pfam PF01553 Acyltransferase 79 193 7.5E-15 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 M634_06490 b67a71ff805c56542b248c3472981ebb 259 SUPERFAMILY SSF69593 5 253 2.75E-24 T 12-10-2018 M634_06490 b67a71ff805c56542b248c3472981ebb 259 SMART SM00563 90 200 7.8E-13 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 M634_12280 416ac897ae8423bde64af07125100c0f 443 Pfam PF04403 Paraquat-inducible protein A 49 208 1.5E-38 T 12-10-2018 IPR007498 Intermembrane transport protein PqiA-like M634_12280 416ac897ae8423bde64af07125100c0f 443 Pfam PF04403 Paraquat-inducible protein A 265 422 8.7E-54 T 12-10-2018 IPR007498 Intermembrane transport protein PqiA-like M634_12280 416ac897ae8423bde64af07125100c0f 443 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 8 422 2.2E-104 T 12-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type M634_00635 a05fe7f78c469ec43bcf2de4c1c55769 354 Gene3D G3DSA:3.40.50.300 103 276 3.4E-49 T 12-10-2018 M634_00635 a05fe7f78c469ec43bcf2de4c1c55769 354 Pfam PF03193 RsgA GTPase 100 277 1.8E-57 T 12-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 M634_00635 a05fe7f78c469ec43bcf2de4c1c55769 354 Gene3D G3DSA:1.10.40.50 277 351 8.9E-25 T 12-10-2018 M634_00635 a05fe7f78c469ec43bcf2de4c1c55769 354 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 41 341 37.418 T 12-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 M634_00635 a05fe7f78c469ec43bcf2de4c1c55769 354 Gene3D G3DSA:2.40.50.140 36 102 1.2E-21 T 12-10-2018 M634_00635 a05fe7f78c469ec43bcf2de4c1c55769 354 SUPERFAMILY SSF52540 114 337 1.6E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_00635 a05fe7f78c469ec43bcf2de4c1c55769 354 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 75 335 1.5E-90 T 12-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 M634_08985 65b5bbe352059431cd250a1edd1baba1 148 Gene3D G3DSA:3.30.1460.10 1 131 6.6E-30 T 12-10-2018 M634_08985 65b5bbe352059431cd250a1edd1baba1 148 Pfam PF05932 Tir chaperone protein (CesT) family 10 124 1.3E-13 T 12-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 M634_08985 65b5bbe352059431cd250a1edd1baba1 148 SUPERFAMILY SSF69635 4 134 9.42E-26 T 12-10-2018 M634_16320 ae8933ab5e0d75e1219b2efc510c98f4 234 Gene3D G3DSA:3.20.20.450 1 234 2.3E-58 T 12-10-2018 IPR035919 EAL domain superfamily M634_16320 ae8933ab5e0d75e1219b2efc510c98f4 234 SUPERFAMILY SSF141868 4 230 5.89E-58 T 12-10-2018 IPR035919 EAL domain superfamily M634_16320 ae8933ab5e0d75e1219b2efc510c98f4 234 Pfam PF00563 EAL domain 5 228 7.1E-52 T 12-10-2018 IPR001633 EAL domain M634_16320 ae8933ab5e0d75e1219b2efc510c98f4 234 SMART SM00052 1 233 9.3E-37 T 12-10-2018 IPR001633 EAL domain M634_19645 07bcc14f80757e2e3c3aaf76cfbb2fa3 806 Gene3D G3DSA:2.70.98.10 44 396 5.1E-206 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 M634_19645 07bcc14f80757e2e3c3aaf76cfbb2fa3 806 SUPERFAMILY SSF48208 307 776 2.04E-21 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 M634_19645 07bcc14f80757e2e3c3aaf76cfbb2fa3 806 Gene3D G3DSA:3.30.2080.10 342 796 5.1E-206 T 12-10-2018 M634_19645 07bcc14f80757e2e3c3aaf76cfbb2fa3 806 Gene3D G3DSA:1.20.1050.60 397 499 5.1E-206 T 12-10-2018 M634_19645 07bcc14f80757e2e3c3aaf76cfbb2fa3 806 Pfam PF07971 Glycosyl hydrolase family 92 285 793 3.4E-138 T 12-10-2018 IPR012939 Glycosyl hydrolase family 92 M634_19645 07bcc14f80757e2e3c3aaf76cfbb2fa3 806 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 41 794 2.8E-149 T 12-10-2018 IPR005887 Alpha-1,2-mannosidase, putative M634_19645 07bcc14f80757e2e3c3aaf76cfbb2fa3 806 Gene3D G3DSA:1.20.1610.10 500 669 5.1E-206 T 12-10-2018 M634_21590 af9defc878d5171f7ae7f4bbf7cf9c21 180 Pfam PF07811 TadE-like protein 7 48 3.2E-5 T 12-10-2018 IPR012495 TadE-like M634_06055 d5c9c29f971e473e916457c2b081e97b 1254 Gene3D G3DSA:1.25.40.10 388 670 1.9E-24 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_06055 d5c9c29f971e473e916457c2b081e97b 1254 SUPERFAMILY SSF48452 83 548 4.3E-23 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_06055 d5c9c29f971e473e916457c2b081e97b 1254 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 921 1235 4.1E-94 T 12-10-2018 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 M634_06055 d5c9c29f971e473e916457c2b081e97b 1254 Pfam PF14559 Tetratricopeptide repeat 316 382 5.0E-6 T 12-10-2018 M634_06055 d5c9c29f971e473e916457c2b081e97b 1254 Gene3D G3DSA:1.25.40.10 59 220 1.3E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_06055 d5c9c29f971e473e916457c2b081e97b 1254 Pfam PF13414 TPR repeat 395 432 3.6E-7 T 12-10-2018 M634_06055 d5c9c29f971e473e916457c2b081e97b 1254 Pfam PF13432 Tetratricopeptide repeat 101 172 3.1E-4 T 12-10-2018 M634_06055 d5c9c29f971e473e916457c2b081e97b 1254 PRINTS PR01441 Cellulose synthase subunit C signature 244 266 2.0E-10 T 12-10-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 M634_06055 d5c9c29f971e473e916457c2b081e97b 1254 PRINTS PR01441 Cellulose synthase subunit C signature 532 552 2.0E-10 T 12-10-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 M634_06055 d5c9c29f971e473e916457c2b081e97b 1254 PRINTS PR01441 Cellulose synthase subunit C signature 1119 1143 2.0E-10 T 12-10-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 M634_06055 d5c9c29f971e473e916457c2b081e97b 1254 SMART SM00028 95 128 2.6 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_06055 d5c9c29f971e473e916457c2b081e97b 1254 SMART SM00028 388 421 0.077 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_06055 d5c9c29f971e473e916457c2b081e97b 1254 SMART SM00028 422 455 2.0E-5 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_06055 d5c9c29f971e473e916457c2b081e97b 1254 SMART SM00028 340 373 0.0016 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_06055 d5c9c29f971e473e916457c2b081e97b 1254 SMART SM00028 306 339 86.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_06055 d5c9c29f971e473e916457c2b081e97b 1254 Gene3D G3DSA:1.25.40.10 263 387 4.6E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_04145 29c185a1e2108c95e0ea25237b9a901b 603 Gene3D G3DSA:3.40.50.2300 261 596 9.6E-63 T 12-10-2018 M634_04145 29c185a1e2108c95e0ea25237b9a901b 603 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 1 603 29.87 T 12-10-2018 IPR007443 Penicillin-binding protein activator LpoA M634_04145 29c185a1e2108c95e0ea25237b9a901b 603 Gene3D G3DSA:1.25.40.10 23 146 4.0E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_04145 29c185a1e2108c95e0ea25237b9a901b 603 SUPERFAMILY SSF53822 260 599 1.37E-69 T 12-10-2018 IPR028082 Periplasmic binding protein-like I M634_04145 29c185a1e2108c95e0ea25237b9a901b 603 Gene3D G3DSA:1.25.40.650 149 254 5.8E-17 T 12-10-2018 M634_04145 29c185a1e2108c95e0ea25237b9a901b 603 Gene3D G3DSA:3.40.50.2300 369 597 9.6E-63 T 12-10-2018 M634_04145 29c185a1e2108c95e0ea25237b9a901b 603 Pfam PF04348 LppC putative lipoprotein 40 599 5.3E-162 T 12-10-2018 IPR007443 Penicillin-binding protein activator LpoA M634_07905 a8a2e2f27449be30009c21b0dd76db93 598 SUPERFAMILY SSF51971 117 360 1.12E-61 T 12-10-2018 M634_07905 a8a2e2f27449be30009c21b0dd76db93 598 Pfam PF13534 4Fe-4S dicluster domain 489 547 1.2E-4 T 12-10-2018 M634_07905 a8a2e2f27449be30009c21b0dd76db93 598 Gene3D G3DSA:3.50.50.60 225 359 4.5E-38 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_07905 a8a2e2f27449be30009c21b0dd76db93 598 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 120 402 1.2E-26 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 M634_07905 a8a2e2f27449be30009c21b0dd76db93 598 SUPERFAMILY SSF46548 409 552 2.49E-17 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 M634_07905 a8a2e2f27449be30009c21b0dd76db93 598 PRINTS PR00419 Adrenodoxin reductase family signature 185 195 1.6E-22 T 12-10-2018 M634_07905 a8a2e2f27449be30009c21b0dd76db93 598 PRINTS PR00419 Adrenodoxin reductase family signature 143 156 1.6E-22 T 12-10-2018 M634_07905 a8a2e2f27449be30009c21b0dd76db93 598 PRINTS PR00419 Adrenodoxin reductase family signature 252 266 1.6E-22 T 12-10-2018 M634_07905 a8a2e2f27449be30009c21b0dd76db93 598 PRINTS PR00419 Adrenodoxin reductase family signature 120 142 1.6E-22 T 12-10-2018 M634_07905 a8a2e2f27449be30009c21b0dd76db93 598 PRINTS PR00419 Adrenodoxin reductase family signature 286 299 1.6E-22 T 12-10-2018 M634_07905 a8a2e2f27449be30009c21b0dd76db93 598 Gene3D G3DSA:3.50.50.60 116 224 1.6E-17 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_07905 a8a2e2f27449be30009c21b0dd76db93 598 SUPERFAMILY SSF46548 15 129 6.28E-22 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 M634_07905 a8a2e2f27449be30009c21b0dd76db93 598 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 20 106 3.0E-18 T 12-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 M634_07905 a8a2e2f27449be30009c21b0dd76db93 598 Gene3D G3DSA:1.10.1060.10 6 115 5.9E-26 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 M634_07905 a8a2e2f27449be30009c21b0dd76db93 598 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 533 544 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M634_05105 148e22e24d6b2184eab4b19d1e096874 471 Pfam PF00202 Aminotransferase class-III 39 462 6.9E-106 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M634_05105 148e22e24d6b2184eab4b19d1e096874 471 PIRSF PIRSF000521 19 466 3.0E-32 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M634_05105 148e22e24d6b2184eab4b19d1e096874 471 SUPERFAMILY SSF53383 34 465 7.31E-123 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_05105 148e22e24d6b2184eab4b19d1e096874 471 Gene3D G3DSA:3.90.1150.10 43 462 3.0E-151 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M634_05105 148e22e24d6b2184eab4b19d1e096874 471 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 265 302 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M634_05105 148e22e24d6b2184eab4b19d1e096874 471 Gene3D G3DSA:3.40.640.10 76 354 3.0E-151 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_16615 7c5fd5da367059880b1071b7daa187e7 150 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 27 149 8.0E-69 T 12-10-2018 M634_16615 7c5fd5da367059880b1071b7daa187e7 150 SUPERFAMILY SSF49503 23 147 3.08E-46 T 12-10-2018 IPR008972 Cupredoxin M634_16615 7c5fd5da367059880b1071b7daa187e7 150 Gene3D G3DSA:2.60.40.420 23 149 9.1E-46 T 12-10-2018 IPR008972 Cupredoxin M634_16615 7c5fd5da367059880b1071b7daa187e7 150 ProSitePatterns PS00196 Type-1 copper (blue) proteins signature. 127 144 - T 12-10-2018 IPR028871 Blue (type 1) copper protein, binding site M634_16615 7c5fd5da367059880b1071b7daa187e7 150 TIGRFAM TIGR02695 azurin: azurin 25 149 7.6E-63 T 12-10-2018 IPR014068 Azurin M634_16615 7c5fd5da367059880b1071b7daa187e7 150 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 23 147 7.6E-26 T 12-10-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 M634_02705 31f0e1b093b1a4a9c314e5332bf063cf 404 Pfam PF12693 GspL periplasmic domain 245 403 4.1E-55 T 12-10-2018 IPR025691 GspL periplasmic domain M634_02705 31f0e1b093b1a4a9c314e5332bf063cf 404 Pfam PF05134 Type II secretion system (T2SS), protein L 9 241 8.9E-86 T 12-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain M634_02705 31f0e1b093b1a4a9c314e5332bf063cf 404 Gene3D G3DSA:3.30.420.370 146 216 9.2E-87 T 12-10-2018 M634_02705 31f0e1b093b1a4a9c314e5332bf063cf 404 Gene3D G3DSA:3.30.1360.100 318 404 5.7E-32 T 12-10-2018 M634_02705 31f0e1b093b1a4a9c314e5332bf063cf 404 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 9 402 1.1E-93 T 12-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 M634_02705 31f0e1b093b1a4a9c314e5332bf063cf 404 Gene3D G3DSA:3.30.420.380 7 238 9.2E-87 T 12-10-2018 M634_02705 31f0e1b093b1a4a9c314e5332bf063cf 404 PIRSF PIRSF015761 12 404 3.5E-39 T 12-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 M634_02705 31f0e1b093b1a4a9c314e5332bf063cf 404 SUPERFAMILY SSF53067 150 239 5.96E-24 T 12-10-2018 M634_02705 31f0e1b093b1a4a9c314e5332bf063cf 404 SUPERFAMILY SSF53067 6 148 3.43E-42 T 12-10-2018 M634_05510 129d9b233eeb24ea4f3f4bee68d225d1 267 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 12 176 25.303 T 12-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 M634_05510 129d9b233eeb24ea4f3f4bee68d225d1 267 SUPERFAMILY SSF110997 189 262 2.75E-13 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 M634_05510 129d9b233eeb24ea4f3f4bee68d225d1 267 Gene3D G3DSA:2.40.40.10 83 177 6.1E-39 T 12-10-2018 IPR036908 RlpA-like domain superfamily M634_05510 129d9b233eeb24ea4f3f4bee68d225d1 267 Gene3D G3DSA:3.30.70.1070 192 263 5.8E-5 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 M634_05510 129d9b233eeb24ea4f3f4bee68d225d1 267 SUPERFAMILY SSF50685 88 175 2.86E-11 T 12-10-2018 IPR036908 RlpA-like domain superfamily M634_05510 129d9b233eeb24ea4f3f4bee68d225d1 267 Pfam PF03330 Lytic transglycolase 84 173 2.6E-28 T 12-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain M634_05510 129d9b233eeb24ea4f3f4bee68d225d1 267 Pfam PF05036 Sporulation related domain 190 260 4.8E-12 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 M634_05510 129d9b233eeb24ea4f3f4bee68d225d1 267 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 86 250 2.1E-47 T 12-10-2018 IPR012997 Rare lipoprotein A M634_00210 0cdbb4fe0a3745a9c410a4dff7b5e118 570 Gene3D G3DSA:2.60.40.3470 14 128 1.8E-14 T 12-10-2018 M634_00210 0cdbb4fe0a3745a9c410a4dff7b5e118 570 Gene3D G3DSA:3.55.50.30 129 241 2.9E-36 T 12-10-2018 M634_00210 0cdbb4fe0a3745a9c410a4dff7b5e118 570 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 514 547 - T 12-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 M634_00210 0cdbb4fe0a3745a9c410a4dff7b5e118 570 PRINTS PR00811 Bacterial general secretion pathway protein D signature 556 570 7.1E-20 T 12-10-2018 IPR001775 GspD/PilQ family M634_00210 0cdbb4fe0a3745a9c410a4dff7b5e118 570 PRINTS PR00811 Bacterial general secretion pathway protein D signature 309 319 7.1E-20 T 12-10-2018 IPR001775 GspD/PilQ family M634_00210 0cdbb4fe0a3745a9c410a4dff7b5e118 570 PRINTS PR00811 Bacterial general secretion pathway protein D signature 441 451 7.1E-20 T 12-10-2018 IPR001775 GspD/PilQ family M634_00210 0cdbb4fe0a3745a9c410a4dff7b5e118 570 PRINTS PR00811 Bacterial general secretion pathway protein D signature 533 551 7.1E-20 T 12-10-2018 IPR001775 GspD/PilQ family M634_00210 0cdbb4fe0a3745a9c410a4dff7b5e118 570 PRINTS PR00811 Bacterial general secretion pathway protein D signature 406 430 7.1E-20 T 12-10-2018 IPR001775 GspD/PilQ family M634_00210 0cdbb4fe0a3745a9c410a4dff7b5e118 570 Gene3D G3DSA:3.30.1370.120 242 305 1.5E-11 T 12-10-2018 IPR038591 NolW-like superfamily M634_00210 0cdbb4fe0a3745a9c410a4dff7b5e118 570 Pfam PF03958 Bacterial type II/III secretion system short domain 244 309 1.2E-12 T 12-10-2018 IPR005644 NolW-like M634_00210 0cdbb4fe0a3745a9c410a4dff7b5e118 570 Pfam PF00263 Bacterial type II and III secretion system protein 410 568 3.1E-46 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 M634_00210 0cdbb4fe0a3745a9c410a4dff7b5e118 570 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 145 568 2.4E-164 T 12-10-2018 IPR013355 Type IV pilus secretin PilQ M634_00210 0cdbb4fe0a3745a9c410a4dff7b5e118 570 SMART SM00965 170 218 7.6E-9 T 12-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 M634_01565 d4aa5476f19ef83c969845290b09100f 611 SUPERFAMILY SSF52540 17 204 2.21E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_01565 d4aa5476f19ef83c969845290b09100f 611 Gene3D G3DSA:1.10.10.10 409 519 5.7E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_01565 d4aa5476f19ef83c969845290b09100f 611 Gene3D G3DSA:3.40.50.300 213 408 3.3E-60 T 12-10-2018 M634_01565 d4aa5476f19ef83c969845290b09100f 611 SMART SM00490 253 334 9.3E-29 T 12-10-2018 IPR001650 Helicase, C-terminal M634_01565 d4aa5476f19ef83c969845290b09100f 611 Gene3D G3DSA:3.40.50.300 7 211 1.3E-82 T 12-10-2018 M634_01565 d4aa5476f19ef83c969845290b09100f 611 SMART SM00956 414 517 8.9E-51 T 12-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 M634_01565 d4aa5476f19ef83c969845290b09100f 611 Pfam PF00570 HRDC domain 537 603 2.5E-22 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 M634_01565 d4aa5476f19ef83c969845290b09100f 611 Pfam PF16124 RecQ zinc-binding 346 407 5.7E-18 T 12-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain M634_01565 d4aa5476f19ef83c969845290b09100f 611 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 19 466 1.0E-189 T 12-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 M634_01565 d4aa5476f19ef83c969845290b09100f 611 SUPERFAMILY SSF47819 534 609 6.32E-26 T 12-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 M634_01565 d4aa5476f19ef83c969845290b09100f 611 SUPERFAMILY SSF52540 211 459 1.36E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_01565 d4aa5476f19ef83c969845290b09100f 611 Pfam PF00270 DEAD/DEAH box helicase 31 189 6.5E-19 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 M634_01565 d4aa5476f19ef83c969845290b09100f 611 Pfam PF00271 Helicase conserved C-terminal domain 228 333 4.3E-20 T 12-10-2018 IPR001650 Helicase, C-terminal M634_01565 d4aa5476f19ef83c969845290b09100f 611 Pfam PF09382 RQC domain 409 517 1.0E-36 T 12-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 M634_01565 d4aa5476f19ef83c969845290b09100f 611 SMART SM00487 25 221 6.8E-29 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M634_01565 d4aa5476f19ef83c969845290b09100f 611 SMART SM00341 533 611 2.1E-22 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 M634_01565 d4aa5476f19ef83c969845290b09100f 611 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 17 606 1.4E-253 T 12-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 M634_01565 d4aa5476f19ef83c969845290b09100f 611 Gene3D G3DSA:1.10.150.80 526 610 4.2E-28 T 12-10-2018 M634_03820 9f1c5e20b08c5d32fcd4953afab6edb1 650 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 550 566 - T 12-10-2018 IPR002178 PTS EIIA type-2 domain M634_03820 9f1c5e20b08c5d32fcd4953afab6edb1 650 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 9 345 8.1E-170 T 12-10-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197 M634_03820 9f1c5e20b08c5d32fcd4953afab6edb1 650 Pfam PF02378 Phosphotransferase system, EIIC 18 278 6.5E-19 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 M634_03820 9f1c5e20b08c5d32fcd4953afab6edb1 650 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 386 467 5.2E-12 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 M634_03820 9f1c5e20b08c5d32fcd4953afab6edb1 650 SUPERFAMILY SSF55804 506 645 2.22E-40 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 M634_03820 9f1c5e20b08c5d32fcd4953afab6edb1 650 SUPERFAMILY SSF52794 385 472 3.49E-25 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 M634_03820 9f1c5e20b08c5d32fcd4953afab6edb1 650 Gene3D G3DSA:3.40.50.2300 373 476 3.5E-36 T 12-10-2018 M634_03820 9f1c5e20b08c5d32fcd4953afab6edb1 650 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 507 644 1.0E-33 T 12-10-2018 IPR002178 PTS EIIA type-2 domain M634_03820 9f1c5e20b08c5d32fcd4953afab6edb1 650 Gene3D G3DSA:3.40.930.10 502 647 3.9E-51 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 M634_07360 04cf26e5df3d4a036051a2bb673258c4 186 Pfam PF00239 Resolvase, N terminal domain 4 140 2.8E-34 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 M634_07360 04cf26e5df3d4a036051a2bb673258c4 186 SUPERFAMILY SSF53041 1 140 9.55E-37 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 M634_07360 04cf26e5df3d4a036051a2bb673258c4 186 SMART SM00857 3 140 2.3E-39 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 M634_07360 04cf26e5df3d4a036051a2bb673258c4 186 Pfam PF02796 Helix-turn-helix domain of resolvase 142 182 6.5E-6 T 12-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 M634_07360 04cf26e5df3d4a036051a2bb673258c4 186 Gene3D G3DSA:1.10.10.60 142 184 3.2E-6 T 12-10-2018 M634_07360 04cf26e5df3d4a036051a2bb673258c4 186 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 12-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 M634_07360 04cf26e5df3d4a036051a2bb673258c4 186 Gene3D G3DSA:3.40.50.1390 1 123 2.3E-36 T 12-10-2018 M634_03330 c9b332bb286f20030c1364bc18190d37 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 2.0E-54 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 M634_03330 c9b332bb286f20030c1364bc18190d37 123 SMART SM01374 1 123 3.3E-85 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 M634_03330 c9b332bb286f20030c1364bc18190d37 123 Gene3D G3DSA:2.40.150.20 1 123 3.6E-56 T 12-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 M634_03330 c9b332bb286f20030c1364bc18190d37 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 12-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03330 c9b332bb286f20030c1364bc18190d37 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 27.304 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 M634_03330 c9b332bb286f20030c1364bc18190d37 123 SUPERFAMILY SSF50193 2 122 9.03E-51 T 12-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 M634_03330 c9b332bb286f20030c1364bc18190d37 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 2.8E-58 T 12-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 M634_13795 a52efa215b8e67ed09775c5dbe6423cc 190 Pfam PF03358 NADPH-dependent FMN reductase 13 135 3.6E-12 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 M634_13795 a52efa215b8e67ed09775c5dbe6423cc 190 ProSitePatterns PS00201 Flavodoxin signature. 7 23 - T 12-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 M634_13795 a52efa215b8e67ed09775c5dbe6423cc 190 Gene3D G3DSA:3.40.50.360 1 190 8.9E-62 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M634_13795 a52efa215b8e67ed09775c5dbe6423cc 190 SUPERFAMILY SSF52218 4 187 1.31E-55 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M634_18460 9087717721d03c912c4ac1a65d7b9435 446 TIGRFAM TIGR00797 matE: MATE efflux family protein 19 417 1.9E-58 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M634_18460 9087717721d03c912c4ac1a65d7b9435 446 Pfam PF01554 MatE 247 404 2.6E-22 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M634_18460 9087717721d03c912c4ac1a65d7b9435 446 Pfam PF01554 MatE 19 179 8.8E-26 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M634_18460 9087717721d03c912c4ac1a65d7b9435 446 PIRSF PIRSF006603 2 446 8.9E-69 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M634_21185 eb00d5fabebcddc675d8369f6dab1cfb 668 SUPERFAMILY SSF56935 36 668 4.76E-84 T 12-10-2018 M634_21185 eb00d5fabebcddc675d8369f6dab1cfb 668 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 52 668 8.1E-84 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 M634_21185 eb00d5fabebcddc675d8369f6dab1cfb 668 Gene3D G3DSA:2.40.170.20 151 668 6.8E-111 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily M634_21185 eb00d5fabebcddc675d8369f6dab1cfb 668 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 137 3.7E-12 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain M634_21185 eb00d5fabebcddc675d8369f6dab1cfb 668 Pfam PF00593 TonB dependent receptor 236 666 4.3E-39 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel M634_21185 eb00d5fabebcddc675d8369f6dab1cfb 668 Gene3D G3DSA:2.170.130.10 42 149 4.2E-30 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily M634_21185 eb00d5fabebcddc675d8369f6dab1cfb 668 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 651 668 - T 12-10-2018 IPR010917 TonB-dependent receptor, conserved site M634_23505 2467d3d76f2a0bcab98215ddc9d9aab0 668 SUPERFAMILY SSF50249 83 173 6.28E-26 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_23505 2467d3d76f2a0bcab98215ddc9d9aab0 668 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 648 8.4E-181 T 12-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 M634_23505 2467d3d76f2a0bcab98215ddc9d9aab0 668 SUPERFAMILY SSF50249 8 80 1.94E-13 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_23505 2467d3d76f2a0bcab98215ddc9d9aab0 668 SUPERFAMILY SSF50249 186 563 9.94E-108 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_23505 2467d3d76f2a0bcab98215ddc9d9aab0 668 SMART SM00357 23 79 7.4E-8 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 M634_23505 2467d3d76f2a0bcab98215ddc9d9aab0 668 Pfam PF00773 RNB domain 193 521 2.4E-84 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 M634_23505 2467d3d76f2a0bcab98215ddc9d9aab0 668 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 649 0.0 T 12-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 M634_23505 2467d3d76f2a0bcab98215ddc9d9aab0 668 Pfam PF00575 S1 RNA binding domain 565 645 1.8E-8 T 12-10-2018 IPR003029 S1 domain GO:0003676 M634_23505 2467d3d76f2a0bcab98215ddc9d9aab0 668 SMART SM00955 193 523 6.6E-113 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 M634_23505 2467d3d76f2a0bcab98215ddc9d9aab0 668 SUPERFAMILY SSF50249 568 649 1.05E-18 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_23505 2467d3d76f2a0bcab98215ddc9d9aab0 668 Gene3D G3DSA:2.40.50.640 83 157 6.4E-31 T 12-10-2018 M634_23505 2467d3d76f2a0bcab98215ddc9d9aab0 668 Pfam PF08206 Ribonuclease B OB domain 24 80 5.8E-16 T 12-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain M634_23505 2467d3d76f2a0bcab98215ddc9d9aab0 668 ProSitePatterns PS01175 Ribonuclease II family signature. 490 514 - T 12-10-2018 IPR022966 Ribonuclease II/R, conserved site M634_23505 2467d3d76f2a0bcab98215ddc9d9aab0 668 Gene3D G3DSA:2.40.50.140 565 651 1.1E-32 T 12-10-2018 M634_23505 2467d3d76f2a0bcab98215ddc9d9aab0 668 Gene3D G3DSA:2.40.50.140 1 82 3.6E-26 T 12-10-2018 M634_23505 2467d3d76f2a0bcab98215ddc9d9aab0 668 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 650 42.224 T 12-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 M634_10160 9b337f847b233fd9caec490fab3e8313 163 SUPERFAMILY SSF54523 7 146 7.77E-11 T 12-10-2018 M634_10160 9b337f847b233fd9caec490fab3e8313 163 Gene3D G3DSA:3.30.700.10 7 101 2.9E-9 T 12-10-2018 M634_10160 9b337f847b233fd9caec490fab3e8313 163 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 27 3.5E-6 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M634_10160 9b337f847b233fd9caec490fab3e8313 163 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 1.4E-6 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M634_00445 b6e6473ca84dfbbdf3ffd6391e9ed9c5 485 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 1 485 56.524 T 12-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 M634_00445 b6e6473ca84dfbbdf3ffd6391e9ed9c5 485 Pfam PF00171 Aldehyde dehydrogenase family 9 458 7.0E-123 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 M634_00445 b6e6473ca84dfbbdf3ffd6391e9ed9c5 485 Gene3D G3DSA:3.40.605.10 7 448 3.8E-142 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 M634_00445 b6e6473ca84dfbbdf3ffd6391e9ed9c5 485 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 3 484 8.4E-229 T 12-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 M634_00445 b6e6473ca84dfbbdf3ffd6391e9ed9c5 485 SUPERFAMILY SSF53720 2 449 6.81E-125 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 M634_00445 b6e6473ca84dfbbdf3ffd6391e9ed9c5 485 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 M634_00445 b6e6473ca84dfbbdf3ffd6391e9ed9c5 485 Gene3D G3DSA:3.40.309.10 247 436 3.8E-142 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 M634_00445 b6e6473ca84dfbbdf3ffd6391e9ed9c5 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 242 249 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 M634_15725 b5841573946bda5467388aeac63cc06a 379 Gene3D G3DSA:2.60.200.60 54 95 2.1E-11 T 12-10-2018 M634_15725 b5841573946bda5467388aeac63cc06a 379 Gene3D G3DSA:2.60.200.60 1 53 6.6E-11 T 12-10-2018 M634_15725 b5841573946bda5467388aeac63cc06a 379 Pfam PF05488 PAAR motif 21 86 5.4E-24 T 12-10-2018 IPR008727 PAAR motif M634_15725 b5841573946bda5467388aeac63cc06a 379 Pfam PF15604 Novel toxin 15 226 370 8.9E-34 T 12-10-2018 IPR028949 Novel toxin 15 M634_03455 55b3255bc5cbd7397ab87761b449ce96 302 Gene3D G3DSA:3.40.50.620 7 212 5.0E-66 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M634_03455 55b3255bc5cbd7397ab87761b449ce96 302 SUPERFAMILY SSF52402 6 209 2.19E-74 T 12-10-2018 M634_03455 55b3255bc5cbd7397ab87761b449ce96 302 PIRSF PIRSF002936 1 302 4.1E-156 T 12-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 M634_03455 55b3255bc5cbd7397ab87761b449ce96 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 58.245 T 12-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 M634_03455 55b3255bc5cbd7397ab87761b449ce96 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 6.4E-164 T 12-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 M634_03455 55b3255bc5cbd7397ab87761b449ce96 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 3.6E-64 T 12-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 M634_22580 7a735bc3e2ab336b0882ea44f591610d 323 SMART SM00267 144 320 8.2E-50 T 12-10-2018 IPR000160 GGDEF domain M634_22580 7a735bc3e2ab336b0882ea44f591610d 323 Gene3D G3DSA:3.30.70.270 141 322 4.5E-51 T 12-10-2018 M634_22580 7a735bc3e2ab336b0882ea44f591610d 323 SUPERFAMILY SSF52172 10 159 1.71E-36 T 12-10-2018 IPR011006 CheY-like superfamily M634_22580 7a735bc3e2ab336b0882ea44f591610d 323 SUPERFAMILY SSF55073 160 321 2.35E-43 T 12-10-2018 IPR029787 Nucleotide cyclase M634_22580 7a735bc3e2ab336b0882ea44f591610d 323 Pfam PF00990 Diguanylate cyclase, GGDEF domain 155 316 7.0E-42 T 12-10-2018 IPR000160 GGDEF domain M634_22580 7a735bc3e2ab336b0882ea44f591610d 323 Pfam PF00072 Response regulator receiver domain 14 121 2.1E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_22580 7a735bc3e2ab336b0882ea44f591610d 323 SMART SM00448 12 124 1.5E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_22580 7a735bc3e2ab336b0882ea44f591610d 323 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 152 319 2.0E-45 T 12-10-2018 IPR000160 GGDEF domain M634_22580 7a735bc3e2ab336b0882ea44f591610d 323 Gene3D G3DSA:3.40.50.2300 8 140 5.1E-31 T 12-10-2018 M634_08060 d650fdd68d8ee40700934931d2f7c7f3 760 SUPERFAMILY SSF56645 61 296 1.83E-47 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 M634_08060 d650fdd68d8ee40700934931d2f7c7f3 760 Gene3D G3DSA:1.20.140.10 301 446 8.4E-91 T 12-10-2018 M634_08060 d650fdd68d8ee40700934931d2f7c7f3 760 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 178 277 3.2E-9 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 M634_08060 d650fdd68d8ee40700934931d2f7c7f3 760 Gene3D G3DSA:1.10.540.10 63 176 8.4E-91 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 M634_08060 d650fdd68d8ee40700934931d2f7c7f3 760 Pfam PF09317 Domain of unknown function (DUF1974) 455 739 4.0E-114 T 12-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 M634_08060 d650fdd68d8ee40700934931d2f7c7f3 760 Gene3D G3DSA:2.40.110.10 177 300 8.4E-91 T 12-10-2018 M634_08060 d650fdd68d8ee40700934931d2f7c7f3 760 SUPERFAMILY SSF47203 301 453 1.26E-20 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 M634_08060 d650fdd68d8ee40700934931d2f7c7f3 760 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 66 173 1.9E-15 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 M634_08060 d650fdd68d8ee40700934931d2f7c7f3 760 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 301 447 4.8E-8 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 M634_11890 9f068ed3d28e1ee96d47cad288a0dec4 92 SUPERFAMILY SSF54292 3 81 3.67E-18 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 M634_11890 9f068ed3d28e1ee96d47cad288a0dec4 92 Gene3D G3DSA:3.10.20.30 2 89 8.6E-16 T 12-10-2018 IPR012675 Beta-grasp domain superfamily M634_11890 9f068ed3d28e1ee96d47cad288a0dec4 92 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 35 43 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 M634_11890 9f068ed3d28e1ee96d47cad288a0dec4 92 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 74 1.9E-9 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 M634_17370 047edc2eadd852daf1e4f657334e60ea 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 5.2E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_17370 047edc2eadd852daf1e4f657334e60ea 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.1E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_17370 047edc2eadd852daf1e4f657334e60ea 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.1E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_17370 047edc2eadd852daf1e4f657334e60ea 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.1E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_17370 047edc2eadd852daf1e4f657334e60ea 307 Gene3D G3DSA:1.10.10.10 2 89 9.3E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_17370 047edc2eadd852daf1e4f657334e60ea 307 Gene3D G3DSA:3.40.190.290 91 294 5.4E-57 T 12-10-2018 M634_17370 047edc2eadd852daf1e4f657334e60ea 307 Pfam PF03466 LysR substrate binding domain 88 294 6.0E-39 T 12-10-2018 IPR005119 LysR, substrate-binding M634_17370 047edc2eadd852daf1e4f657334e60ea 307 SUPERFAMILY SSF46785 4 112 6.61E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_17370 047edc2eadd852daf1e4f657334e60ea 307 SUPERFAMILY SSF53850 89 296 1.99E-40 T 12-10-2018 M634_05455 fcdce20fb519505667b4454bbcbf9142 183 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 4 178 1.7E-79 T 12-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 M634_05455 fcdce20fb519505667b4454bbcbf9142 183 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 5 154 2.3E-35 T 12-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 M634_05455 fcdce20fb519505667b4454bbcbf9142 183 SUPERFAMILY SSF56784 4 182 2.13E-48 T 12-10-2018 IPR036412 HAD-like superfamily M634_05455 fcdce20fb519505667b4454bbcbf9142 183 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 152 1.2E-38 T 12-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 M634_05455 fcdce20fb519505667b4454bbcbf9142 183 Gene3D G3DSA:3.40.50.1000 2 183 6.7E-61 T 12-10-2018 IPR023214 HAD superfamily M634_05455 fcdce20fb519505667b4454bbcbf9142 183 Pfam PF13242 HAD-hyrolase-like 107 176 6.9E-13 T 12-10-2018 M634_05455 fcdce20fb519505667b4454bbcbf9142 183 PIRSF PIRSF004682 1 183 3.6E-63 T 12-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 M634_08710 98a2038dbbd1cf8d88d3d8207f720445 70 PRINTS PR00050 Cold shock protein signature 43 61 3.8E-16 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 M634_08710 98a2038dbbd1cf8d88d3d8207f720445 70 PRINTS PR00050 Cold shock protein signature 28 37 3.8E-16 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 M634_08710 98a2038dbbd1cf8d88d3d8207f720445 70 PRINTS PR00050 Cold shock protein signature 7 22 3.8E-16 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 M634_08710 98a2038dbbd1cf8d88d3d8207f720445 70 SUPERFAMILY SSF50249 4 69 1.09E-23 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_08710 98a2038dbbd1cf8d88d3d8207f720445 70 PIRSF PIRSF002599 1 70 1.5E-23 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 M634_08710 98a2038dbbd1cf8d88d3d8207f720445 70 SMART SM00357 6 70 1.3E-25 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 M634_08710 98a2038dbbd1cf8d88d3d8207f720445 70 Gene3D G3DSA:2.40.50.140 2 69 5.6E-27 T 12-10-2018 M634_08710 98a2038dbbd1cf8d88d3d8207f720445 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 69 5.3E-27 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 M634_20725 05cdc05f57457f6e6526921b04944e89 321 Pfam PF03595 Voltage-dependent anion channel 12 304 3.8E-25 T 12-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 M634_20725 05cdc05f57457f6e6526921b04944e89 321 Gene3D G3DSA:1.50.10.150 6 309 5.1E-33 T 12-10-2018 IPR038665 Voltage-dependent anion channel superfamily M634_23695 53c409d0d2817fa8e5ecf2af3aa4f651 300 SUPERFAMILY SSF103481 196 290 7.98E-8 T 12-10-2018 M634_23695 53c409d0d2817fa8e5ecf2af3aa4f651 300 Pfam PF00892 EamA-like transporter family 160 287 1.1E-11 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M634_23695 53c409d0d2817fa8e5ecf2af3aa4f651 300 SUPERFAMILY SSF103481 51 141 4.05E-6 T 12-10-2018 M634_00840 16545c37a62127c2a2fe38851fe6eb7b 613 Pfam PF13899 Thioredoxin-like 503 584 1.4E-13 T 12-10-2018 M634_00840 16545c37a62127c2a2fe38851fe6eb7b 613 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 613 38.554 T 12-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 M634_00840 16545c37a62127c2a2fe38851fe6eb7b 613 Pfam PF11412 Disulphide bond corrector protein DsbC 41 151 7.4E-29 T 12-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain M634_00840 16545c37a62127c2a2fe38851fe6eb7b 613 SUPERFAMILY SSF52833 508 611 7.94E-23 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M634_00840 16545c37a62127c2a2fe38851fe6eb7b 613 SUPERFAMILY SSF74863 39 153 3.4E-40 T 12-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily M634_00840 16545c37a62127c2a2fe38851fe6eb7b 613 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 222 422 5.1E-18 T 12-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 M634_00840 16545c37a62127c2a2fe38851fe6eb7b 613 Gene3D G3DSA:2.60.40.1250 35 168 9.2E-40 T 12-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily M634_00840 16545c37a62127c2a2fe38851fe6eb7b 613 ProSitePatterns PS00194 Thioredoxin family active site. 522 540 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 M634_00840 16545c37a62127c2a2fe38851fe6eb7b 613 Gene3D G3DSA:3.40.30.10 487 613 1.2E-34 T 12-10-2018 M634_20985 92950a42012d411962399dd1ee078021 581 Gene3D G3DSA:3.50.50.60 4 545 2.1E-173 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_20985 92950a42012d411962399dd1ee078021 581 Gene3D G3DSA:3.30.410.40 151 486 2.1E-173 T 12-10-2018 M634_20985 92950a42012d411962399dd1ee078021 581 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 82 105 - T 12-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 M634_20985 92950a42012d411962399dd1ee078021 581 Gene3D G3DSA:4.10.450.10 38 198 2.1E-173 T 12-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 M634_20985 92950a42012d411962399dd1ee078021 581 Pfam PF00732 GMC oxidoreductase 5 312 2.8E-86 T 12-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 M634_20985 92950a42012d411962399dd1ee078021 581 SUPERFAMILY SSF54373 307 489 7.75E-61 T 12-10-2018 M634_20985 92950a42012d411962399dd1ee078021 581 SUPERFAMILY SSF51905 1 549 1.22E-82 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_20985 92950a42012d411962399dd1ee078021 581 TIGRFAM TIGR01810 betA: choline dehydrogenase 6 548 4.0E-231 T 12-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 M634_20985 92950a42012d411962399dd1ee078021 581 PIRSF PIRSF000137 1 556 2.7E-146 T 12-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 M634_20985 92950a42012d411962399dd1ee078021 581 Pfam PF05199 GMC oxidoreductase 403 541 1.5E-40 T 12-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 M634_20985 92950a42012d411962399dd1ee078021 581 Gene3D G3DSA:1.10.1220.110 97 150 2.1E-173 T 12-10-2018 M634_20985 92950a42012d411962399dd1ee078021 581 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 3 568 59.726 T 12-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 M634_01985 ba6513afab8418af68404f76c16630e6 548 Gene3D G3DSA:3.40.50.970 1 179 2.4E-66 T 12-10-2018 M634_01985 ba6513afab8418af68404f76c16630e6 548 Gene3D G3DSA:3.40.50.1220 180 350 9.5E-53 T 12-10-2018 M634_01985 ba6513afab8418af68404f76c16630e6 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 167 3.5E-55 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 M634_01985 ba6513afab8418af68404f76c16630e6 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 546 4.8E-210 T 12-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 M634_01985 ba6513afab8418af68404f76c16630e6 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 375 523 2.8E-48 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 M634_01985 ba6513afab8418af68404f76c16630e6 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 412 431 - T 12-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 M634_01985 ba6513afab8418af68404f76c16630e6 548 Gene3D G3DSA:3.40.50.970 351 548 4.3E-66 T 12-10-2018 M634_01985 ba6513afab8418af68404f76c16630e6 548 SUPERFAMILY SSF52467 182 341 1.11E-55 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily M634_01985 ba6513afab8418af68404f76c16630e6 548 SUPERFAMILY SSF52518 1 175 1.89E-61 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold M634_01985 ba6513afab8418af68404f76c16630e6 548 SUPERFAMILY SSF52518 358 545 1.23E-65 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold M634_01985 ba6513afab8418af68404f76c16630e6 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 187 322 2.3E-40 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 M634_00400 79d048652df7c87d11e126fab671d2a3 598 SUPERFAMILY SSF51735 401 528 7.8E-30 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_00400 79d048652df7c87d11e126fab671d2a3 598 Gene3D G3DSA:3.40.50.720 398 559 2.2E-35 T 12-10-2018 M634_00400 79d048652df7c87d11e126fab671d2a3 598 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 16 283 1.8E-81 T 12-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 M634_00400 79d048652df7c87d11e126fab671d2a3 598 Pfam PF02254 TrkA-N domain 402 512 2.7E-22 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 M634_00400 79d048652df7c87d11e126fab671d2a3 598 Gene3D G3DSA:1.20.1530.20 4 384 3.0E-81 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily M634_00400 79d048652df7c87d11e126fab671d2a3 598 Pfam PF00999 Sodium/hydrogen exchanger family 13 372 9.3E-67 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 M634_00400 79d048652df7c87d11e126fab671d2a3 598 PRINTS PR00335 TrkA potassium uptake protein signature 401 415 5.2E-7 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 M634_00400 79d048652df7c87d11e126fab671d2a3 598 PRINTS PR00335 TrkA potassium uptake protein signature 418 432 5.2E-7 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 M634_00400 79d048652df7c87d11e126fab671d2a3 598 PRINTS PR00335 TrkA potassium uptake protein signature 458 468 5.2E-7 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 M634_00400 79d048652df7c87d11e126fab671d2a3 598 PRINTS PR00335 TrkA potassium uptake protein signature 447 457 5.2E-7 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 M634_00400 79d048652df7c87d11e126fab671d2a3 598 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 3 598 47.596 T 12-10-2018 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 M634_17950 ffdae72a36794c509a99647f0f129b39 395 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 389 4.8E-156 T 12-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 M634_17950 ffdae72a36794c509a99647f0f129b39 395 PIRSF PIRSF016049 1 394 2.4E-176 T 12-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 M634_17950 ffdae72a36794c509a99647f0f129b39 395 SUPERFAMILY SSF51658 1 384 3.04E-79 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily M634_17950 ffdae72a36794c509a99647f0f129b39 395 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 395 222.811 T 12-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 M634_17950 ffdae72a36794c509a99647f0f129b39 395 Gene3D G3DSA:3.20.20.150 1 392 1.0E-146 T 12-10-2018 M634_17950 ffdae72a36794c509a99647f0f129b39 395 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 394 1.5E-212 T 12-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 M634_21235 640b48175c29d92dc84d7e4e6b4fbad9 988 SMART SM00388 469 534 6.9E-23 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_21235 640b48175c29d92dc84d7e4e6b4fbad9 988 Gene3D G3DSA:1.20.120.160 871 987 4.4E-20 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 M634_21235 640b48175c29d92dc84d7e4e6b4fbad9 988 SUPERFAMILY SSF47384 456 535 2.75E-20 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M634_21235 640b48175c29d92dc84d7e4e6b4fbad9 988 SUPERFAMILY SSF47226 876 985 5.1E-20 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 M634_21235 640b48175c29d92dc84d7e4e6b4fbad9 988 SMART SM00387 581 694 1.3E-38 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_21235 640b48175c29d92dc84d7e4e6b4fbad9 988 PRINTS PR00344 Bacterial sensor protein C-terminal signature 678 691 1.2E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_21235 640b48175c29d92dc84d7e4e6b4fbad9 988 PRINTS PR00344 Bacterial sensor protein C-terminal signature 638 648 1.2E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_21235 640b48175c29d92dc84d7e4e6b4fbad9 988 PRINTS PR00344 Bacterial sensor protein C-terminal signature 654 672 1.2E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_21235 640b48175c29d92dc84d7e4e6b4fbad9 988 PRINTS PR00344 Bacterial sensor protein C-terminal signature 620 634 1.2E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_21235 640b48175c29d92dc84d7e4e6b4fbad9 988 Gene3D G3DSA:3.30.565.10 533 697 4.1E-51 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_21235 640b48175c29d92dc84d7e4e6b4fbad9 988 SMART SM00073 889 987 0.0072 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 M634_21235 640b48175c29d92dc84d7e4e6b4fbad9 988 Gene3D G3DSA:3.40.50.2300 707 845 1.9E-33 T 12-10-2018 M634_21235 640b48175c29d92dc84d7e4e6b4fbad9 988 Pfam PF00512 His Kinase A (phospho-acceptor) domain 469 534 3.4E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_21235 640b48175c29d92dc84d7e4e6b4fbad9 988 Gene3D G3DSA:1.10.287.130 402 532 1.4E-25 T 12-10-2018 M634_21235 640b48175c29d92dc84d7e4e6b4fbad9 988 TIGRFAM TIGR02956 TMAO_torS: TMAO reductase sytem sensor TorS 7 984 0.0 T 12-10-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 M634_21235 640b48175c29d92dc84d7e4e6b4fbad9 988 SUPERFAMILY SSF55874 523 696 1.7E-45 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_21235 640b48175c29d92dc84d7e4e6b4fbad9 988 Pfam PF00072 Response regulator receiver domain 714 832 7.1E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_21235 640b48175c29d92dc84d7e4e6b4fbad9 988 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 581 693 3.2E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_21235 640b48175c29d92dc84d7e4e6b4fbad9 988 SMART SM00448 712 832 1.1E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_21235 640b48175c29d92dc84d7e4e6b4fbad9 988 PIRSF PIRSF036437 1 988 0.0 T 12-10-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 M634_21235 640b48175c29d92dc84d7e4e6b4fbad9 988 Gene3D G3DSA:1.20.58.920 47 181 2.4E-48 T 12-10-2018 IPR038188 TorS, sensor domain superfamily M634_21235 640b48175c29d92dc84d7e4e6b4fbad9 988 Gene3D G3DSA:1.20.58.920 182 322 5.1E-53 T 12-10-2018 IPR038188 TorS, sensor domain superfamily M634_21235 640b48175c29d92dc84d7e4e6b4fbad9 988 SUPERFAMILY SSF52172 712 872 1.99E-33 T 12-10-2018 IPR011006 CheY-like superfamily M634_21235 640b48175c29d92dc84d7e4e6b4fbad9 988 Pfam PF01627 Hpt domain 901 977 1.2E-12 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 M634_07285 2a89549d98e2ebbd68d73053a54936bb 353 SUPERFAMILY SSF74653 261 352 5.3E-15 T 12-10-2018 M634_07285 2a89549d98e2ebbd68d73053a54936bb 353 Gene3D G3DSA:3.30.1150.10 251 350 1.3E-21 T 12-10-2018 M634_07285 2a89549d98e2ebbd68d73053a54936bb 353 Pfam PF06519 TolA C-terminal 251 349 7.7E-35 T 12-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 M634_07285 2a89549d98e2ebbd68d73053a54936bb 353 TIGRFAM TIGR02794 tolA_full: protein TolA 13 350 5.0E-91 T 12-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 M634_17350 67fdd3f5dcd1e52754ffed862a4ebfce 162 Pfam PF06271 RDD family 6 140 1.4E-17 T 12-10-2018 IPR010432 RDD M634_01540 0816a04e2fe117c94c7c89d29cd801f4 108 PIRSF PIRSF000077 2 108 1.0E-42 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 M634_01540 0816a04e2fe117c94c7c89d29cd801f4 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 M634_01540 0816a04e2fe117c94c7c89d29cd801f4 108 Gene3D G3DSA:3.40.30.10 1 108 3.2E-35 T 12-10-2018 M634_01540 0816a04e2fe117c94c7c89d29cd801f4 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 2.5E-37 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 M634_01540 0816a04e2fe117c94c7c89d29cd801f4 108 PRINTS PR00421 Thioredoxin family signature 24 32 3.3E-10 T 12-10-2018 M634_01540 0816a04e2fe117c94c7c89d29cd801f4 108 PRINTS PR00421 Thioredoxin family signature 72 83 3.3E-10 T 12-10-2018 M634_01540 0816a04e2fe117c94c7c89d29cd801f4 108 PRINTS PR00421 Thioredoxin family signature 32 41 3.3E-10 T 12-10-2018 M634_01540 0816a04e2fe117c94c7c89d29cd801f4 108 SUPERFAMILY SSF52833 3 107 1.66E-38 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M634_01540 0816a04e2fe117c94c7c89d29cd801f4 108 Pfam PF00085 Thioredoxin 5 106 7.7E-33 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 M634_03220 fca5c6d7a57641e72dbf5cb42d0fc2ee 335 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 329 5.3E-166 T 12-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 M634_03220 fca5c6d7a57641e72dbf5cb42d0fc2ee 335 SUPERFAMILY SSF56655 1 324 3.17E-106 T 12-10-2018 M634_03220 fca5c6d7a57641e72dbf5cb42d0fc2ee 335 Gene3D G3DSA:3.40.190.90 109 276 3.1E-124 T 12-10-2018 M634_03220 fca5c6d7a57641e72dbf5cb42d0fc2ee 335 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 321 6.5E-128 T 12-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 M634_03220 fca5c6d7a57641e72dbf5cb42d0fc2ee 335 Gene3D G3DSA:3.30.540.10 7 319 3.1E-124 T 12-10-2018 M634_03220 fca5c6d7a57641e72dbf5cb42d0fc2ee 335 PIRSF PIRSF004532 1 331 3.1E-134 T 12-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 M634_16465 1b29b1ee489768679f50b8acb4c6f5b7 296 Gene3D G3DSA:1.10.3720.10 1 283 3.2E-74 T 12-10-2018 IPR035906 MetI-like superfamily M634_16465 1b29b1ee489768679f50b8acb4c6f5b7 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 285 8.7E-19 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_16465 1b29b1ee489768679f50b8acb4c6f5b7 296 SUPERFAMILY SSF161098 10 296 1.31E-69 T 12-10-2018 IPR035906 MetI-like superfamily M634_08760 9a27fa419c91000aa786791a2e080313 568 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 21 139 1.2E-12 T 12-10-2018 IPR000014 PAS domain M634_08760 9a27fa419c91000aa786791a2e080313 568 Gene3D G3DSA:3.30.450.20 35 138 2.6E-18 T 12-10-2018 M634_08760 9a27fa419c91000aa786791a2e080313 568 Pfam PF00563 EAL domain 322 555 1.2E-64 T 12-10-2018 IPR001633 EAL domain M634_08760 9a27fa419c91000aa786791a2e080313 568 SUPERFAMILY SSF55073 153 306 6.28E-19 T 12-10-2018 IPR029787 Nucleotide cyclase M634_08760 9a27fa419c91000aa786791a2e080313 568 SMART SM00267 135 304 1.5E-7 T 12-10-2018 IPR000160 GGDEF domain M634_08760 9a27fa419c91000aa786791a2e080313 568 SUPERFAMILY SSF55785 27 137 2.44E-18 T 12-10-2018 IPR035965 PAS domain superfamily M634_08760 9a27fa419c91000aa786791a2e080313 568 SMART SM00052 314 560 1.8E-68 T 12-10-2018 IPR001633 EAL domain M634_08760 9a27fa419c91000aa786791a2e080313 568 SMART SM00091 22 88 0.001 T 12-10-2018 IPR000014 PAS domain M634_08760 9a27fa419c91000aa786791a2e080313 568 Pfam PF08447 PAS fold 45 115 2.3E-13 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 M634_08760 9a27fa419c91000aa786791a2e080313 568 Gene3D G3DSA:3.30.70.270 145 309 1.1E-20 T 12-10-2018 M634_08760 9a27fa419c91000aa786791a2e080313 568 SMART SM00086 95 135 4.9E-4 T 12-10-2018 IPR001610 PAC motif M634_08760 9a27fa419c91000aa786791a2e080313 568 Gene3D G3DSA:3.20.20.450 314 566 8.4E-80 T 12-10-2018 IPR035919 EAL domain superfamily M634_08760 9a27fa419c91000aa786791a2e080313 568 SUPERFAMILY SSF141868 319 562 6.41E-74 T 12-10-2018 IPR035919 EAL domain superfamily M634_08760 9a27fa419c91000aa786791a2e080313 568 Pfam PF00990 Diguanylate cyclase, GGDEF domain 146 299 3.2E-13 T 12-10-2018 IPR000160 GGDEF domain M634_02055 99b6eb94aa1155656b016f26013df254 458 SUPERFAMILY SSF51735 232 376 1.79E-33 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_02055 99b6eb94aa1155656b016f26013df254 458 Gene3D G3DSA:3.40.50.720 233 366 2.0E-38 T 12-10-2018 M634_02055 99b6eb94aa1155656b016f26013df254 458 Gene3D G3DSA:3.40.50.720 2 139 1.1E-51 T 12-10-2018 M634_02055 99b6eb94aa1155656b016f26013df254 458 Pfam PF02254 TrkA-N domain 3 123 2.7E-29 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 M634_02055 99b6eb94aa1155656b016f26013df254 458 Pfam PF02254 TrkA-N domain 235 350 4.1E-25 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 M634_02055 99b6eb94aa1155656b016f26013df254 458 SUPERFAMILY SSF116726 136 223 2.62E-9 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 M634_02055 99b6eb94aa1155656b016f26013df254 458 Gene3D G3DSA:3.30.70.1450 140 232 1.5E-21 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 M634_02055 99b6eb94aa1155656b016f26013df254 458 SUPERFAMILY SSF51735 1 151 3.04E-36 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_02055 99b6eb94aa1155656b016f26013df254 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 4.9E-34 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 M634_02055 99b6eb94aa1155656b016f26013df254 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 4.9E-34 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 M634_02055 99b6eb94aa1155656b016f26013df254 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 4.9E-34 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 M634_02055 99b6eb94aa1155656b016f26013df254 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 4.9E-34 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 M634_02055 99b6eb94aa1155656b016f26013df254 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 4.9E-34 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 M634_02055 99b6eb94aa1155656b016f26013df254 458 Pfam PF02080 TrkA-C domain 156 225 4.2E-11 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 M634_02055 99b6eb94aa1155656b016f26013df254 458 Pfam PF02080 TrkA-C domain 391 449 6.0E-9 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 M634_02055 99b6eb94aa1155656b016f26013df254 458 Gene3D G3DSA:3.30.70.1450 367 458 2.9E-28 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 M634_02055 99b6eb94aa1155656b016f26013df254 458 SUPERFAMILY SSF116726 366 437 5.75E-7 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 M634_01095 97cda421c0e4a09f168303e1508af077 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 9.7E-47 T 12-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_01095 97cda421c0e4a09f168303e1508af077 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 122 9.1E-30 T 12-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_01095 97cda421c0e4a09f168303e1508af077 122 Gene3D G3DSA:3.30.1390.10 52 122 8.8E-31 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like M634_01095 97cda421c0e4a09f168303e1508af077 122 SUPERFAMILY SSF54736 51 122 1.46E-24 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like M634_01095 97cda421c0e4a09f168303e1508af077 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 122 24.522 T 12-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_01095 97cda421c0e4a09f168303e1508af077 122 SUPERFAMILY SSF48300 4 58 8.76E-16 T 12-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_01095 97cda421c0e4a09f168303e1508af077 122 Gene3D G3DSA:1.20.5.710 2 51 4.2E-23 T 12-10-2018 M634_01095 97cda421c0e4a09f168303e1508af077 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 49 3.0E-16 T 12-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_01095 97cda421c0e4a09f168303e1508af077 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 57 122 1.0E-28 T 12-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_09375 4df935779c69a7777ec99474ad9074a0 160 SUPERFAMILY SSF89963 2 86 7.59E-31 T 12-10-2018 IPR036183 YajQ-like superfamily M634_09375 4df935779c69a7777ec99474ad9074a0 160 Gene3D G3DSA:3.30.70.990 9 94 4.1E-27 T 12-10-2018 IPR035570 UPF0234, N-terminal M634_09375 4df935779c69a7777ec99474ad9074a0 160 Pfam PF04461 Protein of unknown function (DUF520) 2 159 1.0E-64 T 12-10-2018 IPR007551 Protein of unknown function DUF520 M634_09375 4df935779c69a7777ec99474ad9074a0 160 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 160 29.761 T 12-10-2018 IPR007551 Protein of unknown function DUF520 M634_09375 4df935779c69a7777ec99474ad9074a0 160 SUPERFAMILY SSF89963 88 160 7.32E-29 T 12-10-2018 IPR036183 YajQ-like superfamily M634_09375 4df935779c69a7777ec99474ad9074a0 160 Gene3D G3DSA:3.30.70.860 95 160 1.6E-30 T 12-10-2018 IPR035571 UPF0234-like, C-terminal M634_04380 458cbbcf1da0b2a8a8226484e9d606da 295 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 11 287 1.2E-107 T 12-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 M634_04380 458cbbcf1da0b2a8a8226484e9d606da 295 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 78 86 - T 12-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 M634_04380 458cbbcf1da0b2a8a8226484e9d606da 295 SUPERFAMILY SSF51658 12 286 3.54E-99 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily M634_04380 458cbbcf1da0b2a8a8226484e9d606da 295 SMART SM00518 12 288 3.6E-122 T 12-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 M634_04380 458cbbcf1da0b2a8a8226484e9d606da 295 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 184 191 - T 12-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 M634_04380 458cbbcf1da0b2a8a8226484e9d606da 295 Pfam PF01261 Xylose isomerase-like TIM barrel 29 248 9.3E-42 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain M634_04380 458cbbcf1da0b2a8a8226484e9d606da 295 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 224 240 - T 12-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 M634_04380 458cbbcf1da0b2a8a8226484e9d606da 295 Hamap MF_00152 Probable endonuclease 4 [nfo]. 11 288 42.281 T 12-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 M634_04380 458cbbcf1da0b2a8a8226484e9d606da 295 Gene3D G3DSA:3.20.20.150 10 292 1.1E-111 T 12-10-2018 M634_04985 e2b0319a5648b81f983a42628fafd943 653 SUPERFAMILY SSF48452 315 634 1.14E-28 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_04985 e2b0319a5648b81f983a42628fafd943 653 Pfam PF14280 Domain of unknown function (DUF4365) 17 153 9.8E-20 T 12-10-2018 IPR025375 Domain of unknown function DUF4365 M634_04985 e2b0319a5648b81f983a42628fafd943 653 Pfam PF13414 TPR repeat 574 615 1.3E-9 T 12-10-2018 M634_04985 e2b0319a5648b81f983a42628fafd943 653 SMART SM00028 601 634 51.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_04985 e2b0319a5648b81f983a42628fafd943 653 SMART SM00028 346 379 0.032 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_04985 e2b0319a5648b81f983a42628fafd943 653 SMART SM00028 272 304 29.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_04985 e2b0319a5648b81f983a42628fafd943 653 SMART SM00028 312 345 0.012 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_04985 e2b0319a5648b81f983a42628fafd943 653 SMART SM00028 501 534 55.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_04985 e2b0319a5648b81f983a42628fafd943 653 SMART SM00028 567 600 6.4E-8 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_04985 e2b0319a5648b81f983a42628fafd943 653 Gene3D G3DSA:1.25.40.10 481 644 5.7E-22 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_04985 e2b0319a5648b81f983a42628fafd943 653 Gene3D G3DSA:1.25.40.10 146 480 9.4E-22 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_04985 e2b0319a5648b81f983a42628fafd943 653 Pfam PF13432 Tetratricopeptide repeat 317 377 2.8E-8 T 12-10-2018 M634_08850 c6ba28e3f7ea69ae0dca3104df1733ad 395 Gene3D G3DSA:3.10.580.10 296 394 4.0E-10 T 12-10-2018 M634_08850 c6ba28e3f7ea69ae0dca3104df1733ad 395 Pfam PF00571 CBS domain 348 393 3.3E-4 T 12-10-2018 IPR000644 CBS domain M634_08850 c6ba28e3f7ea69ae0dca3104df1733ad 395 SUPERFAMILY SSF54631 274 392 1.09E-14 T 12-10-2018 M634_08850 c6ba28e3f7ea69ae0dca3104df1733ad 395 SUPERFAMILY SSF52540 43 271 1.45E-75 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_08850 c6ba28e3f7ea69ae0dca3104df1733ad 395 Gene3D G3DSA:3.40.50.300 34 295 6.2E-81 T 12-10-2018 M634_08850 c6ba28e3f7ea69ae0dca3104df1733ad 395 Pfam PF00005 ABC transporter 45 192 5.7E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_08850 c6ba28e3f7ea69ae0dca3104df1733ad 395 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_08850 c6ba28e3f7ea69ae0dca3104df1733ad 395 SMART SM00382 53 242 7.5E-19 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_08850 c6ba28e3f7ea69ae0dca3104df1733ad 395 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 36 393 6.9E-151 T 12-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 M634_16865 7cb3b7f63fe804dc554dec77dc2464ba 376 Gene3D G3DSA:1.10.287.470 122 190 4.2E-10 T 12-10-2018 M634_16865 7cb3b7f63fe804dc554dec77dc2464ba 376 Gene3D G3DSA:1.10.287.470 97 115 9.4E-8 T 12-10-2018 M634_16865 7cb3b7f63fe804dc554dec77dc2464ba 376 SUPERFAMILY SSF111369 63 114 4.71E-6 T 12-10-2018 M634_16865 7cb3b7f63fe804dc554dec77dc2464ba 376 Gene3D G3DSA:2.40.50.100 63 96 9.4E-8 T 12-10-2018 M634_16865 7cb3b7f63fe804dc554dec77dc2464ba 376 Gene3D G3DSA:2.40.50.100 220 256 1.5E-13 T 12-10-2018 M634_16865 7cb3b7f63fe804dc554dec77dc2464ba 376 Gene3D G3DSA:2.40.30.170 257 329 1.5E-13 T 12-10-2018 M634_16865 7cb3b7f63fe804dc554dec77dc2464ba 376 Gene3D G3DSA:1.10.287.470 198 219 1.5E-13 T 12-10-2018 M634_16865 7cb3b7f63fe804dc554dec77dc2464ba 376 Pfam PF13533 Biotin-lipoyl like 63 111 2.7E-10 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain M634_11695 0b8c3f6a388958cc40d668d3593eb6f5 463 Gene3D G3DSA:1.10.10.10 1 68 3.8E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_11695 0b8c3f6a388958cc40d668d3593eb6f5 463 SMART SM00345 7 66 5.3E-12 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_11695 0b8c3f6a388958cc40d668d3593eb6f5 463 SUPERFAMILY SSF46785 1 68 9.4E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_11695 0b8c3f6a388958cc40d668d3593eb6f5 463 Gene3D G3DSA:3.90.1150.10 95 461 4.1E-102 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M634_11695 0b8c3f6a388958cc40d668d3593eb6f5 463 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 2.8E-11 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_11695 0b8c3f6a388958cc40d668d3593eb6f5 463 Pfam PF00155 Aminotransferase class I and II 143 458 9.1E-39 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 M634_11695 0b8c3f6a388958cc40d668d3593eb6f5 463 SUPERFAMILY SSF53383 91 462 9.14E-98 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_11695 0b8c3f6a388958cc40d668d3593eb6f5 463 Gene3D G3DSA:3.40.640.10 138 357 4.1E-102 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_21760 20c3e37fc84b1a97186350224612372e 524 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 317 368 1.7E-9 T 12-10-2018 IPR039506 SpoOB, alpha-helical domain M634_21760 20c3e37fc84b1a97186350224612372e 524 SUPERFAMILY SSF55874 381 520 7.08E-18 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_21760 20c3e37fc84b1a97186350224612372e 524 Gene3D G3DSA:3.30.450.20 32 164 1.1E-33 T 12-10-2018 M634_21760 20c3e37fc84b1a97186350224612372e 524 SUPERFAMILY SSF103190 38 166 6.28E-30 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily M634_21760 20c3e37fc84b1a97186350224612372e 524 Pfam PF14501 GHKL domain 417 518 1.7E-11 T 12-10-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain M634_21760 20c3e37fc84b1a97186350224612372e 524 Pfam PF17203 Single cache domain 3 41 163 2.9E-19 T 12-10-2018 IPR033463 Single cache domain 3 M634_21760 20c3e37fc84b1a97186350224612372e 524 Gene3D G3DSA:3.30.450.20 200 309 5.3E-10 T 12-10-2018 M634_21760 20c3e37fc84b1a97186350224612372e 524 SMART SM00387 415 523 6.2E-14 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_21760 20c3e37fc84b1a97186350224612372e 524 Gene3D G3DSA:3.30.565.10 368 520 4.1E-25 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_17410 d56f96d05e255558b736a5556ff3595e 326 Gene3D G3DSA:3.30.70.100 1 96 5.6E-33 T 12-10-2018 M634_17410 d56f96d05e255558b736a5556ff3595e 326 Gene3D G3DSA:3.40.250.10 97 253 8.1E-52 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M634_17410 d56f96d05e255558b736a5556ff3595e 326 SUPERFAMILY SSF52821 94 240 3.98E-32 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M634_17410 d56f96d05e255558b736a5556ff3595e 326 Hamap MF_00469 UPF0176 protein YceA [yceA]. 2 254 45.368 T 12-10-2018 IPR020936 Uncharacterised protein family UPF0176 M634_17410 d56f96d05e255558b736a5556ff3595e 326 SMART SM00450 113 214 2.8E-22 T 12-10-2018 IPR001763 Rhodanese-like domain M634_17410 d56f96d05e255558b736a5556ff3595e 326 Pfam PF00581 Rhodanese-like domain 117 210 1.9E-8 T 12-10-2018 IPR001763 Rhodanese-like domain M634_02540 a7f99f3749c2f6ac980768dec828bae4 219 Pfam PF01926 50S ribosome-binding GTPase 29 147 1.9E-20 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M634_02540 a7f99f3749c2f6ac980768dec828bae4 219 Gene3D G3DSA:3.40.50.300 3 201 2.0E-58 T 12-10-2018 M634_02540 a7f99f3749c2f6ac980768dec828bae4 219 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 15 198 27.634 T 12-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 M634_02540 a7f99f3749c2f6ac980768dec828bae4 219 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 11 194 1.9E-74 T 12-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 M634_02540 a7f99f3749c2f6ac980768dec828bae4 219 SUPERFAMILY SSF52540 6 197 7.83E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_23290 160e4b2b926b322d66324fcdbd01a697 157 Gene3D G3DSA:2.60.40.1890 37 151 5.5E-38 T 12-10-2018 IPR036182 Copper chaperone PCuAC superfamily M634_23290 160e4b2b926b322d66324fcdbd01a697 157 SUPERFAMILY SSF110087 7 149 5.1E-50 T 12-10-2018 IPR036182 Copper chaperone PCuAC superfamily M634_23290 160e4b2b926b322d66324fcdbd01a697 157 Pfam PF04314 Copper chaperone PCu(A)C 33 141 3.2E-38 T 12-10-2018 IPR007410 Copper chaperone PCuAC M634_08555 cb4bc20b4a08ae7824594504905fd4b8 508 Pfam PF00171 Aldehyde dehydrogenase family 7 452 4.4E-49 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 M634_08555 cb4bc20b4a08ae7824594504905fd4b8 508 Gene3D G3DSA:3.40.309.10 256 440 4.1E-212 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 M634_08555 cb4bc20b4a08ae7824594504905fd4b8 508 Gene3D G3DSA:3.40.605.10 31 505 4.1E-212 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 M634_08555 cb4bc20b4a08ae7824594504905fd4b8 508 SUPERFAMILY SSF53720 6 502 5.11E-102 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 M634_02315 5651698e4b684782bbdcbfc6a0786033 598 Hamap MF_02094 Phosphogluconate dehydratase [edd]. 2 598 53.45 T 12-10-2018 M634_02315 5651698e4b684782bbdcbfc6a0786033 598 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 504 515 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 M634_02315 5651698e4b684782bbdcbfc6a0786033 598 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 3 596 1.2E-250 T 12-10-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 M634_02315 5651698e4b684782bbdcbfc6a0786033 598 SUPERFAMILY SSF143975 3 417 1.12E-131 T 12-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 M634_02315 5651698e4b684782bbdcbfc6a0786033 598 SUPERFAMILY SSF52016 418 596 4.47E-52 T 12-10-2018 M634_02315 5651698e4b684782bbdcbfc6a0786033 598 Gene3D G3DSA:3.50.30.80 418 562 7.2E-48 T 12-10-2018 M634_02315 5651698e4b684782bbdcbfc6a0786033 598 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 155 165 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 M634_02315 5651698e4b684782bbdcbfc6a0786033 598 Pfam PF00920 Dehydratase family 67 594 6.7E-149 T 12-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 M634_11710 7b06714aac8e5928f6570a6b733ce78e 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 M634_11710 7b06714aac8e5928f6570a6b733ce78e 396 SUPERFAMILY SSF53383 1 395 1.27E-112 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_11710 7b06714aac8e5928f6570a6b733ce78e 396 Gene3D G3DSA:3.90.1150.10 5 392 1.8E-160 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M634_11710 7b06714aac8e5928f6570a6b733ce78e 396 Gene3D G3DSA:3.40.640.10 60 300 1.8E-160 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_11710 7b06714aac8e5928f6570a6b733ce78e 396 Pfam PF00155 Aminotransferase class I and II 27 391 1.8E-82 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 M634_11710 7b06714aac8e5928f6570a6b733ce78e 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 1.6E-38 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 M634_11710 7b06714aac8e5928f6570a6b733ce78e 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 1.6E-38 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 M634_11710 7b06714aac8e5928f6570a6b733ce78e 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 1.6E-38 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 M634_11710 7b06714aac8e5928f6570a6b733ce78e 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 1.6E-38 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 M634_20195 85f7341ab2331d089b6d9cfc4837b67b 157 SUPERFAMILY SSF52833 1 156 1.55E-33 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M634_20195 85f7341ab2331d089b6d9cfc4837b67b 157 Pfam PF08534 Redoxin 3 154 2.0E-38 T 12-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 M634_20195 85f7341ab2331d089b6d9cfc4837b67b 157 Gene3D G3DSA:3.40.30.10 2 157 7.9E-60 T 12-10-2018 M634_17225 4ef5530c0d0b016370ef24d313e092db 242 SUPERFAMILY SSF88659 102 173 1.98E-12 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like M634_17225 4ef5530c0d0b016370ef24d313e092db 242 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 239 2.8E-25 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 M634_17225 4ef5530c0d0b016370ef24d313e092db 242 SUPERFAMILY SSF88946 22 100 3.14E-16 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 M634_17225 4ef5530c0d0b016370ef24d313e092db 242 SUPERFAMILY SSF88659 161 240 1.23E-15 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like M634_17225 4ef5530c0d0b016370ef24d313e092db 242 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 210 236 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M634_17225 4ef5530c0d0b016370ef24d313e092db 242 Gene3D G3DSA:1.10.1740.10 14 98 1.4E-17 T 12-10-2018 M634_17225 4ef5530c0d0b016370ef24d313e092db 242 Pfam PF04545 Sigma-70, region 4 189 236 2.2E-9 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 M634_17225 4ef5530c0d0b016370ef24d313e092db 242 Gene3D G3DSA:1.20.140.160 99 242 7.1E-32 T 12-10-2018 M634_17225 4ef5530c0d0b016370ef24d313e092db 242 Pfam PF04542 Sigma-70 region 2 28 101 1.7E-10 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 M634_17225 4ef5530c0d0b016370ef24d313e092db 242 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 28 240 1.1E-75 T 12-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 M634_19465 2f34e493b2d01aca1df4878f99c94c5c 248 Pfam PF01464 Transglycosylase SLT domain 80 187 1.8E-26 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 M634_19465 2f34e493b2d01aca1df4878f99c94c5c 248 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 93 121 - T 12-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 M634_19465 2f34e493b2d01aca1df4878f99c94c5c 248 SUPERFAMILY SSF53955 72 208 9.14E-36 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily M634_19465 2f34e493b2d01aca1df4878f99c94c5c 248 Gene3D G3DSA:1.10.530.10 72 217 9.8E-32 T 12-10-2018 M634_14525 0ab76eccd55c92ac82d8b13738ba9e7e 782 SUPERFAMILY SSF141371 466 554 9.42E-7 T 12-10-2018 M634_14525 0ab76eccd55c92ac82d8b13738ba9e7e 782 Pfam PF07238 PilZ domain 470 560 5.0E-14 T 12-10-2018 IPR009875 PilZ domain GO:0035438 M634_14525 0ab76eccd55c92ac82d8b13738ba9e7e 782 Pfam PF07238 PilZ domain 145 229 5.6E-9 T 12-10-2018 IPR009875 PilZ domain GO:0035438 M634_14525 0ab76eccd55c92ac82d8b13738ba9e7e 782 Gene3D G3DSA:2.40.10.220 466 582 7.2E-8 T 12-10-2018 M634_12165 716179165891451ecd240d68882b8418 342 PIRSF PIRSF005632 1 342 1.0E-195 T 12-10-2018 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit M634_12165 716179165891451ecd240d68882b8418 342 SUPERFAMILY SSF51726 3 338 3.01E-70 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 M634_12165 716179165891451ecd240d68882b8418 342 Gene3D G3DSA:3.20.20.210 1 342 6.5E-137 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 M634_12165 716179165891451ecd240d68882b8418 342 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 5 329 2.6E-37 T 12-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 M634_04305 1aac85c326dbe2e21af1ae8fde8da757 1487 SUPERFAMILY SSF56235 13 429 2.39E-148 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal M634_04305 1aac85c326dbe2e21af1ae8fde8da757 1487 SUPERFAMILY SSF69336 1214 1465 6.15E-88 T 12-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 M634_04305 1aac85c326dbe2e21af1ae8fde8da757 1487 Gene3D G3DSA:3.20.20.70 431 793 0.0 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_04305 1aac85c326dbe2e21af1ae8fde8da757 1487 Gene3D G3DSA:3.20.20.70 484 1172 0.0 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_04305 1aac85c326dbe2e21af1ae8fde8da757 1487 SUPERFAMILY SSF51395 434 1191 1.87E-251 T 12-10-2018 M634_04305 1aac85c326dbe2e21af1ae8fde8da757 1487 Gene3D G3DSA:2.160.20.60 1200 1469 3.0E-101 T 12-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 M634_04305 1aac85c326dbe2e21af1ae8fde8da757 1487 Pfam PF01645 Conserved region in glutamate synthase 794 1157 1.0E-152 T 12-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 M634_04305 1aac85c326dbe2e21af1ae8fde8da757 1487 Pfam PF00310 Glutamine amidotransferases class-II 13 426 9.0E-177 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain M634_04305 1aac85c326dbe2e21af1ae8fde8da757 1487 Pfam PF01493 GXGXG motif 1236 1419 5.9E-74 T 12-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 M634_04305 1aac85c326dbe2e21af1ae8fde8da757 1487 Gene3D G3DSA:3.60.20.10 13 546 0.0 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal M634_04305 1aac85c326dbe2e21af1ae8fde8da757 1487 Pfam PF04898 Glutamate synthase central domain 458 738 6.3E-102 T 12-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 M634_16305 8460e0e850559026247a6470475d40f7 372 SUPERFAMILY SSF64438 103 371 5.77E-66 T 12-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic M634_16305 8460e0e850559026247a6470475d40f7 372 Gene3D G3DSA:3.60.100.10 94 370 8.6E-69 T 12-10-2018 IPR037040 Cytotoxic necrotizing factor, Rho-activating domain superfamily M634_16305 8460e0e850559026247a6470475d40f7 372 Pfam PF05785 Rho-activating domain of cytotoxic necrotizing factor 97 365 1.7E-73 T 12-10-2018 IPR008430 Cytotoxic necrotizing factor, Rho-activating domain M634_13555 d0d6e1636940bd3208d754fba2c0513d 126 SUPERFAMILY SSF52172 3 125 1.99E-38 T 12-10-2018 IPR011006 CheY-like superfamily M634_13555 d0d6e1636940bd3208d754fba2c0513d 126 Pfam PF00072 Response regulator receiver domain 7 119 2.0E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_13555 d0d6e1636940bd3208d754fba2c0513d 126 SMART SM00448 5 119 1.6E-35 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_13555 d0d6e1636940bd3208d754fba2c0513d 126 Gene3D G3DSA:3.40.50.2300 1 126 6.6E-41 T 12-10-2018 M634_19500 62e2f2a87fbcd0c044a4693138131b44 398 SUPERFAMILY SSF117143 72 359 1.22E-80 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like M634_19500 62e2f2a87fbcd0c044a4693138131b44 398 Pfam PF07559 Flagellar basal body protein FlaE 172 279 5.5E-25 T 12-10-2018 IPR011491 Flagellar hook protein FlgE M634_19500 62e2f2a87fbcd0c044a4693138131b44 398 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 380 2.2E-94 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G M634_19500 62e2f2a87fbcd0c044a4693138131b44 398 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 320 396 1.5E-17 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain M634_19500 62e2f2a87fbcd0c044a4693138131b44 398 Gene3D G3DSA:2.60.98.20 144 280 3.0E-35 T 12-10-2018 IPR037058 Flagellar hook protein FlgE superfamily M634_19500 62e2f2a87fbcd0c044a4693138131b44 398 Pfam PF00460 Flagella basal body rod protein 3 33 3.0E-9 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 M634_10300 669ad8f9379a36febcbfcdfcddb83aac 208 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 138 166 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 M634_10300 669ad8f9379a36febcbfcdfcddb83aac 208 SUPERFAMILY SSF51161 5 194 8.46E-52 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily M634_10300 669ad8f9379a36febcbfcdfcddb83aac 208 Pfam PF12464 Maltose acetyltransferase 11 57 3.1E-12 T 12-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 M634_10300 669ad8f9379a36febcbfcdfcddb83aac 208 Gene3D G3DSA:2.160.10.10 1 201 4.5E-66 T 12-10-2018 M634_10300 669ad8f9379a36febcbfcdfcddb83aac 208 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 129 164 1.3E-13 T 12-10-2018 IPR001451 Hexapeptide repeat M634_10300 669ad8f9379a36febcbfcdfcddb83aac 208 SMART SM01266 4 58 4.9E-14 T 12-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 M634_06530 e9068d930eafb0bc4d116cba9b2ad277 220 Gene3D G3DSA:3.30.70.1450 141 217 3.3E-15 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 M634_06530 e9068d930eafb0bc4d116cba9b2ad277 220 SUPERFAMILY SSF51735 6 136 2.37E-34 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_06530 e9068d930eafb0bc4d116cba9b2ad277 220 Gene3D G3DSA:3.40.50.720 2 140 1.2E-34 T 12-10-2018 M634_06530 e9068d930eafb0bc4d116cba9b2ad277 220 Pfam PF02254 TrkA-N domain 8 123 6.0E-28 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 M634_06530 e9068d930eafb0bc4d116cba9b2ad277 220 Pfam PF02080 TrkA-C domain 154 214 1.2E-9 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 M634_06530 e9068d930eafb0bc4d116cba9b2ad277 220 SUPERFAMILY SSF116726 134 215 3.01E-16 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 M634_15740 75ca0555ce19e9067f92acc383936a46 422 Pfam PF10011 Predicted membrane protein (DUF2254) 15 369 1.3E-97 T 12-10-2018 IPR018723 Protein of unknown function DUF2254, membrane M634_00795 e1a226f357b9c8849e27543acc987537 302 SUPERFAMILY SSF161111 8 207 7.19E-50 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily M634_00795 e1a226f357b9c8849e27543acc987537 302 Pfam PF01545 Cation efflux family 15 206 1.5E-42 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 M634_00795 e1a226f357b9c8849e27543acc987537 302 Gene3D G3DSA:3.30.70.1350 207 290 1.4E-31 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 M634_00795 e1a226f357b9c8849e27543acc987537 302 Gene3D G3DSA:1.20.1510.10 8 206 2.6E-60 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily M634_00795 e1a226f357b9c8849e27543acc987537 302 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 286 5.1E-26 T 12-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain M634_00795 e1a226f357b9c8849e27543acc987537 302 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 11 286 3.4E-68 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 M634_00795 e1a226f357b9c8849e27543acc987537 302 SUPERFAMILY SSF160240 210 287 3.66E-24 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 M634_14560 421b6af25ca2cd328982fa90e2852d01 427 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 9.2E-27 T 12-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 M634_14560 421b6af25ca2cd328982fa90e2852d01 427 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 201 420 3.0E-74 T 12-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 M634_14560 421b6af25ca2cd328982fa90e2852d01 427 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 420 5.7E-155 T 12-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 M634_14560 421b6af25ca2cd328982fa90e2852d01 427 Pfam PF07670 Nucleoside recognition 99 195 1.1E-7 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 M634_07205 5acb8d64d62cda6378f96b891e3035c7 323 SUPERFAMILY SSF53335 91 323 1.94E-33 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_07205 5acb8d64d62cda6378f96b891e3035c7 323 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 3.2E-173 T 12-10-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like M634_07205 5acb8d64d62cda6378f96b891e3035c7 323 Gene3D G3DSA:3.40.50.150 62 293 1.3E-21 T 12-10-2018 M634_07205 5acb8d64d62cda6378f96b891e3035c7 323 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 13 322 54.537 T 12-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 M634_07205 5acb8d64d62cda6378f96b891e3035c7 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 12 321 1.3E-147 T 12-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 M634_01030 9b36159903b24e902e0f74656c262fd0 375 Pfam PF01595 Domain of unknown function DUF21 9 177 3.4E-30 T 12-10-2018 IPR002550 CNNM, transmembrane domain M634_01030 9b36159903b24e902e0f74656c262fd0 375 Gene3D G3DSA:3.10.580.10 186 315 2.9E-41 T 12-10-2018 M634_01030 9b36159903b24e902e0f74656c262fd0 375 SUPERFAMILY SSF54631 181 315 1.05E-25 T 12-10-2018 M634_01030 9b36159903b24e902e0f74656c262fd0 375 Pfam PF00571 CBS domain 262 313 6.8E-4 T 12-10-2018 IPR000644 CBS domain M634_22330 33b045e2722a6df7a762023a0cb1d56c 399 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 395 51.959 T 12-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 M634_22330 33b045e2722a6df7a762023a0cb1d56c 399 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 3 81 6.0E-34 T 12-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 M634_22330 33b045e2722a6df7a762023a0cb1d56c 399 SUPERFAMILY SSF51735 42 168 3.92E-5 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_22330 33b045e2722a6df7a762023a0cb1d56c 399 Gene3D G3DSA:3.40.50.720 1 397 9.6E-166 T 12-10-2018 M634_22330 33b045e2722a6df7a762023a0cb1d56c 399 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 84 319 3.2E-99 T 12-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 M634_22330 33b045e2722a6df7a762023a0cb1d56c 399 Pfam PF07055 Enoyl reductase FAD binding domain 326 389 1.2E-24 T 12-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 M634_00550 450135bdd6eb0377b4a0c3bf2c13abd3 571 Gene3D G3DSA:3.10.350.10 469 519 1.5E-14 T 12-10-2018 IPR036779 LysM domain superfamily M634_00550 450135bdd6eb0377b4a0c3bf2c13abd3 571 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 169 389 2.4E-49 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 M634_00550 450135bdd6eb0377b4a0c3bf2c13abd3 571 Gene3D G3DSA:3.40.630.40 155 398 2.7E-69 T 12-10-2018 M634_00550 450135bdd6eb0377b4a0c3bf2c13abd3 571 SUPERFAMILY SSF54106 472 516 7.59E-10 T 12-10-2018 M634_00550 450135bdd6eb0377b4a0c3bf2c13abd3 571 SMART SM00257 526 569 1.5E-12 T 12-10-2018 IPR018392 LysM domain M634_00550 450135bdd6eb0377b4a0c3bf2c13abd3 571 SMART SM00257 473 516 1.7E-14 T 12-10-2018 IPR018392 LysM domain M634_00550 450135bdd6eb0377b4a0c3bf2c13abd3 571 SMART SM00257 410 453 3.6E-14 T 12-10-2018 IPR018392 LysM domain M634_00550 450135bdd6eb0377b4a0c3bf2c13abd3 571 Pfam PF01476 LysM domain 411 453 1.7E-12 T 12-10-2018 IPR018392 LysM domain M634_00550 450135bdd6eb0377b4a0c3bf2c13abd3 571 Pfam PF01476 LysM domain 474 516 6.1E-12 T 12-10-2018 IPR018392 LysM domain M634_00550 450135bdd6eb0377b4a0c3bf2c13abd3 571 Pfam PF01476 LysM domain 527 569 9.1E-13 T 12-10-2018 IPR018392 LysM domain M634_00550 450135bdd6eb0377b4a0c3bf2c13abd3 571 SUPERFAMILY SSF54106 409 453 1.19E-9 T 12-10-2018 M634_00550 450135bdd6eb0377b4a0c3bf2c13abd3 571 SMART SM00646 230 389 1.2E-61 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 M634_00550 450135bdd6eb0377b4a0c3bf2c13abd3 571 SUPERFAMILY SSF54106 526 569 6.15E-10 T 12-10-2018 M634_00550 450135bdd6eb0377b4a0c3bf2c13abd3 571 Pfam PF11741 AMIN domain 34 135 8.4E-16 T 12-10-2018 IPR021731 AMIN domain M634_00550 450135bdd6eb0377b4a0c3bf2c13abd3 571 Gene3D G3DSA:2.60.40.3500 23 137 2.5E-24 T 12-10-2018 M634_00550 450135bdd6eb0377b4a0c3bf2c13abd3 571 Gene3D G3DSA:3.10.350.10 520 571 1.0E-15 T 12-10-2018 IPR036779 LysM domain superfamily M634_00550 450135bdd6eb0377b4a0c3bf2c13abd3 571 Gene3D G3DSA:3.10.350.10 401 461 2.7E-13 T 12-10-2018 IPR036779 LysM domain superfamily M634_00550 450135bdd6eb0377b4a0c3bf2c13abd3 571 SUPERFAMILY SSF53187 167 392 8.48E-53 T 12-10-2018 M634_05300 3fa6c196c1828003d09cc990165ce37e 396 Gene3D G3DSA:2.30.130.10 292 394 1.0E-31 T 12-10-2018 IPR036974 PUA domain superfamily GO:0003723 M634_05300 3fa6c196c1828003d09cc990165ce37e 396 SMART SM00359 303 386 4.1E-19 T 12-10-2018 IPR002478 PUA domain GO:0003723 M634_05300 3fa6c196c1828003d09cc990165ce37e 396 Gene3D G3DSA:3.40.1160.10 21 291 5.9E-87 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily M634_05300 3fa6c196c1828003d09cc990165ce37e 396 ProSitePatterns PS00902 Glutamate 5-kinase signature. 233 250 - T 12-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 M634_05300 3fa6c196c1828003d09cc990165ce37e 396 PIRSF PIRSF000729 26 395 7.2E-137 T 12-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 M634_05300 3fa6c196c1828003d09cc990165ce37e 396 TIGRFAM TIGR01027 proB: glutamate 5-kinase 31 392 1.1E-147 T 12-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 M634_05300 3fa6c196c1828003d09cc990165ce37e 396 SUPERFAMILY SSF88697 303 393 6.63E-25 T 12-10-2018 IPR015947 PUA-like superfamily M634_05300 3fa6c196c1828003d09cc990165ce37e 396 SUPERFAMILY SSF53633 32 282 7.07E-65 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily M634_05300 3fa6c196c1828003d09cc990165ce37e 396 Pfam PF01472 PUA domain 303 377 2.2E-23 T 12-10-2018 IPR002478 PUA domain GO:0003723 M634_05300 3fa6c196c1828003d09cc990165ce37e 396 Pfam PF00696 Amino acid kinase family 32 260 2.7E-41 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 M634_05300 3fa6c196c1828003d09cc990165ce37e 396 PRINTS PR00474 Glutamate 5-kinase family signature 68 82 1.6E-53 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 M634_05300 3fa6c196c1828003d09cc990165ce37e 396 PRINTS PR00474 Glutamate 5-kinase family signature 102 130 1.6E-53 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 M634_05300 3fa6c196c1828003d09cc990165ce37e 396 PRINTS PR00474 Glutamate 5-kinase family signature 174 201 1.6E-53 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 M634_05300 3fa6c196c1828003d09cc990165ce37e 396 PRINTS PR00474 Glutamate 5-kinase family signature 142 163 1.6E-53 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 M634_05300 3fa6c196c1828003d09cc990165ce37e 396 PRINTS PR00474 Glutamate 5-kinase family signature 235 255 1.6E-53 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 M634_05300 3fa6c196c1828003d09cc990165ce37e 396 Hamap MF_00456 Glutamate 5-kinase [proB]. 31 285 35.8 T 12-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 M634_22665 38ad780d7dc647f7986e17347e284d68 1102 Gene3D G3DSA:3.30.70.1440 679 919 1.2E-221 T 12-10-2018 M634_22665 38ad780d7dc647f7986e17347e284d68 1102 Gene3D G3DSA:1.20.1640.10 518 1083 1.2E-221 T 12-10-2018 M634_22665 38ad780d7dc647f7986e17347e284d68 1102 SUPERFAMILY SSF82693 45 139 1.12E-20 T 12-10-2018 M634_22665 38ad780d7dc647f7986e17347e284d68 1102 SUPERFAMILY SSF82714 190 271 1.44E-12 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_22665 38ad780d7dc647f7986e17347e284d68 1102 Gene3D G3DSA:3.30.70.1430 45 845 1.2E-221 T 12-10-2018 M634_22665 38ad780d7dc647f7986e17347e284d68 1102 SUPERFAMILY SSF82714 735 806 8.37E-7 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_22665 38ad780d7dc647f7986e17347e284d68 1102 SUPERFAMILY SSF82866 841 1088 3.53E-34 T 12-10-2018 M634_22665 38ad780d7dc647f7986e17347e284d68 1102 Gene3D G3DSA:1.20.1640.10 21 517 1.2E-221 T 12-10-2018 M634_22665 38ad780d7dc647f7986e17347e284d68 1102 SUPERFAMILY SSF82866 302 502 1.31E-39 T 12-10-2018 M634_22665 38ad780d7dc647f7986e17347e284d68 1102 Gene3D G3DSA:3.30.2090.10 185 275 1.2E-221 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_22665 38ad780d7dc647f7986e17347e284d68 1102 SUPERFAMILY SSF82693 568 669 4.19E-8 T 12-10-2018 M634_22665 38ad780d7dc647f7986e17347e284d68 1102 Pfam PF00873 AcrB/AcrD/AcrF family 20 1085 1.1E-150 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_22665 38ad780d7dc647f7986e17347e284d68 1102 Gene3D G3DSA:3.30.70.1430 570 678 1.2E-221 T 12-10-2018 M634_22665 38ad780d7dc647f7986e17347e284d68 1102 Gene3D G3DSA:3.30.70.1320 139 339 1.2E-221 T 12-10-2018 M634_22665 38ad780d7dc647f7986e17347e284d68 1102 PRINTS PR00702 Acriflavin resistance protein family signature 397 421 6.9E-27 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_22665 38ad780d7dc647f7986e17347e284d68 1102 PRINTS PR00702 Acriflavin resistance protein family signature 476 499 6.9E-27 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_22665 38ad780d7dc647f7986e17347e284d68 1102 PRINTS PR00702 Acriflavin resistance protein family signature 43 61 6.9E-27 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_22665 38ad780d7dc647f7986e17347e284d68 1102 PRINTS PR00702 Acriflavin resistance protein family signature 451 474 6.9E-27 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_22665 38ad780d7dc647f7986e17347e284d68 1102 PRINTS PR00702 Acriflavin resistance protein family signature 15 39 6.9E-27 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_22665 38ad780d7dc647f7986e17347e284d68 1102 PRINTS PR00702 Acriflavin resistance protein family signature 343 366 6.9E-27 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_22665 38ad780d7dc647f7986e17347e284d68 1102 SUPERFAMILY SSF82693 148 335 3.4E-9 T 12-10-2018 M634_22665 38ad780d7dc647f7986e17347e284d68 1102 Gene3D G3DSA:3.30.2090.10 732 837 1.2E-221 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_09830 29d55a59940c991546765a007e8b61b0 483 Gene3D G3DSA:3.40.50.2300 17 134 4.2E-30 T 12-10-2018 M634_09830 29d55a59940c991546765a007e8b61b0 483 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 179 192 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M634_09830 29d55a59940c991546765a007e8b61b0 483 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 457 477 8.8E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M634_09830 29d55a59940c991546765a007e8b61b0 483 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 440 457 8.8E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M634_09830 29d55a59940c991546765a007e8b61b0 483 SMART SM00382 175 321 2.9E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_09830 29d55a59940c991546765a007e8b61b0 483 Gene3D G3DSA:1.10.8.60 325 389 2.7E-17 T 12-10-2018 M634_09830 29d55a59940c991546765a007e8b61b0 483 SMART SM00448 16 127 8.2E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_09830 29d55a59940c991546765a007e8b61b0 483 Pfam PF00072 Response regulator receiver domain 18 127 7.6E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_09830 29d55a59940c991546765a007e8b61b0 483 Gene3D G3DSA:3.40.50.300 140 324 1.7E-65 T 12-10-2018 M634_09830 29d55a59940c991546765a007e8b61b0 483 SUPERFAMILY SSF52540 154 384 4.37E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_09830 29d55a59940c991546765a007e8b61b0 483 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 367 376 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site M634_09830 29d55a59940c991546765a007e8b61b0 483 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 240 255 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M634_09830 29d55a59940c991546765a007e8b61b0 483 Gene3D G3DSA:1.10.10.60 426 473 9.5E-14 T 12-10-2018 M634_09830 29d55a59940c991546765a007e8b61b0 483 Pfam PF02954 Bacterial regulatory protein, Fis family 433 474 1.1E-9 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M634_09830 29d55a59940c991546765a007e8b61b0 483 Pfam PF00158 Sigma-54 interaction domain 155 321 9.4E-69 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 M634_09830 29d55a59940c991546765a007e8b61b0 483 SUPERFAMILY SSF46689 426 475 2.06E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_09830 29d55a59940c991546765a007e8b61b0 483 SUPERFAMILY SSF52172 16 199 2.42E-38 T 12-10-2018 IPR011006 CheY-like superfamily M634_05405 6a32cde4997c6f7f76db3fc3719318e2 260 Gene3D G3DSA:1.10.150.20 167 255 3.6E-22 T 12-10-2018 M634_05405 6a32cde4997c6f7f76db3fc3719318e2 260 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 165 258 9.8E-24 T 12-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 M634_05405 6a32cde4997c6f7f76db3fc3719318e2 260 Gene3D G3DSA:3.40.50.1010 1 166 7.7E-53 T 12-10-2018 M634_05405 6a32cde4997c6f7f76db3fc3719318e2 260 SMART SM00475 3 254 7.0E-71 T 12-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 M634_05405 6a32cde4997c6f7f76db3fc3719318e2 260 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 255 45.689 T 12-10-2018 IPR022895 Flap endonuclease Xni GO:0048256 M634_05405 6a32cde4997c6f7f76db3fc3719318e2 260 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 161 2.0E-31 T 12-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 M634_05405 6a32cde4997c6f7f76db3fc3719318e2 260 SUPERFAMILY SSF47807 165 257 5.23E-21 T 12-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily M634_05405 6a32cde4997c6f7f76db3fc3719318e2 260 SMART SM00279 167 202 7.7E-10 T 12-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 M634_05405 6a32cde4997c6f7f76db3fc3719318e2 260 SUPERFAMILY SSF88723 4 164 1.28E-39 T 12-10-2018 IPR029060 PIN-like domain superfamily M634_16485 53c7acde492ace681f87ffcc681d0e98 372 Gene3D G3DSA:3.40.50.300 1 238 1.1E-74 T 12-10-2018 M634_16485 53c7acde492ace681f87ffcc681d0e98 372 Pfam PF00005 ABC transporter 20 161 2.1E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_16485 53c7acde492ace681f87ffcc681d0e98 372 Gene3D G3DSA:2.40.50.140 287 344 1.0E-50 T 12-10-2018 M634_16485 53c7acde492ace681f87ffcc681d0e98 372 Pfam PF08402 TOBE domain 281 353 9.3E-12 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 M634_16485 53c7acde492ace681f87ffcc681d0e98 372 Gene3D G3DSA:2.40.50.100 239 361 1.0E-50 T 12-10-2018 M634_16485 53c7acde492ace681f87ffcc681d0e98 372 SUPERFAMILY SSF50331 236 362 7.05E-31 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal M634_16485 53c7acde492ace681f87ffcc681d0e98 372 SMART SM00382 28 210 2.2E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_16485 53c7acde492ace681f87ffcc681d0e98 372 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_16485 53c7acde492ace681f87ffcc681d0e98 372 SUPERFAMILY SSF52540 4 244 4.39E-85 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_04355 47aa284d0e1c0e9f3c51083913258927 156 SUPERFAMILY SSF56935 29 150 1.83E-6 T 12-10-2018 M634_04355 47aa284d0e1c0e9f3c51083913258927 156 PIRSF PIRSF028680 1 156 1.1E-79 T 12-10-2018 IPR016895 Uncharacterised conserved protein UCP028680 M634_22225 209e3cc6d637a6639825497e914ec737 544 SUPERFAMILY SSF52540 1 326 1.1E-17 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_22225 209e3cc6d637a6639825497e914ec737 544 Pfam PF11398 Protein of unknown function (DUF2813) 1 370 1.4E-145 T 12-10-2018 IPR022602 Protein of unknown function DUF2813 M634_22225 209e3cc6d637a6639825497e914ec737 544 Gene3D G3DSA:3.40.50.300 1 345 1.0E-15 T 12-10-2018 M634_22775 4a4b5881093cc2393681fb5cede49bf8 461 PIRSF PIRSF006603 3 460 1.7E-65 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M634_22775 4a4b5881093cc2393681fb5cede49bf8 461 TIGRFAM TIGR00797 matE: MATE efflux family protein 28 425 1.9E-54 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M634_22775 4a4b5881093cc2393681fb5cede49bf8 461 Pfam PF01554 MatE 252 415 4.0E-18 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M634_22775 4a4b5881093cc2393681fb5cede49bf8 461 Pfam PF01554 MatE 28 188 9.3E-26 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M634_12310 b75e54a658713086ff1d76c6cdb8e2c4 334 Gene3D G3DSA:3.90.25.10 179 327 6.0E-97 T 12-10-2018 M634_12310 b75e54a658713086ff1d76c6cdb8e2c4 334 SUPERFAMILY SSF51735 1 333 1.5E-86 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_12310 b75e54a658713086ff1d76c6cdb8e2c4 334 Gene3D G3DSA:3.40.50.720 4 315 6.0E-97 T 12-10-2018 M634_12310 b75e54a658713086ff1d76c6cdb8e2c4 334 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 2.1E-53 T 12-10-2018 IPR016040 NAD(P)-binding domain M634_12310 b75e54a658713086ff1d76c6cdb8e2c4 334 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 3.3E-27 T 12-10-2018 M634_12310 b75e54a658713086ff1d76c6cdb8e2c4 334 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 3.3E-27 T 12-10-2018 M634_12310 b75e54a658713086ff1d76c6cdb8e2c4 334 PRINTS PR01713 Nucleotide sugar epimerase signature 215 230 3.3E-27 T 12-10-2018 M634_12310 b75e54a658713086ff1d76c6cdb8e2c4 334 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 3.3E-27 T 12-10-2018 M634_14350 f7069d89e5cf6efc6a0f154732da9c98 332 Gene3D G3DSA:3.40.50.2300 160 289 3.4E-73 T 12-10-2018 M634_14350 f7069d89e5cf6efc6a0f154732da9c98 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.1E-7 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M634_14350 f7069d89e5cf6efc6a0f154732da9c98 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.1E-7 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M634_14350 f7069d89e5cf6efc6a0f154732da9c98 332 SMART SM00354 1 71 2.1E-32 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M634_14350 f7069d89e5cf6efc6a0f154732da9c98 332 Pfam PF13377 Periplasmic binding protein-like domain 168 329 1.0E-37 T 12-10-2018 M634_14350 f7069d89e5cf6efc6a0f154732da9c98 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 12-10-2018 M634_14350 f7069d89e5cf6efc6a0f154732da9c98 332 Gene3D G3DSA:3.40.50.2300 56 305 3.4E-73 T 12-10-2018 M634_14350 f7069d89e5cf6efc6a0f154732da9c98 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 9.1E-19 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M634_14350 f7069d89e5cf6efc6a0f154732da9c98 332 Gene3D G3DSA:1.10.260.40 1 55 3.0E-22 T 12-10-2018 M634_14350 f7069d89e5cf6efc6a0f154732da9c98 332 SUPERFAMILY SSF47413 1 60 6.28E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M634_14350 f7069d89e5cf6efc6a0f154732da9c98 332 SUPERFAMILY SSF53822 61 330 8.83E-83 T 12-10-2018 IPR028082 Periplasmic binding protein-like I M634_08785 3c2086f24a0d4feecdc82c20f812ff59 326 Gene3D G3DSA:3.40.190.10 191 289 4.4E-37 T 12-10-2018 M634_08785 3c2086f24a0d4feecdc82c20f812ff59 326 Gene3D G3DSA:3.40.190.10 106 313 4.4E-37 T 12-10-2018 M634_08785 3c2086f24a0d4feecdc82c20f812ff59 326 Gene3D G3DSA:1.10.10.10 16 103 7.7E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_08785 3c2086f24a0d4feecdc82c20f812ff59 326 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 83 2.5E-14 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_08785 3c2086f24a0d4feecdc82c20f812ff59 326 SUPERFAMILY SSF53850 106 316 3.26E-29 T 12-10-2018 M634_08785 3c2086f24a0d4feecdc82c20f812ff59 326 SUPERFAMILY SSF46785 20 102 1.77E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_08785 3c2086f24a0d4feecdc82c20f812ff59 326 Pfam PF03466 LysR substrate binding domain 112 318 5.3E-14 T 12-10-2018 IPR005119 LysR, substrate-binding M634_06300 2d7f94604c78195744055971929a9f92 76 Pfam PF09012 FeoC like transcriptional regulator 2 54 9.0E-13 T 12-10-2018 IPR015102 Transcriptional regulator HTH-type, FeoC M634_06300 2d7f94604c78195744055971929a9f92 76 SUPERFAMILY SSF46785 1 53 4.55E-13 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_06300 2d7f94604c78195744055971929a9f92 76 Gene3D G3DSA:1.10.10.10 1 72 5.7E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_21390 f3415c72f312fe6a065e12e460a19b26 182 Gene3D G3DSA:3.40.630.30 2 169 3.4E-32 T 12-10-2018 M634_21390 f3415c72f312fe6a065e12e460a19b26 182 SUPERFAMILY SSF55729 1 154 1.36E-27 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_21390 f3415c72f312fe6a065e12e460a19b26 182 Pfam PF00583 Acetyltransferase (GNAT) family 49 141 1.8E-14 T 12-10-2018 IPR000182 GNAT domain M634_10365 36a6191eed3c06da09446b1ae4e36311 423 Gene3D G3DSA:3.40.640.10 58 317 1.5E-159 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_10365 36a6191eed3c06da09446b1ae4e36311 423 PIRSF PIRSF000521 122 422 1.6E-41 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M634_10365 36a6191eed3c06da09446b1ae4e36311 423 PIRSF PIRSF000521 2 128 4.3E-6 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M634_10365 36a6191eed3c06da09446b1ae4e36311 423 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 272 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M634_10365 36a6191eed3c06da09446b1ae4e36311 423 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 9 418 5.2E-176 T 12-10-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 M634_10365 36a6191eed3c06da09446b1ae4e36311 423 Gene3D G3DSA:3.90.1150.10 4 416 1.5E-159 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M634_10365 36a6191eed3c06da09446b1ae4e36311 423 SUPERFAMILY SSF53383 18 419 2.3E-131 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_10365 36a6191eed3c06da09446b1ae4e36311 423 Pfam PF00202 Aminotransferase class-III 23 419 6.7E-129 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M634_24135 a5ffc29a1f2ea7bc359112a4d4e33ff1 451 Gene3D G3DSA:2.40.30.10 221 322 2.7E-13 T 12-10-2018 M634_24135 a5ffc29a1f2ea7bc359112a4d4e33ff1 451 Pfam PF01794 Ferric reductase like transmembrane component 46 182 4.9E-18 T 12-10-2018 IPR013130 Ferric reductase transmembrane component-like domain M634_24135 a5ffc29a1f2ea7bc359112a4d4e33ff1 451 SUPERFAMILY SSF63380 229 324 1.09E-14 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel M634_24135 a5ffc29a1f2ea7bc359112a4d4e33ff1 451 Gene3D G3DSA:3.40.50.80 324 451 8.8E-17 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M634_24135 a5ffc29a1f2ea7bc359112a4d4e33ff1 451 Pfam PF08022 FAD-binding domain 262 323 2.0E-6 T 12-10-2018 IPR013112 FAD-binding 8 GO:0016491|GO:0055114 M634_24135 a5ffc29a1f2ea7bc359112a4d4e33ff1 451 PRINTS PR00410 Phenol hydroxylase reductase family signature 262 274 7.0E-5 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 M634_24135 a5ffc29a1f2ea7bc359112a4d4e33ff1 451 PRINTS PR00410 Phenol hydroxylase reductase family signature 415 423 7.0E-5 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 M634_24135 a5ffc29a1f2ea7bc359112a4d4e33ff1 451 PRINTS PR00410 Phenol hydroxylase reductase family signature 333 352 7.0E-5 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 M634_24135 a5ffc29a1f2ea7bc359112a4d4e33ff1 451 Pfam PF00175 Oxidoreductase NAD-binding domain 335 427 1.5E-4 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 M634_24135 a5ffc29a1f2ea7bc359112a4d4e33ff1 451 SUPERFAMILY SSF52343 326 445 2.1E-18 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M634_04935 aefc894cac883c870eac3c68d9b8ccd7 422 PIRSF PIRSF001549 2 422 3.6E-126 T 12-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 M634_04935 aefc894cac883c870eac3c68d9b8ccd7 422 Pfam PF13393 Histidyl-tRNA synthetase 10 312 6.4E-46 T 12-10-2018 M634_04935 aefc894cac883c870eac3c68d9b8ccd7 422 Gene3D G3DSA:3.30.930.10 2 323 4.4E-120 T 12-10-2018 M634_04935 aefc894cac883c870eac3c68d9b8ccd7 422 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 420 33.799 T 12-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 M634_04935 aefc894cac883c870eac3c68d9b8ccd7 422 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 409 1.2E-158 T 12-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 M634_04935 aefc894cac883c870eac3c68d9b8ccd7 422 Gene3D G3DSA:3.40.50.800 326 421 2.9E-25 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily M634_04935 aefc894cac883c870eac3c68d9b8ccd7 422 SUPERFAMILY SSF55681 5 320 3.78E-104 T 12-10-2018 M634_04935 aefc894cac883c870eac3c68d9b8ccd7 422 Pfam PF03129 Anticodon binding domain 329 420 2.3E-11 T 12-10-2018 IPR004154 Anticodon-binding M634_04935 aefc894cac883c870eac3c68d9b8ccd7 422 SUPERFAMILY SSF52954 327 421 1.28E-26 T 12-10-2018 M634_23750 681683df9dfaaa58dd995c3b4f2a8936 411 Pfam PF12704 MacB-like periplasmic core domain 19 225 1.1E-14 T 12-10-2018 IPR025857 MacB-like periplasmic core domain M634_23750 681683df9dfaaa58dd995c3b4f2a8936 411 Pfam PF02687 FtsX-like permease family 299 403 2.6E-10 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 M634_14270 6aee7ed0cacab1b4332c9f3af0180224 1163 PIRSF PIRSF000980 1 1161 0.0 T 12-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 M634_14270 6aee7ed0cacab1b4332c9f3af0180224 1163 Gene3D G3DSA:3.40.50.10930 4 321 1.2E-127 T 12-10-2018 M634_14270 6aee7ed0cacab1b4332c9f3af0180224 1163 SUPERFAMILY SSF52980 838 1145 2.63E-76 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 M634_14270 6aee7ed0cacab1b4332c9f3af0180224 1163 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1154 21.005 T 12-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 M634_14270 6aee7ed0cacab1b4332c9f3af0180224 1163 SUPERFAMILY SSF52540 2 351 1.38E-125 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_14270 6aee7ed0cacab1b4332c9f3af0180224 1163 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1122 0.0 T 12-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 M634_14270 6aee7ed0cacab1b4332c9f3af0180224 1163 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 2 810 0.0 T 12-10-2018 M634_14270 6aee7ed0cacab1b4332c9f3af0180224 1163 Gene3D G3DSA:1.10.10.160 79 187 1.2E-127 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily M634_14270 6aee7ed0cacab1b4332c9f3af0180224 1163 Gene3D G3DSA:3.40.50.300 339 811 6.4E-194 T 12-10-2018 M634_14270 6aee7ed0cacab1b4332c9f3af0180224 1163 Gene3D G3DSA:1.10.486.10 457 669 6.4E-194 T 12-10-2018 M634_14270 6aee7ed0cacab1b4332c9f3af0180224 1163 Gene3D G3DSA:1.10.10.990 878 956 2.6E-22 T 12-10-2018 M634_14270 6aee7ed0cacab1b4332c9f3af0180224 1163 SUPERFAMILY SSF52540 365 815 2.34E-103 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_23465 b998a77cfcf8121b50d1013ea6230680 281 Pfam PF00378 Enoyl-CoA hydratase/isomerase 26 273 9.3E-45 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 M634_23465 b998a77cfcf8121b50d1013ea6230680 281 SUPERFAMILY SSF52096 16 275 4.27E-68 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily M634_23465 b998a77cfcf8121b50d1013ea6230680 281 Gene3D G3DSA:1.10.12.10 217 279 3.2E-24 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal M634_23465 b998a77cfcf8121b50d1013ea6230680 281 Gene3D G3DSA:3.90.226.10 14 215 5.9E-60 T 12-10-2018 M634_17345 b6f20ac40acf272d2c1a2a73b1c88a31 223 Hamap MF_00789 UPF0319 protein YccT [yccT]. 5 222 29.715 T 12-10-2018 IPR018635 Uncharacterised protein family UPF0319 M634_17345 b6f20ac40acf272d2c1a2a73b1c88a31 223 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 24 217 3.8E-53 T 12-10-2018 IPR018635 Uncharacterised protein family UPF0319 M634_00295 1bc87ca6c4a30ad60ce926540d347c8e 300 Gene3D G3DSA:3.20.20.220 1 299 3.6E-112 T 12-10-2018 M634_00295 1bc87ca6c4a30ad60ce926540d347c8e 300 SUPERFAMILY SSF51730 22 294 2.16E-95 T 12-10-2018 IPR029041 FAD-linked oxidoreductase-like M634_00295 1bc87ca6c4a30ad60ce926540d347c8e 300 Pfam PF02219 Methylenetetrahydrofolate reductase 17 291 1.9E-100 T 12-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 M634_00295 1bc87ca6c4a30ad60ce926540d347c8e 300 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 8.1E-103 T 12-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 M634_13665 b25c92f1dab93c4406128fe71a4cab2a 488 SMART SM00382 157 301 5.8E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_13665 b25c92f1dab93c4406128fe71a4cab2a 488 SUPERFAMILY SSF52172 6 182 5.09E-5 T 12-10-2018 IPR011006 CheY-like superfamily M634_13665 b25c92f1dab93c4406128fe71a4cab2a 488 Pfam PF00158 Sigma-54 interaction domain 137 304 1.3E-72 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 M634_13665 b25c92f1dab93c4406128fe71a4cab2a 488 Gene3D G3DSA:3.40.50.300 125 308 4.5E-66 T 12-10-2018 M634_13665 b25c92f1dab93c4406128fe71a4cab2a 488 Gene3D G3DSA:1.10.10.60 421 488 2.7E-13 T 12-10-2018 M634_13665 b25c92f1dab93c4406128fe71a4cab2a 488 Gene3D G3DSA:3.40.50.2300 1 117 1.1E-9 T 12-10-2018 M634_13665 b25c92f1dab93c4406128fe71a4cab2a 488 Pfam PF06490 Flagellar regulatory protein FleQ 6 114 3.5E-30 T 12-10-2018 IPR010518 Flagellar regulatory FleQ M634_13665 b25c92f1dab93c4406128fe71a4cab2a 488 SUPERFAMILY SSF52540 137 378 2.07E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_13665 b25c92f1dab93c4406128fe71a4cab2a 488 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 349 358 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site M634_13665 b25c92f1dab93c4406128fe71a4cab2a 488 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M634_13665 b25c92f1dab93c4406128fe71a4cab2a 488 Pfam PF02954 Bacterial regulatory protein, Fis family 444 484 1.0E-14 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M634_13665 b25c92f1dab93c4406128fe71a4cab2a 488 Gene3D G3DSA:1.10.8.60 309 385 7.0E-25 T 12-10-2018 M634_13665 b25c92f1dab93c4406128fe71a4cab2a 488 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M634_13665 b25c92f1dab93c4406128fe71a4cab2a 488 SUPERFAMILY SSF46689 349 486 7.17E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_13665 b25c92f1dab93c4406128fe71a4cab2a 488 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 450 467 1.3E-10 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M634_13665 b25c92f1dab93c4406128fe71a4cab2a 488 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 467 487 1.3E-10 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M634_04610 5a2576f442283abf172bea98a88bfd1f 375 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 5.2E-42 T 12-10-2018 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 M634_04610 5a2576f442283abf172bea98a88bfd1f 375 Pfam PF02153 Prephenate dehydrogenase 132 344 1.2E-32 T 12-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 M634_04610 5a2576f442283abf172bea98a88bfd1f 375 Gene3D G3DSA:1.10.3660.10 248 373 2.1E-49 T 12-10-2018 M634_04610 5a2576f442283abf172bea98a88bfd1f 375 Pfam PF01817 Chorismate mutase type II 9 87 2.2E-21 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 M634_04610 5a2576f442283abf172bea98a88bfd1f 375 PIRSF PIRSF001499 1 374 3.8E-186 T 12-10-2018 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 M634_04610 5a2576f442283abf172bea98a88bfd1f 375 SUPERFAMILY SSF48600 4 88 7.14E-24 T 12-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 M634_04610 5a2576f442283abf172bea98a88bfd1f 375 Gene3D G3DSA:1.20.59.10 1 80 2.0E-17 T 12-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 M634_04610 5a2576f442283abf172bea98a88bfd1f 375 SUPERFAMILY SSF48179 241 366 1.07E-40 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 M634_04610 5a2576f442283abf172bea98a88bfd1f 375 SUPERFAMILY SSF51735 91 237 3.94E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_04610 5a2576f442283abf172bea98a88bfd1f 375 Gene3D G3DSA:3.40.50.720 81 247 6.9E-43 T 12-10-2018 M634_04610 5a2576f442283abf172bea98a88bfd1f 375 SMART SM00830 9 89 3.0E-29 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 M634_00915 5af02d20ae0c8a9402091886e653d052 447 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 2.9E-43 T 12-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 M634_00915 5af02d20ae0c8a9402091886e653d052 447 SMART SM00878 336 441 1.3E-64 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 M634_00915 5af02d20ae0c8a9402091886e653d052 447 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 M634_00915 5af02d20ae0c8a9402091886e653d052 447 SUPERFAMILY SSF51246 331 444 1.36E-43 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 M634_00915 5af02d20ae0c8a9402091886e653d052 447 Gene3D G3DSA:3.30.1490.20 131 203 1.3E-156 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 M634_00915 5af02d20ae0c8a9402091886e653d052 447 Gene3D G3DSA:3.40.50.20 1 85 5.7E-34 T 12-10-2018 M634_00915 5af02d20ae0c8a9402091886e653d052 447 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 3.9E-83 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 M634_00915 5af02d20ae0c8a9402091886e653d052 447 Gene3D G3DSA:3.30.470.20 86 433 1.3E-156 T 12-10-2018 M634_00915 5af02d20ae0c8a9402091886e653d052 447 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 6.0E-38 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 M634_00915 5af02d20ae0c8a9402091886e653d052 447 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 M634_00915 5af02d20ae0c8a9402091886e653d052 447 SUPERFAMILY SSF52440 1 113 4.6E-46 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily M634_00915 5af02d20ae0c8a9402091886e653d052 447 SUPERFAMILY SSF56059 83 346 1.77E-69 T 12-10-2018 M634_00915 5af02d20ae0c8a9402091886e653d052 447 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 3.1E-243 T 12-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 M634_20055 7e1f51e6cfa9166c11a4c489764032d0 352 SMART SM00829 12 341 0.0011 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 M634_20055 7e1f51e6cfa9166c11a4c489764032d0 352 Gene3D G3DSA:3.90.180.10 13 329 5.7E-76 T 12-10-2018 M634_20055 7e1f51e6cfa9166c11a4c489764032d0 352 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 104 1.4E-11 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 M634_20055 7e1f51e6cfa9166c11a4c489764032d0 352 Pfam PF00107 Zinc-binding dehydrogenase 177 304 4.0E-17 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 M634_20055 7e1f51e6cfa9166c11a4c489764032d0 352 SUPERFAMILY SSF50129 10 176 2.13E-34 T 12-10-2018 IPR011032 GroES-like superfamily M634_20055 7e1f51e6cfa9166c11a4c489764032d0 352 Gene3D G3DSA:3.40.50.720 154 289 5.7E-76 T 12-10-2018 M634_20055 7e1f51e6cfa9166c11a4c489764032d0 352 SUPERFAMILY SSF51735 143 306 1.44E-31 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_01670 113a17d5e3b28023bed444b563b68b70 646 Pfam PF01964 Radical SAM ThiC family 144 592 5.7E-199 T 12-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 M634_01670 113a17d5e3b28023bed444b563b68b70 646 Gene3D G3DSA:3.20.20.540 214 527 1.8E-154 T 12-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 M634_01670 113a17d5e3b28023bed444b563b68b70 646 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 143 596 99.506 T 12-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 M634_01670 113a17d5e3b28023bed444b563b68b70 646 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 143 594 3.4E-219 T 12-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 M634_01670 113a17d5e3b28023bed444b563b68b70 646 Pfam PF13667 ThiC-associated domain 22 104 4.4E-34 T 12-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 M634_15530 3a846422e96727413e6a62ceb80c1de5 306 Pfam PF04960 Glutaminase 22 306 3.7E-113 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 M634_15530 3a846422e96727413e6a62ceb80c1de5 306 Hamap MF_00313 Glutaminase [glsA]. 4 306 47.208 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 M634_15530 3a846422e96727413e6a62ceb80c1de5 306 TIGRFAM TIGR03814 Gln_ase: glutaminase A 8 306 1.6E-130 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 M634_15530 3a846422e96727413e6a62ceb80c1de5 306 SUPERFAMILY SSF56601 4 306 4.07E-114 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like M634_15530 3a846422e96727413e6a62ceb80c1de5 306 Gene3D G3DSA:3.40.710.10 1 306 1.1E-109 T 12-10-2018 M634_07010 4c45538dbfcd54f56e096c282f211023 906 SMART SM01276 453 776 1.5E-42 T 12-10-2018 IPR031161 Peptidase family M60 domain M634_07010 4c45538dbfcd54f56e096c282f211023 906 Pfam PF17291 N-terminal domain of M60-like peptidases 449 537 8.9E-6 T 12-10-2018 IPR035423 M60-like domain, N-terminal M634_04010 04dfceee36ca7cfbc3f84365d17eca1a 228 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 6 227 4.2E-67 T 12-10-2018 IPR002727 Protein of unknown function DUF47 M634_04010 04dfceee36ca7cfbc3f84365d17eca1a 228 Gene3D G3DSA:1.20.58.220 2 227 3.1E-65 T 12-10-2018 IPR038078 PhoU-like domain superfamily M634_04010 04dfceee36ca7cfbc3f84365d17eca1a 228 SUPERFAMILY SSF109755 31 218 1.24E-15 T 12-10-2018 M634_04010 04dfceee36ca7cfbc3f84365d17eca1a 228 Pfam PF01865 Protein of unknown function DUF47 9 225 2.1E-65 T 12-10-2018 IPR018445 Putative phosphate transport regulator M634_07665 cf9e6df6dddbd8279549d4d990226ec2 460 SUPERFAMILY SSF47323 316 459 2.09E-40 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 M634_07665 cf9e6df6dddbd8279549d4d990226ec2 460 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 460 39.294 T 12-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 M634_07665 cf9e6df6dddbd8279549d4d990226ec2 460 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 7.5E-141 T 12-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 M634_07665 cf9e6df6dddbd8279549d4d990226ec2 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 3.6E-29 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 M634_07665 cf9e6df6dddbd8279549d4d990226ec2 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 3.6E-29 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 M634_07665 cf9e6df6dddbd8279549d4d990226ec2 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 3.6E-29 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 M634_07665 cf9e6df6dddbd8279549d4d990226ec2 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 3.6E-29 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 M634_07665 cf9e6df6dddbd8279549d4d990226ec2 460 SUPERFAMILY SSF52374 1 313 2.25E-103 T 12-10-2018 M634_07665 cf9e6df6dddbd8279549d4d990226ec2 460 Gene3D G3DSA:3.40.50.620 1 305 1.3E-137 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M634_07665 cf9e6df6dddbd8279549d4d990226ec2 460 Pfam PF09190 DALR domain 341 402 6.6E-25 T 12-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 M634_07665 cf9e6df6dddbd8279549d4d990226ec2 460 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 459 2.5E-191 T 12-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 M634_07665 cf9e6df6dddbd8279549d4d990226ec2 460 SMART SM00840 341 402 1.4E-28 T 12-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 M634_07665 cf9e6df6dddbd8279549d4d990226ec2 460 Gene3D G3DSA:1.20.120.640 306 460 6.6E-51 T 12-10-2018 M634_09565 dcdd3708a776c13b5e2247eda2853e59 576 Gene3D G3DSA:3.40.50.2300 439 574 8.8E-39 T 12-10-2018 M634_09565 dcdd3708a776c13b5e2247eda2853e59 576 SUPERFAMILY SSF55874 268 436 7.33E-46 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_09565 dcdd3708a776c13b5e2247eda2853e59 576 SUPERFAMILY SSF47384 199 280 1.84E-21 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M634_09565 dcdd3708a776c13b5e2247eda2853e59 576 Gene3D G3DSA:1.10.287.130 180 277 1.4E-26 T 12-10-2018 M634_09565 dcdd3708a776c13b5e2247eda2853e59 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 415 5.7E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_09565 dcdd3708a776c13b5e2247eda2853e59 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 434 5.7E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_09565 dcdd3708a776c13b5e2247eda2853e59 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 376 5.7E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_09565 dcdd3708a776c13b5e2247eda2853e59 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 390 5.7E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_09565 dcdd3708a776c13b5e2247eda2853e59 576 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 327 435 4.2E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_09565 dcdd3708a776c13b5e2247eda2853e59 576 SMART SM00448 456 569 3.1E-34 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_09565 dcdd3708a776c13b5e2247eda2853e59 576 SUPERFAMILY SSF52172 456 574 3.7E-35 T 12-10-2018 IPR011006 CheY-like superfamily M634_09565 dcdd3708a776c13b5e2247eda2853e59 576 Pfam PF00072 Response regulator receiver domain 459 570 8.5E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_09565 dcdd3708a776c13b5e2247eda2853e59 576 Pfam PF00512 His Kinase A (phospho-acceptor) domain 214 279 2.9E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_09565 dcdd3708a776c13b5e2247eda2853e59 576 SMART SM00388 214 279 1.3E-22 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_09565 dcdd3708a776c13b5e2247eda2853e59 576 SMART SM00387 326 437 3.3E-36 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_09565 dcdd3708a776c13b5e2247eda2853e59 576 Gene3D G3DSA:3.30.565.10 278 438 8.0E-47 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_22760 bdc412de24c59b231b99bc5c0a4ff30d 144 Gene3D G3DSA:2.20.28.140 2 37 3.1E-13 T 12-10-2018 M634_22760 bdc412de24c59b231b99bc5c0a4ff30d 144 Pfam PF00085 Thioredoxin 45 140 2.6E-27 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 M634_22760 bdc412de24c59b231b99bc5c0a4ff30d 144 Gene3D G3DSA:3.40.30.10 41 144 6.5E-32 T 12-10-2018 M634_22760 bdc412de24c59b231b99bc5c0a4ff30d 144 PIRSF PIRSF000077 38 142 5.6E-32 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 M634_22760 bdc412de24c59b231b99bc5c0a4ff30d 144 TIGRFAM TIGR01068 thioredoxin: thioredoxin 46 141 1.6E-34 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 M634_22760 bdc412de24c59b231b99bc5c0a4ff30d 144 PRINTS PR00421 Thioredoxin family signature 106 117 5.0E-8 T 12-10-2018 M634_22760 bdc412de24c59b231b99bc5c0a4ff30d 144 PRINTS PR00421 Thioredoxin family signature 58 66 5.0E-8 T 12-10-2018 M634_22760 bdc412de24c59b231b99bc5c0a4ff30d 144 PRINTS PR00421 Thioredoxin family signature 66 75 5.0E-8 T 12-10-2018 M634_22760 bdc412de24c59b231b99bc5c0a4ff30d 144 SUPERFAMILY SSF52833 28 142 4.9E-37 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M634_20805 e758068ce22954bf72df04a53a17d204 650 ProSitePatterns PS00455 Putative AMP-binding domain signature. 196 207 - T 12-10-2018 IPR020845 AMP-binding, conserved site M634_20805 e758068ce22954bf72df04a53a17d204 650 SUPERFAMILY SSF56801 13 607 2.88E-98 T 12-10-2018 M634_20805 e758068ce22954bf72df04a53a17d204 650 Gene3D G3DSA:3.40.50.12780 8 311 1.8E-37 T 12-10-2018 M634_20805 e758068ce22954bf72df04a53a17d204 650 Pfam PF00501 AMP-binding enzyme 21 471 2.1E-73 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 M634_20805 e758068ce22954bf72df04a53a17d204 650 Gene3D G3DSA:3.40.50.12780 328 467 5.5E-33 T 12-10-2018 M634_05970 0f1dc1b3fb5c270b4595c424437b7b6b 85 Gene3D G3DSA:3.30.1340.10 1 85 8.4E-32 T 12-10-2018 IPR035895 HPr-like superfamily M634_05970 0f1dc1b3fb5c270b4595c424437b7b6b 85 SUPERFAMILY SSF55594 1 82 1.96E-26 T 12-10-2018 IPR035895 HPr-like superfamily M634_05970 0f1dc1b3fb5c270b4595c424437b7b6b 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 9.7E-27 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like M634_05970 0f1dc1b3fb5c270b4595c424437b7b6b 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 3.6E-27 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like M634_05970 0f1dc1b3fb5c270b4595c424437b7b6b 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 12-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site M634_05970 0f1dc1b3fb5c270b4595c424437b7b6b 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 12-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site M634_05970 0f1dc1b3fb5c270b4595c424437b7b6b 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 9.6E-18 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like M634_05970 0f1dc1b3fb5c270b4595c424437b7b6b 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 9.6E-18 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like M634_05970 0f1dc1b3fb5c270b4595c424437b7b6b 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 9.6E-18 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like M634_13300 70a9756154c715a099543e5a40cce46a 181 Pfam PF00156 Phosphoribosyl transferase domain 30 155 1.3E-15 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 M634_13300 70a9756154c715a099543e5a40cce46a 181 SUPERFAMILY SSF53271 11 178 2.02E-52 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like M634_13300 70a9756154c715a099543e5a40cce46a 181 Gene3D G3DSA:3.40.50.2020 1 181 6.6E-66 T 12-10-2018 M634_13300 70a9756154c715a099543e5a40cce46a 181 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 9 178 37.806 T 12-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 M634_13300 70a9756154c715a099543e5a40cce46a 181 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 9 177 2.3E-72 T 12-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 M634_22395 1a979cdf5555e117ebeca5332f75adbd 877 Gene3D G3DSA:3.30.1490.20 495 572 1.5E-55 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 M634_22395 1a979cdf5555e117ebeca5332f75adbd 877 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 140 274 3.8E-43 T 12-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain M634_22395 1a979cdf5555e117ebeca5332f75adbd 877 Gene3D G3DSA:3.40.630.30 713 877 1.1E-38 T 12-10-2018 M634_22395 1a979cdf5555e117ebeca5332f75adbd 877 Gene3D G3DSA:3.30.470.20 476 687 1.5E-55 T 12-10-2018 M634_22395 1a979cdf5555e117ebeca5332f75adbd 877 SMART SM00881 7 102 9.7E-21 T 12-10-2018 IPR003781 CoA-binding GO:0048037 M634_22395 1a979cdf5555e117ebeca5332f75adbd 877 SUPERFAMILY SSF55729 718 862 6.2E-19 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_22395 1a979cdf5555e117ebeca5332f75adbd 877 Pfam PF13380 CoA binding domain 12 124 2.3E-16 T 12-10-2018 IPR003781 CoA-binding GO:0048037 M634_22395 1a979cdf5555e117ebeca5332f75adbd 877 SUPERFAMILY SSF56059 477 683 1.1E-26 T 12-10-2018 M634_22395 1a979cdf5555e117ebeca5332f75adbd 877 Pfam PF13549 ATP-grasp domain 470 690 4.4E-68 T 12-10-2018 M634_22395 1a979cdf5555e117ebeca5332f75adbd 877 Pfam PF00583 Acetyltransferase (GNAT) family 756 859 1.7E-7 T 12-10-2018 IPR000182 GNAT domain M634_22395 1a979cdf5555e117ebeca5332f75adbd 877 Gene3D G3DSA:3.40.50.261 279 449 1.2E-49 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 M634_22395 1a979cdf5555e117ebeca5332f75adbd 877 SUPERFAMILY SSF51735 2 128 1.43E-26 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_22395 1a979cdf5555e117ebeca5332f75adbd 877 Gene3D G3DSA:3.40.50.720 1 118 9.2E-27 T 12-10-2018 M634_22395 1a979cdf5555e117ebeca5332f75adbd 877 Gene3D G3DSA:3.40.50.261 119 277 1.6E-43 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 M634_22395 1a979cdf5555e117ebeca5332f75adbd 877 SUPERFAMILY SSF52210 281 441 1.57E-38 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 M634_22395 1a979cdf5555e117ebeca5332f75adbd 877 SUPERFAMILY SSF52210 118 276 1.7E-32 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 M634_14400 9fcf785958683a3099518164188c2987 150 Pfam PF04074 Domain of unknown function (DUF386) 3 140 1.1E-25 T 12-10-2018 IPR004375 YhcH/YjgK/YiaL family M634_14400 9fcf785958683a3099518164188c2987 150 Gene3D G3DSA:2.60.120.370 1 143 6.3E-14 T 12-10-2018 IPR037012 YhcH/YjgK/YiaL superfamily M634_14400 9fcf785958683a3099518164188c2987 150 SUPERFAMILY SSF51197 1 143 2.75E-24 T 12-10-2018 M634_06455 015bf232b98922e0036a90d7d1b74931 517 Gene3D G3DSA:1.20.200.10 204 511 1.6E-101 T 12-10-2018 M634_06455 015bf232b98922e0036a90d7d1b74931 517 Pfam PF00221 Aromatic amino acid lyase 16 469 5.1E-164 T 12-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 M634_06455 015bf232b98922e0036a90d7d1b74931 517 Gene3D G3DSA:1.10.275.10 9 203 3.1E-57 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal M634_06455 015bf232b98922e0036a90d7d1b74931 517 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 145 161 - T 12-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 M634_06455 015bf232b98922e0036a90d7d1b74931 517 SUPERFAMILY SSF48557 5 513 2.83E-172 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 M634_16575 c48ae2f320633f88262a635f6c4a27fd 623 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 147 2.4E-35 T 12-10-2018 IPR002178 PTS EIIA type-2 domain M634_16575 c48ae2f320633f88262a635f6c4a27fd 623 SUPERFAMILY SSF55804 1 148 9.03E-40 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 M634_16575 c48ae2f320633f88262a635f6c4a27fd 623 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 7 133 1.5E-38 T 12-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 M634_16575 c48ae2f320633f88262a635f6c4a27fd 623 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 528 610 4.1E-27 T 12-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 M634_16575 c48ae2f320633f88262a635f6c4a27fd 623 SUPERFAMILY SSF52794 526 618 8.37E-29 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 M634_16575 c48ae2f320633f88262a635f6c4a27fd 623 Pfam PF02378 Phosphotransferase system, EIIC 189 446 3.7E-12 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 M634_16575 c48ae2f320633f88262a635f6c4a27fd 623 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 528 618 9.3E-17 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 M634_16575 c48ae2f320633f88262a635f6c4a27fd 623 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 176 497 5.7E-78 T 12-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 M634_16575 c48ae2f320633f88262a635f6c4a27fd 623 Gene3D G3DSA:3.40.930.10 1 148 3.7E-43 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 M634_16575 c48ae2f320633f88262a635f6c4a27fd 623 Gene3D G3DSA:3.40.50.2300 523 623 1.5E-33 T 12-10-2018 M634_08110 234261d568ae564bcb737702e22ba9e3 195 Gene3D G3DSA:1.10.150.20 113 195 1.2E-16 T 12-10-2018 M634_08110 234261d568ae564bcb737702e22ba9e3 195 SUPERFAMILY SSF159894 3 103 1.94E-26 T 12-10-2018 M634_08110 234261d568ae564bcb737702e22ba9e3 195 Pfam PF04993 TfoX N-terminal domain 11 101 4.7E-23 T 12-10-2018 IPR007076 TfoX, N-terminal M634_08110 234261d568ae564bcb737702e22ba9e3 195 Gene3D G3DSA:3.30.1460.30 4 102 2.8E-17 T 12-10-2018 M634_08110 234261d568ae564bcb737702e22ba9e3 195 Pfam PF04994 TfoX C-terminal domain 114 192 7.8E-28 T 12-10-2018 IPR007077 TfoX, C-terminal M634_08110 234261d568ae564bcb737702e22ba9e3 195 PIRSF PIRSF028788 6 195 3.0E-35 T 12-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type M634_06160 2b7abd7da9bfaeb3a33d7c797e2613f8 378 Pfam PF01979 Amidohydrolase family 51 374 1.3E-37 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 M634_06160 2b7abd7da9bfaeb3a33d7c797e2613f8 378 Gene3D G3DSA:3.20.20.140 55 341 5.0E-143 T 12-10-2018 M634_06160 2b7abd7da9bfaeb3a33d7c797e2613f8 378 SUPERFAMILY SSF51338 1 53 1.5E-19 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 M634_06160 2b7abd7da9bfaeb3a33d7c797e2613f8 378 SUPERFAMILY SSF51556 54 347 7.42E-102 T 12-10-2018 IPR032466 Metal-dependent hydrolase M634_06160 2b7abd7da9bfaeb3a33d7c797e2613f8 378 PIRSF PIRSF038994 1 378 1.3E-121 T 12-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 M634_06160 2b7abd7da9bfaeb3a33d7c797e2613f8 378 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 374 8.2E-155 T 12-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 M634_06160 2b7abd7da9bfaeb3a33d7c797e2613f8 378 Gene3D G3DSA:2.30.40.10 6 373 5.0E-143 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 M634_13295 7e0f229b2ccdcb4481bc5bfa2bc11eaa 711 Gene3D G3DSA:3.30.300.150 568 693 2.3E-40 T 12-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_13295 7e0f229b2ccdcb4481bc5bfa2bc11eaa 711 SUPERFAMILY SSF52540 32 222 3.7E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_13295 7e0f229b2ccdcb4481bc5bfa2bc11eaa 711 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 570 708 2.7E-50 T 12-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_13295 7e0f229b2ccdcb4481bc5bfa2bc11eaa 711 SMART SM00382 37 179 1.4E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_13295 7e0f229b2ccdcb4481bc5bfa2bc11eaa 711 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 359 2.7E-32 T 12-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 M634_13295 7e0f229b2ccdcb4481bc5bfa2bc11eaa 711 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 492 568 2.1E-23 T 12-10-2018 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_13295 7e0f229b2ccdcb4481bc5bfa2bc11eaa 711 Pfam PF13177 DNA polymerase III, delta subunit 20 178 7.6E-44 T 12-10-2018 M634_13295 7e0f229b2ccdcb4481bc5bfa2bc11eaa 711 Gene3D G3DSA:3.40.50.300 13 177 3.8E-101 T 12-10-2018 M634_13295 7e0f229b2ccdcb4481bc5bfa2bc11eaa 711 Gene3D G3DSA:1.10.8.60 8 240 3.8E-101 T 12-10-2018 M634_13295 7e0f229b2ccdcb4481bc5bfa2bc11eaa 711 SUPERFAMILY SSF48019 243 360 2.55E-32 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 M634_13295 7e0f229b2ccdcb4481bc5bfa2bc11eaa 711 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 1.5E-132 T 12-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 M634_13295 7e0f229b2ccdcb4481bc5bfa2bc11eaa 711 Gene3D G3DSA:1.20.272.10 242 361 9.2E-40 T 12-10-2018 M634_23500 d509a0870d63f0d6bb0bf0bd8c987b51 643 SMART SM00487 25 223 6.3E-62 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M634_23500 d509a0870d63f0d6bb0bf0bd8c987b51 643 Pfam PF03880 DbpA RNA binding domain 475 542 4.3E-16 T 12-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain M634_23500 d509a0870d63f0d6bb0bf0bd8c987b51 643 SUPERFAMILY SSF52540 74 361 3.5E-75 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_23500 d509a0870d63f0d6bb0bf0bd8c987b51 643 Gene3D G3DSA:3.40.50.300 1 211 3.3E-74 T 12-10-2018 M634_23500 d509a0870d63f0d6bb0bf0bd8c987b51 643 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 547 41.701 T 12-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 M634_23500 d509a0870d63f0d6bb0bf0bd8c987b51 643 SMART SM00490 259 340 1.3E-34 T 12-10-2018 IPR001650 Helicase, C-terminal M634_23500 d509a0870d63f0d6bb0bf0bd8c987b51 643 Gene3D G3DSA:3.40.50.300 215 434 3.1E-53 T 12-10-2018 M634_23500 d509a0870d63f0d6bb0bf0bd8c987b51 643 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site M634_23500 d509a0870d63f0d6bb0bf0bd8c987b51 643 Pfam PF00271 Helicase conserved C-terminal domain 232 340 6.7E-30 T 12-10-2018 IPR001650 Helicase, C-terminal M634_23500 d509a0870d63f0d6bb0bf0bd8c987b51 643 Gene3D G3DSA:3.30.70.330 476 545 9.7E-10 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily M634_23500 d509a0870d63f0d6bb0bf0bd8c987b51 643 Pfam PF00270 DEAD/DEAH box helicase 30 195 5.7E-50 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 M634_15770 755c0cf19972bfe1f3a8865dde3d784a 952 SUPERFAMILY SSF46589 885 949 8.89E-18 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 M634_15770 755c0cf19972bfe1f3a8865dde3d784a 952 Pfam PF08264 Anticodon-binding domain of tRNA 674 826 5.1E-39 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 M634_15770 755c0cf19972bfe1f3a8865dde3d784a 952 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 M634_15770 755c0cf19972bfe1f3a8865dde3d784a 952 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 950 16.05 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 M634_15770 755c0cf19972bfe1f3a8865dde3d784a 952 SUPERFAMILY SSF52374 1 641 2.38E-135 T 12-10-2018 M634_15770 755c0cf19972bfe1f3a8865dde3d784a 952 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 885 945 6.9E-18 T 12-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 M634_15770 755c0cf19972bfe1f3a8865dde3d784a 952 SUPERFAMILY SSF47323 642 899 5.98E-66 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 M634_15770 755c0cf19972bfe1f3a8865dde3d784a 952 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 933 0.0 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 M634_15770 755c0cf19972bfe1f3a8865dde3d784a 952 Gene3D G3DSA:3.40.50.620 359 577 2.1E-57 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M634_15770 755c0cf19972bfe1f3a8865dde3d784a 952 Gene3D G3DSA:3.40.50.620 2 196 1.0E-55 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M634_15770 755c0cf19972bfe1f3a8865dde3d784a 952 Gene3D G3DSA:1.10.287.380 878 950 6.7E-19 T 12-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 M634_15770 755c0cf19972bfe1f3a8865dde3d784a 952 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 1.4E-34 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 M634_15770 755c0cf19972bfe1f3a8865dde3d784a 952 PRINTS PR00986 Valyl-tRNA synthetase signature 469 490 1.4E-34 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 M634_15770 755c0cf19972bfe1f3a8865dde3d784a 952 PRINTS PR00986 Valyl-tRNA synthetase signature 500 518 1.4E-34 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 M634_15770 755c0cf19972bfe1f3a8865dde3d784a 952 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 1.4E-34 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 M634_15770 755c0cf19972bfe1f3a8865dde3d784a 952 PRINTS PR00986 Valyl-tRNA synthetase signature 369 382 1.4E-34 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 M634_15770 755c0cf19972bfe1f3a8865dde3d784a 952 Gene3D G3DSA:3.90.740.10 197 358 5.5E-49 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 M634_15770 755c0cf19972bfe1f3a8865dde3d784a 952 SUPERFAMILY SSF50677 191 365 4.71E-59 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 M634_15770 755c0cf19972bfe1f3a8865dde3d784a 952 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 631 2.3E-226 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 M634_15770 755c0cf19972bfe1f3a8865dde3d784a 952 Gene3D G3DSA:1.10.730.10 578 818 3.2E-70 T 12-10-2018 M634_08880 48bdaa53e7b36f2cbff2684d6ff24c83 128 SUPERFAMILY SSF51182 10 127 7.37E-26 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily M634_08880 48bdaa53e7b36f2cbff2684d6ff24c83 128 Hamap MF_01255 L-ectoine synthase [ectC]. 1 128 39.318 T 12-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 M634_08880 48bdaa53e7b36f2cbff2684d6ff24c83 128 ProDom PD080544 SYNTHASE 4.2.1.- LYASE L-ECTOINE DEHYDRATASE N-ACETYLDIAMINOBUTYRATE ECTOINE ENZYME SYNTHASE:ECTOINE ECTC 1 118 9.0E-59 T 12-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 M634_08880 48bdaa53e7b36f2cbff2684d6ff24c83 128 Gene3D G3DSA:2.60.120.10 1 116 6.5E-45 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M634_08880 48bdaa53e7b36f2cbff2684d6ff24c83 128 Pfam PF06339 Ectoine synthase 1 127 3.7E-61 T 12-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 M634_02090 9b5c32bc0c961a8d3e5bd514a1367a70 189 SUPERFAMILY SSF57783 16 64 2.98E-14 T 12-10-2018 M634_02090 9b5c32bc0c961a8d3e5bd514a1367a70 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 67 103 1.0E-16 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 M634_02090 9b5c32bc0c961a8d3e5bd514a1367a70 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 21 56 1.9E-14 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 M634_02090 9b5c32bc0c961a8d3e5bd514a1367a70 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 115 152 2.3E-16 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 M634_02090 9b5c32bc0c961a8d3e5bd514a1367a70 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 155 186 0.86 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 M634_02090 9b5c32bc0c961a8d3e5bd514a1367a70 189 Gene3D G3DSA:3.30.65.10 11 62 4.4E-9 T 12-10-2018 M634_02090 9b5c32bc0c961a8d3e5bd514a1367a70 189 Gene3D G3DSA:3.30.65.10 63 105 2.1E-8 T 12-10-2018 M634_02090 9b5c32bc0c961a8d3e5bd514a1367a70 189 SUPERFAMILY SSF57783 109 147 7.82E-5 T 12-10-2018 M634_02090 9b5c32bc0c961a8d3e5bd514a1367a70 189 SUPERFAMILY SSF57783 66 109 4.76E-14 T 12-10-2018 M634_00895 123250996b453b72c55eae2a92e9c053 209 SUPERFAMILY SSF53098 26 198 3.32E-35 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M634_00895 123250996b453b72c55eae2a92e9c053 209 Gene3D G3DSA:3.30.420.10 23 201 2.8E-34 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M634_00895 123250996b453b72c55eae2a92e9c053 209 Pfam PF00929 Exonuclease 31 193 1.1E-18 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III M634_00895 123250996b453b72c55eae2a92e9c053 209 SMART SM00479 29 202 5.1E-27 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III M634_18060 069c4ca3a9df6ba2fcb21c55d0dbdd03 497 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 437 4.0E-94 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 M634_18060 069c4ca3a9df6ba2fcb21c55d0dbdd03 497 Pfam PF00474 Sodium:solute symporter family 36 437 4.0E-105 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 M634_18060 069c4ca3a9df6ba2fcb21c55d0dbdd03 497 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 7 490 6.7E-217 T 12-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 M634_18060 069c4ca3a9df6ba2fcb21c55d0dbdd03 497 Gene3D G3DSA:1.20.1730.10 9 494 4.8E-95 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily M634_19495 b48e501c7cac3af4024273fa48a76252 227 Pfam PF13861 FlgD Tudor-like domain 94 223 8.1E-12 T 12-10-2018 IPR025963 FlgD Tudor-like domain M634_19495 b48e501c7cac3af4024273fa48a76252 227 Pfam PF13860 FlgD Ig-like domain 114 182 9.7E-10 T 12-10-2018 IPR025965 FlgD Ig-like domain M634_19495 b48e501c7cac3af4024273fa48a76252 227 Gene3D G3DSA:2.30.30.910 100 222 7.8E-17 T 12-10-2018 M634_19495 b48e501c7cac3af4024273fa48a76252 227 Gene3D G3DSA:2.60.40.4070 111 190 7.8E-17 T 12-10-2018 M634_19495 b48e501c7cac3af4024273fa48a76252 227 Pfam PF03963 Flagellar hook capping protein - N-terminal region 16 85 1.4E-18 T 12-10-2018 IPR005648 Flagellar hook capping protein M634_04530 83151c744029396f73fa497014920730 86 Gene3D G3DSA:1.20.58.110 1 86 3.9E-30 T 12-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_04530 83151c744029396f73fa497014920730 86 Pfam PF01649 Ribosomal protein S20 2 84 5.4E-28 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_04530 83151c744029396f73fa497014920730 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 6.9E-32 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_04530 83151c744029396f73fa497014920730 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 3.0E-36 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_04530 83151c744029396f73fa497014920730 86 SUPERFAMILY SSF46992 3 86 1.1E-32 T 12-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_04530 83151c744029396f73fa497014920730 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.696 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_18675 22782b236bec2af4d5e64f5dcf0b9fcf 155 Gene3D G3DSA:3.40.50.1000 1 155 8.1E-29 T 12-10-2018 IPR023214 HAD superfamily M634_18675 22782b236bec2af4d5e64f5dcf0b9fcf 155 Pfam PF13419 Haloacid dehalogenase-like hydrolase 24 130 1.4E-11 T 12-10-2018 M634_18675 22782b236bec2af4d5e64f5dcf0b9fcf 155 SUPERFAMILY SSF56784 4 154 1.0E-23 T 12-10-2018 IPR036412 HAD-like superfamily M634_03600 73c8be464f34eed3e8a259860e608353 158 SUPERFAMILY SSF55252 84 153 4.05E-19 T 12-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 M634_03600 73c8be464f34eed3e8a259860e608353 158 Pfam PF02863 Arginine repressor, C-terminal domain 84 149 9.1E-22 T 12-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 M634_03600 73c8be464f34eed3e8a259860e608353 158 TIGRFAM TIGR01529 argR_whole: arginine repressor 12 153 5.7E-44 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 M634_03600 73c8be464f34eed3e8a259860e608353 158 PRINTS PR01467 Bacterial arginine repressor signature 92 105 1.8E-24 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 M634_03600 73c8be464f34eed3e8a259860e608353 158 PRINTS PR01467 Bacterial arginine repressor signature 27 40 1.8E-24 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 M634_03600 73c8be464f34eed3e8a259860e608353 158 PRINTS PR01467 Bacterial arginine repressor signature 123 138 1.8E-24 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 M634_03600 73c8be464f34eed3e8a259860e608353 158 PRINTS PR01467 Bacterial arginine repressor signature 44 59 1.8E-24 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 M634_03600 73c8be464f34eed3e8a259860e608353 158 Hamap MF_00173 Arginine repressor [argR]. 1 157 59.255 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 M634_03600 73c8be464f34eed3e8a259860e608353 158 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 91 148 2.0E-20 T 12-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 M634_03600 73c8be464f34eed3e8a259860e608353 158 Pfam PF01316 Arginine repressor, DNA binding domain 8 76 8.9E-24 T 12-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 M634_03600 73c8be464f34eed3e8a259860e608353 158 Gene3D G3DSA:1.10.10.10 3 76 8.1E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_03600 73c8be464f34eed3e8a259860e608353 158 Gene3D G3DSA:3.30.1360.40 77 158 5.8E-34 T 12-10-2018 M634_03600 73c8be464f34eed3e8a259860e608353 158 SUPERFAMILY SSF46785 5 79 3.45E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_21325 4dabb64790eb8aa5886f27bf02b598d9 299 Gene3D G3DSA:2.60.200.40 123 283 1.3E-78 T 12-10-2018 M634_21325 4dabb64790eb8aa5886f27bf02b598d9 299 SUPERFAMILY SSF111331 1 295 6.54E-75 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily M634_21325 4dabb64790eb8aa5886f27bf02b598d9 299 Gene3D G3DSA:3.40.50.10330 22 286 1.3E-78 T 12-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 M634_21325 4dabb64790eb8aa5886f27bf02b598d9 299 Pfam PF00781 Diacylglycerol kinase catalytic domain 8 125 2.4E-27 T 12-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 M634_21325 4dabb64790eb8aa5886f27bf02b598d9 299 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 4 292 4.2E-63 T 12-10-2018 IPR005218 Diacylglycerol/lipid kinase M634_21325 4dabb64790eb8aa5886f27bf02b598d9 299 SMART SM00046 3 130 5.5E-13 T 12-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 M634_21325 4dabb64790eb8aa5886f27bf02b598d9 299 Hamap MF_01377 Probable lipid kinase YegS [yegS]. 3 298 43.599 T 12-10-2018 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 M634_03275 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.3E-18 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03275 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.3E-18 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03275 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.3E-18 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03275 b67c847ad62a5c40d2c05037ccb34615 103 SUPERFAMILY SSF54999 5 101 7.06E-37 T 12-10-2018 IPR036838 Ribosomal protein S10 domain superfamily M634_03275 b67c847ad62a5c40d2c05037ccb34615 103 Gene3D G3DSA:3.30.70.600 1 103 2.2E-38 T 12-10-2018 IPR036838 Ribosomal protein S10 domain superfamily M634_03275 b67c847ad62a5c40d2c05037ccb34615 103 SMART SM01403 7 101 6.6E-56 T 12-10-2018 IPR027486 Ribosomal protein S10 domain M634_03275 b67c847ad62a5c40d2c05037ccb34615 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 2.8E-35 T 12-10-2018 IPR027486 Ribosomal protein S10 domain M634_03275 b67c847ad62a5c40d2c05037ccb34615 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 12-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03275 b67c847ad62a5c40d2c05037ccb34615 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.1E-45 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03275 b67c847ad62a5c40d2c05037ccb34615 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.839 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_05870 3bc9cdab10bd865c7d73590857f09d17 308 PIRSF PIRSF002867 1 308 2.2E-103 T 12-10-2018 IPR024181 Chemotaxis response regulator CheV M634_05870 3bc9cdab10bd865c7d73590857f09d17 308 Pfam PF01584 CheW-like domain 21 155 5.6E-34 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 M634_05870 3bc9cdab10bd865c7d73590857f09d17 308 Gene3D G3DSA:2.30.30.40 23 147 3.0E-28 T 12-10-2018 M634_05870 3bc9cdab10bd865c7d73590857f09d17 308 Gene3D G3DSA:2.40.50.180 39 153 3.0E-28 T 12-10-2018 M634_05870 3bc9cdab10bd865c7d73590857f09d17 308 SUPERFAMILY SSF52172 183 306 9.39E-26 T 12-10-2018 IPR011006 CheY-like superfamily M634_05870 3bc9cdab10bd865c7d73590857f09d17 308 SMART SM00260 17 153 1.3E-23 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 M634_05870 3bc9cdab10bd865c7d73590857f09d17 308 SUPERFAMILY SSF50341 16 157 1.7E-35 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 M634_05870 3bc9cdab10bd865c7d73590857f09d17 308 Gene3D G3DSA:3.40.50.2300 168 308 1.6E-25 T 12-10-2018 M634_05870 3bc9cdab10bd865c7d73590857f09d17 308 SMART SM00448 182 302 6.8E-20 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_05870 3bc9cdab10bd865c7d73590857f09d17 308 Pfam PF00072 Response regulator receiver domain 184 302 2.6E-18 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_02520 709f724f52e14a38428f0128b485aded 354 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 253 265 - T 12-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 M634_02520 709f724f52e14a38428f0128b485aded 354 Pfam PF00490 Delta-aminolevulinic acid dehydratase 13 333 1.1E-141 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 M634_02520 709f724f52e14a38428f0128b485aded 354 PIRSF PIRSF001415 3 337 2.2E-152 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 M634_02520 709f724f52e14a38428f0128b485aded 354 SUPERFAMILY SSF51569 8 336 2.34E-145 T 12-10-2018 M634_02520 709f724f52e14a38428f0128b485aded 354 Gene3D G3DSA:3.20.20.70 2 338 7.2E-148 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_02520 709f724f52e14a38428f0128b485aded 354 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 161 180 1.8E-57 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 M634_02520 709f724f52e14a38428f0128b485aded 354 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 253 269 1.8E-57 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 M634_02520 709f724f52e14a38428f0128b485aded 354 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 199 218 1.8E-57 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 M634_02520 709f724f52e14a38428f0128b485aded 354 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 130 144 1.8E-57 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 M634_02520 709f724f52e14a38428f0128b485aded 354 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 278 293 1.8E-57 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 M634_02520 709f724f52e14a38428f0128b485aded 354 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 308 327 1.8E-57 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 M634_02520 709f724f52e14a38428f0128b485aded 354 SMART SM01004 10 334 9.1E-246 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 M634_00340 22b181e49096b7a6182d907e0a8aa392 156 SUPERFAMILY SSF47973 6 149 5.36E-60 T 12-10-2018 IPR036823 Ribosomal protein S7 domain superfamily M634_00340 22b181e49096b7a6182d907e0a8aa392 156 Gene3D G3DSA:1.10.455.10 2 155 3.2E-65 T 12-10-2018 IPR036823 Ribosomal protein S7 domain superfamily M634_00340 22b181e49096b7a6182d907e0a8aa392 156 PIRSF PIRSF002122 3 156 2.4E-63 T 12-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 M634_00340 22b181e49096b7a6182d907e0a8aa392 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 1.4E-71 T 12-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 M634_00340 22b181e49096b7a6182d907e0a8aa392 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 12-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_00340 22b181e49096b7a6182d907e0a8aa392 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 4.3E-66 T 12-10-2018 IPR023798 Ribosomal protein S7 domain M634_00340 22b181e49096b7a6182d907e0a8aa392 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 36.04 T 12-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 M634_01915 1b81adc832c18e96652fea14c4502b38 177 SUPERFAMILY SSF47928 3 105 2.75E-28 T 12-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_01915 1b81adc832c18e96652fea14c4502b38 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.959 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_01915 1b81adc832c18e96652fea14c4502b38 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 12-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_01915 1b81adc832c18e96652fea14c4502b38 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 3.5E-28 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_01915 1b81adc832c18e96652fea14c4502b38 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 3.5E-28 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_01915 1b81adc832c18e96652fea14c4502b38 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 3.5E-28 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_01915 1b81adc832c18e96652fea14c4502b38 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 3.5E-28 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_01915 1b81adc832c18e96652fea14c4502b38 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 3.5E-28 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_01915 1b81adc832c18e96652fea14c4502b38 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 8.7E-64 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_01915 1b81adc832c18e96652fea14c4502b38 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 8.5E-54 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_01915 1b81adc832c18e96652fea14c4502b38 177 Gene3D G3DSA:1.10.520.20 2 106 3.3E-38 T 12-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_03685 c363b669eec3910269195a42dad7f624 260 Pfam PF04784 Protein of unknown function, DUF547 89 198 2.0E-24 T 12-10-2018 IPR006869 Domain of unknown function DUF547 M634_19545 62a51e172d823b5daa4fc8d8f49cec20 904 PIRSF PIRSF035905 1 904 0.0 T 12-10-2018 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein M634_19545 62a51e172d823b5daa4fc8d8f49cec20 904 Pfam PF10101 Predicted membrane protein (DUF2339) 143 893 3.9E-110 T 12-10-2018 IPR019286 Protein of unknown function DUF2339, transmembrane M634_04405 7ccb9f4f4cc8e0a8374bdc5b3137be8f 258 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 38.941 T 12-10-2018 IPR005583 Peroxide stress protein YaaA M634_04405 7ccb9f4f4cc8e0a8374bdc5b3137be8f 258 Pfam PF03883 Peroxide stress protein YaaA 1 243 4.1E-95 T 12-10-2018 IPR005583 Peroxide stress protein YaaA M634_23910 281284bf0fe0f07286da49e4421df42a 296 Pfam PF00892 EamA-like transporter family 8 142 3.9E-8 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M634_23910 281284bf0fe0f07286da49e4421df42a 296 Pfam PF00892 EamA-like transporter family 151 282 5.3E-9 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M634_23910 281284bf0fe0f07286da49e4421df42a 296 SUPERFAMILY SSF103481 192 285 6.02E-9 T 12-10-2018 M634_23910 281284bf0fe0f07286da49e4421df42a 296 SUPERFAMILY SSF103481 44 142 1.19E-8 T 12-10-2018 M634_07090 e0ecd7fa9ca829d46474a72f99c8346a 236 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 36 204 5.9E-69 T 12-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 M634_07090 e0ecd7fa9ca829d46474a72f99c8346a 236 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 37 216 3.6E-75 T 12-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 M634_07090 e0ecd7fa9ca829d46474a72f99c8346a 236 Gene3D G3DSA:3.40.630.70 63 236 3.2E-63 T 12-10-2018 M634_07090 e0ecd7fa9ca829d46474a72f99c8346a 236 SUPERFAMILY SSF55729 5 229 2.12E-87 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_07090 e0ecd7fa9ca829d46474a72f99c8346a 236 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 236 91.834 T 12-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 M634_07090 e0ecd7fa9ca829d46474a72f99c8346a 236 Gene3D G3DSA:2.30.210.20 5 62 1.2E-22 T 12-10-2018 M634_23420 42ff2a940e8988538f479e0eb14a012d 300 Gene3D G3DSA:3.40.50.720 1 167 2.5E-52 T 12-10-2018 M634_23420 42ff2a940e8988538f479e0eb14a012d 300 SUPERFAMILY SSF51735 3 167 1.08E-43 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_23420 42ff2a940e8988538f479e0eb14a012d 300 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 169 295 7.5E-30 T 12-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 M634_23420 42ff2a940e8988538f479e0eb14a012d 300 SUPERFAMILY SSF48179 168 298 7.25E-40 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 M634_23420 42ff2a940e8988538f479e0eb14a012d 300 PIRSF PIRSF000103 1 300 9.9E-78 T 12-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 M634_23420 42ff2a940e8988538f479e0eb14a012d 300 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 12-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 M634_23420 42ff2a940e8988538f479e0eb14a012d 300 Gene3D G3DSA:1.10.1040.10 169 300 6.2E-43 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 M634_23420 42ff2a940e8988538f479e0eb14a012d 300 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 166 1.3E-50 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 M634_23420 42ff2a940e8988538f479e0eb14a012d 300 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 297 1.2E-119 T 12-10-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 M634_07610 f3e03b01c5ceb5387f3202aae2b8b109 431 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 423 1.6E-167 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 M634_07610 f3e03b01c5ceb5387f3202aae2b8b109 431 Gene3D G3DSA:3.40.50.1980 30 229 8.4E-127 T 12-10-2018 M634_07610 f3e03b01c5ceb5387f3202aae2b8b109 431 PRINTS PR00083 Histidinol dehydrogenase signature 227 248 2.6E-102 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 M634_07610 f3e03b01c5ceb5387f3202aae2b8b109 431 PRINTS PR00083 Histidinol dehydrogenase signature 165 191 2.6E-102 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 M634_07610 f3e03b01c5ceb5387f3202aae2b8b109 431 PRINTS PR00083 Histidinol dehydrogenase signature 134 160 2.6E-102 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 M634_07610 f3e03b01c5ceb5387f3202aae2b8b109 431 PRINTS PR00083 Histidinol dehydrogenase signature 358 376 2.6E-102 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 M634_07610 f3e03b01c5ceb5387f3202aae2b8b109 431 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 2.6E-102 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 M634_07610 f3e03b01c5ceb5387f3202aae2b8b109 431 PRINTS PR00083 Histidinol dehydrogenase signature 195 220 2.6E-102 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 M634_07610 f3e03b01c5ceb5387f3202aae2b8b109 431 PRINTS PR00083 Histidinol dehydrogenase signature 317 342 2.6E-102 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 M634_07610 f3e03b01c5ceb5387f3202aae2b8b109 431 PRINTS PR00083 Histidinol dehydrogenase signature 249 268 2.6E-102 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 M634_07610 f3e03b01c5ceb5387f3202aae2b8b109 431 SUPERFAMILY SSF53720 4 424 2.35E-91 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 M634_07610 f3e03b01c5ceb5387f3202aae2b8b109 431 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 424 42.482 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 M634_07610 f3e03b01c5ceb5387f3202aae2b8b109 431 Pfam PF00815 Histidinol dehydrogenase 27 424 6.7E-172 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 M634_07610 f3e03b01c5ceb5387f3202aae2b8b109 431 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 227 259 - T 12-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 M634_07610 f3e03b01c5ceb5387f3202aae2b8b109 431 PIRSF PIRSF000099 1 427 5.6E-171 T 12-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 M634_07610 f3e03b01c5ceb5387f3202aae2b8b109 431 Gene3D G3DSA:3.40.50.1980 231 346 8.4E-127 T 12-10-2018 M634_12205 e517e309abce115a18a8501132ec94b8 377 Gene3D G3DSA:1.10.287.470 90 176 8.8E-54 T 12-10-2018 M634_12205 e517e309abce115a18a8501132ec94b8 377 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 35 368 1.8E-35 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 M634_12205 e517e309abce115a18a8501132ec94b8 377 Gene3D G3DSA:2.40.420.20 40 367 8.8E-54 T 12-10-2018 M634_12205 e517e309abce115a18a8501132ec94b8 377 SUPERFAMILY SSF111369 49 254 2.62E-15 T 12-10-2018 M634_12205 e517e309abce115a18a8501132ec94b8 377 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 256 1.1E-16 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M634_12205 e517e309abce115a18a8501132ec94b8 377 Gene3D G3DSA:2.40.50.100 56 216 8.8E-54 T 12-10-2018 M634_12205 e517e309abce115a18a8501132ec94b8 377 Gene3D G3DSA:2.40.30.170 45 307 8.8E-54 T 12-10-2018 M634_05935 38822fe095ab069dcd2afb9ce2259b3b 397 SUPERFAMILY SSF64518 3 397 2.48E-67 T 12-10-2018 M634_05935 38822fe095ab069dcd2afb9ce2259b3b 397 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 2.1E-12 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 M634_05935 38822fe095ab069dcd2afb9ce2259b3b 397 Gene3D G3DSA:1.20.1330.10 268 372 7.5E-10 T 12-10-2018 M634_05935 38822fe095ab069dcd2afb9ce2259b3b 397 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 4 397 1.5E-93 T 12-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 M634_05935 38822fe095ab069dcd2afb9ce2259b3b 397 Gene3D G3DSA:1.20.1330.10 42 232 5.2E-33 T 12-10-2018 M634_19575 d4fe84669b9c45eab67ce3335e69a384 116 Gene3D G3DSA:3.40.250.10 24 116 4.7E-26 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M634_19575 d4fe84669b9c45eab67ce3335e69a384 116 SUPERFAMILY SSF52821 27 111 1.44E-25 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M634_19575 d4fe84669b9c45eab67ce3335e69a384 116 Pfam PF00581 Rhodanese-like domain 29 114 2.7E-15 T 12-10-2018 IPR001763 Rhodanese-like domain M634_19575 d4fe84669b9c45eab67ce3335e69a384 116 SMART SM00450 25 116 1.3E-19 T 12-10-2018 IPR001763 Rhodanese-like domain M634_18105 80dc7041f81175a065c90deb5614a04c 463 Gene3D G3DSA:2.40.30.170 320 446 1.3E-10 T 12-10-2018 M634_18105 80dc7041f81175a065c90deb5614a04c 463 SUPERFAMILY SSF56954 172 260 3.4E-5 T 12-10-2018 M634_18105 80dc7041f81175a065c90deb5614a04c 463 Gene3D G3DSA:1.10.287.470 105 136 1.3E-7 T 12-10-2018 M634_18105 80dc7041f81175a065c90deb5614a04c 463 SUPERFAMILY SSF111369 64 131 1.57E-6 T 12-10-2018 M634_18105 80dc7041f81175a065c90deb5614a04c 463 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 31 463 2.2E-134 T 12-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 M634_18105 80dc7041f81175a065c90deb5614a04c 463 ProSitePatterns PS00543 HlyD family secretion proteins signature. 428 450 - T 12-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 M634_18105 80dc7041f81175a065c90deb5614a04c 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 428 443 8.1E-49 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 M634_18105 80dc7041f81175a065c90deb5614a04c 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 443 463 8.1E-49 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 M634_18105 80dc7041f81175a065c90deb5614a04c 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 40 63 8.1E-49 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 M634_18105 80dc7041f81175a065c90deb5614a04c 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 329 350 8.1E-49 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 M634_18105 80dc7041f81175a065c90deb5614a04c 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 386 409 8.1E-49 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 M634_18105 80dc7041f81175a065c90deb5614a04c 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 82 102 8.1E-49 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 M634_18105 80dc7041f81175a065c90deb5614a04c 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 362 386 8.1E-49 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 M634_18105 80dc7041f81175a065c90deb5614a04c 463 Gene3D G3DSA:1.20.1600.10 172 259 2.2E-6 T 12-10-2018 M634_18105 80dc7041f81175a065c90deb5614a04c 463 Pfam PF13533 Biotin-lipoyl like 75 108 4.0E-7 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain M634_18105 80dc7041f81175a065c90deb5614a04c 463 Gene3D G3DSA:2.40.50.100 69 104 1.3E-7 T 12-10-2018 M634_18105 80dc7041f81175a065c90deb5614a04c 463 Pfam PF13437 HlyD family secretion protein 316 423 1.3E-17 T 12-10-2018 M634_10225 17ca4cb4a50bc88b59219201c5a0f831 458 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 441 1.2E-152 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M634_10225 17ca4cb4a50bc88b59219201c5a0f831 458 PRINTS PR00175 Sodium/alanine symporter signature 412 432 4.4E-52 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M634_10225 17ca4cb4a50bc88b59219201c5a0f831 458 PRINTS PR00175 Sodium/alanine symporter signature 184 202 4.4E-52 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M634_10225 17ca4cb4a50bc88b59219201c5a0f831 458 PRINTS PR00175 Sodium/alanine symporter signature 212 231 4.4E-52 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M634_10225 17ca4cb4a50bc88b59219201c5a0f831 458 PRINTS PR00175 Sodium/alanine symporter signature 92 114 4.4E-52 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M634_10225 17ca4cb4a50bc88b59219201c5a0f831 458 PRINTS PR00175 Sodium/alanine symporter signature 307 325 4.4E-52 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M634_10225 17ca4cb4a50bc88b59219201c5a0f831 458 PRINTS PR00175 Sodium/alanine symporter signature 353 375 4.4E-52 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M634_10225 17ca4cb4a50bc88b59219201c5a0f831 458 Pfam PF01235 Sodium:alanine symporter family 54 445 1.2E-137 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M634_10225 17ca4cb4a50bc88b59219201c5a0f831 458 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 92 107 - T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M634_21260 bd38c647da985ee86773356bea888378 515 Gene3D G3DSA:3.40.720.10 31 397 9.2E-101 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 M634_21260 bd38c647da985ee86773356bea888378 515 Gene3D G3DSA:3.30.1120.10 398 462 9.2E-101 T 12-10-2018 M634_21260 bd38c647da985ee86773356bea888378 515 Pfam PF00884 Sulfatase 31 356 1.1E-61 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 M634_21260 bd38c647da985ee86773356bea888378 515 SUPERFAMILY SSF53649 27 507 2.47E-126 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 M634_21260 bd38c647da985ee86773356bea888378 515 Pfam PF14707 C-terminal region of aryl-sulfatase 396 470 1.3E-7 T 12-10-2018 M634_04605 dc327df94aa9b53c659730fc6de4537c 357 Gene3D G3DSA:3.20.20.70 3 348 9.0E-158 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_04605 dc327df94aa9b53c659730fc6de4537c 357 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 10 346 2.3E-163 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 M634_04605 dc327df94aa9b53c659730fc6de4537c 357 SUPERFAMILY SSF51569 8 345 8.33E-139 T 12-10-2018 M634_04605 dc327df94aa9b53c659730fc6de4537c 357 PIRSF PIRSF001361 1 354 2.0E-164 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 M634_04605 dc327df94aa9b53c659730fc6de4537c 357 Pfam PF00793 DAHP synthetase I family 41 340 2.8E-105 T 12-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 M634_12250 f9f75b28c9eff0cbd3a853377c0a5ebc 611 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 499 609 1.1E-12 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_12250 f9f75b28c9eff0cbd3a853377c0a5ebc 611 SUPERFAMILY SSF55874 445 609 4.32E-28 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_12250 f9f75b28c9eff0cbd3a853377c0a5ebc 611 SMART SM00388 387 456 2.1E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_12250 f9f75b28c9eff0cbd3a853377c0a5ebc 611 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 55 295 2.1E-35 T 12-10-2018 M634_12250 f9f75b28c9eff0cbd3a853377c0a5ebc 611 Gene3D G3DSA:1.10.287.130 393 453 7.3E-18 T 12-10-2018 M634_12250 f9f75b28c9eff0cbd3a853377c0a5ebc 611 Gene3D G3DSA:3.40.190.10 137 246 7.9E-16 T 12-10-2018 M634_12250 f9f75b28c9eff0cbd3a853377c0a5ebc 611 Gene3D G3DSA:3.30.565.10 457 611 6.8E-27 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_12250 f9f75b28c9eff0cbd3a853377c0a5ebc 611 PRINTS PR00344 Bacterial sensor protein C-terminal signature 545 559 7.2E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_12250 f9f75b28c9eff0cbd3a853377c0a5ebc 611 PRINTS PR00344 Bacterial sensor protein C-terminal signature 571 589 7.2E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_12250 f9f75b28c9eff0cbd3a853377c0a5ebc 611 SUPERFAMILY SSF47384 380 452 4.51E-9 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M634_12250 f9f75b28c9eff0cbd3a853377c0a5ebc 611 SUPERFAMILY SSF53850 66 291 1.98E-17 T 12-10-2018 M634_12250 f9f75b28c9eff0cbd3a853377c0a5ebc 611 Pfam PF00512 His Kinase A (phospho-acceptor) domain 393 452 4.1E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_12250 f9f75b28c9eff0cbd3a853377c0a5ebc 611 Gene3D G3DSA:3.40.190.10 52 252 7.9E-16 T 12-10-2018 M634_12250 f9f75b28c9eff0cbd3a853377c0a5ebc 611 SMART SM00387 498 611 2.6E-12 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_13655 f13bebab0cbb9185fe55b5f7de1f3416 469 Pfam PF00072 Response regulator receiver domain 6 115 3.2E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_13655 f13bebab0cbb9185fe55b5f7de1f3416 469 SMART SM00448 4 115 1.3E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_13655 f13bebab0cbb9185fe55b5f7de1f3416 469 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 215 230 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M634_13655 f13bebab0cbb9185fe55b5f7de1f3416 469 SMART SM00382 149 296 7.0E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_13655 f13bebab0cbb9185fe55b5f7de1f3416 469 SUPERFAMILY SSF46689 342 460 1.84E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_13655 f13bebab0cbb9185fe55b5f7de1f3416 469 Gene3D G3DSA:3.40.50.2300 1 119 3.4E-34 T 12-10-2018 M634_13655 f13bebab0cbb9185fe55b5f7de1f3416 469 Pfam PF00158 Sigma-54 interaction domain 134 295 1.1E-65 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 M634_13655 f13bebab0cbb9185fe55b5f7de1f3416 469 SUPERFAMILY SSF52540 135 370 4.81E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_13655 f13bebab0cbb9185fe55b5f7de1f3416 469 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 342 351 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site M634_13655 f13bebab0cbb9185fe55b5f7de1f3416 469 Gene3D G3DSA:1.10.10.60 401 466 3.1E-9 T 12-10-2018 M634_13655 f13bebab0cbb9185fe55b5f7de1f3416 469 Pfam PF02954 Bacterial regulatory protein, Fis family 420 459 6.3E-12 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M634_13655 f13bebab0cbb9185fe55b5f7de1f3416 469 Gene3D G3DSA:3.40.50.300 120 300 6.4E-65 T 12-10-2018 M634_13655 f13bebab0cbb9185fe55b5f7de1f3416 469 SUPERFAMILY SSF52172 3 173 2.42E-40 T 12-10-2018 IPR011006 CheY-like superfamily M634_13655 f13bebab0cbb9185fe55b5f7de1f3416 469 Gene3D G3DSA:1.10.8.60 301 379 9.7E-31 T 12-10-2018 M634_08345 fad2a17b79feb327df156e1991ad4192 792 Pfam PF03176 MMPL family 586 769 1.9E-15 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 M634_08345 fad2a17b79feb327df156e1991ad4192 792 Pfam PF03176 MMPL family 62 383 8.9E-22 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 M634_08345 fad2a17b79feb327df156e1991ad4192 792 Gene3D G3DSA:1.20.1640.10 587 777 3.9E-17 T 12-10-2018 M634_08345 fad2a17b79feb327df156e1991ad4192 792 SUPERFAMILY SSF82866 616 768 2.62E-33 T 12-10-2018 M634_08345 fad2a17b79feb327df156e1991ad4192 792 Gene3D G3DSA:1.20.1640.10 184 399 1.1E-10 T 12-10-2018 M634_08345 fad2a17b79feb327df156e1991ad4192 792 SUPERFAMILY SSF82866 159 382 1.44E-30 T 12-10-2018 M634_24060 e0450b7491a5d302a53e4622259b0dad 263 Gene3D G3DSA:3.10.310.10 119 251 9.9E-84 T 12-10-2018 M634_24060 e0450b7491a5d302a53e4622259b0dad 263 Gene3D G3DSA:3.10.310.10 6 259 9.9E-84 T 12-10-2018 M634_24060 e0450b7491a5d302a53e4622259b0dad 263 Pfam PF02567 Phenazine biosynthesis-like protein 8 259 5.8E-57 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 M634_24060 e0450b7491a5d302a53e4622259b0dad 263 PIRSF PIRSF016184 1 263 1.2E-49 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 M634_24060 e0450b7491a5d302a53e4622259b0dad 263 SUPERFAMILY SSF54506 1 263 8.93E-77 T 12-10-2018 M634_24060 e0450b7491a5d302a53e4622259b0dad 263 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 260 2.9E-33 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 M634_12340 bce0b793b3c3290714a7577bcad9e3bc 93 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 92 2.8E-49 T 12-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 M634_12340 bce0b793b3c3290714a7577bcad9e3bc 93 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 93 30.541 T 12-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 M634_12340 bce0b793b3c3290714a7577bcad9e3bc 93 SUPERFAMILY SSF47729 1 91 2.5E-30 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 M634_12340 bce0b793b3c3290714a7577bcad9e3bc 93 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 M634_12340 bce0b793b3c3290714a7577bcad9e3bc 93 SMART SM00411 1 91 4.4E-43 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 M634_12340 bce0b793b3c3290714a7577bcad9e3bc 93 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.2E-18 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 M634_12340 bce0b793b3c3290714a7577bcad9e3bc 93 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.2E-18 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 M634_12340 bce0b793b3c3290714a7577bcad9e3bc 93 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.2E-18 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 M634_12340 bce0b793b3c3290714a7577bcad9e3bc 93 Gene3D G3DSA:4.10.520.10 40 92 4.4E-29 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 M634_12340 bce0b793b3c3290714a7577bcad9e3bc 93 Gene3D G3DSA:4.10.520.10 2 39 5.3E-12 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 M634_12340 bce0b793b3c3290714a7577bcad9e3bc 93 Pfam PF00216 Bacterial DNA-binding protein 1 91 5.9E-31 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 M634_12170 6c99bd70ebe165a6be7ceee5cfff7735 324 PIRSF PIRSF034367 1 324 1.0E-198 T 12-10-2018 IPR015004 Protein of unknown function DUF1852 M634_12170 6c99bd70ebe165a6be7ceee5cfff7735 324 Pfam PF08908 Domain of unknown function (DUF1852) 1 321 3.2E-185 T 12-10-2018 IPR015004 Protein of unknown function DUF1852 M634_04020 4803098475b090c0d40b3dbcd8ce64ca 272 Gene3D G3DSA:1.10.287.70 137 188 1.0E-14 T 12-10-2018 M634_04020 4803098475b090c0d40b3dbcd8ce64ca 272 Gene3D G3DSA:1.20.120.350 24 136 2.2E-14 T 12-10-2018 IPR027359 Voltage-dependent channel domain superfamily M634_04020 4803098475b090c0d40b3dbcd8ce64ca 272 Pfam PF07885 Ion channel 146 225 1.3E-14 T 12-10-2018 IPR013099 Potassium channel domain M634_04020 4803098475b090c0d40b3dbcd8ce64ca 272 Gene3D G3DSA:1.20.5.110 190 232 9.9E-9 T 12-10-2018 M634_04020 4803098475b090c0d40b3dbcd8ce64ca 272 PRINTS PR00169 Potassium channel signature 107 133 8.2E-6 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 M634_04020 4803098475b090c0d40b3dbcd8ce64ca 272 PRINTS PR00169 Potassium channel signature 169 191 8.2E-6 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 M634_04020 4803098475b090c0d40b3dbcd8ce64ca 272 PRINTS PR00169 Potassium channel signature 198 224 8.2E-6 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 M634_04020 4803098475b090c0d40b3dbcd8ce64ca 272 SUPERFAMILY SSF81324 26 225 2.57E-45 T 12-10-2018 M634_17745 1b17c8d5e3be4439687461b0665027db 307 Gene3D G3DSA:3.40.50.1980 139 307 5.3E-46 T 12-10-2018 M634_17745 1b17c8d5e3be4439687461b0665027db 307 SUPERFAMILY SSF53807 31 291 9.42E-57 T 12-10-2018 M634_17745 1b17c8d5e3be4439687461b0665027db 307 Pfam PF01497 Periplasmic binding protein 52 281 9.1E-29 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain M634_17745 1b17c8d5e3be4439687461b0665027db 307 Gene3D G3DSA:3.40.50.1980 28 137 6.8E-29 T 12-10-2018 M634_08275 4ba17bdd54f3389ba106c2d7f301971b 511 Gene3D G3DSA:1.20.200.10 198 509 1.2E-122 T 12-10-2018 M634_08275 4ba17bdd54f3389ba106c2d7f301971b 511 SUPERFAMILY SSF48557 4 506 1.41E-192 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 M634_08275 4ba17bdd54f3389ba106c2d7f301971b 511 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 12-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 M634_08275 4ba17bdd54f3389ba106c2d7f301971b 511 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 504 44.27 T 12-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 M634_08275 4ba17bdd54f3389ba106c2d7f301971b 511 Pfam PF00221 Aromatic amino acid lyase 12 470 3.5E-188 T 12-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 M634_08275 4ba17bdd54f3389ba106c2d7f301971b 511 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 5 503 7.9E-215 T 12-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 M634_08275 4ba17bdd54f3389ba106c2d7f301971b 511 Gene3D G3DSA:1.10.275.10 2 197 2.3E-70 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal M634_03605 ef99383015c803bec86cced4a5668eac 311 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 57.449 T 12-10-2018 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 M634_03605 ef99383015c803bec86cced4a5668eac 311 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 309 1.9E-50 T 12-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 M634_03605 ef99383015c803bec86cced4a5668eac 311 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 1.7E-47 T 12-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 M634_03605 ef99383015c803bec86cced4a5668eac 311 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 12-10-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 M634_03605 ef99383015c803bec86cced4a5668eac 311 PIRSF PIRSF000102 1 307 1.1E-62 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 M634_03605 ef99383015c803bec86cced4a5668eac 311 SUPERFAMILY SSF51735 1 145 5.57E-40 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_03605 ef99383015c803bec86cced4a5668eac 311 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 310 9.7E-130 T 12-10-2018 IPR010097 Malate dehydrogenase, type 1 GO:0006099|GO:0030060 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 M634_03605 ef99383015c803bec86cced4a5668eac 311 Gene3D G3DSA:3.40.50.720 1 146 6.6E-66 T 12-10-2018 M634_03605 ef99383015c803bec86cced4a5668eac 311 Gene3D G3DSA:3.90.110.10 147 311 1.5E-55 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 M634_03605 ef99383015c803bec86cced4a5668eac 311 SUPERFAMILY SSF56327 147 309 5.71E-44 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 M634_09015 bc09b5815a3ee8dad41ae017492ac5b6 433 Gene3D G3DSA:3.30.70.1770 296 357 5.0E-8 T 12-10-2018 M634_09015 bc09b5815a3ee8dad41ae017492ac5b6 433 TIGRFAM TIGR02500 type_III_yscD: type III secretion apparatus protein, YscD/HrpQ family 4 422 5.2E-129 T 12-10-2018 IPR012843 Type III secretion system YscD/HrpQ M634_09015 bc09b5815a3ee8dad41ae017492ac5b6 433 Gene3D G3DSA:2.60.200.20 1 121 1.1E-12 T 12-10-2018 M634_09015 bc09b5815a3ee8dad41ae017492ac5b6 433 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 7 98 7.3E-20 T 12-10-2018 IPR032030 YscD, cytoplasmic domain M634_09015 bc09b5815a3ee8dad41ae017492ac5b6 433 Pfam PF16693 Inner membrane component of T3SS, periplasmic domain 170 422 8.9E-128 T 12-10-2018 IPR032034 Yop protein translocation protein D, periplasmic domain M634_23435 85623e8ec92c9f5c2d85e2c0d6068fef 384 SUPERFAMILY SSF56645 1 237 1.7E-79 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 M634_23435 85623e8ec92c9f5c2d85e2c0d6068fef 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 4.6E-28 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 M634_23435 85623e8ec92c9f5c2d85e2c0d6068fef 384 SUPERFAMILY SSF47203 225 379 1.32E-59 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 M634_23435 85623e8ec92c9f5c2d85e2c0d6068fef 384 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 M634_23435 85623e8ec92c9f5c2d85e2c0d6068fef 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 1.1E-25 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 M634_23435 85623e8ec92c9f5c2d85e2c0d6068fef 384 PIRSF PIRSF016578 4 193 7.2E-12 T 12-10-2018 M634_23435 85623e8ec92c9f5c2d85e2c0d6068fef 384 PIRSF PIRSF016578 206 381 7.0E-14 T 12-10-2018 M634_23435 85623e8ec92c9f5c2d85e2c0d6068fef 384 Gene3D G3DSA:2.40.110.10 121 232 1.7E-41 T 12-10-2018 M634_23435 85623e8ec92c9f5c2d85e2c0d6068fef 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 M634_23435 85623e8ec92c9f5c2d85e2c0d6068fef 384 Gene3D G3DSA:1.10.540.10 1 117 2.2E-35 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 M634_23435 85623e8ec92c9f5c2d85e2c0d6068fef 384 Gene3D G3DSA:1.20.140.10 233 379 1.7E-55 T 12-10-2018 M634_23435 85623e8ec92c9f5c2d85e2c0d6068fef 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 377 1.4E-50 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 M634_04035 4e55eba1604f3cdef1e2dc4b0850db8b 476 Pfam PF01467 Cytidylyltransferase-like 345 468 1.1E-14 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 M634_04035 4e55eba1604f3cdef1e2dc4b0850db8b 476 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 M634_04035 4e55eba1604f3cdef1e2dc4b0850db8b 476 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 6.1E-18 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 M634_04035 4e55eba1604f3cdef1e2dc4b0850db8b 476 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 472 3.1E-61 T 12-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 M634_04035 4e55eba1604f3cdef1e2dc4b0850db8b 476 Pfam PF00294 pfkB family carbohydrate kinase 13 303 3.1E-47 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB M634_04035 4e55eba1604f3cdef1e2dc4b0850db8b 476 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 7 312 5.2E-127 T 12-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 M634_04035 4e55eba1604f3cdef1e2dc4b0850db8b 476 Gene3D G3DSA:3.40.50.620 321 474 4.9E-37 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M634_04035 4e55eba1604f3cdef1e2dc4b0850db8b 476 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 42.991 T 12-10-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 M634_04035 4e55eba1604f3cdef1e2dc4b0850db8b 476 SUPERFAMILY SSF53613 12 302 2.65E-60 T 12-10-2018 IPR029056 Ribokinase-like M634_04035 4e55eba1604f3cdef1e2dc4b0850db8b 476 SUPERFAMILY SSF52374 340 471 3.66E-23 T 12-10-2018 M634_04035 4e55eba1604f3cdef1e2dc4b0850db8b 476 Gene3D G3DSA:3.40.1190.20 6 310 5.5E-113 T 12-10-2018 IPR029056 Ribokinase-like M634_18180 cb7cedae2522e8620d0866d82ae2b4e2 219 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 127 155 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 M634_18180 cb7cedae2522e8620d0866d82ae2b4e2 219 SUPERFAMILY SSF51161 65 213 8.32E-38 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily M634_18180 cb7cedae2522e8620d0866d82ae2b4e2 219 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 153 1.2E-9 T 12-10-2018 IPR001451 Hexapeptide repeat M634_18180 cb7cedae2522e8620d0866d82ae2b4e2 219 Gene3D G3DSA:2.160.10.10 1 218 2.8E-63 T 12-10-2018 M634_12535 2a4e989354cda5a2f53c15715bc70d3f 213 Gene3D G3DSA:3.40.50.300 3 213 1.5E-60 T 12-10-2018 M634_12535 2a4e989354cda5a2f53c15715bc70d3f 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 9 198 1.3E-41 T 12-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 M634_12535 2a4e989354cda5a2f53c15715bc70d3f 213 TIGRFAM TIGR00235 udk: uridine kinase 3 211 6.2E-90 T 12-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 M634_12535 2a4e989354cda5a2f53c15715bc70d3f 213 Hamap MF_00551 Uridine kinase [udk]. 4 212 39.464 T 12-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 M634_12535 2a4e989354cda5a2f53c15715bc70d3f 213 PRINTS PR00988 Uridine kinase signature 178 191 2.5E-36 T 12-10-2018 M634_12535 2a4e989354cda5a2f53c15715bc70d3f 213 PRINTS PR00988 Uridine kinase signature 156 167 2.5E-36 T 12-10-2018 M634_12535 2a4e989354cda5a2f53c15715bc70d3f 213 PRINTS PR00988 Uridine kinase signature 142 152 2.5E-36 T 12-10-2018 M634_12535 2a4e989354cda5a2f53c15715bc70d3f 213 PRINTS PR00988 Uridine kinase signature 41 52 2.5E-36 T 12-10-2018 M634_12535 2a4e989354cda5a2f53c15715bc70d3f 213 PRINTS PR00988 Uridine kinase signature 7 24 2.5E-36 T 12-10-2018 M634_12535 2a4e989354cda5a2f53c15715bc70d3f 213 PRINTS PR00988 Uridine kinase signature 86 101 2.5E-36 T 12-10-2018 M634_12535 2a4e989354cda5a2f53c15715bc70d3f 213 SUPERFAMILY SSF52540 6 204 1.31E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_12650 a65d8c0bd160ff0b7a96a8aa0d139647 567 Gene3D G3DSA:3.90.76.10 97 220 8.4E-194 T 12-10-2018 M634_12650 a65d8c0bd160ff0b7a96a8aa0d139647 567 Gene3D G3DSA:3.10.105.10 322 537 8.4E-194 T 12-10-2018 M634_12650 a65d8c0bd160ff0b7a96a8aa0d139647 567 Gene3D G3DSA:3.40.190.10 67 549 8.4E-194 T 12-10-2018 M634_12650 a65d8c0bd160ff0b7a96a8aa0d139647 567 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 113 134 - T 12-10-2018 IPR023765 Solute-binding protein family 5, conserved site M634_12650 a65d8c0bd160ff0b7a96a8aa0d139647 567 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 109 487 8.2E-95 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain M634_12650 a65d8c0bd160ff0b7a96a8aa0d139647 567 PIRSF PIRSF002741 13 567 6.7E-118 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 M634_12650 a65d8c0bd160ff0b7a96a8aa0d139647 567 SUPERFAMILY SSF53850 65 555 4.71E-149 T 12-10-2018 M634_18845 f64f284ddd6489151dca14a0755c6489 697 Gene3D G3DSA:2.170.130.10 35 160 3.1E-30 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily M634_18845 f64f284ddd6489151dca14a0755c6489 697 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 150 1.5E-16 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain M634_18845 f64f284ddd6489151dca14a0755c6489 697 Gene3D G3DSA:2.40.170.20 161 697 2.1E-98 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily M634_18845 f64f284ddd6489151dca14a0755c6489 697 Pfam PF00593 TonB dependent receptor 241 696 8.5E-51 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel M634_18845 f64f284ddd6489151dca14a0755c6489 697 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 55 696 6.7E-91 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 M634_18845 f64f284ddd6489151dca14a0755c6489 697 SUPERFAMILY SSF56935 22 697 1.83E-117 T 12-10-2018 M634_21675 51c2be9febbf5a243396858d9925bd8b 324 SUPERFAMILY SSF52172 193 320 7.12E-29 T 12-10-2018 IPR011006 CheY-like superfamily M634_21675 51c2be9febbf5a243396858d9925bd8b 324 Gene3D G3DSA:2.40.50.180 44 160 4.2E-30 T 12-10-2018 M634_21675 51c2be9febbf5a243396858d9925bd8b 324 Gene3D G3DSA:2.30.30.40 36 154 4.2E-30 T 12-10-2018 M634_21675 51c2be9febbf5a243396858d9925bd8b 324 SMART SM00448 193 318 6.1E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_21675 51c2be9febbf5a243396858d9925bd8b 324 Pfam PF00072 Response regulator receiver domain 195 316 7.2E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_21675 51c2be9febbf5a243396858d9925bd8b 324 SUPERFAMILY SSF50341 7 165 1.57E-33 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 M634_21675 51c2be9febbf5a243396858d9925bd8b 324 Gene3D G3DSA:3.40.50.2300 180 322 1.8E-29 T 12-10-2018 M634_21675 51c2be9febbf5a243396858d9925bd8b 324 PIRSF PIRSF002867 1 324 1.0E-102 T 12-10-2018 IPR024181 Chemotaxis response regulator CheV M634_21675 51c2be9febbf5a243396858d9925bd8b 324 SMART SM00260 14 160 7.6E-26 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 M634_21675 51c2be9febbf5a243396858d9925bd8b 324 Pfam PF01584 CheW-like domain 35 162 1.9E-30 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 M634_03315 abc0a95d3b1f5f1fd7223b93a4e566e9 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 37.508 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03315 abc0a95d3b1f5f1fd7223b93a4e566e9 136 Gene3D G3DSA:3.90.1170.10 1 136 4.7E-54 T 12-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 M634_03315 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 3.4E-40 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03315 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 3.4E-40 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03315 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 3.4E-40 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03315 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 3.4E-40 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03315 abc0a95d3b1f5f1fd7223b93a4e566e9 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 12-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_03315 abc0a95d3b1f5f1fd7223b93a4e566e9 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 125 4.7E-57 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03315 abc0a95d3b1f5f1fd7223b93a4e566e9 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 8.8E-47 T 12-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 M634_03315 abc0a95d3b1f5f1fd7223b93a4e566e9 136 SUPERFAMILY SSF54686 3 133 4.19E-53 T 12-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 M634_05840 603a969c42c4a251fed996dcdf9b1a81 377 Gene3D G3DSA:2.40.10.410 291 377 8.5E-38 T 12-10-2018 IPR038165 FlgT, C-terminal domain superfamily M634_05840 603a969c42c4a251fed996dcdf9b1a81 377 Gene3D G3DSA:3.30.1660.40 24 113 1.3E-36 T 12-10-2018 IPR038180 FlgT, N-terminal domain superfamily M634_05840 603a969c42c4a251fed996dcdf9b1a81 377 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 24 110 1.4E-26 T 12-10-2018 IPR032370 Flagellar assembly protein T, N-terminal M634_05840 603a969c42c4a251fed996dcdf9b1a81 377 Gene3D G3DSA:3.40.50.10610 114 290 4.4E-58 T 12-10-2018 M634_05840 603a969c42c4a251fed996dcdf9b1a81 377 Pfam PF16539 Flagellar assembly protein T, middle domain 115 256 3.7E-42 T 12-10-2018 IPR032386 Flagellar assembly protein T, middle domain M634_05840 603a969c42c4a251fed996dcdf9b1a81 377 Pfam PF16538 Flagellar assembly protein T, C-terminal domain 299 374 1.2E-27 T 12-10-2018 IPR032388 Flagellar assembly protein T, C-terminal M634_14230 0e524849c039f048d52caf2f7073a93f 367 Gene3D G3DSA:2.40.240.50 119 257 2.2E-133 T 12-10-2018 M634_14230 0e524849c039f048d52caf2f7073a93f 367 SMART SM00925 119 252 5.3E-66 T 12-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 M634_14230 0e524849c039f048d52caf2f7073a93f 367 SUPERFAMILY SSF50685 22 350 5.23E-101 T 12-10-2018 IPR036908 RlpA-like domain superfamily M634_14230 0e524849c039f048d52caf2f7073a93f 367 Gene3D G3DSA:2.40.40.10 51 348 2.2E-133 T 12-10-2018 IPR036908 RlpA-like domain superfamily M634_14230 0e524849c039f048d52caf2f7073a93f 367 Pfam PF03562 MltA specific insert domain 145 251 2.0E-31 T 12-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 M634_14230 0e524849c039f048d52caf2f7073a93f 367 Pfam PF06725 3D domain 272 348 5.2E-21 T 12-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 M634_19380 7889e6ba84b5f4caa74014949dc730bf 302 SUPERFAMILY SSF103481 203 298 5.1E-7 T 12-10-2018 M634_19380 7889e6ba84b5f4caa74014949dc730bf 302 SUPERFAMILY SSF103481 49 139 2.88E-6 T 12-10-2018 M634_19380 7889e6ba84b5f4caa74014949dc730bf 302 TIGRFAM TIGR03340 phn_DUF6: phosphonate utilization associated putative membrane protein 4 297 1.2E-99 T 12-10-2018 IPR017725 Phosphonate utilization associated transmembrane protein, putative M634_19380 7889e6ba84b5f4caa74014949dc730bf 302 Pfam PF00892 EamA-like transporter family 152 298 3.8E-6 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M634_23870 3eb162fc258d3e262d13838b07c928c4 140 Gene3D G3DSA:3.40.630.30 35 138 7.6E-25 T 12-10-2018 M634_23870 3eb162fc258d3e262d13838b07c928c4 140 SUPERFAMILY SSF55729 11 137 9.14E-24 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_23870 3eb162fc258d3e262d13838b07c928c4 140 Pfam PF00583 Acetyltransferase (GNAT) family 35 115 1.6E-12 T 12-10-2018 IPR000182 GNAT domain M634_05440 aeacf76cc294c13f0711566bf49b010a 269 PIRSF PIRSF002854 1 269 7.4E-99 T 12-10-2018 IPR004872 Lipoprotein NlpA family M634_05440 aeacf76cc294c13f0711566bf49b010a 269 SUPERFAMILY SSF53850 32 269 3.49E-78 T 12-10-2018 M634_05440 aeacf76cc294c13f0711566bf49b010a 269 Gene3D G3DSA:3.40.190.10 34 263 1.4E-93 T 12-10-2018 M634_05440 aeacf76cc294c13f0711566bf49b010a 269 Gene3D G3DSA:3.40.190.10 115 219 1.4E-93 T 12-10-2018 M634_05440 aeacf76cc294c13f0711566bf49b010a 269 Pfam PF03180 NLPA lipoprotein 33 269 7.1E-98 T 12-10-2018 IPR004872 Lipoprotein NlpA family M634_05440 aeacf76cc294c13f0711566bf49b010a 269 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 15 269 1.0E-126 T 12-10-2018 IPR004872 Lipoprotein NlpA family M634_09395 64ce2784ad07c75b6d9f4277eb69d1e6 277 Pfam PF13509 S1 domain 71 132 6.9E-5 T 12-10-2018 IPR039566 Conserved virulence factor B, S1 domain M634_09395 64ce2784ad07c75b6d9f4277eb69d1e6 277 Pfam PF13509 S1 domain 4 63 9.9E-24 T 12-10-2018 IPR039566 Conserved virulence factor B, S1 domain M634_09395 64ce2784ad07c75b6d9f4277eb69d1e6 277 SMART SM00316 69 132 6.4 T 12-10-2018 IPR022967 RNA-binding domain, S1 M634_09395 64ce2784ad07c75b6d9f4277eb69d1e6 277 SMART SM00316 3 64 14.0 T 12-10-2018 IPR022967 RNA-binding domain, S1 M634_09395 64ce2784ad07c75b6d9f4277eb69d1e6 277 SMART SM00316 145 207 0.14 T 12-10-2018 IPR022967 RNA-binding domain, S1 M634_09395 64ce2784ad07c75b6d9f4277eb69d1e6 277 PIRSF PIRSF012524 1 277 2.0E-98 T 12-10-2018 IPR014464 Conserved virulence factor B M634_09395 64ce2784ad07c75b6d9f4277eb69d1e6 277 Gene3D G3DSA:1.10.10.10 215 277 1.6E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_19510 b44c736cfb9d37cc984d14706bb15516 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 148 243 3.6E-33 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G M634_19510 b44c736cfb9d37cc984d14706bb15516 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 3.7E-46 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G M634_19510 b44c736cfb9d37cc984d14706bb15516 261 SUPERFAMILY SSF117143 92 222 5.36E-37 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like M634_19510 b44c736cfb9d37cc984d14706bb15516 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 258 2.2E-27 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain M634_19510 b44c736cfb9d37cc984d14706bb15516 261 Pfam PF00460 Flagella basal body rod protein 5 35 4.6E-11 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 M634_19510 b44c736cfb9d37cc984d14706bb15516 261 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site M634_19510 b44c736cfb9d37cc984d14706bb15516 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 6.3E-119 T 12-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 M634_05565 30ebe8758d86121f5169b7949b9eb5e9 154 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 147 24.635 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 M634_05565 30ebe8758d86121f5169b7949b9eb5e9 154 Pfam PF02130 Uncharacterized protein family UPF0054 20 142 1.2E-38 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 M634_05565 30ebe8758d86121f5169b7949b9eb5e9 154 SUPERFAMILY SSF55486 3 150 1.54E-49 T 12-10-2018 M634_05565 30ebe8758d86121f5169b7949b9eb5e9 154 Gene3D G3DSA:3.40.390.30 1 154 7.8E-60 T 12-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 M634_05565 30ebe8758d86121f5169b7949b9eb5e9 154 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 113 123 - T 12-10-2018 IPR020549 Endoribonuclease YbeY, conserved site M634_05565 30ebe8758d86121f5169b7949b9eb5e9 154 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 39 143 1.0E-37 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 M634_17090 1592027455d20bccd5e9e6b8d9cfde31 150 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 12 84 2.2E-7 T 12-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like M634_17090 1592027455d20bccd5e9e6b8d9cfde31 150 Gene3D G3DSA:3.30.530.20 1 150 2.5E-19 T 12-10-2018 IPR023393 START-like domain superfamily M634_17090 1592027455d20bccd5e9e6b8d9cfde31 150 SUPERFAMILY SSF55961 2 146 1.74E-20 T 12-10-2018 M634_10460 49859e7848275f947ed8a02fbb9d8a77 389 Gene3D G3DSA:3.40.1090.10 62 189 2.4E-16 T 12-10-2018 M634_10460 49859e7848275f947ed8a02fbb9d8a77 389 Pfam PF01734 Patatin-like phospholipase 80 265 1.2E-17 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 M634_10460 49859e7848275f947ed8a02fbb9d8a77 389 SUPERFAMILY SSF52151 77 306 1.26E-33 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase M634_03495 750fc788cced2d2dd52c85ab465a7e46 242 Gene3D G3DSA:3.40.50.300 6 237 1.9E-53 T 12-10-2018 M634_03495 750fc788cced2d2dd52c85ab465a7e46 242 Pfam PF00005 ABC transporter 30 185 1.0E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_03495 750fc788cced2d2dd52c85ab465a7e46 242 SMART SM00382 35 233 3.1E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_03495 750fc788cced2d2dd52c85ab465a7e46 242 SUPERFAMILY SSF52540 8 229 2.1E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_17975 956602f9af03ddbdeecacbd846ca5fea 487 Gene3D G3DSA:1.10.1040.10 282 487 1.3E-73 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 M634_17975 956602f9af03ddbdeecacbd846ca5fea 487 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 26 188 4.0E-51 T 12-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 M634_17975 956602f9af03ddbdeecacbd846ca5fea 487 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 217 462 7.3E-90 T 12-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 M634_17975 956602f9af03ddbdeecacbd846ca5fea 487 SUPERFAMILY SSF51735 4 281 1.93E-99 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_17975 956602f9af03ddbdeecacbd846ca5fea 487 PRINTS PR00084 Mannitol dehydrogenase signature 248 263 5.2E-21 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 M634_17975 956602f9af03ddbdeecacbd846ca5fea 487 PRINTS PR00084 Mannitol dehydrogenase signature 27 37 5.2E-21 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 M634_17975 956602f9af03ddbdeecacbd846ca5fea 487 PRINTS PR00084 Mannitol dehydrogenase signature 179 192 5.2E-21 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 M634_17975 956602f9af03ddbdeecacbd846ca5fea 487 PRINTS PR00084 Mannitol dehydrogenase signature 218 231 5.2E-21 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 M634_17975 956602f9af03ddbdeecacbd846ca5fea 487 SUPERFAMILY SSF48179 283 486 3.16E-64 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 M634_17975 956602f9af03ddbdeecacbd846ca5fea 487 Gene3D G3DSA:3.40.50.720 7 281 1.4E-110 T 12-10-2018 M634_17975 956602f9af03ddbdeecacbd846ca5fea 487 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 218 230 - T 12-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 M634_18830 6f609ef6673bd56f9670e4413ee2d662 317 Gene3D G3DSA:3.40.50.720 1 144 3.3E-41 T 12-10-2018 M634_18830 6f609ef6673bd56f9670e4413ee2d662 317 Gene3D G3DSA:3.90.110.10 145 314 1.1E-42 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 M634_18830 6f609ef6673bd56f9670e4413ee2d662 317 SUPERFAMILY SSF51735 2 144 4.4E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_18830 6f609ef6673bd56f9670e4413ee2d662 317 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 310 1.6E-19 T 12-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 M634_18830 6f609ef6673bd56f9670e4413ee2d662 317 SUPERFAMILY SSF56327 143 308 3.6E-40 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 M634_18830 6f609ef6673bd56f9670e4413ee2d662 317 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 141 1.6E-32 T 12-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 M634_18830 6f609ef6673bd56f9670e4413ee2d662 317 PIRSF PIRSF000102 1 317 8.2E-89 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 M634_18830 6f609ef6673bd56f9670e4413ee2d662 317 PRINTS PR00086 L-lactate dehydrogenase signature 27 51 8.1E-22 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 M634_18830 6f609ef6673bd56f9670e4413ee2d662 317 PRINTS PR00086 L-lactate dehydrogenase signature 116 136 8.1E-22 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 M634_18830 6f609ef6673bd56f9670e4413ee2d662 317 PRINTS PR00086 L-lactate dehydrogenase signature 140 158 8.1E-22 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 M634_18830 6f609ef6673bd56f9670e4413ee2d662 317 PRINTS PR00086 L-lactate dehydrogenase signature 2 26 8.1E-22 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 M634_18830 6f609ef6673bd56f9670e4413ee2d662 317 PRINTS PR00086 L-lactate dehydrogenase signature 170 183 8.1E-22 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 M634_18750 93bd4394986198333806de31ccc77a58 447 Pfam PF01523 Putative modulator of DNA gyrase 24 312 2.7E-43 T 12-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 M634_18750 93bd4394986198333806de31ccc77a58 447 Gene3D G3DSA:3.30.2290.10 4 212 4.3E-34 T 12-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal M634_18750 93bd4394986198333806de31ccc77a58 447 SUPERFAMILY SSF111283 8 445 6.93E-94 T 12-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 M634_16590 58b54c88cf2cf446539b969c9cfefe21 280 Gene3D G3DSA:1.10.10.60 177 227 4.9E-13 T 12-10-2018 M634_16590 58b54c88cf2cf446539b969c9cfefe21 280 SUPERFAMILY SSF46689 181 227 3.76E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_16590 58b54c88cf2cf446539b969c9cfefe21 280 Pfam PF12833 Helix-turn-helix domain 200 278 3.5E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_16590 58b54c88cf2cf446539b969c9cfefe21 280 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 231 273 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 M634_16590 58b54c88cf2cf446539b969c9cfefe21 280 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 261 277 4.3E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M634_16590 58b54c88cf2cf446539b969c9cfefe21 280 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 246 261 4.3E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M634_16590 58b54c88cf2cf446539b969c9cfefe21 280 SUPERFAMILY SSF46689 230 279 4.93E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_16590 58b54c88cf2cf446539b969c9cfefe21 280 SUPERFAMILY SSF51182 26 78 6.02E-5 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily M634_16590 58b54c88cf2cf446539b969c9cfefe21 280 Gene3D G3DSA:1.10.10.60 228 280 1.2E-16 T 12-10-2018 M634_16590 58b54c88cf2cf446539b969c9cfefe21 280 SMART SM00342 194 277 1.7E-30 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_03150 0ef95e12cf361ce12a1d2bc720ac8146 389 SUPERFAMILY SSF53756 2 378 2.59E-37 T 12-10-2018 M634_03150 0ef95e12cf361ce12a1d2bc720ac8146 389 Gene3D G3DSA:3.40.50.2000 1 189 5.2E-13 T 12-10-2018 M634_03150 0ef95e12cf361ce12a1d2bc720ac8146 389 Gene3D G3DSA:3.40.50.2000 190 366 7.9E-18 T 12-10-2018 M634_03150 0ef95e12cf361ce12a1d2bc720ac8146 389 Pfam PF00534 Glycosyl transferases group 1 189 353 5.9E-12 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 M634_03150 0ef95e12cf361ce12a1d2bc720ac8146 389 Pfam PF13579 Glycosyl transferase 4-like domain 1 167 2.1E-8 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 M634_19390 bd4bc34661cc019fd53e70fba78a76db 304 Pfam PF04393 Protein of unknown function (DUF535) 29 300 4.8E-83 T 12-10-2018 IPR007488 Protein of unknown function DUF535 M634_19985 555299134041f94d06982138dfe1020d 280 SUPERFAMILY SSF46894 209 274 2.28E-16 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M634_19985 555299134041f94d06982138dfe1020d 280 Pfam PF00196 Bacterial regulatory proteins, luxR family 216 270 1.5E-15 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_19985 555299134041f94d06982138dfe1020d 280 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 247 259 8.9E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_19985 555299134041f94d06982138dfe1020d 280 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 217 231 8.9E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_19985 555299134041f94d06982138dfe1020d 280 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 231 247 8.9E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_19985 555299134041f94d06982138dfe1020d 280 SMART SM00421 214 271 8.3E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_19985 555299134041f94d06982138dfe1020d 280 Gene3D G3DSA:1.10.10.10 193 277 1.7E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_00500 60a1610601a2b33ae80aba96b1509bbf 394 Gene3D G3DSA:2.40.30.10 149 254 4.8E-33 T 12-10-2018 M634_00500 60a1610601a2b33ae80aba96b1509bbf 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 183 193 2.4E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M634_00500 60a1610601a2b33ae80aba96b1509bbf 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 263 282 2.4E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M634_00500 60a1610601a2b33ae80aba96b1509bbf 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 204 211 2.4E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M634_00500 60a1610601a2b33ae80aba96b1509bbf 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 356 364 2.4E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 M634_00500 60a1610601a2b33ae80aba96b1509bbf 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 356 364 1.9E-9 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 M634_00500 60a1610601a2b33ae80aba96b1509bbf 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 1.9E-9 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 M634_00500 60a1610601a2b33ae80aba96b1509bbf 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 1.9E-9 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 M634_00500 60a1610601a2b33ae80aba96b1509bbf 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 183 195 1.9E-9 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 M634_00500 60a1610601a2b33ae80aba96b1509bbf 394 Pfam PF00970 Oxidoreductase FAD-binding domain 155 252 1.5E-14 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 M634_00500 60a1610601a2b33ae80aba96b1509bbf 394 SUPERFAMILY SSF63380 148 253 6.37E-29 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel M634_00500 60a1610601a2b33ae80aba96b1509bbf 394 SUPERFAMILY SSF52343 255 393 6.55E-38 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M634_00500 60a1610601a2b33ae80aba96b1509bbf 394 Gene3D G3DSA:3.40.50.80 255 394 6.0E-34 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M634_00500 60a1610601a2b33ae80aba96b1509bbf 394 Hamap MF_01252 Flavohemoprotein [hmp]. 1 394 55.417 T 12-10-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 M634_00500 60a1610601a2b33ae80aba96b1509bbf 394 Gene3D G3DSA:1.10.490.10 1 142 1.8E-50 T 12-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 M634_00500 60a1610601a2b33ae80aba96b1509bbf 394 Pfam PF00175 Oxidoreductase NAD-binding domain 264 370 6.4E-19 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 M634_00500 60a1610601a2b33ae80aba96b1509bbf 394 SUPERFAMILY SSF46458 1 142 3.16E-37 T 12-10-2018 IPR009050 Globin-like superfamily M634_00500 60a1610601a2b33ae80aba96b1509bbf 394 Pfam PF00042 Globin 7 102 4.7E-15 T 12-10-2018 IPR000971 Globin GO:0020037 M634_22320 3f9accd2cd50f8632327178cd464a6a3 551 Pfam PF09818 Predicted ATPase of the ABC class 1 438 2.5E-187 T 12-10-2018 IPR019195 ABC transporter, ATPase, putative M634_22320 3f9accd2cd50f8632327178cd464a6a3 551 SUPERFAMILY SSF52540 227 410 1.06E-5 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_02335 e396e6267881793da206927240b7f9b7 520 SUPERFAMILY SSF53927 259 430 3.39E-28 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 M634_02335 e396e6267881793da206927240b7f9b7 520 Gene3D G3DSA:3.40.50.300 40 248 3.4E-23 T 12-10-2018 M634_02335 e396e6267881793da206927240b7f9b7 520 Gene3D G3DSA:3.40.140.10 258 453 1.1E-50 T 12-10-2018 M634_02335 e396e6267881793da206927240b7f9b7 520 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 374 410 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 M634_02335 e396e6267881793da206927240b7f9b7 520 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 259 421 2.0E-18 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain M634_14145 5050c4a5cc99484cb90466ca72db3c25 446 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 446 46.452 T 12-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 M634_14145 5050c4a5cc99484cb90466ca72db3c25 446 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 256 2.3E-113 T 12-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 M634_14145 5050c4a5cc99484cb90466ca72db3c25 446 Pfam PF11973 NQRA C-terminal domain 261 310 1.7E-21 T 12-10-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 M634_14145 5050c4a5cc99484cb90466ca72db3c25 446 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 446 2.4E-205 T 12-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 M634_17265 df5c6d9d34a9b432919f9abf29edc75a 807 Pfam PF02901 Pyruvate formate lyase-like 8 668 1.4E-218 T 12-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 M634_17265 df5c6d9d34a9b432919f9abf29edc75a 807 Pfam PF01228 Glycine radical 685 788 1.6E-30 T 12-10-2018 IPR001150 Glycine radical domain GO:0003824 M634_17265 df5c6d9d34a9b432919f9abf29edc75a 807 SUPERFAMILY SSF51998 4 806 7.32E-222 T 12-10-2018 M634_17265 df5c6d9d34a9b432919f9abf29edc75a 807 ProSitePatterns PS00850 Glycine radical domain signature. 778 786 - T 12-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site M634_17265 df5c6d9d34a9b432919f9abf29edc75a 807 Gene3D G3DSA:3.20.70.20 7 807 5.7E-277 T 12-10-2018 M634_17265 df5c6d9d34a9b432919f9abf29edc75a 807 TIGRFAM TIGR01774 PFL2-3: glycyl radical enzyme, PFL2/glycerol dehydratase family 6 807 0.0 T 12-10-2018 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 M634_17265 df5c6d9d34a9b432919f9abf29edc75a 807 PIRSF PIRSF000379 10 807 1.5E-167 T 12-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 M634_22385 6334f1b8412257f24438750c6b9e2499 693 Gene3D G3DSA:2.40.170.20 166 693 1.3E-115 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily M634_22385 6334f1b8412257f24438750c6b9e2499 693 SUPERFAMILY SSF56935 19 693 4.58E-118 T 12-10-2018 M634_22385 6334f1b8412257f24438750c6b9e2499 693 Pfam PF07715 TonB-dependent Receptor Plug Domain 42 151 9.2E-24 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain M634_22385 6334f1b8412257f24438750c6b9e2499 693 Gene3D G3DSA:2.170.130.10 38 165 3.0E-34 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily M634_22385 6334f1b8412257f24438750c6b9e2499 693 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 28 693 1.6E-141 T 12-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 M634_22385 6334f1b8412257f24438750c6b9e2499 693 Pfam PF00593 TonB dependent receptor 176 691 4.0E-62 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel M634_22385 6334f1b8412257f24438750c6b9e2499 693 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 28 693 4.3E-156 T 12-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 M634_08025 778558048ce8d1241dc80d2b2cf1899b 492 Pfam PF13460 NAD(P)H-binding 8 150 4.6E-15 T 12-10-2018 IPR016040 NAD(P)-binding domain M634_08025 778558048ce8d1241dc80d2b2cf1899b 492 SUPERFAMILY SSF51735 1 295 1.31E-45 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_08025 778558048ce8d1241dc80d2b2cf1899b 492 Pfam PF11066 Protein of unknown function (DUF2867) 333 466 8.1E-14 T 12-10-2018 IPR021295 Protein of unknown function DUF2867 M634_08025 778558048ce8d1241dc80d2b2cf1899b 492 Gene3D G3DSA:3.40.50.720 2 262 3.3E-35 T 12-10-2018 M634_09495 c7c9d2636b434f8b019073a917cc2db8 149 Pfam PF06303 MatP N-terminal domain 2 85 4.7E-42 T 12-10-2018 IPR035087 MatP, N-terminal M634_09495 c7c9d2636b434f8b019073a917cc2db8 149 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 29.967 T 12-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 M634_09495 c7c9d2636b434f8b019073a917cc2db8 149 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 134 3.0E-73 T 12-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 M634_09495 c7c9d2636b434f8b019073a917cc2db8 149 Gene3D G3DSA:1.20.1270.380 1 89 5.3E-48 T 12-10-2018 IPR038339 MatP, N-terminal domain superfamily M634_09495 c7c9d2636b434f8b019073a917cc2db8 149 Pfam PF17414 MatP C-terminal ribbon-helix-helix domain 88 147 1.0E-26 T 12-10-2018 IPR035375 MatP, C-terminal ribbon-helix-helix domain M634_09495 c7c9d2636b434f8b019073a917cc2db8 149 Gene3D G3DSA:1.10.1220.10 98 149 3.7E-22 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 M634_06085 7b17731b1a322ead51c2e865b9d5288f 116 SMART SM00938 6 104 7.6E-6 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 M634_06085 7b17731b1a322ead51c2e865b9d5288f 116 Gene3D G3DSA:3.30.70.120 1 104 1.3E-14 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal M634_06085 7b17731b1a322ead51c2e865b9d5288f 116 SUPERFAMILY SSF54913 1 102 1.11E-21 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta M634_00675 ae31bdc448c73792b5db819da1c363a5 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 75 95 1.5E-38 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 M634_00675 ae31bdc448c73792b5db819da1c363a5 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 99 121 1.5E-38 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 M634_00675 ae31bdc448c73792b5db819da1c363a5 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 125 143 1.5E-38 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 M634_00675 ae31bdc448c73792b5db819da1c363a5 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 15 32 1.5E-38 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 M634_00675 ae31bdc448c73792b5db819da1c363a5 154 Gene3D G3DSA:3.10.420.10 3 154 2.7E-58 T 12-10-2018 IPR035958 SecB-like superfamily M634_00675 ae31bdc448c73792b5db819da1c363a5 154 Pfam PF02556 Preprotein translocase subunit SecB 7 146 1.4E-55 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 M634_00675 ae31bdc448c73792b5db819da1c363a5 154 Hamap MF_00821 Protein-export protein SecB [secB]. 1 147 32.171 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 M634_00675 ae31bdc448c73792b5db819da1c363a5 154 SUPERFAMILY SSF54611 4 143 4.8E-52 T 12-10-2018 IPR035958 SecB-like superfamily M634_00675 ae31bdc448c73792b5db819da1c363a5 154 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 8 146 1.2E-59 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 M634_13020 f510fb3cd6a4a67f45f755879b5620db 559 SUPERFAMILY SSF82861 300 386 7.19E-14 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 M634_13020 f510fb3cd6a4a67f45f755879b5620db 559 Pfam PF00924 Mechanosensitive ion channel 350 542 2.7E-54 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 M634_13020 f510fb3cd6a4a67f45f755879b5620db 559 SUPERFAMILY SSF82689 456 552 1.57E-31 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 M634_13020 f510fb3cd6a4a67f45f755879b5620db 559 Gene3D G3DSA:3.30.70.100 454 546 4.2E-26 T 12-10-2018 M634_13020 f510fb3cd6a4a67f45f755879b5620db 559 SUPERFAMILY SSF50182 387 453 2.22E-18 T 12-10-2018 IPR010920 LSM domain superfamily M634_13020 f510fb3cd6a4a67f45f755879b5620db 559 Gene3D G3DSA:2.30.30.60 403 451 2.6E-18 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily M634_15090 21f451400dc3f2dffe35afa636ff6a21 316 Gene3D G3DSA:3.90.180.10 10 310 9.6E-92 T 12-10-2018 M634_15090 21f451400dc3f2dffe35afa636ff6a21 316 SUPERFAMILY SSF50129 4 154 3.8E-35 T 12-10-2018 IPR011032 GroES-like superfamily M634_15090 21f451400dc3f2dffe35afa636ff6a21 316 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 93 1.2E-8 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 M634_15090 21f451400dc3f2dffe35afa636ff6a21 316 SMART SM00829 12 312 1.3E-13 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 M634_15090 21f451400dc3f2dffe35afa636ff6a21 316 SUPERFAMILY SSF51735 123 243 1.03E-27 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_15090 21f451400dc3f2dffe35afa636ff6a21 316 Gene3D G3DSA:3.40.50.720 133 263 9.6E-92 T 12-10-2018 M634_15090 21f451400dc3f2dffe35afa636ff6a21 316 Pfam PF13602 Zinc-binding dehydrogenase 191 312 1.9E-19 T 12-10-2018 M634_13285 f90faade2ac3d8a11b3323ef1d296025 199 Pfam PF02132 RecR protein 41 77 2.4E-14 T 12-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger M634_13285 f90faade2ac3d8a11b3323ef1d296025 199 Gene3D G3DSA:3.40.1360.10 78 199 1.2E-38 T 12-10-2018 M634_13285 f90faade2ac3d8a11b3323ef1d296025 199 SMART SM00493 81 166 1.3E-16 T 12-10-2018 IPR006171 TOPRIM domain M634_13285 f90faade2ac3d8a11b3323ef1d296025 199 Pfam PF13662 Toprim domain 82 172 5.4E-23 T 12-10-2018 IPR006171 TOPRIM domain M634_13285 f90faade2ac3d8a11b3323ef1d296025 199 TIGRFAM TIGR00615 recR: recombination protein RecR 3 197 4.1E-78 T 12-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 M634_13285 f90faade2ac3d8a11b3323ef1d296025 199 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 101.386 T 12-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 M634_13285 f90faade2ac3d8a11b3323ef1d296025 199 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 12-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 M634_13285 f90faade2ac3d8a11b3323ef1d296025 199 Gene3D G3DSA:1.10.8.420 1 52 1.2E-18 T 12-10-2018 M634_13285 f90faade2ac3d8a11b3323ef1d296025 199 SUPERFAMILY SSF111304 2 199 2.35E-71 T 12-10-2018 IPR023627 Recombination protein RecR M634_01935 d4430f5877f40eb138da9c8be891b659 140 Gene3D G3DSA:1.20.5.440 92 135 2.3E-19 T 12-10-2018 M634_01935 d4430f5877f40eb138da9c8be891b659 140 Gene3D G3DSA:2.60.15.10 4 91 2.5E-31 T 12-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_01935 d4430f5877f40eb138da9c8be891b659 140 SUPERFAMILY SSF51344 5 87 3.79E-24 T 12-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_01935 d4430f5877f40eb138da9c8be891b659 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 134 4.0E-12 T 12-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain M634_01935 d4430f5877f40eb138da9c8be891b659 140 SUPERFAMILY SSF46604 89 138 1.96E-14 T 12-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_01935 d4430f5877f40eb138da9c8be891b659 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 91 8.0E-41 T 12-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_01935 d4430f5877f40eb138da9c8be891b659 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 132 20.795 T 12-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_01935 d4430f5877f40eb138da9c8be891b659 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 134 7.3E-44 T 12-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_01935 d4430f5877f40eb138da9c8be891b659 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 85 8.3E-29 T 12-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_05230 6f51031143fe4b8d3a1dca46ca676b52 174 Pfam PF14437 MafB19-like deaminase 10 155 3.9E-32 T 12-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 M634_05230 6f51031143fe4b8d3a1dca46ca676b52 174 Gene3D G3DSA:3.40.140.10 3 169 4.8E-63 T 12-10-2018 M634_05230 6f51031143fe4b8d3a1dca46ca676b52 174 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 14 155 45.017 T 12-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 M634_05230 6f51031143fe4b8d3a1dca46ca676b52 174 SUPERFAMILY SSF53927 5 159 1.13E-55 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 M634_05230 6f51031143fe4b8d3a1dca46ca676b52 174 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 59 96 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 M634_12740 834e240047e361058a04935862324030 442 Gene3D G3DSA:1.10.443.10 217 415 1.4E-16 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 M634_12740 834e240047e361058a04935862324030 442 Pfam PF00589 Phage integrase family 231 374 1.9E-12 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 M634_12740 834e240047e361058a04935862324030 442 SUPERFAMILY SSF56349 216 374 2.41E-16 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 M634_07845 3896ffc20380efe90995268851252be5 230 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 47 61 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 M634_07845 3896ffc20380efe90995268851252be5 230 TIGRFAM TIGR01621 RluA-like: pseudouridine synthase Rlu family protein, TIGR01621 1 220 1.2E-108 T 12-10-2018 IPR006508 Pseudouridine synthase, RluA-like M634_07845 3896ffc20380efe90995268851252be5 230 Pfam PF00849 RNA pseudouridylate synthase 10 153 5.1E-27 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 M634_07845 3896ffc20380efe90995268851252be5 230 SUPERFAMILY SSF55120 2 199 2.24E-47 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 M634_07845 3896ffc20380efe90995268851252be5 230 Gene3D G3DSA:3.30.2350.10 1 196 3.2E-48 T 12-10-2018 M634_01170 ad0cd030d8893e42533f168a2d38fac0 152 Pfam PF13673 Acetyltransferase (GNAT) domain 34 118 1.1E-6 T 12-10-2018 IPR000182 GNAT domain M634_01170 ad0cd030d8893e42533f168a2d38fac0 152 Gene3D G3DSA:3.40.630.30 16 138 9.5E-11 T 12-10-2018 M634_01170 ad0cd030d8893e42533f168a2d38fac0 152 SUPERFAMILY SSF55729 5 119 5.89E-12 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_14390 c910eb7fa1a786e630be6a0af4edfd6e 328 SUPERFAMILY SSF47413 1 51 1.22E-12 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M634_14390 c910eb7fa1a786e630be6a0af4edfd6e 328 Gene3D G3DSA:1.10.260.40 1 60 3.2E-18 T 12-10-2018 M634_14390 c910eb7fa1a786e630be6a0af4edfd6e 328 Pfam PF13377 Periplasmic binding protein-like domain 167 327 9.1E-31 T 12-10-2018 M634_14390 c910eb7fa1a786e630be6a0af4edfd6e 328 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 12-10-2018 M634_14390 c910eb7fa1a786e630be6a0af4edfd6e 328 Gene3D G3DSA:3.40.50.2300 79 319 3.7E-45 T 12-10-2018 M634_14390 c910eb7fa1a786e630be6a0af4edfd6e 328 SUPERFAMILY SSF53822 77 324 2.75E-43 T 12-10-2018 IPR028082 Periplasmic binding protein-like I M634_14390 c910eb7fa1a786e630be6a0af4edfd6e 328 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 49 2.1E-17 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M634_14390 c910eb7fa1a786e630be6a0af4edfd6e 328 Gene3D G3DSA:3.40.50.2300 159 321 3.7E-45 T 12-10-2018 M634_14390 c910eb7fa1a786e630be6a0af4edfd6e 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.7E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M634_14390 c910eb7fa1a786e630be6a0af4edfd6e 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.7E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M634_14390 c910eb7fa1a786e630be6a0af4edfd6e 328 SMART SM00354 1 74 1.8E-14 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M634_13260 749ad53e5c622904ac670f8e9fb30776 219 Pfam PF08348 YheO-like PAS domain 14 121 2.1E-34 T 12-10-2018 IPR013559 YheO-like M634_13260 749ad53e5c622904ac670f8e9fb30776 219 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 15 114 1.0E-52 T 12-10-2018 IPR013559 YheO-like M634_13260 749ad53e5c622904ac670f8e9fb30776 219 Pfam PF13309 HTH domain 157 214 5.0E-15 T 12-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain M634_15280 2b17c497f3976e99250fe3690daf6af2 320 Hamap MF_00367 GTPase Era [era]. 24 316 35.748 T 12-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_15280 2b17c497f3976e99250fe3690daf6af2 320 TIGRFAM TIGR00436 era: GTP-binding protein Era 27 299 4.8E-110 T 12-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_15280 2b17c497f3976e99250fe3690daf6af2 320 Pfam PF07650 KH domain 227 304 4.3E-21 T 12-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_15280 2b17c497f3976e99250fe3690daf6af2 320 Gene3D G3DSA:3.30.300.20 204 318 2.0E-42 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta M634_15280 2b17c497f3976e99250fe3690daf6af2 320 Gene3D G3DSA:3.40.50.300 20 202 1.0E-51 T 12-10-2018 M634_15280 2b17c497f3976e99250fe3690daf6af2 320 SUPERFAMILY SSF54814 200 316 2.35E-41 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 M634_15280 2b17c497f3976e99250fe3690daf6af2 320 Pfam PF01926 50S ribosome-binding GTPase 29 143 2.8E-23 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M634_15280 2b17c497f3976e99250fe3690daf6af2 320 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 26 188 9.0E-39 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 M634_15280 2b17c497f3976e99250fe3690daf6af2 320 SUPERFAMILY SSF52540 29 224 6.28E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_06325 7de080ca1a016b9fb4c943c6310fb9e1 277 Pfam PF00551 Formyl transferase 82 259 5.9E-50 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 M634_06325 7de080ca1a016b9fb4c943c6310fb9e1 277 Gene3D G3DSA:3.30.70.260 1 77 3.6E-15 T 12-10-2018 M634_06325 7de080ca1a016b9fb4c943c6310fb9e1 277 SUPERFAMILY SSF55021 4 55 2.33E-8 T 12-10-2018 M634_06325 7de080ca1a016b9fb4c943c6310fb9e1 277 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 277 44.977 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 M634_06325 7de080ca1a016b9fb4c943c6310fb9e1 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 229 251 1.8E-64 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 M634_06325 7de080ca1a016b9fb4c943c6310fb9e1 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 251 276 1.8E-64 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 M634_06325 7de080ca1a016b9fb4c943c6310fb9e1 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 1.8E-64 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 M634_06325 7de080ca1a016b9fb4c943c6310fb9e1 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 1.8E-64 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 M634_06325 7de080ca1a016b9fb4c943c6310fb9e1 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 83 105 1.8E-64 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 M634_06325 7de080ca1a016b9fb4c943c6310fb9e1 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 105 132 1.8E-64 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 M634_06325 7de080ca1a016b9fb4c943c6310fb9e1 277 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 5 277 1.3E-122 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 M634_06325 7de080ca1a016b9fb4c943c6310fb9e1 277 SUPERFAMILY SSF53328 82 276 1.7E-60 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 M634_06325 7de080ca1a016b9fb4c943c6310fb9e1 277 Pfam PF01842 ACT domain 5 65 1.2E-6 T 12-10-2018 IPR002912 ACT domain M634_06325 7de080ca1a016b9fb4c943c6310fb9e1 277 PIRSF PIRSF036480 1 277 2.1E-112 T 12-10-2018 M634_06325 7de080ca1a016b9fb4c943c6310fb9e1 277 Gene3D G3DSA:3.40.50.170 81 277 1.5E-67 T 12-10-2018 M634_11880 a03e55a87b54f44df3e175b80440f467 760 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 665 6.0E-114 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 M634_11880 a03e55a87b54f44df3e175b80440f467 760 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 142 219 5.0E-11 T 12-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 M634_11880 a03e55a87b54f44df3e175b80440f467 760 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 M634_11880 a03e55a87b54f44df3e175b80440f467 760 Pfam PF03477 ATP cone domain 6 92 2.1E-18 T 12-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 M634_11880 a03e55a87b54f44df3e175b80440f467 760 SUPERFAMILY SSF51998 222 738 5.8E-164 T 12-10-2018 M634_11880 a03e55a87b54f44df3e175b80440f467 760 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 5.4E-175 T 12-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 M634_11880 a03e55a87b54f44df3e175b80440f467 760 Gene3D G3DSA:3.20.70.20 78 742 2.8E-155 T 12-10-2018 M634_11880 a03e55a87b54f44df3e175b80440f467 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 1.6E-36 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 M634_11880 a03e55a87b54f44df3e175b80440f467 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 1.6E-36 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 M634_11880 a03e55a87b54f44df3e175b80440f467 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 1.6E-36 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 M634_11880 a03e55a87b54f44df3e175b80440f467 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 1.6E-36 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 M634_11880 a03e55a87b54f44df3e175b80440f467 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 1.6E-36 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 M634_11880 a03e55a87b54f44df3e175b80440f467 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 1.6E-36 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 M634_11880 a03e55a87b54f44df3e175b80440f467 760 SUPERFAMILY SSF48168 10 221 2.49E-74 T 12-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 M634_08180 8bb094f9c2f6f0f4c760a0a4f7d91303 456 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 406 422 - T 12-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 M634_08180 8bb094f9c2f6f0f4c760a0a4f7d91303 456 Pfam PF00939 Sodium:sulfate symporter transmembrane region 37 456 4.0E-56 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 M634_08180 8bb094f9c2f6f0f4c760a0a4f7d91303 456 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 38 456 9.9E-109 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 M634_14575 ed7cc28712fe8d693730997c7058ca94 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 1.2E-7 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 M634_14575 ed7cc28712fe8d693730997c7058ca94 529 Gene3D G3DSA:3.30.70.3280 390 529 1.6E-52 T 12-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily M634_14575 ed7cc28712fe8d693730997c7058ca94 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 3.3E-10 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_14575 ed7cc28712fe8d693730997c7058ca94 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 3.3E-10 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_14575 ed7cc28712fe8d693730997c7058ca94 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 3.3E-10 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_14575 ed7cc28712fe8d693730997c7058ca94 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 3.3E-10 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_14575 ed7cc28712fe8d693730997c7058ca94 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 154 4.6E-19 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 M634_14575 ed7cc28712fe8d693730997c7058ca94 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 5 529 2.1E-300 T 12-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 M634_14575 ed7cc28712fe8d693730997c7058ca94 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site M634_14575 ed7cc28712fe8d693730997c7058ca94 529 SUPERFAMILY SSF52540 10 277 4.12E-85 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_14575 ed7cc28712fe8d693730997c7058ca94 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 4.2E-46 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 M634_14575 ed7cc28712fe8d693730997c7058ca94 529 Gene3D G3DSA:3.40.50.300 110 275 7.6E-114 T 12-10-2018 M634_14575 ed7cc28712fe8d693730997c7058ca94 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 2.9E-46 T 12-10-2018 IPR032090 Peptide chain release factor 3, C-terminal M634_14575 ed7cc28712fe8d693730997c7058ca94 529 SUPERFAMILY SSF50447 262 393 4.04E-27 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily M634_14575 ed7cc28712fe8d693730997c7058ca94 529 Gene3D G3DSA:3.40.50.300 72 379 7.6E-114 T 12-10-2018 M634_14575 ed7cc28712fe8d693730997c7058ca94 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 51.86 T 12-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 M634_14575 ed7cc28712fe8d693730997c7058ca94 529 SUPERFAMILY SSF54980 393 468 2.81E-17 T 12-10-2018 IPR035647 EF-G domain III/V-like M634_14935 eb88ad8db514a065418b3ce47b439fa6 305 SMART SM00382 29 213 2.1E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_14935 eb88ad8db514a065418b3ce47b439fa6 305 Pfam PF00005 ABC transporter 20 164 6.6E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_14935 eb88ad8db514a065418b3ce47b439fa6 305 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_14935 eb88ad8db514a065418b3ce47b439fa6 305 Gene3D G3DSA:3.40.50.300 1 237 5.1E-65 T 12-10-2018 M634_14935 eb88ad8db514a065418b3ce47b439fa6 305 SUPERFAMILY SSF52540 3 231 1.78E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_07400 19b08b31d1a55fb6b96c2cf639206260 340 Gene3D G3DSA:3.40.50.620 13 332 8.9E-99 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M634_07400 19b08b31d1a55fb6b96c2cf639206260 340 Gene3D G3DSA:1.10.240.10 191 305 8.9E-99 T 12-10-2018 M634_07400 19b08b31d1a55fb6b96c2cf639206260 340 Pfam PF00579 tRNA synthetases class I (W and Y) 10 292 8.6E-54 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 M634_07400 19b08b31d1a55fb6b96c2cf639206260 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 204 214 1.5E-21 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 M634_07400 19b08b31d1a55fb6b96c2cf639206260 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 74 93 1.5E-21 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 M634_07400 19b08b31d1a55fb6b96c2cf639206260 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 152 173 1.5E-21 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 M634_07400 19b08b31d1a55fb6b96c2cf639206260 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 23 39 1.5E-21 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 M634_07400 19b08b31d1a55fb6b96c2cf639206260 340 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 10 337 2.2E-68 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 M634_07400 19b08b31d1a55fb6b96c2cf639206260 340 SUPERFAMILY SSF52374 12 337 3.78E-74 T 12-10-2018 M634_05130 3efb29bd3ec09589cb26be4ffbbf2617 296 SUPERFAMILY SSF53850 96 293 2.17E-24 T 12-10-2018 M634_05130 3efb29bd3ec09589cb26be4ffbbf2617 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 6.2E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_05130 3efb29bd3ec09589cb26be4ffbbf2617 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 6.2E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_05130 3efb29bd3ec09589cb26be4ffbbf2617 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 6.2E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_05130 3efb29bd3ec09589cb26be4ffbbf2617 296 Pfam PF03466 LysR substrate binding domain 96 292 2.8E-20 T 12-10-2018 IPR005119 LysR, substrate-binding M634_05130 3efb29bd3ec09589cb26be4ffbbf2617 296 Gene3D G3DSA:3.40.190.10 103 289 3.5E-60 T 12-10-2018 M634_05130 3efb29bd3ec09589cb26be4ffbbf2617 296 Gene3D G3DSA:3.40.190.10 166 263 3.5E-60 T 12-10-2018 M634_05130 3efb29bd3ec09589cb26be4ffbbf2617 296 Gene3D G3DSA:1.10.10.10 9 97 1.4E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_05130 3efb29bd3ec09589cb26be4ffbbf2617 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 3.7E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_05130 3efb29bd3ec09589cb26be4ffbbf2617 296 SUPERFAMILY SSF46785 4 117 7.52E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_02975 29446db8f402259f629c5f22d306d610 262 SUPERFAMILY SSF53448 1 256 6.0E-40 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M634_02975 29446db8f402259f629c5f22d306d610 262 Pfam PF02709 N-terminal domain of galactosyltransferase 166 226 4.1E-15 T 12-10-2018 IPR027791 Galactosyltransferase, C-terminal Reactome: R-HSA-2022854|Reactome: R-HSA-975577 M634_02975 29446db8f402259f629c5f22d306d610 262 Gene3D G3DSA:3.90.550.10 1 238 1.5E-44 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M634_02975 29446db8f402259f629c5f22d306d610 262 Pfam PF00535 Glycosyl transferase family 2 5 117 5.4E-19 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 M634_08295 ac1ee18f4a8ff446dcd9afa99de79fa7 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 68 3.1E-17 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_08295 ac1ee18f4a8ff446dcd9afa99de79fa7 235 SMART SM00345 9 68 4.4E-18 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_08295 ac1ee18f4a8ff446dcd9afa99de79fa7 235 Gene3D G3DSA:1.10.10.10 1 69 9.8E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_08295 ac1ee18f4a8ff446dcd9afa99de79fa7 235 SUPERFAMILY SSF46785 3 72 1.92E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_08295 ac1ee18f4a8ff446dcd9afa99de79fa7 235 Gene3D G3DSA:3.40.1410.10 89 224 5.6E-30 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily M634_08295 ac1ee18f4a8ff446dcd9afa99de79fa7 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 1.6E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_08295 ac1ee18f4a8ff446dcd9afa99de79fa7 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 1.6E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_08295 ac1ee18f4a8ff446dcd9afa99de79fa7 235 SUPERFAMILY SSF64288 95 231 3.93E-36 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily M634_08295 ac1ee18f4a8ff446dcd9afa99de79fa7 235 Pfam PF07702 UTRA domain 92 228 4.4E-32 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 M634_08295 ac1ee18f4a8ff446dcd9afa99de79fa7 235 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 4 233 1.6E-91 T 12-10-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 M634_08295 ac1ee18f4a8ff446dcd9afa99de79fa7 235 SMART SM00866 91 228 3.1E-26 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 M634_23315 43ca5bc2367edd991cfce67375cc594c 327 Pfam PF02780 Transketolase, C-terminal domain 198 315 7.4E-36 T 12-10-2018 IPR033248 Transketolase, C-terminal domain M634_23315 43ca5bc2367edd991cfce67375cc594c 327 SUPERFAMILY SSF52518 4 190 1.5E-64 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold M634_23315 43ca5bc2367edd991cfce67375cc594c 327 SUPERFAMILY SSF52922 190 323 6.94E-37 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 M634_23315 43ca5bc2367edd991cfce67375cc594c 327 Gene3D G3DSA:3.40.50.920 192 325 2.9E-41 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 M634_23315 43ca5bc2367edd991cfce67375cc594c 327 Gene3D G3DSA:3.40.50.970 1 191 9.8E-75 T 12-10-2018 M634_23315 43ca5bc2367edd991cfce67375cc594c 327 SMART SM00861 4 179 1.4E-62 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain M634_23315 43ca5bc2367edd991cfce67375cc594c 327 Pfam PF02779 Transketolase, pyrimidine binding domain 4 178 4.8E-48 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain M634_04615 6de0dea5c8a5fd58d926ea1adb607b33 333 Gene3D G3DSA:2.70.70.10 120 276 1.9E-41 T 12-10-2018 IPR011055 Duplicated hybrid motif M634_04615 6de0dea5c8a5fd58d926ea1adb607b33 333 SUPERFAMILY SSF51261 76 272 7.59E-52 T 12-10-2018 IPR011055 Duplicated hybrid motif M634_04615 6de0dea5c8a5fd58d926ea1adb607b33 333 Pfam PF01551 Peptidase family M23 174 269 3.5E-29 T 12-10-2018 IPR016047 Peptidase M23 M634_06600 3308a9ef8492d5667d1c583302c6be8d 426 SMART SM00382 113 266 2.0E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_06600 3308a9ef8492d5667d1c583302c6be8d 426 SMART SM00994 13 52 1.0E-24 T 12-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 M634_06600 3308a9ef8492d5667d1c583302c6be8d 426 SUPERFAMILY SSF57716 14 49 5.84E-12 T 12-10-2018 M634_06600 3308a9ef8492d5667d1c583302c6be8d 426 Gene3D G3DSA:1.10.8.60 318 426 1.7E-41 T 12-10-2018 M634_06600 3308a9ef8492d5667d1c583302c6be8d 426 SUPERFAMILY SSF52540 63 404 5.02E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_06600 3308a9ef8492d5667d1c583302c6be8d 426 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 5 417 53.324 T 12-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 M634_06600 3308a9ef8492d5667d1c583302c6be8d 426 SMART SM01086 319 414 2.4E-34 T 12-10-2018 IPR019489 Clp ATPase, C-terminal M634_06600 3308a9ef8492d5667d1c583302c6be8d 426 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 312 1.2E-48 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 M634_06600 3308a9ef8492d5667d1c583302c6be8d 426 Gene3D G3DSA:3.30.50.30 2 53 1.4E-26 T 12-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily M634_06600 3308a9ef8492d5667d1c583302c6be8d 426 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 12 414 2.2E-209 T 12-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 M634_06600 3308a9ef8492d5667d1c583302c6be8d 426 Pfam PF06689 ClpX C4-type zinc finger 14 51 1.2E-20 T 12-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 M634_06600 3308a9ef8492d5667d1c583302c6be8d 426 Gene3D G3DSA:3.40.50.300 59 317 1.0E-108 T 12-10-2018 M634_06600 3308a9ef8492d5667d1c583302c6be8d 426 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 396 7.1E-16 T 12-10-2018 IPR019489 Clp ATPase, C-terminal M634_04330 4f9e79a5e232f1801e780e3a4e29fe15 783 SMART SM00091 155 221 9.2E-8 T 12-10-2018 IPR000014 PAS domain M634_04330 4f9e79a5e232f1801e780e3a4e29fe15 783 SMART SM00073 673 779 5.7E-10 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 M634_04330 4f9e79a5e232f1801e780e3a4e29fe15 783 Gene3D G3DSA:3.30.450.20 151 267 3.1E-22 T 12-10-2018 M634_04330 4f9e79a5e232f1801e780e3a4e29fe15 783 SUPERFAMILY SSF55785 140 267 3.14E-25 T 12-10-2018 IPR035965 PAS domain superfamily M634_04330 4f9e79a5e232f1801e780e3a4e29fe15 783 Pfam PF01627 Hpt domain 694 765 6.4E-12 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 M634_04330 4f9e79a5e232f1801e780e3a4e29fe15 783 SMART SM00448 527 638 2.5E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_04330 4f9e79a5e232f1801e780e3a4e29fe15 783 SUPERFAMILY SSF47226 667 781 2.88E-29 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 M634_04330 4f9e79a5e232f1801e780e3a4e29fe15 783 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 507 6.5E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_04330 4f9e79a5e232f1801e780e3a4e29fe15 783 Gene3D G3DSA:1.10.287.130 268 345 1.7E-21 T 12-10-2018 M634_04330 4f9e79a5e232f1801e780e3a4e29fe15 783 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 507 9.8E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_04330 4f9e79a5e232f1801e780e3a4e29fe15 783 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 462 9.8E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_04330 4f9e79a5e232f1801e780e3a4e29fe15 783 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 488 9.8E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_04330 4f9e79a5e232f1801e780e3a4e29fe15 783 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 448 9.8E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_04330 4f9e79a5e232f1801e780e3a4e29fe15 783 SMART SM00387 394 510 1.3E-32 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_04330 4f9e79a5e232f1801e780e3a4e29fe15 783 Gene3D G3DSA:3.30.565.10 348 512 2.3E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_04330 4f9e79a5e232f1801e780e3a4e29fe15 783 Pfam PF08448 PAS fold 162 271 6.9E-19 T 12-10-2018 IPR013656 PAS fold-4 M634_04330 4f9e79a5e232f1801e780e3a4e29fe15 783 Pfam PF00072 Response regulator receiver domain 529 638 2.8E-18 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_04330 4f9e79a5e232f1801e780e3a4e29fe15 783 Gene3D G3DSA:1.10.287.970 1 89 4.2E-38 T 12-10-2018 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily M634_04330 4f9e79a5e232f1801e780e3a4e29fe15 783 Gene3D G3DSA:3.40.50.2300 523 646 3.6E-27 T 12-10-2018 M634_04330 4f9e79a5e232f1801e780e3a4e29fe15 783 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 276 6.5E-18 T 12-10-2018 IPR000014 PAS domain M634_04330 4f9e79a5e232f1801e780e3a4e29fe15 783 SUPERFAMILY SSF47384 270 347 2.16E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M634_04330 4f9e79a5e232f1801e780e3a4e29fe15 783 SUPERFAMILY SSF52172 527 642 2.7E-25 T 12-10-2018 IPR011006 CheY-like superfamily M634_04330 4f9e79a5e232f1801e780e3a4e29fe15 783 PIRSF PIRSF003182 1 783 0.0 T 12-10-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 M634_04330 4f9e79a5e232f1801e780e3a4e29fe15 783 SUPERFAMILY SSF55874 336 506 3.54E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_04330 4f9e79a5e232f1801e780e3a4e29fe15 783 SMART SM00388 282 347 9.8E-17 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_04330 4f9e79a5e232f1801e780e3a4e29fe15 783 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 345 1.9E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_04330 4f9e79a5e232f1801e780e3a4e29fe15 783 Gene3D G3DSA:1.20.120.160 667 783 7.3E-28 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 M634_00315 824cf05326eb4126af8b8f4fbb294164 425 Gene3D G3DSA:3.40.50.10380 7 170 8.6E-67 T 12-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 M634_00315 824cf05326eb4126af8b8f4fbb294164 425 SMART SM00919 173 409 1.0E-142 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 M634_00315 824cf05326eb4126af8b8f4fbb294164 425 SUPERFAMILY SSF53223 20 171 2.45E-52 T 12-10-2018 M634_00315 824cf05326eb4126af8b8f4fbb294164 425 SUPERFAMILY SSF51735 173 420 5.12E-81 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_00315 824cf05326eb4126af8b8f4fbb294164 425 ProSitePatterns PS00331 Malic enzymes signature. 169 185 - T 12-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 M634_00315 824cf05326eb4126af8b8f4fbb294164 425 PIRSF PIRSF000106 49 425 2.8E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 M634_00315 824cf05326eb4126af8b8f4fbb294164 425 Pfam PF00390 Malic enzyme, N-terminal domain 31 160 7.4E-27 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 M634_00315 824cf05326eb4126af8b8f4fbb294164 425 Pfam PF03949 Malic enzyme, NAD binding domain 175 365 2.3E-25 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 M634_00315 824cf05326eb4126af8b8f4fbb294164 425 SMART SM01274 28 161 6.0E-75 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 M634_00315 824cf05326eb4126af8b8f4fbb294164 425 Gene3D G3DSA:3.40.50.720 171 425 2.5E-83 T 12-10-2018 M634_03975 9838c1ae08ce22d72960f58f4c165814 160 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 129 1.3E-28 T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 M634_03975 9838c1ae08ce22d72960f58f4c165814 160 Gene3D G3DSA:3.30.70.560 1 153 3.4E-33 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 M634_03975 9838c1ae08ce22d72960f58f4c165814 160 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 129 2.1E-24 T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 M634_03975 9838c1ae08ce22d72960f58f4c165814 160 SUPERFAMILY SSF55083 1 148 5.75E-38 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 M634_16435 5916a5014e396d85b9d993f06a43ef41 325 Gene3D G3DSA:3.30.420.10 127 319 7.4E-15 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M634_16435 5916a5014e396d85b9d993f06a43ef41 325 Pfam PF00665 Integrase core domain 132 239 1.9E-19 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M634_16435 5916a5014e396d85b9d993f06a43ef41 325 Pfam PF13565 Homeodomain-like domain 34 108 1.1E-12 T 12-10-2018 M634_16435 5916a5014e396d85b9d993f06a43ef41 325 SUPERFAMILY SSF53098 132 291 1.39E-30 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M634_16435 5916a5014e396d85b9d993f06a43ef41 325 SUPERFAMILY SSF46689 6 110 3.23E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_09670 5862092cb434777179b93f9fa69be1f3 345 PIRSF PIRSF019574 1 345 2.3E-125 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 M634_09670 5862092cb434777179b93f9fa69be1f3 345 Pfam PF13416 Bacterial extracellular solute-binding protein 40 311 2.2E-43 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein M634_09670 5862092cb434777179b93f9fa69be1f3 345 SUPERFAMILY SSF53850 24 341 8.89E-94 T 12-10-2018 M634_09670 5862092cb434777179b93f9fa69be1f3 345 Gene3D G3DSA:3.40.190.10 129 318 1.7E-121 T 12-10-2018 M634_09670 5862092cb434777179b93f9fa69be1f3 345 Gene3D G3DSA:3.40.190.10 29 312 1.7E-121 T 12-10-2018 M634_09670 5862092cb434777179b93f9fa69be1f3 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 30 46 2.5E-85 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 M634_09670 5862092cb434777179b93f9fa69be1f3 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 89 102 2.5E-85 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 M634_09670 5862092cb434777179b93f9fa69be1f3 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 46 67 2.5E-85 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 M634_09670 5862092cb434777179b93f9fa69be1f3 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 290 316 2.5E-85 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 M634_09670 5862092cb434777179b93f9fa69be1f3 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 245 264 2.5E-85 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 M634_09670 5862092cb434777179b93f9fa69be1f3 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 146 160 2.5E-85 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 M634_09670 5862092cb434777179b93f9fa69be1f3 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 120 136 2.5E-85 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 M634_09670 5862092cb434777179b93f9fa69be1f3 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 164 183 2.5E-85 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 M634_09670 5862092cb434777179b93f9fa69be1f3 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 73 87 2.5E-85 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 M634_09670 5862092cb434777179b93f9fa69be1f3 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 201 220 2.5E-85 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 M634_01440 84fe130918c3d1dd704565d2b17c20eb 417 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 58 76 - T 12-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site M634_01440 84fe130918c3d1dd704565d2b17c20eb 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 78 90 2.3E-26 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 M634_01440 84fe130918c3d1dd704565d2b17c20eb 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 191 204 2.3E-26 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 M634_01440 84fe130918c3d1dd704565d2b17c20eb 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 370 383 2.3E-26 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 M634_01440 84fe130918c3d1dd704565d2b17c20eb 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 2.3E-26 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 M634_01440 84fe130918c3d1dd704565d2b17c20eb 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 58 76 2.3E-26 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 M634_01440 84fe130918c3d1dd704565d2b17c20eb 417 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 16 413 41.423 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 M634_01440 84fe130918c3d1dd704565d2b17c20eb 417 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 31 370 1.2E-26 T 12-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 M634_01440 84fe130918c3d1dd704565d2b17c20eb 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 165 174 3.4E-30 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 M634_01440 84fe130918c3d1dd704565d2b17c20eb 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 76 93 3.4E-30 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 M634_01440 84fe130918c3d1dd704565d2b17c20eb 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 380 402 3.4E-30 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 M634_01440 84fe130918c3d1dd704565d2b17c20eb 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 300 318 3.4E-30 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 M634_01440 84fe130918c3d1dd704565d2b17c20eb 417 SUPERFAMILY SSF50621 261 414 2.93E-53 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 M634_01440 84fe130918c3d1dd704565d2b17c20eb 417 Gene3D G3DSA:3.20.20.10 35 277 4.2E-153 T 12-10-2018 IPR029066 PLP-binding barrel M634_01440 84fe130918c3d1dd704565d2b17c20eb 417 Gene3D G3DSA:2.40.37.10 17 404 4.2E-153 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 M634_01440 84fe130918c3d1dd704565d2b17c20eb 417 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 5 412 5.8E-168 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 M634_01440 84fe130918c3d1dd704565d2b17c20eb 417 SUPERFAMILY SSF51419 27 284 9.74E-83 T 12-10-2018 IPR029066 PLP-binding barrel M634_01440 84fe130918c3d1dd704565d2b17c20eb 417 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 36 282 1.4E-70 T 12-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 M634_01940 ea0c1e80bc784e305d3aa542c7f5d952 453 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 451 1.7E-205 T 12-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 M634_01940 ea0c1e80bc784e305d3aa542c7f5d952 453 Gene3D G3DSA:3.90.550.10 1 224 5.1E-68 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M634_01940 ea0c1e80bc784e305d3aa542c7f5d952 453 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 400 428 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 M634_01940 ea0c1e80bc784e305d3aa542c7f5d952 453 SUPERFAMILY SSF53448 1 249 1.59E-63 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M634_01940 ea0c1e80bc784e305d3aa542c7f5d952 453 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 42.632 T 12-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 M634_01940 ea0c1e80bc784e305d3aa542c7f5d952 453 SUPERFAMILY SSF51161 252 434 1.14E-51 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily M634_01940 ea0c1e80bc784e305d3aa542c7f5d952 453 Gene3D G3DSA:2.160.10.10 225 453 9.3E-72 T 12-10-2018 M634_01940 ea0c1e80bc784e305d3aa542c7f5d952 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 314 348 3.0E-4 T 12-10-2018 IPR001451 Hexapeptide repeat M634_01940 ea0c1e80bc784e305d3aa542c7f5d952 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 392 426 1.7E-7 T 12-10-2018 IPR001451 Hexapeptide repeat M634_01940 ea0c1e80bc784e305d3aa542c7f5d952 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 265 296 9.1E-7 T 12-10-2018 IPR001451 Hexapeptide repeat M634_01940 ea0c1e80bc784e305d3aa542c7f5d952 453 Pfam PF12804 MobA-like NTP transferase domain 5 121 2.4E-22 T 12-10-2018 IPR025877 MobA-like NTP transferase M634_23400 68880592d18dd1d7455ad8aac611ae8b 200 Gene3D G3DSA:1.20.120.80 15 200 1.2E-57 T 12-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23400 68880592d18dd1d7455ad8aac611ae8b 200 Pfam PF00510 Cytochrome c oxidase subunit III 18 198 1.0E-16 T 12-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23400 68880592d18dd1d7455ad8aac611ae8b 200 SUPERFAMILY SSF81452 10 198 1.26E-58 T 12-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23400 68880592d18dd1d7455ad8aac611ae8b 200 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 21 200 4.3E-84 T 12-10-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 M634_09220 eb4dc4056fc54c3408252e23e3f9c719 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 82 5.1E-15 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_09220 eb4dc4056fc54c3408252e23e3f9c719 237 Gene3D G3DSA:1.20.120.530 81 231 6.5E-29 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal M634_09220 eb4dc4056fc54c3408252e23e3f9c719 237 SMART SM00345 24 82 1.1E-12 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_09220 eb4dc4056fc54c3408252e23e3f9c719 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 56 7.6E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_09220 eb4dc4056fc54c3408252e23e3f9c719 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 56 72 7.6E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_09220 eb4dc4056fc54c3408252e23e3f9c719 237 SMART SM00895 92 219 7.0E-24 T 12-10-2018 IPR011711 GntR, C-terminal M634_09220 eb4dc4056fc54c3408252e23e3f9c719 237 SUPERFAMILY SSF48008 89 224 1.8E-24 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal M634_09220 eb4dc4056fc54c3408252e23e3f9c719 237 Pfam PF07729 FCD domain 92 217 2.4E-26 T 12-10-2018 IPR011711 GntR, C-terminal M634_09220 eb4dc4056fc54c3408252e23e3f9c719 237 Gene3D G3DSA:1.10.10.10 3 80 3.6E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_09220 eb4dc4056fc54c3408252e23e3f9c719 237 SUPERFAMILY SSF46785 16 111 3.9E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_10275 773c616ae7d6430743619baf2c7c388e 309 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 31 290 2.4E-54 T 12-10-2018 M634_10275 773c616ae7d6430743619baf2c7c388e 309 Gene3D G3DSA:3.40.190.10 33 271 1.1E-29 T 12-10-2018 M634_10275 773c616ae7d6430743619baf2c7c388e 309 Gene3D G3DSA:3.40.190.10 116 240 1.1E-29 T 12-10-2018 M634_10275 773c616ae7d6430743619baf2c7c388e 309 SUPERFAMILY SSF53850 29 274 1.32E-18 T 12-10-2018 M634_23900 d86e216591d4c18b9157df2753e41739 342 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 6.3E-5 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 M634_23900 d86e216591d4c18b9157df2753e41739 342 PRINTS PR00183 E.coli/Salmonella-type porin signature 149 171 6.3E-5 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 M634_23900 d86e216591d4c18b9157df2753e41739 342 PRINTS PR00183 E.coli/Salmonella-type porin signature 93 115 6.3E-5 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 M634_23900 d86e216591d4c18b9157df2753e41739 342 PRINTS PR00183 E.coli/Salmonella-type porin signature 306 325 6.3E-5 T 12-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 M634_23900 d86e216591d4c18b9157df2753e41739 342 Gene3D G3DSA:2.40.160.10 22 342 3.0E-56 T 12-10-2018 IPR023614 Porin domain superfamily M634_23900 d86e216591d4c18b9157df2753e41739 342 SUPERFAMILY SSF56935 22 341 3.66E-54 T 12-10-2018 M634_23900 d86e216591d4c18b9157df2753e41739 342 Pfam PF13609 Gram-negative porin 8 325 1.6E-17 T 12-10-2018 M634_15095 19ad7d321869891c54ee6c4412dabac9 376 PIRSF PIRSF015658 1 376 3.1E-178 T 12-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 M634_15095 19ad7d321869891c54ee6c4412dabac9 376 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 370 1.0E-168 T 12-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 M634_15095 19ad7d321869891c54ee6c4412dabac9 376 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 374 1.6E-157 T 12-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 M634_19745 e707bdd12a80de0c7d88be96396a14ac 576 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 190 334 8.7E-20 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain M634_19745 e707bdd12a80de0c7d88be96396a14ac 576 Pfam PF12793 Sugar transport-related sRNA regulator N-term 36 133 5.9E-18 T 12-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain M634_19745 e707bdd12a80de0c7d88be96396a14ac 576 SUPERFAMILY SSF53850 146 572 1.48E-46 T 12-10-2018 M634_19745 e707bdd12a80de0c7d88be96396a14ac 576 Gene3D G3DSA:3.40.190.10 136 398 2.4E-33 T 12-10-2018 M634_03620 f8e2fa0ab0d904fabfdeaf7445fc8729 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.3E-44 T 12-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03620 f8e2fa0ab0d904fabfdeaf7445fc8729 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 12-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_03620 f8e2fa0ab0d904fabfdeaf7445fc8729 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.361 T 12-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03620 f8e2fa0ab0d904fabfdeaf7445fc8729 103 SUPERFAMILY SSF141091 1 102 2.35E-38 T 12-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03620 f8e2fa0ab0d904fabfdeaf7445fc8729 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 7.0E-40 T 12-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_12610 f0d4278797dba162663cbc958200311c 398 Pfam PF00871 Acetokinase family 5 390 5.5E-169 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 M634_12610 f0d4278797dba162663cbc958200311c 398 SUPERFAMILY SSF53067 156 395 1.02E-85 T 12-10-2018 M634_12610 f0d4278797dba162663cbc958200311c 398 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 M634_12610 f0d4278797dba162663cbc958200311c 398 PRINTS PR00471 Acetate kinase family signature 172 185 2.5E-45 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 M634_12610 f0d4278797dba162663cbc958200311c 398 PRINTS PR00471 Acetate kinase family signature 377 389 2.5E-45 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 M634_12610 f0d4278797dba162663cbc958200311c 398 PRINTS PR00471 Acetate kinase family signature 298 311 2.5E-45 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 M634_12610 f0d4278797dba162663cbc958200311c 398 PRINTS PR00471 Acetate kinase family signature 321 337 2.5E-45 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 M634_12610 f0d4278797dba162663cbc958200311c 398 PRINTS PR00471 Acetate kinase family signature 202 223 2.5E-45 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 M634_12610 f0d4278797dba162663cbc958200311c 398 PRINTS PR00471 Acetate kinase family signature 5 16 2.5E-45 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 M634_12610 f0d4278797dba162663cbc958200311c 398 PIRSF PIRSF000722 1 397 4.5E-149 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 M634_12610 f0d4278797dba162663cbc958200311c 398 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 M634_12610 f0d4278797dba162663cbc958200311c 398 SUPERFAMILY SSF53067 3 195 5.63E-66 T 12-10-2018 M634_12610 f0d4278797dba162663cbc958200311c 398 Gene3D G3DSA:3.30.420.40 2 194 1.3E-75 T 12-10-2018 M634_12610 f0d4278797dba162663cbc958200311c 398 Hamap MF_00020 Acetate kinase [ackA]. 1 398 191.225 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 M634_12610 f0d4278797dba162663cbc958200311c 398 Gene3D G3DSA:3.30.420.40 195 397 4.2E-83 T 12-10-2018 M634_12610 f0d4278797dba162663cbc958200311c 398 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 1.1E-174 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 M634_10235 cc4d0a30b57f58f39367e14ab89a07ea 231 PIRSF PIRSF006324 20 229 1.3E-56 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 M634_10235 cc4d0a30b57f58f39367e14ab89a07ea 231 Pfam PF01810 LysE type translocator 35 228 3.6E-33 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 M634_23065 a39b2c838b786aea8ad19d3e586a6282 321 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 11 306 5.3E-62 T 12-10-2018 IPR010732 Type VI secretion, TssG-like M634_23065 a39b2c838b786aea8ad19d3e586a6282 321 Pfam PF06996 Type VI secretion, TssG 11 306 1.1E-69 T 12-10-2018 IPR010732 Type VI secretion, TssG-like M634_14920 4accf3212c40fbe61890b7b83f1250c2 301 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 3.0E-100 T 12-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 M634_14920 4accf3212c40fbe61890b7b83f1250c2 301 Gene3D G3DSA:3.30.1300.10 181 283 5.2E-26 T 12-10-2018 M634_14920 4accf3212c40fbe61890b7b83f1250c2 301 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 40.105 T 12-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 M634_14920 4accf3212c40fbe61890b7b83f1250c2 301 Gene3D G3DSA:3.40.50.620 1 179 4.6E-80 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M634_14920 4accf3212c40fbe61890b7b83f1250c2 301 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 281 8.7E-103 T 12-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 M634_14920 4accf3212c40fbe61890b7b83f1250c2 301 SUPERFAMILY SSF52374 1 280 2.82E-106 T 12-10-2018 M634_14920 4accf3212c40fbe61890b7b83f1250c2 301 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 24 63 8.9E-9 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 M634_20635 6428d68af646a1db8f30aaed37e67383 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 348 2.9E-169 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 M634_20635 6428d68af646a1db8f30aaed37e67383 350 SUPERFAMILY SSF51569 6 347 3.14E-137 T 12-10-2018 M634_20635 6428d68af646a1db8f30aaed37e67383 350 Pfam PF00793 DAHP synthetase I family 38 337 3.7E-105 T 12-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 M634_20635 6428d68af646a1db8f30aaed37e67383 350 Gene3D G3DSA:3.20.20.70 1 349 2.3E-165 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_20635 6428d68af646a1db8f30aaed37e67383 350 PIRSF PIRSF001361 1 350 3.7E-162 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 M634_07600 cad50155dcef87063f59ff73a04517af 318 SUPERFAMILY SSF52540 23 261 8.64E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_07600 cad50155dcef87063f59ff73a04517af 318 Gene3D G3DSA:3.40.50.300 9 193 1.2E-60 T 12-10-2018 M634_07600 cad50155dcef87063f59ff73a04517af 318 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 233 242 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site M634_07600 cad50155dcef87063f59ff73a04517af 318 Pfam PF02954 Bacterial regulatory protein, Fis family 274 314 4.3E-12 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M634_07600 cad50155dcef87063f59ff73a04517af 318 SUPERFAMILY SSF46689 233 317 2.82E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_07600 cad50155dcef87063f59ff73a04517af 318 Gene3D G3DSA:1.10.8.60 194 257 3.7E-21 T 12-10-2018 M634_07600 cad50155dcef87063f59ff73a04517af 318 Pfam PF00158 Sigma-54 interaction domain 23 189 1.0E-65 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 M634_07600 cad50155dcef87063f59ff73a04517af 318 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 297 317 7.9E-10 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M634_07600 cad50155dcef87063f59ff73a04517af 318 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 280 297 7.9E-10 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M634_07600 cad50155dcef87063f59ff73a04517af 318 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 109 124 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M634_07600 cad50155dcef87063f59ff73a04517af 318 SMART SM00382 43 187 3.8E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_07600 cad50155dcef87063f59ff73a04517af 318 Gene3D G3DSA:1.10.10.60 266 318 6.4E-15 T 12-10-2018 M634_13520 fbed331714efcb2e5aa6e1c5604154f0 163 Pfam PF10975 Protein of unknown function (DUF2802) 68 135 7.0E-23 T 12-10-2018 IPR021244 Protein of unknown function DUF2802 M634_07175 66fdf038edc49c56aa1c456928c1b50d 248 Gene3D G3DSA:1.10.10.2250 8 85 3.7E-34 T 12-10-2018 M634_07175 66fdf038edc49c56aa1c456928c1b50d 248 Gene3D G3DSA:1.10.10.2260 95 201 2.5E-49 T 12-10-2018 M634_07175 66fdf038edc49c56aa1c456928c1b50d 248 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 17 245 49.633 T 12-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 M634_07175 66fdf038edc49c56aa1c456928c1b50d 248 Pfam PF04288 MukE-like family 17 241 2.8E-118 T 12-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 M634_20300 a2696550d1cebd183add3b950ea9de31 199 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 M634_20300 a2696550d1cebd183add3b950ea9de31 199 Gene3D G3DSA:3.40.30.10 17 199 8.1E-52 T 12-10-2018 M634_20300 a2696550d1cebd183add3b950ea9de31 199 Pfam PF01323 DSBA-like thioredoxin domain 40 179 2.6E-21 T 12-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 M634_20300 a2696550d1cebd183add3b950ea9de31 199 PIRSF PIRSF001488 1 199 1.1E-63 T 12-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL M634_20300 a2696550d1cebd183add3b950ea9de31 199 SUPERFAMILY SSF52833 20 197 1.77E-44 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M634_01240 c2c37359ebf11296fe5c038101497f75 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 457 5.7E-30 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 M634_01240 c2c37359ebf11296fe5c038101497f75 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 1.3E-58 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 M634_01240 c2c37359ebf11296fe5c038101497f75 466 SUPERFAMILY SSF55424 345 463 1.89E-30 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 M634_01240 c2c37359ebf11296fe5c038101497f75 466 PIRSF PIRSF000350 2 463 2.7E-69 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 M634_01240 c2c37359ebf11296fe5c038101497f75 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 4.9E-28 T 12-10-2018 M634_01240 c2c37359ebf11296fe5c038101497f75 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 4.9E-28 T 12-10-2018 M634_01240 c2c37359ebf11296fe5c038101497f75 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 4.9E-28 T 12-10-2018 M634_01240 c2c37359ebf11296fe5c038101497f75 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 4.9E-28 T 12-10-2018 M634_01240 c2c37359ebf11296fe5c038101497f75 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 4.9E-28 T 12-10-2018 M634_01240 c2c37359ebf11296fe5c038101497f75 466 Gene3D G3DSA:3.50.50.60 7 333 1.1E-92 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_01240 c2c37359ebf11296fe5c038101497f75 466 Gene3D G3DSA:3.30.390.30 345 464 7.6E-33 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 M634_01240 c2c37359ebf11296fe5c038101497f75 466 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 2 466 65.571 T 12-10-2018 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 M634_01240 c2c37359ebf11296fe5c038101497f75 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 3.6E-52 T 12-10-2018 M634_01240 c2c37359ebf11296fe5c038101497f75 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 3.6E-52 T 12-10-2018 M634_01240 c2c37359ebf11296fe5c038101497f75 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 3.6E-52 T 12-10-2018 M634_01240 c2c37359ebf11296fe5c038101497f75 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 3.6E-52 T 12-10-2018 M634_01240 c2c37359ebf11296fe5c038101497f75 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 3.6E-52 T 12-10-2018 M634_01240 c2c37359ebf11296fe5c038101497f75 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 3.6E-52 T 12-10-2018 M634_01240 c2c37359ebf11296fe5c038101497f75 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 3.6E-52 T 12-10-2018 M634_01240 c2c37359ebf11296fe5c038101497f75 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 3.6E-52 T 12-10-2018 M634_01240 c2c37359ebf11296fe5c038101497f75 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 3.6E-52 T 12-10-2018 M634_01240 c2c37359ebf11296fe5c038101497f75 466 Gene3D G3DSA:3.50.50.60 158 276 1.1E-92 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_01240 c2c37359ebf11296fe5c038101497f75 466 SUPERFAMILY SSF51905 5 319 1.39E-55 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_24560 44d7a8d75360ac935f6ec4d4a0bd209d 567 Pfam PF01979 Amidohydrolase family 125 453 5.7E-83 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 M634_24560 44d7a8d75360ac935f6ec4d4a0bd209d 567 ProSitePatterns PS00145 Urease active site. 317 333 - T 12-10-2018 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 M634_24560 44d7a8d75360ac935f6ec4d4a0bd209d 567 Gene3D G3DSA:2.30.40.10 4 480 1.9E-294 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 M634_24560 44d7a8d75360ac935f6ec4d4a0bd209d 567 SUPERFAMILY SSF51556 130 567 6.81E-195 T 12-10-2018 IPR032466 Metal-dependent hydrolase M634_24560 44d7a8d75360ac935f6ec4d4a0bd209d 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 427 440 1.4E-34 T 12-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 M634_24560 44d7a8d75360ac935f6ec4d4a0bd209d 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 334 350 1.4E-34 T 12-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 M634_24560 44d7a8d75360ac935f6ec4d4a0bd209d 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 295 312 1.4E-34 T 12-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 M634_24560 44d7a8d75360ac935f6ec4d4a0bd209d 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 401 416 1.4E-34 T 12-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 M634_24560 44d7a8d75360ac935f6ec4d4a0bd209d 567 ProSitePatterns PS01120 Urease nickel ligands signature. 127 140 - T 12-10-2018 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 M634_24560 44d7a8d75360ac935f6ec4d4a0bd209d 567 Pfam PF00449 Urease alpha-subunit, N-terminal domain 3 119 1.2E-55 T 12-10-2018 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 M634_24560 44d7a8d75360ac935f6ec4d4a0bd209d 567 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 3 567 1.6E-290 T 12-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 M634_24560 44d7a8d75360ac935f6ec4d4a0bd209d 567 Hamap MF_01953 Urease subunit alpha [ureC]. 2 567 56.825 T 12-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 M634_24560 44d7a8d75360ac935f6ec4d4a0bd209d 567 SUPERFAMILY SSF51338 3 474 1.76E-62 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 M634_24560 44d7a8d75360ac935f6ec4d4a0bd209d 567 Gene3D G3DSA:3.20.20.140 129 567 1.9E-294 T 12-10-2018 M634_03935 559a01d407bf0f0177dd5776985f09e0 620 Gene3D G3DSA:1.10.10.10 459 535 2.6E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_03935 559a01d407bf0f0177dd5776985f09e0 620 Pfam PF04546 Sigma-70, non-essential region 139 355 6.8E-67 T 12-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 M634_03935 559a01d407bf0f0177dd5776985f09e0 620 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 382 618 2.2E-120 T 12-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 M634_03935 559a01d407bf0f0177dd5776985f09e0 620 Pfam PF04539 Sigma-70 region 3 465 540 1.3E-28 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 M634_03935 559a01d407bf0f0177dd5776985f09e0 620 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 579 605 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M634_03935 559a01d407bf0f0177dd5776985f09e0 620 PRINTS PR00046 Major sigma-70 factor signature 434 442 3.2E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M634_03935 559a01d407bf0f0177dd5776985f09e0 620 PRINTS PR00046 Major sigma-70 factor signature 594 605 3.2E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M634_03935 559a01d407bf0f0177dd5776985f09e0 620 PRINTS PR00046 Major sigma-70 factor signature 558 570 3.2E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M634_03935 559a01d407bf0f0177dd5776985f09e0 620 PRINTS PR00046 Major sigma-70 factor signature 410 423 3.2E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M634_03935 559a01d407bf0f0177dd5776985f09e0 620 PRINTS PR00046 Major sigma-70 factor signature 579 594 3.2E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M634_03935 559a01d407bf0f0177dd5776985f09e0 620 Gene3D G3DSA:1.10.601.10 113 455 5.4E-139 T 12-10-2018 M634_03935 559a01d407bf0f0177dd5776985f09e0 620 Gene3D G3DSA:1.10.220.120 1 64 2.5E-29 T 12-10-2018 M634_03935 559a01d407bf0f0177dd5776985f09e0 620 SUPERFAMILY SSF88659 459 532 2.22E-20 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like M634_03935 559a01d407bf0f0177dd5776985f09e0 620 Pfam PF03979 Sigma-70 factor, region 1.1 4 80 3.0E-28 T 12-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 M634_03935 559a01d407bf0f0177dd5776985f09e0 620 Pfam PF04542 Sigma-70 region 2 386 455 1.7E-21 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 M634_03935 559a01d407bf0f0177dd5776985f09e0 620 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 1.3E-12 T 12-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 M634_03935 559a01d407bf0f0177dd5776985f09e0 620 SUPERFAMILY SSF88946 115 453 1.57E-95 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 M634_03935 559a01d407bf0f0177dd5776985f09e0 620 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 410 423 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 M634_03935 559a01d407bf0f0177dd5776985f09e0 620 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 382 607 6.0E-38 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 M634_03935 559a01d407bf0f0177dd5776985f09e0 620 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 619 45.744 T 12-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 M634_03935 559a01d407bf0f0177dd5776985f09e0 620 Pfam PF04545 Sigma-70, region 4 554 607 1.8E-19 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 M634_03935 559a01d407bf0f0177dd5776985f09e0 620 SUPERFAMILY SSF88659 516 618 9.38E-26 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like M634_03935 559a01d407bf0f0177dd5776985f09e0 620 Gene3D G3DSA:1.10.10.10 536 620 1.3E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_12515 00b9d7ecc17cdf39e9d32781943013a8 519 Pfam PF00916 Sulfate permease family 13 374 1.3E-57 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 M634_12515 00b9d7ecc17cdf39e9d32781943013a8 519 SUPERFAMILY SSF52091 416 498 2.35E-11 T 12-10-2018 IPR036513 STAS domain superfamily M634_12515 00b9d7ecc17cdf39e9d32781943013a8 519 Gene3D G3DSA:3.30.750.24 409 499 3.9E-26 T 12-10-2018 IPR036513 STAS domain superfamily M634_12515 00b9d7ecc17cdf39e9d32781943013a8 519 Pfam PF01740 STAS domain 417 503 2.6E-6 T 12-10-2018 IPR002645 STAS domain M634_21035 5e6b16ff881fb1cb15a64fd84cd97385 320 Gene3D G3DSA:1.10.760.10 46 175 3.4E-83 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_21035 5e6b16ff881fb1cb15a64fd84cd97385 320 SUPERFAMILY SSF46626 179 312 2.87E-31 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_21035 5e6b16ff881fb1cb15a64fd84cd97385 320 Pfam PF03150 Di-haem cytochrome c peroxidase 45 187 4.8E-33 T 12-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 M634_21035 5e6b16ff881fb1cb15a64fd84cd97385 320 Gene3D G3DSA:1.10.760.10 176 307 3.4E-83 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_21035 5e6b16ff881fb1cb15a64fd84cd97385 320 PIRSF PIRSF000294 8 316 6.6E-74 T 12-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 M634_21035 5e6b16ff881fb1cb15a64fd84cd97385 320 Pfam PF00034 Cytochrome c 196 306 9.2E-6 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_21035 5e6b16ff881fb1cb15a64fd84cd97385 320 SUPERFAMILY SSF46626 28 177 9.96E-34 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_15510 a73aca0141407ee70a26b5a7eef476ec 96 SUPERFAMILY SSF69786 3 96 5.62E-32 T 12-10-2018 IPR036591 YggU-like superfamily M634_15510 a73aca0141407ee70a26b5a7eef476ec 96 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 8 91 1.2E-26 T 12-10-2018 IPR005228 Conserved hypothetical protein CHP00251 M634_15510 a73aca0141407ee70a26b5a7eef476ec 96 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 12 83 2.2E-25 T 12-10-2018 IPR003746 Protein of unknown function DUF167 M634_15510 a73aca0141407ee70a26b5a7eef476ec 96 SMART SM01152 8 84 8.2E-39 T 12-10-2018 IPR003746 Protein of unknown function DUF167 M634_15510 a73aca0141407ee70a26b5a7eef476ec 96 Hamap MF_00634 UPF0235 protein YggU [yggU]. 8 96 20.511 T 12-10-2018 IPR003746 Protein of unknown function DUF167 M634_15510 a73aca0141407ee70a26b5a7eef476ec 96 Gene3D G3DSA:3.30.1200.10 1 96 1.7E-34 T 12-10-2018 IPR036591 YggU-like superfamily M634_19485 e8c50db8fba6cd788f1087a7d195dfe7 120 PIRSF PIRSF002889 1 120 1.0E-33 T 12-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 M634_19485 e8c50db8fba6cd788f1087a7d195dfe7 120 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 118 2.2E-34 T 12-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 M634_19485 e8c50db8fba6cd788f1087a7d195dfe7 120 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site M634_19485 e8c50db8fba6cd788f1087a7d195dfe7 120 Pfam PF00460 Flagella basal body rod protein 11 38 2.7E-7 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 M634_19490 135f7649ef7684c6aaf703914d0f0e1f 144 Pfam PF00460 Flagella basal body rod protein 11 32 1.2E-5 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 M634_19490 135f7649ef7684c6aaf703914d0f0e1f 144 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 96 140 1.5E-8 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain M634_19490 135f7649ef7684c6aaf703914d0f0e1f 144 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 7 142 6.2E-40 T 12-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 M634_21635 6496276c82870470119357b66656e869 388 SMART SM00052 137 379 4.1E-65 T 12-10-2018 IPR001633 EAL domain M634_21635 6496276c82870470119357b66656e869 388 Pfam PF00563 EAL domain 148 374 8.1E-66 T 12-10-2018 IPR001633 EAL domain M634_21635 6496276c82870470119357b66656e869 388 SUPERFAMILY SSF52172 4 127 9.25E-22 T 12-10-2018 IPR011006 CheY-like superfamily M634_21635 6496276c82870470119357b66656e869 388 Gene3D G3DSA:3.40.50.2300 4 133 3.4E-23 T 12-10-2018 M634_21635 6496276c82870470119357b66656e869 388 SMART SM00448 5 121 4.4E-10 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_21635 6496276c82870470119357b66656e869 388 Gene3D G3DSA:3.20.20.450 137 382 2.8E-75 T 12-10-2018 IPR035919 EAL domain superfamily M634_21635 6496276c82870470119357b66656e869 388 SUPERFAMILY SSF141868 144 382 9.02E-73 T 12-10-2018 IPR035919 EAL domain superfamily M634_21635 6496276c82870470119357b66656e869 388 Pfam PF00072 Response regulator receiver domain 7 119 1.1E-18 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_08165 1996db477d0f3e403ee04b14d04dfaa8 411 SUPERFAMILY SSF53383 3 410 1.28E-97 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_08165 1996db477d0f3e403ee04b14d04dfaa8 411 Pfam PF00266 Aminotransferase class-V 26 401 6.5E-69 T 12-10-2018 IPR000192 Aminotransferase class V domain M634_08165 1996db477d0f3e403ee04b14d04dfaa8 411 TIGRFAM TIGR01976 am_tr_V_VC1184: cysteine desulfurase family protein 3 404 6.7E-166 T 12-10-2018 IPR011340 Cysteine desulfurase-related M634_08165 1996db477d0f3e403ee04b14d04dfaa8 411 Gene3D G3DSA:3.90.1150.10 24 405 1.8E-135 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M634_08165 1996db477d0f3e403ee04b14d04dfaa8 411 Gene3D G3DSA:3.40.640.10 33 289 1.8E-135 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_08070 217b85d1e6be7706b275e5f87931f42f 560 Gene3D G3DSA:3.30.70.1450 229 288 1.8E-9 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 M634_08070 217b85d1e6be7706b275e5f87931f42f 560 Pfam PF06826 Predicted Permease Membrane Region 389 557 9.8E-43 T 12-10-2018 IPR006512 YidE/YbjL duplication M634_08070 217b85d1e6be7706b275e5f87931f42f 560 Pfam PF06826 Predicted Permease Membrane Region 17 185 2.5E-36 T 12-10-2018 IPR006512 YidE/YbjL duplication M634_08070 217b85d1e6be7706b275e5f87931f42f 560 SUPERFAMILY SSF116726 294 377 5.36E-10 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 M634_08070 217b85d1e6be7706b275e5f87931f42f 560 Pfam PF02080 TrkA-C domain 232 281 2.2E-8 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 M634_08070 217b85d1e6be7706b275e5f87931f42f 560 Pfam PF02080 TrkA-C domain 309 374 1.5E-9 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 M634_08070 217b85d1e6be7706b275e5f87931f42f 560 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 560 58.113 T 12-10-2018 IPR023017 Transport protein YbjL, putative M634_08070 217b85d1e6be7706b275e5f87931f42f 560 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 393 544 2.1E-37 T 12-10-2018 IPR006512 YidE/YbjL duplication M634_08070 217b85d1e6be7706b275e5f87931f42f 560 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 172 7.3E-28 T 12-10-2018 IPR006512 YidE/YbjL duplication M634_08070 217b85d1e6be7706b275e5f87931f42f 560 SUPERFAMILY SSF116726 231 285 2.75E-10 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 M634_24055 a7606cd954b5c88eed694e2b031f4217 177 Pfam PF01161 Phosphatidylethanolamine-binding protein 41 175 5.0E-35 T 12-10-2018 IPR008914 Phosphatidylethanolamine-binding protein M634_24055 a7606cd954b5c88eed694e2b031f4217 177 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 40 175 5.8E-38 T 12-10-2018 IPR005247 YbhB/YbcL M634_24055 a7606cd954b5c88eed694e2b031f4217 177 Gene3D G3DSA:3.90.280.10 12 177 3.6E-51 T 12-10-2018 IPR036610 PEBP-like superfamily M634_24055 a7606cd954b5c88eed694e2b031f4217 177 SUPERFAMILY SSF49777 22 177 3.66E-47 T 12-10-2018 IPR036610 PEBP-like superfamily M634_22640 87c31225bc5a6ab688b413d62401be4c 461 Pfam PF01554 MatE 249 411 5.7E-16 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M634_22640 87c31225bc5a6ab688b413d62401be4c 461 Pfam PF01554 MatE 22 180 1.2E-34 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M634_22640 87c31225bc5a6ab688b413d62401be4c 461 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 421 2.4E-52 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M634_22640 87c31225bc5a6ab688b413d62401be4c 461 PIRSF PIRSF006603 2 460 8.4E-69 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M634_10470 0dded951e483bf42e799860b2f19f65b 531 Gene3D G3DSA:1.10.20.110 42 407 1.9E-199 T 12-10-2018 M634_10470 0dded951e483bf42e799860b2f19f65b 531 SUPERFAMILY SSF53383 133 525 3.38E-44 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_10470 0dded951e483bf42e799860b2f19f65b 531 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 315 328 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 M634_10470 0dded951e483bf42e799860b2f19f65b 531 Pfam PF00155 Aminotransferase class I and II 179 512 4.0E-25 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 M634_10470 0dded951e483bf42e799860b2f19f65b 531 Gene3D G3DSA:3.40.640.10 166 385 1.9E-199 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_10470 0dded951e483bf42e799860b2f19f65b 531 Gene3D G3DSA:3.90.1150.10 35 527 1.9E-199 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M634_10470 0dded951e483bf42e799860b2f19f65b 531 TIGRFAM TIGR03801 asp_4_decarbox: aspartate 4-decarboxylase 16 529 3.5E-220 T 12-10-2018 IPR022518 Aspartate 4-decarboxylase KEGG: 00220+2.6.1.1|KEGG: 00250+4.1.1.12+2.6.1.1|KEGG: 00270+4.1.1.12+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 M634_24365 4485fe8aa5a0852d07db45359ea07153 153 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 1.8E-4 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M634_24365 4485fe8aa5a0852d07db45359ea07153 153 SUPERFAMILY SSF46689 1 74 8.72E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_24365 4485fe8aa5a0852d07db45359ea07153 153 Gene3D G3DSA:1.10.10.60 2 60 4.3E-8 T 12-10-2018 M634_24365 4485fe8aa5a0852d07db45359ea07153 153 Gene3D G3DSA:1.20.5.830 111 153 3.9E-29 T 12-10-2018 IPR027402 LuxT regulator, C-terminal domain superfamily M634_24365 4485fe8aa5a0852d07db45359ea07153 153 Gene3D G3DSA:1.10.287.790 61 110 2.0E-32 T 12-10-2018 IPR027404 LuxT regulator, helix hairpin domain superfamily M634_14445 70af0fb1d5dc27d6057d5276f2624797 402 Gene3D G3DSA:3.40.50.300 150 386 1.3E-41 T 12-10-2018 M634_14445 70af0fb1d5dc27d6057d5276f2624797 402 SUPERFAMILY SSF52540 152 384 9.69E-29 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_14445 70af0fb1d5dc27d6057d5276f2624797 402 Pfam PF13614 AAA domain 153 306 5.6E-10 T 12-10-2018 IPR025669 AAA domain M634_02905 ef909cf0db628b54a548f19c47f09a94 288 Pfam PF08340 Domain of unknown function (DUF1732) 204 288 1.5E-34 T 12-10-2018 IPR013551 Domain of unknown function DUF1732 M634_02905 ef909cf0db628b54a548f19c47f09a94 288 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 288 3.0E-118 T 12-10-2018 IPR005229 Conserved hypothetical protein CHP00255 M634_02905 ef909cf0db628b54a548f19c47f09a94 288 Pfam PF03755 YicC-like family, N-terminal region 2 154 6.1E-44 T 12-10-2018 IPR013527 YicC-like, N-terminal M634_11420 dab7f012eea1be7d081509006c8a0988 407 Pfam PF13252 Protein of unknown function (DUF4043) 53 400 2.6E-116 T 12-10-2018 IPR025267 Protein of unknown function DUF4043 M634_11420 dab7f012eea1be7d081509006c8a0988 407 TIGRFAM TIGR04387 capsid_maj_N4: major capsid protein, N4-gp56 family 58 372 2.2E-18 T 12-10-2018 M634_12670 ee91e78910969f20db8dd97f33af3b42 170 PIRSF PIRSF006443 1 166 5.7E-67 T 12-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 M634_12670 ee91e78910969f20db8dd97f33af3b42 170 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 7 168 1.8E-85 T 12-10-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 M634_12670 ee91e78910969f20db8dd97f33af3b42 170 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 72 85 - T 12-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 M634_12670 ee91e78910969f20db8dd97f33af3b42 170 SUPERFAMILY SSF53218 7 168 1.44E-47 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily M634_12670 ee91e78910969f20db8dd97f33af3b42 170 Gene3D G3DSA:3.40.980.10 2 170 2.8E-52 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily M634_12670 ee91e78910969f20db8dd97f33af3b42 170 Pfam PF00994 Probable molybdopterin binding domain 14 156 8.1E-35 T 12-10-2018 IPR001453 MoaB/Mog domain M634_12670 ee91e78910969f20db8dd97f33af3b42 170 SMART SM00852 14 158 3.0E-28 T 12-10-2018 IPR001453 MoaB/Mog domain M634_12670 ee91e78910969f20db8dd97f33af3b42 170 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 12 152 1.3E-37 T 12-10-2018 IPR001453 MoaB/Mog domain M634_13135 0a6cdf15dd0c9ff8218214668e224ba4 238 Pfam PF05944 Phage small terminase subunit 37 167 3.3E-38 T 12-10-2018 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 M634_21480 54e4c851492b5aa6455a3c80e3e1dc48 383 Gene3D G3DSA:2.40.37.20 19 368 6.0E-110 T 12-10-2018 M634_21480 54e4c851492b5aa6455a3c80e3e1dc48 383 Pfam PF01168 Alanine racemase, N-terminal domain 25 246 5.0E-26 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M634_21480 54e4c851492b5aa6455a3c80e3e1dc48 383 Pfam PF14031 Putative serine dehydratase domain 265 366 7.1E-21 T 12-10-2018 IPR026956 D-serine dehydratase-like domain M634_21480 54e4c851492b5aa6455a3c80e3e1dc48 383 Gene3D G3DSA:3.20.20.10 26 247 6.0E-110 T 12-10-2018 IPR029066 PLP-binding barrel M634_21480 54e4c851492b5aa6455a3c80e3e1dc48 383 SMART SM01119 265 368 2.5E-30 T 12-10-2018 IPR026956 D-serine dehydratase-like domain M634_21480 54e4c851492b5aa6455a3c80e3e1dc48 383 SUPERFAMILY SSF51419 25 257 9.49E-29 T 12-10-2018 IPR029066 PLP-binding barrel M634_19480 43ef63ff81ec355ab4a2078b965cab52 265 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 129 264 6.3E-39 T 12-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal M634_19480 43ef63ff81ec355ab4a2078b965cab52 265 Gene3D G3DSA:2.30.30.760 206 265 1.9E-12 T 12-10-2018 M634_19480 43ef63ff81ec355ab4a2078b965cab52 265 Pfam PF13144 Chaperone for flagella basal body P-ring formation 91 261 6.5E-43 T 12-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal M634_19480 43ef63ff81ec355ab4a2078b965cab52 265 SMART SM00858 141 202 4.0E-6 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 M634_19480 43ef63ff81ec355ab4a2078b965cab52 265 Gene3D G3DSA:3.90.1210.10 141 205 5.1E-5 T 12-10-2018 M634_07305 b60cb8b9fcba3f2d0a8493eecd5ffb97 353 Gene3D G3DSA:3.40.50.10800 115 340 9.1E-94 T 12-10-2018 M634_07305 b60cb8b9fcba3f2d0a8493eecd5ffb97 353 Gene3D G3DSA:3.40.50.10800 32 322 9.1E-94 T 12-10-2018 M634_07305 b60cb8b9fcba3f2d0a8493eecd5ffb97 353 SUPERFAMILY SSF142754 29 341 1.07E-105 T 12-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 M634_07305 b60cb8b9fcba3f2d0a8493eecd5ffb97 353 Pfam PF02445 Quinolinate synthetase A protein 32 340 1.1E-101 T 12-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 M634_07305 b60cb8b9fcba3f2d0a8493eecd5ffb97 353 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 29 341 2.5E-114 T 12-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 M634_07305 b60cb8b9fcba3f2d0a8493eecd5ffb97 353 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 66.399 T 12-10-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 M634_07305 b60cb8b9fcba3f2d0a8493eecd5ffb97 353 Gene3D G3DSA:3.40.50.10800 200 295 9.1E-94 T 12-10-2018 M634_05360 404066f0bb7e974bf8325b596a26efac 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 15.199 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 M634_05360 404066f0bb7e974bf8325b596a26efac 80 Gene3D G3DSA:1.10.287.1040 4 80 1.6E-22 T 12-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 M634_05360 404066f0bb7e974bf8325b596a26efac 80 Pfam PF02609 Exonuclease VII small subunit 11 61 4.4E-18 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 M634_05360 404066f0bb7e974bf8325b596a26efac 80 PIRSF PIRSF006488 1 80 9.0E-21 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 M634_05360 404066f0bb7e974bf8325b596a26efac 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 50 6.0E-22 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 M634_05360 404066f0bb7e974bf8325b596a26efac 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 65 1.2E-20 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 M634_05360 404066f0bb7e974bf8325b596a26efac 80 SUPERFAMILY SSF116842 2 72 9.29E-21 T 12-10-2018 M634_24315 a6f159a48792b4cfbd02d8475ee9df71 178 SUPERFAMILY SSF89028 7 169 2.16E-36 T 12-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 M634_24315 a6f159a48792b4cfbd02d8475ee9df71 178 Gene3D G3DSA:1.20.1200.10 17 173 2.4E-22 T 12-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 M634_24315 a6f159a48792b4cfbd02d8475ee9df71 178 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 28 149 2.0E-66 T 12-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 M634_24315 a6f159a48792b4cfbd02d8475ee9df71 178 Pfam PF01923 Cobalamin adenosyltransferase 19 156 3.4E-14 T 12-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 M634_18115 6e800de1708cd2b0565b28bff1a268a9 637 SMART SM00052 403 635 1.4E-10 T 12-10-2018 IPR001633 EAL domain M634_18115 6e800de1708cd2b0565b28bff1a268a9 637 Pfam PF00563 EAL domain 411 635 4.8E-40 T 12-10-2018 IPR001633 EAL domain M634_18115 6e800de1708cd2b0565b28bff1a268a9 637 Gene3D G3DSA:3.20.20.450 401 636 8.9E-41 T 12-10-2018 IPR035919 EAL domain superfamily M634_18115 6e800de1708cd2b0565b28bff1a268a9 637 Gene3D G3DSA:3.30.1040.50 102 151 6.9E-18 T 12-10-2018 M634_18115 6e800de1708cd2b0565b28bff1a268a9 637 Pfam PF00990 Diguanylate cyclase, GGDEF domain 237 386 2.5E-13 T 12-10-2018 IPR000160 GGDEF domain M634_18115 6e800de1708cd2b0565b28bff1a268a9 637 SUPERFAMILY SSF141868 411 636 1.44E-41 T 12-10-2018 IPR035919 EAL domain superfamily M634_18115 6e800de1708cd2b0565b28bff1a268a9 637 Gene3D G3DSA:3.30.70.270 223 391 3.4E-21 T 12-10-2018 M634_18115 6e800de1708cd2b0565b28bff1a268a9 637 Pfam PF16448 LapD/MoxY periplasmic domain 23 146 2.7E-39 T 12-10-2018 IPR032244 LapD/MoxY, periplasmic domain M634_18115 6e800de1708cd2b0565b28bff1a268a9 637 SMART SM00267 226 392 3.1E-13 T 12-10-2018 IPR000160 GGDEF domain M634_18115 6e800de1708cd2b0565b28bff1a268a9 637 SUPERFAMILY SSF55073 243 390 7.45E-18 T 12-10-2018 IPR029787 Nucleotide cyclase M634_22725 565bb1556c33cc0a2c32f923fc3b3dcb 500 Pfam PF07730 Histidine kinase 304 367 6.0E-12 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 M634_22725 565bb1556c33cc0a2c32f923fc3b3dcb 500 SMART SM00387 407 500 0.0015 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_22725 565bb1556c33cc0a2c32f923fc3b3dcb 500 SUPERFAMILY SSF55874 372 498 8.54E-16 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_22725 565bb1556c33cc0a2c32f923fc3b3dcb 500 Gene3D G3DSA:3.30.565.10 371 499 2.5E-25 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_22725 565bb1556c33cc0a2c32f923fc3b3dcb 500 Pfam PF05231 MASE1 12 276 1.7E-15 T 12-10-2018 IPR007895 MASE1 M634_12675 93060d41961d1aa3344ccd3b25145c64 329 Pfam PF06463 Molybdenum Cofactor Synthesis C 186 312 5.1E-39 T 12-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 M634_12675 93060d41961d1aa3344ccd3b25145c64 329 Pfam PF04055 Radical SAM superfamily 19 181 2.5E-26 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 M634_12675 93060d41961d1aa3344ccd3b25145c64 329 SUPERFAMILY SSF102114 6 289 7.06E-70 T 12-10-2018 M634_12675 93060d41961d1aa3344ccd3b25145c64 329 Pfam PF13353 4Fe-4S single cluster domain 23 125 1.1E-8 T 12-10-2018 M634_12675 93060d41961d1aa3344ccd3b25145c64 329 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 6 329 9.0E-105 T 12-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 M634_12675 93060d41961d1aa3344ccd3b25145c64 329 SMART SM00729 14 214 1.3E-4 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 M634_12675 93060d41961d1aa3344ccd3b25145c64 329 Gene3D G3DSA:3.20.20.70 2 329 3.1E-82 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_12675 93060d41961d1aa3344ccd3b25145c64 329 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 5 329 36.908 T 12-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 M634_14615 cc9ef741ecf95a7de5297314ea1e5834 302 Pfam PF01136 Peptidase family U32 91 247 1.8E-13 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 M634_07060 b5682e0ccb6b98eb9fe2b1c7e989d31d 72 SUPERFAMILY SSF50249 1 67 5.78E-23 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_07060 b5682e0ccb6b98eb9fe2b1c7e989d31d 72 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 12-10-2018 IPR019844 Cold-shock conserved site M634_07060 b5682e0ccb6b98eb9fe2b1c7e989d31d 72 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 2.7E-28 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 M634_07060 b5682e0ccb6b98eb9fe2b1c7e989d31d 72 PRINTS PR00050 Cold shock protein signature 40 58 8.3E-15 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 M634_07060 b5682e0ccb6b98eb9fe2b1c7e989d31d 72 PRINTS PR00050 Cold shock protein signature 4 19 8.3E-15 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 M634_07060 b5682e0ccb6b98eb9fe2b1c7e989d31d 72 PRINTS PR00050 Cold shock protein signature 25 34 8.3E-15 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 M634_07060 b5682e0ccb6b98eb9fe2b1c7e989d31d 72 SMART SM00357 3 67 7.8E-25 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 M634_07060 b5682e0ccb6b98eb9fe2b1c7e989d31d 72 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 68 2.8E-41 T 12-10-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355 M634_07060 b5682e0ccb6b98eb9fe2b1c7e989d31d 72 PIRSF PIRSF002599 1 72 5.8E-23 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 M634_07060 b5682e0ccb6b98eb9fe2b1c7e989d31d 72 Gene3D G3DSA:2.40.50.140 1 65 8.4E-26 T 12-10-2018 M634_07790 6ebb11f52f109875aa58ce4c541957de 129 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 3 129 9.2E-48 T 12-10-2018 IPR014320 Phage shock protein, PspC M634_07790 6ebb11f52f109875aa58ce4c541957de 129 Pfam PF04024 PspC domain 4 62 9.8E-16 T 12-10-2018 IPR007168 Phage shock protein, PspC, N-terminal M634_16935 4d836ab2b912867ec7cc492eb2c50603 543 Gene3D G3DSA:3.40.50.300 292 543 2.6E-68 T 12-10-2018 M634_16935 4d836ab2b912867ec7cc492eb2c50603 543 SUPERFAMILY SSF52540 6 256 8.95E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_16935 4d836ab2b912867ec7cc492eb2c50603 543 SUPERFAMILY SSF52540 295 526 1.05E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_16935 4d836ab2b912867ec7cc492eb2c50603 543 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 264 1.2E-5 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 M634_16935 4d836ab2b912867ec7cc492eb2c50603 543 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 506 537 0.0053 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 M634_16935 4d836ab2b912867ec7cc492eb2c50603 543 Pfam PF00005 ABC transporter 304 455 2.5E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_16935 4d836ab2b912867ec7cc492eb2c50603 543 SMART SM00382 35 235 1.3E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_16935 4d836ab2b912867ec7cc492eb2c50603 543 SMART SM00382 312 504 1.7E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_16935 4d836ab2b912867ec7cc492eb2c50603 543 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_16935 4d836ab2b912867ec7cc492eb2c50603 543 ProSitePatterns PS00211 ABC transporters family signature. 427 441 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_16935 4d836ab2b912867ec7cc492eb2c50603 543 Pfam PF00005 ABC transporter 26 185 1.6E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_16935 4d836ab2b912867ec7cc492eb2c50603 543 Gene3D G3DSA:3.40.50.300 4 291 7.0E-81 T 12-10-2018 M634_18335 b751f323a49f86d76d4be21372a9d46b 123 Gene3D G3DSA:1.10.10.10 7 122 4.3E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_18335 b751f323a49f86d76d4be21372a9d46b 123 SMART SM00345 14 73 3.1E-12 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_18335 b751f323a49f86d76d4be21372a9d46b 123 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 73 4.7E-15 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_18335 b751f323a49f86d76d4be21372a9d46b 123 SUPERFAMILY SSF46785 1 82 3.37E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_14760 d329472de57f74eb0d37ce80bc5f6ad9 431 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M634_14760 d329472de57f74eb0d37ce80bc5f6ad9 431 SUPERFAMILY SSF53383 2 423 6.55E-135 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_14760 d329472de57f74eb0d37ce80bc5f6ad9 431 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 424 8.6E-195 T 12-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 M634_14760 d329472de57f74eb0d37ce80bc5f6ad9 431 Pfam PF00202 Aminotransferase class-III 33 396 9.1E-77 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M634_14760 d329472de57f74eb0d37ce80bc5f6ad9 431 Gene3D G3DSA:3.40.640.10 69 317 5.9E-179 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_14760 d329472de57f74eb0d37ce80bc5f6ad9 431 Gene3D G3DSA:3.90.1150.10 7 419 5.9E-179 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M634_14760 d329472de57f74eb0d37ce80bc5f6ad9 431 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 105.512 T 12-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 M634_20925 242fa409830046fb28204a8a98d02a29 389 Gene3D G3DSA:1.20.140.10 242 389 1.5E-47 T 12-10-2018 M634_20925 242fa409830046fb28204a8a98d02a29 389 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 343 362 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 M634_20925 242fa409830046fb28204a8a98d02a29 389 Gene3D G3DSA:1.10.540.10 2 127 2.1E-44 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 M634_20925 242fa409830046fb28204a8a98d02a29 389 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 14 125 8.0E-36 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 M634_20925 242fa409830046fb28204a8a98d02a29 389 SUPERFAMILY SSF56645 6 249 4.58E-84 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 M634_20925 242fa409830046fb28204a8a98d02a29 389 Gene3D G3DSA:2.40.110.10 128 241 5.7E-46 T 12-10-2018 M634_20925 242fa409830046fb28204a8a98d02a29 389 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 131 143 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 M634_20925 242fa409830046fb28204a8a98d02a29 389 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 224 2.8E-25 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 M634_20925 242fa409830046fb28204a8a98d02a29 389 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 384 2.6E-43 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 M634_20925 242fa409830046fb28204a8a98d02a29 389 PIRSF PIRSF016578 8 111 0.014 T 12-10-2018 M634_20925 242fa409830046fb28204a8a98d02a29 389 PIRSF PIRSF016578 142 389 1.1E-8 T 12-10-2018 M634_20925 242fa409830046fb28204a8a98d02a29 389 SUPERFAMILY SSF47203 234 387 3.54E-48 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 M634_12485 5882315ef4a9debd925eff32abe7b35d 341 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 340 137.986 T 12-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 M634_12485 5882315ef4a9debd925eff32abe7b35d 341 Gene3D G3DSA:3.40.718.10 2 340 3.8E-121 T 12-10-2018 M634_12485 5882315ef4a9debd925eff32abe7b35d 341 PIRSF PIRSF002465 2 339 1.5E-124 T 12-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 M634_12485 5882315ef4a9debd925eff32abe7b35d 341 Pfam PF02504 Fatty acid synthesis protein 5 327 1.2E-101 T 12-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 M634_12485 5882315ef4a9debd925eff32abe7b35d 341 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 335 7.9E-107 T 12-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 M634_12485 5882315ef4a9debd925eff32abe7b35d 341 SUPERFAMILY SSF53659 4 336 1.07E-102 T 12-10-2018 M634_11450 04d3969867a775ead97fce736b742959 597 Gene3D G3DSA:3.40.50.300 2 244 2.8E-44 T 12-10-2018 M634_11450 04d3969867a775ead97fce736b742959 597 Gene3D G3DSA:3.30.420.240 374 579 7.1E-33 T 12-10-2018 M634_16810 b53bd92cb257690fb4f70d63289ab230 448 SMART SM00490 264 345 2.7E-30 T 12-10-2018 IPR001650 Helicase, C-terminal M634_16810 b53bd92cb257690fb4f70d63289ab230 448 SUPERFAMILY SSF52540 77 366 7.29E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_16810 b53bd92cb257690fb4f70d63289ab230 448 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 156 164 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site M634_16810 b53bd92cb257690fb4f70d63289ab230 448 SMART SM00487 24 227 1.8E-53 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M634_16810 b53bd92cb257690fb4f70d63289ab230 448 Gene3D G3DSA:3.40.50.300 218 432 2.6E-51 T 12-10-2018 M634_16810 b53bd92cb257690fb4f70d63289ab230 448 Gene3D G3DSA:3.40.50.300 1 216 1.7E-74 T 12-10-2018 M634_16810 b53bd92cb257690fb4f70d63289ab230 448 Pfam PF00271 Helicase conserved C-terminal domain 239 345 1.0E-29 T 12-10-2018 IPR001650 Helicase, C-terminal M634_16810 b53bd92cb257690fb4f70d63289ab230 448 Pfam PF00270 DEAD/DEAH box helicase 29 200 3.0E-48 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 M634_21470 da4673b9a0ba79d9ff319ae57b2165a8 157 Pfam PF00583 Acetyltransferase (GNAT) family 30 138 4.5E-8 T 12-10-2018 IPR000182 GNAT domain M634_21470 da4673b9a0ba79d9ff319ae57b2165a8 157 SUPERFAMILY SSF55729 12 147 4.88E-20 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_21470 da4673b9a0ba79d9ff319ae57b2165a8 157 Gene3D G3DSA:3.40.630.30 1 156 3.6E-28 T 12-10-2018 M634_00755 70c3159df12c220e1b0f3e1ef3c9541e 404 Pfam PF00842 Alanine racemase, C-terminal domain 277 403 3.1E-31 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M634_00755 70c3159df12c220e1b0f3e1ef3c9541e 404 Pfam PF01168 Alanine racemase, N-terminal domain 45 268 3.3E-46 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M634_00755 70c3159df12c220e1b0f3e1ef3c9541e 404 Gene3D G3DSA:3.20.20.10 47 264 4.8E-127 T 12-10-2018 IPR029066 PLP-binding barrel M634_00755 70c3159df12c220e1b0f3e1ef3c9541e 404 Hamap MF_01201 Alanine racemase. 38 404 24.937 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M634_00755 70c3159df12c220e1b0f3e1ef3c9541e 404 SUPERFAMILY SSF50621 269 403 2.27E-39 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 M634_00755 70c3159df12c220e1b0f3e1ef3c9541e 404 TIGRFAM TIGR00492 alr: alanine racemase 41 390 1.3E-65 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M634_00755 70c3159df12c220e1b0f3e1ef3c9541e 404 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 69 79 - T 12-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M634_00755 70c3159df12c220e1b0f3e1ef3c9541e 404 PRINTS PR00992 Alanine racemase signature 162 174 6.0E-32 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M634_00755 70c3159df12c220e1b0f3e1ef3c9541e 404 PRINTS PR00992 Alanine racemase signature 330 347 6.0E-32 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M634_00755 70c3159df12c220e1b0f3e1ef3c9541e 404 PRINTS PR00992 Alanine racemase signature 309 324 6.0E-32 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M634_00755 70c3159df12c220e1b0f3e1ef3c9541e 404 PRINTS PR00992 Alanine racemase signature 64 80 6.0E-32 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M634_00755 70c3159df12c220e1b0f3e1ef3c9541e 404 PRINTS PR00992 Alanine racemase signature 100 118 6.0E-32 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M634_00755 70c3159df12c220e1b0f3e1ef3c9541e 404 PRINTS PR00992 Alanine racemase signature 241 268 6.0E-32 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M634_00755 70c3159df12c220e1b0f3e1ef3c9541e 404 PRINTS PR00992 Alanine racemase signature 198 209 6.0E-32 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M634_00755 70c3159df12c220e1b0f3e1ef3c9541e 404 SUPERFAMILY SSF51419 45 276 2.22E-44 T 12-10-2018 IPR029066 PLP-binding barrel M634_00755 70c3159df12c220e1b0f3e1ef3c9541e 404 Gene3D G3DSA:2.40.37.10 41 400 4.8E-127 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 M634_00755 70c3159df12c220e1b0f3e1ef3c9541e 404 SMART SM01005 276 404 1.5E-45 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M634_00630 2951e2c2c5d74930b2451c9ca9cb5304 181 Pfam PF00929 Exonuclease 9 170 2.6E-37 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III M634_00630 2951e2c2c5d74930b2451c9ca9cb5304 181 SUPERFAMILY SSF53098 3 180 1.47E-49 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M634_00630 2951e2c2c5d74930b2451c9ca9cb5304 181 SMART SM00479 7 180 3.9E-24 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III M634_00630 2951e2c2c5d74930b2451c9ca9cb5304 181 Gene3D G3DSA:3.30.420.10 1 181 2.2E-75 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M634_00630 2951e2c2c5d74930b2451c9ca9cb5304 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 44.198 T 12-10-2018 IPR022894 Oligoribonuclease GO:0000175 M634_14915 67f846bf3734d4c80489bb4cf3c4e59d 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 258 5.4E-108 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 M634_14915 67f846bf3734d4c80489bb4cf3c4e59d 264 Gene3D G3DSA:3.20.20.60 1 263 3.5E-106 T 12-10-2018 M634_14915 67f846bf3734d4c80489bb4cf3c4e59d 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 41.345 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 M634_14915 67f846bf3734d4c80489bb4cf3c4e59d 264 PIRSF PIRSF000388 1 264 1.3E-100 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 M634_14915 67f846bf3734d4c80489bb4cf3c4e59d 264 SUPERFAMILY SSF51621 3 262 1.26E-105 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 M634_14915 67f846bf3734d4c80489bb4cf3c4e59d 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 262 4.2E-114 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 M634_16915 613ff6b11654a53db7a21aafa352e9a3 244 SUPERFAMILY SSF141371 23 135 5.69E-33 T 12-10-2018 M634_16915 613ff6b11654a53db7a21aafa352e9a3 244 SUPERFAMILY SSF141371 136 243 1.7E-31 T 12-10-2018 M634_16915 613ff6b11654a53db7a21aafa352e9a3 244 Pfam PF07238 PilZ domain 132 233 1.0E-15 T 12-10-2018 IPR009875 PilZ domain GO:0035438 M634_16915 613ff6b11654a53db7a21aafa352e9a3 244 Gene3D G3DSA:2.30.110.10 21 134 6.2E-41 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 M634_16915 613ff6b11654a53db7a21aafa352e9a3 244 Gene3D G3DSA:2.40.10.220 135 244 1.6E-37 T 12-10-2018 M634_16915 613ff6b11654a53db7a21aafa352e9a3 244 Pfam PF12945 Flagellar protein YcgR 36 125 3.0E-14 T 12-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal M634_03745 c4661d9c40c4d043d9ca032bc327c822 626 SMART SM00267 454 619 8.1E-46 T 12-10-2018 IPR000160 GGDEF domain M634_03745 c4661d9c40c4d043d9ca032bc327c822 626 SUPERFAMILY SSF103190 207 298 9.42E-26 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily M634_03745 c4661d9c40c4d043d9ca032bc327c822 626 SUPERFAMILY SSF55073 470 618 5.1E-38 T 12-10-2018 IPR029787 Nucleotide cyclase M634_03745 c4661d9c40c4d043d9ca032bc327c822 626 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 344 461 1.3E-13 T 12-10-2018 IPR000014 PAS domain M634_03745 c4661d9c40c4d043d9ca032bc327c822 626 Gene3D G3DSA:3.30.450.20 73 206 7.4E-42 T 12-10-2018 M634_03745 c4661d9c40c4d043d9ca032bc327c822 626 Gene3D G3DSA:3.30.70.270 467 624 7.2E-42 T 12-10-2018 M634_03745 c4661d9c40c4d043d9ca032bc327c822 626 Pfam PF00990 Diguanylate cyclase, GGDEF domain 467 614 1.8E-34 T 12-10-2018 IPR000160 GGDEF domain M634_03745 c4661d9c40c4d043d9ca032bc327c822 626 Gene3D G3DSA:1.20.5.170 26 72 4.2E-27 T 12-10-2018 M634_03745 c4661d9c40c4d043d9ca032bc327c822 626 SUPERFAMILY SSF55785 352 462 3.59E-19 T 12-10-2018 IPR035965 PAS domain superfamily M634_03745 c4661d9c40c4d043d9ca032bc327c822 626 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 462 617 9.4E-38 T 12-10-2018 IPR000160 GGDEF domain M634_03745 c4661d9c40c4d043d9ca032bc327c822 626 Gene3D G3DSA:3.30.450.20 333 466 1.4E-21 T 12-10-2018 M634_03745 c4661d9c40c4d043d9ca032bc327c822 626 SUPERFAMILY SSF103190 36 206 1.1E-47 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily M634_03745 c4661d9c40c4d043d9ca032bc327c822 626 Pfam PF02743 Cache domain 38 289 2.7E-15 T 12-10-2018 IPR033479 Double Cache domain 1 M634_03745 c4661d9c40c4d043d9ca032bc327c822 626 Gene3D G3DSA:3.30.450.20 207 302 7.1E-40 T 12-10-2018 M634_03745 c4661d9c40c4d043d9ca032bc327c822 626 Pfam PF13426 PAS domain 352 453 4.0E-10 T 12-10-2018 IPR000014 PAS domain M634_15180 e8c6c10fd65c9ff5ee5b365039f5e814 160 Pfam PF02464 Competence-damaged protein 6 158 6.4E-56 T 12-10-2018 IPR008136 CinA, C-terminal M634_15180 e8c6c10fd65c9ff5ee5b365039f5e814 160 Gene3D G3DSA:3.90.950.20 1 160 4.9E-58 T 12-10-2018 IPR036653 CinA-like, C-terminal M634_15180 e8c6c10fd65c9ff5ee5b365039f5e814 160 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 14 158 6.0E-50 T 12-10-2018 IPR008136 CinA, C-terminal M634_15180 e8c6c10fd65c9ff5ee5b365039f5e814 160 SUPERFAMILY SSF142433 4 159 4.18E-56 T 12-10-2018 IPR036653 CinA-like, C-terminal M634_00170 172c44b6db02fe4c0a08641ec7d7996e 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 73 9.0E-24 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_00170 172c44b6db02fe4c0a08641ec7d7996e 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 73 6.2E-38 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_00170 172c44b6db02fe4c0a08641ec7d7996e 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 12-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_00170 172c44b6db02fe4c0a08641ec7d7996e 75 Pfam PF01084 Ribosomal protein S18 19 68 2.8E-25 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_00170 172c44b6db02fe4c0a08641ec7d7996e 75 Gene3D G3DSA:4.10.640.10 20 75 7.8E-29 T 12-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_00170 172c44b6db02fe4c0a08641ec7d7996e 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.42 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_00170 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.6E-18 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_00170 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.6E-18 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_00170 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.6E-18 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_00170 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.6E-18 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_00170 172c44b6db02fe4c0a08641ec7d7996e 75 SUPERFAMILY SSF46911 3 74 2.49E-29 T 12-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_18495 3b3d8dea494bc48ad2219c123323647f 363 Pfam PF00990 Diguanylate cyclase, GGDEF domain 216 361 1.6E-34 T 12-10-2018 IPR000160 GGDEF domain M634_18495 3b3d8dea494bc48ad2219c123323647f 363 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 213 360 1.4E-31 T 12-10-2018 IPR000160 GGDEF domain M634_18495 3b3d8dea494bc48ad2219c123323647f 363 Gene3D G3DSA:3.30.70.270 211 363 1.5E-39 T 12-10-2018 M634_18495 3b3d8dea494bc48ad2219c123323647f 363 SUPERFAMILY SSF55073 220 361 2.98E-35 T 12-10-2018 IPR029787 Nucleotide cyclase M634_18495 3b3d8dea494bc48ad2219c123323647f 363 SMART SM00267 203 363 9.1E-35 T 12-10-2018 IPR000160 GGDEF domain M634_05785 2882d9ea43614f36151e98c51b37727c 883 SMART SM01081 34 195 6.2E-93 T 12-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 M634_05785 2882d9ea43614f36151e98c51b37727c 883 Gene3D G3DSA:3.30.379.10 205 329 7.1E-24 T 12-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 M634_05785 2882d9ea43614f36151e98c51b37727c 883 SUPERFAMILY SSF51445 332 772 6.32E-143 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M634_05785 2882d9ea43614f36151e98c51b37727c 883 SUPERFAMILY SSF55545 208 331 4.49E-23 T 12-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 M634_05785 2882d9ea43614f36151e98c51b37727c 883 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 332 764 1.3E-108 T 12-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 M634_05785 2882d9ea43614f36151e98c51b37727c 883 Pfam PF03173 Putative carbohydrate binding domain 35 193 1.8E-62 T 12-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 M634_05785 2882d9ea43614f36151e98c51b37727c 883 SUPERFAMILY SSF81296 781 882 3.22E-37 T 12-10-2018 IPR014756 Immunoglobulin E-set M634_05785 2882d9ea43614f36151e98c51b37727c 883 Gene3D G3DSA:2.60.40.10 818 882 7.8E-24 T 12-10-2018 IPR013783 Immunoglobulin-like fold M634_05785 2882d9ea43614f36151e98c51b37727c 883 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 211 329 2.7E-13 T 12-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal M634_05785 2882d9ea43614f36151e98c51b37727c 883 Gene3D G3DSA:2.60.40.290 25 167 8.8E-56 T 12-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 M634_05785 2882d9ea43614f36151e98c51b37727c 883 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 804 879 7.4E-28 T 12-10-2018 IPR004867 Chitobiase C-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 M634_05785 2882d9ea43614f36151e98c51b37727c 883 Gene3D G3DSA:3.20.20.80 330 817 6.4E-165 T 12-10-2018 M634_05785 2882d9ea43614f36151e98c51b37727c 883 SUPERFAMILY SSF49384 26 198 1.82E-65 T 12-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 M634_05785 2882d9ea43614f36151e98c51b37727c 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 355 376 3.1E-48 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 M634_05785 2882d9ea43614f36151e98c51b37727c 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 728 744 3.1E-48 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 M634_05785 2882d9ea43614f36151e98c51b37727c 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 292 312 3.1E-48 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 M634_05785 2882d9ea43614f36151e98c51b37727c 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 746 763 3.1E-48 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 M634_05785 2882d9ea43614f36151e98c51b37727c 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 432 449 3.1E-48 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 M634_05785 2882d9ea43614f36151e98c51b37727c 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 326 343 3.1E-48 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 M634_05785 2882d9ea43614f36151e98c51b37727c 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 526 539 3.1E-48 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 M634_05785 2882d9ea43614f36151e98c51b37727c 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 499 517 3.1E-48 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 M634_04630 e6da70235a3409749058182b52d7e2bf 555 Gene3D G3DSA:3.40.50.300 1 285 1.7E-86 T 12-10-2018 M634_04630 e6da70235a3409749058182b52d7e2bf 555 Pfam PF00005 ABC transporter 340 473 1.2E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_04630 e6da70235a3409749058182b52d7e2bf 555 Pfam PF12848 ABC transporter 230 306 2.1E-13 T 12-10-2018 IPR032781 ABC-transporter extension domain M634_04630 e6da70235a3409749058182b52d7e2bf 555 Pfam PF00005 ABC transporter 22 191 2.0E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_04630 e6da70235a3409749058182b52d7e2bf 555 SUPERFAMILY SSF52540 9 242 3.1E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_04630 e6da70235a3409749058182b52d7e2bf 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_04630 e6da70235a3409749058182b52d7e2bf 555 SUPERFAMILY SSF52540 302 525 1.58E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_04630 e6da70235a3409749058182b52d7e2bf 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 3 553 9.0E-293 T 12-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 M634_04630 e6da70235a3409749058182b52d7e2bf 555 SMART SM00382 31 236 5.8E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_04630 e6da70235a3409749058182b52d7e2bf 555 SMART SM00382 348 518 1.2E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_04630 e6da70235a3409749058182b52d7e2bf 555 Gene3D G3DSA:3.40.50.300 286 555 2.7E-76 T 12-10-2018 M634_24645 645fd8fe890469839b089a04d402bd90 301 SUPERFAMILY SSF103481 41 140 9.81E-10 T 12-10-2018 M634_24645 645fd8fe890469839b089a04d402bd90 301 Pfam PF00892 EamA-like transporter family 7 139 7.7E-19 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M634_24645 645fd8fe890469839b089a04d402bd90 301 Pfam PF00892 EamA-like transporter family 155 285 3.5E-12 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M634_04505 78e3109b1ae466998038aa6b4fcde383 283 SUPERFAMILY SSF55831 2 283 1.44E-92 T 12-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 M634_04505 78e3109b1ae466998038aa6b4fcde383 283 Pfam PF00303 Thymidylate synthase 2 283 2.0E-75 T 12-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 M634_04505 78e3109b1ae466998038aa6b4fcde383 283 Gene3D G3DSA:3.30.572.10 1 283 9.9E-82 T 12-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 M634_04505 78e3109b1ae466998038aa6b4fcde383 283 ProSitePatterns PS00091 Thymidylate synthase active site. 140 168 - T 12-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 M634_04505 78e3109b1ae466998038aa6b4fcde383 283 PRINTS PR00108 Thymidylate synthase family signature 211 228 1.5E-14 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 M634_04505 78e3109b1ae466998038aa6b4fcde383 283 PRINTS PR00108 Thymidylate synthase family signature 44 65 1.5E-14 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 M634_04505 78e3109b1ae466998038aa6b4fcde383 283 PRINTS PR00108 Thymidylate synthase family signature 173 199 1.5E-14 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 M634_04505 78e3109b1ae466998038aa6b4fcde383 283 PRINTS PR00108 Thymidylate synthase family signature 129 148 1.5E-14 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 M634_04505 78e3109b1ae466998038aa6b4fcde383 283 Hamap MF_00008 Thymidylate synthase [thyA]. 1 283 33.633 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 M634_04505 78e3109b1ae466998038aa6b4fcde383 283 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 283 6.9E-44 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 M634_01010 37a32f4988c3294fd83953d9dff91f0b 530 PIRSF PIRSF000414 1 530 5.5E-229 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 M634_01010 37a32f4988c3294fd83953d9dff91f0b 530 SMART SM00851 19 132 2.9E-61 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain M634_01010 37a32f4988c3294fd83953d9dff91f0b 530 SUPERFAMILY SSF52335 7 197 4.84E-72 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily M634_01010 37a32f4988c3294fd83953d9dff91f0b 530 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 461 3.2E-120 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 M634_01010 37a32f4988c3294fd83953d9dff91f0b 530 Gene3D G3DSA:3.40.140.20 219 375 2.8E-58 T 12-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 M634_01010 37a32f4988c3294fd83953d9dff91f0b 530 SMART SM00798 137 462 1.5E-219 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 M634_01010 37a32f4988c3294fd83953d9dff91f0b 530 Pfam PF02142 MGS-like domain 19 132 9.4E-31 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain M634_01010 37a32f4988c3294fd83953d9dff91f0b 530 Gene3D G3DSA:3.40.50.1380 1 200 1.4E-87 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily M634_01010 37a32f4988c3294fd83953d9dff91f0b 530 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 530 2.1E-260 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 M634_01010 37a32f4988c3294fd83953d9dff91f0b 530 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 530 45.977 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 M634_01010 37a32f4988c3294fd83953d9dff91f0b 530 Gene3D G3DSA:3.40.140.20 394 530 2.6E-60 T 12-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 M634_01010 37a32f4988c3294fd83953d9dff91f0b 530 SUPERFAMILY SSF53927 222 530 4.51E-131 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 M634_15865 0cfdce98ddd0a67687fddf863fdbdce0 323 SUPERFAMILY SSF54631 262 320 5.65E-8 T 12-10-2018 M634_15865 0cfdce98ddd0a67687fddf863fdbdce0 323 Gene3D G3DSA:3.10.580.10 196 320 8.1E-44 T 12-10-2018 M634_15865 0cfdce98ddd0a67687fddf863fdbdce0 323 PIRSF PIRSF004692 2 323 7.4E-132 T 12-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 M634_15865 0cfdce98ddd0a67687fddf863fdbdce0 323 Pfam PF01380 SIS domain 41 172 1.3E-32 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 M634_15865 0cfdce98ddd0a67687fddf863fdbdce0 323 Pfam PF00571 CBS domain 268 320 1.1E-6 T 12-10-2018 IPR000644 CBS domain M634_15865 0cfdce98ddd0a67687fddf863fdbdce0 323 Pfam PF00571 CBS domain 211 258 1.3E-4 T 12-10-2018 IPR000644 CBS domain M634_15865 0cfdce98ddd0a67687fddf863fdbdce0 323 Gene3D G3DSA:3.40.50.10490 6 195 3.9E-65 T 12-10-2018 M634_15865 0cfdce98ddd0a67687fddf863fdbdce0 323 SMART SM00116 275 322 4.4 T 12-10-2018 IPR000644 CBS domain M634_15865 0cfdce98ddd0a67687fddf863fdbdce0 323 SMART SM00116 210 258 0.72 T 12-10-2018 IPR000644 CBS domain M634_15865 0cfdce98ddd0a67687fddf863fdbdce0 323 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 45 313 2.5E-112 T 12-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 M634_15865 0cfdce98ddd0a67687fddf863fdbdce0 323 SUPERFAMILY SSF53697 11 282 6.45E-69 T 12-10-2018 M634_20680 39b2c9a914e2bff5f8ddcc784de81d6a 763 SMART SM00052 502 747 1.3E-105 T 12-10-2018 IPR001633 EAL domain M634_20680 39b2c9a914e2bff5f8ddcc784de81d6a 763 Pfam PF02743 Cache domain 35 249 3.5E-14 T 12-10-2018 IPR033479 Double Cache domain 1 M634_20680 39b2c9a914e2bff5f8ddcc784de81d6a 763 SUPERFAMILY SSF141868 507 754 1.01E-83 T 12-10-2018 IPR035919 EAL domain superfamily M634_20680 39b2c9a914e2bff5f8ddcc784de81d6a 763 SMART SM00267 325 492 1.5E-48 T 12-10-2018 IPR000160 GGDEF domain M634_20680 39b2c9a914e2bff5f8ddcc784de81d6a 763 Pfam PF00990 Diguanylate cyclase, GGDEF domain 336 486 3.2E-41 T 12-10-2018 IPR000160 GGDEF domain M634_20680 39b2c9a914e2bff5f8ddcc784de81d6a 763 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 334 487 9.3E-33 T 12-10-2018 IPR000160 GGDEF domain M634_20680 39b2c9a914e2bff5f8ddcc784de81d6a 763 SUPERFAMILY SSF55073 341 492 7.85E-42 T 12-10-2018 IPR029787 Nucleotide cyclase M634_20680 39b2c9a914e2bff5f8ddcc784de81d6a 763 Gene3D G3DSA:3.20.20.450 505 760 1.4E-89 T 12-10-2018 IPR035919 EAL domain superfamily M634_20680 39b2c9a914e2bff5f8ddcc784de81d6a 763 Gene3D G3DSA:3.30.450.20 26 181 3.6E-8 T 12-10-2018 M634_20680 39b2c9a914e2bff5f8ddcc784de81d6a 763 Pfam PF00563 EAL domain 508 742 3.3E-71 T 12-10-2018 IPR001633 EAL domain M634_20680 39b2c9a914e2bff5f8ddcc784de81d6a 763 Gene3D G3DSA:3.30.70.270 330 504 1.7E-51 T 12-10-2018 M634_22980 7d1ccbd71fac500581c18168b876c9ab 334 SUPERFAMILY SSF53383 1 332 7.45E-117 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_22980 7d1ccbd71fac500581c18168b876c9ab 334 PIRSF PIRSF017617 1 334 1.2E-134 T 12-10-2018 IPR023603 Threonine aldolase M634_22980 7d1ccbd71fac500581c18168b876c9ab 334 Gene3D G3DSA:3.90.1150.10 244 334 3.1E-24 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M634_22980 7d1ccbd71fac500581c18168b876c9ab 334 Gene3D G3DSA:3.40.640.10 1 242 1.8E-96 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_22980 7d1ccbd71fac500581c18168b876c9ab 334 Pfam PF01212 Beta-eliminating lyase 2 283 7.0E-100 T 12-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 M634_08755 3b090dfb8f4974ef4ed76ac87d374e7f 157 Gene3D G3DSA:3.40.50.2300 1 135 3.7E-20 T 12-10-2018 M634_08755 3b090dfb8f4974ef4ed76ac87d374e7f 157 Pfam PF00072 Response regulator receiver domain 7 125 5.2E-15 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_08755 3b090dfb8f4974ef4ed76ac87d374e7f 157 SUPERFAMILY SSF52172 2 132 1.31E-20 T 12-10-2018 IPR011006 CheY-like superfamily M634_08755 3b090dfb8f4974ef4ed76ac87d374e7f 157 SMART SM00448 4 125 1.1E-11 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_11970 b76e1b2d6756d39331de36103ae8050a 188 Pfam PF09285 Elongation factor P, C-terminal 132 187 6.0E-19 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 M634_11970 b76e1b2d6756d39331de36103ae8050a 188 PIRSF PIRSF005901 1 188 1.7E-59 T 12-10-2018 IPR020599 Translation elongation factor P/YeiP M634_11970 b76e1b2d6756d39331de36103ae8050a 188 SUPERFAMILY SSF50104 1 65 5.78E-12 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily M634_11970 b76e1b2d6756d39331de36103ae8050a 188 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 188 4.6E-90 T 12-10-2018 IPR011897 Translation elongation factor P-like, YeiP M634_11970 b76e1b2d6756d39331de36103ae8050a 188 SUPERFAMILY SSF50249 132 188 2.06E-14 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_11970 b76e1b2d6756d39331de36103ae8050a 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 62 1.3E-17 T 12-10-2018 IPR013185 Translation elongation factor, KOW-like M634_11970 b76e1b2d6756d39331de36103ae8050a 188 SMART SM00841 132 187 2.7E-25 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 M634_11970 b76e1b2d6756d39331de36103ae8050a 188 ProSitePatterns PS01275 Elongation factor P signature. 153 172 - T 12-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site M634_11970 b76e1b2d6756d39331de36103ae8050a 188 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 188 42.306 T 12-10-2018 IPR011897 Translation elongation factor P-like, YeiP M634_11970 b76e1b2d6756d39331de36103ae8050a 188 Gene3D G3DSA:2.40.50.140 131 188 1.7E-19 T 12-10-2018 M634_11970 b76e1b2d6756d39331de36103ae8050a 188 SUPERFAMILY SSF50249 67 129 1.84E-11 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_11970 b76e1b2d6756d39331de36103ae8050a 188 SMART SM01185 69 124 4.8E-13 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 M634_11970 b76e1b2d6756d39331de36103ae8050a 188 Gene3D G3DSA:2.30.30.30 1 65 4.3E-15 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 M634_11970 b76e1b2d6756d39331de36103ae8050a 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 5.8E-13 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 M634_11970 b76e1b2d6756d39331de36103ae8050a 188 Gene3D G3DSA:2.40.50.140 67 130 9.9E-15 T 12-10-2018 M634_13745 eb37237db43929ac9795e4e46fde7b11 233 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 25 178 2.4E-37 T 12-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 M634_13745 eb37237db43929ac9795e4e46fde7b11 233 Gene3D G3DSA:3.30.1380.10 3 197 3.0E-34 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 M634_13745 eb37237db43929ac9795e4e46fde7b11 233 SUPERFAMILY SSF55166 19 175 1.18E-19 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 M634_17515 a244cbeeacdd61441a09f411af9fa4a8 374 SUPERFAMILY SSF55031 177 282 6.41E-25 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain M634_17515 a244cbeeacdd61441a09f411af9fa4a8 374 Pfam PF07687 Peptidase dimerisation domain 175 274 8.6E-23 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain M634_17515 a244cbeeacdd61441a09f411af9fa4a8 374 SUPERFAMILY SSF53187 2 373 2.73E-42 T 12-10-2018 M634_17515 a244cbeeacdd61441a09f411af9fa4a8 374 Gene3D G3DSA:3.30.70.360 177 286 2.9E-104 T 12-10-2018 M634_17515 a244cbeeacdd61441a09f411af9fa4a8 374 PIRSF PIRSF037238 1 373 1.6E-148 T 12-10-2018 IPR017150 Peptidase M20, glutamate carboxypeptidase M634_17515 a244cbeeacdd61441a09f411af9fa4a8 374 Gene3D G3DSA:3.40.630.10 11 361 2.9E-104 T 12-10-2018 M634_17515 a244cbeeacdd61441a09f411af9fa4a8 374 Pfam PF01546 Peptidase family M20/M25/M40 73 370 1.0E-24 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 M634_15415 386471d494c7dd86b74663bba0bb7ced 386 Gene3D G3DSA:3.40.50.1260 10 379 5.7E-151 T 12-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_15415 386471d494c7dd86b74663bba0bb7ced 386 Gene3D G3DSA:3.40.50.1260 165 373 5.7E-151 T 12-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_15415 386471d494c7dd86b74663bba0bb7ced 386 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 38.313 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_15415 386471d494c7dd86b74663bba0bb7ced 386 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 12-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_15415 386471d494c7dd86b74663bba0bb7ced 386 Pfam PF00162 Phosphoglycerate kinase 6 373 2.4E-138 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_15415 386471d494c7dd86b74663bba0bb7ced 386 SUPERFAMILY SSF53748 3 382 4.48E-144 T 12-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_15415 386471d494c7dd86b74663bba0bb7ced 386 PIRSF PIRSF000724 1 386 5.4E-134 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_15415 386471d494c7dd86b74663bba0bb7ced 386 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 2.9E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_15415 386471d494c7dd86b74663bba0bb7ced 386 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 2.9E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_15415 386471d494c7dd86b74663bba0bb7ced 386 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 2.9E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_15415 386471d494c7dd86b74663bba0bb7ced 386 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 2.9E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_15415 386471d494c7dd86b74663bba0bb7ced 386 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 2.9E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_15415 386471d494c7dd86b74663bba0bb7ced 386 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 2.9E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_15415 386471d494c7dd86b74663bba0bb7ced 386 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 2.9E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_15415 386471d494c7dd86b74663bba0bb7ced 386 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 2.9E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_15415 386471d494c7dd86b74663bba0bb7ced 386 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 2.9E-82 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_19435 557abeda6855b3e5f205b180178c559a 498 SUPERFAMILY SSF103473 9 478 5.49E-19 T 12-10-2018 IPR036259 MFS transporter superfamily M634_19435 557abeda6855b3e5f205b180178c559a 498 Pfam PF07690 Major Facilitator Superfamily 10 423 2.1E-11 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M634_19435 557abeda6855b3e5f205b180178c559a 498 Gene3D G3DSA:1.20.1250.20 7 475 8.8E-62 T 12-10-2018 M634_20335 d480f36b13a9a481f52288d3ef02e153 252 Gene3D G3DSA:1.10.260.40 3 70 7.2E-6 T 12-10-2018 M634_20335 d480f36b13a9a481f52288d3ef02e153 252 SMART SM00530 10 65 3.5E-4 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 M634_20335 d480f36b13a9a481f52288d3ef02e153 252 SUPERFAMILY SSF47413 5 68 6.76E-8 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M634_20335 d480f36b13a9a481f52288d3ef02e153 252 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 11 68 1.1E-7 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 M634_08105 a6426cf7c2a07a9cd3879e0979c075b7 306 SUPERFAMILY SSF109604 24 295 9.1E-39 T 12-10-2018 M634_08105 a6426cf7c2a07a9cd3879e0979c075b7 306 Gene3D G3DSA:1.10.3210.10 19 296 9.1E-38 T 12-10-2018 M634_08105 a6426cf7c2a07a9cd3879e0979c075b7 306 Pfam PF08668 HDOD domain 39 233 5.5E-36 T 12-10-2018 IPR013976 Metal-dependent hydrolase HDOD M634_19215 df950fdeb2af54ee6c5b2c8730e6115e 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 196 216 4.0E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_19215 df950fdeb2af54ee6c5b2c8730e6115e 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 4.0E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_19215 df950fdeb2af54ee6c5b2c8730e6115e 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 66 77 4.0E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_19215 df950fdeb2af54ee6c5b2c8730e6115e 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 4.0E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_19215 df950fdeb2af54ee6c5b2c8730e6115e 235 Pfam PF00106 short chain dehydrogenase 3 192 1.5E-18 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_19215 df950fdeb2af54ee6c5b2c8730e6115e 235 Gene3D G3DSA:3.40.50.720 1 235 1.5E-43 T 12-10-2018 M634_19215 df950fdeb2af54ee6c5b2c8730e6115e 235 SUPERFAMILY SSF51735 2 235 3.3E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_24370 921fead002bd2b9f4a809e20545cface 99 Pfam PF04175 Protein of unknown function (DUF406) 7 95 7.8E-29 T 12-10-2018 IPR005272 Conserved hypothetical protein CHP00743 M634_24370 921fead002bd2b9f4a809e20545cface 99 Gene3D G3DSA:3.30.70.860 2 99 3.5E-40 T 12-10-2018 IPR035571 UPF0234-like, C-terminal M634_11265 e3582df50ed64a1b18a04cca2e870bca 454 PRINTS PR00095 Anthranilate synthase component I signature 386 400 9.4E-18 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 M634_11265 e3582df50ed64a1b18a04cca2e870bca 454 PRINTS PR00095 Anthranilate synthase component I signature 306 319 9.4E-18 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 M634_11265 e3582df50ed64a1b18a04cca2e870bca 454 PRINTS PR00095 Anthranilate synthase component I signature 401 415 9.4E-18 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 M634_11265 e3582df50ed64a1b18a04cca2e870bca 454 PRINTS PR00095 Anthranilate synthase component I signature 292 305 9.4E-18 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 M634_11265 e3582df50ed64a1b18a04cca2e870bca 454 Pfam PF00425 chorismate binding enzyme 191 444 1.3E-98 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal M634_11265 e3582df50ed64a1b18a04cca2e870bca 454 SUPERFAMILY SSF56322 11 453 7.06E-144 T 12-10-2018 IPR005801 ADC synthase GO:0009058 M634_11265 e3582df50ed64a1b18a04cca2e870bca 454 Gene3D G3DSA:3.60.120.10 4 454 3.7E-173 T 12-10-2018 IPR005801 ADC synthase GO:0009058 M634_11265 e3582df50ed64a1b18a04cca2e870bca 454 Pfam PF04715 Anthranilate synthase component I, N terminal region 19 156 3.0E-29 T 12-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 M634_11265 e3582df50ed64a1b18a04cca2e870bca 454 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 109 445 6.5E-122 T 12-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 M634_07275 0017575ffeb47e40799b1356558a04e9 232 TIGRFAM TIGR02796 tolQ: protein TolQ 6 220 1.8E-92 T 12-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 M634_07275 0017575ffeb47e40799b1356558a04e9 232 Pfam PF01618 MotA/TolQ/ExbB proton channel family 80 207 8.7E-43 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel M634_07275 0017575ffeb47e40799b1356558a04e9 232 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 5 225 43.757 T 12-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 M634_06605 a77b7ebb47ca2e0217f201d6cb42daae 783 SMART SM00382 347 491 1.4E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_06605 a77b7ebb47ca2e0217f201d6cb42daae 783 Gene3D G3DSA:3.30.230.10 584 771 1.4E-85 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M634_06605 a77b7ebb47ca2e0217f201d6cb42daae 783 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 351 488 3.1E-17 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 M634_06605 a77b7ebb47ca2e0217f201d6cb42daae 783 Hamap MF_01973 Lon protease [lon]. 11 771 72.006 T 12-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 M634_06605 a77b7ebb47ca2e0217f201d6cb42daae 783 SUPERFAMILY SSF52540 312 586 1.83E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_06605 a77b7ebb47ca2e0217f201d6cb42daae 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 355 374 2.3E-56 T 12-10-2018 M634_06605 a77b7ebb47ca2e0217f201d6cb42daae 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 672 691 2.3E-56 T 12-10-2018 M634_06605 a77b7ebb47ca2e0217f201d6cb42daae 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 702 721 2.3E-56 T 12-10-2018 M634_06605 a77b7ebb47ca2e0217f201d6cb42daae 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 594 610 2.3E-56 T 12-10-2018 M634_06605 a77b7ebb47ca2e0217f201d6cb42daae 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 725 743 2.3E-56 T 12-10-2018 M634_06605 a77b7ebb47ca2e0217f201d6cb42daae 783 SUPERFAMILY SSF54211 594 769 2.01E-59 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M634_06605 a77b7ebb47ca2e0217f201d6cb42daae 783 PIRSF PIRSF001174 1 774 0.0 T 12-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 M634_06605 a77b7ebb47ca2e0217f201d6cb42daae 783 TIGRFAM TIGR00763 lon: endopeptidase La 12 770 0.0 T 12-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 M634_06605 a77b7ebb47ca2e0217f201d6cb42daae 783 Gene3D G3DSA:3.40.50.300 312 489 6.9E-61 T 12-10-2018 M634_06605 a77b7ebb47ca2e0217f201d6cb42daae 783 Gene3D G3DSA:1.20.58.1480 119 244 6.2E-44 T 12-10-2018 M634_06605 a77b7ebb47ca2e0217f201d6cb42daae 783 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 196 7.1E-41 T 12-10-2018 IPR003111 Lon, substrate-binding domain M634_06605 a77b7ebb47ca2e0217f201d6cb42daae 783 Gene3D G3DSA:2.30.130.40 1 116 1.6E-35 T 12-10-2018 M634_06605 a77b7ebb47ca2e0217f201d6cb42daae 783 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 569 771 4.5E-100 T 12-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 M634_06605 a77b7ebb47ca2e0217f201d6cb42daae 783 Gene3D G3DSA:1.10.8.60 490 583 2.6E-33 T 12-10-2018 M634_06605 a77b7ebb47ca2e0217f201d6cb42daae 783 SUPERFAMILY SSF88697 10 200 1.74E-48 T 12-10-2018 IPR015947 PUA-like superfamily M634_06605 a77b7ebb47ca2e0217f201d6cb42daae 783 SMART SM00464 10 201 1.4E-76 T 12-10-2018 IPR003111 Lon, substrate-binding domain M634_13005 575ced79694a1045c928bb19a71026bf 99 Gene3D G3DSA:1.10.3990.20 8 99 1.5E-32 T 12-10-2018 IPR038268 Ribbon-helix-helix domain superfamily M634_13005 575ced79694a1045c928bb19a71026bf 99 Pfam PF13467 Ribbon-helix-helix domain 16 82 1.5E-24 T 12-10-2018 IPR027373 Ribbon-helix-helix domain M634_04840 12fe0e25b22cb37c8b493023b4369d19 377 Gene3D G3DSA:3.20.20.105 1 370 2.1E-174 T 12-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 M634_04840 12fe0e25b22cb37c8b493023b4369d19 377 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 5 370 1.1E-186 T 12-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 M634_04840 12fe0e25b22cb37c8b493023b4369d19 377 SUPERFAMILY SSF51713 3 366 3.66E-164 T 12-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 M634_04840 12fe0e25b22cb37c8b493023b4369d19 377 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 3 366 57.27 T 12-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 M634_04840 12fe0e25b22cb37c8b493023b4369d19 377 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 5 370 4.2E-178 T 12-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 M634_04840 12fe0e25b22cb37c8b493023b4369d19 377 Pfam PF01702 Queuine tRNA-ribosyltransferase 128 363 3.2E-97 T 12-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 M634_24045 1435e5d17f96c7d07e7d9d98ee2e70ce 351 PIRSF PIRSF005508 1 351 9.2E-135 T 12-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 M634_24045 1435e5d17f96c7d07e7d9d98ee2e70ce 351 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 13 342 5.4E-137 T 12-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 M634_24045 1435e5d17f96c7d07e7d9d98ee2e70ce 351 Gene3D G3DSA:1.20.1530.20 3 342 5.6E-23 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily M634_24045 1435e5d17f96c7d07e7d9d98ee2e70ce 351 Pfam PF01758 Sodium Bile acid symporter family 58 254 5.4E-61 T 12-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 M634_03040 df68e27cbe4c9855a68ed7e1ab285332 367 Gene3D G3DSA:3.40.50.2000 192 351 1.0E-26 T 12-10-2018 M634_03040 df68e27cbe4c9855a68ed7e1ab285332 367 Pfam PF13439 Glycosyltransferase Family 4 16 180 5.3E-8 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 M634_03040 df68e27cbe4c9855a68ed7e1ab285332 367 Pfam PF00534 Glycosyl transferases group 1 197 340 4.9E-20 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 M634_03040 df68e27cbe4c9855a68ed7e1ab285332 367 Gene3D G3DSA:3.40.50.2000 2 191 3.1E-12 T 12-10-2018 M634_03040 df68e27cbe4c9855a68ed7e1ab285332 367 SUPERFAMILY SSF53756 1 365 1.26E-44 T 12-10-2018 M634_20255 ffe9e9e5e4eb91f2b0013aa8a6c20bf8 311 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 119 1.2E-14 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 M634_20255 ffe9e9e5e4eb91f2b0013aa8a6c20bf8 311 SUPERFAMILY SSF55347 121 264 1.99E-48 T 12-10-2018 M634_20255 ffe9e9e5e4eb91f2b0013aa8a6c20bf8 311 Gene3D G3DSA:3.40.50.720 1 118 4.6E-27 T 12-10-2018 M634_20255 ffe9e9e5e4eb91f2b0013aa8a6c20bf8 311 Gene3D G3DSA:3.30.360.10 119 311 5.2E-57 T 12-10-2018 M634_20255 ffe9e9e5e4eb91f2b0013aa8a6c20bf8 311 SUPERFAMILY SSF51735 1 165 3.11E-39 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_04430 1817b91590fce55bb3c5e15c926c874a 305 Gene3D G3DSA:1.10.443.10 118 299 1.6E-73 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 M634_04430 1817b91590fce55bb3c5e15c926c874a 305 Pfam PF00589 Phage integrase family 120 291 6.9E-53 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 M634_04430 1817b91590fce55bb3c5e15c926c874a 305 Gene3D G3DSA:1.10.150.130 10 105 1.3E-21 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal M634_04430 1817b91590fce55bb3c5e15c926c874a 305 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 16 305 5.9E-115 T 12-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 M634_04430 1817b91590fce55bb3c5e15c926c874a 305 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 11 305 60.811 T 12-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 M634_04430 1817b91590fce55bb3c5e15c926c874a 305 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 13 305 55.941 T 12-10-2018 IPR023009 Tyrosine recombinase XerC/XerD M634_04430 1817b91590fce55bb3c5e15c926c874a 305 SUPERFAMILY SSF56349 113 303 3.83E-57 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 M634_04430 1817b91590fce55bb3c5e15c926c874a 305 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 15 97 3.0E-19 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 M634_04430 1817b91590fce55bb3c5e15c926c874a 305 SUPERFAMILY SSF47823 11 107 2.16E-33 T 12-10-2018 M634_06635 5ee25799888769ad7ae197a4d6b19d98 440 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 5 435 34.797 T 12-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 M634_06635 5ee25799888769ad7ae197a4d6b19d98 440 SMART SM00471 58 264 4.6E-8 T 12-10-2018 IPR003607 HD/PDEase domain M634_06635 5ee25799888769ad7ae197a4d6b19d98 440 SUPERFAMILY SSF109604 19 437 7.53E-79 T 12-10-2018 M634_06635 5ee25799888769ad7ae197a4d6b19d98 440 Pfam PF13286 Phosphohydrolase-associated domain 343 433 3.2E-25 T 12-10-2018 IPR026875 Phosphohydrolase-associated domain M634_06635 5ee25799888769ad7ae197a4d6b19d98 440 Pfam PF01966 HD domain 62 145 1.6E-7 T 12-10-2018 IPR006674 HD domain M634_06635 5ee25799888769ad7ae197a4d6b19d98 440 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 24 436 1.4E-128 T 12-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 M634_18370 5d222603c9492e5e18164dcfe6288294 231 PIRSF PIRSF006232 1 229 1.8E-55 T 12-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 M634_18370 5d222603c9492e5e18164dcfe6288294 231 SUPERFAMILY SSF51182 1 230 7.54E-71 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily M634_18370 5d222603c9492e5e18164dcfe6288294 231 Gene3D G3DSA:2.60.120.10 11 135 4.8E-84 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M634_18370 5d222603c9492e5e18164dcfe6288294 231 Gene3D G3DSA:2.60.120.10 7 231 4.8E-84 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M634_18370 5d222603c9492e5e18164dcfe6288294 231 Pfam PF02678 Pirin 12 119 1.8E-33 T 12-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 M634_22820 48f5ba4d60e656a0be77d64d2f2bf218 146 Pfam PF13778 Domain of unknown function (DUF4174) 25 136 1.7E-26 T 12-10-2018 IPR025232 Domain of unknown function DUF4174 M634_09125 15d081370147bbb86f3d3c159b5f0553 440 SMART SM00382 161 342 8.5E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_09125 15d081370147bbb86f3d3c159b5f0553 440 SUPERFAMILY SSF52540 95 364 1.21E-96 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_09125 15d081370147bbb86f3d3c159b5f0553 440 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 27 92 2.1E-9 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M634_09125 15d081370147bbb86f3d3c159b5f0553 440 Gene3D G3DSA:3.40.50.12240 16 439 7.8E-152 T 12-10-2018 M634_09125 15d081370147bbb86f3d3c159b5f0553 440 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 358 3.0E-78 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M634_09125 15d081370147bbb86f3d3c159b5f0553 440 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 349 358 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M634_09125 15d081370147bbb86f3d3c159b5f0553 440 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 13 437 3.0E-175 T 12-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M634_09125 15d081370147bbb86f3d3c159b5f0553 440 TIGRFAM TIGR02546 III_secr_ATP: type III secretion apparatus H+-transporting two-sector ATPase 21 437 2.7E-200 T 12-10-2018 IPR013380 ATPase, type III secretion system, H+-transporting GO:0005524|GO:0005737|GO:0006754|GO:0030254|GO:0030257|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M634_12070 1cd2480c7b1e6da41a2398fb2bc39459 131 SUPERFAMILY SSF54637 9 129 4.73E-38 T 12-10-2018 IPR029069 HotDog domain superfamily M634_12070 1cd2480c7b1e6da41a2398fb2bc39459 131 Gene3D G3DSA:3.10.129.10 1 131 1.7E-39 T 12-10-2018 M634_12070 1cd2480c7b1e6da41a2398fb2bc39459 131 Pfam PF03061 Thioesterase superfamily 26 98 6.9E-20 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 M634_17930 ee0fca5c26ecc9c9926c2eaa466af210 437 Gene3D G3DSA:3.40.50.720 1 170 1.2E-64 T 12-10-2018 M634_17930 ee0fca5c26ecc9c9926c2eaa466af210 437 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 142 172 - T 12-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 M634_17930 ee0fca5c26ecc9c9926c2eaa466af210 437 SUPERFAMILY SSF51735 3 170 1.4E-52 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_17930 ee0fca5c26ecc9c9926c2eaa466af210 437 Pfam PF02056 Family 4 glycosyl hydrolase 6 187 7.2E-59 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 M634_17930 ee0fca5c26ecc9c9926c2eaa466af210 437 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 412 2.2E-51 T 12-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 M634_17930 ee0fca5c26ecc9c9926c2eaa466af210 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 99 112 1.7E-41 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 M634_17930 ee0fca5c26ecc9c9926c2eaa466af210 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 1.7E-41 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 M634_17930 ee0fca5c26ecc9c9926c2eaa466af210 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 142 159 1.7E-41 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 M634_17930 ee0fca5c26ecc9c9926c2eaa466af210 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 1.7E-41 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 M634_17930 ee0fca5c26ecc9c9926c2eaa466af210 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 113 133 1.7E-41 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 M634_17930 ee0fca5c26ecc9c9926c2eaa466af210 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 1.7E-41 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 M634_17930 ee0fca5c26ecc9c9926c2eaa466af210 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 78 94 1.7E-41 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 M634_17930 ee0fca5c26ecc9c9926c2eaa466af210 437 SUPERFAMILY SSF56327 173 436 1.69E-85 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 M634_17930 ee0fca5c26ecc9c9926c2eaa466af210 437 Gene3D G3DSA:3.90.110.10 171 437 6.7E-94 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 M634_12320 1fa7e32ca4c3c27da02c35c669491ada 612 Gene3D G3DSA:3.40.190.10 16 321 5.2E-44 T 12-10-2018 M634_12320 1fa7e32ca4c3c27da02c35c669491ada 612 Gene3D G3DSA:3.10.105.10 322 548 4.6E-40 T 12-10-2018 M634_12320 1fa7e32ca4c3c27da02c35c669491ada 612 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 93 490 1.0E-60 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain M634_12320 1fa7e32ca4c3c27da02c35c669491ada 612 PIRSF PIRSF002741 1 573 2.6E-66 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 M634_12320 1fa7e32ca4c3c27da02c35c669491ada 612 SUPERFAMILY SSF53850 45 566 9.05E-93 T 12-10-2018 M634_24170 7566e9323d29d58dd714c021ad4cd751 1046 Gene3D G3DSA:1.20.1640.10 9 511 0.0 T 12-10-2018 M634_24170 7566e9323d29d58dd714c021ad4cd751 1046 Gene3D G3DSA:3.30.70.1320 134 334 0.0 T 12-10-2018 M634_24170 7566e9323d29d58dd714c021ad4cd751 1046 SUPERFAMILY SSF82714 184 274 3.79E-24 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_24170 7566e9323d29d58dd714c021ad4cd751 1046 SUPERFAMILY SSF82866 830 1026 1.44E-45 T 12-10-2018 M634_24170 7566e9323d29d58dd714c021ad4cd751 1046 SUPERFAMILY SSF82693 39 132 4.19E-23 T 12-10-2018 M634_24170 7566e9323d29d58dd714c021ad4cd751 1046 Gene3D G3DSA:3.30.70.1440 668 865 0.0 T 12-10-2018 M634_24170 7566e9323d29d58dd714c021ad4cd751 1046 SUPERFAMILY SSF82714 721 805 2.88E-21 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_24170 7566e9323d29d58dd714c021ad4cd751 1046 Gene3D G3DSA:3.30.2090.10 720 808 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_24170 7566e9323d29d58dd714c021ad4cd751 1046 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 2.4E-88 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_24170 7566e9323d29d58dd714c021ad4cd751 1046 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 2.4E-88 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_24170 7566e9323d29d58dd714c021ad4cd751 1046 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 2.4E-88 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_24170 7566e9323d29d58dd714c021ad4cd751 1046 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 2.4E-88 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_24170 7566e9323d29d58dd714c021ad4cd751 1046 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 2.4E-88 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_24170 7566e9323d29d58dd714c021ad4cd751 1046 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 2.4E-88 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_24170 7566e9323d29d58dd714c021ad4cd751 1046 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 2.4E-88 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_24170 7566e9323d29d58dd714c021ad4cd751 1046 PRINTS PR00702 Acriflavin resistance protein family signature 620 634 2.4E-88 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_24170 7566e9323d29d58dd714c021ad4cd751 1046 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 2.4E-88 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_24170 7566e9323d29d58dd714c021ad4cd751 1046 SUPERFAMILY SSF82693 671 856 1.74E-24 T 12-10-2018 M634_24170 7566e9323d29d58dd714c021ad4cd751 1046 Gene3D G3DSA:3.30.2090.10 180 277 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_24170 7566e9323d29d58dd714c021ad4cd751 1046 SUPERFAMILY SSF82866 299 499 2.62E-53 T 12-10-2018 M634_24170 7566e9323d29d58dd714c021ad4cd751 1046 Pfam PF00873 AcrB/AcrD/AcrF family 3 1026 0.0 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_24170 7566e9323d29d58dd714c021ad4cd751 1046 SUPERFAMILY SSF82693 564 670 3.92E-24 T 12-10-2018 M634_24170 7566e9323d29d58dd714c021ad4cd751 1046 SUPERFAMILY SSF82693 137 332 1.44E-22 T 12-10-2018 M634_24170 7566e9323d29d58dd714c021ad4cd751 1046 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1041 0.0 T 12-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 M634_24170 7566e9323d29d58dd714c021ad4cd751 1046 Gene3D G3DSA:3.30.70.1430 39 816 0.0 T 12-10-2018 M634_24170 7566e9323d29d58dd714c021ad4cd751 1046 Gene3D G3DSA:1.20.1640.10 512 1023 0.0 T 12-10-2018 M634_24170 7566e9323d29d58dd714c021ad4cd751 1046 Gene3D G3DSA:3.30.70.1430 566 667 0.0 T 12-10-2018 M634_07340 b3a366f6d684ab2c7458edae6ad0dbd2 149 Pfam PF06610 L-alanine exporter 8 142 1.3E-69 T 12-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 M634_07340 b3a366f6d684ab2c7458edae6ad0dbd2 149 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 15 142 1.0E-69 T 12-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 M634_07340 b3a366f6d684ab2c7458edae6ad0dbd2 149 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 2 145 31.974 T 12-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 M634_06375 c7095f7048b2761682a48491c6291eaf 220 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 4 219 28.089 T 12-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 M634_06375 c7095f7048b2761682a48491c6291eaf 220 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 5 218 5.2E-78 T 12-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 M634_06375 c7095f7048b2761682a48491c6291eaf 220 SUPERFAMILY SSF63848 113 216 9.68E-30 T 12-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 M634_06375 c7095f7048b2761682a48491c6291eaf 220 Gene3D G3DSA:2.160.20.70 113 219 8.3E-31 T 12-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 M634_06375 c7095f7048b2761682a48491c6291eaf 220 Gene3D G3DSA:3.30.750.120 2 112 2.1E-33 T 12-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily M634_06375 c7095f7048b2761682a48491c6291eaf 220 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 115 215 3.5E-32 T 12-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 M634_06375 c7095f7048b2761682a48491c6291eaf 220 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 102 4.5E-30 T 12-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 M634_21300 0d5cab12ecd4001c7a85c1d7d08dd50a 356 Gene3D G3DSA:3.40.50.410 105 306 5.7E-52 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily M634_21300 0d5cab12ecd4001c7a85c1d7d08dd50a 356 Pfam PF00092 von Willebrand factor type A domain 107 297 2.6E-25 T 12-10-2018 IPR002035 von Willebrand factor, type A M634_21300 0d5cab12ecd4001c7a85c1d7d08dd50a 356 SUPERFAMILY SSF53300 103 302 1.08E-35 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily M634_21300 0d5cab12ecd4001c7a85c1d7d08dd50a 356 SMART SM00327 105 306 2.6E-24 T 12-10-2018 IPR002035 von Willebrand factor, type A M634_04745 4aff31f6e115c1c073f4df61675c0d29 304 Pfam PF04381 Putative exonuclease, RdgC 1 298 2.9E-125 T 12-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 M634_04745 4aff31f6e115c1c073f4df61675c0d29 304 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 301 38.967 T 12-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 M634_06480 2d6560164f9c0f488f3a4a2315ccd8fa 85 Hamap MF_01217 Acyl carrier protein [acpP]. 8 82 13.802 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 M634_06480 2d6560164f9c0f488f3a4a2315ccd8fa 85 Gene3D G3DSA:1.10.1200.10 3 85 6.5E-19 T 12-10-2018 IPR036736 ACP-like superfamily M634_06480 2d6560164f9c0f488f3a4a2315ccd8fa 85 Pfam PF00550 Phosphopantetheine attachment site 11 78 2.8E-12 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain M634_06480 2d6560164f9c0f488f3a4a2315ccd8fa 85 SUPERFAMILY SSF47336 4 83 9.03E-20 T 12-10-2018 IPR036736 ACP-like superfamily M634_23410 beaec15ae04343ec8b0754de7ba1a3f7 293 Pfam PF06481 COX Aromatic Rich Motif 239 283 4.2E-13 T 12-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 M634_23410 beaec15ae04343ec8b0754de7ba1a3f7 293 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 16 239 1.1E-113 T 12-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 M634_23410 beaec15ae04343ec8b0754de7ba1a3f7 293 SUPERFAMILY SSF81464 29 116 4.58E-24 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23410 beaec15ae04343ec8b0754de7ba1a3f7 293 PIRSF PIRSF000292 1 292 5.4E-127 T 12-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 M634_23410 beaec15ae04343ec8b0754de7ba1a3f7 293 Gene3D G3DSA:2.60.40.420 113 281 2.8E-54 T 12-10-2018 IPR008972 Cupredoxin M634_23410 beaec15ae04343ec8b0754de7ba1a3f7 293 SUPERFAMILY SSF49503 122 280 2.68E-49 T 12-10-2018 IPR008972 Cupredoxin M634_23410 beaec15ae04343ec8b0754de7ba1a3f7 293 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 148 221 1.1E-7 T 12-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23410 beaec15ae04343ec8b0754de7ba1a3f7 293 Gene3D G3DSA:1.10.287.90 27 112 2.0E-34 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_20850 6e689d74b04a157b2fa99bd8c10ecad3 437 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 35 54 1.1E-4 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal M634_20850 6e689d74b04a157b2fa99bd8c10ecad3 437 SUPERFAMILY SSF56524 78 317 2.49E-67 T 12-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 M634_20850 6e689d74b04a157b2fa99bd8c10ecad3 437 SUPERFAMILY SSF81296 322 435 7.0E-32 T 12-10-2018 IPR014756 Immunoglobulin E-set M634_20850 6e689d74b04a157b2fa99bd8c10ecad3 437 Pfam PF00174 Oxidoreductase molybdopterin binding domain 124 290 1.8E-49 T 12-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 M634_20850 6e689d74b04a157b2fa99bd8c10ecad3 437 PRINTS PR00407 Eukaryotic molybdopterin domain signature 416 429 2.5E-25 T 12-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 M634_20850 6e689d74b04a157b2fa99bd8c10ecad3 437 PRINTS PR00407 Eukaryotic molybdopterin domain signature 239 255 2.5E-25 T 12-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 M634_20850 6e689d74b04a157b2fa99bd8c10ecad3 437 PRINTS PR00407 Eukaryotic molybdopterin domain signature 86 100 2.5E-25 T 12-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 M634_20850 6e689d74b04a157b2fa99bd8c10ecad3 437 PRINTS PR00407 Eukaryotic molybdopterin domain signature 320 332 2.5E-25 T 12-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 M634_20850 6e689d74b04a157b2fa99bd8c10ecad3 437 PRINTS PR00407 Eukaryotic molybdopterin domain signature 184 199 2.5E-25 T 12-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 M634_20850 6e689d74b04a157b2fa99bd8c10ecad3 437 PRINTS PR00407 Eukaryotic molybdopterin domain signature 256 269 2.5E-25 T 12-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 M634_20850 6e689d74b04a157b2fa99bd8c10ecad3 437 PRINTS PR00407 Eukaryotic molybdopterin domain signature 358 370 2.5E-25 T 12-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 M634_20850 6e689d74b04a157b2fa99bd8c10ecad3 437 PRINTS PR00407 Eukaryotic molybdopterin domain signature 106 122 2.5E-25 T 12-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 M634_20850 6e689d74b04a157b2fa99bd8c10ecad3 437 PRINTS PR00407 Eukaryotic molybdopterin domain signature 272 285 2.5E-25 T 12-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 M634_20850 6e689d74b04a157b2fa99bd8c10ecad3 437 Gene3D G3DSA:3.90.420.10 71 319 4.9E-73 T 12-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 M634_20850 6e689d74b04a157b2fa99bd8c10ecad3 437 Pfam PF03404 Mo-co oxidoreductase dimerisation domain 319 434 2.9E-20 T 12-10-2018 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 Reactome: R-HSA-1614517 M634_20850 6e689d74b04a157b2fa99bd8c10ecad3 437 Gene3D G3DSA:2.60.40.650 322 436 3.3E-33 T 12-10-2018 M634_16420 507f1a01404fbb5345a63c9b79c02bd8 68 SMART SM00530 11 66 5.2E-14 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 M634_16420 507f1a01404fbb5345a63c9b79c02bd8 68 Pfam PF01381 Helix-turn-helix 13 65 8.7E-16 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 M634_16420 507f1a01404fbb5345a63c9b79c02bd8 68 SUPERFAMILY SSF47413 2 67 2.95E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M634_16420 507f1a01404fbb5345a63c9b79c02bd8 68 Gene3D G3DSA:1.10.260.40 1 68 2.1E-20 T 12-10-2018 M634_00140 8382a69b55e00d778e6c5f2e6f9dc522 139 Gene3D G3DSA:2.60.120.460 2 139 1.7E-43 T 12-10-2018 IPR035917 YjbQ-like superfamily M634_00140 8382a69b55e00d778e6c5f2e6f9dc522 139 SUPERFAMILY SSF111038 1 139 2.22E-50 T 12-10-2018 IPR035917 YjbQ-like superfamily M634_00140 8382a69b55e00d778e6c5f2e6f9dc522 139 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 100 118 - T 12-10-2018 IPR001602 Uncharacterised protein family UPF0047 M634_00140 8382a69b55e00d778e6c5f2e6f9dc522 139 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 5 139 7.4E-46 T 12-10-2018 IPR001602 Uncharacterised protein family UPF0047 M634_00140 8382a69b55e00d778e6c5f2e6f9dc522 139 PIRSF PIRSF004681 1 139 4.3E-47 T 12-10-2018 IPR001602 Uncharacterised protein family UPF0047 M634_00140 8382a69b55e00d778e6c5f2e6f9dc522 139 Pfam PF01894 Uncharacterised protein family UPF0047 19 135 9.3E-40 T 12-10-2018 IPR001602 Uncharacterised protein family UPF0047 M634_17850 163ac2f9dbca64b1bd36a70b8d05fdd8 279 Gene3D G3DSA:1.10.10.2730 235 277 2.3E-14 T 12-10-2018 M634_17850 163ac2f9dbca64b1bd36a70b8d05fdd8 279 SUPERFAMILY SSF46689 229 277 4.44E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_17850 163ac2f9dbca64b1bd36a70b8d05fdd8 279 SMART SM00342 192 275 1.0E-29 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_17850 163ac2f9dbca64b1bd36a70b8d05fdd8 279 SUPERFAMILY SSF51215 6 162 5.62E-28 T 12-10-2018 IPR037923 Transcription regulator HTH-like M634_17850 163ac2f9dbca64b1bd36a70b8d05fdd8 279 Pfam PF12833 Helix-turn-helix domain 199 276 3.1E-17 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_17850 163ac2f9dbca64b1bd36a70b8d05fdd8 279 Pfam PF02311 AraC-like ligand binding domain 38 136 7.9E-17 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 M634_17850 163ac2f9dbca64b1bd36a70b8d05fdd8 279 Gene3D G3DSA:1.10.10.60 175 234 2.0E-11 T 12-10-2018 M634_17850 163ac2f9dbca64b1bd36a70b8d05fdd8 279 Gene3D G3DSA:2.60.120.280 5 167 2.0E-56 T 12-10-2018 M634_17850 163ac2f9dbca64b1bd36a70b8d05fdd8 279 SUPERFAMILY SSF46689 175 225 1.79E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_01730 8dd2022c7fbbf861daf16c0e3f1e297a 485 PIRSF PIRSF006247 1 485 2.5E-176 T 12-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 M634_01730 8dd2022c7fbbf861daf16c0e3f1e297a 485 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 468 9.6E-118 T 12-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 M634_01730 8dd2022c7fbbf861daf16c0e3f1e297a 485 Pfam PF02386 Cation transport protein 39 477 4.9E-90 T 12-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 M634_16075 5ec678e99ffe6e29c18a128612c12b44 669 SMART SM00267 216 386 5.3E-10 T 12-10-2018 IPR000160 GGDEF domain M634_16075 5ec678e99ffe6e29c18a128612c12b44 669 SUPERFAMILY SSF141868 406 638 2.75E-36 T 12-10-2018 IPR035919 EAL domain superfamily M634_16075 5ec678e99ffe6e29c18a128612c12b44 669 Gene3D G3DSA:3.20.20.450 397 641 4.9E-38 T 12-10-2018 IPR035919 EAL domain superfamily M634_16075 5ec678e99ffe6e29c18a128612c12b44 669 SUPERFAMILY SSF55073 233 386 5.57E-19 T 12-10-2018 IPR029787 Nucleotide cyclase M634_16075 5ec678e99ffe6e29c18a128612c12b44 669 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 226 382 4.4E-10 T 12-10-2018 IPR000160 GGDEF domain M634_16075 5ec678e99ffe6e29c18a128612c12b44 669 SMART SM00052 397 651 2.5E-14 T 12-10-2018 IPR001633 EAL domain M634_16075 5ec678e99ffe6e29c18a128612c12b44 669 Pfam PF00990 Diguanylate cyclase, GGDEF domain 229 381 5.0E-20 T 12-10-2018 IPR000160 GGDEF domain M634_16075 5ec678e99ffe6e29c18a128612c12b44 669 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 39 134 3.5E-28 T 12-10-2018 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 M634_16075 5ec678e99ffe6e29c18a128612c12b44 669 Pfam PF00563 EAL domain 406 637 2.2E-51 T 12-10-2018 IPR001633 EAL domain M634_16075 5ec678e99ffe6e29c18a128612c12b44 669 Gene3D G3DSA:3.30.70.270 211 387 5.0E-23 T 12-10-2018 M634_00280 a0efb5e28be4d41f4becb4b31db216c5 378 SUPERFAMILY SSF53187 3 377 1.51E-56 T 12-10-2018 M634_00280 a0efb5e28be4d41f4becb4b31db216c5 378 Hamap MF_01108 Acetylornithine deacetylase [argE]. 1 378 66.097 T 12-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 M634_00280 a0efb5e28be4d41f4becb4b31db216c5 378 Pfam PF01546 Peptidase family M20/M25/M40 72 373 4.5E-32 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 M634_00280 a0efb5e28be4d41f4becb4b31db216c5 378 Gene3D G3DSA:3.30.70.360 177 292 1.4E-79 T 12-10-2018 M634_00280 a0efb5e28be4d41f4becb4b31db216c5 378 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 8 372 1.9E-127 T 12-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 M634_00280 a0efb5e28be4d41f4becb4b31db216c5 378 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 106 143 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 M634_00280 a0efb5e28be4d41f4becb4b31db216c5 378 Gene3D G3DSA:3.40.630.10 28 360 1.4E-79 T 12-10-2018 M634_00280 a0efb5e28be4d41f4becb4b31db216c5 378 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 71 80 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 M634_00280 a0efb5e28be4d41f4becb4b31db216c5 378 SUPERFAMILY SSF55031 177 290 1.21E-22 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain M634_00280 a0efb5e28be4d41f4becb4b31db216c5 378 Pfam PF07687 Peptidase dimerisation domain 174 285 9.6E-26 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain M634_15855 7d59f26153b5a2694bdcecc571de25f5 267 Pfam PF00005 ABC transporter 23 170 3.0E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_15855 7d59f26153b5a2694bdcecc571de25f5 267 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_15855 7d59f26153b5a2694bdcecc571de25f5 267 SUPERFAMILY SSF52540 6 239 4.96E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_15855 7d59f26153b5a2694bdcecc571de25f5 267 Gene3D G3DSA:3.40.50.300 4 253 2.1E-67 T 12-10-2018 M634_15855 7d59f26153b5a2694bdcecc571de25f5 267 SMART SM00382 31 228 4.9E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_12565 bde58e885714140452c8161ab710bbf0 178 Pfam PF02600 Disulfide bond formation protein DsbB 14 162 2.5E-43 T 12-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 M634_12565 bde58e885714140452c8161ab710bbf0 178 SUPERFAMILY SSF158442 17 163 2.88E-44 T 12-10-2018 IPR023380 DsbB-like superfamily M634_12565 bde58e885714140452c8161ab710bbf0 178 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 9 170 21.991 T 12-10-2018 IPR022920 Disulphide bond formation protein DsbB M634_12565 bde58e885714140452c8161ab710bbf0 178 Gene3D G3DSA:1.20.1550.10 3 177 5.4E-60 T 12-10-2018 IPR023380 DsbB-like superfamily M634_01245 1137766df1979b42848978379b07064d 472 TIGRFAM TIGR00797 matE: MATE efflux family protein 49 443 1.7E-74 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M634_01245 1137766df1979b42848978379b07064d 472 Pfam PF01554 MatE 49 209 3.2E-24 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M634_01245 1137766df1979b42848978379b07064d 472 Pfam PF01554 MatE 275 430 1.9E-11 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M634_04135 e3885cf8f858dd87a8ff34071d9b0f9a 196 Gene3D G3DSA:3.40.50.10490 1 195 1.4E-72 T 12-10-2018 M634_04135 e3885cf8f858dd87a8ff34071d9b0f9a 196 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 34.37 T 12-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 M634_04135 e3885cf8f858dd87a8ff34071d9b0f9a 196 Pfam PF13580 SIS domain 9 144 1.7E-34 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 M634_04135 e3885cf8f858dd87a8ff34071d9b0f9a 196 SUPERFAMILY SSF53697 1 191 1.05E-56 T 12-10-2018 M634_17105 624ae4c420e155cf33998dfa18473cbf 345 SUPERFAMILY SSF50494 8 280 2.88E-58 T 12-10-2018 IPR009003 Peptidase S1, PA clan M634_17105 624ae4c420e155cf33998dfa18473cbf 345 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 78 83 - T 12-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 M634_17105 624ae4c420e155cf33998dfa18473cbf 345 SMART SM00020 35 276 2.0E-50 T 12-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 M634_17105 624ae4c420e155cf33998dfa18473cbf 345 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 225 236 - T 12-10-2018 IPR033116 Serine proteases, trypsin family, serine active site M634_17105 624ae4c420e155cf33998dfa18473cbf 345 Gene3D G3DSA:2.40.10.10 48 277 1.6E-53 T 12-10-2018 M634_17105 624ae4c420e155cf33998dfa18473cbf 345 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 132 146 2.0E-12 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 M634_17105 624ae4c420e155cf33998dfa18473cbf 345 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 68 83 2.0E-12 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 M634_17105 624ae4c420e155cf33998dfa18473cbf 345 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 224 236 2.0E-12 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 M634_17105 624ae4c420e155cf33998dfa18473cbf 345 Gene3D G3DSA:2.40.10.10 26 270 1.6E-53 T 12-10-2018 M634_17105 624ae4c420e155cf33998dfa18473cbf 345 Pfam PF00089 Trypsin 36 276 9.1E-42 T 12-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 M634_13550 9504d2f6034e7bea578c4ae9b3fe78cc 246 PIRSF PIRSF002884 13 246 4.7E-89 T 12-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 M634_13550 9504d2f6034e7bea578c4ae9b3fe78cc 246 SUPERFAMILY SSF75708 26 245 7.32E-65 T 12-10-2018 M634_13550 9504d2f6034e7bea578c4ae9b3fe78cc 246 Pfam PF04344 Chemotaxis phosphatase, CheZ 37 246 2.6E-76 T 12-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 M634_13550 9504d2f6034e7bea578c4ae9b3fe78cc 246 Gene3D G3DSA:1.10.287.500 55 189 8.4E-46 T 12-10-2018 M634_13405 65b4552f9803496953c72df7b7d88398 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 3.4E-144 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 M634_13405 65b4552f9803496953c72df7b7d88398 361 Gene3D G3DSA:3.60.150.10 1 361 3.6E-161 T 12-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 M634_13405 65b4552f9803496953c72df7b7d88398 361 PIRSF PIRSF001456 3 360 1.0E-143 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 M634_13405 65b4552f9803496953c72df7b7d88398 361 SUPERFAMILY SSF103263 4 354 2.49E-150 T 12-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 M634_13405 65b4552f9803496953c72df7b7d88398 361 Pfam PF01264 Chorismate synthase 10 345 1.5E-144 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 M634_13405 65b4552f9803496953c72df7b7d88398 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 12-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 M634_13405 65b4552f9803496953c72df7b7d88398 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 12-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 M634_13405 65b4552f9803496953c72df7b7d88398 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 12-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 M634_13405 65b4552f9803496953c72df7b7d88398 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.752 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 M634_08935 fca7020229a685e8594d1924b6659b54 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 515 1.3E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_08935 fca7020229a685e8594d1924b6659b54 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 480 1.3E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_08935 fca7020229a685e8594d1924b6659b54 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 534 1.3E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_08935 fca7020229a685e8594d1924b6659b54 539 Gene3D G3DSA:3.30.450.20 199 310 2.4E-22 T 12-10-2018 M634_08935 fca7020229a685e8594d1924b6659b54 539 Gene3D G3DSA:3.30.450.20 33 164 6.8E-41 T 12-10-2018 M634_08935 fca7020229a685e8594d1924b6659b54 539 SMART SM00091 213 279 5.6E-5 T 12-10-2018 IPR000014 PAS domain M634_08935 fca7020229a685e8594d1924b6659b54 539 SUPERFAMILY SSF55785 215 306 2.97E-11 T 12-10-2018 IPR035965 PAS domain superfamily M634_08935 fca7020229a685e8594d1924b6659b54 539 SUPERFAMILY SSF55890 322 390 1.14E-9 T 12-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 M634_08935 fca7020229a685e8594d1924b6659b54 539 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 320 372 3.0E-9 T 12-10-2018 IPR039506 SpoOB, alpha-helical domain M634_08935 fca7020229a685e8594d1924b6659b54 539 Pfam PF17203 Single cache domain 3 39 168 3.7E-19 T 12-10-2018 IPR033463 Single cache domain 3 M634_08935 fca7020229a685e8594d1924b6659b54 539 SUPERFAMILY SSF103190 40 169 9.81E-35 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily M634_08935 fca7020229a685e8594d1924b6659b54 539 SMART SM00387 418 537 5.0E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_08935 fca7020229a685e8594d1924b6659b54 539 SUPERFAMILY SSF55874 389 534 8.12E-23 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_08935 fca7020229a685e8594d1924b6659b54 539 Gene3D G3DSA:3.30.565.10 382 539 3.4E-23 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_08935 fca7020229a685e8594d1924b6659b54 539 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 420 536 1.8E-15 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_08935 fca7020229a685e8594d1924b6659b54 539 Pfam PF00989 PAS fold 214 277 5.5E-7 T 12-10-2018 IPR013767 PAS fold GO:0006355 M634_12870 f019e63641f18cc8d7a6908155b92716 285 PRINTS PR00169 Potassium channel signature 212 238 1.3E-35 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 M634_12870 f019e63641f18cc8d7a6908155b92716 285 PRINTS PR00169 Potassium channel signature 63 86 1.3E-35 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 M634_12870 f019e63641f18cc8d7a6908155b92716 285 PRINTS PR00169 Potassium channel signature 154 177 1.3E-35 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 M634_12870 f019e63641f18cc8d7a6908155b92716 285 PRINTS PR00169 Potassium channel signature 89 109 1.3E-35 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 M634_12870 f019e63641f18cc8d7a6908155b92716 285 PRINTS PR00169 Potassium channel signature 183 205 1.3E-35 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 M634_12870 f019e63641f18cc8d7a6908155b92716 285 PRINTS PR00169 Potassium channel signature 21 49 1.3E-35 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 M634_12870 f019e63641f18cc8d7a6908155b92716 285 PRINTS PR00169 Potassium channel signature 125 151 1.3E-35 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 M634_12870 f019e63641f18cc8d7a6908155b92716 285 SUPERFAMILY SSF81324 28 239 3.06E-51 T 12-10-2018 M634_12870 f019e63641f18cc8d7a6908155b92716 285 Pfam PF00520 Ion transport protein 29 239 8.9E-31 T 12-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 M634_12870 f019e63641f18cc8d7a6908155b92716 285 Gene3D G3DSA:1.10.287.70 28 241 3.1E-57 T 12-10-2018 M634_06915 c8da8b139ec335607e7c4fb15e5635e8 752 Pfam PF00753 Metallo-beta-lactamase superfamily 504 670 4.2E-9 T 12-10-2018 IPR001279 Metallo-beta-lactamase M634_06915 c8da8b139ec335607e7c4fb15e5635e8 752 SMART SM00849 506 689 2.4E-8 T 12-10-2018 IPR001279 Metallo-beta-lactamase M634_06915 c8da8b139ec335607e7c4fb15e5635e8 752 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 137 718 5.3E-117 T 12-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 M634_06915 c8da8b139ec335607e7c4fb15e5635e8 752 Gene3D G3DSA:3.60.15.10 494 732 5.2E-45 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M634_06915 c8da8b139ec335607e7c4fb15e5635e8 752 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 230 406 8.2E-28 T 12-10-2018 IPR004477 ComEC/Rec2-related protein M634_06915 c8da8b139ec335607e7c4fb15e5635e8 752 SUPERFAMILY SSF56281 494 741 2.98E-41 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M634_06915 c8da8b139ec335607e7c4fb15e5635e8 752 Pfam PF03772 Competence protein 208 466 4.0E-52 T 12-10-2018 IPR004477 ComEC/Rec2-related protein M634_03130 c40587e628aa764b81610ef519b96501 538 ProSitePatterns PS00211 ABC transporters family signature. 463 477 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_03130 c40587e628aa764b81610ef519b96501 538 Gene3D G3DSA:3.40.50.300 304 538 2.7E-58 T 12-10-2018 M634_03130 c40587e628aa764b81610ef519b96501 538 Pfam PF00005 ABC transporter 344 491 1.1E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_03130 c40587e628aa764b81610ef519b96501 538 SMART SM00382 353 537 3.4E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_03130 c40587e628aa764b81610ef519b96501 538 SUPERFAMILY SSF90123 15 294 4.97E-20 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M634_03130 c40587e628aa764b81610ef519b96501 538 Pfam PF00664 ABC transporter transmembrane region 21 258 8.8E-10 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 M634_03130 c40587e628aa764b81610ef519b96501 538 Gene3D G3DSA:1.20.1560.10 13 303 8.3E-13 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M634_03130 c40587e628aa764b81610ef519b96501 538 SUPERFAMILY SSF52540 336 534 1.7E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_15785 7862681694d4e7bc3e04b2d14e6bc424 266 SUPERFAMILY SSF49785 2 149 2.04E-17 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily M634_15785 7862681694d4e7bc3e04b2d14e6bc424 266 Gene3D G3DSA:2.60.120.260 26 156 5.0E-8 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily M634_08770 b7673abebd0b3b81d1fdfeb81903b1bb 219 PIRSF PIRSF006324 11 218 2.7E-60 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 M634_08770 b7673abebd0b3b81d1fdfeb81903b1bb 219 Pfam PF01810 LysE type translocator 26 214 6.9E-35 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 M634_04055 f282468a28f9888c09460e8822b6ff7c 268 Pfam PF00149 Calcineurin-like phosphoesterase 9 200 3.0E-16 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 M634_04055 f282468a28f9888c09460e8822b6ff7c 268 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 8 254 42.014 T 12-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 M634_04055 f282468a28f9888c09460e8822b6ff7c 268 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 199 254 4.0E-27 T 12-10-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 M634_04055 f282468a28f9888c09460e8822b6ff7c 268 Gene3D G3DSA:3.60.21.10 1 265 2.1E-70 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like M634_04055 f282468a28f9888c09460e8822b6ff7c 268 SUPERFAMILY SSF56300 6 253 3.65E-58 T 12-10-2018 M634_20030 f4de5b06b18322aafb9f0280bf377280 173 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 5 173 1.3E-60 T 12-10-2018 IPR018636 Protein of unknown function DUF2058 M634_09310 271c3c871d48d2ded528c392f029c194 423 Pfam PF02321 Outer membrane efflux protein 220 403 2.6E-25 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 M634_09310 271c3c871d48d2ded528c392f029c194 423 Pfam PF02321 Outer membrane efflux protein 10 198 5.3E-26 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 M634_09310 271c3c871d48d2ded528c392f029c194 423 Gene3D G3DSA:1.20.1600.10 8 418 4.8E-78 T 12-10-2018 M634_09310 271c3c871d48d2ded528c392f029c194 423 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 8 415 9.6E-116 T 12-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 M634_09310 271c3c871d48d2ded528c392f029c194 423 SUPERFAMILY SSF56954 9 417 1.22E-85 T 12-10-2018 M634_17390 a397f98429c20963d3ff2868cfc6415c 885 Pfam PF09985 C-terminal binding-module, SLH-like, of glucodextranase 690 871 7.3E-16 T 12-10-2018 IPR019248 Glucodextranase-like, C-terminal M634_17390 a397f98429c20963d3ff2868cfc6415c 885 Gene3D G3DSA:3.20.20.80 36 469 1.1E-106 T 12-10-2018 M634_17390 a397f98429c20963d3ff2868cfc6415c 885 Gene3D G3DSA:2.60.40.1190 674 880 1.7E-15 T 12-10-2018 M634_17390 a397f98429c20963d3ff2868cfc6415c 885 SUPERFAMILY SSF51445 40 473 5.47E-84 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M634_17390 a397f98429c20963d3ff2868cfc6415c 885 Pfam PF00128 Alpha amylase, catalytic domain 84 432 2.1E-62 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 M634_17390 a397f98429c20963d3ff2868cfc6415c 885 Gene3D G3DSA:2.60.40.1180 471 564 9.9E-8 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta M634_17390 a397f98429c20963d3ff2868cfc6415c 885 SMART SM00642 52 467 3.7E-70 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 M634_17390 a397f98429c20963d3ff2868cfc6415c 885 SUPERFAMILY SSF49344 688 869 1.06E-19 T 12-10-2018 M634_17390 a397f98429c20963d3ff2868cfc6415c 885 SUPERFAMILY SSF51011 488 564 1.84E-7 T 12-10-2018 M634_10240 699f8ac722682e950733f96afd361e52 490 SUPERFAMILY SSF55486 1 490 4.15E-119 T 12-10-2018 M634_10240 699f8ac722682e950733f96afd361e52 490 Gene3D G3DSA:1.10.1370.30 1 490 2.7E-196 T 12-10-2018 M634_10240 699f8ac722682e950733f96afd361e52 490 PIRSF PIRSF006615 1 490 2.7E-199 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 M634_10240 699f8ac722682e950733f96afd361e52 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 397 418 1.8E-44 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 M634_10240 699f8ac722682e950733f96afd361e52 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 241 260 1.8E-44 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 M634_10240 699f8ac722682e950733f96afd361e52 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 327 346 1.8E-44 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 M634_10240 699f8ac722682e950733f96afd361e52 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 145 165 1.8E-44 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 M634_10240 699f8ac722682e950733f96afd361e52 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 441 459 1.8E-44 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 M634_10240 699f8ac722682e950733f96afd361e52 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 288 304 1.8E-44 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 M634_10240 699f8ac722682e950733f96afd361e52 490 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 261 280 1.8E-44 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 M634_10240 699f8ac722682e950733f96afd361e52 490 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 9 489 2.7E-93 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 M634_02900 708140f7b323d859d9faed3cebf9ee6d 325 SUPERFAMILY SSF53448 1 254 2.49E-32 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M634_02900 708140f7b323d859d9faed3cebf9ee6d 325 Gene3D G3DSA:3.90.550.10 1 177 1.8E-29 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M634_02900 708140f7b323d859d9faed3cebf9ee6d 325 Pfam PF00535 Glycosyl transferase family 2 4 159 2.4E-28 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 M634_16530 925b71112274a1e7e7c886e446d9eb2e 343 Pfam PF13579 Glycosyl transferase 4-like domain 63 159 9.2E-13 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 M634_16530 925b71112274a1e7e7c886e446d9eb2e 343 Pfam PF13692 Glycosyl transferases group 1 182 311 2.4E-14 T 12-10-2018 M634_16530 925b71112274a1e7e7c886e446d9eb2e 343 Gene3D G3DSA:3.40.50.2000 183 333 5.5E-17 T 12-10-2018 M634_16530 925b71112274a1e7e7c886e446d9eb2e 343 Gene3D G3DSA:3.40.50.2000 3 182 3.8E-13 T 12-10-2018 M634_16530 925b71112274a1e7e7c886e446d9eb2e 343 SUPERFAMILY SSF53756 1 342 4.71E-38 T 12-10-2018 M634_21230 e358c76a473a01aa432a31fc2b98ec27 334 SUPERFAMILY SSF53822 32 296 1.1E-38 T 12-10-2018 IPR028082 Periplasmic binding protein-like I M634_21230 e358c76a473a01aa432a31fc2b98ec27 334 Gene3D G3DSA:3.40.50.2300 140 326 2.3E-120 T 12-10-2018 M634_21230 e358c76a473a01aa432a31fc2b98ec27 334 Gene3D G3DSA:3.40.50.2300 33 302 2.3E-120 T 12-10-2018 M634_21230 e358c76a473a01aa432a31fc2b98ec27 334 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 31 302 1.3E-31 T 12-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain M634_21230 e358c76a473a01aa432a31fc2b98ec27 334 TIGRFAM TIGR02955 TMAO_TorT: TMAO reductase system periplasmic protein TorT 32 330 9.8E-135 T 12-10-2018 IPR014301 TMAO reductase system, periplasmic protein TorT M634_24155 785c4fdc7584e26eda807b337e646f19 176 Pfam PF13302 Acetyltransferase (GNAT) domain 6 139 6.8E-20 T 12-10-2018 IPR000182 GNAT domain M634_24155 785c4fdc7584e26eda807b337e646f19 176 Gene3D G3DSA:3.40.630.30 5 173 7.1E-50 T 12-10-2018 M634_24155 785c4fdc7584e26eda807b337e646f19 176 SUPERFAMILY SSF55729 4 164 3.72E-41 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_20455 cba3852a0a231abba59f59710dcb4ce1 151 Pfam PF01047 MarR family 37 95 5.1E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M634_20455 cba3852a0a231abba59f59710dcb4ce1 151 Gene3D G3DSA:1.10.10.10 11 147 2.8E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_20455 cba3852a0a231abba59f59710dcb4ce1 151 SMART SM00347 30 131 5.8E-24 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M634_20455 cba3852a0a231abba59f59710dcb4ce1 151 SUPERFAMILY SSF46785 10 145 1.04E-30 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_20455 cba3852a0a231abba59f59710dcb4ce1 151 ProSitePatterns PS01117 MarR-type HTH domain signature. 70 104 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site M634_20455 cba3852a0a231abba59f59710dcb4ce1 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 121 141 1.4E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M634_20455 cba3852a0a231abba59f59710dcb4ce1 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 1.4E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M634_20455 cba3852a0a231abba59f59710dcb4ce1 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 1.4E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M634_20455 cba3852a0a231abba59f59710dcb4ce1 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 71 1.4E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M634_22905 f3122a68fe3efba4a84a3224942a6b88 507 PIRSF PIRSF001021 2 507 1.7E-228 T 12-10-2018 IPR013776 Alpha-amylase, thermostable GO:0004553|GO:0005509|GO:0005975 KEGG: 00500+3.2.1.1 M634_22905 f3122a68fe3efba4a84a3224942a6b88 507 Gene3D G3DSA:2.40.30.140 127 229 1.2E-156 T 12-10-2018 M634_22905 f3122a68fe3efba4a84a3224942a6b88 507 Gene3D G3DSA:3.20.20.80 28 392 1.2E-156 T 12-10-2018 M634_22905 f3122a68fe3efba4a84a3224942a6b88 507 Gene3D G3DSA:2.60.40.1180 423 505 2.2E-26 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta M634_22905 f3122a68fe3efba4a84a3224942a6b88 507 SMART SM00642 27 417 1.5E-59 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 M634_22905 f3122a68fe3efba4a84a3224942a6b88 507 Pfam PF00128 Alpha amylase, catalytic domain 56 387 1.0E-20 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 M634_22905 f3122a68fe3efba4a84a3224942a6b88 507 SUPERFAMILY SSF51011 420 504 6.99E-31 T 12-10-2018 M634_22905 f3122a68fe3efba4a84a3224942a6b88 507 SUPERFAMILY SSF51445 28 393 1.29E-94 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M634_18295 0522b58fb0ba3fe5eed8d6522329fa48 211 Pfam PF10026 Predicted Zn-dependent protease (DUF2268) 22 210 4.3E-44 T 12-10-2018 IPR018728 Domain of unknown function DUF2268 M634_04980 48d62efecba4bf5983b7465363ee0ef4 402 SUPERFAMILY SSF56349 98 383 1.18E-58 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 M634_04980 48d62efecba4bf5983b7465363ee0ef4 402 Gene3D G3DSA:1.10.443.10 204 392 3.9E-19 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 M634_04980 48d62efecba4bf5983b7465363ee0ef4 402 Pfam PF13356 Arm DNA-binding domain 2 88 1.0E-16 T 12-10-2018 IPR025166 Integrase, DNA-binding domain M634_04980 48d62efecba4bf5983b7465363ee0ef4 402 Gene3D G3DSA:1.10.150.130 102 194 1.3E-15 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal M634_04980 48d62efecba4bf5983b7465363ee0ef4 402 Pfam PF00589 Phage integrase family 205 373 8.1E-22 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 M634_04980 48d62efecba4bf5983b7465363ee0ef4 402 Gene3D G3DSA:3.30.160.390 1 101 3.0E-26 T 12-10-2018 IPR038488 Integrase, DNA-binding domain superfamily M634_23455 c3bbc8ee4b547e720cbe0c16001a8665 389 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 15 124 8.2E-35 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 M634_23455 c3bbc8ee4b547e720cbe0c16001a8665 389 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 343 362 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 M634_23455 c3bbc8ee4b547e720cbe0c16001a8665 389 Gene3D G3DSA:1.10.540.10 3 127 1.3E-43 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 M634_23455 c3bbc8ee4b547e720cbe0c16001a8665 389 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 238 384 1.3E-42 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 M634_23455 c3bbc8ee4b547e720cbe0c16001a8665 389 PIRSF PIRSF016578 134 389 3.8E-12 T 12-10-2018 M634_23455 c3bbc8ee4b547e720cbe0c16001a8665 389 PIRSF PIRSF016578 15 103 0.031 T 12-10-2018 M634_23455 c3bbc8ee4b547e720cbe0c16001a8665 389 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 131 143 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 M634_23455 c3bbc8ee4b547e720cbe0c16001a8665 389 Gene3D G3DSA:2.40.110.10 128 241 1.1E-41 T 12-10-2018 M634_23455 c3bbc8ee4b547e720cbe0c16001a8665 389 Gene3D G3DSA:1.20.140.10 242 389 3.1E-47 T 12-10-2018 M634_23455 c3bbc8ee4b547e720cbe0c16001a8665 389 SUPERFAMILY SSF47203 236 386 2.42E-46 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 M634_23455 c3bbc8ee4b547e720cbe0c16001a8665 389 SUPERFAMILY SSF56645 5 249 2.49E-81 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 M634_23455 c3bbc8ee4b547e720cbe0c16001a8665 389 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 224 1.8E-23 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 M634_18050 d54c4ab3b59e5452780503b81e247d2b 79 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 73 3.6E-19 T 12-10-2018 IPR000504 RNA recognition motif domain GO:0003676 M634_18050 d54c4ab3b59e5452780503b81e247d2b 79 SMART SM00360 2 75 2.6E-21 T 12-10-2018 IPR000504 RNA recognition motif domain GO:0003676 M634_18050 d54c4ab3b59e5452780503b81e247d2b 79 Gene3D G3DSA:3.30.70.330 1 79 2.0E-23 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily M634_18050 d54c4ab3b59e5452780503b81e247d2b 79 SUPERFAMILY SSF54928 2 78 9.81E-24 T 12-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 M634_02935 4314ebc0b1c188f2ea3b0263d54340d4 557 Pfam PF00672 HAMP domain 229 276 8.9E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_02935 4314ebc0b1c188f2ea3b0263d54340d4 557 SMART SM00283 295 556 3.0E-58 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_02935 4314ebc0b1c188f2ea3b0263d54340d4 557 SUPERFAMILY SSF58104 248 557 9.16E-74 T 12-10-2018 M634_02935 4314ebc0b1c188f2ea3b0263d54340d4 557 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 367 523 1.2E-38 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_02935 4314ebc0b1c188f2ea3b0263d54340d4 557 SMART SM01049 44 133 2.8E-31 T 12-10-2018 IPR033480 Single Cache domain 2 M634_02935 4314ebc0b1c188f2ea3b0263d54340d4 557 Gene3D G3DSA:3.30.450.20 38 183 3.2E-55 T 12-10-2018 M634_02935 4314ebc0b1c188f2ea3b0263d54340d4 557 Gene3D G3DSA:1.10.287.950 226 557 5.0E-71 T 12-10-2018 M634_02935 4314ebc0b1c188f2ea3b0263d54340d4 557 Pfam PF17200 Single Cache domain 2 47 189 2.2E-38 T 12-10-2018 IPR033480 Single Cache domain 2 M634_02935 4314ebc0b1c188f2ea3b0263d54340d4 557 SMART SM00304 226 280 1.8E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_21910 1d53418e90cb3e1a053d5d543e130fcf 214 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 17 185 1.4E-28 T 12-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_21910 1d53418e90cb3e1a053d5d543e130fcf 214 Gene3D G3DSA:3.30.420.10 9 184 7.2E-48 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M634_21910 1d53418e90cb3e1a053d5d543e130fcf 214 SUPERFAMILY SSF53098 11 186 3.12E-52 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M634_21910 1d53418e90cb3e1a053d5d543e130fcf 214 SMART SM00479 16 183 4.1E-40 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III M634_21910 1d53418e90cb3e1a053d5d543e130fcf 214 Pfam PF00929 Exonuclease 18 173 3.5E-30 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III M634_23605 1afb4d8f517a5b487ede1b6b3fd395b4 212 Pfam PF01470 Pyroglutamyl peptidase 2 199 8.0E-76 T 12-10-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like MetaCyc: PWY-7942 M634_23605 1afb4d8f517a5b487ede1b6b3fd395b4 212 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 130 144 - T 12-10-2018 IPR033694 Pyroglutamyl peptidase I, Cys active site MetaCyc: PWY-7942 M634_23605 1afb4d8f517a5b487ede1b6b3fd395b4 212 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 2 198 38.411 T 12-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 M634_23605 1afb4d8f517a5b487ede1b6b3fd395b4 212 PIRSF PIRSF015592 1 210 6.4E-82 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 M634_23605 1afb4d8f517a5b487ede1b6b3fd395b4 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 132 148 6.6E-45 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 M634_23605 1afb4d8f517a5b487ede1b6b3fd395b4 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 62 74 6.6E-45 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 M634_23605 1afb4d8f517a5b487ede1b6b3fd395b4 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 80 100 6.6E-45 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 M634_23605 1afb4d8f517a5b487ede1b6b3fd395b4 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 4 27 6.6E-45 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 M634_23605 1afb4d8f517a5b487ede1b6b3fd395b4 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 160 172 6.6E-45 T 12-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 M634_23605 1afb4d8f517a5b487ede1b6b3fd395b4 212 SUPERFAMILY SSF53182 1 211 1.18E-69 T 12-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 M634_23605 1afb4d8f517a5b487ede1b6b3fd395b4 212 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 69 85 - T 12-10-2018 IPR033693 Pyroglutamyl peptidase I, Glu active site MetaCyc: PWY-7942 M634_23605 1afb4d8f517a5b487ede1b6b3fd395b4 212 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 3 211 2.1E-75 T 12-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 M634_23605 1afb4d8f517a5b487ede1b6b3fd395b4 212 Gene3D G3DSA:3.40.630.20 1 212 1.3E-76 T 12-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 M634_01930 76e96d1aad10f6565f3772d07ce24dd0 467 Gene3D G3DSA:1.10.1140.10 352 467 2.6E-53 T 12-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M634_01930 76e96d1aad10f6565f3772d07ce24dd0 467 SMART SM00382 142 334 5.9E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_01930 76e96d1aad10f6565f3772d07ce24dd0 467 SUPERFAMILY SSF50615 1 75 2.17E-25 T 12-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M634_01930 76e96d1aad10f6565f3772d07ce24dd0 467 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 467 55.912 T 12-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 M634_01930 76e96d1aad10f6565f3772d07ce24dd0 467 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 349 4.5E-60 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M634_01930 76e96d1aad10f6565f3772d07ce24dd0 467 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 340 349 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M634_01930 76e96d1aad10f6565f3772d07ce24dd0 467 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 467 2.1E-248 T 12-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 M634_01930 76e96d1aad10f6565f3772d07ce24dd0 467 Gene3D G3DSA:3.40.50.300 76 351 1.4E-110 T 12-10-2018 M634_01930 76e96d1aad10f6565f3772d07ce24dd0 467 SUPERFAMILY SSF47917 352 466 1.83E-50 T 12-10-2018 M634_01930 76e96d1aad10f6565f3772d07ce24dd0 467 Gene3D G3DSA:2.40.10.170 2 75 5.5E-30 T 12-10-2018 M634_01930 76e96d1aad10f6565f3772d07ce24dd0 467 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 73 1.2E-20 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M634_01930 76e96d1aad10f6565f3772d07ce24dd0 467 SUPERFAMILY SSF52540 77 355 5.8E-85 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_00440 38a153d8e69695ecc117d93c71facc75 263 SMART SM01150 3 262 2.1E-119 T 12-10-2018 IPR009770 Domain of unknown function DUF1338 M634_00440 38a153d8e69695ecc117d93c71facc75 263 Pfam PF07063 Domain of unknown function (DUF1338) 31 261 1.9E-47 T 12-10-2018 IPR009770 Domain of unknown function DUF1338 M634_00440 38a153d8e69695ecc117d93c71facc75 263 Gene3D G3DSA:3.10.180.50 3 239 1.7E-94 T 12-10-2018 M634_06245 c679408a8793d4ce25b56c3660d1269b 941 Gene3D G3DSA:3.40.50.12470 557 803 1.5E-172 T 12-10-2018 M634_06245 c679408a8793d4ce25b56c3660d1269b 941 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 791 933 4.0E-55 T 12-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 M634_06245 c679408a8793d4ce25b56c3660d1269b 941 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 933 0.0 T 12-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 M634_06245 c679408a8793d4ce25b56c3660d1269b 941 Gene3D G3DSA:3.40.50.970 168 534 4.7E-146 T 12-10-2018 M634_06245 c679408a8793d4ce25b56c3660d1269b 941 Gene3D G3DSA:1.10.287.1150 85 167 1.1E-30 T 12-10-2018 M634_06245 c679408a8793d4ce25b56c3660d1269b 941 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 50 1.1E-13 T 12-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 M634_06245 c679408a8793d4ce25b56c3660d1269b 941 SUPERFAMILY SSF52518 122 532 3.53E-88 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold M634_06245 c679408a8793d4ce25b56c3660d1269b 941 Gene3D G3DSA:3.40.50.11610 724 930 1.5E-172 T 12-10-2018 M634_06245 c679408a8793d4ce25b56c3660d1269b 941 Pfam PF00676 Dehydrogenase E1 component 221 514 4.8E-48 T 12-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 M634_06245 c679408a8793d4ce25b56c3660d1269b 941 SUPERFAMILY SSF52518 577 794 3.62E-53 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold M634_06245 c679408a8793d4ce25b56c3660d1269b 941 SMART SM00861 594 787 4.0E-64 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain M634_06245 c679408a8793d4ce25b56c3660d1269b 941 PIRSF PIRSF000157 1 935 0.0 T 12-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 M634_06245 c679408a8793d4ce25b56c3660d1269b 941 Pfam PF02779 Transketolase, pyrimidine binding domain 593 788 8.6E-67 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain M634_08515 53523249d87f9203e0ad5eda44424e63 344 Pfam PF01370 NAD dependent epimerase/dehydratase family 31 273 6.1E-39 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 M634_08515 53523249d87f9203e0ad5eda44424e63 344 Gene3D G3DSA:3.40.50.720 27 344 1.5E-72 T 12-10-2018 M634_08515 53523249d87f9203e0ad5eda44424e63 344 SUPERFAMILY SSF51735 23 343 2.27E-63 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_02775 904572ce771db18d1a609437f1f34817 430 Gene3D G3DSA:3.30.565.10 284 430 9.9E-36 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_02775 904572ce771db18d1a609437f1f34817 430 SUPERFAMILY SSF47384 215 277 5.49E-12 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M634_02775 904572ce771db18d1a609437f1f34817 430 SUPERFAMILY SSF55874 285 429 3.14E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_02775 904572ce771db18d1a609437f1f34817 430 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 323 428 6.0E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_02775 904572ce771db18d1a609437f1f34817 430 SMART SM00387 321 430 3.1E-26 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_02775 904572ce771db18d1a609437f1f34817 430 Pfam PF00512 His Kinase A (phospho-acceptor) domain 225 276 2.7E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_02775 904572ce771db18d1a609437f1f34817 430 Gene3D G3DSA:1.10.287.130 167 277 1.2E-23 T 12-10-2018 M634_02775 904572ce771db18d1a609437f1f34817 430 SMART SM00304 169 221 9.5E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_02775 904572ce771db18d1a609437f1f34817 430 SMART SM00388 222 282 2.3E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_02775 904572ce771db18d1a609437f1f34817 430 SUPERFAMILY SSF158472 171 219 7.06E-5 T 12-10-2018 M634_02775 904572ce771db18d1a609437f1f34817 430 Pfam PF00672 HAMP domain 169 217 3.7E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_02775 904572ce771db18d1a609437f1f34817 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 386 1.4E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_02775 904572ce771db18d1a609437f1f34817 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 372 1.4E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_02775 904572ce771db18d1a609437f1f34817 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 409 1.4E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_11875 0978cbfc48bd1de3fdabefababc8c190 235 Pfam PF13489 Methyltransferase domain 52 201 1.1E-26 T 12-10-2018 M634_11875 0978cbfc48bd1de3fdabefababc8c190 235 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 11 229 1.9E-87 T 12-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 M634_11875 0978cbfc48bd1de3fdabefababc8c190 235 Gene3D G3DSA:3.40.50.150 11 235 4.8E-77 T 12-10-2018 M634_11875 0978cbfc48bd1de3fdabefababc8c190 235 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 11 235 37.559 T 12-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 M634_11875 0978cbfc48bd1de3fdabefababc8c190 235 SUPERFAMILY SSF53335 15 232 1.16E-45 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_06365 81ea30f2f3e2b0a9e81ddcf0a9f72ff7 87 Gene3D G3DSA:3.30.1070.10 1 84 1.9E-26 T 12-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 M634_06365 81ea30f2f3e2b0a9e81ddcf0a9f72ff7 87 SUPERFAMILY SSF55229 33 85 3.92E-17 T 12-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 M634_06365 81ea30f2f3e2b0a9e81ddcf0a9f72ff7 87 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 84 5.2E-34 T 12-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 M634_06365 81ea30f2f3e2b0a9e81ddcf0a9f72ff7 87 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 87 19.086 T 12-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 M634_06365 81ea30f2f3e2b0a9e81ddcf0a9f72ff7 87 Pfam PF03776 Septum formation topological specificity factor MinE 14 83 8.4E-24 T 12-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 M634_08730 09378f844f126ca078ee94b95dc91927 200 SUPERFAMILY SSF53254 1 187 1.01E-46 T 12-10-2018 IPR029033 Histidine phosphatase superfamily M634_08730 09378f844f126ca078ee94b95dc91927 200 Gene3D G3DSA:3.40.50.1240 1 193 1.2E-44 T 12-10-2018 IPR029033 Histidine phosphatase superfamily M634_08730 09378f844f126ca078ee94b95dc91927 200 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 179 1.6E-37 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 M634_08730 09378f844f126ca078ee94b95dc91927 200 PIRSF PIRSF000709 1 191 4.3E-16 T 12-10-2018 M634_08730 09378f844f126ca078ee94b95dc91927 200 SMART SM00855 4 158 2.8E-19 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 M634_08730 09378f844f126ca078ee94b95dc91927 200 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 7 16 - T 12-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 M634_16090 81e3f33023d4c7bec2e5878c2c798bad 290 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 263 2.5E-125 T 12-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 M634_16090 81e3f33023d4c7bec2e5878c2c798bad 290 SUPERFAMILY SSF53448 2 271 2.5E-65 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M634_16090 81e3f33023d4c7bec2e5878c2c798bad 290 Gene3D G3DSA:3.90.550.10 1 278 1.4E-82 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M634_16090 81e3f33023d4c7bec2e5878c2c798bad 290 Pfam PF00483 Nucleotidyl transferase 9 265 7.3E-32 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 M634_14895 263ae69592a8e0cbfd5f39542ed8fb74 148 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 111 135 - T 12-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site M634_14895 263ae69592a8e0cbfd5f39542ed8fb74 148 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 25 147 29.552 T 12-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 M634_14895 263ae69592a8e0cbfd5f39542ed8fb74 148 SUPERFAMILY SSF109635 8 107 1.7E-36 T 12-10-2018 IPR037187 DksA, N-terminal domain superfamily M634_14895 263ae69592a8e0cbfd5f39542ed8fb74 148 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 108 140 4.4E-10 T 12-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 M634_14895 263ae69592a8e0cbfd5f39542ed8fb74 148 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 29 137 7.7E-51 T 12-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 M634_14895 263ae69592a8e0cbfd5f39542ed8fb74 148 Gene3D G3DSA:1.20.120.910 17 147 3.2E-36 T 12-10-2018 M634_14895 263ae69592a8e0cbfd5f39542ed8fb74 148 SUPERFAMILY SSF57716 108 146 6.41E-10 T 12-10-2018 M634_14895 263ae69592a8e0cbfd5f39542ed8fb74 148 PRINTS PR00618 DksA/TraR zinc finger signature 111 122 8.9E-5 T 12-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria M634_14895 263ae69592a8e0cbfd5f39542ed8fb74 148 PRINTS PR00618 DksA/TraR zinc finger signature 123 135 8.9E-5 T 12-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria M634_05720 2a59cd1c543fd71155a3e0484e9b94d2 418 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 415 4.9E-144 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 M634_05720 2a59cd1c543fd71155a3e0484e9b94d2 418 SUPERFAMILY SSF51735 160 313 7.9E-38 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_05720 2a59cd1c543fd71155a3e0484e9b94d2 418 PIRSF PIRSF000445 1 418 9.1E-157 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 M634_05720 2a59cd1c543fd71155a3e0484e9b94d2 418 Gene3D G3DSA:3.30.460.30 1 156 1.8E-55 T 12-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 M634_05720 2a59cd1c543fd71155a3e0484e9b94d2 418 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 3.9E-49 T 12-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 M634_05720 2a59cd1c543fd71155a3e0484e9b94d2 418 SUPERFAMILY SSF69742 1 156 5.62E-47 T 12-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 M634_05720 2a59cd1c543fd71155a3e0484e9b94d2 418 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 30.723 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 M634_05720 2a59cd1c543fd71155a3e0484e9b94d2 418 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 170 304 2.8E-50 T 12-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase M634_05720 2a59cd1c543fd71155a3e0484e9b94d2 418 Gene3D G3DSA:3.40.50.720 159 311 2.8E-45 T 12-10-2018 M634_05720 2a59cd1c543fd71155a3e0484e9b94d2 418 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 12-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 M634_05720 2a59cd1c543fd71155a3e0484e9b94d2 418 SUPERFAMILY SSF69075 315 416 3.66E-29 T 12-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 M634_05720 2a59cd1c543fd71155a3e0484e9b94d2 418 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 318 414 6.3E-24 T 12-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 M634_01570 d31d04129a02cd89f86629d0c5bae7f8 304 SUPERFAMILY SSF103481 190 291 4.05E-9 T 12-10-2018 M634_01570 d31d04129a02cd89f86629d0c5bae7f8 304 SUPERFAMILY SSF103481 50 146 6.15E-14 T 12-10-2018 M634_01570 d31d04129a02cd89f86629d0c5bae7f8 304 TIGRFAM TIGR00688 rarD: protein RarD 11 264 3.5E-87 T 12-10-2018 IPR004626 RarD protein GO:0005887 M634_01570 d31d04129a02cd89f86629d0c5bae7f8 304 Pfam PF00892 EamA-like transporter family 12 145 1.6E-15 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M634_17970 d71139605329e4a84e6c496d8ecd4195 433 PIRSF PIRSF006066 4 433 1.3E-167 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 M634_17970 d71139605329e4a84e6c496d8ecd4195 433 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 10 422 1.4E-115 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit M634_17970 d71139605329e4a84e6c496d8ecd4195 433 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 20 427 4.4E-138 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 M634_17615 2c464e2df4029beb582f5ee418a0badb 289 Pfam PF08543 Phosphomethylpyrimidine kinase 75 260 2.0E-20 T 12-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 M634_17615 2c464e2df4029beb582f5ee418a0badb 289 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 285 2.2E-103 T 12-10-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 M634_17615 2c464e2df4029beb582f5ee418a0badb 289 Hamap MF_01639 Pyridoxal kinase PdxY [pdxY]. 1 284 52.771 T 12-10-2018 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282 M634_17615 2c464e2df4029beb582f5ee418a0badb 289 Gene3D G3DSA:3.40.1190.20 1 288 4.8E-86 T 12-10-2018 IPR029056 Ribokinase-like M634_17615 2c464e2df4029beb582f5ee418a0badb 289 SUPERFAMILY SSF53613 2 275 3.12E-68 T 12-10-2018 IPR029056 Ribokinase-like M634_20750 53b51771a7bdcde145c904b7c55a661f 302 SUPERFAMILY SSF51430 6 293 1.01E-69 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily M634_20750 53b51771a7bdcde145c904b7c55a661f 302 Pfam PF00248 Aldo/keto reductase family 16 291 4.0E-59 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain M634_20750 53b51771a7bdcde145c904b7c55a661f 302 Gene3D G3DSA:3.20.20.100 1 302 2.6E-100 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily M634_04100 12c41656d3bf24a2432f199024a47839 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.87 T 12-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid M634_04100 12c41656d3bf24a2432f199024a47839 130 Gene3D G3DSA:3.30.230.10 1 130 8.7E-54 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M634_04100 12c41656d3bf24a2432f199024a47839 130 SUPERFAMILY SSF54211 5 130 3.53E-48 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M634_04100 12c41656d3bf24a2432f199024a47839 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 12-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 M634_04100 12c41656d3bf24a2432f199024a47839 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 2.9E-46 T 12-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 M634_02690 7ef3e145b6942344542922ee0260e2d9 129 Pfam PF07963 Prokaryotic N-terminal methylation motif 13 38 5.2E-7 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M634_02690 7ef3e145b6942344542922ee0260e2d9 129 Pfam PF02501 Type II secretion system (T2SS), protein I 52 127 2.3E-21 T 12-10-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 M634_02690 7ef3e145b6942344542922ee0260e2d9 129 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 17 36 1.3E-5 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M634_02690 7ef3e145b6942344542922ee0260e2d9 129 Gene3D G3DSA:3.30.1300.30 42 129 2.6E-35 T 12-10-2018 M634_02690 7ef3e145b6942344542922ee0260e2d9 129 SUPERFAMILY SSF54523 49 127 1.06E-22 T 12-10-2018 M634_02690 7ef3e145b6942344542922ee0260e2d9 129 TIGRFAM TIGR01707 gspI: type II secretion system protein I 18 115 1.8E-36 T 12-10-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 M634_02690 7ef3e145b6942344542922ee0260e2d9 129 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 17 37 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M634_22795 f98298bcb364defced0bb9b54ddce92c 725 SUPERFAMILY SSF56935 40 723 7.33E-88 T 12-10-2018 M634_22795 f98298bcb364defced0bb9b54ddce92c 725 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 55 723 2.3E-81 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 M634_22795 f98298bcb364defced0bb9b54ddce92c 725 Pfam PF00593 TonB dependent receptor 249 722 1.9E-29 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel M634_22795 f98298bcb364defced0bb9b54ddce92c 725 Gene3D G3DSA:2.170.130.10 47 165 3.2E-22 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily M634_22795 f98298bcb364defced0bb9b54ddce92c 725 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 156 1.1E-17 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain M634_22795 f98298bcb364defced0bb9b54ddce92c 725 Gene3D G3DSA:2.40.170.20 172 725 7.8E-47 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily M634_05180 1b3dd0ef0f7ab78e341e532c582c959f 424 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 1.9E-37 T 12-10-2018 M634_05180 1b3dd0ef0f7ab78e341e532c582c959f 424 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 1.9E-37 T 12-10-2018 M634_05180 1b3dd0ef0f7ab78e341e532c582c959f 424 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 1.9E-37 T 12-10-2018 M634_05180 1b3dd0ef0f7ab78e341e532c582c959f 424 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 1.9E-37 T 12-10-2018 M634_05180 1b3dd0ef0f7ab78e341e532c582c959f 424 PRINTS PR00173 Glutamate-aspartate symporter signature 148 170 1.9E-37 T 12-10-2018 M634_05180 1b3dd0ef0f7ab78e341e532c582c959f 424 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 1.9E-37 T 12-10-2018 M634_05180 1b3dd0ef0f7ab78e341e532c582c959f 424 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 1.9E-37 T 12-10-2018 M634_05180 1b3dd0ef0f7ab78e341e532c582c959f 424 PRINTS PR00173 Glutamate-aspartate symporter signature 359 379 1.9E-37 T 12-10-2018 M634_05180 1b3dd0ef0f7ab78e341e532c582c959f 424 Pfam PF00375 Sodium:dicarboxylate symporter family 6 404 9.8E-115 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 M634_05180 1b3dd0ef0f7ab78e341e532c582c959f 424 SUPERFAMILY SSF118215 5 406 2.62E-105 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 M634_05180 1b3dd0ef0f7ab78e341e532c582c959f 424 Gene3D G3DSA:1.10.3860.10 1 422 1.2E-113 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 M634_20875 1e12fddf3f5a221fe92ca133385efae8 454 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 437 5.3E-163 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 M634_20875 1e12fddf3f5a221fe92ca133385efae8 454 PIRSF PIRSF006446 2 453 1.9E-214 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 M634_21375 f1b96485ebb32464dfbb38d438710021 200 Pfam PF04011 LemA family 11 200 7.5E-68 T 12-10-2018 IPR007156 LemA M634_21375 f1b96485ebb32464dfbb38d438710021 200 SUPERFAMILY SSF140478 29 186 4.97E-55 T 12-10-2018 IPR023353 LemA-like domain superfamily M634_21375 f1b96485ebb32464dfbb38d438710021 200 Gene3D G3DSA:1.20.1440.20 19 200 1.6E-62 T 12-10-2018 IPR023353 LemA-like domain superfamily M634_19270 3038d1a4e3ce32208d7f32646839ac94 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.3E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_19270 3038d1a4e3ce32208d7f32646839ac94 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.3E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_19270 3038d1a4e3ce32208d7f32646839ac94 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.3E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_19270 3038d1a4e3ce32208d7f32646839ac94 307 Gene3D G3DSA:3.40.190.10 163 263 1.4E-72 T 12-10-2018 M634_19270 3038d1a4e3ce32208d7f32646839ac94 307 Gene3D G3DSA:3.40.190.10 92 289 1.4E-72 T 12-10-2018 M634_19270 3038d1a4e3ce32208d7f32646839ac94 307 SUPERFAMILY SSF53850 89 294 4.65E-51 T 12-10-2018 M634_19270 3038d1a4e3ce32208d7f32646839ac94 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.0E-21 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_19270 3038d1a4e3ce32208d7f32646839ac94 307 Pfam PF03466 LysR substrate binding domain 88 292 4.3E-50 T 12-10-2018 IPR005119 LysR, substrate-binding M634_19270 3038d1a4e3ce32208d7f32646839ac94 307 SUPERFAMILY SSF46785 6 88 4.41E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_19270 3038d1a4e3ce32208d7f32646839ac94 307 Gene3D G3DSA:1.10.10.10 3 91 2.1E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_12355 28ed564f0fc09ea0f189747d52dbc9e0 353 Pfam PF01343 Peptidase family S49 166 314 2.2E-47 T 12-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 M634_12355 28ed564f0fc09ea0f189747d52dbc9e0 353 Pfam PF08496 Peptidase family S49 N-terminal 2 162 1.2E-56 T 12-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 M634_12355 28ed564f0fc09ea0f189747d52dbc9e0 353 Gene3D G3DSA:3.90.226.10 109 306 2.4E-45 T 12-10-2018 M634_12355 28ed564f0fc09ea0f189747d52dbc9e0 353 SUPERFAMILY SSF52096 103 303 7.85E-30 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily M634_12355 28ed564f0fc09ea0f189747d52dbc9e0 353 Gene3D G3DSA:3.40.1750.20 206 270 2.4E-45 T 12-10-2018 M634_20385 fcf6514cf3d0baf00ccf9f10631ce577 304 Pfam PF03466 LysR substrate binding domain 93 295 5.2E-21 T 12-10-2018 IPR005119 LysR, substrate-binding M634_20385 fcf6514cf3d0baf00ccf9f10631ce577 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 3.3E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_20385 fcf6514cf3d0baf00ccf9f10631ce577 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 3.3E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_20385 fcf6514cf3d0baf00ccf9f10631ce577 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 3.3E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_20385 fcf6514cf3d0baf00ccf9f10631ce577 304 Gene3D G3DSA:3.40.190.10 168 267 6.2E-48 T 12-10-2018 M634_20385 fcf6514cf3d0baf00ccf9f10631ce577 304 SUPERFAMILY SSF53850 88 294 1.99E-36 T 12-10-2018 M634_20385 fcf6514cf3d0baf00ccf9f10631ce577 304 Gene3D G3DSA:3.40.190.10 90 291 6.2E-48 T 12-10-2018 M634_20385 fcf6514cf3d0baf00ccf9f10631ce577 304 SUPERFAMILY SSF46785 2 84 3.12E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_20385 fcf6514cf3d0baf00ccf9f10631ce577 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 2.0E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_20385 fcf6514cf3d0baf00ccf9f10631ce577 304 Gene3D G3DSA:1.10.10.10 1 86 1.2E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_11995 df234be8761e36b0271ec6e4a505d100 285 Gene3D G3DSA:3.20.20.140 3 250 9.0E-83 T 12-10-2018 M634_11995 df234be8761e36b0271ec6e4a505d100 285 SUPERFAMILY SSF89550 1 275 8.63E-55 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 M634_11995 df234be8761e36b0271ec6e4a505d100 285 Gene3D G3DSA:1.10.150.650 98 169 9.0E-83 T 12-10-2018 M634_11995 df234be8761e36b0271ec6e4a505d100 285 Pfam PF02811 PHP domain 4 181 9.4E-11 T 12-10-2018 IPR004013 PHP domain GO:0003824 M634_11995 df234be8761e36b0271ec6e4a505d100 285 SMART SM00481 3 70 2.5E-18 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal M634_05955 6d44e15ae02a58018e1bee59dafccb02 374 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 140 3.1E-33 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 M634_05955 6d44e15ae02a58018e1bee59dafccb02 374 Gene3D G3DSA:2.170.280.10 185 281 2.3E-36 T 12-10-2018 M634_05955 6d44e15ae02a58018e1bee59dafccb02 374 Gene3D G3DSA:1.20.58.1830 339 373 2.3E-36 T 12-10-2018 M634_05955 6d44e15ae02a58018e1bee59dafccb02 374 Gene3D G3DSA:1.20.58.1830 5 32 2.6E-57 T 12-10-2018 M634_05955 6d44e15ae02a58018e1bee59dafccb02 374 Pfam PF07196 Flagellin hook IN motif 200 245 3.7E-7 T 12-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 M634_05955 6d44e15ae02a58018e1bee59dafccb02 374 Pfam PF00700 Bacterial flagellin C-terminal helical region 289 373 3.9E-21 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 M634_05955 6d44e15ae02a58018e1bee59dafccb02 374 Gene3D G3DSA:1.20.1330.10 44 165 2.6E-57 T 12-10-2018 M634_05955 6d44e15ae02a58018e1bee59dafccb02 374 Gene3D G3DSA:1.20.1330.10 282 333 2.3E-36 T 12-10-2018 M634_05955 6d44e15ae02a58018e1bee59dafccb02 374 SUPERFAMILY SSF64518 1 373 6.54E-78 T 12-10-2018 M634_05955 6d44e15ae02a58018e1bee59dafccb02 374 PRINTS PR00207 Flagellin signature 36 53 2.2E-21 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 M634_05955 6d44e15ae02a58018e1bee59dafccb02 374 PRINTS PR00207 Flagellin signature 110 133 2.2E-21 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 M634_05955 6d44e15ae02a58018e1bee59dafccb02 374 PRINTS PR00207 Flagellin signature 75 94 2.2E-21 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 M634_16415 45292016a7d052cc07d8b32528e5b946 198 Pfam PF09618 CRISPR-associated protein (Cas_Csy4) 5 196 1.7E-36 T 12-10-2018 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST GO:0004519|GO:0043571 M634_16415 45292016a7d052cc07d8b32528e5b946 198 Gene3D G3DSA:3.30.70.2540 4 188 1.9E-18 T 12-10-2018 M634_16415 45292016a7d052cc07d8b32528e5b946 198 TIGRFAM TIGR02563 cas_Csy4: CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST 4 198 1.7E-64 T 12-10-2018 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST GO:0004519|GO:0043571 M634_16415 45292016a7d052cc07d8b32528e5b946 198 Gene3D G3DSA:1.10.8.890 110 141 1.9E-18 T 12-10-2018 M634_15775 027d1f1cc4a827f965d5d8427c99b64c 134 Pfam PF09834 Predicted membrane protein (DUF2061) 66 115 2.7E-20 T 12-10-2018 IPR018638 Domain of unknown function DUF2061, membrane M634_15775 027d1f1cc4a827f965d5d8427c99b64c 134 Pfam PF09834 Predicted membrane protein (DUF2061) 1 52 8.4E-21 T 12-10-2018 IPR018638 Domain of unknown function DUF2061, membrane M634_22180 6ec02584f210b30f62488c5296e9bd28 417 Pfam PF00271 Helicase conserved C-terminal domain 233 338 1.1E-27 T 12-10-2018 IPR001650 Helicase, C-terminal M634_22180 6ec02584f210b30f62488c5296e9bd28 417 SMART SM00490 257 338 4.6E-32 T 12-10-2018 IPR001650 Helicase, C-terminal M634_22180 6ec02584f210b30f62488c5296e9bd28 417 Pfam PF00270 DEAD/DEAH box helicase 27 194 8.3E-56 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 M634_22180 6ec02584f210b30f62488c5296e9bd28 417 Gene3D G3DSA:3.40.50.300 1 217 3.2E-79 T 12-10-2018 M634_22180 6ec02584f210b30f62488c5296e9bd28 417 SMART SM00487 22 221 1.0E-62 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M634_22180 6ec02584f210b30f62488c5296e9bd28 417 SUPERFAMILY SSF52540 74 359 7.85E-78 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_22180 6ec02584f210b30f62488c5296e9bd28 417 Gene3D G3DSA:3.40.50.300 218 415 7.4E-48 T 12-10-2018 M634_22180 6ec02584f210b30f62488c5296e9bd28 417 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site M634_00390 3c080a5998c3ee7509ab90c2b893cb31 193 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 136 2.4E-11 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain M634_00390 3c080a5998c3ee7509ab90c2b893cb31 193 Gene3D G3DSA:3.10.50.40 3 154 2.2E-58 T 12-10-2018 M634_00390 3c080a5998c3ee7509ab90c2b893cb31 193 SUPERFAMILY SSF54534 2 138 3.14E-34 T 12-10-2018 M634_00390 3c080a5998c3ee7509ab90c2b893cb31 193 Gene3D G3DSA:2.40.10.330 71 121 2.2E-58 T 12-10-2018 M634_16780 ef3ff3cf81a8b7a4741c880ef8511db0 547 SUPERFAMILY SSF58104 239 547 2.09E-69 T 12-10-2018 M634_16780 ef3ff3cf81a8b7a4741c880ef8511db0 547 Pfam PF00672 HAMP domain 219 267 6.8E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_16780 ef3ff3cf81a8b7a4741c880ef8511db0 547 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 348 512 1.6E-40 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_16780 ef3ff3cf81a8b7a4741c880ef8511db0 547 Gene3D G3DSA:1.10.287.950 217 547 2.9E-69 T 12-10-2018 M634_16780 ef3ff3cf81a8b7a4741c880ef8511db0 547 SMART SM00283 285 546 2.4E-65 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_16780 ef3ff3cf81a8b7a4741c880ef8511db0 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 412 441 4.8E-7 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M634_16780 ef3ff3cf81a8b7a4741c880ef8511db0 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 299 328 4.8E-7 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M634_16780 ef3ff3cf81a8b7a4741c880ef8511db0 547 SMART SM00304 218 270 2.6E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_20440 087c2773dab87a25b269ac56b6c8e005 106 SMART SM00465 7 86 1.1E-4 T 12-10-2018 IPR000305 GIY-YIG endonuclease M634_20440 087c2773dab87a25b269ac56b6c8e005 106 Pfam PF01541 GIY-YIG catalytic domain 9 80 1.4E-16 T 12-10-2018 IPR000305 GIY-YIG endonuclease M634_20440 087c2773dab87a25b269ac56b6c8e005 106 SUPERFAMILY SSF82771 9 79 2.62E-14 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 M634_20440 087c2773dab87a25b269ac56b6c8e005 106 Gene3D G3DSA:3.40.1440.10 3 102 1.2E-28 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 M634_15380 a0a039387c83674ea0e1c5d861cc2d92 230 Pfam PF04402 Protein of unknown function (DUF541) 29 227 2.2E-41 T 12-10-2018 IPR007497 Protein of unknown function DUF541 M634_15380 a0a039387c83674ea0e1c5d861cc2d92 230 Gene3D G3DSA:3.30.110.170 31 227 1.0E-48 T 12-10-2018 M634_15380 a0a039387c83674ea0e1c5d861cc2d92 230 Gene3D G3DSA:3.30.70.2970 41 148 1.0E-48 T 12-10-2018 M634_04965 0f3317a408ae13f727a847ed43391c2d 443 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 356 2.0E-134 T 12-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 M634_04965 0f3317a408ae13f727a847ed43391c2d 443 Pfam PF13742 OB-fold nucleic acid binding domain 10 103 5.9E-30 T 12-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 M634_04965 0f3317a408ae13f727a847ed43391c2d 443 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 443 31.281 T 12-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 M634_04965 0f3317a408ae13f727a847ed43391c2d 443 Pfam PF02601 Exonuclease VII, large subunit 126 440 1.1E-102 T 12-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 M634_24125 18bee6819dca578fa51168c87ea15b23 1046 SUPERFAMILY SSF82866 294 498 6.8E-43 T 12-10-2018 M634_24125 18bee6819dca578fa51168c87ea15b23 1046 Gene3D G3DSA:3.30.2090.10 716 804 1.7E-275 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_24125 18bee6819dca578fa51168c87ea15b23 1046 SUPERFAMILY SSF82866 798 1038 5.89E-52 T 12-10-2018 M634_24125 18bee6819dca578fa51168c87ea15b23 1046 Gene3D G3DSA:3.30.2090.10 182 274 1.7E-275 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_24125 18bee6819dca578fa51168c87ea15b23 1046 SUPERFAMILY SSF82714 185 269 3.27E-17 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_24125 18bee6819dca578fa51168c87ea15b23 1046 SUPERFAMILY SSF82693 46 127 5.49E-20 T 12-10-2018 M634_24125 18bee6819dca578fa51168c87ea15b23 1046 Gene3D G3DSA:3.30.70.1440 665 862 1.7E-275 T 12-10-2018 M634_24125 18bee6819dca578fa51168c87ea15b23 1046 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 2.7E-32 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_24125 18bee6819dca578fa51168c87ea15b23 1046 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 2.7E-32 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_24125 18bee6819dca578fa51168c87ea15b23 1046 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 2.7E-32 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_24125 18bee6819dca578fa51168c87ea15b23 1046 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 2.7E-32 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_24125 18bee6819dca578fa51168c87ea15b23 1046 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 2.7E-32 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_24125 18bee6819dca578fa51168c87ea15b23 1046 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 2.7E-32 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_24125 18bee6819dca578fa51168c87ea15b23 1046 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 2.7E-32 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_24125 18bee6819dca578fa51168c87ea15b23 1046 Gene3D G3DSA:3.30.70.1430 562 664 1.7E-275 T 12-10-2018 M634_24125 18bee6819dca578fa51168c87ea15b23 1046 Gene3D G3DSA:3.30.70.1320 135 328 1.7E-275 T 12-10-2018 M634_24125 18bee6819dca578fa51168c87ea15b23 1046 SUPERFAMILY SSF82714 716 800 3.27E-18 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains M634_24125 18bee6819dca578fa51168c87ea15b23 1046 Gene3D G3DSA:1.20.1640.10 15 508 1.7E-275 T 12-10-2018 M634_24125 18bee6819dca578fa51168c87ea15b23 1046 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1042 0.0 T 12-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 M634_24125 18bee6819dca578fa51168c87ea15b23 1046 Gene3D G3DSA:3.30.70.1430 42 812 1.7E-275 T 12-10-2018 M634_24125 18bee6819dca578fa51168c87ea15b23 1046 SUPERFAMILY SSF82693 137 328 3.66E-23 T 12-10-2018 M634_24125 18bee6819dca578fa51168c87ea15b23 1046 Gene3D G3DSA:1.20.1640.10 509 1030 1.7E-275 T 12-10-2018 M634_24125 18bee6819dca578fa51168c87ea15b23 1046 Pfam PF00873 AcrB/AcrD/AcrF family 5 1032 6.3E-245 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 M634_03970 4e20848e1483e0fc1422e19e71f582a5 119 Pfam PF02152 Dihydroneopterin aldolase 6 115 2.4E-32 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 M634_03970 4e20848e1483e0fc1422e19e71f582a5 119 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 116 2.1E-30 T 12-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 M634_03970 4e20848e1483e0fc1422e19e71f582a5 119 TIGRFAM TIGR00526 folB_dom: FolB domain 4 117 1.1E-36 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 M634_03970 4e20848e1483e0fc1422e19e71f582a5 119 Gene3D G3DSA:3.30.1130.10 1 118 1.0E-45 T 12-10-2018 M634_03970 4e20848e1483e0fc1422e19e71f582a5 119 SMART SM00905 6 116 7.0E-49 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 M634_03970 4e20848e1483e0fc1422e19e71f582a5 119 SUPERFAMILY SSF55620 3 117 2.39E-37 T 12-10-2018 M634_20180 16535ed73e7c07cfa3e5bb947f8fb45f 389 SMART SM00936 280 370 8.3E-30 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M634_20180 16535ed73e7c07cfa3e5bb947f8fb45f 389 Gene3D G3DSA:3.40.710.10 19 278 1.8E-89 T 12-10-2018 M634_20180 16535ed73e7c07cfa3e5bb947f8fb45f 389 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 30 260 2.2E-84 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 M634_20180 16535ed73e7c07cfa3e5bb947f8fb45f 389 Gene3D G3DSA:2.60.410.10 280 370 3.2E-28 T 12-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M634_20180 16535ed73e7c07cfa3e5bb947f8fb45f 389 SUPERFAMILY SSF69189 280 372 3.34E-25 T 12-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M634_20180 16535ed73e7c07cfa3e5bb947f8fb45f 389 SUPERFAMILY SSF56601 9 280 5.39E-84 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like M634_20180 16535ed73e7c07cfa3e5bb947f8fb45f 389 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 280 370 7.2E-23 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M634_20180 16535ed73e7c07cfa3e5bb947f8fb45f 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 146 159 7.3E-18 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 M634_20180 16535ed73e7c07cfa3e5bb947f8fb45f 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 119 136 7.3E-18 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 M634_20180 16535ed73e7c07cfa3e5bb947f8fb45f 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 63 74 7.3E-18 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 M634_01965 2bc4d2700bd1a83797bb4e5e283a3b08 515 Gene3D G3DSA:3.40.1020.10 339 515 3.0E-72 T 12-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 M634_01965 2bc4d2700bd1a83797bb4e5e283a3b08 515 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 30 317 1.4E-85 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme M634_01965 2bc4d2700bd1a83797bb4e5e283a3b08 515 SUPERFAMILY SSF55021 338 424 1.3E-27 T 12-10-2018 M634_01965 2bc4d2700bd1a83797bb4e5e283a3b08 515 Gene3D G3DSA:3.40.50.1100 26 328 2.3E-135 T 12-10-2018 M634_01965 2bc4d2700bd1a83797bb4e5e283a3b08 515 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 16 514 2.6E-252 T 12-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 M634_01965 2bc4d2700bd1a83797bb4e5e283a3b08 515 SUPERFAMILY SSF55021 421 514 5.95E-27 T 12-10-2018 M634_01965 2bc4d2700bd1a83797bb4e5e283a3b08 515 SUPERFAMILY SSF53686 16 366 9.95E-108 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme M634_01965 2bc4d2700bd1a83797bb4e5e283a3b08 515 Gene3D G3DSA:3.40.50.1100 62 158 2.3E-135 T 12-10-2018 M634_01965 2bc4d2700bd1a83797bb4e5e283a3b08 515 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 330 420 1.3E-25 T 12-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 M634_01965 2bc4d2700bd1a83797bb4e5e283a3b08 515 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 428 514 4.5E-27 T 12-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 M634_01965 2bc4d2700bd1a83797bb4e5e283a3b08 515 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 54 67 - T 12-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 M634_20050 93adba82eae95b8035c26254c291ab24 170 Gene3D G3DSA:2.60.120.10 13 159 4.4E-48 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M634_20050 93adba82eae95b8035c26254c291ab24 170 Pfam PF12973 ChrR Cupin-like domain 28 105 7.3E-8 T 12-10-2018 IPR025979 ChrR-like cupin domain M634_20050 93adba82eae95b8035c26254c291ab24 170 SUPERFAMILY SSF51182 28 140 1.12E-22 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily M634_00850 56e9e8a8af3376ec44820c953bdaedff 581 Pfam PF03471 Transporter associated domain 497 570 1.7E-7 T 12-10-2018 IPR005170 Transporter-associated domain M634_00850 56e9e8a8af3376ec44820c953bdaedff 581 Pfam PF00999 Sodium/hydrogen exchanger family 15 386 2.4E-57 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 M634_00850 56e9e8a8af3376ec44820c953bdaedff 581 Pfam PF02080 TrkA-C domain 417 484 4.2E-13 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 M634_00850 56e9e8a8af3376ec44820c953bdaedff 581 Gene3D G3DSA:1.20.1530.20 7 392 2.9E-22 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily M634_00850 56e9e8a8af3376ec44820c953bdaedff 581 Gene3D G3DSA:3.30.465.10 497 581 4.4E-6 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 M634_00850 56e9e8a8af3376ec44820c953bdaedff 581 SUPERFAMILY SSF116726 413 481 6.54E-10 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 M634_00850 56e9e8a8af3376ec44820c953bdaedff 581 SMART SM01091 493 572 1.1E-9 T 12-10-2018 IPR005170 Transporter-associated domain M634_00850 56e9e8a8af3376ec44820c953bdaedff 581 SUPERFAMILY SSF56176 499 570 6.27E-8 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 M634_00850 56e9e8a8af3376ec44820c953bdaedff 581 Hamap MF_01075 K(+)/H(+) antiporter NhaP2 [nhaP2]. 1 575 51.325 T 12-10-2018 IPR023729 K(+)/H(+) antiporter NhaP2 GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0016021 M634_00850 56e9e8a8af3376ec44820c953bdaedff 581 Gene3D G3DSA:3.30.70.1450 407 483 9.4E-12 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 M634_15870 81a7c94ffdd5e2e9e202302708a8756e 187 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 5 182 3.4E-48 T 12-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 M634_15870 81a7c94ffdd5e2e9e202302708a8756e 187 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 9 183 5.7E-46 T 12-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related M634_15870 81a7c94ffdd5e2e9e202302708a8756e 187 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 3 185 23.418 T 12-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 M634_15870 81a7c94ffdd5e2e9e202302708a8756e 187 PIRSF PIRSF028513 2 185 9.8E-29 T 12-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 M634_15870 81a7c94ffdd5e2e9e202302708a8756e 187 Gene3D G3DSA:2.60.450.10 59 186 4.9E-38 T 12-10-2018 M634_08580 ebf74ffe855aa0fbd64d88c747660896 304 Pfam PF00701 Dihydrodipicolinate synthetase family 6 291 3.9E-62 T 12-10-2018 IPR002220 DapA-like GO:0016829 M634_08580 ebf74ffe855aa0fbd64d88c747660896 304 SUPERFAMILY SSF51569 3 291 3.77E-86 T 12-10-2018 M634_08580 ebf74ffe855aa0fbd64d88c747660896 304 Gene3D G3DSA:3.20.20.70 1 296 2.1E-87 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_08580 ebf74ffe855aa0fbd64d88c747660896 304 SMART SM01130 4 293 1.2E-97 T 12-10-2018 IPR002220 DapA-like GO:0016829 M634_08580 ebf74ffe855aa0fbd64d88c747660896 304 PIRSF PIRSF001365 1 301 2.9E-85 T 12-10-2018 IPR002220 DapA-like GO:0016829 M634_08580 ebf74ffe855aa0fbd64d88c747660896 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 1.8E-10 T 12-10-2018 IPR002220 DapA-like GO:0016829 M634_08580 ebf74ffe855aa0fbd64d88c747660896 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 1.8E-10 T 12-10-2018 IPR002220 DapA-like GO:0016829 M634_08580 ebf74ffe855aa0fbd64d88c747660896 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 132 149 1.8E-10 T 12-10-2018 IPR002220 DapA-like GO:0016829 M634_17335 ac62c4196ac157d6d79104737a38640f 228 Gene3D G3DSA:1.10.287.70 123 227 4.9E-21 T 12-10-2018 M634_17335 ac62c4196ac157d6d79104737a38640f 228 SUPERFAMILY SSF81324 126 220 1.57E-18 T 12-10-2018 M634_17335 ac62c4196ac157d6d79104737a38640f 228 Pfam PF07885 Ion channel 134 217 1.3E-17 T 12-10-2018 IPR013099 Potassium channel domain M634_19580 ead2c4041bf61ccee63dc0d3d6b3087d 96 Gene3D G3DSA:2.30.33.40 1 96 8.5E-33 T 12-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 M634_19580 ead2c4041bf61ccee63dc0d3d6b3087d 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 22.605 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 M634_19580 ead2c4041bf61ccee63dc0d3d6b3087d 96 PRINTS PR00297 10kDa chaperonin signature 82 95 1.1E-24 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 M634_19580 ead2c4041bf61ccee63dc0d3d6b3087d 96 PRINTS PR00297 10kDa chaperonin signature 60 72 1.1E-24 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 M634_19580 ead2c4041bf61ccee63dc0d3d6b3087d 96 PRINTS PR00297 10kDa chaperonin signature 3 18 1.1E-24 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 M634_19580 ead2c4041bf61ccee63dc0d3d6b3087d 96 PRINTS PR00297 10kDa chaperonin signature 25 46 1.1E-24 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 M634_19580 ead2c4041bf61ccee63dc0d3d6b3087d 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 1.8E-29 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 M634_19580 ead2c4041bf61ccee63dc0d3d6b3087d 96 SUPERFAMILY SSF50129 1 96 1.08E-27 T 12-10-2018 IPR011032 GroES-like superfamily M634_19580 ead2c4041bf61ccee63dc0d3d6b3087d 96 SMART SM00883 2 95 1.7E-40 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 M634_19580 ead2c4041bf61ccee63dc0d3d6b3087d 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 12-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 M634_16120 6f57327e46675879c9205ac0a01fbc7a 1226 Pfam PF02310 B12 binding domain 749 842 3.2E-17 T 12-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 M634_16120 6f57327e46675879c9205ac0a01fbc7a 1226 SUPERFAMILY SSF52242 744 895 1.07E-45 T 12-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 M634_16120 6f57327e46675879c9205ac0a01fbc7a 1226 SUPERFAMILY SSF47644 654 740 7.32E-29 T 12-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 M634_16120 6f57327e46675879c9205ac0a01fbc7a 1226 Gene3D G3DSA:3.20.20.330 2 339 4.1E-129 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 M634_16120 6f57327e46675879c9205ac0a01fbc7a 1226 SUPERFAMILY SSF56507 903 1225 7.85E-133 T 12-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 M634_16120 6f57327e46675879c9205ac0a01fbc7a 1226 Gene3D G3DSA:3.20.20.20 341 643 1.3E-130 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 M634_16120 6f57327e46675879c9205ac0a01fbc7a 1226 PIRSF PIRSF000381 3 1197 0.0 T 12-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 M634_16120 6f57327e46675879c9205ac0a01fbc7a 1226 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 940 1210 9.1E-123 T 12-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 M634_16120 6f57327e46675879c9205ac0a01fbc7a 1226 TIGRFAM TIGR02082 metH: methionine synthase 13 1194 0.0 T 12-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 M634_16120 6f57327e46675879c9205ac0a01fbc7a 1226 Pfam PF02574 Homocysteine S-methyltransferase 18 326 1.1E-81 T 12-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 M634_16120 6f57327e46675879c9205ac0a01fbc7a 1226 SUPERFAMILY SSF51717 357 631 4.19E-88 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 M634_16120 6f57327e46675879c9205ac0a01fbc7a 1226 Gene3D G3DSA:3.10.196.10 909 1224 5.0E-145 T 12-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 M634_16120 6f57327e46675879c9205ac0a01fbc7a 1226 Gene3D G3DSA:1.10.1240.10 650 738 6.3E-40 T 12-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 M634_16120 6f57327e46675879c9205ac0a01fbc7a 1226 Gene3D G3DSA:1.10.288.10 938 1094 5.0E-145 T 12-10-2018 M634_16120 6f57327e46675879c9205ac0a01fbc7a 1226 Gene3D G3DSA:3.40.50.280 745 896 8.0E-56 T 12-10-2018 M634_16120 6f57327e46675879c9205ac0a01fbc7a 1226 Pfam PF02607 B12 binding domain 660 734 2.9E-25 T 12-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 M634_16120 6f57327e46675879c9205ac0a01fbc7a 1226 SUPERFAMILY SSF82282 8 400 1.06E-119 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 M634_16120 6f57327e46675879c9205ac0a01fbc7a 1226 SMART SM01018 658 741 6.6E-45 T 12-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 M634_16120 6f57327e46675879c9205ac0a01fbc7a 1226 Pfam PF00809 Pterin binding enzyme 361 599 3.2E-59 T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 M634_06870 930b3775cda48639fb20637e07c180ad 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 1.0E-12 T 12-10-2018 M634_06870 930b3775cda48639fb20637e07c180ad 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 1.0E-12 T 12-10-2018 M634_06870 930b3775cda48639fb20637e07c180ad 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 167 185 1.0E-12 T 12-10-2018 M634_06870 930b3775cda48639fb20637e07c180ad 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.0E-12 T 12-10-2018 M634_06870 930b3775cda48639fb20637e07c180ad 429 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 333 1.0E-61 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 M634_06870 930b3775cda48639fb20637e07c180ad 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 4.2E-7 T 12-10-2018 M634_06870 930b3775cda48639fb20637e07c180ad 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 167 192 4.2E-7 T 12-10-2018 M634_06870 930b3775cda48639fb20637e07c180ad 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 4.2E-7 T 12-10-2018 M634_06870 930b3775cda48639fb20637e07c180ad 429 SUPERFAMILY SSF51905 3 347 4.58E-28 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_06870 930b3775cda48639fb20637e07c180ad 429 Gene3D G3DSA:3.50.50.100 1 409 9.8E-114 T 12-10-2018 M634_08155 3f9c81e013b0c88d744e78a4a6845003 319 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 1.9E-47 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 M634_08155 3f9c81e013b0c88d744e78a4a6845003 319 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 1.1E-124 T 12-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 M634_08155 3f9c81e013b0c88d744e78a4a6845003 319 Gene3D G3DSA:3.50.50.60 118 244 1.8E-128 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_08155 3f9c81e013b0c88d744e78a4a6845003 319 SUPERFAMILY SSF51905 2 313 5.44E-52 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_08155 3f9c81e013b0c88d744e78a4a6845003 319 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 12-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 M634_08155 3f9c81e013b0c88d744e78a4a6845003 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 5.8E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 M634_08155 3f9c81e013b0c88d744e78a4a6845003 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 5.8E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 M634_08155 3f9c81e013b0c88d744e78a4a6845003 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 5.8E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 M634_08155 3f9c81e013b0c88d744e78a4a6845003 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 5.8E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 M634_08155 3f9c81e013b0c88d744e78a4a6845003 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 5.8E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 M634_08155 3f9c81e013b0c88d744e78a4a6845003 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 5.8E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 M634_08155 3f9c81e013b0c88d744e78a4a6845003 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 5.8E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 M634_08155 3f9c81e013b0c88d744e78a4a6845003 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 5.8E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 M634_08155 3f9c81e013b0c88d744e78a4a6845003 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 5.8E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 M634_08155 3f9c81e013b0c88d744e78a4a6845003 319 Gene3D G3DSA:3.50.50.60 10 312 1.8E-128 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_08155 3f9c81e013b0c88d744e78a4a6845003 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.2E-38 T 12-10-2018 M634_08155 3f9c81e013b0c88d744e78a4a6845003 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 2.2E-38 T 12-10-2018 M634_08155 3f9c81e013b0c88d744e78a4a6845003 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 2.2E-38 T 12-10-2018 M634_08155 3f9c81e013b0c88d744e78a4a6845003 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 2.2E-38 T 12-10-2018 M634_08155 3f9c81e013b0c88d744e78a4a6845003 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 2.2E-38 T 12-10-2018 M634_24210 91ddbbd1c53f52cf6d1c1786168e560c 652 Gene3D G3DSA:3.40.50.720 420 579 2.7E-37 T 12-10-2018 M634_24210 91ddbbd1c53f52cf6d1c1786168e560c 652 Pfam PF02254 TrkA-N domain 422 535 1.0E-25 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 M634_24210 91ddbbd1c53f52cf6d1c1786168e560c 652 SUPERFAMILY SSF51735 420 560 3.69E-33 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_24210 91ddbbd1c53f52cf6d1c1786168e560c 652 Gene3D G3DSA:1.20.1530.20 2 399 2.6E-76 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily M634_24210 91ddbbd1c53f52cf6d1c1786168e560c 652 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 12 303 5.4E-73 T 12-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 M634_24210 91ddbbd1c53f52cf6d1c1786168e560c 652 Pfam PF00999 Sodium/hydrogen exchanger family 10 390 1.3E-57 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 M634_23915 226ccf8b6b8fb2e3cbee2d06880ad158 204 Pfam PF00462 Glutaredoxin 109 174 4.8E-16 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 M634_23915 226ccf8b6b8fb2e3cbee2d06880ad158 204 PRINTS PR00160 Glutaredoxin signature 157 170 1.1E-5 T 12-10-2018 IPR014025 Glutaredoxin subgroup M634_23915 226ccf8b6b8fb2e3cbee2d06880ad158 204 PRINTS PR00160 Glutaredoxin signature 171 184 1.1E-5 T 12-10-2018 IPR014025 Glutaredoxin subgroup M634_23915 226ccf8b6b8fb2e3cbee2d06880ad158 204 PRINTS PR00160 Glutaredoxin signature 108 126 1.1E-5 T 12-10-2018 IPR014025 Glutaredoxin subgroup M634_23915 226ccf8b6b8fb2e3cbee2d06880ad158 204 Gene3D G3DSA:3.40.30.10 109 185 2.1E-17 T 12-10-2018 M634_23915 226ccf8b6b8fb2e3cbee2d06880ad158 204 ProSitePatterns PS00195 Glutaredoxin active site. 110 126 - T 12-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 M634_23915 226ccf8b6b8fb2e3cbee2d06880ad158 204 SUPERFAMILY SSF52833 109 189 1.39E-16 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M634_15255 4c1ef1a5f3d556fe13605dd506a44766 439 Gene3D G3DSA:2.40.50.140 1 88 1.1E-28 T 12-10-2018 M634_15255 4c1ef1a5f3d556fe13605dd506a44766 439 Gene3D G3DSA:3.40.50.150 89 433 1.4E-118 T 12-10-2018 M634_15255 4c1ef1a5f3d556fe13605dd506a44766 439 Gene3D G3DSA:3.40.1350.30 135 271 1.4E-118 T 12-10-2018 M634_15255 4c1ef1a5f3d556fe13605dd506a44766 439 Pfam PF01938 TRAM domain 17 68 6.1E-8 T 12-10-2018 IPR002792 TRAM domain M634_15255 4c1ef1a5f3d556fe13605dd506a44766 439 SUPERFAMILY SSF50249 18 74 3.43E-13 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_15255 4c1ef1a5f3d556fe13605dd506a44766 439 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 370 400 - T 12-10-2018 IPR030390 RNA methyltransferase TrmA, active site M634_15255 4c1ef1a5f3d556fe13605dd506a44766 439 SUPERFAMILY SSF53335 77 438 4.76E-88 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_15255 4c1ef1a5f3d556fe13605dd506a44766 439 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 97 438 2.7E-35 T 12-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 M634_15255 4c1ef1a5f3d556fe13605dd506a44766 439 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 19 439 64.503 T 12-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 M634_15255 4c1ef1a5f3d556fe13605dd506a44766 439 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 25 431 6.6E-131 T 12-10-2018 M634_15255 4c1ef1a5f3d556fe13605dd506a44766 439 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 421 431 - T 12-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site M634_12200 c0f4450902d56b71371114fa2045fe5a 423 Gene3D G3DSA:1.20.1600.10 26 423 1.8E-78 T 12-10-2018 M634_12200 c0f4450902d56b71371114fa2045fe5a 423 Pfam PF02321 Outer membrane efflux protein 229 407 1.2E-26 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 M634_12200 c0f4450902d56b71371114fa2045fe5a 423 Pfam PF02321 Outer membrane efflux protein 28 204 2.0E-26 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 M634_12200 c0f4450902d56b71371114fa2045fe5a 423 SUPERFAMILY SSF56954 6 412 1.44E-77 T 12-10-2018 M634_00370 dda2b71b7f8372a8f92bc7c4143295fd 260 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 164 251 1.4E-29 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain M634_00370 dda2b71b7f8372a8f92bc7c4143295fd 260 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 37 157 5.6E-33 T 12-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 M634_00370 dda2b71b7f8372a8f92bc7c4143295fd 260 SUPERFAMILY SSF54534 46 253 2.95E-64 T 12-10-2018 M634_00370 dda2b71b7f8372a8f92bc7c4143295fd 260 Gene3D G3DSA:1.10.287.460 31 148 2.2E-32 T 12-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 M634_00370 dda2b71b7f8372a8f92bc7c4143295fd 260 Gene3D G3DSA:3.10.50.40 149 260 3.3E-43 T 12-10-2018 M634_13000 3492f5ea2cd4e819c166237485eb1dde 525 Pfam PF00245 Alkaline phosphatase 26 503 1.2E-82 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 M634_13000 3492f5ea2cd4e819c166237485eb1dde 525 Gene3D G3DSA:1.10.1200.140 388 445 2.3E-27 T 12-10-2018 M634_13000 3492f5ea2cd4e819c166237485eb1dde 525 Gene3D G3DSA:3.40.720.10 462 525 2.5E-7 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 M634_13000 3492f5ea2cd4e819c166237485eb1dde 525 Gene3D G3DSA:3.40.720.10 24 381 1.7E-139 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 M634_13000 3492f5ea2cd4e819c166237485eb1dde 525 ProSitePatterns PS00123 Alkaline phosphatase active site. 85 93 - T 12-10-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 M634_13000 3492f5ea2cd4e819c166237485eb1dde 525 SMART SM00098 27 437 9.2E-54 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 M634_13000 3492f5ea2cd4e819c166237485eb1dde 525 SUPERFAMILY SSF53649 9 505 1.85E-112 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 M634_13000 3492f5ea2cd4e819c166237485eb1dde 525 PRINTS PR00113 Alkaline phosphatase signature 122 142 1.1E-36 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 M634_13000 3492f5ea2cd4e819c166237485eb1dde 525 PRINTS PR00113 Alkaline phosphatase signature 26 46 1.1E-36 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 M634_13000 3492f5ea2cd4e819c166237485eb1dde 525 PRINTS PR00113 Alkaline phosphatase signature 267 296 1.1E-36 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 M634_13000 3492f5ea2cd4e819c166237485eb1dde 525 PRINTS PR00113 Alkaline phosphatase signature 166 176 1.1E-36 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 M634_13000 3492f5ea2cd4e819c166237485eb1dde 525 PRINTS PR00113 Alkaline phosphatase signature 85 100 1.1E-36 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 M634_06670 8d41eabd154d8f39aff423057ee307bb 329 SUPERFAMILY SSF51604 107 321 5.76E-47 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily M634_06670 8d41eabd154d8f39aff423057ee307bb 329 SUPERFAMILY SSF54826 1 100 1.77E-25 T 12-10-2018 M634_06670 8d41eabd154d8f39aff423057ee307bb 329 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 326 20.782 T 12-10-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 M634_06670 8d41eabd154d8f39aff423057ee307bb 329 Pfam PF13378 Enolase C-terminal domain-like 125 279 4.5E-13 T 12-10-2018 IPR029065 Enolase C-terminal domain-like M634_06670 8d41eabd154d8f39aff423057ee307bb 329 Gene3D G3DSA:3.20.20.120 99 300 5.7E-115 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily M634_06670 8d41eabd154d8f39aff423057ee307bb 329 Gene3D G3DSA:3.30.390.10 4 306 5.7E-115 T 12-10-2018 IPR029017 Enolase-like, N-terminal M634_06670 8d41eabd154d8f39aff423057ee307bb 329 SMART SM00922 116 213 7.4E-6 T 12-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal M634_06670 8d41eabd154d8f39aff423057ee307bb 329 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 311 1.2E-109 T 12-10-2018 M634_07195 9dacebbe0eb0bb3c1226797d977d38e8 501 Pfam PF14402 7 transmembrane helices usually fused to an inactive transglutaminase 255 498 5.6E-109 T 12-10-2018 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase M634_07195 9dacebbe0eb0bb3c1226797d977d38e8 501 Pfam PF14400 Inactive transglutaminase fused to 7 transmembrane helices 24 183 1.5E-58 T 12-10-2018 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices M634_08435 8003868892783af8946ca90840a299ec 265 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 19 258 3.9E-37 T 12-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 M634_08435 8003868892783af8946ca90840a299ec 265 Pfam PF02654 Cobalamin-5-phosphate synthase 22 256 9.8E-54 T 12-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 M634_08435 8003868892783af8946ca90840a299ec 265 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 265 47.812 T 12-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 M634_11220 9731d123d33f80954b7ab7676799fbd7 341 Gene3D G3DSA:1.10.443.10 118 331 7.5E-69 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 M634_11220 9731d123d33f80954b7ab7676799fbd7 341 Pfam PF00589 Phage integrase family 126 326 1.3E-43 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 M634_11220 9731d123d33f80954b7ab7676799fbd7 341 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 27 108 1.8E-23 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 M634_11220 9731d123d33f80954b7ab7676799fbd7 341 TIGRFAM TIGR02249 integrase_gron: integron integrase 26 341 1.4E-156 T 12-10-2018 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 M634_11220 9731d123d33f80954b7ab7676799fbd7 341 Gene3D G3DSA:1.10.150.130 22 115 4.0E-28 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal M634_11220 9731d123d33f80954b7ab7676799fbd7 341 SUPERFAMILY SSF56349 120 336 1.94E-47 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 M634_17035 a65a1ad3f9d5cfefb54c7d70c8d05479 243 SMART SM00448 10 121 3.7E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_17035 a65a1ad3f9d5cfefb54c7d70c8d05479 243 SMART SM00862 163 239 2.8E-21 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_17035 a65a1ad3f9d5cfefb54c7d70c8d05479 243 Pfam PF00486 Transcriptional regulatory protein, C terminal 164 239 2.1E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_17035 a65a1ad3f9d5cfefb54c7d70c8d05479 243 SUPERFAMILY SSF52172 11 134 5.41E-35 T 12-10-2018 IPR011006 CheY-like superfamily M634_17035 a65a1ad3f9d5cfefb54c7d70c8d05479 243 Gene3D G3DSA:3.40.50.2300 1 129 4.7E-35 T 12-10-2018 M634_17035 a65a1ad3f9d5cfefb54c7d70c8d05479 243 Pfam PF00072 Response regulator receiver domain 12 121 1.6E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_17035 a65a1ad3f9d5cfefb54c7d70c8d05479 243 Gene3D G3DSA:1.10.10.10 130 242 2.8E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_17035 a65a1ad3f9d5cfefb54c7d70c8d05479 243 SUPERFAMILY SSF46894 139 240 1.53E-27 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M634_18940 a4ea2cfac0f5487ac06b3eb3b081307c 306 PIRSF PIRSF036979 13 304 1.1E-97 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 M634_18940 a4ea2cfac0f5487ac06b3eb3b081307c 306 ProSitePatterns PS01053 Arginase family signature. 229 250 - T 12-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 M634_18940 a4ea2cfac0f5487ac06b3eb3b081307c 306 Gene3D G3DSA:3.40.800.10 1 305 2.0E-105 T 12-10-2018 M634_18940 a4ea2cfac0f5487ac06b3eb3b081307c 306 SUPERFAMILY SSF52768 12 303 1.13E-95 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily M634_18940 a4ea2cfac0f5487ac06b3eb3b081307c 306 TIGRFAM TIGR01230 agmatinase: agmatinase 25 299 1.0E-93 T 12-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 M634_18940 a4ea2cfac0f5487ac06b3eb3b081307c 306 Pfam PF00491 Arginase family 33 298 1.7E-90 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 M634_05560 64b5a714d0d24aa0c35845b8358230f4 299 Pfam PF00571 CBS domain 75 132 1.7E-8 T 12-10-2018 IPR000644 CBS domain M634_05560 64b5a714d0d24aa0c35845b8358230f4 299 Pfam PF00571 CBS domain 145 195 1.6E-6 T 12-10-2018 IPR000644 CBS domain M634_05560 64b5a714d0d24aa0c35845b8358230f4 299 SUPERFAMILY SSF56176 209 291 3.27E-23 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 M634_05560 64b5a714d0d24aa0c35845b8358230f4 299 Gene3D G3DSA:3.30.465.10 204 296 2.9E-31 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 M634_05560 64b5a714d0d24aa0c35845b8358230f4 299 SMART SM00116 84 133 0.0024 T 12-10-2018 IPR000644 CBS domain M634_05560 64b5a714d0d24aa0c35845b8358230f4 299 SMART SM00116 147 195 0.028 T 12-10-2018 IPR000644 CBS domain M634_05560 64b5a714d0d24aa0c35845b8358230f4 299 SUPERFAMILY SSF54631 65 206 9.1E-34 T 12-10-2018 M634_05560 64b5a714d0d24aa0c35845b8358230f4 299 SMART SM01091 211 289 2.4E-30 T 12-10-2018 IPR005170 Transporter-associated domain M634_05560 64b5a714d0d24aa0c35845b8358230f4 299 Gene3D G3DSA:3.10.580.10 57 203 1.8E-54 T 12-10-2018 M634_05560 64b5a714d0d24aa0c35845b8358230f4 299 Pfam PF03471 Transporter associated domain 212 287 3.3E-22 T 12-10-2018 IPR005170 Transporter-associated domain M634_06855 476e23932954f05f43da436b97f935fd 196 Pfam PF13036 Peptidoglycan-synthase activator LpoB 41 185 4.5E-55 T 12-10-2018 IPR014094 Penicillin-binding protein activator LpoB M634_06855 476e23932954f05f43da436b97f935fd 196 Gene3D G3DSA:3.40.50.10610 38 188 2.6E-43 T 12-10-2018 M634_06855 476e23932954f05f43da436b97f935fd 196 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 3 187 3.5E-74 T 12-10-2018 IPR014094 Penicillin-binding protein activator LpoB M634_15100 5cc15b01eb2edaac529fd4bd4440c620 595 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 551 568 - T 12-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 M634_15100 5cc15b01eb2edaac529fd4bd4440c620 595 SUPERFAMILY SSF51230 522 594 4.71E-20 T 12-10-2018 IPR011053 Single hybrid motif M634_15100 5cc15b01eb2edaac529fd4bd4440c620 595 Pfam PF00682 HMGL-like 6 270 2.5E-60 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 M634_15100 5cc15b01eb2edaac529fd4bd4440c620 595 Pfam PF02436 Conserved carboxylase domain 292 494 4.6E-58 T 12-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 M634_15100 5cc15b01eb2edaac529fd4bd4440c620 595 SUPERFAMILY SSF51569 1 300 1.08E-90 T 12-10-2018 M634_15100 5cc15b01eb2edaac529fd4bd4440c620 595 Gene3D G3DSA:2.40.50.100 522 595 6.7E-23 T 12-10-2018 M634_15100 5cc15b01eb2edaac529fd4bd4440c620 595 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 7 589 8.3E-267 T 12-10-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 M634_15100 5cc15b01eb2edaac529fd4bd4440c620 595 Gene3D G3DSA:3.20.20.70 1 464 2.4E-172 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_15100 5cc15b01eb2edaac529fd4bd4440c620 595 Pfam PF00364 Biotin-requiring enzyme 529 593 3.0E-16 T 12-10-2018 IPR000089 Biotin/lipoyl attachment M634_15100 5cc15b01eb2edaac529fd4bd4440c620 595 SUPERFAMILY SSF89000 297 462 1.26E-50 T 12-10-2018 M634_18735 ce062883689da24f9d5bdc9f7d14f2a6 252 SUPERFAMILY SSF52540 7 213 3.55E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_18735 ce062883689da24f9d5bdc9f7d14f2a6 252 SMART SM00382 34 214 2.7E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_18735 ce062883689da24f9d5bdc9f7d14f2a6 252 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_18735 ce062883689da24f9d5bdc9f7d14f2a6 252 Gene3D G3DSA:3.40.50.300 7 225 3.8E-56 T 12-10-2018 M634_18735 ce062883689da24f9d5bdc9f7d14f2a6 252 Pfam PF00005 ABC transporter 26 167 8.5E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_05175 752fbaa2c8f6bdab074ea40e3f31c1dc 198 PRINTS PR00773 GrpE protein signature 177 196 3.4E-29 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 M634_05175 752fbaa2c8f6bdab074ea40e3f31c1dc 198 PRINTS PR00773 GrpE protein signature 150 165 3.4E-29 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 M634_05175 752fbaa2c8f6bdab074ea40e3f31c1dc 198 PRINTS PR00773 GrpE protein signature 95 110 3.4E-29 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 M634_05175 752fbaa2c8f6bdab074ea40e3f31c1dc 198 PRINTS PR00773 GrpE protein signature 67 83 3.4E-29 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 M634_05175 752fbaa2c8f6bdab074ea40e3f31c1dc 198 ProSitePatterns PS01071 grpE protein signature. 153 196 - T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 M634_05175 752fbaa2c8f6bdab074ea40e3f31c1dc 198 SUPERFAMILY SSF51064 143 198 4.84E-20 T 12-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 M634_05175 752fbaa2c8f6bdab074ea40e3f31c1dc 198 Gene3D G3DSA:3.90.20.20 35 141 4.7E-33 T 12-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 M634_05175 752fbaa2c8f6bdab074ea40e3f31c1dc 198 Gene3D G3DSA:2.30.22.10 142 198 3.0E-26 T 12-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 M634_05175 752fbaa2c8f6bdab074ea40e3f31c1dc 198 Hamap MF_01151 Protein GrpE [grpE]. 2 198 22.876 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 M634_05175 752fbaa2c8f6bdab074ea40e3f31c1dc 198 SUPERFAMILY SSF58014 44 142 9.15E-30 T 12-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 M634_05175 752fbaa2c8f6bdab074ea40e3f31c1dc 198 Pfam PF01025 GrpE 40 198 3.3E-56 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 M634_00265 9d1dcc816438d816f7a4e717f23bb353 404 TIGRFAM TIGR00032 argG: argininosuccinate synthase 8 395 4.4E-135 T 12-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 M634_00265 9d1dcc816438d816f7a4e717f23bb353 404 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 12 20 - T 12-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 M634_00265 9d1dcc816438d816f7a4e717f23bb353 404 Pfam PF00764 Arginosuccinate synthase 10 396 2.8E-145 T 12-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 M634_00265 9d1dcc816438d816f7a4e717f23bb353 404 Gene3D G3DSA:3.90.1260.10 68 356 6.6E-145 T 12-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 M634_00265 9d1dcc816438d816f7a4e717f23bb353 404 SUPERFAMILY SSF69864 177 402 5.49E-88 T 12-10-2018 M634_00265 9d1dcc816438d816f7a4e717f23bb353 404 SUPERFAMILY SSF52402 7 170 3.75E-47 T 12-10-2018 M634_00265 9d1dcc816438d816f7a4e717f23bb353 404 Hamap MF_00005 Argininosuccinate synthase [argG]. 6 402 51.557 T 12-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 M634_00265 9d1dcc816438d816f7a4e717f23bb353 404 Gene3D G3DSA:3.40.50.620 9 177 6.6E-145 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M634_00265 9d1dcc816438d816f7a4e717f23bb353 404 Gene3D G3DSA:1.20.5.470 368 403 5.0E-8 T 12-10-2018 M634_00265 9d1dcc816438d816f7a4e717f23bb353 404 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 121 132 - T 12-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 M634_07075 8545f41d0e2eaf2001df400bab01a4bd 346 SUPERFAMILY SSF56601 3 339 1.54E-66 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like M634_07075 8545f41d0e2eaf2001df400bab01a4bd 346 Pfam PF00144 Beta-lactamase 48 323 1.5E-28 T 12-10-2018 IPR001466 Beta-lactamase-related M634_07075 8545f41d0e2eaf2001df400bab01a4bd 346 Gene3D G3DSA:3.40.710.10 18 341 7.9E-65 T 12-10-2018 M634_00235 ee506a0a64a34762298d50097c7af7fa 856 Pfam PF00905 Penicillin binding protein transpeptidase domain 438 610 6.4E-22 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 M634_00235 ee506a0a64a34762298d50097c7af7fa 856 Pfam PF00912 Transglycosylase 55 229 3.4E-63 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M634_00235 ee506a0a64a34762298d50097c7af7fa 856 SUPERFAMILY SSF56601 211 836 6.69E-113 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like M634_00235 ee506a0a64a34762298d50097c7af7fa 856 Pfam PF17092 Penicillin-binding protein OB-like domain 317 434 5.4E-33 T 12-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M634_00235 ee506a0a64a34762298d50097c7af7fa 856 Gene3D G3DSA:1.10.3810.10 48 242 8.1E-78 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M634_00235 ee506a0a64a34762298d50097c7af7fa 856 Gene3D G3DSA:3.40.710.10 243 334 1.4E-9 T 12-10-2018 M634_00235 ee506a0a64a34762298d50097c7af7fa 856 SUPERFAMILY SSF53955 43 256 9.0E-78 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily M634_00235 ee506a0a64a34762298d50097c7af7fa 856 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 786 3.8E-168 T 12-10-2018 M634_24145 9b496c0a8df15123ee0bcde818541050 355 Gene3D G3DSA:3.30.70.270 180 350 5.0E-55 T 12-10-2018 M634_24145 9b496c0a8df15123ee0bcde818541050 355 SUPERFAMILY SSF55781 28 171 1.33E-21 T 12-10-2018 M634_24145 9b496c0a8df15123ee0bcde818541050 355 Pfam PF01590 GAF domain 37 169 1.2E-10 T 12-10-2018 IPR003018 GAF domain GO:0005515 M634_24145 9b496c0a8df15123ee0bcde818541050 355 Gene3D G3DSA:3.30.450.40 27 179 1.2E-19 T 12-10-2018 IPR029016 GAF-like domain superfamily M634_24145 9b496c0a8df15123ee0bcde818541050 355 SMART SM00267 165 344 1.3E-48 T 12-10-2018 IPR000160 GGDEF domain M634_24145 9b496c0a8df15123ee0bcde818541050 355 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 179 344 1.4E-48 T 12-10-2018 IPR000160 GGDEF domain M634_24145 9b496c0a8df15123ee0bcde818541050 355 SMART SM00065 36 180 3.4E-9 T 12-10-2018 IPR003018 GAF domain GO:0005515 M634_24145 9b496c0a8df15123ee0bcde818541050 355 SUPERFAMILY SSF55073 188 343 7.3E-47 T 12-10-2018 IPR029787 Nucleotide cyclase M634_24145 9b496c0a8df15123ee0bcde818541050 355 Pfam PF00990 Diguanylate cyclase, GGDEF domain 183 340 8.3E-44 T 12-10-2018 IPR000160 GGDEF domain M634_12975 f25236f7baed113242d7871ff3bd4dd5 294 Pfam PF01263 Aldose 1-epimerase 27 291 2.9E-51 T 12-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 M634_12975 f25236f7baed113242d7871ff3bd4dd5 294 SUPERFAMILY SSF74650 9 288 1.95E-74 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 M634_12975 f25236f7baed113242d7871ff3bd4dd5 294 PIRSF PIRSF016020 3 294 4.9E-66 T 12-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 M634_12975 f25236f7baed113242d7871ff3bd4dd5 294 Gene3D G3DSA:2.70.98.10 2 293 5.4E-86 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 M634_18255 c4c660150810b757cd3d39d01bd48d83 360 Pfam PF01098 Cell cycle protein 14 355 1.8E-98 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M634_18255 c4c660150810b757cd3d39d01bd48d83 360 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 10 354 3.9E-116 T 12-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M634_18255 c4c660150810b757cd3d39d01bd48d83 360 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 4 359 25.943 T 12-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M634_13575 4cd606261b1683ac06bf568536749d55 699 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 12-10-2018 IPR025505 FHIPEP conserved site M634_13575 4cd606261b1683ac06bf568536749d55 699 PIRSF PIRSF005419 10 699 3.1E-253 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M634_13575 4cd606261b1683ac06bf568536749d55 699 Gene3D G3DSA:1.10.8.540 509 596 1.3E-23 T 12-10-2018 M634_13575 4cd606261b1683ac06bf568536749d55 699 Gene3D G3DSA:1.10.490.80 600 697 6.5E-15 T 12-10-2018 M634_13575 4cd606261b1683ac06bf568536749d55 699 Pfam PF00771 FHIPEP family 32 689 3.5E-270 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M634_13575 4cd606261b1683ac06bf568536749d55 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 3.7E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M634_13575 4cd606261b1683ac06bf568536749d55 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 3.7E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M634_13575 4cd606261b1683ac06bf568536749d55 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 3.7E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M634_13575 4cd606261b1683ac06bf568536749d55 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 3.7E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M634_13575 4cd606261b1683ac06bf568536749d55 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 3.7E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M634_13575 4cd606261b1683ac06bf568536749d55 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 3.7E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M634_13575 4cd606261b1683ac06bf568536749d55 699 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 696 7.7E-267 T 12-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 M634_13575 4cd606261b1683ac06bf568536749d55 699 Gene3D G3DSA:3.40.30.60 365 508 7.2E-54 T 12-10-2018 M634_23535 f2d1df4bc69b92c0a9f0590676e56522 317 Gene3D G3DSA:3.40.190.10 167 267 8.0E-28 T 12-10-2018 M634_23535 f2d1df4bc69b92c0a9f0590676e56522 317 Gene3D G3DSA:1.10.10.10 2 84 1.7E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_23535 f2d1df4bc69b92c0a9f0590676e56522 317 Gene3D G3DSA:3.40.190.10 86 294 8.0E-28 T 12-10-2018 M634_23535 f2d1df4bc69b92c0a9f0590676e56522 317 SUPERFAMILY SSF53850 86 296 8.14E-26 T 12-10-2018 M634_23535 f2d1df4bc69b92c0a9f0590676e56522 317 SUPERFAMILY SSF46785 2 82 9.52E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_23535 f2d1df4bc69b92c0a9f0590676e56522 317 Pfam PF03466 LysR substrate binding domain 94 250 1.1E-15 T 12-10-2018 IPR005119 LysR, substrate-binding M634_23535 f2d1df4bc69b92c0a9f0590676e56522 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 1.9E-12 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_10140 f73ac320079f617b36d6714ec39e0178 935 SUPERFAMILY SSF53067 223 456 8.87E-22 T 12-10-2018 M634_10140 f73ac320079f617b36d6714ec39e0178 935 SUPERFAMILY SSF53067 6 209 5.55E-30 T 12-10-2018 M634_10140 f73ac320079f617b36d6714ec39e0178 935 Pfam PF00012 Hsp70 protein 83 315 6.2E-17 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M634_10140 f73ac320079f617b36d6714ec39e0178 935 Pfam PF12531 DNA-K related protein 685 932 5.1E-101 T 12-10-2018 IPR021030 Protein of unknown function DUF3731 M634_10140 f73ac320079f617b36d6714ec39e0178 935 PRINTS PR00301 70kDa heat shock protein signature 165 185 2.9E-9 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M634_10140 f73ac320079f617b36d6714ec39e0178 935 PRINTS PR00301 70kDa heat shock protein signature 398 418 2.9E-9 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M634_10140 f73ac320079f617b36d6714ec39e0178 935 PRINTS PR00301 70kDa heat shock protein signature 232 242 2.9E-9 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M634_10140 f73ac320079f617b36d6714ec39e0178 935 PRINTS PR00301 70kDa heat shock protein signature 6 19 2.9E-9 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M634_07115 9226399360a3f1083f524f77c665b772 405 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 M634_07115 9226399360a3f1083f524f77c665b772 405 SUPERFAMILY SSF51161 292 403 3.68E-15 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily M634_07115 9226399360a3f1083f524f77c665b772 405 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 403 48.475 T 12-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 M634_07115 9226399360a3f1083f524f77c665b772 405 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 193 203 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 M634_07115 9226399360a3f1083f524f77c665b772 405 Pfam PF00483 Nucleotidyl transferase 6 273 2.8E-63 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 M634_07115 9226399360a3f1083f524f77c665b772 405 SUPERFAMILY SSF53448 4 358 2.58E-70 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M634_07115 9226399360a3f1083f524f77c665b772 405 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 4 377 3.0E-154 T 12-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 M634_07115 9226399360a3f1083f524f77c665b772 405 Gene3D G3DSA:3.90.550.10 2 286 2.2E-83 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M634_07115 9226399360a3f1083f524f77c665b772 405 Gene3D G3DSA:2.160.10.10 287 403 8.7E-33 T 12-10-2018 M634_07115 9226399360a3f1083f524f77c665b772 405 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 95 103 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 M634_21650 1ad20aaa4d9bb310e8c93bba9d3a3f9e 329 SUPERFAMILY SSF53850 131 327 2.71E-11 T 12-10-2018 M634_21650 1ad20aaa4d9bb310e8c93bba9d3a3f9e 329 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 41 97 2.1E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_21650 1ad20aaa4d9bb310e8c93bba9d3a3f9e 329 Gene3D G3DSA:3.40.190.10 122 316 3.6E-7 T 12-10-2018 M634_21650 1ad20aaa4d9bb310e8c93bba9d3a3f9e 329 Gene3D G3DSA:1.10.10.10 31 119 1.2E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_21650 1ad20aaa4d9bb310e8c93bba9d3a3f9e 329 Gene3D G3DSA:3.40.190.10 203 300 3.6E-7 T 12-10-2018 M634_21650 1ad20aaa4d9bb310e8c93bba9d3a3f9e 329 SUPERFAMILY SSF46785 38 115 8.25E-11 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_23015 ef080ee42218817857bf27d58c6df190 175 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 157 4.0E-15 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 M634_23015 ef080ee42218817857bf27d58c6df190 175 Gene3D G3DSA:3.40.50.1240 1 173 7.7E-20 T 12-10-2018 IPR029033 Histidine phosphatase superfamily M634_23015 ef080ee42218817857bf27d58c6df190 175 SUPERFAMILY SSF53254 1 160 3.0E-20 T 12-10-2018 IPR029033 Histidine phosphatase superfamily M634_08485 a479750a12b29f83d0e092b8464ee5e4 407 Gene3D G3DSA:1.20.1250.20 5 389 6.6E-46 T 12-10-2018 M634_08485 a479750a12b29f83d0e092b8464ee5e4 407 ProSitePatterns PS00216 Sugar transport proteins signature 1. 66 82 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 M634_08485 a479750a12b29f83d0e092b8464ee5e4 407 SUPERFAMILY SSF103473 9 387 5.75E-53 T 12-10-2018 IPR036259 MFS transporter superfamily M634_08485 a479750a12b29f83d0e092b8464ee5e4 407 Pfam PF07690 Major Facilitator Superfamily 16 352 1.5E-34 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M634_20380 b47eb7788932212236ecfa896a880a32 151 Gene3D G3DSA:3.30.70.920 58 148 2.1E-13 T 12-10-2018 M634_20380 b47eb7788932212236ecfa896a880a32 151 Gene3D G3DSA:1.10.10.10 1 52 2.3E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_20380 b47eb7788932212236ecfa896a880a32 151 SUPERFAMILY SSF54909 62 145 3.75E-14 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel M634_20380 b47eb7788932212236ecfa896a880a32 151 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 2.8E-16 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M634_20380 b47eb7788932212236ecfa896a880a32 151 SMART SM00344 1 110 1.4E-20 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 M634_20380 b47eb7788932212236ecfa896a880a32 151 SUPERFAMILY SSF46785 1 56 2.08E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_20380 b47eb7788932212236ecfa896a880a32 151 Pfam PF01037 Lrp/AsnC ligand binding domain 78 139 2.1E-12 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain M634_20380 b47eb7788932212236ecfa896a880a32 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 8.8E-12 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M634_20380 b47eb7788932212236ecfa896a880a32 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 8.8E-12 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M634_20380 b47eb7788932212236ecfa896a880a32 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 8.8E-12 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M634_16835 da4caca52f2730971fb222e74d7d3a69 316 PIRSF PIRSF037004 1 316 6.8E-139 T 12-10-2018 IPR017087 Uncharacterised conserved protein UCP037004 M634_16835 da4caca52f2730971fb222e74d7d3a69 316 Pfam PF04463 Protein of unknown function (DUF523) 7 148 6.6E-37 T 12-10-2018 IPR007553 Domain of unknown function DUF523 M634_16835 da4caca52f2730971fb222e74d7d3a69 316 Pfam PF08349 Protein of unknown function (DUF1722) 191 307 1.6E-44 T 12-10-2018 IPR013560 Domain of unknown function DUF1722 M634_04370 dc14537d5ecd6cbeb35ce69150f036ac 426 Gene3D G3DSA:3.40.50.1100 83 392 4.2E-138 T 12-10-2018 M634_04370 dc14537d5ecd6cbeb35ce69150f036ac 426 Gene3D G3DSA:3.40.50.1100 101 399 4.2E-138 T 12-10-2018 M634_04370 dc14537d5ecd6cbeb35ce69150f036ac 426 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 95 109 - T 12-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 M634_04370 dc14537d5ecd6cbeb35ce69150f036ac 426 TIGRFAM TIGR00260 thrC: threonine synthase 51 388 1.1E-114 T 12-10-2018 IPR004450 Threonine synthase-like M634_04370 dc14537d5ecd6cbeb35ce69150f036ac 426 Gene3D G3DSA:3.90.1380.10 1 79 1.3E-31 T 12-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily M634_04370 dc14537d5ecd6cbeb35ce69150f036ac 426 SUPERFAMILY SSF53686 1 424 3.14E-132 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme M634_04370 dc14537d5ecd6cbeb35ce69150f036ac 426 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 87 366 3.4E-23 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme M634_04370 dc14537d5ecd6cbeb35ce69150f036ac 426 Pfam PF14821 Threonine synthase N terminus 8 78 3.5E-8 T 12-10-2018 IPR029144 Threonine synthase, N-terminal M634_20465 5ab4884ce570004e5aa0dbdf5b8ee355 345 Pfam PF11168 Protein of unknown function (DUF2955) 15 154 3.3E-53 T 12-10-2018 IPR022604 Protein of unknown function DUF2955 M634_20465 5ab4884ce570004e5aa0dbdf5b8ee355 345 PIRSF PIRSF029594 8 345 1.9E-139 T 12-10-2018 IPR016926 Uncharacterised conserved protein UCP029594 M634_04080 9357865b85a1691d50a11fc7fa7df212 455 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 39 453 2.5E-164 T 12-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 M634_04080 9357865b85a1691d50a11fc7fa7df212 455 SMART SM00228 267 349 1.9E-17 T 12-10-2018 IPR001478 PDZ domain GO:0005515 M634_04080 9357865b85a1691d50a11fc7fa7df212 455 SMART SM00228 374 447 4.8E-9 T 12-10-2018 IPR001478 PDZ domain GO:0005515 M634_04080 9357865b85a1691d50a11fc7fa7df212 455 Gene3D G3DSA:2.30.42.10 265 361 2.3E-27 T 12-10-2018 M634_04080 9357865b85a1691d50a11fc7fa7df212 455 Gene3D G3DSA:2.40.10.120 37 261 5.5E-85 T 12-10-2018 M634_04080 9357865b85a1691d50a11fc7fa7df212 455 Pfam PF13180 PDZ domain 268 358 3.5E-17 T 12-10-2018 IPR001478 PDZ domain GO:0005515 M634_04080 9357865b85a1691d50a11fc7fa7df212 455 PRINTS PR00834 HtrA/DegQ protease family signature 221 238 1.1E-56 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 M634_04080 9357865b85a1691d50a11fc7fa7df212 455 PRINTS PR00834 HtrA/DegQ protease family signature 164 188 1.1E-56 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 M634_04080 9357865b85a1691d50a11fc7fa7df212 455 PRINTS PR00834 HtrA/DegQ protease family signature 199 216 1.1E-56 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 M634_04080 9357865b85a1691d50a11fc7fa7df212 455 PRINTS PR00834 HtrA/DegQ protease family signature 102 114 1.1E-56 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 M634_04080 9357865b85a1691d50a11fc7fa7df212 455 PRINTS PR00834 HtrA/DegQ protease family signature 123 143 1.1E-56 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 M634_04080 9357865b85a1691d50a11fc7fa7df212 455 PRINTS PR00834 HtrA/DegQ protease family signature 307 319 1.1E-56 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 M634_04080 9357865b85a1691d50a11fc7fa7df212 455 SUPERFAMILY SSF50156 379 454 1.58E-15 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 M634_04080 9357865b85a1691d50a11fc7fa7df212 455 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 377 443 4.7E-9 T 12-10-2018 IPR001478 PDZ domain GO:0005515 M634_04080 9357865b85a1691d50a11fc7fa7df212 455 Pfam PF13365 Trypsin-like peptidase domain 92 228 4.5E-32 T 12-10-2018 M634_04080 9357865b85a1691d50a11fc7fa7df212 455 SUPERFAMILY SSF50494 14 276 4.16E-64 T 12-10-2018 IPR009003 Peptidase S1, PA clan M634_04080 9357865b85a1691d50a11fc7fa7df212 455 Gene3D G3DSA:2.30.42.10 362 455 1.0E-28 T 12-10-2018 M634_04080 9357865b85a1691d50a11fc7fa7df212 455 SUPERFAMILY SSF50156 233 350 4.66E-25 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 M634_14455 9b20e72d96bd4be82d957c84824becab 154 Pfam PF07811 TadE-like protein 18 60 3.2E-10 T 12-10-2018 IPR012495 TadE-like M634_11980 2f7ac4df8b19b4c386c13dea0d7667a3 312 Pfam PF00849 RNA pseudouridylate synthase 68 200 5.0E-17 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 M634_11980 2f7ac4df8b19b4c386c13dea0d7667a3 312 Pfam PF01479 S4 domain 4 43 4.2E-11 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_11980 2f7ac4df8b19b4c386c13dea0d7667a3 312 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 72 232 7.2E-55 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 M634_11980 2f7ac4df8b19b4c386c13dea0d7667a3 312 Gene3D G3DSA:3.30.70.1560 130 220 3.6E-49 T 12-10-2018 M634_11980 2f7ac4df8b19b4c386c13dea0d7667a3 312 Gene3D G3DSA:3.10.290.10 1 59 2.3E-20 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 M634_11980 2f7ac4df8b19b4c386c13dea0d7667a3 312 SMART SM00363 3 61 3.2E-9 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_11980 2f7ac4df8b19b4c386c13dea0d7667a3 312 Gene3D G3DSA:3.30.70.580 70 228 3.6E-49 T 12-10-2018 M634_11980 2f7ac4df8b19b4c386c13dea0d7667a3 312 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 106 120 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 M634_11980 2f7ac4df8b19b4c386c13dea0d7667a3 312 SUPERFAMILY SSF55120 68 237 1.3E-42 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 M634_11980 2f7ac4df8b19b4c386c13dea0d7667a3 312 SUPERFAMILY SSF55174 4 96 5.72E-12 T 12-10-2018 M634_20190 84050130a9cad80d27e9fd858cc81232 430 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 67 72 - T 12-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 M634_20190 84050130a9cad80d27e9fd858cc81232 430 SMART SM00020 27 331 1.1E-21 T 12-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 M634_20190 84050130a9cad80d27e9fd858cc81232 430 Gene3D G3DSA:2.40.10.10 56 340 1.6E-42 T 12-10-2018 M634_20190 84050130a9cad80d27e9fd858cc81232 430 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 150 164 1.2E-12 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 M634_20190 84050130a9cad80d27e9fd858cc81232 430 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 277 289 1.2E-12 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 M634_20190 84050130a9cad80d27e9fd858cc81232 430 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 57 72 1.2E-12 T 12-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 M634_20190 84050130a9cad80d27e9fd858cc81232 430 Pfam PF00089 Trypsin 40 331 3.0E-26 T 12-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 M634_20190 84050130a9cad80d27e9fd858cc81232 430 SUPERFAMILY SSF50494 26 336 1.02E-41 T 12-10-2018 IPR009003 Peptidase S1, PA clan M634_14005 fd1ea0667c2c6cd2a5fa6c8daea44f2f 255 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 63 77 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 M634_14005 fd1ea0667c2c6cd2a5fa6c8daea44f2f 255 Gene3D G3DSA:3.30.2350.10 6 237 4.7E-61 T 12-10-2018 M634_14005 fd1ea0667c2c6cd2a5fa6c8daea44f2f 255 Pfam PF00849 RNA pseudouridylate synthase 24 183 1.4E-32 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 M634_14005 fd1ea0667c2c6cd2a5fa6c8daea44f2f 255 SUPERFAMILY SSF55120 9 252 2.72E-64 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 M634_11240 ce87ffb2325c447d4f88944fd4c250aa 514 SMART SM00382 225 368 1.0E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_11240 ce87ffb2325c447d4f88944fd4c250aa 514 Gene3D G3DSA:3.40.50.300 198 375 1.1E-56 T 12-10-2018 M634_11240 ce87ffb2325c447d4f88944fd4c250aa 514 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 417 426 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site M634_11240 ce87ffb2325c447d4f88944fd4c250aa 514 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 290 305 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M634_11240 ce87ffb2325c447d4f88944fd4c250aa 514 SUPERFAMILY SSF55785 81 171 7.8E-10 T 12-10-2018 IPR035965 PAS domain superfamily M634_11240 ce87ffb2325c447d4f88944fd4c250aa 514 Gene3D G3DSA:1.10.10.60 459 513 3.0E-25 T 12-10-2018 M634_11240 ce87ffb2325c447d4f88944fd4c250aa 514 Gene3D G3DSA:3.30.450.20 82 187 7.5E-19 T 12-10-2018 M634_11240 ce87ffb2325c447d4f88944fd4c250aa 514 Pfam PF00989 PAS fold 83 130 4.5E-6 T 12-10-2018 IPR013767 PAS fold GO:0006355 M634_11240 ce87ffb2325c447d4f88944fd4c250aa 514 Pfam PF00158 Sigma-54 interaction domain 206 370 4.5E-57 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 M634_11240 ce87ffb2325c447d4f88944fd4c250aa 514 SUPERFAMILY SSF55021 1 68 1.02E-6 T 12-10-2018 M634_11240 ce87ffb2325c447d4f88944fd4c250aa 514 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 229 242 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M634_11240 ce87ffb2325c447d4f88944fd4c250aa 514 SUPERFAMILY SSF46689 461 512 1.02E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_11240 ce87ffb2325c447d4f88944fd4c250aa 514 Gene3D G3DSA:3.30.70.260 1 80 1.3E-25 T 12-10-2018 M634_11240 ce87ffb2325c447d4f88944fd4c250aa 514 SUPERFAMILY SSF52540 205 445 7.82E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_11240 ce87ffb2325c447d4f88944fd4c250aa 514 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 465 513 3.0E-28 T 12-10-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 M634_11240 ce87ffb2325c447d4f88944fd4c250aa 514 Gene3D G3DSA:1.10.8.60 377 451 2.4E-15 T 12-10-2018 M634_11240 ce87ffb2325c447d4f88944fd4c250aa 514 SMART SM00091 80 146 7.8E-7 T 12-10-2018 IPR000014 PAS domain M634_08990 6ecf97dc68228c002ace00876720d95a 138 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 32 129 9.9E-14 T 12-10-2018 IPR039366 YscW/ExsB M634_08990 6ecf97dc68228c002ace00876720d95a 138 TIGRFAM TIGR02567 YscW: type III secretion system chaperone YscW 8 138 2.3E-53 T 12-10-2018 IPR013400 Type III secretion system chaperone, YscW M634_15735 f00c3ded10dff4d0fa0edb216032525c 221 Pfam PF00106 short chain dehydrogenase 2 182 8.5E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_15735 f00c3ded10dff4d0fa0edb216032525c 221 Gene3D G3DSA:3.40.50.720 1 221 1.0E-52 T 12-10-2018 M634_15735 f00c3ded10dff4d0fa0edb216032525c 221 SUPERFAMILY SSF51735 2 201 5.15E-38 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_15735 f00c3ded10dff4d0fa0edb216032525c 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 1 17 3.4E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_15735 f00c3ded10dff4d0fa0edb216032525c 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 179 3.4E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_15735 f00c3ded10dff4d0fa0edb216032525c 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 160 3.4E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_03175 3710aadd39738f47a96578c2deabbb37 648 SUPERFAMILY SSF51735 144 268 7.09E-17 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_03175 3710aadd39738f47a96578c2deabbb37 648 Pfam PF02719 Polysaccharide biosynthesis protein 283 580 6.3E-128 T 12-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain M634_03175 3710aadd39738f47a96578c2deabbb37 648 SUPERFAMILY SSF51735 281 542 3.33E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_03175 3710aadd39738f47a96578c2deabbb37 648 Gene3D G3DSA:3.40.50.720 140 264 8.7E-31 T 12-10-2018 M634_03175 3710aadd39738f47a96578c2deabbb37 648 Pfam PF13727 CoA-binding domain 68 238 3.2E-10 T 12-10-2018 M634_03175 3710aadd39738f47a96578c2deabbb37 648 Gene3D G3DSA:3.40.50.720 278 614 2.8E-113 T 12-10-2018 M634_20160 7845c96dbc7b58e66c0fafbd72cb3e86 177 Pfam PF01872 RibD C-terminal domain 4 164 3.0E-18 T 12-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 M634_20160 7845c96dbc7b58e66c0fafbd72cb3e86 177 Gene3D G3DSA:3.40.430.10 2 175 1.5E-50 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 M634_20160 7845c96dbc7b58e66c0fafbd72cb3e86 177 SUPERFAMILY SSF53597 4 175 8.12E-32 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 M634_19765 278618449301f3ba76e922e25cd795b1 166 Gene3D G3DSA:3.30.420.130 3 108 5.3E-15 T 12-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily M634_19765 278618449301f3ba76e922e25cd795b1 166 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 8 98 9.4E-16 T 12-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis M634_19765 278618449301f3ba76e922e25cd795b1 166 SUPERFAMILY SSF53146 1 117 6.67E-21 T 12-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily M634_16260 287bbe5870f051ab43242988e11e7ad9 162 SUPERFAMILY SSF48452 36 139 7.83E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_16260 287bbe5870f051ab43242988e11e7ad9 162 Gene3D G3DSA:1.25.40.10 29 158 6.9E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_02605 b097d272efc3934bae82ae4aace570f5 469 SUPERFAMILY SSF55931 102 468 3.92E-137 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 M634_02605 b097d272efc3934bae82ae4aace570f5 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 6.3E-139 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 M634_02605 b097d272efc3934bae82ae4aace570f5 469 Gene3D G3DSA:3.30.590.10 105 457 7.2E-149 T 12-10-2018 M634_02605 b097d272efc3934bae82ae4aace570f5 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 12-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 M634_02605 b097d272efc3934bae82ae4aace570f5 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 3.5E-212 T 12-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 M634_02605 b097d272efc3934bae82ae4aace570f5 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 9.0E-31 T 12-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 M634_02605 b097d272efc3934bae82ae4aace570f5 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 12-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 M634_02605 b097d272efc3934bae82ae4aace570f5 469 SMART SM01230 102 379 1.9E-152 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 M634_02605 b097d272efc3934bae82ae4aace570f5 469 Gene3D G3DSA:3.10.20.70 2 104 1.7E-40 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 M634_02605 b097d272efc3934bae82ae4aace570f5 469 SUPERFAMILY SSF54368 3 100 5.89E-36 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 M634_02605 b097d272efc3934bae82ae4aace570f5 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 12-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 M634_22280 7e4973c10050c770badd7c10366f8dcd 144 Gene3D G3DSA:3.10.129.10 1 143 4.4E-57 T 12-10-2018 M634_22280 7e4973c10050c770badd7c10366f8dcd 144 SUPERFAMILY SSF54637 1 137 1.84E-30 T 12-10-2018 IPR029069 HotDog domain superfamily M634_22280 7e4973c10050c770badd7c10366f8dcd 144 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 20 135 4.0E-39 T 12-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 M634_22280 7e4973c10050c770badd7c10366f8dcd 144 Pfam PF03061 Thioesterase superfamily 52 128 9.2E-15 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 M634_04075 04ae05ff14e3b85d23d2f460fc023209 354 Pfam PF13365 Trypsin-like peptidase domain 82 215 7.4E-33 T 12-10-2018 M634_04075 04ae05ff14e3b85d23d2f460fc023209 354 SUPERFAMILY SSF50156 239 346 6.05E-20 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 M634_04075 04ae05ff14e3b85d23d2f460fc023209 354 Gene3D G3DSA:2.40.10.10 31 142 2.7E-33 T 12-10-2018 M634_04075 04ae05ff14e3b85d23d2f460fc023209 354 Gene3D G3DSA:2.30.42.10 256 354 1.8E-23 T 12-10-2018 M634_04075 04ae05ff14e3b85d23d2f460fc023209 354 Gene3D G3DSA:2.40.10.10 143 255 1.4E-35 T 12-10-2018 M634_04075 04ae05ff14e3b85d23d2f460fc023209 354 SUPERFAMILY SSF50494 43 265 5.06E-62 T 12-10-2018 IPR009003 Peptidase S1, PA clan M634_04075 04ae05ff14e3b85d23d2f460fc023209 354 SMART SM00228 256 338 4.9E-6 T 12-10-2018 IPR001478 PDZ domain GO:0005515 M634_04075 04ae05ff14e3b85d23d2f460fc023209 354 PRINTS PR00834 HtrA/DegQ protease family signature 186 203 1.2E-46 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 M634_04075 04ae05ff14e3b85d23d2f460fc023209 354 PRINTS PR00834 HtrA/DegQ protease family signature 91 103 1.2E-46 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 M634_04075 04ae05ff14e3b85d23d2f460fc023209 354 PRINTS PR00834 HtrA/DegQ protease family signature 296 308 1.2E-46 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 M634_04075 04ae05ff14e3b85d23d2f460fc023209 354 PRINTS PR00834 HtrA/DegQ protease family signature 112 132 1.2E-46 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 M634_04075 04ae05ff14e3b85d23d2f460fc023209 354 PRINTS PR00834 HtrA/DegQ protease family signature 152 176 1.2E-46 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 M634_04075 04ae05ff14e3b85d23d2f460fc023209 354 PRINTS PR00834 HtrA/DegQ protease family signature 208 225 1.2E-46 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 M634_04075 04ae05ff14e3b85d23d2f460fc023209 354 Pfam PF13180 PDZ domain 257 346 4.1E-14 T 12-10-2018 IPR001478 PDZ domain GO:0005515 M634_04075 04ae05ff14e3b85d23d2f460fc023209 354 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 2 350 1.2E-166 T 12-10-2018 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 M634_01630 d62e5bccaaa2103d868def9fd2926c6b 397 Gene3D G3DSA:1.20.1720.10 12 385 9.6E-89 T 12-10-2018 M634_01630 d62e5bccaaa2103d868def9fd2926c6b 397 SUPERFAMILY SSF103473 9 383 6.15E-58 T 12-10-2018 IPR036259 MFS transporter superfamily M634_01630 d62e5bccaaa2103d868def9fd2926c6b 397 Pfam PF07690 Major Facilitator Superfamily 16 352 1.4E-46 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M634_01630 d62e5bccaaa2103d868def9fd2926c6b 397 ProSitePatterns PS00216 Sugar transport proteins signature 1. 65 81 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 M634_01630 d62e5bccaaa2103d868def9fd2926c6b 397 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 9 381 3.5E-70 T 12-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 M634_14650 b56faf693d6bb4214387811b73ef11eb 131 Gene3D G3DSA:3.30.300.20 1 106 2.2E-35 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta M634_14650 b56faf693d6bb4214387811b73ef11eb 131 Pfam PF02033 Ribosome-binding factor A 7 110 1.4E-30 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 M634_14650 b56faf693d6bb4214387811b73ef11eb 131 SUPERFAMILY SSF89919 2 105 4.32E-32 T 12-10-2018 IPR023799 Ribosome-binding factor A domain superfamily M634_14650 b56faf693d6bb4214387811b73ef11eb 131 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 98 2.0E-47 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 M634_14650 b56faf693d6bb4214387811b73ef11eb 131 ProSitePatterns PS01319 Ribosome-binding factor A signature. 77 98 - T 12-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 M634_14650 b56faf693d6bb4214387811b73ef11eb 131 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 111 26.662 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 M634_14650 b56faf693d6bb4214387811b73ef11eb 131 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 116 1.8E-35 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 M634_12790 91439a524c1a0fd25473ea5185fafcb1 319 SUPERFAMILY SSF56672 46 239 1.02E-10 T 12-10-2018 M634_12790 91439a524c1a0fd25473ea5185fafcb1 319 Gene3D G3DSA:3.30.70.270 96 239 1.5E-5 T 12-10-2018 M634_12790 91439a524c1a0fd25473ea5185fafcb1 319 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 171 184 1.0E-41 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M634_12790 91439a524c1a0fd25473ea5185fafcb1 319 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 45 58 1.0E-41 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M634_12790 91439a524c1a0fd25473ea5185fafcb1 319 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 153 166 1.0E-41 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M634_12790 91439a524c1a0fd25473ea5185fafcb1 319 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 186 197 1.0E-41 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M634_12790 91439a524c1a0fd25473ea5185fafcb1 319 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 90 104 1.0E-41 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M634_12790 91439a524c1a0fd25473ea5185fafcb1 319 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 59 71 1.0E-41 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M634_12790 91439a524c1a0fd25473ea5185fafcb1 319 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 238 244 1.0E-41 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M634_12790 91439a524c1a0fd25473ea5185fafcb1 319 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 106 124 1.0E-41 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M634_12790 91439a524c1a0fd25473ea5185fafcb1 319 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 125 135 1.0E-41 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M634_12790 91439a524c1a0fd25473ea5185fafcb1 319 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 51 241 5.8E-29 T 12-10-2018 IPR000477 Reverse transcriptase domain M634_02820 549d610e98db212e49b3a8bb7916f282 407 SMART SM00028 360 392 350.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_02820 549d610e98db212e49b3a8bb7916f282 407 SMART SM00028 151 184 0.33 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_02820 549d610e98db212e49b3a8bb7916f282 407 SMART SM00028 74 107 15.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_02820 549d610e98db212e49b3a8bb7916f282 407 Gene3D G3DSA:1.25.40.10 145 291 6.6E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_02820 549d610e98db212e49b3a8bb7916f282 407 SUPERFAMILY SSF48452 289 387 1.28E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_02820 549d610e98db212e49b3a8bb7916f282 407 Gene3D G3DSA:1.25.40.10 25 144 1.7E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_02820 549d610e98db212e49b3a8bb7916f282 407 SUPERFAMILY SSF48452 74 249 3.79E-15 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_02820 549d610e98db212e49b3a8bb7916f282 407 Pfam PF13181 Tetratricopeptide repeat 151 182 0.0062 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_02820 549d610e98db212e49b3a8bb7916f282 407 Gene3D G3DSA:1.25.40.10 292 394 7.4E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_09985 9dfb58be66aa34b219befe6a62c3488b 514 SUPERFAMILY SSF52172 3 186 1.18E-36 T 12-10-2018 IPR011006 CheY-like superfamily M634_09985 9dfb58be66aa34b219befe6a62c3488b 514 SMART SM00448 3 114 9.0E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_09985 9dfb58be66aa34b219befe6a62c3488b 514 SUPERFAMILY SSF46689 457 505 4.44E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_09985 9dfb58be66aa34b219befe6a62c3488b 514 Gene3D G3DSA:3.40.50.2300 1 133 3.7E-30 T 12-10-2018 M634_09985 9dfb58be66aa34b219befe6a62c3488b 514 Gene3D G3DSA:3.40.50.300 134 313 6.7E-64 T 12-10-2018 M634_09985 9dfb58be66aa34b219befe6a62c3488b 514 Pfam PF02954 Bacterial regulatory protein, Fis family 464 500 2.9E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M634_09985 9dfb58be66aa34b219befe6a62c3488b 514 SMART SM00382 162 304 3.4E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_09985 9dfb58be66aa34b219befe6a62c3488b 514 Gene3D G3DSA:1.10.10.60 458 501 4.9E-8 T 12-10-2018 M634_09985 9dfb58be66aa34b219befe6a62c3488b 514 Gene3D G3DSA:1.10.8.60 314 395 2.2E-25 T 12-10-2018 M634_09985 9dfb58be66aa34b219befe6a62c3488b 514 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M634_09985 9dfb58be66aa34b219befe6a62c3488b 514 SUPERFAMILY SSF52540 142 385 5.32E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_09985 9dfb58be66aa34b219befe6a62c3488b 514 Pfam PF00158 Sigma-54 interaction domain 143 308 2.5E-68 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 M634_09985 9dfb58be66aa34b219befe6a62c3488b 514 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site M634_09985 9dfb58be66aa34b219befe6a62c3488b 514 Pfam PF00072 Response regulator receiver domain 5 114 3.3E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_01575 de700416853b94dce5e75141f2083571 280 Gene3D G3DSA:1.10.10.60 234 280 2.5E-11 T 12-10-2018 M634_01575 de700416853b94dce5e75141f2083571 280 Pfam PF12833 Helix-turn-helix domain 207 278 1.5E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_01575 de700416853b94dce5e75141f2083571 280 SUPERFAMILY SSF51215 36 148 3.92E-17 T 12-10-2018 IPR037923 Transcription regulator HTH-like M634_01575 de700416853b94dce5e75141f2083571 280 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 263 279 1.9E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M634_01575 de700416853b94dce5e75141f2083571 280 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 248 263 1.9E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M634_01575 de700416853b94dce5e75141f2083571 280 Gene3D G3DSA:1.10.10.60 181 233 1.4E-12 T 12-10-2018 M634_01575 de700416853b94dce5e75141f2083571 280 SUPERFAMILY SSF46689 182 230 1.08E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_01575 de700416853b94dce5e75141f2083571 280 Pfam PF02311 AraC-like ligand binding domain 30 148 8.5E-20 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 M634_01575 de700416853b94dce5e75141f2083571 280 SUPERFAMILY SSF46689 233 278 1.43E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_01575 de700416853b94dce5e75141f2083571 280 SMART SM00342 197 279 2.0E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_08885 9a297afa79b9672e116c3c7c12c48a9c 474 Gene3D G3DSA:3.30.2130.10 311 463 4.8E-9 T 12-10-2018 M634_08885 9a297afa79b9672e116c3c7c12c48a9c 474 Pfam PF00696 Amino acid kinase family 4 293 2.1E-23 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 M634_08885 9a297afa79b9672e116c3c7c12c48a9c 474 SUPERFAMILY SSF55021 398 462 1.76E-8 T 12-10-2018 M634_08885 9a297afa79b9672e116c3c7c12c48a9c 474 Gene3D G3DSA:3.40.1160.10 3 306 4.1E-58 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily M634_08885 9a297afa79b9672e116c3c7c12c48a9c 474 SUPERFAMILY SSF53633 5 306 1.45E-55 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily M634_07950 7a70ed583d9de11385669492c25a6a03 171 Pfam PF00583 Acetyltransferase (GNAT) family 43 143 9.5E-16 T 12-10-2018 IPR000182 GNAT domain M634_07950 7a70ed583d9de11385669492c25a6a03 171 SUPERFAMILY SSF55729 1 152 3.09E-27 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_07950 7a70ed583d9de11385669492c25a6a03 171 Gene3D G3DSA:3.40.630.30 4 167 1.3E-34 T 12-10-2018 M634_08805 16b03ad9b13f3f39d50c0c5336189140 476 Pfam PF00512 His Kinase A (phospho-acceptor) domain 262 324 1.5E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_08805 16b03ad9b13f3f39d50c0c5336189140 476 Pfam PF08521 Two-component sensor kinase N-terminal 29 183 5.2E-8 T 12-10-2018 IPR013727 Two-component sensor kinase, N-terminal M634_08805 16b03ad9b13f3f39d50c0c5336189140 476 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 368 474 5.4E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_08805 16b03ad9b13f3f39d50c0c5336189140 476 Gene3D G3DSA:1.10.287.130 211 325 6.7E-20 T 12-10-2018 M634_08805 16b03ad9b13f3f39d50c0c5336189140 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 433 1.3E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_08805 16b03ad9b13f3f39d50c0c5336189140 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 455 1.3E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_08805 16b03ad9b13f3f39d50c0c5336189140 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 419 1.3E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_08805 16b03ad9b13f3f39d50c0c5336189140 476 SUPERFAMILY SSF55874 315 475 4.85E-32 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_08805 16b03ad9b13f3f39d50c0c5336189140 476 SMART SM00387 368 476 1.3E-24 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_08805 16b03ad9b13f3f39d50c0c5336189140 476 SMART SM00388 260 325 5.0E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_08805 16b03ad9b13f3f39d50c0c5336189140 476 SUPERFAMILY SSF47384 243 324 1.96E-17 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M634_08805 16b03ad9b13f3f39d50c0c5336189140 476 Gene3D G3DSA:3.30.565.10 329 475 1.1E-32 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_19845 5a8e4fe62651dd77a8544298331064e3 411 Gene3D G3DSA:1.10.287.470 132 206 6.7E-50 T 12-10-2018 M634_19845 5a8e4fe62651dd77a8544298331064e3 411 Pfam PF13437 HlyD family secretion protein 210 319 3.5E-10 T 12-10-2018 M634_19845 5a8e4fe62651dd77a8544298331064e3 411 Gene3D G3DSA:2.40.420.20 333 397 6.7E-50 T 12-10-2018 M634_19845 5a8e4fe62651dd77a8544298331064e3 411 Pfam PF13533 Biotin-lipoyl like 98 146 1.1E-6 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain M634_19845 5a8e4fe62651dd77a8544298331064e3 411 SUPERFAMILY SSF111369 87 264 1.57E-21 T 12-10-2018 M634_19845 5a8e4fe62651dd77a8544298331064e3 411 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 86 398 4.0E-38 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 M634_19845 5a8e4fe62651dd77a8544298331064e3 411 Gene3D G3DSA:2.40.50.100 95 240 6.7E-50 T 12-10-2018 M634_19845 5a8e4fe62651dd77a8544298331064e3 411 Gene3D G3DSA:2.40.30.170 86 332 6.7E-50 T 12-10-2018 M634_09065 b6421172d78c3aacfac2dfd3bfa57a68 149 Pfam PF05932 Tir chaperone protein (CesT) family 9 125 1.8E-5 T 12-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 M634_09065 b6421172d78c3aacfac2dfd3bfa57a68 149 Gene3D G3DSA:3.30.1460.10 2 131 3.6E-16 T 12-10-2018 M634_09065 b6421172d78c3aacfac2dfd3bfa57a68 149 SUPERFAMILY SSF69635 5 131 2.56E-11 T 12-10-2018 M634_09300 1b2f065b9682b1bfa94e0f32e3a2f27d 3852 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 3727 3745 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site M634_09300 1b2f065b9682b1bfa94e0f32e3a2f27d 3852 Gene3D G3DSA:2.60.40.10 500 590 1.4E-5 T 12-10-2018 IPR013783 Immunoglobulin-like fold M634_09300 1b2f065b9682b1bfa94e0f32e3a2f27d 3852 Gene3D G3DSA:2.60.40.10 1915 2005 3.3E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold M634_09300 1b2f065b9682b1bfa94e0f32e3a2f27d 3852 Gene3D G3DSA:2.60.40.10 2294 2384 1.2E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold M634_09300 1b2f065b9682b1bfa94e0f32e3a2f27d 3852 Gene3D G3DSA:2.60.40.10 1533 1626 5.1E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold M634_09300 1b2f065b9682b1bfa94e0f32e3a2f27d 3852 Gene3D G3DSA:2.60.40.10 879 969 5.7E-7 T 12-10-2018 IPR013783 Immunoglobulin-like fold M634_09300 1b2f065b9682b1bfa94e0f32e3a2f27d 3852 Gene3D G3DSA:2.60.40.10 1258 1348 6.8E-7 T 12-10-2018 IPR013783 Immunoglobulin-like fold M634_09300 1b2f065b9682b1bfa94e0f32e3a2f27d 3852 SMART SM00736 2298 2390 0.062 T 12-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 M634_09300 1b2f065b9682b1bfa94e0f32e3a2f27d 3852 SMART SM00736 1262 1354 0.052 T 12-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 M634_09300 1b2f065b9682b1bfa94e0f32e3a2f27d 3852 SMART SM00736 504 596 0.083 T 12-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 M634_09300 1b2f065b9682b1bfa94e0f32e3a2f27d 3852 SMART SM00736 883 975 0.018 T 12-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 M634_09300 1b2f065b9682b1bfa94e0f32e3a2f27d 3852 SMART SM00736 1919 2011 0.067 T 12-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 M634_09300 1b2f065b9682b1bfa94e0f32e3a2f27d 3852 SMART SM00736 1537 1632 0.23 T 12-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 M634_09300 1b2f065b9682b1bfa94e0f32e3a2f27d 3852 Gene3D G3DSA:2.150.10.10 3696 3844 7.4E-21 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal M634_09300 1b2f065b9682b1bfa94e0f32e3a2f27d 3852 SMART SM00327 3365 3538 1.0E-5 T 12-10-2018 IPR002035 von Willebrand factor, type A M634_09300 1b2f065b9682b1bfa94e0f32e3a2f27d 3852 PRINTS PR00313 NodO calcium binding signature 3740 3749 1.4E-6 T 12-10-2018 M634_09300 1b2f065b9682b1bfa94e0f32e3a2f27d 3852 PRINTS PR00313 NodO calcium binding signature 3701 3712 1.4E-6 T 12-10-2018 M634_09300 1b2f065b9682b1bfa94e0f32e3a2f27d 3852 PRINTS PR00313 NodO calcium binding signature 3722 3730 1.4E-6 T 12-10-2018 M634_09300 1b2f065b9682b1bfa94e0f32e3a2f27d 3852 PRINTS PR00313 NodO calcium binding signature 3731 3739 1.4E-6 T 12-10-2018 M634_09300 1b2f065b9682b1bfa94e0f32e3a2f27d 3852 Pfam PF13519 von Willebrand factor type A domain 3368 3481 1.1E-9 T 12-10-2018 IPR002035 von Willebrand factor, type A M634_09300 1b2f065b9682b1bfa94e0f32e3a2f27d 3852 SUPERFAMILY SSF53300 3327 3484 5.4E-18 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily M634_09300 1b2f065b9682b1bfa94e0f32e3a2f27d 3852 SUPERFAMILY SSF51120 3628 3786 1.83E-23 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal M634_09300 1b2f065b9682b1bfa94e0f32e3a2f27d 3852 Gene3D G3DSA:3.40.50.410 3363 3534 1.1E-15 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily M634_09300 1b2f065b9682b1bfa94e0f32e3a2f27d 3852 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 3709 3727 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site M634_09300 1b2f065b9682b1bfa94e0f32e3a2f27d 3852 SUPERFAMILY SSF141072 2798 2903 1.07E-7 T 12-10-2018 IPR038081 CalX-like domain superfamily M634_02410 5abf2ff5858f75a5b2e5b860c658680c 58 Pfam PF07043 Protein of unknown function (DUF1328) 7 44 7.7E-11 T 12-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 M634_02410 5abf2ff5858f75a5b2e5b860c658680c 58 PIRSF PIRSF036466 1 55 4.1E-20 T 12-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 M634_02410 5abf2ff5858f75a5b2e5b860c658680c 58 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 56 16.217 T 12-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 M634_20530 86e3609c0927c6d7d88d930d63d5f632 403 ProSitePatterns PS00737 Thiolases signature 2. 348 364 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 M634_20530 86e3609c0927c6d7d88d930d63d5f632 403 Gene3D G3DSA:3.40.47.10 127 399 1.6E-150 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M634_20530 86e3609c0927c6d7d88d930d63d5f632 403 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 85 103 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 M634_20530 86e3609c0927c6d7d88d930d63d5f632 403 SUPERFAMILY SSF53901 272 400 3.02E-39 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M634_20530 86e3609c0927c6d7d88d930d63d5f632 403 SUPERFAMILY SSF53901 5 271 3.51E-85 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M634_20530 86e3609c0927c6d7d88d930d63d5f632 403 Pfam PF00108 Thiolase, N-terminal domain 5 264 4.3E-99 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 M634_20530 86e3609c0927c6d7d88d930d63d5f632 403 ProSitePatterns PS00099 Thiolases active site. 383 396 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 M634_20530 86e3609c0927c6d7d88d930d63d5f632 403 Gene3D G3DSA:3.40.47.10 7 277 1.6E-150 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M634_20530 86e3609c0927c6d7d88d930d63d5f632 403 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 400 6.5E-150 T 12-10-2018 IPR002155 Thiolase GO:0016747 M634_20530 86e3609c0927c6d7d88d930d63d5f632 403 PIRSF PIRSF000429 1 403 8.2E-134 T 12-10-2018 IPR002155 Thiolase GO:0016747 M634_20530 86e3609c0927c6d7d88d930d63d5f632 403 Pfam PF02803 Thiolase, C-terminal domain 271 400 8.8E-46 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 M634_08395 86fb646b3dcc3ec9b9c473e8fe352841 391 Pfam PF02222 ATP-grasp domain 121 293 5.6E-58 T 12-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type M634_08395 86fb646b3dcc3ec9b9c473e8fe352841 391 Gene3D G3DSA:3.40.50.20 1 120 2.7E-53 T 12-10-2018 M634_08395 86fb646b3dcc3ec9b9c473e8fe352841 391 SUPERFAMILY SSF56059 111 313 9.19E-58 T 12-10-2018 M634_08395 86fb646b3dcc3ec9b9c473e8fe352841 391 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 12 389 4.0E-191 T 12-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 M634_08395 86fb646b3dcc3ec9b9c473e8fe352841 391 Gene3D G3DSA:3.30.470.20 195 389 5.7E-60 T 12-10-2018 M634_08395 86fb646b3dcc3ec9b9c473e8fe352841 391 Gene3D G3DSA:3.30.1490.20 121 194 1.6E-34 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 M634_08395 86fb646b3dcc3ec9b9c473e8fe352841 391 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 6 390 52.011 T 12-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 M634_08395 86fb646b3dcc3ec9b9c473e8fe352841 391 SUPERFAMILY SSF52440 2 110 3.45E-34 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily M634_08395 86fb646b3dcc3ec9b9c473e8fe352841 391 SUPERFAMILY SSF51246 317 389 5.18E-18 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 M634_05270 a442f44dde8d37ab730054c0a00e1ca0 490 PRINTS PR00934 X-His dipeptidase (M25) signature 163 181 4.4E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 M634_05270 a442f44dde8d37ab730054c0a00e1ca0 490 PRINTS PR00934 X-His dipeptidase (M25) signature 210 227 4.4E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 M634_05270 a442f44dde8d37ab730054c0a00e1ca0 490 PRINTS PR00934 X-His dipeptidase (M25) signature 105 123 4.4E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 M634_05270 a442f44dde8d37ab730054c0a00e1ca0 490 PRINTS PR00934 X-His dipeptidase (M25) signature 84 103 4.4E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 M634_05270 a442f44dde8d37ab730054c0a00e1ca0 490 PRINTS PR00934 X-His dipeptidase (M25) signature 367 385 4.4E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 M634_05270 a442f44dde8d37ab730054c0a00e1ca0 490 PRINTS PR00934 X-His dipeptidase (M25) signature 255 274 4.4E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 M634_05270 a442f44dde8d37ab730054c0a00e1ca0 490 PRINTS PR00934 X-His dipeptidase (M25) signature 454 476 4.4E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 M634_05270 a442f44dde8d37ab730054c0a00e1ca0 490 PRINTS PR00934 X-His dipeptidase (M25) signature 139 156 4.4E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 M634_05270 a442f44dde8d37ab730054c0a00e1ca0 490 PRINTS PR00934 X-His dipeptidase (M25) signature 432 448 4.4E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 M634_05270 a442f44dde8d37ab730054c0a00e1ca0 490 Pfam PF01546 Peptidase family M20/M25/M40 77 473 2.8E-21 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 M634_05270 a442f44dde8d37ab730054c0a00e1ca0 490 PIRSF PIRSF016599 5 489 3.2E-217 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 M634_05270 a442f44dde8d37ab730054c0a00e1ca0 490 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 13 486 6.6E-183 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 M634_05270 a442f44dde8d37ab730054c0a00e1ca0 490 SUPERFAMILY SSF53187 15 486 1.28E-62 T 12-10-2018 M634_05270 a442f44dde8d37ab730054c0a00e1ca0 490 Gene3D G3DSA:3.40.630.10 376 490 6.3E-24 T 12-10-2018 M634_05270 a442f44dde8d37ab730054c0a00e1ca0 490 Gene3D G3DSA:3.40.630.10 1 233 1.3E-65 T 12-10-2018 M634_05270 a442f44dde8d37ab730054c0a00e1ca0 490 Pfam PF07687 Peptidase dimerisation domain 211 296 1.6E-8 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain M634_18480 ec96a0dbb4d8ab9bfa966723ac0739a3 295 SUPERFAMILY SSF53850 88 291 1.48E-44 T 12-10-2018 M634_18480 ec96a0dbb4d8ab9bfa966723ac0739a3 295 Gene3D G3DSA:3.40.190.290 90 289 1.2E-62 T 12-10-2018 M634_18480 ec96a0dbb4d8ab9bfa966723ac0739a3 295 Gene3D G3DSA:1.10.10.10 3 87 4.7E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_18480 ec96a0dbb4d8ab9bfa966723ac0739a3 295 SUPERFAMILY SSF46785 6 110 8.76E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_18480 ec96a0dbb4d8ab9bfa966723ac0739a3 295 Pfam PF03466 LysR substrate binding domain 87 289 4.0E-41 T 12-10-2018 IPR005119 LysR, substrate-binding M634_18480 ec96a0dbb4d8ab9bfa966723ac0739a3 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 63 1.1E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_04640 c12396daaa9dd101ebdabd47d75487c2 103 Pfam PF01371 Trp repressor protein 9 93 5.0E-33 T 12-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 M634_04640 c12396daaa9dd101ebdabd47d75487c2 103 SUPERFAMILY SSF48295 2 94 1.1E-28 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 M634_04640 c12396daaa9dd101ebdabd47d75487c2 103 Gene3D G3DSA:1.10.1270.10 1 98 3.1E-33 T 12-10-2018 IPR038116 TrpR-like superfamily M634_04640 c12396daaa9dd101ebdabd47d75487c2 103 PIRSF PIRSF003196 1 100 2.2E-39 T 12-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 M634_04640 c12396daaa9dd101ebdabd47d75487c2 103 Hamap MF_00475 Trp operon repressor [trpR]. 6 103 23.815 T 12-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 M634_04640 c12396daaa9dd101ebdabd47d75487c2 103 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 4 78 2.0E-37 T 12-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 M634_04640 c12396daaa9dd101ebdabd47d75487c2 103 TIGRFAM TIGR01321 TrpR: trp operon repressor 6 88 5.7E-25 T 12-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 M634_03655 818c00d1b3a77c4062e2f04a511d5735 126 SUPERFAMILY SSF110069 5 126 1.06E-46 T 12-10-2018 IPR036767 ApaG domain superfamily M634_03655 818c00d1b3a77c4062e2f04a511d5735 126 Hamap MF_00791 Protein ApaG [apaG]. 1 126 31.563 T 12-10-2018 IPR023065 Uncharacterised protein family ApaG M634_03655 818c00d1b3a77c4062e2f04a511d5735 126 Pfam PF04379 ApaG domain 18 103 1.7E-33 T 12-10-2018 IPR007474 ApaG domain M634_03655 818c00d1b3a77c4062e2f04a511d5735 126 Gene3D G3DSA:2.60.40.1470 1 126 6.1E-47 T 12-10-2018 IPR036767 ApaG domain superfamily M634_06430 64828b58367599576192f05a3cc7c4c1 395 SMART SM00825 Beta-ketoacyl synthase 61 338 1.7E-8 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain M634_06430 64828b58367599576192f05a3cc7c4c1 395 Gene3D G3DSA:3.40.47.10 246 389 2.1E-41 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M634_06430 64828b58367599576192f05a3cc7c4c1 395 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 244 351 1.7E-27 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal M634_06430 64828b58367599576192f05a3cc7c4c1 395 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 100 236 1.4E-19 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal M634_06430 64828b58367599576192f05a3cc7c4c1 395 SUPERFAMILY SSF53901 210 391 1.39E-46 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M634_06430 64828b58367599576192f05a3cc7c4c1 395 SUPERFAMILY SSF53901 7 236 4.45E-37 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M634_06430 64828b58367599576192f05a3cc7c4c1 395 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site M634_06430 64828b58367599576192f05a3cc7c4c1 395 Gene3D G3DSA:3.40.47.10 22 242 4.7E-30 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M634_07525 536ce9031202faf6cb9ca3d8f74d38a1 241 Pfam PF00106 short chain dehydrogenase 4 183 3.7E-39 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_07525 536ce9031202faf6cb9ca3d8f74d38a1 241 Gene3D G3DSA:3.40.50.720 3 215 2.2E-51 T 12-10-2018 M634_07525 536ce9031202faf6cb9ca3d8f74d38a1 241 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 129 157 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 M634_07525 536ce9031202faf6cb9ca3d8f74d38a1 241 SUPERFAMILY SSF51735 3 236 2.13E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_07525 536ce9031202faf6cb9ca3d8f74d38a1 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 116 132 2.2E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_07525 536ce9031202faf6cb9ca3d8f74d38a1 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 161 2.2E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_07525 536ce9031202faf6cb9ca3d8f74d38a1 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.2E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_07525 536ce9031202faf6cb9ca3d8f74d38a1 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 180 2.2E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_10335 9d466d98fc08a8f1a7a26506de8f8484 275 Pfam PF12833 Helix-turn-helix domain 191 269 2.6E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_10335 9d466d98fc08a8f1a7a26506de8f8484 275 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 251 267 7.3E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M634_10335 9d466d98fc08a8f1a7a26506de8f8484 275 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 236 251 7.3E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M634_10335 9d466d98fc08a8f1a7a26506de8f8484 275 SMART SM00342 185 267 6.1E-28 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_10335 9d466d98fc08a8f1a7a26506de8f8484 275 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 221 263 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 M634_10335 9d466d98fc08a8f1a7a26506de8f8484 275 Gene3D G3DSA:1.10.10.60 166 274 6.1E-30 T 12-10-2018 M634_10335 9d466d98fc08a8f1a7a26506de8f8484 275 SUPERFAMILY SSF46689 221 270 4.93E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_17820 ba0d4dd5aeb1bc8963530d449916395d 506 ProSitePatterns PS00211 ABC transporters family signature. 402 416 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_17820 ba0d4dd5aeb1bc8963530d449916395d 506 Pfam PF00005 ABC transporter 275 429 8.8E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_17820 ba0d4dd5aeb1bc8963530d449916395d 506 Gene3D G3DSA:3.40.50.300 3 250 3.5E-58 T 12-10-2018 M634_17820 ba0d4dd5aeb1bc8963530d449916395d 506 Gene3D G3DSA:3.40.50.300 267 504 1.7E-43 T 12-10-2018 M634_17820 ba0d4dd5aeb1bc8963530d449916395d 506 SUPERFAMILY SSF52540 272 491 2.66E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_17820 ba0d4dd5aeb1bc8963530d449916395d 506 SMART SM00382 283 478 1.0E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_17820 ba0d4dd5aeb1bc8963530d449916395d 506 SMART SM00382 34 228 3.1E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_17820 ba0d4dd5aeb1bc8963530d449916395d 506 Pfam PF00005 ABC transporter 25 174 4.8E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_17820 ba0d4dd5aeb1bc8963530d449916395d 506 SUPERFAMILY SSF52540 9 227 4.15E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_19535 ea2635d567b1874ef05c6f047aef558c 299 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 141 2.4E-12 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 M634_19535 ea2635d567b1874ef05c6f047aef558c 299 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 185 5.9E-55 T 12-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 M634_19535 ea2635d567b1874ef05c6f047aef558c 299 SUPERFAMILY SSF64518 1 297 1.7E-52 T 12-10-2018 M634_08335 997eedf089737e86566595de677f17ab 269 Gene3D G3DSA:1.10.260.40 2 68 6.5E-6 T 12-10-2018 M634_08335 997eedf089737e86566595de677f17ab 269 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 13 66 6.2E-8 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 M634_08335 997eedf089737e86566595de677f17ab 269 SUPERFAMILY SSF47413 6 71 1.13E-9 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M634_08335 997eedf089737e86566595de677f17ab 269 SMART SM00530 12 66 1.5E-4 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 M634_19370 495766ab57d6bee80219da24ca203dfd 574 SUPERFAMILY SSF161098 31 284 6.87E-43 T 12-10-2018 IPR035906 MetI-like superfamily M634_19370 495766ab57d6bee80219da24ca203dfd 574 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 287 1.5E-9 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_19370 495766ab57d6bee80219da24ca203dfd 574 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 392 561 6.9E-9 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_19370 495766ab57d6bee80219da24ca203dfd 574 Gene3D G3DSA:1.10.3720.10 28 291 2.9E-49 T 12-10-2018 IPR035906 MetI-like superfamily M634_19370 495766ab57d6bee80219da24ca203dfd 574 Gene3D G3DSA:1.10.3720.10 310 564 3.7E-29 T 12-10-2018 IPR035906 MetI-like superfamily M634_19370 495766ab57d6bee80219da24ca203dfd 574 SUPERFAMILY SSF161098 305 558 7.85E-33 T 12-10-2018 IPR035906 MetI-like superfamily M634_19370 495766ab57d6bee80219da24ca203dfd 574 TIGRFAM TIGR03262 PhnU2: putative 2-aminoethylphosphonate ABC transporter, permease protein 32 574 3.6E-255 T 12-10-2018 IPR017664 2-aminoethylphosphonate ABC transport system, permease protein, putative M634_01160 a31f9601743dcd594d6cce4665ca80f9 321 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 8 318 32.597 T 12-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 M634_01160 a31f9601743dcd594d6cce4665ca80f9 321 Pfam PF02237 Biotin protein ligase C terminal domain 272 318 3.6E-11 T 12-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 M634_01160 a31f9601743dcd594d6cce4665ca80f9 321 Gene3D G3DSA:3.30.930.10 67 271 2.4E-65 T 12-10-2018 M634_01160 a31f9601743dcd594d6cce4665ca80f9 321 SUPERFAMILY SSF55681 72 269 8.52E-61 T 12-10-2018 M634_01160 a31f9601743dcd594d6cce4665ca80f9 321 Pfam PF03099 Biotin/lipoate A/B protein ligase family 85 208 3.6E-20 T 12-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 M634_01160 a31f9601743dcd594d6cce4665ca80f9 321 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 82 318 9.5E-67 T 12-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 M634_01160 a31f9601743dcd594d6cce4665ca80f9 321 Gene3D G3DSA:2.30.30.100 272 314 2.2E-20 T 12-10-2018 M634_01160 a31f9601743dcd594d6cce4665ca80f9 321 SUPERFAMILY SSF46785 7 62 4.31E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_01160 a31f9601743dcd594d6cce4665ca80f9 321 SUPERFAMILY SSF50037 272 318 1.05E-10 T 12-10-2018 IPR008988 Transcriptional repressor, C-terminal M634_01160 a31f9601743dcd594d6cce4665ca80f9 321 Pfam PF08279 HTH domain 9 60 2.5E-12 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 M634_01160 a31f9601743dcd594d6cce4665ca80f9 321 Gene3D G3DSA:1.10.10.10 2 65 1.9E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_20505 ed15e0e810cc265ed6892c5efb9926f9 612 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 348 590 3.5E-73 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial M634_20505 ed15e0e810cc265ed6892c5efb9926f9 612 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 15 612 42.952 T 12-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 M634_20505 ed15e0e810cc265ed6892c5efb9926f9 612 SUPERFAMILY SSF82866 407 604 7.85E-41 T 12-10-2018 M634_20505 ed15e0e810cc265ed6892c5efb9926f9 612 Gene3D G3DSA:3.30.1360.200 288 428 1.0E-46 T 12-10-2018 M634_20505 ed15e0e810cc265ed6892c5efb9926f9 612 Gene3D G3DSA:3.30.70.3400 230 434 1.0E-46 T 12-10-2018 M634_20505 ed15e0e810cc265ed6892c5efb9926f9 612 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 134 598 1.4E-131 T 12-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 M634_20505 ed15e0e810cc265ed6892c5efb9926f9 612 Pfam PF07549 SecD/SecF GG Motif 128 150 2.1E-4 T 12-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site M634_20505 ed15e0e810cc265ed6892c5efb9926f9 612 Pfam PF13721 SecD export protein N-terminal TM region 14 110 2.3E-22 T 12-10-2018 IPR027398 SecD export protein N-terminal TM domain M634_20505 ed15e0e810cc265ed6892c5efb9926f9 612 Pfam PF02355 Protein export membrane protein 430 598 5.0E-18 T 12-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial M634_02995 dbcaa13658628e06d83e5dea62bf9986 236 Gene3D G3DSA:1.10.510.10 144 236 2.6E-15 T 12-10-2018 M634_02995 dbcaa13658628e06d83e5dea62bf9986 236 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 30 232 2.5E-65 T 12-10-2018 M634_02995 dbcaa13658628e06d83e5dea62bf9986 236 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 2 234 43.078 T 12-10-2018 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676 M634_02995 dbcaa13658628e06d83e5dea62bf9986 236 SUPERFAMILY SSF56112 45 197 7.82E-19 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily M634_24310 269f062756e7310ee778d1482424431a 304 SUPERFAMILY SSF52172 171 292 2.85E-21 T 12-10-2018 IPR011006 CheY-like superfamily M634_24310 269f062756e7310ee778d1482424431a 304 Pfam PF01584 CheW-like domain 14 149 8.9E-30 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 M634_24310 269f062756e7310ee778d1482424431a 304 SUPERFAMILY SSF50341 10 152 1.23E-29 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 M634_24310 269f062756e7310ee778d1482424431a 304 PIRSF PIRSF002867 1 298 1.4E-87 T 12-10-2018 IPR024181 Chemotaxis response regulator CheV M634_24310 269f062756e7310ee778d1482424431a 304 Pfam PF00072 Response regulator receiver domain 175 289 1.9E-15 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_24310 269f062756e7310ee778d1482424431a 304 Gene3D G3DSA:2.40.50.180 31 146 1.0E-23 T 12-10-2018 M634_24310 269f062756e7310ee778d1482424431a 304 SMART SM00448 173 290 2.1E-15 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_24310 269f062756e7310ee778d1482424431a 304 Gene3D G3DSA:2.30.30.40 17 141 1.0E-23 T 12-10-2018 M634_24310 269f062756e7310ee778d1482424431a 304 SMART SM00260 11 147 2.1E-20 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 M634_24310 269f062756e7310ee778d1482424431a 304 Gene3D G3DSA:3.40.50.2300 163 299 1.1E-22 T 12-10-2018 M634_12435 7b0203f16319d81a57a644dc784a06cb 255 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 253 5.0E-95 T 12-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 M634_12435 7b0203f16319d81a57a644dc784a06cb 255 SUPERFAMILY SSF51556 1 253 1.48E-88 T 12-10-2018 IPR032466 Metal-dependent hydrolase M634_12435 7b0203f16319d81a57a644dc784a06cb 255 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 M634_12435 7b0203f16319d81a57a644dc784a06cb 255 Gene3D G3DSA:3.20.20.140 1 255 5.0E-101 T 12-10-2018 M634_12435 7b0203f16319d81a57a644dc784a06cb 255 Pfam PF01026 TatD related DNase 3 253 4.3E-80 T 12-10-2018 IPR001130 TatD family GO:0016788 M634_12435 7b0203f16319d81a57a644dc784a06cb 255 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 M634_12435 7b0203f16319d81a57a644dc784a06cb 255 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 125 135 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 M634_12435 7b0203f16319d81a57a644dc784a06cb 255 PIRSF PIRSF005902 1 255 2.6E-83 T 12-10-2018 IPR001130 TatD family GO:0016788 M634_12215 e1c2b158233fed021a9546acd3b55937 270 TIGRFAM TIGR02594 TIGR02594: TIGR02594 family protein 110 238 1.5E-31 T 12-10-2018 IPR013423 Conserved hypothetical protein CHP02594 M634_12215 e1c2b158233fed021a9546acd3b55937 270 Pfam PF05257 CHAP domain 151 225 7.5E-6 T 12-10-2018 IPR007921 CHAP domain M634_07250 598f6e25d0c8d028f067b3ad6ca37fad 538 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 17 511 2.5E-178 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 M634_07250 598f6e25d0c8d028f067b3ad6ca37fad 538 PIRSF PIRSF006446 345 536 3.6E-33 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 M634_07250 598f6e25d0c8d028f067b3ad6ca37fad 538 PIRSF PIRSF006446 10 339 4.6E-115 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 M634_10245 c4b7ddaa696e97277a8fac144c941bc7 327 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 15 306 5.8E-87 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 M634_10245 c4b7ddaa696e97277a8fac144c941bc7 327 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 15 315 1.3E-141 T 12-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 M634_10245 c4b7ddaa696e97277a8fac144c941bc7 327 PIRSF PIRSF026649 12 315 9.3E-90 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 M634_10245 c4b7ddaa696e97277a8fac144c941bc7 327 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 14 315 46.899 T 12-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 M634_17155 37887b0606e65146743c67598c915809 123 PRINTS PR00956 Flagellar motor switch protein FliN signature 90 105 4.2E-17 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 M634_17155 37887b0606e65146743c67598c915809 123 PRINTS PR00956 Flagellar motor switch protein FliN signature 44 60 4.2E-17 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 M634_17155 37887b0606e65146743c67598c915809 123 PRINTS PR00956 Flagellar motor switch protein FliN signature 61 77 4.2E-17 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 M634_17155 37887b0606e65146743c67598c915809 123 PRINTS PR00956 Flagellar motor switch protein FliN signature 77 90 4.2E-17 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 M634_17155 37887b0606e65146743c67598c915809 123 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 46 113 1.1E-19 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) M634_17155 37887b0606e65146743c67598c915809 123 SUPERFAMILY SSF101801 41 116 4.05E-19 T 12-10-2018 IPR036429 SpoA-like superfamily M634_17155 37887b0606e65146743c67598c915809 123 Gene3D G3DSA:2.30.330.10 30 119 5.1E-23 T 12-10-2018 IPR036429 SpoA-like superfamily M634_17155 37887b0606e65146743c67598c915809 123 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 42 116 8.0E-29 T 12-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 M634_17605 9751fc303241e0df544d3acc204541ca 405 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 3 404 36.658 T 12-10-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 M634_17605 9751fc303241e0df544d3acc204541ca 405 Pfam PF00375 Sodium:dicarboxylate symporter family 15 398 5.0E-66 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 M634_17605 9751fc303241e0df544d3acc204541ca 405 Gene3D G3DSA:1.10.3860.10 3 405 4.8E-72 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 M634_17605 9751fc303241e0df544d3acc204541ca 405 PRINTS PR00173 Glutamate-aspartate symporter signature 13 33 1.1E-12 T 12-10-2018 M634_17605 9751fc303241e0df544d3acc204541ca 405 PRINTS PR00173 Glutamate-aspartate symporter signature 322 341 1.1E-12 T 12-10-2018 M634_17605 9751fc303241e0df544d3acc204541ca 405 PRINTS PR00173 Glutamate-aspartate symporter signature 185 204 1.1E-12 T 12-10-2018 M634_17605 9751fc303241e0df544d3acc204541ca 405 PRINTS PR00173 Glutamate-aspartate symporter signature 287 313 1.1E-12 T 12-10-2018 M634_17605 9751fc303241e0df544d3acc204541ca 405 PRINTS PR00173 Glutamate-aspartate symporter signature 220 239 1.1E-12 T 12-10-2018 M634_17605 9751fc303241e0df544d3acc204541ca 405 SUPERFAMILY SSF118215 15 399 2.09E-97 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 M634_17935 6296b59a7472cbe4c5cb90f8b43f318c 277 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 225 266 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 M634_17935 6296b59a7472cbe4c5cb90f8b43f318c 277 SUPERFAMILY SSF51182 31 196 6.67E-14 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily M634_17935 6296b59a7472cbe4c5cb90f8b43f318c 277 SMART SM00342 188 270 8.0E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_17935 6296b59a7472cbe4c5cb90f8b43f318c 277 Gene3D G3DSA:1.10.10.60 170 273 2.7E-19 T 12-10-2018 M634_17935 6296b59a7472cbe4c5cb90f8b43f318c 277 Pfam PF12833 Helix-turn-helix domain 196 270 2.2E-17 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_17935 6296b59a7472cbe4c5cb90f8b43f318c 277 Gene3D G3DSA:2.60.120.10 9 109 1.0E-6 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M634_17935 6296b59a7472cbe4c5cb90f8b43f318c 277 SUPERFAMILY SSF46689 225 272 3.26E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_19025 af064b2f4dc6a2321497c0c232495067 451 Gene3D G3DSA:3.40.50.300 136 315 4.8E-58 T 12-10-2018 M634_19025 af064b2f4dc6a2321497c0c232495067 451 Pfam PF02954 Bacterial regulatory protein, Fis family 402 441 3.1E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M634_19025 af064b2f4dc6a2321497c0c232495067 451 SMART SM00448 7 118 4.9E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_19025 af064b2f4dc6a2321497c0c232495067 451 SUPERFAMILY SSF46689 390 443 7.17E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_19025 af064b2f4dc6a2321497c0c232495067 451 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 234 249 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M634_19025 af064b2f4dc6a2321497c0c232495067 451 Gene3D G3DSA:3.40.50.2300 2 134 2.2E-33 T 12-10-2018 M634_19025 af064b2f4dc6a2321497c0c232495067 451 Pfam PF00072 Response regulator receiver domain 9 118 5.6E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_19025 af064b2f4dc6a2321497c0c232495067 451 SUPERFAMILY SSF52540 148 370 3.7E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_19025 af064b2f4dc6a2321497c0c232495067 451 Pfam PF00158 Sigma-54 interaction domain 148 311 3.8E-64 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 M634_19025 af064b2f4dc6a2321497c0c232495067 451 SMART SM00382 168 308 6.4E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_19025 af064b2f4dc6a2321497c0c232495067 451 SUPERFAMILY SSF52172 6 191 6.97E-39 T 12-10-2018 IPR011006 CheY-like superfamily M634_19025 af064b2f4dc6a2321497c0c232495067 451 Gene3D G3DSA:1.10.10.60 381 446 1.2E-6 T 12-10-2018 M634_19025 af064b2f4dc6a2321497c0c232495067 451 Gene3D G3DSA:1.10.8.60 316 376 2.0E-12 T 12-10-2018 M634_19025 af064b2f4dc6a2321497c0c232495067 451 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site M634_01025 a7fe7f129311e398727bf9c00abc051e 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 5.7E-19 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 M634_01025 a7fe7f129311e398727bf9c00abc051e 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 5.7E-19 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 M634_01025 a7fe7f129311e398727bf9c00abc051e 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 5.7E-19 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 M634_01025 a7fe7f129311e398727bf9c00abc051e 90 Gene3D G3DSA:4.10.520.10 1 90 4.5E-37 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 M634_01025 a7fe7f129311e398727bf9c00abc051e 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.7E-33 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 M634_01025 a7fe7f129311e398727bf9c00abc051e 90 SMART SM00411 1 90 1.6E-46 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 M634_01025 a7fe7f129311e398727bf9c00abc051e 90 SUPERFAMILY SSF47729 1 90 5.3E-33 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 M634_01025 a7fe7f129311e398727bf9c00abc051e 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 M634_16095 eee73d15dd6ca2d53183bef640368b55 941 SUPERFAMILY SSF52540 5 569 1.91E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_16095 eee73d15dd6ca2d53183bef640368b55 941 Gene3D G3DSA:1.10.8.280 287 403 2.3E-246 T 12-10-2018 M634_16095 eee73d15dd6ca2d53183bef640368b55 941 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 924 0.0 T 12-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 M634_16095 eee73d15dd6ca2d53183bef640368b55 941 Gene3D G3DSA:3.30.190.20 131 244 2.3E-246 T 12-10-2018 M634_16095 eee73d15dd6ca2d53183bef640368b55 941 Gene3D G3DSA:1.20.1580.10 91 492 2.3E-246 T 12-10-2018 M634_16095 eee73d15dd6ca2d53183bef640368b55 941 SUPERFAMILY SSF52540 621 913 4.28E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_16095 eee73d15dd6ca2d53183bef640368b55 941 Gene3D G3DSA:1.20.1580.10 692 830 5.4E-141 T 12-10-2018 M634_16095 eee73d15dd6ca2d53183bef640368b55 941 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_16095 eee73d15dd6ca2d53183bef640368b55 941 Pfam PF00005 ABC transporter 623 860 5.4E-10 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_16095 eee73d15dd6ca2d53183bef640368b55 941 Gene3D G3DSA:3.40.50.300 7 594 2.3E-246 T 12-10-2018 M634_16095 eee73d15dd6ca2d53183bef640368b55 941 Gene3D G3DSA:3.40.50.300 617 936 5.4E-141 T 12-10-2018 M634_16095 eee73d15dd6ca2d53183bef640368b55 941 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_16095 eee73d15dd6ca2d53183bef640368b55 941 Hamap MF_00205 UvrABC system protein A [uvrA]. 2 940 22.95 T 12-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 M634_22690 82ff422e80245826056e07c5595ea243 567 SUPERFAMILY SSF51905 155 340 3.66E-28 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_22690 82ff422e80245826056e07c5595ea243 567 SMART SM00450 473 567 3.9E-13 T 12-10-2018 IPR001763 Rhodanese-like domain M634_22690 82ff422e80245826056e07c5595ea243 567 SUPERFAMILY SSF51905 2 197 7.13E-40 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_22690 82ff422e80245826056e07c5595ea243 567 SUPERFAMILY SSF55424 344 467 3.26E-35 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 M634_22690 82ff422e80245826056e07c5595ea243 567 Gene3D G3DSA:3.50.50.60 115 461 5.8E-188 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_22690 82ff422e80245826056e07c5595ea243 567 SUPERFAMILY SSF52821 458 563 7.2E-24 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M634_22690 82ff422e80245826056e07c5595ea243 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 8.6E-23 T 12-10-2018 M634_22690 82ff422e80245826056e07c5595ea243 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 8.6E-23 T 12-10-2018 M634_22690 82ff422e80245826056e07c5595ea243 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 8.6E-23 T 12-10-2018 M634_22690 82ff422e80245826056e07c5595ea243 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 8.6E-23 T 12-10-2018 M634_22690 82ff422e80245826056e07c5595ea243 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 272 8.6E-23 T 12-10-2018 M634_22690 82ff422e80245826056e07c5595ea243 567 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 328 3.8E-52 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 M634_22690 82ff422e80245826056e07c5595ea243 567 Gene3D G3DSA:3.50.50.60 3 361 5.8E-188 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_22690 82ff422e80245826056e07c5595ea243 567 Pfam PF00581 Rhodanese-like domain 485 563 2.0E-9 T 12-10-2018 IPR001763 Rhodanese-like domain M634_22690 82ff422e80245826056e07c5595ea243 567 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 350 451 1.9E-16 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 M634_22690 82ff422e80245826056e07c5595ea243 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 2.2E-19 T 12-10-2018 M634_22690 82ff422e80245826056e07c5595ea243 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 2.2E-19 T 12-10-2018 M634_22690 82ff422e80245826056e07c5595ea243 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 153 178 2.2E-19 T 12-10-2018 M634_22690 82ff422e80245826056e07c5595ea243 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 257 271 2.2E-19 T 12-10-2018 M634_22690 82ff422e80245826056e07c5595ea243 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 2.2E-19 T 12-10-2018 M634_22690 82ff422e80245826056e07c5595ea243 567 Gene3D G3DSA:3.40.250.10 471 565 3.2E-24 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M634_21320 ec1a30e8c17f252de6707a821939ff93 301 Pfam PF03466 LysR substrate binding domain 97 294 1.3E-19 T 12-10-2018 IPR005119 LysR, substrate-binding M634_21320 ec1a30e8c17f252de6707a821939ff93 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.2E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_21320 ec1a30e8c17f252de6707a821939ff93 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.2E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_21320 ec1a30e8c17f252de6707a821939ff93 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.2E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_21320 ec1a30e8c17f252de6707a821939ff93 301 Gene3D G3DSA:1.10.10.10 1 85 5.3E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_21320 ec1a30e8c17f252de6707a821939ff93 301 Gene3D G3DSA:3.40.190.10 88 292 4.8E-46 T 12-10-2018 M634_21320 ec1a30e8c17f252de6707a821939ff93 301 SUPERFAMILY SSF46785 3 80 2.95E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_21320 ec1a30e8c17f252de6707a821939ff93 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 2.1E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_21320 ec1a30e8c17f252de6707a821939ff93 301 SUPERFAMILY SSF53850 88 293 8.51E-34 T 12-10-2018 M634_21320 ec1a30e8c17f252de6707a821939ff93 301 Gene3D G3DSA:3.40.190.10 169 267 4.8E-46 T 12-10-2018 M634_20645 47fe84bd68e4f727a0abef3d53e274d5 522 SUPERFAMILY SSF58104 263 517 3.66E-57 T 12-10-2018 M634_20645 47fe84bd68e4f727a0abef3d53e274d5 522 Pfam PF08447 PAS fold 31 114 8.4E-14 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 M634_20645 47fe84bd68e4f727a0abef3d53e274d5 522 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 334 484 1.6E-33 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_20645 47fe84bd68e4f727a0abef3d53e274d5 522 Gene3D G3DSA:3.30.450.20 4 120 9.2E-24 T 12-10-2018 M634_20645 47fe84bd68e4f727a0abef3d53e274d5 522 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 112 3.8E-12 T 12-10-2018 IPR000014 PAS domain M634_20645 47fe84bd68e4f727a0abef3d53e274d5 522 Gene3D G3DSA:1.10.287.950 192 518 2.7E-54 T 12-10-2018 M634_20645 47fe84bd68e4f727a0abef3d53e274d5 522 SMART SM00283 257 518 3.8E-42 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_20645 47fe84bd68e4f727a0abef3d53e274d5 522 SUPERFAMILY SSF55785 20 114 5.23E-25 T 12-10-2018 IPR035965 PAS domain superfamily M634_03240 1bc1d3f2186cc6c38fe45ce6ca5b60e4 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 103 8.5E-7 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 M634_03240 1bc1d3f2186cc6c38fe45ce6ca5b60e4 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 43.165 T 12-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 M634_03240 1bc1d3f2186cc6c38fe45ce6ca5b60e4 443 Gene3D G3DSA:1.10.8.60 335 440 1.7E-39 T 12-10-2018 M634_03240 1bc1d3f2186cc6c38fe45ce6ca5b60e4 443 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 335 404 8.9E-5 T 12-10-2018 IPR019489 Clp ATPase, C-terminal M634_03240 1bc1d3f2186cc6c38fe45ce6ca5b60e4 443 SMART SM00382 49 332 6.9E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_03240 1bc1d3f2186cc6c38fe45ce6ca5b60e4 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 1.0E-222 T 12-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 M634_03240 1bc1d3f2186cc6c38fe45ce6ca5b60e4 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 171 329 2.8E-43 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 M634_03240 1bc1d3f2186cc6c38fe45ce6ca5b60e4 443 SUPERFAMILY SSF52540 3 441 1.21E-94 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_03240 1bc1d3f2186cc6c38fe45ce6ca5b60e4 443 SMART SM01086 335 429 6.1E-20 T 12-10-2018 IPR019489 Clp ATPase, C-terminal M634_18250 8739027713ea096dc1c627d59cb16225 238 Gene3D G3DSA:3.30.70.980 83 235 1.1E-44 T 12-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_18250 8739027713ea096dc1c627d59cb16225 238 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 238 26.84 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_18250 8739027713ea096dc1c627d59cb16225 238 Pfam PF01709 Transcriptional regulator 5 236 1.3E-70 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_18250 8739027713ea096dc1c627d59cb16225 238 Gene3D G3DSA:3.30.70.980 131 202 1.1E-44 T 12-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_18250 8739027713ea096dc1c627d59cb16225 238 SUPERFAMILY SSF75625 1 237 1.31E-74 T 12-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_18250 8739027713ea096dc1c627d59cb16225 238 Gene3D G3DSA:1.10.10.200 17 78 6.4E-17 T 12-10-2018 IPR017856 Integrase-like, N-terminal M634_08380 936458ad6b1d021333851a8406ab6d6d 98 Gene3D G3DSA:4.10.520.10 1 98 6.4E-38 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 M634_08380 936458ad6b1d021333851a8406ab6d6d 98 Pfam PF00216 Bacterial DNA-binding protein 3 91 2.0E-31 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 M634_08380 936458ad6b1d021333851a8406ab6d6d 98 SUPERFAMILY SSF47729 3 95 3.53E-32 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 M634_08380 936458ad6b1d021333851a8406ab6d6d 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 M634_08380 936458ad6b1d021333851a8406ab6d6d 98 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 5.9E-17 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 M634_08380 936458ad6b1d021333851a8406ab6d6d 98 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 5.9E-17 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 M634_08380 936458ad6b1d021333851a8406ab6d6d 98 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 5.9E-17 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 M634_08380 936458ad6b1d021333851a8406ab6d6d 98 SMART SM00411 3 92 1.6E-40 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 M634_08380 936458ad6b1d021333851a8406ab6d6d 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 94 1.2E-50 T 12-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 M634_08380 936458ad6b1d021333851a8406ab6d6d 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 30.604 T 12-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 M634_20020 73329f18c8cf871c482e5ded8dd9c45c 135 Pfam PF12614 Ribosome recycling factor 9 133 3.9E-58 T 12-10-2018 IPR022253 Ribosome recycling factor. bacterial M634_23010 cdc62291ecd8b51ceea671898c0c02b1 173 Gene3D G3DSA:2.40.128.20 11 173 1.9E-50 T 12-10-2018 IPR012674 Calycin M634_23010 cdc62291ecd8b51ceea671898c0c02b1 173 Pfam PF08212 Lipocalin-like domain 33 170 1.8E-37 T 12-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain M634_23010 cdc62291ecd8b51ceea671898c0c02b1 173 PIRSF PIRSF036893 1 173 1.7E-44 T 12-10-2018 IPR022271 Lipocalin, ApoD type M634_23010 cdc62291ecd8b51ceea671898c0c02b1 173 PRINTS PR01171 Bacterial lipocalin signature 67 76 5.3E-32 T 12-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 M634_23010 cdc62291ecd8b51ceea671898c0c02b1 173 PRINTS PR01171 Bacterial lipocalin signature 101 115 5.3E-32 T 12-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 M634_23010 cdc62291ecd8b51ceea671898c0c02b1 173 PRINTS PR01171 Bacterial lipocalin signature 160 170 5.3E-32 T 12-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 M634_23010 cdc62291ecd8b51ceea671898c0c02b1 173 PRINTS PR01171 Bacterial lipocalin signature 48 64 5.3E-32 T 12-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 M634_23010 cdc62291ecd8b51ceea671898c0c02b1 173 PRINTS PR01171 Bacterial lipocalin signature 31 45 5.3E-32 T 12-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 M634_23010 cdc62291ecd8b51ceea671898c0c02b1 173 PRINTS PR01171 Bacterial lipocalin signature 133 144 5.3E-32 T 12-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 M634_23010 cdc62291ecd8b51ceea671898c0c02b1 173 SUPERFAMILY SSF50814 8 172 1.25E-48 T 12-10-2018 IPR012674 Calycin M634_06105 ce719de680fa66fe61c9838585c36330 251 Pfam PF01925 Sulfite exporter TauE/SafE 10 249 8.1E-35 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 M634_17300 3b65e3994b9e71fcfc310cfdf16253f3 322 SUPERFAMILY SSF46785 6 85 9.87E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_17300 3b65e3994b9e71fcfc310cfdf16253f3 322 Gene3D G3DSA:1.10.10.10 1 90 2.4E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_17300 3b65e3994b9e71fcfc310cfdf16253f3 322 Gene3D G3DSA:3.40.190.10 98 310 4.4E-26 T 12-10-2018 M634_17300 3b65e3994b9e71fcfc310cfdf16253f3 322 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 2.2E-13 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_17300 3b65e3994b9e71fcfc310cfdf16253f3 322 SUPERFAMILY SSF53850 98 314 7.24E-24 T 12-10-2018 M634_17300 3b65e3994b9e71fcfc310cfdf16253f3 322 Pfam PF03466 LysR substrate binding domain 99 312 1.2E-10 T 12-10-2018 IPR005119 LysR, substrate-binding M634_17300 3b65e3994b9e71fcfc310cfdf16253f3 322 Gene3D G3DSA:3.40.190.10 180 281 4.4E-26 T 12-10-2018 M634_09320 91e91676397da90641f3a321b8dd445e 397 SUPERFAMILY SSF88697 4 73 3.76E-17 T 12-10-2018 IPR015947 PUA-like superfamily M634_09320 91e91676397da90641f3a321b8dd445e 397 Gene3D G3DSA:3.40.50.150 181 396 5.1E-70 T 12-10-2018 M634_09320 91e91676397da90641f3a321b8dd445e 397 Gene3D G3DSA:3.30.750.80 73 180 1.1E-36 T 12-10-2018 M634_09320 91e91676397da90641f3a321b8dd445e 397 SUPERFAMILY SSF53335 78 393 1.72E-70 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_09320 91e91676397da90641f3a321b8dd445e 397 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 397 68.623 T 12-10-2018 IPR023542 rRNA large subunit methyltransferase I GO:0008649 M634_09320 91e91676397da90641f3a321b8dd445e 397 SMART SM00359 3 87 1.2E-13 T 12-10-2018 IPR002478 PUA domain GO:0003723 M634_09320 91e91676397da90641f3a321b8dd445e 397 Gene3D G3DSA:2.30.130.10 1 72 1.3E-28 T 12-10-2018 IPR036974 PUA domain superfamily GO:0003723 M634_09320 91e91676397da90641f3a321b8dd445e 397 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 168 376 4.2E-31 T 12-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 M634_16050 4fa3beb597bdb06d7b23eb3bd60f00f8 281 Gene3D G3DSA:3.40.50.300 28 183 7.6E-14 T 12-10-2018 M634_16050 4fa3beb597bdb06d7b23eb3bd60f00f8 281 Pfam PF13401 AAA domain 42 168 6.7E-24 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_16050 4fa3beb597bdb06d7b23eb3bd60f00f8 281 SUPERFAMILY SSF52540 12 260 1.63E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_08360 57c624c0ddb8a5a30f9a8a5d0ed66674 381 Pfam PF00990 Diguanylate cyclase, GGDEF domain 207 363 2.5E-43 T 12-10-2018 IPR000160 GGDEF domain M634_08360 57c624c0ddb8a5a30f9a8a5d0ed66674 381 SMART SM00267 195 367 4.1E-48 T 12-10-2018 IPR000160 GGDEF domain M634_08360 57c624c0ddb8a5a30f9a8a5d0ed66674 381 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 202 366 6.3E-47 T 12-10-2018 IPR000160 GGDEF domain M634_08360 57c624c0ddb8a5a30f9a8a5d0ed66674 381 Gene3D G3DSA:1.20.120.50 2 136 3.9E-27 T 12-10-2018 IPR035938 Hemerythrin-like superfamily M634_08360 57c624c0ddb8a5a30f9a8a5d0ed66674 381 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 5 132 1.5E-31 T 12-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 M634_08360 57c624c0ddb8a5a30f9a8a5d0ed66674 381 Gene3D G3DSA:3.30.70.270 192 365 1.5E-50 T 12-10-2018 M634_08360 57c624c0ddb8a5a30f9a8a5d0ed66674 381 SUPERFAMILY SSF47188 3 131 1.83E-26 T 12-10-2018 IPR035938 Hemerythrin-like superfamily M634_08360 57c624c0ddb8a5a30f9a8a5d0ed66674 381 SUPERFAMILY SSF55073 211 366 1.33E-43 T 12-10-2018 IPR029787 Nucleotide cyclase M634_08360 57c624c0ddb8a5a30f9a8a5d0ed66674 381 Pfam PF01814 Hemerythrin HHE cation binding domain 13 128 1.0E-8 T 12-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 M634_19170 b6bc0dbb64606ef2f7076b6456d878f8 364 Pfam PF12060 Domain of unknown function (DUF3541) 31 253 2.4E-113 T 12-10-2018 IPR021928 Protein of unknown function DUF3541 M634_09855 0b629089def66551940d03ef4fb96f94 592 Gene3D G3DSA:2.170.190.11 236 327 1.4E-135 T 12-10-2018 M634_09855 0b629089def66551940d03ef4fb96f94 592 PIRSF PIRSF036618 1 592 0.0 T 12-10-2018 IPR012182 Bifunctional molybdenum cofactor biosynthesis MobB/MoeA M634_09855 0b629089def66551940d03ef4fb96f94 592 Gene3D G3DSA:3.40.980.10 361 512 1.4E-135 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily M634_09855 0b629089def66551940d03ef4fb96f94 592 SUPERFAMILY SSF53218 363 508 2.09E-43 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily M634_09855 0b629089def66551940d03ef4fb96f94 592 Gene3D G3DSA:3.90.105.10 213 360 1.4E-135 T 12-10-2018 M634_09855 0b629089def66551940d03ef4fb96f94 592 Pfam PF03454 MoeA C-terminal region (domain IV) 517 588 9.0E-21 T 12-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 M634_09855 0b629089def66551940d03ef4fb96f94 592 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 362 499 1.5E-31 T 12-10-2018 IPR001453 MoaB/Mog domain M634_09855 0b629089def66551940d03ef4fb96f94 592 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 439 472 - T 12-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 M634_09855 0b629089def66551940d03ef4fb96f94 592 SUPERFAMILY SSF63882 192 362 2.88E-47 T 12-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 M634_09855 0b629089def66551940d03ef4fb96f94 592 Gene3D G3DSA:2.20.25.120 53 85 5.8E-57 T 12-10-2018 M634_09855 0b629089def66551940d03ef4fb96f94 592 SUPERFAMILY SSF63867 512 590 4.19E-23 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 M634_09855 0b629089def66551940d03ef4fb96f94 592 Pfam PF00994 Probable molybdopterin binding domain 366 503 1.4E-25 T 12-10-2018 IPR001453 MoaB/Mog domain M634_09855 0b629089def66551940d03ef4fb96f94 592 Gene3D G3DSA:2.40.340.10 513 583 1.4E-135 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 M634_09855 0b629089def66551940d03ef4fb96f94 592 Gene3D G3DSA:3.40.50.300 10 165 5.8E-57 T 12-10-2018 M634_09855 0b629089def66551940d03ef4fb96f94 592 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 9 167 7.9E-44 T 12-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 M634_09855 0b629089def66551940d03ef4fb96f94 592 Pfam PF03453 MoeA N-terminal region (domain I and II) 195 353 1.7E-38 T 12-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 M634_09855 0b629089def66551940d03ef4fb96f94 592 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 9 142 8.6E-49 T 12-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 M634_09855 0b629089def66551940d03ef4fb96f94 592 SUPERFAMILY SSF52540 7 169 2.79E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_09855 0b629089def66551940d03ef4fb96f94 592 SMART SM00852 366 503 6.7E-40 T 12-10-2018 IPR001453 MoaB/Mog domain M634_14565 b40bd6fc7ddc6f1f4182f8ad4753e1f3 257 SUPERFAMILY SSF51556 1 255 4.4E-77 T 12-10-2018 IPR032466 Metal-dependent hydrolase M634_14565 b40bd6fc7ddc6f1f4182f8ad4753e1f3 257 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 M634_14565 b40bd6fc7ddc6f1f4182f8ad4753e1f3 257 Gene3D G3DSA:3.20.20.140 1 256 1.5E-82 T 12-10-2018 M634_14565 b40bd6fc7ddc6f1f4182f8ad4753e1f3 257 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 M634_14565 b40bd6fc7ddc6f1f4182f8ad4753e1f3 257 PIRSF PIRSF005902 1 257 5.7E-67 T 12-10-2018 IPR001130 TatD family GO:0016788 M634_14565 b40bd6fc7ddc6f1f4182f8ad4753e1f3 257 Pfam PF01026 TatD related DNase 4 253 2.0E-66 T 12-10-2018 IPR001130 TatD family GO:0016788 M634_19710 f4c47ac7170f64f1a461d3c69bcff7fa 436 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 7 413 44.055 T 12-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 M634_19710 f4c47ac7170f64f1a461d3c69bcff7fa 436 PIRSF PIRSF000484 1 396 1.1E-65 T 12-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 M634_19710 f4c47ac7170f64f1a461d3c69bcff7fa 436 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 10 412 4.9E-156 T 12-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 M634_19710 f4c47ac7170f64f1a461d3c69bcff7fa 436 SUPERFAMILY SSF54675 8 145 5.0E-34 T 12-10-2018 M634_19710 f4c47ac7170f64f1a461d3c69bcff7fa 436 SUPERFAMILY SSF51690 129 409 6.87E-87 T 12-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 M634_19710 f4c47ac7170f64f1a461d3c69bcff7fa 436 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 178 412 1.0E-81 T 12-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 M634_19710 f4c47ac7170f64f1a461d3c69bcff7fa 436 Gene3D G3DSA:3.20.140.10 1 427 1.7E-164 T 12-10-2018 M634_15780 9e0cbc48814770876df44277bfde9efd 301 Pfam PF12802 MarR family 29 85 3.1E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M634_15780 9e0cbc48814770876df44277bfde9efd 301 Pfam PF00583 Acetyltransferase (GNAT) family 193 278 2.6E-14 T 12-10-2018 IPR000182 GNAT domain M634_15780 9e0cbc48814770876df44277bfde9efd 301 Gene3D G3DSA:3.40.630.30 144 301 1.5E-24 T 12-10-2018 M634_15780 9e0cbc48814770876df44277bfde9efd 301 SMART SM00347 22 121 3.5E-16 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M634_15780 9e0cbc48814770876df44277bfde9efd 301 PRINTS PR00598 Bacterial regulatory protein MarR family signature 62 77 4.1E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M634_15780 9e0cbc48814770876df44277bfde9efd 301 PRINTS PR00598 Bacterial regulatory protein MarR family signature 81 97 4.1E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M634_15780 9e0cbc48814770876df44277bfde9efd 301 PRINTS PR00598 Bacterial regulatory protein MarR family signature 45 61 4.1E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M634_15780 9e0cbc48814770876df44277bfde9efd 301 SUPERFAMILY SSF55729 144 301 7.03E-29 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_15780 9e0cbc48814770876df44277bfde9efd 301 SUPERFAMILY SSF46785 6 135 3.33E-26 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_15780 9e0cbc48814770876df44277bfde9efd 301 ProSitePatterns PS01117 MarR-type HTH domain signature. 60 94 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site M634_15780 9e0cbc48814770876df44277bfde9efd 301 Gene3D G3DSA:1.10.10.10 2 137 2.1E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_12590 379ba2c643bf8a3f3b4063f5bc8ccfc5 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_12590 379ba2c643bf8a3f3b4063f5bc8ccfc5 264 SMART SM00382 31 226 8.8E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_12590 379ba2c643bf8a3f3b4063f5bc8ccfc5 264 SUPERFAMILY SSF52540 2 231 3.62E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_12590 379ba2c643bf8a3f3b4063f5bc8ccfc5 264 Gene3D G3DSA:3.40.50.300 1 254 2.9E-53 T 12-10-2018 M634_12590 379ba2c643bf8a3f3b4063f5bc8ccfc5 264 Pfam PF00005 ABC transporter 22 177 5.3E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_04670 6e3345ae66870923d83a04c62186ec8f 325 Pfam PF00849 RNA pseudouridylate synthase 92 241 9.7E-30 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 M634_04670 6e3345ae66870923d83a04c62186ec8f 325 Pfam PF01479 S4 domain 18 65 1.3E-9 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_04670 6e3345ae66870923d83a04c62186ec8f 325 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 M634_04670 6e3345ae66870923d83a04c62186ec8f 325 SMART SM00363 18 83 2.8E-9 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_04670 6e3345ae66870923d83a04c62186ec8f 325 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 15 313 5.4E-105 T 12-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 M634_04670 6e3345ae66870923d83a04c62186ec8f 325 Gene3D G3DSA:3.10.290.10 2 76 2.9E-24 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 M634_04670 6e3345ae66870923d83a04c62186ec8f 325 Gene3D G3DSA:3.30.2350.10 85 316 9.8E-73 T 12-10-2018 M634_04670 6e3345ae66870923d83a04c62186ec8f 325 SUPERFAMILY SSF55120 77 317 6.58E-80 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 M634_04670 6e3345ae66870923d83a04c62186ec8f 325 SUPERFAMILY SSF55174 17 68 1.85E-11 T 12-10-2018 M634_13845 e312e78c74fde3b62706af6446334e71 591 Pfam PF01740 STAS domain 451 543 2.6E-16 T 12-10-2018 IPR002645 STAS domain M634_13845 e312e78c74fde3b62706af6446334e71 591 Gene3D G3DSA:3.30.750.24 439 558 1.0E-20 T 12-10-2018 IPR036513 STAS domain superfamily M634_13845 e312e78c74fde3b62706af6446334e71 591 Pfam PF00916 Sulfate permease family 28 391 2.0E-81 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 M634_13845 e312e78c74fde3b62706af6446334e71 591 SUPERFAMILY SSF52091 450 540 2.55E-13 T 12-10-2018 IPR036513 STAS domain superfamily M634_02490 e1e5a64146141fa7e03c69e5c0775509 544 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 539 56.65 T 12-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 M634_02490 e1e5a64146141fa7e03c69e5c0775509 544 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 445 4.4E-176 T 12-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 M634_02490 e1e5a64146141fa7e03c69e5c0775509 544 SUPERFAMILY SSF56112 94 436 1.3E-46 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily M634_02490 e1e5a64146141fa7e03c69e5c0775509 544 Pfam PF03109 ABC1 family 112 230 3.7E-36 T 12-10-2018 IPR004147 UbiB domain M634_03665 9a7f9b98791e2e920133bdeff0c23c7d 332 Gene3D G3DSA:3.40.718.10 1 332 5.8E-120 T 12-10-2018 M634_03665 9a7f9b98791e2e920133bdeff0c23c7d 332 SUPERFAMILY SSF53659 6 330 4.32E-109 T 12-10-2018 M634_03665 9a7f9b98791e2e920133bdeff0c23c7d 332 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 6 331 36.214 T 12-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 M634_03665 9a7f9b98791e2e920133bdeff0c23c7d 332 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 35 324 9.4E-105 T 12-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 M634_03665 9a7f9b98791e2e920133bdeff0c23c7d 332 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 8 327 1.9E-125 T 12-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 M634_19695 60453e6c3fb07b7ffea2851fec6aeae9 155 Gene3D G3DSA:1.25.40.20 19 155 1.7E-25 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily M634_19695 60453e6c3fb07b7ffea2851fec6aeae9 155 Pfam PF12796 Ankyrin repeats (3 copies) 40 129 1.0E-11 T 12-10-2018 IPR020683 Ankyrin repeat-containing domain M634_19695 60453e6c3fb07b7ffea2851fec6aeae9 155 SUPERFAMILY SSF48403 35 153 5.44E-26 T 12-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily M634_19695 60453e6c3fb07b7ffea2851fec6aeae9 155 SMART SM00248 66 95 0.0012 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 M634_19695 60453e6c3fb07b7ffea2851fec6aeae9 155 SMART SM00248 99 128 390.0 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 M634_19695 60453e6c3fb07b7ffea2851fec6aeae9 155 SMART SM00248 33 62 1900.0 T 12-10-2018 IPR002110 Ankyrin repeat GO:0005515 M634_18570 a226499abcd1cc0fcb7c03ef07a4208f 496 Pfam PF07690 Major Facilitator Superfamily 17 408 2.2E-56 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M634_18570 a226499abcd1cc0fcb7c03ef07a4208f 496 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 13 491 6.7E-109 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 M634_18570 a226499abcd1cc0fcb7c03ef07a4208f 496 SUPERFAMILY SSF103473 10 416 1.83E-59 T 12-10-2018 IPR036259 MFS transporter superfamily M634_18570 a226499abcd1cc0fcb7c03ef07a4208f 496 Gene3D G3DSA:1.20.1720.10 14 207 1.8E-45 T 12-10-2018 M634_18570 a226499abcd1cc0fcb7c03ef07a4208f 496 Gene3D G3DSA:1.20.1250.20 259 428 7.8E-14 T 12-10-2018 M634_23450 436c4a08d1eb95800eb18c0fccec4700 124 SUPERFAMILY SSF46955 3 111 3.55E-25 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily M634_23450 436c4a08d1eb95800eb18c0fccec4700 124 Pfam PF13411 MerR HTH family regulatory protein 4 69 3.6E-16 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M634_23450 436c4a08d1eb95800eb18c0fccec4700 124 SMART SM00422 4 71 6.0E-20 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M634_23450 436c4a08d1eb95800eb18c0fccec4700 124 Gene3D G3DSA:1.10.1660.10 1 124 5.8E-26 T 12-10-2018 M634_19045 58a5d746ea819ddff2f827e60985914d 336 Pfam PF16868 NMT1-like family 32 326 1.5E-110 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family M634_19045 58a5d746ea819ddff2f827e60985914d 336 SUPERFAMILY SSF53850 29 327 9.12E-65 T 12-10-2018 M634_19045 58a5d746ea819ddff2f827e60985914d 336 Gene3D G3DSA:3.40.190.10 32 326 2.0E-89 T 12-10-2018 M634_19045 58a5d746ea819ddff2f827e60985914d 336 Gene3D G3DSA:3.40.190.10 120 263 2.0E-89 T 12-10-2018 M634_19045 58a5d746ea819ddff2f827e60985914d 336 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 3 326 8.0E-110 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family M634_20845 e41388dc88d5d08ec5c3b2d72778ab48 220 Gene3D G3DSA:1.10.760.10 21 130 3.0E-32 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_20845 e41388dc88d5d08ec5c3b2d72778ab48 220 PRINTS PR00604 Class IA and IB cytochrome C signature 85 101 9.9E-9 T 12-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_20845 e41388dc88d5d08ec5c3b2d72778ab48 220 PRINTS PR00604 Class IA and IB cytochrome C signature 42 49 9.9E-9 T 12-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_20845 e41388dc88d5d08ec5c3b2d72778ab48 220 PRINTS PR00604 Class IA and IB cytochrome C signature 121 129 9.9E-9 T 12-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_20845 e41388dc88d5d08ec5c3b2d72778ab48 220 PRINTS PR00604 Class IA and IB cytochrome C signature 55 70 9.9E-9 T 12-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_20845 e41388dc88d5d08ec5c3b2d72778ab48 220 PRINTS PR00604 Class IA and IB cytochrome C signature 104 114 9.9E-9 T 12-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_20845 e41388dc88d5d08ec5c3b2d72778ab48 220 PRINTS PR00604 Class IA and IB cytochrome C signature 71 81 9.9E-9 T 12-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_20845 e41388dc88d5d08ec5c3b2d72778ab48 220 SUPERFAMILY SSF46626 31 138 2.48E-26 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_20845 e41388dc88d5d08ec5c3b2d72778ab48 220 SUPERFAMILY SSF46626 159 219 2.41E-10 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_20845 e41388dc88d5d08ec5c3b2d72778ab48 220 Pfam PF00034 Cytochrome c 34 130 1.3E-10 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_20845 e41388dc88d5d08ec5c3b2d72778ab48 220 Gene3D G3DSA:1.10.760.10 158 218 4.3E-9 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_23170 e5a2aa3bd78b4e7c55933b84c4e61922 204 SUPERFAMILY SSF47616 72 203 1.1E-23 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily M634_23170 e5a2aa3bd78b4e7c55933b84c4e61922 204 SUPERFAMILY SSF52833 1 89 1.21E-19 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M634_23170 e5a2aa3bd78b4e7c55933b84c4e61922 204 Gene3D G3DSA:3.40.30.10 1 77 1.2E-21 T 12-10-2018 M634_23170 e5a2aa3bd78b4e7c55933b84c4e61922 204 Pfam PF00043 Glutathione S-transferase, C-terminal domain 132 200 4.1E-8 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal M634_23170 e5a2aa3bd78b4e7c55933b84c4e61922 204 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 79 2.8E-15 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 M634_23170 e5a2aa3bd78b4e7c55933b84c4e61922 204 Gene3D G3DSA:1.20.1050.10 83 199 2.2E-30 T 12-10-2018 M634_00700 7fa0611dbdedd6c8533eec8efbe97614 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 7.3E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M634_00700 7fa0611dbdedd6c8533eec8efbe97614 211 Pfam PF13972 Bacterial transcriptional repressor 57 199 3.2E-44 T 12-10-2018 IPR025722 Bacterial transcriptional repressor TetR M634_00700 7fa0611dbdedd6c8533eec8efbe97614 211 Gene3D G3DSA:1.10.357.10 1 210 9.2E-65 T 12-10-2018 M634_00700 7fa0611dbdedd6c8533eec8efbe97614 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 4.1E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M634_00700 7fa0611dbdedd6c8533eec8efbe97614 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 4.1E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M634_00700 7fa0611dbdedd6c8533eec8efbe97614 211 SUPERFAMILY SSF46689 2 71 1.31E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_09025 657c618e741f2a20b1fa444466dd11d6 82 Pfam PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF 12 82 2.8E-25 T 12-10-2018 IPR021123 Type III secretion, needle-protein-like GO:0009405|GO:0015031 M634_09025 657c618e741f2a20b1fa444466dd11d6 82 TIGRFAM TIGR02105 III_needle: type III secretion apparatus needle protein 11 82 3.0E-22 T 12-10-2018 IPR011841 Type III secretion system, needle protein GO:0008565|GO:0009405|GO:0015031 M634_09025 657c618e741f2a20b1fa444466dd11d6 82 SUPERFAMILY SSF140129 2 78 2.35E-23 T 12-10-2018 IPR037203 Type III secretion, needle-protein-like superfamily GO:0009405|GO:0015031 M634_09025 657c618e741f2a20b1fa444466dd11d6 82 Gene3D G3DSA:1.20.58.90 1 82 8.2E-13 T 12-10-2018 M634_15495 e1d22c5b045109237ef55e3790801ad1 237 SUPERFAMILY SSF51419 1 228 6.94E-83 T 12-10-2018 IPR029066 PLP-binding barrel M634_15495 e1d22c5b045109237ef55e3790801ad1 237 PIRSF PIRSF004848 1 236 1.8E-80 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 M634_15495 e1d22c5b045109237ef55e3790801ad1 237 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 80 94 - T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 M634_15495 e1d22c5b045109237ef55e3790801ad1 237 Gene3D G3DSA:3.20.20.10 1 236 5.3E-89 T 12-10-2018 IPR029066 PLP-binding barrel M634_15495 e1d22c5b045109237ef55e3790801ad1 237 Pfam PF01168 Alanine racemase, N-terminal domain 9 230 1.7E-37 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M634_15495 e1d22c5b045109237ef55e3790801ad1 237 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 229 35.019 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 M634_15495 e1d22c5b045109237ef55e3790801ad1 237 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 230 2.9E-91 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 M634_03285 2d175bb8a55ff69ba74ee7ff553af54c 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 12 197 2.4E-76 T 12-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03285 2d175bb8a55ff69ba74ee7ff553af54c 200 Gene3D G3DSA:3.40.1370.10 5 200 4.0E-70 T 12-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 M634_03285 2d175bb8a55ff69ba74ee7ff553af54c 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 200 33.872 T 12-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03285 2d175bb8a55ff69ba74ee7ff553af54c 200 SUPERFAMILY SSF52166 9 199 4.06E-73 T 12-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 M634_03285 2d175bb8a55ff69ba74ee7ff553af54c 200 Pfam PF00573 Ribosomal protein L4/L1 family 12 197 1.4E-65 T 12-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 M634_03795 8a3942f44f7fa1e41cd6aacce351eca2 211 SMART SM01120 32 206 1.0E-78 T 12-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 M634_03795 8a3942f44f7fa1e41cd6aacce351eca2 211 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 9 205 1.1E-78 T 12-10-2018 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 KEGG: 00561+2.7.1.121 M634_03795 8a3942f44f7fa1e41cd6aacce351eca2 211 SUPERFAMILY SSF101473 2 207 4.71E-58 T 12-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 M634_03795 8a3942f44f7fa1e41cd6aacce351eca2 211 Gene3D G3DSA:1.25.40.340 1 209 1.9E-68 T 12-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 M634_03795 8a3942f44f7fa1e41cd6aacce351eca2 211 Pfam PF02734 DAK2 domain 33 205 1.2E-54 T 12-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 M634_03950 82b2ecb72009aa2f24cf802a13d14316 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.588 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03950 82b2ecb72009aa2f24cf802a13d14316 71 Pfam PF01165 Ribosomal protein S21 4 56 4.3E-23 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03950 82b2ecb72009aa2f24cf802a13d14316 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 12-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_03950 82b2ecb72009aa2f24cf802a13d14316 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 44 2.0E-10 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03950 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.6E-16 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03950 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.6E-16 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03950 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.6E-16 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03950 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.6E-16 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03950 82b2ecb72009aa2f24cf802a13d14316 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 7.2E-25 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03950 82b2ecb72009aa2f24cf802a13d14316 71 Gene3D G3DSA:1.20.5.1150 16 54 1.4E-21 T 12-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_09465 0cafcb1f2facdf6640f00668042accbf 80 Pfam PF05768 Glutaredoxin-like domain (DUF836) 2 72 5.7E-20 T 12-10-2018 IPR008554 Glutaredoxin-like M634_09465 0cafcb1f2facdf6640f00668042accbf 80 Gene3D G3DSA:3.40.30.10 1 80 3.3E-21 T 12-10-2018 M634_09465 0cafcb1f2facdf6640f00668042accbf 80 SUPERFAMILY SSF52833 1 74 1.71E-14 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M634_01235 0dfeaa01c9a16513eb6b2e55f8032998 213 Gene3D G3DSA:1.10.357.10 56 210 1.1E-36 T 12-10-2018 M634_01235 0dfeaa01c9a16513eb6b2e55f8032998 213 SUPERFAMILY SSF46689 5 80 3.64E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_01235 0dfeaa01c9a16513eb6b2e55f8032998 213 Gene3D G3DSA:1.10.10.60 4 55 1.4E-23 T 12-10-2018 M634_01235 0dfeaa01c9a16513eb6b2e55f8032998 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 61 1.7E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M634_01235 0dfeaa01c9a16513eb6b2e55f8032998 213 ProSitePatterns PS01081 TetR-type HTH domain signature. 31 61 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site M634_08630 6308cecff9451e89478291c45471de5e 536 PIRSF PIRSF002741 1 536 5.2E-104 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 M634_08630 6308cecff9451e89478291c45471de5e 536 Gene3D G3DSA:3.90.76.10 68 191 2.9E-167 T 12-10-2018 M634_08630 6308cecff9451e89478291c45471de5e 536 SUPERFAMILY SSF53850 33 529 3.26E-128 T 12-10-2018 M634_08630 6308cecff9451e89478291c45471de5e 536 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 458 4.3E-87 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain M634_08630 6308cecff9451e89478291c45471de5e 536 Gene3D G3DSA:3.10.105.10 294 505 2.9E-167 T 12-10-2018 M634_08630 6308cecff9451e89478291c45471de5e 536 Gene3D G3DSA:3.40.190.10 39 517 2.9E-167 T 12-10-2018 M634_11755 307717905dd36c654b83a6ceb8859fb7 428 PIRSF PIRSF006066 1 427 1.2E-74 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 M634_11755 307717905dd36c654b83a6ceb8859fb7 428 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 423 5.9E-100 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit M634_11755 307717905dd36c654b83a6ceb8859fb7 428 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 424 7.2E-106 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 M634_09100 0b897fec26ebee20487f960785fc3aac 88 PIRSF PIRSF004669 1 88 5.4E-26 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 M634_09100 0b897fec26ebee20487f960785fc3aac 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 8.7E-25 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 M634_09100 0b897fec26ebee20487f960785fc3aac 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 8.7E-25 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 M634_09100 0b897fec26ebee20487f960785fc3aac 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 8.7E-25 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 M634_09100 0b897fec26ebee20487f960785fc3aac 88 Pfam PF01313 Bacterial export proteins, family 3 6 77 3.1E-24 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 M634_09100 0b897fec26ebee20487f960785fc3aac 88 TIGRFAM TIGR01403 fliQ_rel_III: type III secretion protein, HrpO family 5 84 1.8E-31 T 12-10-2018 IPR006306 Type III secretion protein HrpO GO:0009306|GO:0016021 M634_12895 25f5a6d4a6c18e755908cd8c75d8c1f0 332 Pfam PF04245 37-kD nucleoid-associated bacterial protein 9 326 7.0E-100 T 12-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 M634_12895 25f5a6d4a6c18e755908cd8c75d8c1f0 332 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 332 46.634 T 12-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 M634_16800 060df81530300e55504ae858bf5506f3 712 Gene3D G3DSA:2.40.170.20 166 712 4.7E-84 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily M634_16800 060df81530300e55504ae858bf5506f3 712 SUPERFAMILY SSF56935 21 712 1.37E-114 T 12-10-2018 M634_16800 060df81530300e55504ae858bf5506f3 712 Pfam PF00593 TonB dependent receptor 218 710 2.2E-53 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel M634_16800 060df81530300e55504ae858bf5506f3 712 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 30 712 1.2E-118 T 12-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 M634_16800 060df81530300e55504ae858bf5506f3 712 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 28 712 1.3E-128 T 12-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 M634_16800 060df81530300e55504ae858bf5506f3 712 Gene3D G3DSA:2.170.130.10 28 155 2.7E-30 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily M634_16800 060df81530300e55504ae858bf5506f3 712 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 151 4.2E-25 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain M634_07865 f8d6cd85c1b778ec2718ba206152b6b8 509 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 280 295 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M634_07865 f8d6cd85c1b778ec2718ba206152b6b8 509 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 218 231 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M634_07865 f8d6cd85c1b778ec2718ba206152b6b8 509 SMART SM00065 21 170 4.7E-8 T 12-10-2018 IPR003018 GAF domain GO:0005515 M634_07865 f8d6cd85c1b778ec2718ba206152b6b8 509 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 471 488 9.0E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M634_07865 f8d6cd85c1b778ec2718ba206152b6b8 509 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 488 508 9.0E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M634_07865 f8d6cd85c1b778ec2718ba206152b6b8 509 SMART SM00382 214 358 4.2E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_07865 f8d6cd85c1b778ec2718ba206152b6b8 509 SUPERFAMILY SSF55781 7 163 6.76E-18 T 12-10-2018 M634_07865 f8d6cd85c1b778ec2718ba206152b6b8 509 Gene3D G3DSA:1.10.10.60 448 509 5.2E-10 T 12-10-2018 M634_07865 f8d6cd85c1b778ec2718ba206152b6b8 509 Pfam PF00158 Sigma-54 interaction domain 195 361 1.6E-69 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 M634_07865 f8d6cd85c1b778ec2718ba206152b6b8 509 SUPERFAMILY SSF52540 193 437 4.43E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_07865 f8d6cd85c1b778ec2718ba206152b6b8 509 Gene3D G3DSA:3.40.50.300 180 364 3.7E-64 T 12-10-2018 M634_07865 f8d6cd85c1b778ec2718ba206152b6b8 509 Gene3D G3DSA:3.30.450.40 7 175 4.7E-15 T 12-10-2018 IPR029016 GAF-like domain superfamily M634_07865 f8d6cd85c1b778ec2718ba206152b6b8 509 SUPERFAMILY SSF46689 459 507 9.41E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_07865 f8d6cd85c1b778ec2718ba206152b6b8 509 Pfam PF02954 Bacterial regulatory protein, Fis family 469 500 4.8E-6 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M634_07865 f8d6cd85c1b778ec2718ba206152b6b8 509 Gene3D G3DSA:1.10.8.60 365 430 2.7E-15 T 12-10-2018 M634_11055 6f4e54466285d624ba348c13228079f7 408 SUPERFAMILY SSF56281 125 337 3.63E-9 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M634_11055 6f4e54466285d624ba348c13228079f7 408 Gene3D G3DSA:3.60.15.10 125 407 1.4E-19 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M634_09260 f2824dd461a07b6e20c762d44f900bfa 487 Gene3D G3DSA:3.90.79.10 29 121 3.2E-14 T 12-10-2018 M634_09260 f2824dd461a07b6e20c762d44f900bfa 487 Pfam PF01569 PAP2 superfamily 246 358 4.8E-7 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase M634_09260 f2824dd461a07b6e20c762d44f900bfa 487 SUPERFAMILY SSF48317 213 359 1.31E-8 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily M634_09260 f2824dd461a07b6e20c762d44f900bfa 487 ProSitePatterns PS00893 Nudix box signature. 63 84 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 M634_09260 f2824dd461a07b6e20c762d44f900bfa 487 SUPERFAMILY SSF55811 36 173 1.62E-18 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 M634_09260 f2824dd461a07b6e20c762d44f900bfa 487 Pfam PF00293 NUDIX domain 37 107 3.6E-10 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 M634_11665 093634e86e9334c566acda026f57acab 141 SMART SM00530 81 138 0.0014 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 M634_11665 093634e86e9334c566acda026f57acab 141 SUPERFAMILY SSF47413 80 137 5.35E-8 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M634_11665 093634e86e9334c566acda026f57acab 141 Gene3D G3DSA:1.10.260.40 81 140 8.3E-10 T 12-10-2018 M634_11665 093634e86e9334c566acda026f57acab 141 Pfam PF13560 Helix-turn-helix domain 81 135 1.1E-6 T 12-10-2018 M634_06310 5b4c02d0ad011f370d779760accd755d 577 SMART SM00836 461 577 7.9E-43 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 M634_06310 5b4c02d0ad011f370d779760accd755d 577 SUPERFAMILY SSF52374 110 454 1.79E-93 T 12-10-2018 M634_06310 5b4c02d0ad011f370d779760accd755d 577 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 577 2.0E-199 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 M634_06310 5b4c02d0ad011f370d779760accd755d 577 Pfam PF05746 DALR anticodon binding domain 461 577 4.1E-37 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 M634_06310 5b4c02d0ad011f370d779760accd755d 577 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 577 28.114 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 M634_06310 5b4c02d0ad011f370d779760accd755d 577 Gene3D G3DSA:1.10.730.10 455 577 1.8E-36 T 12-10-2018 M634_06310 5b4c02d0ad011f370d779760accd755d 577 SMART SM01016 5 87 2.0E-28 T 12-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 M634_06310 5b4c02d0ad011f370d779760accd755d 577 Pfam PF00750 tRNA synthetases class I (R) 98 447 7.4E-162 T 12-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 M634_06310 5b4c02d0ad011f370d779760accd755d 577 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 M634_06310 5b4c02d0ad011f370d779760accd755d 577 Gene3D G3DSA:3.30.1360.70 1 106 1.7E-33 T 12-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 M634_06310 5b4c02d0ad011f370d779760accd755d 577 SUPERFAMILY SSF55190 2 96 3.66E-22 T 12-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 M634_06310 5b4c02d0ad011f370d779760accd755d 577 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 2.8E-20 T 12-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 M634_06310 5b4c02d0ad011f370d779760accd755d 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 3.6E-25 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 M634_06310 5b4c02d0ad011f370d779760accd755d 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 3.6E-25 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 M634_06310 5b4c02d0ad011f370d779760accd755d 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 3.6E-25 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 M634_06310 5b4c02d0ad011f370d779760accd755d 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 304 325 3.6E-25 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 M634_06310 5b4c02d0ad011f370d779760accd755d 577 SUPERFAMILY SSF47323 455 577 2.68E-36 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 M634_06310 5b4c02d0ad011f370d779760accd755d 577 Gene3D G3DSA:3.40.50.620 108 454 3.3E-108 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M634_06645 a9fc6aa30351055e81e661c3cc089aac 404 SUPERFAMILY SSF53383 5 400 2.42E-95 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_06645 a9fc6aa30351055e81e661c3cc089aac 404 Pfam PF00155 Aminotransferase class I and II 61 391 2.0E-47 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 M634_06645 a9fc6aa30351055e81e661c3cc089aac 404 Gene3D G3DSA:3.90.1150.10 21 398 2.6E-145 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M634_06645 a9fc6aa30351055e81e661c3cc089aac 404 Gene3D G3DSA:3.40.640.10 53 294 2.6E-145 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_19800 f31d046fc18b782ca0d7c04fe43aba58 293 SUPERFAMILY SSF53850 89 292 1.09E-29 T 12-10-2018 M634_19800 f31d046fc18b782ca0d7c04fe43aba58 293 Gene3D G3DSA:3.40.190.290 93 293 2.4E-24 T 12-10-2018 M634_19800 f31d046fc18b782ca0d7c04fe43aba58 293 Pfam PF03466 LysR substrate binding domain 89 291 3.8E-28 T 12-10-2018 IPR005119 LysR, substrate-binding M634_19800 f31d046fc18b782ca0d7c04fe43aba58 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.7E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_19800 f31d046fc18b782ca0d7c04fe43aba58 293 SUPERFAMILY SSF46785 2 109 5.44E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_19800 f31d046fc18b782ca0d7c04fe43aba58 293 Gene3D G3DSA:1.10.10.10 1 92 1.7E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_23370 82c103aa4264aadfc233838cdfacff3c 461 Gene3D G3DSA:3.30.465.10 109 447 1.8E-122 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 M634_23370 82c103aa4264aadfc233838cdfacff3c 461 Pfam PF08031 Berberine and berberine like 415 459 6.2E-16 T 12-10-2018 IPR012951 Berberine/berberine-like GO:0016491|GO:0050660|GO:0055114 M634_23370 82c103aa4264aadfc233838cdfacff3c 461 Gene3D G3DSA:3.40.462.20 209 420 1.8E-122 T 12-10-2018 M634_23370 82c103aa4264aadfc233838cdfacff3c 461 SUPERFAMILY SSF56176 16 209 4.49E-59 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 M634_23370 82c103aa4264aadfc233838cdfacff3c 461 ProSitePatterns PS00862 Oxygen oxidoreductases covalent FAD-binding site. 43 76 - T 12-10-2018 IPR006093 Oxygen oxidoreductase covalent FAD-binding site GO:0016491|GO:0055114 M634_23370 82c103aa4264aadfc233838cdfacff3c 461 Pfam PF01565 FAD binding domain 43 175 1.4E-32 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 M634_23370 82c103aa4264aadfc233838cdfacff3c 461 SUPERFAMILY SSF55103 175 452 5.01E-5 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 M634_23370 82c103aa4264aadfc233838cdfacff3c 461 Gene3D G3DSA:3.30.43.10 18 96 4.6E-30 T 12-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 M634_14460 02ff825817d6e6faca5b2826f685d3c8 431 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 27 69 4.0E-9 T 12-10-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal M634_17020 6cfe937b0ea9af71824be0ad0f6cab41 468 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 12 39 1.7E-4 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal M634_17020 6cfe937b0ea9af71824be0ad0f6cab41 468 Gene3D G3DSA:3.40.640.10 85 355 4.0E-69 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_17020 6cfe937b0ea9af71824be0ad0f6cab41 468 SUPERFAMILY SSF53383 62 464 6.39E-65 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_17020 6cfe937b0ea9af71824be0ad0f6cab41 468 Gene3D G3DSA:3.90.1150.10 72 457 4.0E-69 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M634_17020 6cfe937b0ea9af71824be0ad0f6cab41 468 Pfam PF00266 Aminotransferase class-V 123 407 3.6E-31 T 12-10-2018 IPR000192 Aminotransferase class V domain M634_17020 6cfe937b0ea9af71824be0ad0f6cab41 468 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 269 288 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site M634_05340 ec4dd841bf80a7e915d1bbc8c9acd1ac 321 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 2 320 26.781 T 12-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 M634_05340 ec4dd841bf80a7e915d1bbc8c9acd1ac 321 Pfam PF02769 AIR synthase related protein, C-terminal domain 149 301 6.2E-9 T 12-10-2018 IPR010918 PurM-like, C-terminal domain M634_05340 ec4dd841bf80a7e915d1bbc8c9acd1ac 321 PIRSF PIRSF005303 1 320 7.4E-82 T 12-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 M634_05340 ec4dd841bf80a7e915d1bbc8c9acd1ac 321 Gene3D G3DSA:3.30.1330.10 1 143 7.3E-42 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily M634_05340 ec4dd841bf80a7e915d1bbc8c9acd1ac 321 SUPERFAMILY SSF55326 3 137 4.19E-33 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily M634_05340 ec4dd841bf80a7e915d1bbc8c9acd1ac 321 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 320 1.4E-101 T 12-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 M634_05340 ec4dd841bf80a7e915d1bbc8c9acd1ac 321 Gene3D G3DSA:3.90.650.10 144 320 4.2E-48 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily M634_05340 ec4dd841bf80a7e915d1bbc8c9acd1ac 321 Pfam PF00586 AIR synthase related protein, N-terminal domain 28 137 6.5E-21 T 12-10-2018 IPR016188 PurM-like, N-terminal domain M634_05340 ec4dd841bf80a7e915d1bbc8c9acd1ac 321 SUPERFAMILY SSF56042 141 307 1.32E-33 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily M634_05770 30b5b3e31517701c813c5d01ca8cc9be 46 Pfam PF11346 Protein of unknown function (DUF3149) 4 43 1.7E-16 T 12-10-2018 IPR021494 Protein of unknown function DUF3149 M634_09235 86f7974b9f087400bff6d6774755c7a7 863 Pfam PF00694 Aconitase C-terminal domain 660 790 3.5E-30 T 12-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 M634_09235 86f7974b9f087400bff6d6774755c7a7 863 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 6 862 0.0 T 12-10-2018 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 M634_09235 86f7974b9f087400bff6d6774755c7a7 863 SUPERFAMILY SSF52016 602 860 1.39E-67 T 12-10-2018 M634_09235 86f7974b9f087400bff6d6774755c7a7 863 Gene3D G3DSA:3.30.499.10 361 565 2.7E-78 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 M634_09235 86f7974b9f087400bff6d6774755c7a7 863 Pfam PF00330 Aconitase family (aconitate hydratase) 74 537 1.0E-146 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M634_09235 86f7974b9f087400bff6d6774755c7a7 863 SUPERFAMILY SSF53732 27 594 1.29E-188 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 M634_09235 86f7974b9f087400bff6d6774755c7a7 863 Gene3D G3DSA:1.10.1440.20 566 622 1.3E-9 T 12-10-2018 M634_09235 86f7974b9f087400bff6d6774755c7a7 863 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 20 859 1.3E-292 T 12-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 M634_09235 86f7974b9f087400bff6d6774755c7a7 863 Gene3D G3DSA:3.30.499.20 9 360 3.2E-132 T 12-10-2018 M634_09235 86f7974b9f087400bff6d6774755c7a7 863 Gene3D G3DSA:3.20.19.10 623 861 2.0E-83 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 M634_09235 86f7974b9f087400bff6d6774755c7a7 863 PRINTS PR00415 Aconitase family signature 209 224 2.1E-26 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M634_09235 86f7974b9f087400bff6d6774755c7a7 863 PRINTS PR00415 Aconitase family signature 271 284 2.1E-26 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M634_09235 86f7974b9f087400bff6d6774755c7a7 863 PRINTS PR00415 Aconitase family signature 468 481 2.1E-26 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M634_09235 86f7974b9f087400bff6d6774755c7a7 863 PRINTS PR00415 Aconitase family signature 142 155 2.1E-26 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M634_09235 86f7974b9f087400bff6d6774755c7a7 863 PRINTS PR00415 Aconitase family signature 166 174 2.1E-26 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M634_09235 86f7974b9f087400bff6d6774755c7a7 863 PRINTS PR00415 Aconitase family signature 195 208 2.1E-26 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M634_09235 86f7974b9f087400bff6d6774755c7a7 863 PRINTS PR00415 Aconitase family signature 364 378 2.1E-26 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M634_09235 86f7974b9f087400bff6d6774755c7a7 863 PRINTS PR00415 Aconitase family signature 285 298 2.1E-26 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M634_09235 86f7974b9f087400bff6d6774755c7a7 863 PRINTS PR00415 Aconitase family signature 406 417 2.1E-26 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M634_03005 69fa603c9d68bf91f37dce5604c25c9b 288 SUPERFAMILY SSF53448 1 287 2.93E-92 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M634_03005 69fa603c9d68bf91f37dce5604c25c9b 288 Pfam PF00483 Nucleotidyl transferase 2 238 3.5E-72 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 M634_03005 69fa603c9d68bf91f37dce5604c25c9b 288 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 1.8E-157 T 12-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 M634_03005 69fa603c9d68bf91f37dce5604c25c9b 288 Gene3D G3DSA:3.90.550.10 1 288 4.1E-85 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M634_02480 6f893c82d99df8de1eb984497c1bac53 259 SUPERFAMILY SSF53335 27 257 4.18E-53 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_02480 6f893c82d99df8de1eb984497c1bac53 259 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 166 180 - T 12-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 M634_02480 6f893c82d99df8de1eb984497c1bac53 259 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 44 59 - T 12-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 M634_02480 6f893c82d99df8de1eb984497c1bac53 259 Gene3D G3DSA:3.40.50.150 39 259 2.7E-75 T 12-10-2018 M634_02480 6f893c82d99df8de1eb984497c1bac53 259 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 24 258 38.455 T 12-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 M634_02480 6f893c82d99df8de1eb984497c1bac53 259 Pfam PF01209 ubiE/COQ5 methyltransferase family 25 258 3.4E-103 T 12-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 M634_02480 6f893c82d99df8de1eb984497c1bac53 259 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 33 258 7.7E-83 T 12-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 M634_17140 c68c75c7c57833737257987491c93f88 444 Gene3D G3DSA:3.40.50.2300 1 118 2.3E-12 T 12-10-2018 M634_17140 c68c75c7c57833737257987491c93f88 444 Pfam PF02954 Bacterial regulatory protein, Fis family 391 427 2.8E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M634_17140 c68c75c7c57833737257987491c93f88 444 SMART SM00382 146 289 3.3E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_17140 c68c75c7c57833737257987491c93f88 444 Gene3D G3DSA:1.10.10.60 377 437 3.6E-11 T 12-10-2018 M634_17140 c68c75c7c57833737257987491c93f88 444 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 212 227 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M634_17140 c68c75c7c57833737257987491c93f88 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 336 345 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site M634_17140 c68c75c7c57833737257987491c93f88 444 Gene3D G3DSA:3.40.50.300 119 296 1.7E-66 T 12-10-2018 M634_17140 c68c75c7c57833737257987491c93f88 444 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 150 163 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M634_17140 c68c75c7c57833737257987491c93f88 444 SUPERFAMILY SSF46689 336 427 7.17E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_17140 c68c75c7c57833737257987491c93f88 444 Pfam PF00158 Sigma-54 interaction domain 127 292 2.0E-70 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 M634_17140 c68c75c7c57833737257987491c93f88 444 Gene3D G3DSA:1.10.8.60 297 372 3.5E-23 T 12-10-2018 M634_17140 c68c75c7c57833737257987491c93f88 444 SUPERFAMILY SSF52172 2 171 1.29E-18 T 12-10-2018 IPR011006 CheY-like superfamily M634_17140 c68c75c7c57833737257987491c93f88 444 SUPERFAMILY SSF52540 130 365 1.1E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_18425 61b2b78eb61bdda51cab037b1c421923 196 SUPERFAMILY SSF46689 3 71 1.31E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_18425 61b2b78eb61bdda51cab037b1c421923 196 Gene3D G3DSA:1.10.357.10 49 194 2.1E-21 T 12-10-2018 M634_18425 61b2b78eb61bdda51cab037b1c421923 196 Gene3D G3DSA:1.10.10.60 1 47 2.0E-20 T 12-10-2018 M634_18425 61b2b78eb61bdda51cab037b1c421923 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 5.5E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M634_18425 61b2b78eb61bdda51cab037b1c421923 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 5.5E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M634_18425 61b2b78eb61bdda51cab037b1c421923 196 SUPERFAMILY SSF48498 81 193 2.79E-19 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily M634_18425 61b2b78eb61bdda51cab037b1c421923 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 53 2.4E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M634_21435 a2459d045cd0dd5c095fbf91640d448b 301 Gene3D G3DSA:1.20.1530.10 147 297 2.3E-46 T 12-10-2018 IPR023171 Na/H antiporter domain superfamily M634_21435 a2459d045cd0dd5c095fbf91640d448b 301 Gene3D G3DSA:1.20.1530.10 14 139 5.9E-25 T 12-10-2018 IPR023171 Na/H antiporter domain superfamily M634_21435 a2459d045cd0dd5c095fbf91640d448b 301 Pfam PF06965 Na+/H+ antiporter 1 18 289 4.9E-74 T 12-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 M634_01395 024911ffb4e994f5cf50fc0f771bd50f 274 SUPERFAMILY SSF56784 12 273 1.76E-67 T 12-10-2018 IPR036412 HAD-like superfamily M634_01395 024911ffb4e994f5cf50fc0f771bd50f 274 Gene3D G3DSA:3.40.50.1000 14 265 2.8E-74 T 12-10-2018 IPR023214 HAD superfamily M634_01395 024911ffb4e994f5cf50fc0f771bd50f 274 ProSitePatterns PS01228 Hypothetical cof family signature 1. 13 24 - T 12-10-2018 M634_01395 024911ffb4e994f5cf50fc0f771bd50f 274 Gene3D G3DSA:3.30.1240.10 91 195 2.8E-74 T 12-10-2018 M634_01395 024911ffb4e994f5cf50fc0f771bd50f 274 Pfam PF08282 haloacid dehalogenase-like hydrolase 14 269 8.5E-69 T 12-10-2018 M634_01395 024911ffb4e994f5cf50fc0f771bd50f 274 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 13 240 1.2E-34 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 M634_01395 024911ffb4e994f5cf50fc0f771bd50f 274 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 13 269 3.1E-61 T 12-10-2018 IPR000150 Cof family GO:0016787 M634_01395 024911ffb4e994f5cf50fc0f771bd50f 274 ProSitePatterns PS01229 Hypothetical cof family signature 2. 221 243 - T 12-10-2018 M634_06095 185a30cb254c958632975f588cf15d2c 181 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 2 168 2.9E-28 T 12-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 M634_06095 185a30cb254c958632975f588cf15d2c 181 Gene3D G3DSA:3.60.21.10 1 181 9.2E-62 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like M634_06095 185a30cb254c958632975f588cf15d2c 181 SUPERFAMILY SSF56300 2 162 9.43E-38 T 12-10-2018 M634_06095 185a30cb254c958632975f588cf15d2c 181 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 2 162 5.8E-23 T 12-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 M634_12940 9a4893f58a194c8130f46d0e6c79f9b2 670 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 331 1.8E-82 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 M634_12940 9a4893f58a194c8130f46d0e6c79f9b2 670 PRINTS PR00419 Adrenodoxin reductase family signature 401 414 1.4E-9 T 12-10-2018 M634_12940 9a4893f58a194c8130f46d0e6c79f9b2 670 PRINTS PR00419 Adrenodoxin reductase family signature 378 400 1.4E-9 T 12-10-2018 M634_12940 9a4893f58a194c8130f46d0e6c79f9b2 670 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 378 630 1.2E-25 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 M634_12940 9a4893f58a194c8130f46d0e6c79f9b2 670 Gene3D G3DSA:3.50.50.60 471 623 1.6E-108 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_12940 9a4893f58a194c8130f46d0e6c79f9b2 670 Gene3D G3DSA:3.20.20.70 4 370 6.6E-121 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_12940 9a4893f58a194c8130f46d0e6c79f9b2 670 SUPERFAMILY SSF51395 4 364 2.03E-108 T 12-10-2018 M634_12940 9a4893f58a194c8130f46d0e6c79f9b2 670 SUPERFAMILY SSF51971 376 625 2.47E-41 T 12-10-2018 M634_12940 9a4893f58a194c8130f46d0e6c79f9b2 670 Gene3D G3DSA:3.40.50.720 377 664 1.6E-108 T 12-10-2018 M634_18435 1ba5711d6c6adb2d1a57ecb2d8897e1d 848 SMART SM00636 159 575 8.5E-162 T 12-10-2018 IPR011583 Chitinase II GO:0008061 M634_18435 1ba5711d6c6adb2d1a57ecb2d8897e1d 848 Gene3D G3DSA:2.60.40.10 694 785 4.2E-11 T 12-10-2018 IPR013783 Immunoglobulin-like fold M634_18435 1ba5711d6c6adb2d1a57ecb2d8897e1d 848 SUPERFAMILY SSF54556 461 546 6.87E-17 T 12-10-2018 IPR029070 Chitinase insertion domain superfamily M634_18435 1ba5711d6c6adb2d1a57ecb2d8897e1d 848 Gene3D G3DSA:2.60.40.10 22 132 1.9E-45 T 12-10-2018 IPR013783 Immunoglobulin-like fold M634_18435 1ba5711d6c6adb2d1a57ecb2d8897e1d 848 Pfam PF02839 Carbohydrate binding domain 814 839 1.4E-5 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M634_18435 1ba5711d6c6adb2d1a57ecb2d8897e1d 848 SUPERFAMILY SSF49299 596 689 3.92E-7 T 12-10-2018 IPR035986 PKD domain superfamily M634_18435 1ba5711d6c6adb2d1a57ecb2d8897e1d 848 Gene3D G3DSA:2.60.40.10 597 692 3.1E-22 T 12-10-2018 IPR013783 Immunoglobulin-like fold M634_18435 1ba5711d6c6adb2d1a57ecb2d8897e1d 848 SUPERFAMILY SSF51445 135 588 7.33E-92 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M634_18435 1ba5711d6c6adb2d1a57ecb2d8897e1d 848 SUPERFAMILY SSF81296 21 133 6.3E-33 T 12-10-2018 IPR014756 Immunoglobulin E-set M634_18435 1ba5711d6c6adb2d1a57ecb2d8897e1d 848 Gene3D G3DSA:3.10.50.10 466 551 1.0E-175 T 12-10-2018 IPR029070 Chitinase insertion domain superfamily M634_18435 1ba5711d6c6adb2d1a57ecb2d8897e1d 848 Pfam PF08329 Chitinase A, N-terminal domain 21 156 8.8E-56 T 12-10-2018 IPR013540 Chitinase A N-terminal GO:0004568|GO:0006032 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 M634_18435 1ba5711d6c6adb2d1a57ecb2d8897e1d 848 ProSitePatterns PS01095 Chitinases family 18 active site. 307 315 - T 12-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 M634_18435 1ba5711d6c6adb2d1a57ecb2d8897e1d 848 SMART SM00495 797 842 1.0E-14 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M634_18435 1ba5711d6c6adb2d1a57ecb2d8897e1d 848 Gene3D G3DSA:2.10.10.20 796 840 2.1E-18 T 12-10-2018 M634_18435 1ba5711d6c6adb2d1a57ecb2d8897e1d 848 SMART SM00089 33 134 0.68 T 12-10-2018 IPR022409 PKD/Chitinase domain M634_18435 1ba5711d6c6adb2d1a57ecb2d8897e1d 848 SMART SM00089 600 690 0.012 T 12-10-2018 IPR022409 PKD/Chitinase domain M634_18435 1ba5711d6c6adb2d1a57ecb2d8897e1d 848 SMART SM00089 701 787 1.1 T 12-10-2018 IPR022409 PKD/Chitinase domain M634_18435 1ba5711d6c6adb2d1a57ecb2d8897e1d 848 Gene3D G3DSA:3.20.20.80 162 577 1.0E-175 T 12-10-2018 M634_18435 1ba5711d6c6adb2d1a57ecb2d8897e1d 848 Pfam PF02010 REJ domain 614 785 2.3E-5 T 12-10-2018 IPR002859 PKD/REJ-like domain M634_18435 1ba5711d6c6adb2d1a57ecb2d8897e1d 848 SUPERFAMILY SSF51055 783 843 2.88E-15 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M634_18435 1ba5711d6c6adb2d1a57ecb2d8897e1d 848 Pfam PF00704 Glycosyl hydrolases family 18 162 575 1.8E-89 T 12-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 M634_12335 ec4afc3122cd5fb9f7e7b07a13a04ac2 97 Pfam PF06305 Lipopolysaccharide assembly protein A domain 22 81 9.3E-18 T 12-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 M634_12335 ec4afc3122cd5fb9f7e7b07a13a04ac2 97 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 93 20.821 T 12-10-2018 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 M634_22695 2304b1e3e03acbffb7cb47677da119d7 774 PIRSF PIRSF000144 1 767 0.0 T 12-10-2018 M634_22695 2304b1e3e03acbffb7cb47677da119d7 774 Pfam PF01568 Molydopterin dinucleotide binding domain 649 736 7.8E-8 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 M634_22695 2304b1e3e03acbffb7cb47677da119d7 774 Gene3D G3DSA:3.40.228.10 182 404 1.5E-67 T 12-10-2018 M634_22695 2304b1e3e03acbffb7cb47677da119d7 774 SUPERFAMILY SSF53706 48 631 1.83E-149 T 12-10-2018 M634_22695 2304b1e3e03acbffb7cb47677da119d7 774 SUPERFAMILY SSF50692 645 764 1.88E-16 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily M634_22695 2304b1e3e03acbffb7cb47677da119d7 774 Gene3D G3DSA:3.40.50.740 122 498 1.5E-67 T 12-10-2018 M634_22695 2304b1e3e03acbffb7cb47677da119d7 774 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 14 762 3.1E-292 T 12-10-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 M634_22695 2304b1e3e03acbffb7cb47677da119d7 774 Pfam PF00384 Molybdopterin oxidoreductase 110 492 3.2E-24 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M634_13095 f5a8f77d641be24caa84048d20292d5b 194 Pfam PF11351 Holin of 3TMs, for gene-transfer release 63 168 1.6E-12 T 12-10-2018 IPR021497 Holin of 3TMs, for gene-transfer release M634_19900 c191497ce8afb6619dad4fd7da39b83c 299 SUPERFAMILY SSF161098 24 294 3.92E-39 T 12-10-2018 IPR035906 MetI-like superfamily M634_19900 c191497ce8afb6619dad4fd7da39b83c 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 285 1.1E-9 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_19900 c191497ce8afb6619dad4fd7da39b83c 299 Gene3D G3DSA:1.10.3720.10 23 285 3.3E-31 T 12-10-2018 IPR035906 MetI-like superfamily M634_18550 762334fba22f6d396dea508c8799e7aa 103 Gene3D G3DSA:2.60.120.10 13 103 3.2E-37 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M634_18550 762334fba22f6d396dea508c8799e7aa 103 SUPERFAMILY SSF51182 2 102 3.93E-18 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily M634_18550 762334fba22f6d396dea508c8799e7aa 103 Pfam PF07883 Cupin domain 44 101 3.4E-10 T 12-10-2018 IPR013096 Cupin 2, conserved barrel M634_14695 6410219e495a87d75f2ee19b99e8d578 276 SUPERFAMILY SSF51717 2 274 2.75E-104 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 M634_14695 6410219e495a87d75f2ee19b99e8d578 276 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 M634_14695 6410219e495a87d75f2ee19b99e8d578 276 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 17 271 2.3E-102 T 12-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 M634_14695 6410219e495a87d75f2ee19b99e8d578 276 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 M634_14695 6410219e495a87d75f2ee19b99e8d578 276 Gene3D G3DSA:3.20.20.20 1 275 3.8E-110 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 M634_14695 6410219e495a87d75f2ee19b99e8d578 276 Pfam PF00809 Pterin binding enzyme 18 257 7.2E-90 T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 M634_23940 5214fea0e6f3de23363f8badcedf6dd9 606 SMART SM00267 166 330 3.6E-25 T 12-10-2018 IPR000160 GGDEF domain M634_23940 5214fea0e6f3de23363f8badcedf6dd9 606 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 177 329 1.6E-25 T 12-10-2018 IPR000160 GGDEF domain M634_23940 5214fea0e6f3de23363f8badcedf6dd9 606 SUPERFAMILY SSF55781 22 149 4.05E-5 T 12-10-2018 M634_23940 5214fea0e6f3de23363f8badcedf6dd9 606 SMART SM00052 345 593 9.1E-79 T 12-10-2018 IPR001633 EAL domain M634_23940 5214fea0e6f3de23363f8badcedf6dd9 606 Pfam PF00990 Diguanylate cyclase, GGDEF domain 178 324 2.3E-27 T 12-10-2018 IPR000160 GGDEF domain M634_23940 5214fea0e6f3de23363f8badcedf6dd9 606 SUPERFAMILY SSF141868 358 601 3.01E-73 T 12-10-2018 IPR035919 EAL domain superfamily M634_23940 5214fea0e6f3de23363f8badcedf6dd9 606 SUPERFAMILY SSF55073 182 332 9.42E-31 T 12-10-2018 IPR029787 Nucleotide cyclase M634_23940 5214fea0e6f3de23363f8badcedf6dd9 606 Gene3D G3DSA:3.20.20.450 345 605 8.2E-76 T 12-10-2018 IPR035919 EAL domain superfamily M634_23940 5214fea0e6f3de23363f8badcedf6dd9 606 Gene3D G3DSA:3.30.70.270 171 344 2.2E-35 T 12-10-2018 M634_23940 5214fea0e6f3de23363f8badcedf6dd9 606 Pfam PF00563 EAL domain 353 588 8.7E-63 T 12-10-2018 IPR001633 EAL domain M634_17135 f46c39eb8536488edd81c5f5e9d883e2 118 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 12 117 8.2E-15 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 M634_17135 f46c39eb8536488edd81c5f5e9d883e2 118 Pfam PF02049 Flagellar hook-basal body complex protein FliE 40 118 6.1E-24 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 M634_17135 f46c39eb8536488edd81c5f5e9d883e2 118 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 48 64 2.2E-10 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 M634_17135 f46c39eb8536488edd81c5f5e9d883e2 118 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 82 98 2.2E-10 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 M634_17135 f46c39eb8536488edd81c5f5e9d883e2 118 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 103 116 2.2E-10 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 M634_17135 f46c39eb8536488edd81c5f5e9d883e2 118 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 17 118 15.205 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 M634_15455 0f3f90ad769f92044a5db586d2a19d29 165 SMART SM00731 11 160 6.9E-54 T 12-10-2018 IPR006640 SprT-like M634_15455 0f3f90ad769f92044a5db586d2a19d29 165 Hamap MF_00746 Protein SprT [sprT]. 7 160 42.576 T 12-10-2018 IPR023483 Uncharacterised protein family SprT M634_15455 0f3f90ad769f92044a5db586d2a19d29 165 Pfam PF10263 SprT-like family 16 114 2.0E-18 T 12-10-2018 IPR006640 SprT-like M634_15455 0f3f90ad769f92044a5db586d2a19d29 165 Pfam PF17283 SprT-like zinc ribbon domain 120 160 1.2E-10 T 12-10-2018 IPR035240 SprT-like, zinc ribbon domain M634_16795 f88a3f2a5b6d8cdaf08839131a74ab7c 768 Pfam PF01483 Proprotein convertase P-domain 631 715 1.3E-19 T 12-10-2018 IPR002884 P domain GO:0004252|GO:0006508 M634_16795 f88a3f2a5b6d8cdaf08839131a74ab7c 768 SUPERFAMILY SSF49785 596 717 5.95E-18 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily M634_16795 f88a3f2a5b6d8cdaf08839131a74ab7c 768 SUPERFAMILY SSF55486 171 486 2.2E-40 T 12-10-2018 M634_16795 f88a3f2a5b6d8cdaf08839131a74ab7c 768 Gene3D G3DSA:2.60.120.260 597 748 1.9E-12 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily M634_03730 34bd80bbfd61a1ec10ff7a55f28a5c7e 602 Pfam PF00501 AMP-binding enzyme 14 466 9.7E-100 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 M634_03730 34bd80bbfd61a1ec10ff7a55f28a5c7e 602 Gene3D G3DSA:3.40.50.12780 317 459 1.4E-33 T 12-10-2018 M634_03730 34bd80bbfd61a1ec10ff7a55f28a5c7e 602 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 12-10-2018 IPR020845 AMP-binding, conserved site M634_03730 34bd80bbfd61a1ec10ff7a55f28a5c7e 602 Gene3D G3DSA:3.40.50.12780 1 314 1.8E-54 T 12-10-2018 M634_03730 34bd80bbfd61a1ec10ff7a55f28a5c7e 602 SUPERFAMILY SSF56801 7 596 9.42E-116 T 12-10-2018 M634_00275 2232d530fc188de5df8a334f429f9853 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 12-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 M634_00275 2232d530fc188de5df8a334f429f9853 334 SUPERFAMILY SSF51735 1 167 2.62E-41 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_00275 2232d530fc188de5df8a334f429f9853 334 Gene3D G3DSA:3.40.50.720 6 329 3.6E-120 T 12-10-2018 M634_00275 2232d530fc188de5df8a334f429f9853 334 SMART SM00859 3 146 8.2E-45 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 M634_00275 2232d530fc188de5df8a334f429f9853 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 37.987 T 12-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 M634_00275 2232d530fc188de5df8a334f429f9853 334 Gene3D G3DSA:3.30.360.10 153 312 3.6E-120 T 12-10-2018 M634_00275 2232d530fc188de5df8a334f429f9853 334 SUPERFAMILY SSF55347 154 308 1.83E-50 T 12-10-2018 M634_00275 2232d530fc188de5df8a334f429f9853 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 165 311 1.6E-14 T 12-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 M634_00275 2232d530fc188de5df8a334f429f9853 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 5.0E-119 T 12-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 M634_00275 2232d530fc188de5df8a334f429f9853 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 146 1.1E-32 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 M634_05570 ac4bf7625ceef76fcec5272edb581be9 365 SUPERFAMILY SSF52540 119 320 9.27E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_05570 ac4bf7625ceef76fcec5272edb581be9 365 Pfam PF02562 PhoH-like protein 120 323 4.0E-94 T 12-10-2018 IPR003714 PhoH-like protein GO:0005524 M634_05570 ac4bf7625ceef76fcec5272edb581be9 365 Gene3D G3DSA:3.40.50.300 117 323 4.3E-73 T 12-10-2018 M634_00885 207e57bce0a90ef89fd59d34f2e1a39c 396 Pfam PF12832 MFS_1 like family 13 361 3.6E-39 T 12-10-2018 IPR024989 Major facilitator superfamily associated domain M634_00885 207e57bce0a90ef89fd59d34f2e1a39c 396 Gene3D G3DSA:1.20.1250.20 2 186 1.6E-17 T 12-10-2018 M634_00885 207e57bce0a90ef89fd59d34f2e1a39c 396 Gene3D G3DSA:1.20.1250.20 195 383 4.0E-32 T 12-10-2018 M634_00885 207e57bce0a90ef89fd59d34f2e1a39c 396 SUPERFAMILY SSF103473 8 373 1.57E-35 T 12-10-2018 IPR036259 MFS transporter superfamily M634_00885 207e57bce0a90ef89fd59d34f2e1a39c 396 PIRSF PIRSF004925 1 385 1.1E-103 T 12-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter M634_14950 48a8c21d81cbc44bc2746a325e5250b6 176 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 172 5.1E-74 T 12-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 M634_14950 48a8c21d81cbc44bc2746a325e5250b6 176 Gene3D G3DSA:3.40.50.2020 1 176 6.3E-66 T 12-10-2018 M634_14950 48a8c21d81cbc44bc2746a325e5250b6 176 SUPERFAMILY SSF53271 3 175 6.39E-56 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like M634_14950 48a8c21d81cbc44bc2746a325e5250b6 176 Pfam PF00156 Phosphoribosyl transferase domain 12 159 2.7E-25 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 M634_21200 1a39b1cb93fcf8ab698ab61e5274ae27 5227 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 5093 5111 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site M634_21200 1a39b1cb93fcf8ab698ab61e5274ae27 5227 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2404 2549 3.9E-47 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain M634_21200 1a39b1cb93fcf8ab698ab61e5274ae27 5227 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1667 1807 2.0E-56 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain M634_21200 1a39b1cb93fcf8ab698ab61e5274ae27 5227 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 809 950 9.4E-53 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain M634_21200 1a39b1cb93fcf8ab698ab61e5274ae27 5227 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 952 1093 1.1E-56 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain M634_21200 1a39b1cb93fcf8ab698ab61e5274ae27 5227 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2256 2399 1.5E-42 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain M634_21200 1a39b1cb93fcf8ab698ab61e5274ae27 5227 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1381 1520 6.4E-56 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain M634_21200 1a39b1cb93fcf8ab698ab61e5274ae27 5227 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2107 2254 4.7E-45 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain M634_21200 1a39b1cb93fcf8ab698ab61e5274ae27 5227 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1095 1235 4.5E-56 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain M634_21200 1a39b1cb93fcf8ab698ab61e5274ae27 5227 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 506 665 1.0E-27 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain M634_21200 1a39b1cb93fcf8ab698ab61e5274ae27 5227 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1524 1660 5.2E-57 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain M634_21200 1a39b1cb93fcf8ab698ab61e5274ae27 5227 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2555 2702 3.9E-46 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain M634_21200 1a39b1cb93fcf8ab698ab61e5274ae27 5227 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2704 2861 5.7E-50 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain M634_21200 1a39b1cb93fcf8ab698ab61e5274ae27 5227 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 667 804 7.8E-57 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain M634_21200 1a39b1cb93fcf8ab698ab61e5274ae27 5227 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1810 1952 1.3E-54 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain M634_21200 1a39b1cb93fcf8ab698ab61e5274ae27 5227 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1238 1377 3.2E-55 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain M634_21200 1a39b1cb93fcf8ab698ab61e5274ae27 5227 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1956 2104 5.3E-45 T 12-10-2018 IPR019959 T1SS-143 repeat-containing domain M634_21200 1a39b1cb93fcf8ab698ab61e5274ae27 5227 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 5135 5224 9.5E-13 T 12-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass M634_21200 1a39b1cb93fcf8ab698ab61e5274ae27 5227 PRINTS PR00313 NodO calcium binding signature 5097 5105 1.9E-6 T 12-10-2018 M634_21200 1a39b1cb93fcf8ab698ab61e5274ae27 5227 PRINTS PR00313 NodO calcium binding signature 5085 5096 1.9E-6 T 12-10-2018 M634_21200 1a39b1cb93fcf8ab698ab61e5274ae27 5227 PRINTS PR00313 NodO calcium binding signature 5106 5114 1.9E-6 T 12-10-2018 M634_21200 1a39b1cb93fcf8ab698ab61e5274ae27 5227 PRINTS PR00313 NodO calcium binding signature 5115 5124 1.9E-6 T 12-10-2018 M634_21200 1a39b1cb93fcf8ab698ab61e5274ae27 5227 Gene3D G3DSA:2.150.10.10 5076 5206 2.1E-18 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal M634_21200 1a39b1cb93fcf8ab698ab61e5274ae27 5227 SUPERFAMILY SSF51120 5059 5159 8.37E-18 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal M634_21200 1a39b1cb93fcf8ab698ab61e5274ae27 5227 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1001 1079 5.5E-4 T 12-10-2018 IPR010221 VCBS repeat M634_21200 1a39b1cb93fcf8ab698ab61e5274ae27 5227 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 5102 5120 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site M634_09970 4517e749859ab5edb1319fe0bc5de501 700 Pfam PF10531 SLBB domain 590 633 4.2E-10 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M634_09970 4517e749859ab5edb1319fe0bc5de501 700 Pfam PF10531 SLBB domain 495 538 2.7E-4 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M634_09970 4517e749859ab5edb1319fe0bc5de501 700 Pfam PF10531 SLBB domain 212 253 8.5E-8 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M634_09970 4517e749859ab5edb1319fe0bc5de501 700 Pfam PF10531 SLBB domain 396 446 1.0E-7 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M634_09970 4517e749859ab5edb1319fe0bc5de501 700 Pfam PF10531 SLBB domain 105 151 2.5E-4 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M634_09970 4517e749859ab5edb1319fe0bc5de501 700 Pfam PF10531 SLBB domain 299 352 9.7E-12 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M634_09970 4517e749859ab5edb1319fe0bc5de501 700 Gene3D G3DSA:3.10.560.10 578 671 1.1E-18 T 12-10-2018 M634_09970 4517e749859ab5edb1319fe0bc5de501 700 Gene3D G3DSA:3.10.560.10 289 378 4.5E-15 T 12-10-2018 M634_09970 4517e749859ab5edb1319fe0bc5de501 700 Gene3D G3DSA:3.10.560.10 388 473 4.7E-14 T 12-10-2018 M634_09970 4517e749859ab5edb1319fe0bc5de501 700 Gene3D G3DSA:3.10.560.10 482 577 2.0E-16 T 12-10-2018 M634_09970 4517e749859ab5edb1319fe0bc5de501 700 Gene3D G3DSA:3.10.560.10 200 288 2.3E-17 T 12-10-2018 M634_09970 4517e749859ab5edb1319fe0bc5de501 700 Gene3D G3DSA:3.10.560.10 91 182 1.8E-14 T 12-10-2018 M634_09970 4517e749859ab5edb1319fe0bc5de501 700 Pfam PF02563 Polysaccharide biosynthesis/export protein 27 91 3.4E-10 T 12-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 M634_08250 ccd510470d26c083eafcd95eafedade3 1012 SUPERFAMILY SSF55103 252 538 3.27E-53 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 M634_08250 ccd510470d26c083eafcd95eafedade3 1012 Pfam PF02913 FAD linked oxidases, C-terminal domain 276 534 9.7E-62 T 12-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 M634_08250 ccd510470d26c083eafcd95eafedade3 1012 SUPERFAMILY SSF46548 571 685 5.1E-7 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 M634_08250 ccd510470d26c083eafcd95eafedade3 1012 SUPERFAMILY SSF56176 24 277 9.4E-52 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 M634_08250 ccd510470d26c083eafcd95eafedade3 1012 Gene3D G3DSA:3.30.465.40 16 212 2.3E-48 T 12-10-2018 M634_08250 ccd510470d26c083eafcd95eafedade3 1012 Pfam PF13183 4Fe-4S dicluster domain 570 681 5.0E-12 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M634_08250 ccd510470d26c083eafcd95eafedade3 1012 Pfam PF01565 FAD binding domain 52 191 1.4E-36 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 M634_08250 ccd510470d26c083eafcd95eafedade3 1012 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 667 678 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M634_08405 1375747eafa341d4aadd7f42895a0281 225 Pfam PF04172 LrgB-like family 6 217 3.4E-69 T 12-10-2018 IPR007300 CidB/LrgB family M634_21095 c38889941a169e2dd1d9d14cf2178ee1 269 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 40 268 2.3E-53 T 12-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 M634_21095 c38889941a169e2dd1d9d14cf2178ee1 269 Gene3D G3DSA:3.40.50.1580 36 269 1.6E-66 T 12-10-2018 M634_21095 c38889941a169e2dd1d9d14cf2178ee1 269 Pfam PF01048 Phosphorylase superfamily 39 258 1.0E-47 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 M634_21095 c38889941a169e2dd1d9d14cf2178ee1 269 SUPERFAMILY SSF53167 39 267 4.19E-63 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 M634_22120 83302e52387e42972cf45e0d4d627817 293 SMART SM00342 209 292 2.9E-26 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_22120 83302e52387e42972cf45e0d4d627817 293 Pfam PF12833 Helix-turn-helix domain 215 292 1.6E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_22120 83302e52387e42972cf45e0d4d627817 293 Gene3D G3DSA:1.10.10.60 188 293 2.1E-27 T 12-10-2018 M634_22120 83302e52387e42972cf45e0d4d627817 293 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 246 288 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 M634_22120 83302e52387e42972cf45e0d4d627817 293 Pfam PF06719 AraC-type transcriptional regulator N-terminus 27 180 1.6E-37 T 12-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal M634_22120 83302e52387e42972cf45e0d4d627817 293 SUPERFAMILY SSF46689 245 292 9.26E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_22120 83302e52387e42972cf45e0d4d627817 293 SUPERFAMILY SSF46689 193 243 1.18E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_09325 cd461065d5961d8f69f68cd377e66738 467 Gene3D G3DSA:1.10.287.950 139 466 5.6E-64 T 12-10-2018 M634_09325 cd461065d5961d8f69f68cd377e66738 467 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 252 431 8.0E-38 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_09325 cd461065d5961d8f69f68cd377e66738 467 SUPERFAMILY SSF58104 157 466 2.49E-66 T 12-10-2018 M634_09325 cd461065d5961d8f69f68cd377e66738 467 SMART SM00283 205 466 2.6E-59 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_00555 ece949a7466773d6cf19313cea09add0 154 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 139 2.8E-53 T 12-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 M634_00555 ece949a7466773d6cf19313cea09add0 154 SUPERFAMILY SSF52540 27 151 5.8E-24 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_00555 ece949a7466773d6cf19313cea09add0 154 Gene3D G3DSA:3.40.50.300 2 153 6.5E-50 T 12-10-2018 M634_00555 ece949a7466773d6cf19313cea09add0 154 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 133 9.7E-44 T 12-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 M634_06615 4ed59a5c9ddf876db84d5d376c1866b4 619 Pfam PF13624 SurA N-terminal domain 1 166 4.8E-51 T 12-10-2018 M634_06615 4ed59a5c9ddf876db84d5d376c1866b4 619 Gene3D G3DSA:3.10.50.40 269 363 9.5E-35 T 12-10-2018 M634_06615 4ed59a5c9ddf876db84d5d376c1866b4 619 SUPERFAMILY SSF54534 225 361 1.77E-31 T 12-10-2018 M634_06615 4ed59a5c9ddf876db84d5d376c1866b4 619 SUPERFAMILY SSF109998 39 245 1.57E-38 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily M634_06615 4ed59a5c9ddf876db84d5d376c1866b4 619 Gene3D G3DSA:1.10.4030.30 241 373 9.5E-35 T 12-10-2018 M634_06615 4ed59a5c9ddf876db84d5d376c1866b4 619 Pfam PF13616 PPIC-type PPIASE domain 262 361 1.3E-24 T 12-10-2018 M634_06615 4ed59a5c9ddf876db84d5d376c1866b4 619 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 299 320 - T 12-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 M634_14905 911d314881d75e8a8dd03e74638203c5 455 SUPERFAMILY SSF81891 182 419 5.62E-47 T 12-10-2018 M634_14905 911d314881d75e8a8dd03e74638203c5 455 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 211 271 5.4E-22 T 12-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 M634_14905 911d314881d75e8a8dd03e74638203c5 455 Pfam PF01743 Poly A polymerase head domain 54 184 2.1E-39 T 12-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 M634_14905 911d314881d75e8a8dd03e74638203c5 455 Gene3D G3DSA:1.10.3090.10 182 432 1.1E-91 T 12-10-2018 M634_14905 911d314881d75e8a8dd03e74638203c5 455 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 10 454 37.491 T 12-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 M634_14905 911d314881d75e8a8dd03e74638203c5 455 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 23 454 7.0E-161 T 12-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 M634_14905 911d314881d75e8a8dd03e74638203c5 455 Gene3D G3DSA:3.30.460.10 20 180 1.2E-63 T 12-10-2018 M634_14905 911d314881d75e8a8dd03e74638203c5 455 Pfam PF12626 Polymerase A arginine-rich C-terminus 330 447 2.8E-37 T 12-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain M634_14905 911d314881d75e8a8dd03e74638203c5 455 SUPERFAMILY SSF81301 26 181 3.49E-40 T 12-10-2018 M634_20525 661e8638bc28a1811bf160a16701b456 246 Gene3D G3DSA:3.40.50.720 1 245 1.5E-75 T 12-10-2018 M634_20525 661e8638bc28a1811bf160a16701b456 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 184 7.8E-4 T 12-10-2018 M634_20525 661e8638bc28a1811bf160a16701b456 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 M634_20525 661e8638bc28a1811bf160a16701b456 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 3 245 2.7E-116 T 12-10-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|MetaCyc: PWY-7948 M634_20525 661e8638bc28a1811bf160a16701b456 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 243 3.9E-58 T 12-10-2018 M634_20525 661e8638bc28a1811bf160a16701b456 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.5E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20525 661e8638bc28a1811bf160a16701b456 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.5E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20525 661e8638bc28a1811bf160a16701b456 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.5E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20525 661e8638bc28a1811bf160a16701b456 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.5E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20525 661e8638bc28a1811bf160a16701b456 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.5E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20525 661e8638bc28a1811bf160a16701b456 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 2.5E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20525 661e8638bc28a1811bf160a16701b456 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 4.4E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20525 661e8638bc28a1811bf160a16701b456 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 4.4E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20525 661e8638bc28a1811bf160a16701b456 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 4.4E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20525 661e8638bc28a1811bf160a16701b456 246 SUPERFAMILY SSF51735 2 245 1.0E-77 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_18755 2e5e0881b586f5c55c02814ee6709b99 199 Gene3D G3DSA:3.40.1280.10 1 199 2.8E-59 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal M634_18755 2e5e0881b586f5c55c02814ee6709b99 199 Pfam PF04013 Putative SAM-dependent RNA methyltransferase 1 198 1.1E-66 T 12-10-2018 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY GO:0008175 M634_18755 2e5e0881b586f5c55c02814ee6709b99 199 SUPERFAMILY SSF75217 1 198 1.7E-67 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases M634_18755 2e5e0881b586f5c55c02814ee6709b99 199 Hamap MF_00587 tRNA (pseudouridine(54)-N(1))-methyltransferase [trmY]. 1 198 28.126 T 12-10-2018 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY GO:0008175 M634_04175 d71e36c9a9d7ec928ee1ed98c689eec6 454 SUPERFAMILY SSF53623 100 313 1.57E-54 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 M634_04175 d71e36c9a9d7ec928ee1ed98c689eec6 454 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 451 33.823 T 12-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 M634_04175 d71e36c9a9d7ec928ee1ed98c689eec6 454 Gene3D G3DSA:3.90.190.20 315 453 2.8E-36 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 M634_04175 d71e36c9a9d7ec928ee1ed98c689eec6 454 Pfam PF01225 Mur ligase family, catalytic domain 24 91 1.0E-7 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 M634_04175 d71e36c9a9d7ec928ee1ed98c689eec6 454 SUPERFAMILY SSF53244 316 450 1.28E-33 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 M634_04175 d71e36c9a9d7ec928ee1ed98c689eec6 454 Pfam PF08245 Mur ligase middle domain 105 295 5.1E-49 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 M634_04175 d71e36c9a9d7ec928ee1ed98c689eec6 454 Gene3D G3DSA:3.40.1390.10 1 80 1.6E-28 T 12-10-2018 M634_04175 d71e36c9a9d7ec928ee1ed98c689eec6 454 Pfam PF02875 Mur ligase family, glutamate ligase domain 316 393 7.4E-11 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 M634_04175 d71e36c9a9d7ec928ee1ed98c689eec6 454 Gene3D G3DSA:3.40.1190.10 81 314 4.1E-75 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 M634_04175 d71e36c9a9d7ec928ee1ed98c689eec6 454 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 450 5.0E-142 T 12-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 M634_04175 d71e36c9a9d7ec928ee1ed98c689eec6 454 SUPERFAMILY SSF63418 1 96 3.53E-27 T 12-10-2018 IPR035911 MurE/MurF, N-terminal M634_09840 002c6e8732f50aceeb3fc7477f6d420d 232 Gene3D G3DSA:1.10.3720.10 2 228 7.2E-26 T 12-10-2018 IPR035906 MetI-like superfamily M634_09840 002c6e8732f50aceeb3fc7477f6d420d 232 SUPERFAMILY SSF161098 15 222 2.62E-29 T 12-10-2018 IPR035906 MetI-like superfamily M634_09840 002c6e8732f50aceeb3fc7477f6d420d 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 220 1.8E-8 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_06170 c8d2ff53da3a2d771da0e121b042e1e8 556 Gene3D G3DSA:3.40.50.620 30 247 2.1E-106 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M634_06170 c8d2ff53da3a2d771da0e121b042e1e8 556 Gene3D G3DSA:1.10.1160.10 261 339 8.4E-37 T 12-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 M634_06170 c8d2ff53da3a2d771da0e121b042e1e8 556 Gene3D G3DSA:2.40.240.10 348 463 4.9E-47 T 12-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 M634_06170 c8d2ff53da3a2d771da0e121b042e1e8 556 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 529 7.0E-64 T 12-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 M634_06170 c8d2ff53da3a2d771da0e121b042e1e8 556 SUPERFAMILY SSF52374 11 337 4.5E-104 T 12-10-2018 M634_06170 c8d2ff53da3a2d771da0e121b042e1e8 556 SUPERFAMILY SSF50715 340 548 1.26E-80 T 12-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 M634_06170 c8d2ff53da3a2d771da0e121b042e1e8 556 Gene3D G3DSA:2.40.240.10 464 548 3.9E-34 T 12-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 M634_06170 c8d2ff53da3a2d771da0e121b042e1e8 556 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 552 6.8E-299 T 12-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 M634_06170 c8d2ff53da3a2d771da0e121b042e1e8 556 Gene3D G3DSA:3.90.800.10 101 209 2.1E-106 T 12-10-2018 M634_06170 c8d2ff53da3a2d771da0e121b042e1e8 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 6.0E-10 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 M634_06170 c8d2ff53da3a2d771da0e121b042e1e8 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 6.0E-10 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 M634_06170 c8d2ff53da3a2d771da0e121b042e1e8 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 6.0E-10 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 M634_06170 c8d2ff53da3a2d771da0e121b042e1e8 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 6.0E-10 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 M634_06170 c8d2ff53da3a2d771da0e121b042e1e8 556 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 550 54.408 T 12-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 M634_06170 c8d2ff53da3a2d771da0e121b042e1e8 556 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 4.1E-127 T 12-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 M634_06170 c8d2ff53da3a2d771da0e121b042e1e8 556 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 M634_18340 87441a63fda95f7fd0a06afbdea46131 408 Pfam PF03616 Sodium/glutamate symporter 7 376 1.1E-152 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 M634_18340 87441a63fda95f7fd0a06afbdea46131 408 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 11 406 4.2E-137 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 M634_18340 87441a63fda95f7fd0a06afbdea46131 408 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 5 407 23.815 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 M634_20565 483191708b54a05381ca3319cfc75cc1 102 Hamap MF_02200 Chaperone NapD [napD]. 6 82 19.294 T 12-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly M634_20565 483191708b54a05381ca3319cfc75cc1 102 Gene3D G3DSA:3.30.70.920 6 75 2.2E-22 T 12-10-2018 M634_20565 483191708b54a05381ca3319cfc75cc1 102 Pfam PF03927 NapD protein 6 80 2.1E-29 T 12-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly M634_15050 3333ccf35fe09cb61f2d5f60c84c8761 460 SMART SM00963 1 86 5.3E-37 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 M634_15050 3333ccf35fe09cb61f2d5f60c84c8761 460 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 1.4E-73 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 M634_15050 3333ccf35fe09cb61f2d5f60c84c8761 460 SMART SM00962 100 296 7.1E-115 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 M634_15050 3333ccf35fe09cb61f2d5f60c84c8761 460 SUPERFAMILY SSF47446 329 430 7.19E-38 T 12-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 M634_15050 3333ccf35fe09cb61f2d5f60c84c8761 460 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.251 T 12-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 M634_15050 3333ccf35fe09cb61f2d5f60c84c8761 460 Gene3D G3DSA:3.40.50.300 90 285 4.0E-123 T 12-10-2018 M634_15050 3333ccf35fe09cb61f2d5f60c84c8761 460 SUPERFAMILY SSF52540 42 353 1.38E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_15050 3333ccf35fe09cb61f2d5f60c84c8761 460 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 4.0E-179 T 12-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 M634_15050 3333ccf35fe09cb61f2d5f60c84c8761 460 SMART SM00382 99 247 1.4E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_15050 3333ccf35fe09cb61f2d5f60c84c8761 460 Gene3D G3DSA:1.20.120.140 4 305 4.0E-123 T 12-10-2018 M634_15050 3333ccf35fe09cb61f2d5f60c84c8761 460 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 M634_15050 3333ccf35fe09cb61f2d5f60c84c8761 460 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.1E-22 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 M634_15050 3333ccf35fe09cb61f2d5f60c84c8761 460 Gene3D G3DSA:1.10.260.30 328 453 9.6E-45 T 12-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 M634_15050 3333ccf35fe09cb61f2d5f60c84c8761 460 Pfam PF02978 Signal peptide binding domain 329 427 3.9E-33 T 12-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 M634_02825 a17f879dd8e283879e3103b7d824e48f 210 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 130 208 3.6E-16 T 12-10-2018 IPR037682 TonB, C-terminal GO:0055085 M634_02825 a17f879dd8e283879e3103b7d824e48f 210 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 132 209 1.3E-13 T 12-10-2018 IPR006260 TonB/TolA, C-terminal M634_02825 a17f879dd8e283879e3103b7d824e48f 210 Gene3D G3DSA:3.30.1150.10 111 209 2.8E-21 T 12-10-2018 M634_02825 a17f879dd8e283879e3103b7d824e48f 210 SUPERFAMILY SSF74653 122 207 3.4E-18 T 12-10-2018 M634_09570 2153ac63be9a4cceae937f4e67b472ce 393 SMART SM00897 28 222 3.0E-32 T 12-10-2018 IPR013702 FIST domain, N-terminal M634_09570 2153ac63be9a4cceae937f4e67b472ce 393 SMART SM01204 223 370 7.2E-28 T 12-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 M634_09570 2153ac63be9a4cceae937f4e67b472ce 393 Pfam PF10442 FIST C domain 223 369 7.5E-19 T 12-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 M634_09570 2153ac63be9a4cceae937f4e67b472ce 393 Pfam PF08495 FIST N domain 32 221 1.7E-23 T 12-10-2018 IPR013702 FIST domain, N-terminal M634_05100 a5f59fde042d9263579c0102e167f2f1 422 Gene3D G3DSA:3.90.1150.10 289 422 6.6E-53 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M634_05100 a5f59fde042d9263579c0102e167f2f1 422 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 196 210 - T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 M634_05100 a5f59fde042d9263579c0102e167f2f1 422 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 3 420 3.0E-201 T 12-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 M634_05100 a5f59fde042d9263579c0102e167f2f1 422 SUPERFAMILY SSF53383 1 421 1.17E-127 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_05100 a5f59fde042d9263579c0102e167f2f1 422 Gene3D G3DSA:3.40.640.10 1 285 7.2E-101 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_05100 a5f59fde042d9263579c0102e167f2f1 422 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 420 8.9E-144 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 M634_05100 a5f59fde042d9263579c0102e167f2f1 422 PIRSF PIRSF001434 1 422 1.3E-130 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 M634_04280 6ff77e9f038a1f30f78611f3f1ae9f8a 274 SUPERFAMILY SSF53807 19 266 1.61E-58 T 12-10-2018 M634_04280 6ff77e9f038a1f30f78611f3f1ae9f8a 274 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 1 271 52.028 T 12-10-2018 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 M634_04280 6ff77e9f038a1f30f78611f3f1ae9f8a 274 Pfam PF01497 Periplasmic binding protein 25 246 1.3E-29 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain M634_04280 6ff77e9f038a1f30f78611f3f1ae9f8a 274 Gene3D G3DSA:3.40.50.1980 143 270 2.5E-29 T 12-10-2018 M634_04280 6ff77e9f038a1f30f78611f3f1ae9f8a 274 Gene3D G3DSA:3.40.50.1980 22 139 1.1E-34 T 12-10-2018 M634_23665 6d40d074aaad57703238f85e1d334210 191 Gene3D G3DSA:3.40.50.150 15 188 5.9E-26 T 12-10-2018 M634_23665 6d40d074aaad57703238f85e1d334210 191 SUPERFAMILY SSF53335 5 191 1.84E-28 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_23665 6d40d074aaad57703238f85e1d334210 191 Pfam PF13489 Methyltransferase domain 36 145 6.8E-17 T 12-10-2018 M634_23390 e342bb30fa034da94f25ec5c48737298 288 Gene3D G3DSA:1.10.357.140 13 164 7.9E-18 T 12-10-2018 M634_23390 e342bb30fa034da94f25ec5c48737298 288 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 3 276 5.4E-83 T 12-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 M634_23390 e342bb30fa034da94f25ec5c48737298 288 Pfam PF01040 UbiA prenyltransferase family 18 269 6.6E-55 T 12-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 M634_23390 e342bb30fa034da94f25ec5c48737298 288 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 1 284 16.945 T 12-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 M634_23390 e342bb30fa034da94f25ec5c48737298 288 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 57 79 - T 12-10-2018 IPR030470 UbiA prenyltransferase conserved site M634_19005 ee8063ad4fc3d8a901aa1d4ecddb67c3 463 Pfam PF00232 Glycosyl hydrolase family 1 3 457 1.2E-147 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 M634_19005 ee8063ad4fc3d8a901aa1d4ecddb67c3 463 SUPERFAMILY SSF51445 1 455 2.52E-157 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M634_19005 ee8063ad4fc3d8a901aa1d4ecddb67c3 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 292 306 2.6E-14 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 M634_19005 ee8063ad4fc3d8a901aa1d4ecddb67c3 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 356 364 2.6E-14 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 M634_19005 ee8063ad4fc3d8a901aa1d4ecddb67c3 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 398 415 2.6E-14 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 M634_19005 ee8063ad4fc3d8a901aa1d4ecddb67c3 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 423 435 2.6E-14 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 M634_19005 ee8063ad4fc3d8a901aa1d4ecddb67c3 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 377 388 2.6E-14 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 M634_19005 ee8063ad4fc3d8a901aa1d4ecddb67c3 463 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 356 364 - T 12-10-2018 IPR018120 Glycoside hydrolase family 1, active site M634_19005 ee8063ad4fc3d8a901aa1d4ecddb67c3 463 Gene3D G3DSA:3.20.20.80 1 460 5.9E-150 T 12-10-2018 M634_19005 ee8063ad4fc3d8a901aa1d4ecddb67c3 463 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 12-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site M634_07330 09b1e3b290af03c5a93d4ee0ae5e124d 203 Pfam PF03695 Uncharacterised protein family (UPF0149) 17 192 3.7E-36 T 12-10-2018 IPR011978 Uncharacterised protein family UPF0149 M634_07330 09b1e3b290af03c5a93d4ee0ae5e124d 203 SUPERFAMILY SSF101327 15 190 4.58E-34 T 12-10-2018 IPR036255 YgfB-like superfamily M634_07330 09b1e3b290af03c5a93d4ee0ae5e124d 203 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 14 188 3.6E-56 T 12-10-2018 IPR011978 Uncharacterised protein family UPF0149 M634_22730 19058b4747c2b86caa132496ca3e6cfb 446 ProSitePatterns PS00942 glpT family of transporters signature. 151 167 - T 12-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 M634_22730 19058b4747c2b86caa132496ca3e6cfb 446 Pfam PF07690 Major Facilitator Superfamily 36 396 8.4E-48 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M634_22730 19058b4747c2b86caa132496ca3e6cfb 446 Gene3D G3DSA:1.20.1250.20 19 223 3.1E-52 T 12-10-2018 M634_22730 19058b4747c2b86caa132496ca3e6cfb 446 Gene3D G3DSA:1.20.1250.20 238 438 1.2E-43 T 12-10-2018 M634_22730 19058b4747c2b86caa132496ca3e6cfb 446 PIRSF PIRSF002808 7 443 6.8E-144 T 12-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 M634_22730 19058b4747c2b86caa132496ca3e6cfb 446 SUPERFAMILY SSF103473 17 441 1.11E-79 T 12-10-2018 IPR036259 MFS transporter superfamily M634_22730 19058b4747c2b86caa132496ca3e6cfb 446 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 413 3.2E-138 T 12-10-2018 M634_13190 1420f01e3ce6852669f862cd2a4f7766 180 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 79 85 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 M634_13190 1420f01e3ce6852669f862cd2a4f7766 180 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 76 88 2.7E-5 T 12-10-2018 M634_13190 1420f01e3ce6852669f862cd2a4f7766 180 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 12 28 2.7E-5 T 12-10-2018 M634_13190 1420f01e3ce6852669f862cd2a4f7766 180 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 36 50 2.7E-5 T 12-10-2018 M634_13190 1420f01e3ce6852669f862cd2a4f7766 180 SUPERFAMILY SSF53335 14 159 2.43E-13 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_13190 1420f01e3ce6852669f862cd2a4f7766 180 Gene3D G3DSA:3.40.50.150 15 123 6.1E-9 T 12-10-2018 M634_15895 70f431218be0d037238ebe9b0aabacbd 148 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 12-10-2018 IPR002178 PTS EIIA type-2 domain M634_15895 70f431218be0d037238ebe9b0aabacbd 148 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 2 145 8.1E-52 T 12-10-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 M634_15895 70f431218be0d037238ebe9b0aabacbd 148 SUPERFAMILY SSF55804 1 145 3.92E-41 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 M634_15895 70f431218be0d037238ebe9b0aabacbd 148 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 146 7.0E-38 T 12-10-2018 IPR002178 PTS EIIA type-2 domain M634_15895 70f431218be0d037238ebe9b0aabacbd 148 Gene3D G3DSA:3.40.930.10 1 148 7.4E-53 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 M634_21220 1716822bcc398c1115e2d72535b22d7e 689 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 166 8.2E-50 T 12-10-2018 IPR022161 DNA helicase IV, N-terminal domain M634_21220 1716822bcc398c1115e2d72535b22d7e 689 Gene3D G3DSA:1.10.10.160 300 416 2.1E-49 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily M634_21220 1716822bcc398c1115e2d72535b22d7e 689 Gene3D G3DSA:3.40.50.300 200 499 2.1E-49 T 12-10-2018 M634_21220 1716822bcc398c1115e2d72535b22d7e 689 Pfam PF13361 UvrD-like helicase C-terminal domain 596 667 1.8E-16 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 M634_21220 1716822bcc398c1115e2d72535b22d7e 689 Pfam PF00580 UvrD/REP helicase N-terminal domain 201 498 1.6E-39 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 M634_21220 1716822bcc398c1115e2d72535b22d7e 689 SUPERFAMILY SSF52540 198 678 3.25E-85 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_21220 1716822bcc398c1115e2d72535b22d7e 689 Gene3D G3DSA:3.40.50.300 507 681 7.8E-29 T 12-10-2018 M634_21395 47d8a0817a1331f570c983314515ed96 205 Gene3D G3DSA:3.40.50.1000 5 193 5.7E-41 T 12-10-2018 IPR023214 HAD superfamily M634_21395 47d8a0817a1331f570c983314515ed96 205 Pfam PF13419 Haloacid dehalogenase-like hydrolase 91 186 1.1E-12 T 12-10-2018 M634_21395 47d8a0817a1331f570c983314515ed96 205 SUPERFAMILY SSF56784 7 199 2.71E-36 T 12-10-2018 IPR036412 HAD-like superfamily M634_21395 47d8a0817a1331f570c983314515ed96 205 Gene3D G3DSA:1.10.150.240 19 88 5.7E-41 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 M634_21395 47d8a0817a1331f570c983314515ed96 205 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 101 114 9.6E-14 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M634_21395 47d8a0817a1331f570c983314515ed96 205 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 132 148 9.6E-14 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M634_21395 47d8a0817a1331f570c983314515ed96 205 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 150 170 9.6E-14 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M634_21395 47d8a0817a1331f570c983314515ed96 205 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 9.6E-14 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M634_21395 47d8a0817a1331f570c983314515ed96 205 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 177 190 9.6E-14 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M634_21395 47d8a0817a1331f570c983314515ed96 205 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 126 186 7.6E-13 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M634_22950 49a5317477e8d98a309067ed805a5b07 300 Pfam PF03466 LysR substrate binding domain 89 292 3.1E-41 T 12-10-2018 IPR005119 LysR, substrate-binding M634_22950 49a5317477e8d98a309067ed805a5b07 300 SUPERFAMILY SSF53850 89 295 3.57E-43 T 12-10-2018 M634_22950 49a5317477e8d98a309067ed805a5b07 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.2E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_22950 49a5317477e8d98a309067ed805a5b07 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.2E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_22950 49a5317477e8d98a309067ed805a5b07 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.2E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_22950 49a5317477e8d98a309067ed805a5b07 300 SUPERFAMILY SSF46785 3 87 7.37E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_22950 49a5317477e8d98a309067ed805a5b07 300 Gene3D G3DSA:3.40.190.10 91 289 3.5E-65 T 12-10-2018 M634_22950 49a5317477e8d98a309067ed805a5b07 300 Gene3D G3DSA:1.10.10.10 3 86 5.8E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_22950 49a5317477e8d98a309067ed805a5b07 300 Gene3D G3DSA:3.40.190.10 163 264 3.5E-65 T 12-10-2018 M634_22950 49a5317477e8d98a309067ed805a5b07 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 63 9.9E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_19655 4a38ae161bb5c30832ff0e39c419b7b4 466 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 374 457 4.4E-33 T 12-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 M634_19655 4a38ae161bb5c30832ff0e39c419b7b4 466 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 375 465 4.6E-17 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 M634_19655 4a38ae161bb5c30832ff0e39c419b7b4 466 Gene3D G3DSA:3.40.50.2300 366 466 1.1E-34 T 12-10-2018 M634_19655 4a38ae161bb5c30832ff0e39c419b7b4 466 SUPERFAMILY SSF52794 372 465 3.66E-29 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 M634_19655 4a38ae161bb5c30832ff0e39c419b7b4 466 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 11 341 3.2E-76 T 12-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 M634_05735 9c667ce7d27ec7c3d62b6439620802ad 127 PIRSF PIRSF005610 1 121 1.5E-19 T 12-10-2018 IPR007360 Invasion gene expression up-regulator, SirB M634_05735 9c667ce7d27ec7c3d62b6439620802ad 127 Pfam PF04247 Invasion gene expression up-regulator, SirB 2 123 1.8E-39 T 12-10-2018 IPR007360 Invasion gene expression up-regulator, SirB M634_24750 43497b6ebe822bab108228340cab0c8f 280 Gene3D G3DSA:3.30.1330.60 165 278 3.5E-16 T 12-10-2018 IPR036737 OmpA-like domain superfamily M634_24750 43497b6ebe822bab108228340cab0c8f 280 SUPERFAMILY SSF103088 168 253 2.09E-16 T 12-10-2018 IPR036737 OmpA-like domain superfamily M634_24750 43497b6ebe822bab108228340cab0c8f 280 Pfam PF00691 OmpA family 176 264 2.8E-12 T 12-10-2018 IPR006665 OmpA-like domain M634_24750 43497b6ebe822bab108228340cab0c8f 280 PRINTS PR01021 OMPA domain signature 222 238 9.7E-6 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M634_24750 43497b6ebe822bab108228340cab0c8f 280 PRINTS PR01021 OMPA domain signature 207 222 9.7E-6 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M634_24750 43497b6ebe822bab108228340cab0c8f 280 PRINTS PR01021 OMPA domain signature 177 199 9.7E-6 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M634_03115 a0e9600671254984348bb79e3eea3005 244 PIRSF PIRSF028162 1 244 1.5E-90 T 12-10-2018 IPR016873 Capsular polysaccharide biosynthesis protein, BcbE, predicted M634_03115 a0e9600671254984348bb79e3eea3005 244 SUPERFAMILY SSF53448 2 240 3.75E-23 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M634_03115 a0e9600671254984348bb79e3eea3005 244 Gene3D G3DSA:3.90.550.10 1 244 1.7E-61 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M634_02325 a3971ec9afe39d993718ae91d229a6cd 458 PIRSF PIRSF002746 9 458 9.8E-145 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 M634_02325 a3971ec9afe39d993718ae91d229a6cd 458 Pfam PF02447 GntP family permease 14 456 1.8E-117 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 M634_02325 a3971ec9afe39d993718ae91d229a6cd 458 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 15 457 5.2E-107 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 M634_01945 182dc7c9909f220349e1552a51ca2d71 246 Gene3D G3DSA:1.10.3720.10 32 242 1.1E-54 T 12-10-2018 IPR035906 MetI-like superfamily M634_01945 182dc7c9909f220349e1552a51ca2d71 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 38 136 4.0E-29 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 M634_01945 182dc7c9909f220349e1552a51ca2d71 246 SUPERFAMILY SSF161098 41 227 1.7E-45 T 12-10-2018 IPR035906 MetI-like superfamily M634_01945 182dc7c9909f220349e1552a51ca2d71 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 60 242 4.7E-25 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_11100 df1e12ad99da6dc542f8a85b080d0f20 113 Pfam PF07653 Variant SH3 domain 7 57 3.5E-5 T 12-10-2018 IPR001452 SH3 domain GO:0005515 M634_11100 df1e12ad99da6dc542f8a85b080d0f20 113 SUPERFAMILY SSF50044 4 60 2.04E-7 T 12-10-2018 IPR036028 SH3-like domain superfamily GO:0005515 M634_11100 df1e12ad99da6dc542f8a85b080d0f20 113 Gene3D G3DSA:2.30.30.40 65 113 2.2E-5 T 12-10-2018 M634_11100 df1e12ad99da6dc542f8a85b080d0f20 113 PIRSF PIRSF034961 1 113 3.6E-28 T 12-10-2018 IPR014593 Uncharacterised conserved protein UCP034961, SH3-2 M634_11100 df1e12ad99da6dc542f8a85b080d0f20 113 SUPERFAMILY SSF50044 69 111 4.21E-6 T 12-10-2018 IPR036028 SH3-like domain superfamily GO:0005515 M634_22825 4873043f30f065930347e530eabe6c3d 252 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 11 244 1.6E-94 T 12-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 M634_22825 4873043f30f065930347e530eabe6c3d 252 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 14 222 3.3E-49 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 M634_22825 4873043f30f065930347e530eabe6c3d 252 Gene3D G3DSA:3.30.950.10 127 251 3.2E-44 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 M634_22825 4873043f30f065930347e530eabe6c3d 252 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 91 124 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 M634_22825 4873043f30f065930347e530eabe6c3d 252 Gene3D G3DSA:3.40.1010.10 10 126 4.0E-45 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 M634_22825 4873043f30f065930347e530eabe6c3d 252 SUPERFAMILY SSF53790 7 250 3.01E-79 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 M634_22825 4873043f30f065930347e530eabe6c3d 252 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 16 30 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 M634_20145 37151c59ef1683e8ffc31ff648800455 239 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 237 2.5E-62 T 12-10-2018 M634_20145 37151c59ef1683e8ffc31ff648800455 239 Gene3D G3DSA:3.40.50.720 1 239 1.2E-81 T 12-10-2018 M634_20145 37151c59ef1683e8ffc31ff648800455 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 1.7E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20145 37151c59ef1683e8ffc31ff648800455 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 1.7E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20145 37151c59ef1683e8ffc31ff648800455 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 1.7E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20145 37151c59ef1683e8ffc31ff648800455 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 1.7E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20145 37151c59ef1683e8ffc31ff648800455 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 1.7E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20145 37151c59ef1683e8ffc31ff648800455 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.7E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20145 37151c59ef1683e8ffc31ff648800455 239 SUPERFAMILY SSF51735 4 238 4.03E-81 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_20145 37151c59ef1683e8ffc31ff648800455 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 4.7E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20145 37151c59ef1683e8ffc31ff648800455 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 4.7E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20145 37151c59ef1683e8ffc31ff648800455 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 4.7E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20145 37151c59ef1683e8ffc31ff648800455 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 M634_20145 37151c59ef1683e8ffc31ff648800455 239 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 183 4.5E-4 T 12-10-2018 M634_03470 f981a721a333819522be3ff8cbcf7ac3 205 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 14 197 7.7E-81 T 12-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 M634_03470 f981a721a333819522be3ff8cbcf7ac3 205 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 30 202 38.538 T 12-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 M634_03470 f981a721a333819522be3ff8cbcf7ac3 205 Gene3D G3DSA:3.40.50.300 9 205 5.6E-78 T 12-10-2018 M634_03470 f981a721a333819522be3ff8cbcf7ac3 205 Pfam PF01583 Adenylylsulphate kinase 31 185 2.3E-70 T 12-10-2018 M634_03470 f981a721a333819522be3ff8cbcf7ac3 205 SUPERFAMILY SSF52540 25 200 6.07E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_20355 5ab5da225adf5bec062f8dee715636af 412 Gene3D G3DSA:1.10.4160.10 4 410 3.2E-45 T 12-10-2018 IPR038271 Purine-cytosine permease superfamily M634_20355 5ab5da225adf5bec062f8dee715636af 412 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 11 397 1.5E-62 T 12-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 M634_00875 de0c757945bd4954c8ce5bfd8539d456 461 Gene3D G3DSA:1.10.275.10 3 133 9.2E-49 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal M634_00875 de0c757945bd4954c8ce5bfd8539d456 461 ProSitePatterns PS00163 Fumarate lyases signature. 312 321 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 M634_00875 de0c757945bd4954c8ce5bfd8539d456 461 SUPERFAMILY SSF48557 5 455 7.07E-134 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 M634_00875 de0c757945bd4954c8ce5bfd8539d456 461 Hamap MF_00743 Fumarate hydratase class II [fumC]. 5 457 74.205 T 12-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 M634_00875 de0c757945bd4954c8ce5bfd8539d456 461 Gene3D G3DSA:1.20.200.10 134 400 2.1E-93 T 12-10-2018 M634_00875 de0c757945bd4954c8ce5bfd8539d456 461 Pfam PF00206 Lyase 13 337 1.4E-90 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal M634_00875 de0c757945bd4954c8ce5bfd8539d456 461 PRINTS PR00145 Argininosuccinate lyase family signature 128 150 1.8E-5 T 12-10-2018 M634_00875 de0c757945bd4954c8ce5bfd8539d456 461 PRINTS PR00145 Argininosuccinate lyase family signature 312 328 1.8E-5 T 12-10-2018 M634_00875 de0c757945bd4954c8ce5bfd8539d456 461 PRINTS PR00145 Argininosuccinate lyase family signature 170 190 1.8E-5 T 12-10-2018 M634_00875 de0c757945bd4954c8ce5bfd8539d456 461 PRINTS PR00149 Fumarate lyase superfamily signature 175 193 5.0E-31 T 12-10-2018 IPR000362 Fumarate lyase family M634_00875 de0c757945bd4954c8ce5bfd8539d456 461 PRINTS PR00149 Fumarate lyase superfamily signature 266 293 5.0E-31 T 12-10-2018 IPR000362 Fumarate lyase family M634_00875 de0c757945bd4954c8ce5bfd8539d456 461 PRINTS PR00149 Fumarate lyase superfamily signature 129 147 5.0E-31 T 12-10-2018 IPR000362 Fumarate lyase family M634_00875 de0c757945bd4954c8ce5bfd8539d456 461 PRINTS PR00149 Fumarate lyase superfamily signature 312 328 5.0E-31 T 12-10-2018 IPR000362 Fumarate lyase family M634_00875 de0c757945bd4954c8ce5bfd8539d456 461 Gene3D G3DSA:1.10.40.30 403 454 2.3E-18 T 12-10-2018 M634_00875 de0c757945bd4954c8ce5bfd8539d456 461 Pfam PF10415 Fumarase C C-terminus 403 455 5.4E-19 T 12-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 M634_14330 731974de8c23b81e2c918b59ba8fa187 315 Gene3D G3DSA:1.20.58.340 125 249 8.3E-29 T 12-10-2018 M634_14330 731974de8c23b81e2c918b59ba8fa187 315 SUPERFAMILY SSF143865 25 236 5.49E-25 T 12-10-2018 M634_14330 731974de8c23b81e2c918b59ba8fa187 315 SUPERFAMILY SSF144083 245 306 6.54E-14 T 12-10-2018 M634_14330 731974de8c23b81e2c918b59ba8fa187 315 Gene3D G3DSA:1.20.58.340 252 308 9.3E-10 T 12-10-2018 M634_14330 731974de8c23b81e2c918b59ba8fa187 315 Pfam PF01544 CorA-like Mg2+ transporter protein 29 305 1.9E-46 T 12-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 M634_14330 731974de8c23b81e2c918b59ba8fa187 315 Gene3D G3DSA:3.30.460.20 1 124 5.1E-47 T 12-10-2018 M634_06320 711a296ff3a2ec113f0bfb931f94bc77 199 SUPERFAMILY SSF54593 2 197 2.08E-67 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M634_06320 711a296ff3a2ec113f0bfb931f94bc77 199 Gene3D G3DSA:3.10.180.10 6 199 8.5E-61 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M634_06320 711a296ff3a2ec113f0bfb931f94bc77 199 Pfam PF06185 YecM protein 14 196 3.1E-67 T 12-10-2018 IPR010393 Protein of unknown function DUF991 M634_01600 9b2bba859d59866d84cdf80d40eddac3 724 Gene3D G3DSA:3.40.50.300 282 637 2.4E-132 T 12-10-2018 M634_01600 9b2bba859d59866d84cdf80d40eddac3 724 TIGRFAM TIGR01075 uvrD: DNA helicase II 7 722 0.0 T 12-10-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 M634_01600 9b2bba859d59866d84cdf80d40eddac3 724 Pfam PF13361 UvrD-like helicase C-terminal domain 278 617 5.7E-80 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 M634_01600 9b2bba859d59866d84cdf80d40eddac3 724 Gene3D G3DSA:1.10.10.160 115 188 3.6E-97 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily M634_01600 9b2bba859d59866d84cdf80d40eddac3 724 SUPERFAMILY SSF52540 8 643 3.06E-180 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_01600 9b2bba859d59866d84cdf80d40eddac3 724 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 272 4.5E-74 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 M634_01600 9b2bba859d59866d84cdf80d40eddac3 724 Gene3D G3DSA:3.40.50.300 11 274 3.6E-97 T 12-10-2018 M634_01600 9b2bba859d59866d84cdf80d40eddac3 724 Gene3D G3DSA:1.10.486.10 383 539 2.4E-132 T 12-10-2018 M634_16700 0e41ef034be3534bc6226203e3cc4e02 196 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 45 63 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site M634_16700 0e41ef034be3534bc6226203e3cc4e02 196 Gene3D G3DSA:2.150.10.10 68 194 5.8E-17 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal M634_16700 0e41ef034be3534bc6226203e3cc4e02 196 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 63 81 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site M634_16700 0e41ef034be3534bc6226203e3cc4e02 196 PRINTS PR00313 NodO calcium binding signature 76 84 2.1E-12 T 12-10-2018 M634_16700 0e41ef034be3534bc6226203e3cc4e02 196 PRINTS PR00313 NodO calcium binding signature 94 103 2.1E-12 T 12-10-2018 M634_16700 0e41ef034be3534bc6226203e3cc4e02 196 PRINTS PR00313 NodO calcium binding signature 46 57 2.1E-12 T 12-10-2018 M634_16700 0e41ef034be3534bc6226203e3cc4e02 196 PRINTS PR00313 NodO calcium binding signature 58 66 2.1E-12 T 12-10-2018 M634_16700 0e41ef034be3534bc6226203e3cc4e02 196 Gene3D G3DSA:2.150.10.10 3 67 5.7E-9 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal M634_16700 0e41ef034be3534bc6226203e3cc4e02 196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 67 83 0.18 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 M634_16700 0e41ef034be3534bc6226203e3cc4e02 196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 103 118 0.24 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 M634_16700 0e41ef034be3534bc6226203e3cc4e02 196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 48 65 8.7E-5 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 M634_16700 0e41ef034be3534bc6226203e3cc4e02 196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3 16 9.6 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 M634_16700 0e41ef034be3534bc6226203e3cc4e02 196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 85 101 4.4 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 M634_16700 0e41ef034be3534bc6226203e3cc4e02 196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 24 37 3.5 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 M634_16700 0e41ef034be3534bc6226203e3cc4e02 196 SUPERFAMILY SSF51120 3 176 6.63E-24 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal M634_23240 6831941f5f7e4fa5fd298535cb88f282 592 SUPERFAMILY SSF52743 23 432 1.83E-58 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 M634_23240 6831941f5f7e4fa5fd298535cb88f282 592 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 339 349 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site M634_23240 6831941f5f7e4fa5fd298535cb88f282 592 Pfam PF01483 Proprotein convertase P-domain 475 556 1.7E-20 T 12-10-2018 IPR002884 P domain GO:0004252|GO:0006508 M634_23240 6831941f5f7e4fa5fd298535cb88f282 592 Pfam PF00082 Subtilase family 65 388 1.2E-30 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 M634_23240 6831941f5f7e4fa5fd298535cb88f282 592 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 70 81 - T 12-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site M634_23240 6831941f5f7e4fa5fd298535cb88f282 592 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 112 122 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site M634_23240 6831941f5f7e4fa5fd298535cb88f282 592 Gene3D G3DSA:2.60.120.260 438 592 1.4E-50 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily M634_23240 6831941f5f7e4fa5fd298535cb88f282 592 PRINTS PR00723 Subtilisin serine protease family (S8) signature 65 84 3.6E-17 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related M634_23240 6831941f5f7e4fa5fd298535cb88f282 592 PRINTS PR00723 Subtilisin serine protease family (S8) signature 108 121 3.6E-17 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related M634_23240 6831941f5f7e4fa5fd298535cb88f282 592 PRINTS PR00723 Subtilisin serine protease family (S8) signature 338 354 3.6E-17 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related M634_23240 6831941f5f7e4fa5fd298535cb88f282 592 Gene3D G3DSA:3.40.50.200 19 434 9.6E-99 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 M634_23240 6831941f5f7e4fa5fd298535cb88f282 592 SUPERFAMILY SSF49785 438 592 3.32E-25 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily M634_07150 462a5564bb1506109a0e4e367aebbbcc 215 Gene3D G3DSA:1.20.1280.20 129 214 1.1E-24 T 12-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 M634_07150 462a5564bb1506109a0e4e367aebbbcc 215 Gene3D G3DSA:1.20.120.1820 3 126 1.6E-38 T 12-10-2018 M634_07150 462a5564bb1506109a0e4e367aebbbcc 215 SUPERFAMILY SSF89155 8 212 7.59E-51 T 12-10-2018 IPR036411 TorD-like superfamily M634_07150 462a5564bb1506109a0e4e367aebbbcc 215 Hamap MF_01150 Chaperone protein TorD [torD]. 3 212 34.553 T 12-10-2018 IPR023069 Chaperone TorD M634_07150 462a5564bb1506109a0e4e367aebbbcc 215 Pfam PF02613 Nitrate reductase delta subunit 50 183 4.5E-36 T 12-10-2018 IPR020945 DMSO/Nitrate reductase chaperone M634_08005 ebd795c3243086bc65e45d1aeca757b6 326 TIGRFAM TIGR03508 decahem_SO: decaheme c-type cytochrome, DmsE family 59 319 5.8E-100 T 12-10-2018 IPR020015 Decaheme cytochrome, c-type, DmsE M634_08005 ebd795c3243086bc65e45d1aeca757b6 326 SUPERFAMILY SSF48695 61 310 4.71E-50 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily M634_08005 ebd795c3243086bc65e45d1aeca757b6 326 Gene3D G3DSA:1.10.1130.10 174 246 2.9E-5 T 12-10-2018 M634_08005 ebd795c3243086bc65e45d1aeca757b6 326 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 251 286 9.6E-12 T 12-10-2018 IPR010177 Doubled CXXCH motif M634_08005 ebd795c3243086bc65e45d1aeca757b6 326 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 90 147 4.0E-7 T 12-10-2018 IPR010177 Doubled CXXCH motif M634_08005 ebd795c3243086bc65e45d1aeca757b6 326 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 204 244 7.6E-11 T 12-10-2018 IPR010177 Doubled CXXCH motif M634_08005 ebd795c3243086bc65e45d1aeca757b6 326 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 161 193 2.8E-5 T 12-10-2018 IPR010177 Doubled CXXCH motif M634_08005 ebd795c3243086bc65e45d1aeca757b6 326 Gene3D G3DSA:1.10.1130.10 33 162 3.8E-9 T 12-10-2018 M634_08005 ebd795c3243086bc65e45d1aeca757b6 326 TIGRFAM TIGR01905 paired_CXXCH_1: doubled CXXCH domain 251 286 2.9E-11 T 12-10-2018 IPR010177 Doubled CXXCH motif M634_08005 ebd795c3243086bc65e45d1aeca757b6 326 TIGRFAM TIGR01905 paired_CXXCH_1: doubled CXXCH domain 211 243 5.6E-7 T 12-10-2018 IPR010177 Doubled CXXCH motif M634_08005 ebd795c3243086bc65e45d1aeca757b6 326 Gene3D G3DSA:3.90.10.10 247 324 3.0E-5 T 12-10-2018 M634_22680 a58e9cc4ad1198ef4050f16ff3fe0e09 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 22 37 2.4E-9 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M634_22680 a58e9cc4ad1198ef4050f16ff3fe0e09 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 54 69 2.4E-9 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M634_22680 a58e9cc4ad1198ef4050f16ff3fe0e09 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 69 84 2.4E-9 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M634_22680 a58e9cc4ad1198ef4050f16ff3fe0e09 102 Pfam PF12840 Helix-turn-helix domain 19 76 9.9E-7 T 12-10-2018 M634_22680 a58e9cc4ad1198ef4050f16ff3fe0e09 102 Gene3D G3DSA:1.10.10.10 7 102 7.2E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_22680 a58e9cc4ad1198ef4050f16ff3fe0e09 102 SUPERFAMILY SSF46785 14 101 5.85E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_22680 a58e9cc4ad1198ef4050f16ff3fe0e09 102 SMART SM00418 20 98 1.9E-15 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M634_23570 c60061de64ef60749980adfd666af5cb 488 Pfam PF00563 EAL domain 245 476 2.1E-61 T 12-10-2018 IPR001633 EAL domain M634_23570 c60061de64ef60749980adfd666af5cb 488 Pfam PF12792 CSS motif domain associated with EAL 35 108 5.9E-5 T 12-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain M634_23570 c60061de64ef60749980adfd666af5cb 488 SUPERFAMILY SSF141868 246 483 2.22E-69 T 12-10-2018 IPR035919 EAL domain superfamily M634_23570 c60061de64ef60749980adfd666af5cb 488 Gene3D G3DSA:3.20.20.450 241 485 1.1E-72 T 12-10-2018 IPR035919 EAL domain superfamily M634_23570 c60061de64ef60749980adfd666af5cb 488 SMART SM00052 239 481 8.9E-74 T 12-10-2018 IPR001633 EAL domain M634_06775 dae338a088ca89501ac63f4ffa180102 286 Gene3D G3DSA:3.10.129.90 2 286 2.0E-107 T 12-10-2018 M634_06775 dae338a088ca89501ac63f4ffa180102 286 SUPERFAMILY SSF54637 116 283 5.93E-59 T 12-10-2018 IPR029069 HotDog domain superfamily M634_06775 dae338a088ca89501ac63f4ffa180102 286 Pfam PF13622 Thioesterase-like superfamily 33 282 1.8E-61 T 12-10-2018 M634_06775 dae338a088ca89501ac63f4ffa180102 286 SUPERFAMILY SSF54637 6 114 5.6E-40 T 12-10-2018 IPR029069 HotDog domain superfamily M634_06775 dae338a088ca89501ac63f4ffa180102 286 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 4.6E-95 T 12-10-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 M634_08780 cc0153d19cad1e2515a31d3814cb364f 293 Pfam PF04055 Radical SAM superfamily 29 225 6.4E-14 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 M634_08780 cc0153d19cad1e2515a31d3814cb364f 293 Gene3D G3DSA:3.20.20.70 67 282 1.9E-32 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_08780 cc0153d19cad1e2515a31d3814cb364f 293 Gene3D G3DSA:3.20.20.70 7 66 7.5E-12 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_08780 cc0153d19cad1e2515a31d3814cb364f 293 Pfam PF13353 4Fe-4S single cluster domain 21 145 1.7E-7 T 12-10-2018 M634_08780 cc0153d19cad1e2515a31d3814cb364f 293 SUPERFAMILY SSF102114 83 278 3.73E-10 T 12-10-2018 M634_08780 cc0153d19cad1e2515a31d3814cb364f 293 SUPERFAMILY SSF54862 28 145 1.06E-16 T 12-10-2018 M634_08780 cc0153d19cad1e2515a31d3814cb364f 293 PIRSF PIRSF000371 1 293 3.7E-101 T 12-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 M634_08780 cc0153d19cad1e2515a31d3814cb364f 293 ProSitePatterns PS01087 Radical activating enzymes signature. 23 44 - T 12-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 M634_08780 cc0153d19cad1e2515a31d3814cb364f 293 TIGRFAM TIGR04041 activase_YjjW: glycine radical enzyme activase, YjjW family 10 288 1.8E-125 T 12-10-2018 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW M634_08780 cc0153d19cad1e2515a31d3814cb364f 293 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 51 62 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M634_14090 c165bb7151c7c146e561532d033937c1 159 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 84 158 2.1E-7 T 12-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 M634_14090 c165bb7151c7c146e561532d033937c1 159 SUPERFAMILY SSF54534 83 158 2.09E-10 T 12-10-2018 M634_14090 c165bb7151c7c146e561532d033937c1 159 Gene3D G3DSA:3.10.50.30 78 159 7.4E-7 T 12-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 M634_22030 5ad1b5cb7884386a4a7d3171a0bab430 324 SUPERFAMILY SSF53613 10 297 7.95E-71 T 12-10-2018 IPR029056 Ribokinase-like M634_22030 5ad1b5cb7884386a4a7d3171a0bab430 324 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 9 312 4.5E-103 T 12-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 M634_22030 5ad1b5cb7884386a4a7d3171a0bab430 324 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 9 312 5.6E-103 T 12-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 M634_22030 5ad1b5cb7884386a4a7d3171a0bab430 324 PIRSF PIRSF000535 6 315 2.1E-97 T 12-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 M634_22030 5ad1b5cb7884386a4a7d3171a0bab430 324 Gene3D G3DSA:3.40.1190.20 6 315 5.5E-97 T 12-10-2018 IPR029056 Ribokinase-like M634_22030 5ad1b5cb7884386a4a7d3171a0bab430 324 Pfam PF00294 pfkB family carbohydrate kinase 30 298 3.6E-52 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB M634_22030 5ad1b5cb7884386a4a7d3171a0bab430 324 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 43 67 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 M634_11750 3cde211e0469f1ef6730e2fd58a112fd 454 Pfam PF17200 Single Cache domain 2 45 192 1.2E-40 T 12-10-2018 IPR033480 Single Cache domain 2 M634_11750 3cde211e0469f1ef6730e2fd58a112fd 454 SUPERFAMILY SSF55874 321 443 2.88E-18 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_11750 3cde211e0469f1ef6730e2fd58a112fd 454 Gene3D G3DSA:3.30.450.20 28 203 6.8E-47 T 12-10-2018 M634_11750 3cde211e0469f1ef6730e2fd58a112fd 454 SMART SM01049 42 133 2.0E-31 T 12-10-2018 IPR033480 Single Cache domain 2 M634_11750 3cde211e0469f1ef6730e2fd58a112fd 454 Gene3D G3DSA:3.30.565.10 313 448 6.0E-29 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_11750 3cde211e0469f1ef6730e2fd58a112fd 454 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 446 4.6E-6 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_11750 3cde211e0469f1ef6730e2fd58a112fd 454 Pfam PF07730 Histidine kinase 250 315 5.0E-14 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 M634_11750 3cde211e0469f1ef6730e2fd58a112fd 454 PIRSF PIRSF037314 1 454 2.3E-191 T 12-10-2018 IPR017171 Signal transduction histidine kinase, MctS M634_11750 3cde211e0469f1ef6730e2fd58a112fd 454 SMART SM00387 353 447 9.7E-6 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_15265 708b7be94f5c961c4ea3cbda41c699d9 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 26.744 T 12-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 M634_15265 708b7be94f5c961c4ea3cbda41c699d9 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 126 3.2E-44 T 12-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 M634_15265 708b7be94f5c961c4ea3cbda41c699d9 126 Gene3D G3DSA:3.90.470.20 1 126 1.0E-41 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 M634_15265 708b7be94f5c961c4ea3cbda41c699d9 126 SUPERFAMILY SSF56214 3 125 1.27E-31 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 M634_15265 708b7be94f5c961c4ea3cbda41c699d9 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 122 4.7E-22 T 12-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 M634_15265 708b7be94f5c961c4ea3cbda41c699d9 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 126 2.4E-33 T 12-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 M634_15265 708b7be94f5c961c4ea3cbda41c699d9 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 87 8.0E-40 T 12-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 M634_20995 0884bc28d782e3666127e9be26be5e7a 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 267 6.7E-27 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_20995 0884bc28d782e3666127e9be26be5e7a 280 Gene3D G3DSA:1.10.3720.10 85 274 2.1E-34 T 12-10-2018 IPR035906 MetI-like superfamily M634_20995 0884bc28d782e3666127e9be26be5e7a 280 TIGRFAM TIGR03416 ABC_choXWV_perm: choline ABC transporter, permease protein 6 272 5.2E-127 T 12-10-2018 IPR017784 ABC transporter, choline, permease protein M634_20995 0884bc28d782e3666127e9be26be5e7a 280 SUPERFAMILY SSF161098 88 272 1.7E-39 T 12-10-2018 IPR035906 MetI-like superfamily M634_15035 5ec8eeacaae861cc2988db23d3c7136b 247 Gene3D G3DSA:3.40.1280.10 1 160 2.7E-67 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal M634_15035 5ec8eeacaae861cc2988db23d3c7136b 247 PIRSF PIRSF000386 1 246 1.1E-100 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 M634_15035 5ec8eeacaae861cc2988db23d3c7136b 247 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 234 2.3E-109 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 M634_15035 5ec8eeacaae861cc2988db23d3c7136b 247 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 7.9E-70 T 12-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 M634_15035 5ec8eeacaae861cc2988db23d3c7136b 247 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 247 117.9 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 M634_15035 5ec8eeacaae861cc2988db23d3c7136b 247 Gene3D G3DSA:1.10.1270.20 161 247 1.2E-34 T 12-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 M634_15035 5ec8eeacaae861cc2988db23d3c7136b 247 SUPERFAMILY SSF75217 1 245 2.09E-102 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases M634_11335 c485f63881b14a09353de180f2eca00e 2784 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 1499 1511 3.4E-5 T 12-10-2018 M634_11335 c485f63881b14a09353de180f2eca00e 2784 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 1443 1457 3.4E-5 T 12-10-2018 M634_11335 c485f63881b14a09353de180f2eca00e 2784 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 1511 1535 3.4E-5 T 12-10-2018 M634_11335 c485f63881b14a09353de180f2eca00e 2784 Pfam PF05175 Methyltransferase small domain 1442 1538 7.5E-5 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 M634_11335 c485f63881b14a09353de180f2eca00e 2784 SUPERFAMILY SSF53335 1353 1608 8.6E-26 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_11335 c485f63881b14a09353de180f2eca00e 2784 Gene3D G3DSA:3.40.50.150 1404 1647 2.6E-21 T 12-10-2018 M634_11335 c485f63881b14a09353de180f2eca00e 2784 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 1502 1508 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 M634_17110 1c8442da609ed8cc00bcb40600d7f56c 146 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 8 143 1.0E-29 T 12-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 M634_17110 1c8442da609ed8cc00bcb40600d7f56c 146 Pfam PF02050 Flagellar FliJ protein 23 133 2.2E-7 T 12-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 M634_05815 548f677a69d35fc60f787ac1e2dc2235 198 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 23 192 4.7E-33 T 12-10-2018 IPR018635 Uncharacterised protein family UPF0319 M634_05815 548f677a69d35fc60f787ac1e2dc2235 198 Hamap MF_00789 UPF0319 protein YccT [yccT]. 4 195 25.123 T 12-10-2018 IPR018635 Uncharacterised protein family UPF0319 M634_04900 0f972e050c4e96ab8f77ec61e305e70c 112 PRINTS PR00355 Adrenodoxin signature 42 52 3.2E-10 T 12-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 M634_04900 0f972e050c4e96ab8f77ec61e305e70c 112 PRINTS PR00355 Adrenodoxin signature 83 91 3.2E-10 T 12-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 M634_04900 0f972e050c4e96ab8f77ec61e305e70c 112 PRINTS PR00355 Adrenodoxin signature 60 74 3.2E-10 T 12-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 M634_04900 0f972e050c4e96ab8f77ec61e305e70c 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 91 4.6E-15 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 M634_04900 0f972e050c4e96ab8f77ec61e305e70c 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 110 2.5E-61 T 12-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 M634_04900 0f972e050c4e96ab8f77ec61e305e70c 112 Gene3D G3DSA:3.10.20.30 1 112 1.0E-36 T 12-10-2018 IPR012675 Beta-grasp domain superfamily M634_04900 0f972e050c4e96ab8f77ec61e305e70c 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 12-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 M634_04900 0f972e050c4e96ab8f77ec61e305e70c 112 SUPERFAMILY SSF54292 5 107 2.22E-32 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 M634_06165 38d89ab7c24cd624d812d1595a2fd38d 523 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 451 468 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 M634_06165 38d89ab7c24cd624d812d1595a2fd38d 523 SUPERFAMILY SSF55604 438 510 2.62E-20 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 M634_06165 38d89ab7c24cd624d812d1595a2fd38d 523 Pfam PF00367 phosphotransferase system, EIIB 440 473 2.9E-13 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 M634_06165 38d89ab7c24cd624d812d1595a2fd38d 523 Pfam PF02378 Phosphotransferase system, EIIC 11 353 1.1E-66 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 M634_06165 38d89ab7c24cd624d812d1595a2fd38d 523 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 411 498 1.7E-23 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 M634_06165 38d89ab7c24cd624d812d1595a2fd38d 523 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 509 2.6E-207 T 12-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 M634_06165 38d89ab7c24cd624d812d1595a2fd38d 523 Gene3D G3DSA:3.30.1360.60 434 514 5.4E-25 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 M634_10405 fe5473ae36603daab5656f44fffc05af 447 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 251 266 - T 12-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 M634_10405 fe5473ae36603daab5656f44fffc05af 447 SUPERFAMILY SSF55931 116 444 9.16E-86 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 M634_10405 fe5473ae36603daab5656f44fffc05af 447 SMART SM01230 113 370 8.0E-80 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 M634_10405 fe5473ae36603daab5656f44fffc05af 447 Gene3D G3DSA:3.30.590.10 117 446 3.4E-83 T 12-10-2018 M634_10405 fe5473ae36603daab5656f44fffc05af 447 Pfam PF00120 Glutamine synthetase, catalytic domain 117 442 8.2E-84 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 M634_10405 fe5473ae36603daab5656f44fffc05af 447 SUPERFAMILY SSF54368 16 109 3.79E-7 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 M634_20980 42eb928ec41cf10b164e13843918dfe2 486 Pfam PF00171 Aldehyde dehydrogenase family 18 474 5.1E-179 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 M634_20980 42eb928ec41cf10b164e13843918dfe2 486 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 274 285 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 M634_20980 42eb928ec41cf10b164e13843918dfe2 486 SUPERFAMILY SSF53720 4 480 9.69E-173 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 M634_20980 42eb928ec41cf10b164e13843918dfe2 486 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 246 253 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 M634_20980 42eb928ec41cf10b164e13843918dfe2 486 Gene3D G3DSA:3.40.309.10 253 446 9.5E-181 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 M634_20980 42eb928ec41cf10b164e13843918dfe2 486 Gene3D G3DSA:3.40.605.10 19 474 9.5E-181 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 M634_20980 42eb928ec41cf10b164e13843918dfe2 486 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 1 486 57.622 T 12-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 M634_20980 42eb928ec41cf10b164e13843918dfe2 486 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 7 472 1.7E-207 T 12-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 M634_00750 577ac6d0bdfb2925b3448222267c2a92 340 SUPERFAMILY SSF102114 102 323 2.49E-29 T 12-10-2018 M634_00750 577ac6d0bdfb2925b3448222267c2a92 340 PIRSF PIRSF004911 3 340 4.4E-119 T 12-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase M634_00750 577ac6d0bdfb2925b3448222267c2a92 340 Gene3D G3DSA:3.20.20.70 51 334 2.2E-94 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_00750 577ac6d0bdfb2925b3448222267c2a92 340 Pfam PF13353 4Fe-4S single cluster domain 114 183 1.9E-7 T 12-10-2018 M634_00750 577ac6d0bdfb2925b3448222267c2a92 340 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 16 335 6.9E-160 T 12-10-2018 IPR022462 Lysine-2,3-aminomutase-like M634_00750 577ac6d0bdfb2925b3448222267c2a92 340 TIGRFAM TIGR00238 TIGR00238: KamA family protein 13 328 2.8E-131 T 12-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase M634_00750 577ac6d0bdfb2925b3448222267c2a92 340 Pfam PF04055 Radical SAM superfamily 117 263 4.2E-10 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 M634_13525 dff045c1cb20c6f035a88be390ce1c3a 164 SMART SM00260 16 153 2.5E-50 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 M634_13525 dff045c1cb20c6f035a88be390ce1c3a 164 SUPERFAMILY SSF50341 15 158 9.29E-42 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 M634_13525 dff045c1cb20c6f035a88be390ce1c3a 164 Gene3D G3DSA:2.30.30.40 22 147 7.0E-43 T 12-10-2018 M634_13525 dff045c1cb20c6f035a88be390ce1c3a 164 Gene3D G3DSA:2.40.50.180 39 148 7.0E-43 T 12-10-2018 M634_13525 dff045c1cb20c6f035a88be390ce1c3a 164 Pfam PF01584 CheW-like domain 20 155 4.7E-40 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 M634_17065 ee95f2bb03865f54a9b3a9a795b5c06f 127 SUPERFAMILY SSF54593 1 126 6.04E-31 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M634_17065 ee95f2bb03865f54a9b3a9a795b5c06f 127 Gene3D G3DSA:3.10.180.10 7 126 2.1E-31 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M634_17065 ee95f2bb03865f54a9b3a9a795b5c06f 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 124 7.4E-19 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain M634_05155 e309a2f0dffa1ce907f4846e7e75063c 119 Gene3D G3DSA:3.30.1450.10 34 117 4.6E-25 T 12-10-2018 IPR037873 BamE-like M634_05155 e309a2f0dffa1ce907f4846e7e75063c 119 Pfam PF04355 SmpA / OmlA family 35 103 2.0E-25 T 12-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 M634_05155 e309a2f0dffa1ce907f4846e7e75063c 119 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 7 112 32.306 T 12-10-2018 IPR026592 Outer membrane protein assembly factor BamE M634_05765 c71cbf1a01dfb4b57b3994eccca25122 193 SMART SM00463 92 175 1.6E-15 T 12-10-2018 IPR002625 Smr domain M634_05765 c71cbf1a01dfb4b57b3994eccca25122 193 SUPERFAMILY SSF160443 93 175 3.27E-14 T 12-10-2018 IPR036063 Smr domain superfamily M634_05765 c71cbf1a01dfb4b57b3994eccca25122 193 Gene3D G3DSA:3.30.1370.110 47 181 2.2E-43 T 12-10-2018 M634_05765 c71cbf1a01dfb4b57b3994eccca25122 193 Pfam PF01713 Smr domain 95 175 2.8E-21 T 12-10-2018 IPR002625 Smr domain M634_11990 55fde02b0ebb5a85f517a84f34d40e6c 206 Pfam PF01300 Telomere recombination 23 198 7.1E-47 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 M634_11990 55fde02b0ebb5a85f517a84f34d40e6c 206 Gene3D G3DSA:3.90.870.10 1 205 9.0E-69 T 12-10-2018 M634_11990 55fde02b0ebb5a85f517a84f34d40e6c 206 SUPERFAMILY SSF55821 1 204 1.46E-64 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily M634_11990 55fde02b0ebb5a85f517a84f34d40e6c 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 8.7E-71 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 M634_24325 8e178094dbfd79b3fb6661fb0985c71c 171 PIRSF PIRSF030840 1 171 6.6E-64 T 12-10-2018 IPR010413 Heme utilization carrier protein HutX-like M634_24325 8e178094dbfd79b3fb6661fb0985c71c 171 TIGRFAM TIGR04108 HutX: putative heme utilization carrier protein HutX 14 165 5.1E-63 T 12-10-2018 IPR010413 Heme utilization carrier protein HutX-like M634_24325 8e178094dbfd79b3fb6661fb0985c71c 171 Pfam PF06228 Haem utilisation ChuX/HutX 28 165 1.3E-32 T 12-10-2018 IPR010413 Heme utilization carrier protein HutX-like M634_24325 8e178094dbfd79b3fb6661fb0985c71c 171 SUPERFAMILY SSF144064 2 167 6.67E-56 T 12-10-2018 M634_24325 8e178094dbfd79b3fb6661fb0985c71c 171 Gene3D G3DSA:3.40.1570.10 1 171 2.0E-60 T 12-10-2018 M634_11885 f69545c18eba41aabe9f2e345075c841 377 Pfam PF00268 Ribonucleotide reductase, small chain 34 333 5.0E-49 T 12-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 M634_11885 f69545c18eba41aabe9f2e345075c841 377 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 12-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 M634_11885 f69545c18eba41aabe9f2e345075c841 377 SUPERFAMILY SSF47240 3 341 8.71E-112 T 12-10-2018 IPR009078 Ferritin-like superfamily M634_11885 f69545c18eba41aabe9f2e345075c841 377 Gene3D G3DSA:1.10.620.20 2 341 3.1E-144 T 12-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 M634_07900 ad43b7e7aecdda80e9ef8cc55b5264fa 256 Pfam PF02754 Cysteine-rich domain 121 203 4.7E-8 T 12-10-2018 IPR004017 Cysteine-rich domain M634_07900 ad43b7e7aecdda80e9ef8cc55b5264fa 256 Pfam PF02754 Cysteine-rich domain 6 85 1.7E-6 T 12-10-2018 IPR004017 Cysteine-rich domain M634_13705 c144e7769858a522e8bb3165cce42d6f 377 PRINTS PR00207 Flagellin signature 37 54 1.5E-27 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 M634_13705 c144e7769858a522e8bb3165cce42d6f 377 PRINTS PR00207 Flagellin signature 111 134 1.5E-27 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 M634_13705 c144e7769858a522e8bb3165cce42d6f 377 PRINTS PR00207 Flagellin signature 76 95 1.5E-27 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 M634_13705 c144e7769858a522e8bb3165cce42d6f 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 293 376 9.8E-24 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 M634_13705 c144e7769858a522e8bb3165cce42d6f 377 SUPERFAMILY SSF64518 5 376 3.27E-97 T 12-10-2018 M634_13705 c144e7769858a522e8bb3165cce42d6f 377 Gene3D G3DSA:3.30.70.2120 174 275 1.7E-79 T 12-10-2018 M634_13705 c144e7769858a522e8bb3165cce42d6f 377 Gene3D G3DSA:1.20.1330.10 44 327 1.7E-79 T 12-10-2018 M634_13705 c144e7769858a522e8bb3165cce42d6f 377 Pfam PF07196 Flagellin hook IN motif 201 246 6.5E-11 T 12-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 M634_13705 c144e7769858a522e8bb3165cce42d6f 377 Gene3D G3DSA:1.10.8.410 328 376 2.7E-18 T 12-10-2018 M634_13705 c144e7769858a522e8bb3165cce42d6f 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 8.3E-45 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 M634_14710 f019e7982d442aec08b0239f7a90b76f 98 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 98 1.0E-44 T 12-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 M634_14710 f019e7982d442aec08b0239f7a90b76f 98 Gene3D G3DSA:3.30.110.60 1 98 7.2E-37 T 12-10-2018 IPR035920 YhbY-like superfamily M634_14710 f019e7982d442aec08b0239f7a90b76f 98 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 6.3E-37 T 12-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 M634_14710 f019e7982d442aec08b0239f7a90b76f 98 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 8.0E-21 T 12-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 M634_14710 f019e7982d442aec08b0239f7a90b76f 98 SMART SM01103 3 86 1.3E-41 T 12-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 M634_14710 f019e7982d442aec08b0239f7a90b76f 98 SUPERFAMILY SSF75471 1 94 5.89E-30 T 12-10-2018 IPR035920 YhbY-like superfamily M634_04920 9230a00b20a729cb4e7dca224f3636b0 375 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 5 353 71.98 T 12-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 M634_04920 9230a00b20a729cb4e7dca224f3636b0 375 Gene3D G3DSA:3.20.20.70 68 338 2.5E-112 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_04920 9230a00b20a729cb4e7dca224f3636b0 375 SUPERFAMILY SSF102114 103 312 3.27E-13 T 12-10-2018 M634_04920 9230a00b20a729cb4e7dca224f3636b0 375 PIRSF PIRSF006004 3 366 9.0E-145 T 12-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 M634_04920 9230a00b20a729cb4e7dca224f3636b0 375 Pfam PF04055 Radical SAM superfamily 109 283 1.7E-14 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 M634_04920 9230a00b20a729cb4e7dca224f3636b0 375 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 359 2.8E-161 T 12-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 M634_04920 9230a00b20a729cb4e7dca224f3636b0 375 Gene3D G3DSA:1.10.150.530 1 67 3.5E-26 T 12-10-2018 M634_21525 75817d014594a365eebc4a758bb34e74 999 ProSitePatterns PS00018 EF-hand calcium-binding domain. 232 244 - T 12-10-2018 IPR018247 EF-Hand 1, calcium-binding site M634_21525 75817d014594a365eebc4a758bb34e74 999 SUPERFAMILY SSF55486 284 354 6.9E-7 T 12-10-2018 M634_21525 75817d014594a365eebc4a758bb34e74 999 Pfam PF05547 Immune inhibitor A peptidase M6 150 364 4.1E-16 T 12-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 M634_21525 75817d014594a365eebc4a758bb34e74 999 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 133 420 1.5E-78 T 12-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 M634_21525 75817d014594a365eebc4a758bb34e74 999 PIRSF PIRSF036597 943 999 9.8E-6 T 12-10-2018 IPR012045 Peptidase M6, unassigned InhA-related M634_21525 75817d014594a365eebc4a758bb34e74 999 PIRSF PIRSF036597 1 959 0.0 T 12-10-2018 IPR012045 Peptidase M6, unassigned InhA-related M634_21525 75817d014594a365eebc4a758bb34e74 999 Gene3D G3DSA:2.60.40.10 869 951 2.2E-9 T 12-10-2018 IPR013783 Immunoglobulin-like fold M634_24085 3d95d54f04f6e99c32907483583c5616 308 Gene3D G3DSA:3.40.50.300 1 243 6.6E-73 T 12-10-2018 M634_24085 3d95d54f04f6e99c32907483583c5616 308 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_24085 3d95d54f04f6e99c32907483583c5616 308 SMART SM00382 30 212 5.0E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_24085 3d95d54f04f6e99c32907483583c5616 308 Pfam PF00005 ABC transporter 22 165 7.4E-36 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_24085 3d95d54f04f6e99c32907483583c5616 308 SUPERFAMILY SSF52540 4 227 3.22E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_23030 c4dc72c2b9af922a9b477283d512f526 1018 SUPERFAMILY SSF52540 1 999 3.29E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_23030 c4dc72c2b9af922a9b477283d512f526 1018 Gene3D G3DSA:3.40.50.300 1 232 1.6E-41 T 12-10-2018 M634_23030 c4dc72c2b9af922a9b477283d512f526 1018 Pfam PF13476 AAA domain 5 280 2.7E-21 T 12-10-2018 IPR038729 Rad50/SbcC-type AAA domain M634_23030 c4dc72c2b9af922a9b477283d512f526 1018 Pfam PF13558 Putative exonuclease SbcCD, C subunit 904 971 3.6E-12 T 12-10-2018 M634_19290 ecacf85e5cfd3e17e6d7d91bf4662281 183 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 182 7.6E-79 T 12-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ M634_19290 ecacf85e5cfd3e17e6d7d91bf4662281 183 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 24 182 7.4E-75 T 12-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ M634_17260 d9eee49e2d123a9256e0b0696c2c0bcd 181 Gene3D G3DSA:1.10.357.10 1 181 7.3E-47 T 12-10-2018 M634_17260 d9eee49e2d123a9256e0b0696c2c0bcd 181 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 54 1.1E-12 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M634_17260 d9eee49e2d123a9256e0b0696c2c0bcd 181 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 2.9E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M634_17260 d9eee49e2d123a9256e0b0696c2c0bcd 181 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 2.9E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M634_17260 d9eee49e2d123a9256e0b0696c2c0bcd 181 SUPERFAMILY SSF46689 3 72 7.48E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_17260 d9eee49e2d123a9256e0b0696c2c0bcd 181 SUPERFAMILY SSF48498 89 165 6.35E-8 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily M634_03320 d5416c7f0eac08b463d8687425d13580 63 SUPERFAMILY SSF46561 1 61 2.22E-23 T 12-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03320 d5416c7f0eac08b463d8687425d13580 63 Gene3D G3DSA:1.10.287.310 1 63 3.6E-31 T 12-10-2018 M634_03320 d5416c7f0eac08b463d8687425d13580 63 Pfam PF00831 Ribosomal L29 protein 4 60 3.7E-25 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03320 d5416c7f0eac08b463d8687425d13580 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 12-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03320 d5416c7f0eac08b463d8687425d13580 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 19.099 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03320 d5416c7f0eac08b463d8687425d13580 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 1.4E-23 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_11895 06684c5f9db80d630dfc2a3b05219238 410 Pfam PF00994 Probable molybdopterin binding domain 4 169 1.3E-28 T 12-10-2018 IPR001453 MoaB/Mog domain M634_11895 06684c5f9db80d630dfc2a3b05219238 410 SUPERFAMILY SSF53218 2 204 1.96E-33 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily M634_11895 06684c5f9db80d630dfc2a3b05219238 410 SUPERFAMILY SSF142433 252 386 6.41E-8 T 12-10-2018 IPR036653 CinA-like, C-terminal M634_11895 06684c5f9db80d630dfc2a3b05219238 410 PIRSF PIRSF006728 1 391 5.5E-117 T 12-10-2018 IPR008135 Competence-induced protein CinA M634_11895 06684c5f9db80d630dfc2a3b05219238 410 SMART SM00852 4 171 5.6E-30 T 12-10-2018 IPR001453 MoaB/Mog domain M634_11895 06684c5f9db80d630dfc2a3b05219238 410 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 410 103.279 T 12-10-2018 IPR008135 Competence-induced protein CinA M634_11895 06684c5f9db80d630dfc2a3b05219238 410 Gene3D G3DSA:3.40.980.10 1 171 1.9E-43 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily M634_11895 06684c5f9db80d630dfc2a3b05219238 410 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 2 403 2.2E-75 T 12-10-2018 IPR008135 Competence-induced protein CinA M634_12155 7ee51f669fb44feb7c27ca72af6e5c82 354 Pfam PF13437 HlyD family secretion protein 200 268 3.1E-6 T 12-10-2018 M634_12155 7ee51f669fb44feb7c27ca72af6e5c82 354 Gene3D G3DSA:1.10.287.470 77 199 2.0E-39 T 12-10-2018 M634_12155 7ee51f669fb44feb7c27ca72af6e5c82 354 Gene3D G3DSA:2.40.420.20 313 324 2.0E-39 T 12-10-2018 M634_12155 7ee51f669fb44feb7c27ca72af6e5c82 354 SUPERFAMILY SSF111369 178 253 1.1E-5 T 12-10-2018 M634_12155 7ee51f669fb44feb7c27ca72af6e5c82 354 Gene3D G3DSA:2.40.30.170 38 311 2.0E-39 T 12-10-2018 M634_12155 7ee51f669fb44feb7c27ca72af6e5c82 354 Gene3D G3DSA:2.40.50.100 43 234 2.0E-39 T 12-10-2018 M634_12155 7ee51f669fb44feb7c27ca72af6e5c82 354 Pfam PF13533 Biotin-lipoyl like 44 88 8.6E-17 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain M634_12155 7ee51f669fb44feb7c27ca72af6e5c82 354 SUPERFAMILY SSF111369 38 96 1.06E-9 T 12-10-2018 M634_12155 7ee51f669fb44feb7c27ca72af6e5c82 354 SUPERFAMILY SSF111369 109 166 3.14E-6 T 12-10-2018 M634_08440 be4cb704186f0136c73118abb1d2554f 177 SUPERFAMILY SSF52540 4 176 9.15E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_08440 be4cb704186f0136c73118abb1d2554f 177 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 4 174 3.2E-59 T 12-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 M634_08440 be4cb704186f0136c73118abb1d2554f 177 PIRSF PIRSF006135 1 177 3.4E-54 T 12-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 M634_08440 be4cb704186f0136c73118abb1d2554f 177 Gene3D G3DSA:3.40.50.300 3 176 2.9E-58 T 12-10-2018 M634_03380 cd99ea128a4656b285fc32fee62ce7bc 444 SUPERFAMILY SSF103491 15 425 5.62E-131 T 12-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 M634_03380 cd99ea128a4656b285fc32fee62ce7bc 444 Gene3D G3DSA:1.10.3370.10 10 430 5.6E-160 T 12-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 M634_03380 cd99ea128a4656b285fc32fee62ce7bc 444 PIRSF PIRSF004557 10 442 4.2E-122 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 M634_03380 cd99ea128a4656b285fc32fee62ce7bc 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 371 389 1.9E-95 T 12-10-2018 M634_03380 cd99ea128a4656b285fc32fee62ce7bc 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 403 421 1.9E-95 T 12-10-2018 M634_03380 cd99ea128a4656b285fc32fee62ce7bc 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 152 177 1.9E-95 T 12-10-2018 M634_03380 cd99ea128a4656b285fc32fee62ce7bc 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 1.9E-95 T 12-10-2018 M634_03380 cd99ea128a4656b285fc32fee62ce7bc 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 1.9E-95 T 12-10-2018 M634_03380 cd99ea128a4656b285fc32fee62ce7bc 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 316 338 1.9E-95 T 12-10-2018 M634_03380 cd99ea128a4656b285fc32fee62ce7bc 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 1.9E-95 T 12-10-2018 M634_03380 cd99ea128a4656b285fc32fee62ce7bc 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 178 201 1.9E-95 T 12-10-2018 M634_03380 cd99ea128a4656b285fc32fee62ce7bc 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 270 289 1.9E-95 T 12-10-2018 M634_03380 cd99ea128a4656b285fc32fee62ce7bc 444 Hamap MF_01465 Protein translocase subunit SecY [secY]. 9 434 29.21 T 12-10-2018 IPR026593 Protein translocase subunit SecY M634_03380 cd99ea128a4656b285fc32fee62ce7bc 444 Pfam PF00344 SecY translocase 76 418 8.6E-118 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 M634_03380 cd99ea128a4656b285fc32fee62ce7bc 444 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 430 3.4E-134 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 M634_03380 cd99ea128a4656b285fc32fee62ce7bc 444 ProSitePatterns PS00756 Protein secY signature 2. 171 188 - T 12-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 M634_03380 cd99ea128a4656b285fc32fee62ce7bc 444 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 12-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 M634_14680 01af59fcab5f09ea737b9502c1d2e447 112 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 2.0E-44 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 M634_14680 01af59fcab5f09ea737b9502c1d2e447 112 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 2.0E-44 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 M634_14680 01af59fcab5f09ea737b9502c1d2e447 112 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 2.0E-44 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 M634_14680 01af59fcab5f09ea737b9502c1d2e447 112 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 2.0E-44 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 M634_14680 01af59fcab5f09ea737b9502c1d2e447 112 Pfam PF03840 Preprotein translocase SecG subunit 4 71 6.2E-22 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 M634_14680 01af59fcab5f09ea737b9502c1d2e447 112 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 4.6E-25 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 M634_01635 287a445322cb18ba3ce0a637662362e6 313 Pfam PF03466 LysR substrate binding domain 97 308 7.9E-30 T 12-10-2018 IPR005119 LysR, substrate-binding M634_01635 287a445322cb18ba3ce0a637662362e6 313 Gene3D G3DSA:3.40.190.10 94 304 1.4E-59 T 12-10-2018 M634_01635 287a445322cb18ba3ce0a637662362e6 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 2.6E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_01635 287a445322cb18ba3ce0a637662362e6 313 SUPERFAMILY SSF46785 7 86 2.01E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_01635 287a445322cb18ba3ce0a637662362e6 313 Gene3D G3DSA:1.10.10.10 2 89 2.7E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_01635 287a445322cb18ba3ce0a637662362e6 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 8.5E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_01635 287a445322cb18ba3ce0a637662362e6 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 8.5E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_01635 287a445322cb18ba3ce0a637662362e6 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 8.5E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_01635 287a445322cb18ba3ce0a637662362e6 313 Gene3D G3DSA:3.40.190.10 182 280 1.4E-59 T 12-10-2018 M634_01635 287a445322cb18ba3ce0a637662362e6 313 SUPERFAMILY SSF53850 92 306 1.0E-49 T 12-10-2018 M634_06520 44d04e428faf2dcd5302104bd7cf581a 450 Gene3D G3DSA:3.30.465.10 350 435 9.8E-26 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 M634_06520 44d04e428faf2dcd5302104bd7cf581a 450 Gene3D G3DSA:3.10.580.10 202 349 5.5E-36 T 12-10-2018 M634_06520 44d04e428faf2dcd5302104bd7cf581a 450 SUPERFAMILY SSF54631 209 342 8.78E-23 T 12-10-2018 M634_06520 44d04e428faf2dcd5302104bd7cf581a 450 SMART SM01091 353 435 4.9E-25 T 12-10-2018 IPR005170 Transporter-associated domain M634_06520 44d04e428faf2dcd5302104bd7cf581a 450 Pfam PF03471 Transporter associated domain 354 434 5.0E-20 T 12-10-2018 IPR005170 Transporter-associated domain M634_06520 44d04e428faf2dcd5302104bd7cf581a 450 SUPERFAMILY SSF56176 354 433 7.63E-21 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 M634_06520 44d04e428faf2dcd5302104bd7cf581a 450 Pfam PF01595 Domain of unknown function DUF21 16 206 2.6E-42 T 12-10-2018 IPR002550 CNNM, transmembrane domain M634_16510 cd8f2c3755ff1e3fe8bd8e1f45d4f9e6 300 SUPERFAMILY SSF52540 36 251 5.31E-9 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_16510 cd8f2c3755ff1e3fe8bd8e1f45d4f9e6 300 Gene3D G3DSA:3.40.50.300 31 300 3.0E-5 T 12-10-2018 M634_16510 cd8f2c3755ff1e3fe8bd8e1f45d4f9e6 300 Pfam PF10364 Putative capsular polysaccharide synthesis protein 150 285 3.3E-58 T 12-10-2018 IPR018831 Uncharacterised protein family NKWYS M634_01325 2f7e05c6d74ba3cf48c4e9e3654767a8 73 TIGRFAM TIGR03853 matur_matur: putative metal-binding protein 3 73 2.6E-25 T 12-10-2018 IPR019620 Putative metal-binding protein M634_01325 2f7e05c6d74ba3cf48c4e9e3654767a8 73 Pfam PF10678 Protein of unknown function (DUF2492) 3 72 2.3E-24 T 12-10-2018 IPR019620 Putative metal-binding protein M634_03065 303091066ead543a63b269ba0953d61c 313 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 241 2.6E-44 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 M634_03065 303091066ead543a63b269ba0953d61c 313 Gene3D G3DSA:3.40.50.720 3 307 6.4E-115 T 12-10-2018 M634_03065 303091066ead543a63b269ba0953d61c 313 SUPERFAMILY SSF51735 1 308 1.89E-57 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_03065 303091066ead543a63b269ba0953d61c 313 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 313 46.338 T 12-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 M634_03065 303091066ead543a63b269ba0953d61c 313 Gene3D G3DSA:3.90.25.10 173 295 6.4E-115 T 12-10-2018 M634_03065 303091066ead543a63b269ba0953d61c 313 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 309 1.1E-125 T 12-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 M634_21870 f30c8546648c2ca0697eb8a206ac8557 168 SUPERFAMILY SSF56420 2 164 5.23E-55 T 12-10-2018 IPR036821 Peptide deformylase superfamily M634_21870 f30c8546648c2ca0697eb8a206ac8557 168 Hamap MF_00163 Peptide deformylase [def]. 2 162 29.656 T 12-10-2018 IPR023635 Peptide deformylase M634_21870 f30c8546648c2ca0697eb8a206ac8557 168 PIRSF PIRSF004749 1 168 9.9E-50 T 12-10-2018 IPR023635 Peptide deformylase M634_21870 f30c8546648c2ca0697eb8a206ac8557 168 Pfam PF01327 Polypeptide deformylase 4 152 5.7E-46 T 12-10-2018 IPR023635 Peptide deformylase M634_21870 f30c8546648c2ca0697eb8a206ac8557 168 PRINTS PR01576 Peptide deformylase signature 33 62 1.1E-29 T 12-10-2018 IPR023635 Peptide deformylase M634_21870 f30c8546648c2ca0697eb8a206ac8557 168 PRINTS PR01576 Peptide deformylase signature 89 100 1.1E-29 T 12-10-2018 IPR023635 Peptide deformylase M634_21870 f30c8546648c2ca0697eb8a206ac8557 168 PRINTS PR01576 Peptide deformylase signature 120 149 1.1E-29 T 12-10-2018 IPR023635 Peptide deformylase M634_21870 f30c8546648c2ca0697eb8a206ac8557 168 PRINTS PR01576 Peptide deformylase signature 101 119 1.1E-29 T 12-10-2018 IPR023635 Peptide deformylase M634_21870 f30c8546648c2ca0697eb8a206ac8557 168 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 5.6E-49 T 12-10-2018 IPR023635 Peptide deformylase M634_21870 f30c8546648c2ca0697eb8a206ac8557 168 Gene3D G3DSA:3.90.45.10 1 168 2.0E-61 T 12-10-2018 IPR036821 Peptide deformylase superfamily M634_15235 b91cc1658d562689e07dda0346698ee9 433 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 430 2.3E-137 T 12-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M634_15235 b91cc1658d562689e07dda0346698ee9 433 SUPERFAMILY SSF51604 143 428 8.06E-127 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily M634_15235 b91cc1658d562689e07dda0346698ee9 433 ProSitePatterns PS00164 Enolase signature. 340 353 - T 12-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_15235 b91cc1658d562689e07dda0346698ee9 433 SMART SM01193 4 134 1.6E-92 T 12-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M634_15235 b91cc1658d562689e07dda0346698ee9 433 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 429 2.2E-207 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M634_15235 b91cc1658d562689e07dda0346698ee9 433 PIRSF PIRSF001400 1 431 5.1E-192 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M634_15235 b91cc1658d562689e07dda0346698ee9 433 Gene3D G3DSA:3.20.20.120 128 433 1.1E-132 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily M634_15235 b91cc1658d562689e07dda0346698ee9 433 Gene3D G3DSA:3.30.390.10 1 127 6.2E-55 T 12-10-2018 IPR029017 Enolase-like, N-terminal M634_15235 b91cc1658d562689e07dda0346698ee9 433 SMART SM01192 143 431 6.4E-214 T 12-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M634_15235 b91cc1658d562689e07dda0346698ee9 433 Hamap MF_00318 Enolase [eno]. 2 417 44.504 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M634_15235 b91cc1658d562689e07dda0346698ee9 433 Pfam PF03952 Enolase, N-terminal domain 4 134 5.3E-58 T 12-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M634_15235 b91cc1658d562689e07dda0346698ee9 433 PRINTS PR00148 Enolase signature 369 386 4.9E-44 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M634_15235 b91cc1658d562689e07dda0346698ee9 433 PRINTS PR00148 Enolase signature 317 328 4.9E-44 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M634_15235 b91cc1658d562689e07dda0346698ee9 433 PRINTS PR00148 Enolase signature 165 178 4.9E-44 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M634_15235 b91cc1658d562689e07dda0346698ee9 433 PRINTS PR00148 Enolase signature 340 354 4.9E-44 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M634_15235 b91cc1658d562689e07dda0346698ee9 433 PRINTS PR00148 Enolase signature 37 51 4.9E-44 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M634_15235 b91cc1658d562689e07dda0346698ee9 433 PRINTS PR00148 Enolase signature 107 123 4.9E-44 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 M634_15235 b91cc1658d562689e07dda0346698ee9 433 SUPERFAMILY SSF54826 3 138 4.52E-56 T 12-10-2018 M634_00830 2440d6b700577b954c5d2a003e4bbe0b 483 SUPERFAMILY SSF48557 14 467 6.77E-145 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 M634_00830 2440d6b700577b954c5d2a003e4bbe0b 483 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 16 482 3.0E-253 T 12-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 M634_00830 2440d6b700577b954c5d2a003e4bbe0b 483 PRINTS PR00149 Fumarate lyase superfamily signature 193 211 4.2E-26 T 12-10-2018 IPR000362 Fumarate lyase family M634_00830 2440d6b700577b954c5d2a003e4bbe0b 483 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 4.2E-26 T 12-10-2018 IPR000362 Fumarate lyase family M634_00830 2440d6b700577b954c5d2a003e4bbe0b 483 PRINTS PR00149 Fumarate lyase superfamily signature 330 346 4.2E-26 T 12-10-2018 IPR000362 Fumarate lyase family M634_00830 2440d6b700577b954c5d2a003e4bbe0b 483 PRINTS PR00149 Fumarate lyase superfamily signature 284 311 4.2E-26 T 12-10-2018 IPR000362 Fumarate lyase family M634_00830 2440d6b700577b954c5d2a003e4bbe0b 483 Gene3D G3DSA:1.20.200.10 153 420 1.7E-113 T 12-10-2018 M634_00830 2440d6b700577b954c5d2a003e4bbe0b 483 Pfam PF10415 Fumarase C C-terminus 421 473 7.9E-18 T 12-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 M634_00830 2440d6b700577b954c5d2a003e4bbe0b 483 Gene3D G3DSA:1.10.275.10 16 152 7.3E-59 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal M634_00830 2440d6b700577b954c5d2a003e4bbe0b 483 ProSitePatterns PS00163 Fumarate lyases signature. 330 339 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 M634_00830 2440d6b700577b954c5d2a003e4bbe0b 483 Gene3D G3DSA:1.10.40.30 421 470 3.9E-28 T 12-10-2018 M634_00830 2440d6b700577b954c5d2a003e4bbe0b 483 Pfam PF00206 Lyase 23 355 1.7E-102 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal M634_07565 3ae67c425a3ec3d5b97aa73ad881039b 205 Gene3D G3DSA:1.10.3890.10 1 205 1.7E-77 T 12-10-2018 IPR035932 HflD-like superfamily M634_07565 3ae67c425a3ec3d5b97aa73ad881039b 205 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 203 35.816 T 12-10-2018 IPR007451 High frequency lysogenization protein HflD M634_07565 3ae67c425a3ec3d5b97aa73ad881039b 205 Pfam PF04356 Protein of unknown function (DUF489) 7 195 1.6E-76 T 12-10-2018 IPR007451 High frequency lysogenization protein HflD M634_07565 3ae67c425a3ec3d5b97aa73ad881039b 205 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 194 7.0E-107 T 12-10-2018 M634_07565 3ae67c425a3ec3d5b97aa73ad881039b 205 SUPERFAMILY SSF101322 2 204 6.54E-80 T 12-10-2018 IPR035932 HflD-like superfamily M634_22075 5634a05b22068732cd463b88317127f7 265 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 59 153 3.7E-26 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 M634_22075 5634a05b22068732cd463b88317127f7 265 SUPERFAMILY SSF161098 60 245 1.3E-45 T 12-10-2018 IPR035906 MetI-like superfamily M634_22075 5634a05b22068732cd463b88317127f7 265 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 258 4.4E-22 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_22075 5634a05b22068732cd463b88317127f7 265 Gene3D G3DSA:1.10.3720.10 48 260 5.3E-54 T 12-10-2018 IPR035906 MetI-like superfamily M634_05050 1c3169b07b4b4a947c36c385673595d9 567 Pfam PF00182 Chitinase class I 106 325 4.9E-30 T 12-10-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 M634_05050 1c3169b07b4b4a947c36c385673595d9 567 SUPERFAMILY SSF51055 430 479 1.24E-16 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M634_05050 1c3169b07b4b4a947c36c385673595d9 567 Gene3D G3DSA:1.10.530.10 105 346 1.0E-76 T 12-10-2018 M634_05050 1c3169b07b4b4a947c36c385673595d9 567 Gene3D G3DSA:2.10.10.20 434 480 2.8E-15 T 12-10-2018 M634_05050 1c3169b07b4b4a947c36c385673595d9 567 SUPERFAMILY SSF53955 87 350 2.0E-53 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily M634_05050 1c3169b07b4b4a947c36c385673595d9 567 SMART SM00495 436 478 1.2E-17 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M634_05050 1c3169b07b4b4a947c36c385673595d9 567 SMART SM00495 519 564 1.5 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M634_05050 1c3169b07b4b4a947c36c385673595d9 567 Gene3D G3DSA:3.30.20.10 178 248 1.0E-76 T 12-10-2018 M634_13340 1af9e6b2ae7b32fcfceb4880059f6503 420 Pfam PF02875 Mur ligase family, glutamate ligase domain 287 338 2.6E-5 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 M634_13340 1af9e6b2ae7b32fcfceb4880059f6503 420 PIRSF PIRSF001563 7 420 3.6E-104 T 12-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 M634_13340 1af9e6b2ae7b32fcfceb4880059f6503 420 SUPERFAMILY SSF53244 288 416 8.7E-32 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 M634_13340 1af9e6b2ae7b32fcfceb4880059f6503 420 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 12-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 M634_13340 1af9e6b2ae7b32fcfceb4880059f6503 420 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 414 2.1E-104 T 12-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 M634_13340 1af9e6b2ae7b32fcfceb4880059f6503 420 Gene3D G3DSA:3.90.190.20 288 420 4.2E-35 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 M634_13340 1af9e6b2ae7b32fcfceb4880059f6503 420 SUPERFAMILY SSF53623 15 285 1.13E-84 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 M634_13340 1af9e6b2ae7b32fcfceb4880059f6503 420 Pfam PF08245 Mur ligase middle domain 54 192 1.1E-6 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 M634_13340 1af9e6b2ae7b32fcfceb4880059f6503 420 Gene3D G3DSA:3.40.1190.10 1 287 1.3E-90 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 M634_12655 4b4bbb9eece386f5cbd54eca07e08cc4 151 Gene3D G3DSA:3.90.1170.40 1 149 3.4E-54 T 12-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 M634_12655 4b4bbb9eece386f5cbd54eca07e08cc4 151 SUPERFAMILY SSF54690 4 149 1.18E-55 T 12-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 M634_12655 4b4bbb9eece386f5cbd54eca07e08cc4 151 Pfam PF02391 MoaE protein 8 119 5.1E-37 T 12-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 M634_09860 3ec0fc925bf4fb21884d2145764384a4 88 Pfam PF11173 Protein of unknown function (DUF2960) 1 77 6.5E-36 T 12-10-2018 IPR021343 Protein of unknown function DUF2960 M634_01475 40325a2d69340f4ca1b5051f2e3a523c 393 Gene3D G3DSA:1.25.40.10 204 393 4.9E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_01475 40325a2d69340f4ca1b5051f2e3a523c 393 SMART SM00028 327 360 0.0011 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_01475 40325a2d69340f4ca1b5051f2e3a523c 393 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 2 386 1.9E-110 T 12-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 M634_01475 40325a2d69340f4ca1b5051f2e3a523c 393 Pfam PF07219 HemY protein N-terminus 26 132 1.9E-27 T 12-10-2018 IPR010817 HemY, N-terminal M634_01475 40325a2d69340f4ca1b5051f2e3a523c 393 SUPERFAMILY SSF48452 85 361 3.75E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_03880 a07e1916fbcbb4729b429ce31f084d2d 66 SUPERFAMILY SSF46955 6 59 1.21E-6 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily M634_03880 a07e1916fbcbb4729b429ce31f084d2d 66 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 5 55 7.0E-11 T 12-10-2018 IPR010260 DNA-binding transcriptional activator AlpA M634_06110 7e347a8856ffe6fd27a0397149547c84 171 ProDom PD016359 TRANSMEMBRANE TOXS REGULATORY MEMBRANE PERIPLASMIC 1 171 1.0E-94 T 12-10-2018 IPR035288 Trans-membrane regulatory protein ToxS GO:0016021 M634_06110 7e347a8856ffe6fd27a0397149547c84 171 Pfam PF17323 Trans-membrane regulatory protein ToxS 21 169 5.4E-70 T 12-10-2018 IPR035288 Trans-membrane regulatory protein ToxS GO:0016021 M634_06750 d4d6c226666279ba575388a3d08c7c4b 191 Gene3D G3DSA:2.40.160.20 12 188 5.9E-10 T 12-10-2018 M634_06750 d4d6c226666279ba575388a3d08c7c4b 191 Pfam PF13505 Outer membrane protein beta-barrel domain 6 191 8.6E-22 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel M634_06750 d4d6c226666279ba575388a3d08c7c4b 191 SUPERFAMILY SSF56925 31 191 2.88E-13 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel M634_14180 66d4202dad9f3c2486474466ba9ad5de 219 Gene3D G3DSA:1.10.10.1320 1 103 1.3E-13 T 12-10-2018 M634_14180 66d4202dad9f3c2486474466ba9ad5de 219 Pfam PF12973 ChrR Cupin-like domain 127 193 6.8E-14 T 12-10-2018 IPR025979 ChrR-like cupin domain M634_14180 66d4202dad9f3c2486474466ba9ad5de 219 SUPERFAMILY SSF51182 113 203 2.9E-12 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily M634_14180 66d4202dad9f3c2486474466ba9ad5de 219 TIGRFAM TIGR02451 anti_sig_ChrR: anti-sigma factor, putative, ChrR family 3 216 1.8E-74 T 12-10-2018 IPR012807 Anti-sigma factor ChrR, putative M634_14180 66d4202dad9f3c2486474466ba9ad5de 219 Gene3D G3DSA:2.60.120.10 108 197 1.4E-24 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M634_04570 ee7e8c24aef2ffa31ccf5acfa56a696f 556 Pfam PF06580 Histidine kinase 366 444 1.6E-26 T 12-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 M634_04570 ee7e8c24aef2ffa31ccf5acfa56a696f 556 Pfam PF07694 5TMR of 5TMR-LYT 26 194 2.8E-59 T 12-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 M634_04570 ee7e8c24aef2ffa31ccf5acfa56a696f 556 Gene3D G3DSA:3.30.450.40 226 352 1.9E-7 T 12-10-2018 IPR029016 GAF-like domain superfamily M634_04570 ee7e8c24aef2ffa31ccf5acfa56a696f 556 Gene3D G3DSA:3.30.565.10 419 554 1.0E-12 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_04570 ee7e8c24aef2ffa31ccf5acfa56a696f 556 SUPERFAMILY SSF55781 227 351 4.49E-7 T 12-10-2018 M634_04570 ee7e8c24aef2ffa31ccf5acfa56a696f 556 SUPERFAMILY SSF55874 428 524 2.46E-11 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_10670 1ee7baa90f9422f044446f01a2901f0a 283 Pfam PF00665 Integrase core domain 121 234 1.1E-32 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M634_10670 1ee7baa90f9422f044446f01a2901f0a 283 Gene3D G3DSA:3.30.420.10 118 271 3.3E-18 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M634_10670 1ee7baa90f9422f044446f01a2901f0a 283 SUPERFAMILY SSF53098 115 277 4.1E-42 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M634_10670 1ee7baa90f9422f044446f01a2901f0a 283 Pfam PF13276 HTH-like domain 42 96 2.1E-9 T 12-10-2018 IPR025948 HTH-like domain M634_02885 1ee7baa90f9422f044446f01a2901f0a 283 Pfam PF00665 Integrase core domain 121 234 1.1E-32 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M634_02885 1ee7baa90f9422f044446f01a2901f0a 283 Gene3D G3DSA:3.30.420.10 118 271 3.3E-18 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M634_02885 1ee7baa90f9422f044446f01a2901f0a 283 SUPERFAMILY SSF53098 115 277 4.1E-42 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M634_02885 1ee7baa90f9422f044446f01a2901f0a 283 Pfam PF13276 HTH-like domain 42 96 2.1E-9 T 12-10-2018 IPR025948 HTH-like domain M634_10960 1ee7baa90f9422f044446f01a2901f0a 283 Pfam PF00665 Integrase core domain 121 234 1.1E-32 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M634_10960 1ee7baa90f9422f044446f01a2901f0a 283 Gene3D G3DSA:3.30.420.10 118 271 3.3E-18 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M634_10960 1ee7baa90f9422f044446f01a2901f0a 283 SUPERFAMILY SSF53098 115 277 4.1E-42 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M634_10960 1ee7baa90f9422f044446f01a2901f0a 283 Pfam PF13276 HTH-like domain 42 96 2.1E-9 T 12-10-2018 IPR025948 HTH-like domain M634_18670 d7dc0a88bd90d7667168107c44b6fb36 175 SUPERFAMILY SSF55729 1 155 7.32E-32 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_18670 d7dc0a88bd90d7667168107c44b6fb36 175 Gene3D G3DSA:3.40.630.30 1 164 4.8E-31 T 12-10-2018 M634_18670 d7dc0a88bd90d7667168107c44b6fb36 175 Pfam PF00583 Acetyltransferase (GNAT) family 44 139 7.6E-16 T 12-10-2018 IPR000182 GNAT domain M634_02075 935d3acfe2e992a6ee412280b45a887d 364 SMART SM00257 39 87 1.8E-4 T 12-10-2018 IPR018392 LysM domain M634_02075 935d3acfe2e992a6ee412280b45a887d 364 SUPERFAMILY SSF54106 38 86 8.89E-7 T 12-10-2018 M634_02075 935d3acfe2e992a6ee412280b45a887d 364 Pfam PF01476 LysM domain 40 85 2.2E-12 T 12-10-2018 IPR018392 LysM domain M634_02075 935d3acfe2e992a6ee412280b45a887d 364 Gene3D G3DSA:3.10.350.10 38 85 1.5E-14 T 12-10-2018 IPR036779 LysM domain superfamily M634_06820 17cf44a9f617b6c8f226a989d36b52d9 768 SUPERFAMILY SSF81653 265 362 4.32E-22 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 M634_06820 17cf44a9f617b6c8f226a989d36b52d9 768 Pfam PF00403 Heavy-metal-associated domain 77 126 5.7E-11 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 M634_06820 17cf44a9f617b6c8f226a989d36b52d9 768 SUPERFAMILY SSF56784 462 757 6.05E-50 T 12-10-2018 IPR036412 HAD-like superfamily M634_06820 17cf44a9f617b6c8f226a989d36b52d9 768 Pfam PF00122 E1-E2 ATPase 263 443 4.0E-50 T 12-10-2018 M634_06820 17cf44a9f617b6c8f226a989d36b52d9 768 Gene3D G3DSA:2.70.150.20 262 367 1.1E-31 T 12-10-2018 M634_06820 17cf44a9f617b6c8f226a989d36b52d9 768 Gene3D G3DSA:3.40.50.1000 444 709 6.8E-82 T 12-10-2018 IPR023214 HAD superfamily M634_06820 17cf44a9f617b6c8f226a989d36b52d9 768 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 465 471 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 M634_06820 17cf44a9f617b6c8f226a989d36b52d9 768 ProSitePatterns PS01047 Heavy-metal-associated domain. 77 106 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 M634_06820 17cf44a9f617b6c8f226a989d36b52d9 768 Gene3D G3DSA:3.30.70.100 73 137 1.0E-11 T 12-10-2018 M634_06820 17cf44a9f617b6c8f226a989d36b52d9 768 SUPERFAMILY SSF55008 74 137 8.77E-13 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 M634_06820 17cf44a9f617b6c8f226a989d36b52d9 768 SUPERFAMILY SSF81665 215 745 5.49E-20 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 M634_06820 17cf44a9f617b6c8f226a989d36b52d9 768 Gene3D G3DSA:3.40.1110.10 474 591 6.8E-82 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 M634_06820 17cf44a9f617b6c8f226a989d36b52d9 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 606 616 3.2E-27 T 12-10-2018 M634_06820 17cf44a9f617b6c8f226a989d36b52d9 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 463 477 3.2E-27 T 12-10-2018 M634_06820 17cf44a9f617b6c8f226a989d36b52d9 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 584 595 3.2E-27 T 12-10-2018 M634_06820 17cf44a9f617b6c8f226a989d36b52d9 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 657 676 3.2E-27 T 12-10-2018 M634_06820 17cf44a9f617b6c8f226a989d36b52d9 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 312 326 3.2E-27 T 12-10-2018 M634_06820 17cf44a9f617b6c8f226a989d36b52d9 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 680 692 3.2E-27 T 12-10-2018 M634_06820 17cf44a9f617b6c8f226a989d36b52d9 768 PRINTS PR00941 Cadmium-transporting ATPase signature 86 107 6.7E-8 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 M634_06820 17cf44a9f617b6c8f226a989d36b52d9 768 PRINTS PR00941 Cadmium-transporting ATPase signature 347 361 6.7E-8 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 M634_06820 17cf44a9f617b6c8f226a989d36b52d9 768 PRINTS PR00941 Cadmium-transporting ATPase signature 247 267 6.7E-8 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 M634_06820 17cf44a9f617b6c8f226a989d36b52d9 768 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 212 759 3.1E-175 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 M634_06820 17cf44a9f617b6c8f226a989d36b52d9 768 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 212 522 6.1E-97 T 12-10-2018 M634_06820 17cf44a9f617b6c8f226a989d36b52d9 768 Pfam PF00702 haloacid dehalogenase-like hydrolase 461 669 1.7E-37 T 12-10-2018 M634_06820 17cf44a9f617b6c8f226a989d36b52d9 768 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 235 736 6.0E-85 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 M634_14790 5edda75e1d2ef7cc165886609aa8f9f4 560 Gene3D G3DSA:3.40.190.10 46 543 1.6E-195 T 12-10-2018 M634_14790 5edda75e1d2ef7cc165886609aa8f9f4 560 Gene3D G3DSA:3.10.105.10 272 519 1.6E-195 T 12-10-2018 M634_14790 5edda75e1d2ef7cc165886609aa8f9f4 560 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 446 9.8E-76 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain M634_14790 5edda75e1d2ef7cc165886609aa8f9f4 560 SUPERFAMILY SSF53850 42 544 2.95E-107 T 12-10-2018 M634_14790 5edda75e1d2ef7cc165886609aa8f9f4 560 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 84 106 - T 12-10-2018 IPR023765 Solute-binding protein family 5, conserved site M634_14790 5edda75e1d2ef7cc165886609aa8f9f4 560 PIRSF PIRSF002741 5 542 3.9E-68 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 M634_14790 5edda75e1d2ef7cc165886609aa8f9f4 560 Gene3D G3DSA:3.90.76.10 66 172 1.6E-195 T 12-10-2018 M634_17625 69214cdb230d12f62c8110fb1b2be657 436 Gene3D G3DSA:1.20.1740.10 1 435 4.5E-62 T 12-10-2018 M634_17625 69214cdb230d12f62c8110fb1b2be657 436 Pfam PF13520 Amino acid permease 9 414 2.1E-46 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 M634_17625 69214cdb230d12f62c8110fb1b2be657 436 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 1 430 7.9E-126 T 12-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 M634_17625 69214cdb230d12f62c8110fb1b2be657 436 TIGRFAM TIGR04299 antiport_PotE: putrescine-ornithine antiporter 4 431 5.1E-202 T 12-10-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 M634_17625 69214cdb230d12f62c8110fb1b2be657 436 Hamap MF_02073 Putrescine transporter PotE [potE]. 8 435 34.557 T 12-10-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 M634_17625 69214cdb230d12f62c8110fb1b2be657 436 PIRSF PIRSF006060 1 432 4.2E-52 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 M634_08705 5cd7e582ed202e5e88434fda7df5d9ed 741 Gene3D G3DSA:2.40.50.140 664 740 1.6E-11 T 12-10-2018 M634_08705 5cd7e582ed202e5e88434fda7df5d9ed 741 Pfam PF00773 RNB domain 261 593 2.5E-107 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 M634_08705 5cd7e582ed202e5e88434fda7df5d9ed 741 Gene3D G3DSA:2.40.50.140 65 148 1.5E-13 T 12-10-2018 M634_08705 5cd7e582ed202e5e88434fda7df5d9ed 741 TIGRFAM TIGR02063 RNase_R: ribonuclease R 20 739 2.9E-226 T 12-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 M634_08705 5cd7e582ed202e5e88434fda7df5d9ed 741 SUPERFAMILY SSF50249 222 658 2.61E-135 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_08705 5cd7e582ed202e5e88434fda7df5d9ed 741 SMART SM00316 660 741 1.0E-4 T 12-10-2018 IPR022967 RNA-binding domain, S1 M634_08705 5cd7e582ed202e5e88434fda7df5d9ed 741 SUPERFAMILY SSF50249 665 736 8.17E-12 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_08705 5cd7e582ed202e5e88434fda7df5d9ed 741 SUPERFAMILY SSF50249 143 236 3.6E-9 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_08705 5cd7e582ed202e5e88434fda7df5d9ed 741 SMART SM00357 87 150 0.0035 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 M634_08705 5cd7e582ed202e5e88434fda7df5d9ed 741 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 68 739 1.8E-196 T 12-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 M634_08705 5cd7e582ed202e5e88434fda7df5d9ed 741 Hamap MF_01895 Ribonuclease R [rnr]. 39 741 50.027 T 12-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 M634_08705 5cd7e582ed202e5e88434fda7df5d9ed 741 SMART SM00955 261 594 4.4E-171 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 M634_08705 5cd7e582ed202e5e88434fda7df5d9ed 741 ProSitePatterns PS01175 Ribonuclease II family signature. 561 585 - T 12-10-2018 IPR022966 Ribonuclease II/R, conserved site M634_08705 5cd7e582ed202e5e88434fda7df5d9ed 741 Pfam PF08206 Ribonuclease B OB domain 88 145 1.2E-14 T 12-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain M634_08705 5cd7e582ed202e5e88434fda7df5d9ed 741 Pfam PF00575 S1 RNA binding domain 658 739 1.3E-9 T 12-10-2018 IPR003029 S1 domain GO:0003676 M634_08705 5cd7e582ed202e5e88434fda7df5d9ed 741 SUPERFAMILY SSF50249 68 148 2.74E-13 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_19730 6a2de3b7b88f7bc1d7323cf13836b13d 302 SUPERFAMILY SSF103481 181 281 8.37E-12 T 12-10-2018 M634_19730 6a2de3b7b88f7bc1d7323cf13836b13d 302 SUPERFAMILY SSF103481 42 142 6.54E-15 T 12-10-2018 M634_19730 6a2de3b7b88f7bc1d7323cf13836b13d 302 Pfam PF00892 EamA-like transporter family 9 138 1.5E-11 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M634_24040 388da004db2e9672218c75ffc30bfd27 113 Pfam PF01022 Bacterial regulatory protein, arsR family 35 84 6.8E-12 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M634_24040 388da004db2e9672218c75ffc30bfd27 113 SMART SM00418 28 110 8.1E-11 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M634_24040 388da004db2e9672218c75ffc30bfd27 113 Gene3D G3DSA:1.10.10.10 9 111 7.7E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_24040 388da004db2e9672218c75ffc30bfd27 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 30 45 8.4E-8 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M634_24040 388da004db2e9672218c75ffc30bfd27 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 66 81 8.4E-8 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M634_24040 388da004db2e9672218c75ffc30bfd27 113 SUPERFAMILY SSF46785 19 111 9.94E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_23660 6e230b89db891df9cb1485a26e1a6e40 656 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 5 648 1.3E-233 T 12-10-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 M634_23660 6e230b89db891df9cb1485a26e1a6e40 656 Pfam PF00501 AMP-binding enzyme 104 532 5.1E-45 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 M634_23660 6e230b89db891df9cb1485a26e1a6e40 656 ProSitePatterns PS00455 Putative AMP-binding domain signature. 277 288 - T 12-10-2018 IPR020845 AMP-binding, conserved site M634_23660 6e230b89db891df9cb1485a26e1a6e40 656 Gene3D G3DSA:3.30.300.30 532 655 9.7E-16 T 12-10-2018 M634_23660 6e230b89db891df9cb1485a26e1a6e40 656 SUPERFAMILY SSF56801 30 651 1.31E-122 T 12-10-2018 M634_23660 6e230b89db891df9cb1485a26e1a6e40 656 Gene3D G3DSA:3.40.50.12780 90 530 6.7E-56 T 12-10-2018 M634_12265 63b7048c9283f1bc096f40698a43f28a 1030 SUPERFAMILY SSF50692 881 1003 6.1E-22 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily M634_12265 63b7048c9283f1bc096f40698a43f28a 1030 SUPERFAMILY SSF53706 69 882 1.06E-116 T 12-10-2018 M634_12265 63b7048c9283f1bc096f40698a43f28a 1030 Pfam PF00384 Molybdopterin oxidoreductase 244 697 8.8E-22 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M634_12265 63b7048c9283f1bc096f40698a43f28a 1030 Pfam PF01568 Molydopterin dinucleotide binding domain 904 997 9.5E-11 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 M634_12265 63b7048c9283f1bc096f40698a43f28a 1030 SMART SM00926 72 154 3.2E-15 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M634_12265 63b7048c9283f1bc096f40698a43f28a 1030 Gene3D G3DSA:3.40.50.740 71 994 1.0E-88 T 12-10-2018 M634_04455 4f82e29c9f5340441911e9efb49f6ba3 444 Gene3D G3DSA:1.10.8.60 310 386 7.2E-23 T 12-10-2018 M634_04455 4f82e29c9f5340441911e9efb49f6ba3 444 SMART SM00382 166 306 0.0029 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_04455 4f82e29c9f5340441911e9efb49f6ba3 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 402 419 2.7E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M634_04455 4f82e29c9f5340441911e9efb49f6ba3 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 419 439 2.7E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M634_04455 4f82e29c9f5340441911e9efb49f6ba3 444 SUPERFAMILY SSF52540 146 380 4.54E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_04455 4f82e29c9f5340441911e9efb49f6ba3 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site M634_04455 4f82e29c9f5340441911e9efb49f6ba3 444 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 170 183 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M634_04455 4f82e29c9f5340441911e9efb49f6ba3 444 Pfam PF02954 Bacterial regulatory protein, Fis family 396 435 3.7E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M634_04455 4f82e29c9f5340441911e9efb49f6ba3 444 Gene3D G3DSA:3.40.50.300 145 309 1.6E-39 T 12-10-2018 M634_04455 4f82e29c9f5340441911e9efb49f6ba3 444 Pfam PF00158 Sigma-54 interaction domain 146 305 2.4E-37 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 M634_04455 4f82e29c9f5340441911e9efb49f6ba3 444 SUPERFAMILY SSF46689 352 438 5.38E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_04455 4f82e29c9f5340441911e9efb49f6ba3 444 Gene3D G3DSA:1.10.10.60 387 440 1.0E-12 T 12-10-2018 M634_04455 4f82e29c9f5340441911e9efb49f6ba3 444 SUPERFAMILY SSF52172 27 190 1.39E-7 T 12-10-2018 IPR011006 CheY-like superfamily M634_22355 9688ed51eeb4528c69d22b0f10553ca1 311 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 10 292 6.9E-81 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B M634_22355 9688ed51eeb4528c69d22b0f10553ca1 311 SMART SM00797 27 308 2.6E-140 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B M634_22355 9688ed51eeb4528c69d22b0f10553ca1 311 SUPERFAMILY SSF50891 184 294 6.07E-10 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily M634_22355 9688ed51eeb4528c69d22b0f10553ca1 311 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 28 291 6.0E-86 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B M634_22355 9688ed51eeb4528c69d22b0f10553ca1 311 Gene3D G3DSA:2.40.100.10 182 309 1.7E-41 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily M634_03340 995258917665b7f2c876eb4d7e2c5d48 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 12-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03340 995258917665b7f2c876eb4d7e2c5d48 179 PIRSF PIRSF002161 1 179 5.7E-67 T 12-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03340 995258917665b7f2c876eb4d7e2c5d48 179 Gene3D G3DSA:3.30.1440.10 1 179 6.4E-81 T 12-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03340 995258917665b7f2c876eb4d7e2c5d48 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 7.1E-41 T 12-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03340 995258917665b7f2c876eb4d7e2c5d48 179 Pfam PF00281 Ribosomal protein L5 24 80 2.4E-29 T 12-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03340 995258917665b7f2c876eb4d7e2c5d48 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 45.054 T 12-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_03340 995258917665b7f2c876eb4d7e2c5d48 179 SUPERFAMILY SSF55282 4 179 1.44E-78 T 12-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_05530 51363ff43e561d81f80806e0335ef16f 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 5.5E-39 T 12-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS M634_05530 51363ff43e561d81f80806e0335ef16f 105 SUPERFAMILY SSF81301 5 105 3.6E-38 T 12-10-2018 M634_05530 51363ff43e561d81f80806e0335ef16f 105 Gene3D G3DSA:3.30.460.10 2 105 2.4E-37 T 12-10-2018 M634_05530 51363ff43e561d81f80806e0335ef16f 105 Pfam PF02410 Ribosomal silencing factor during starvation 11 104 3.7E-28 T 12-10-2018 M634_05530 51363ff43e561d81f80806e0335ef16f 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 2 105 25.401 T 12-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS M634_21875 9da038f3d2cba9d8a073ceedb357594d 135 SUPERFAMILY SSF46955 1 122 1.28E-23 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily M634_21875 9da038f3d2cba9d8a073ceedb357594d 135 Gene3D G3DSA:1.10.1660.10 1 119 1.0E-24 T 12-10-2018 M634_21875 9da038f3d2cba9d8a073ceedb357594d 135 Pfam PF13411 MerR HTH family regulatory protein 1 68 1.9E-11 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M634_21875 9da038f3d2cba9d8a073ceedb357594d 135 SMART SM00422 1 69 1.9E-11 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M634_20675 d75b72f3fb980cf2e9cdbbeb2d776ea7 430 Gene3D G3DSA:3.10.50.10 311 389 2.3E-120 T 12-10-2018 IPR029070 Chitinase insertion domain superfamily M634_20675 d75b72f3fb980cf2e9cdbbeb2d776ea7 430 ProSitePatterns PS01095 Chitinases family 18 active site. 168 176 - T 12-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 M634_20675 d75b72f3fb980cf2e9cdbbeb2d776ea7 430 SUPERFAMILY SSF54556 312 386 5.5E-18 T 12-10-2018 IPR029070 Chitinase insertion domain superfamily M634_20675 d75b72f3fb980cf2e9cdbbeb2d776ea7 430 Gene3D G3DSA:3.20.20.80 22 421 2.3E-120 T 12-10-2018 M634_20675 d75b72f3fb980cf2e9cdbbeb2d776ea7 430 SMART SM00636 22 415 4.5E-108 T 12-10-2018 IPR011583 Chitinase II GO:0008061 M634_20675 d75b72f3fb980cf2e9cdbbeb2d776ea7 430 SUPERFAMILY SSF51445 18 417 2.88E-80 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M634_20675 d75b72f3fb980cf2e9cdbbeb2d776ea7 430 Pfam PF00704 Glycosyl hydrolases family 18 24 415 7.9E-81 T 12-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 M634_00685 9377db12b0a1b3e6406373358133bae8 273 SMART SM00971 9 113 6.0E-59 T 12-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 M634_00685 9377db12b0a1b3e6406373358133bae8 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 112 4.4E-37 T 12-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 M634_00685 9377db12b0a1b3e6406373358133bae8 273 Gene3D G3DSA:1.10.3130.10 1 142 3.6E-52 T 12-10-2018 M634_00685 9377db12b0a1b3e6406373358133bae8 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 3.6E-9 T 12-10-2018 IPR001451 Hexapeptide repeat M634_00685 9377db12b0a1b3e6406373358133bae8 273 SUPERFAMILY SSF51161 8 258 3.97E-63 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily M634_00685 9377db12b0a1b3e6406373358133bae8 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 82 242 2.5E-74 T 12-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 M634_00685 9377db12b0a1b3e6406373358133bae8 273 Gene3D G3DSA:2.160.10.10 143 273 4.7E-37 T 12-10-2018 M634_00685 9377db12b0a1b3e6406373358133bae8 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 M634_00685 9377db12b0a1b3e6406373358133bae8 273 PIRSF PIRSF000441 7 72 89.0 T 12-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 M634_00685 9377db12b0a1b3e6406373358133bae8 273 PIRSF PIRSF000441 75 266 1.5E-55 T 12-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 M634_22645 8aa5ae14cf49fb7d29bd89cff1c64d57 156 PIRSF PIRSF000368 1 156 1.8E-60 T 12-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 M634_22645 8aa5ae14cf49fb7d29bd89cff1c64d57 156 Pfam PF13353 4Fe-4S single cluster domain 12 151 1.3E-52 T 12-10-2018 M634_22645 8aa5ae14cf49fb7d29bd89cff1c64d57 156 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 12-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 M634_22645 8aa5ae14cf49fb7d29bd89cff1c64d57 156 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 2 152 2.7E-62 T 12-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 M634_22645 8aa5ae14cf49fb7d29bd89cff1c64d57 156 SUPERFAMILY SSF102114 23 117 3.79E-8 T 12-10-2018 M634_22645 8aa5ae14cf49fb7d29bd89cff1c64d57 156 Gene3D G3DSA:3.20.20.70 2 156 4.1E-23 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_04015 7f3a1e8c6677e3b271593c0a371360ad 511 Pfam PF05235 CHAD domain 236 420 4.9E-8 T 12-10-2018 IPR007899 CHAD domain M634_04015 7f3a1e8c6677e3b271593c0a371360ad 511 SUPERFAMILY SSF55154 1 224 7.03E-52 T 12-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 M634_04015 7f3a1e8c6677e3b271593c0a371360ad 511 SMART SM01118 2 208 1.5E-42 T 12-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 M634_04015 7f3a1e8c6677e3b271593c0a371360ad 511 Gene3D G3DSA:2.40.320.10 1 204 1.4E-35 T 12-10-2018 M634_04015 7f3a1e8c6677e3b271593c0a371360ad 511 Pfam PF01928 CYTH domain 3 202 1.6E-32 T 12-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 M634_04015 7f3a1e8c6677e3b271593c0a371360ad 511 SMART SM00880 234 502 3.8E-19 T 12-10-2018 IPR007899 CHAD domain M634_04015 7f3a1e8c6677e3b271593c0a371360ad 511 Gene3D G3DSA:1.40.20.10 217 435 2.5E-10 T 12-10-2018 IPR038186 CHAD domain superfamily M634_16395 cb35355f25edbe1fe399145f3f420c36 110 Pfam PF06772 Bacterial low temperature requirement A protein (LtrA) 17 108 2.7E-7 T 12-10-2018 IPR010640 Low temperature requirement A M634_24375 a6438778674618e9a7339b51a3857214 90 Pfam PF07383 Protein of unknown function (DUF1496) 36 87 2.9E-23 T 12-10-2018 IPR009971 Protein of unknown function DUF1496 M634_14815 6178034769f60f39dd93a9cd17bc7777 579 Gene3D G3DSA:2.60.40.10 1 93 1.5E-24 T 12-10-2018 IPR013783 Immunoglobulin-like fold M634_14815 6178034769f60f39dd93a9cd17bc7777 579 SUPERFAMILY SSF81296 2 90 1.96E-14 T 12-10-2018 IPR014756 Immunoglobulin E-set M634_14815 6178034769f60f39dd93a9cd17bc7777 579 SUPERFAMILY SSF48208 84 565 9.45E-94 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 M634_14815 6178034769f60f39dd93a9cd17bc7777 579 Gene3D G3DSA:1.50.10.10 94 579 1.1E-240 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 M634_14815 6178034769f60f39dd93a9cd17bc7777 579 Pfam PF02927 Cellulase N-terminal ig-like domain 5 84 8.8E-10 T 12-10-2018 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 M634_14815 6178034769f60f39dd93a9cd17bc7777 579 Pfam PF00759 Glycosyl hydrolase family 9 98 500 2.1E-23 T 12-10-2018 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 M634_03750 0550c9ce3ee3a6e907d35f5f8a4dae99 222 SUPERFAMILY SSF46785 4 74 2.47E-13 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_03750 0550c9ce3ee3a6e907d35f5f8a4dae99 222 Gene3D G3DSA:1.10.10.10 2 71 9.2E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_03750 0550c9ce3ee3a6e907d35f5f8a4dae99 222 SMART SM00345 12 70 1.1E-7 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_03750 0550c9ce3ee3a6e907d35f5f8a4dae99 222 SUPERFAMILY SSF48008 77 215 4.71E-7 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal M634_03750 0550c9ce3ee3a6e907d35f5f8a4dae99 222 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 70 2.1E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_03750 0550c9ce3ee3a6e907d35f5f8a4dae99 222 Gene3D G3DSA:1.20.120.530 75 220 1.1E-7 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal M634_03750 0550c9ce3ee3a6e907d35f5f8a4dae99 222 Pfam PF07729 FCD domain 80 207 3.1E-7 T 12-10-2018 IPR011711 GntR, C-terminal M634_00460 aebb3db6967e296622035483a0402c8b 195 Gene3D G3DSA:3.40.50.880 1 193 5.1E-61 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M634_00460 aebb3db6967e296622035483a0402c8b 195 SUPERFAMILY SSF52317 1 191 1.65E-53 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M634_00460 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00097 Anthranilate synthase component II signature 47 56 3.7E-36 T 12-10-2018 M634_00460 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00097 Anthranilate synthase component II signature 74 85 3.7E-36 T 12-10-2018 M634_00460 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.7E-36 T 12-10-2018 M634_00460 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00097 Anthranilate synthase component II signature 99 107 3.7E-36 T 12-10-2018 M634_00460 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00097 Anthranilate synthase component II signature 2 16 3.7E-36 T 12-10-2018 M634_00460 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00097 Anthranilate synthase component II signature 119 131 3.7E-36 T 12-10-2018 M634_00460 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 5.4E-5 T 12-10-2018 M634_00460 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 5.4E-5 T 12-10-2018 M634_00460 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 4.4E-13 T 12-10-2018 M634_00460 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 4.4E-13 T 12-10-2018 M634_00460 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 4.4E-13 T 12-10-2018 M634_00460 aebb3db6967e296622035483a0402c8b 195 Pfam PF00117 Glutamine amidotransferase class-I 4 191 2.3E-54 T 12-10-2018 IPR017926 Glutamine amidotransferase M634_00460 aebb3db6967e296622035483a0402c8b 195 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 192 1.8E-85 T 12-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 M634_23320 1810c668622ffff5ecb6b8c852a40abc 384 SUPERFAMILY SSF47005 122 164 4.84E-8 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 M634_23320 1810c668622ffff5ecb6b8c852a40abc 384 SUPERFAMILY SSF52777 172 380 8.01E-57 T 12-10-2018 M634_23320 1810c668622ffff5ecb6b8c852a40abc 384 Pfam PF02817 e3 binding domain 129 161 5.5E-9 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 M634_23320 1810c668622ffff5ecb6b8c852a40abc 384 Gene3D G3DSA:3.30.559.10 176 382 1.0E-51 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 M634_23320 1810c668622ffff5ecb6b8c852a40abc 384 Gene3D G3DSA:2.40.50.100 1 90 4.8E-23 T 12-10-2018 M634_23320 1810c668622ffff5ecb6b8c852a40abc 384 Gene3D G3DSA:4.10.320.10 126 165 1.1E-9 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 M634_23320 1810c668622ffff5ecb6b8c852a40abc 384 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 174 380 3.5E-57 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 M634_23320 1810c668622ffff5ecb6b8c852a40abc 384 SUPERFAMILY SSF51230 2 86 1.03E-24 T 12-10-2018 IPR011053 Single hybrid motif M634_23320 1810c668622ffff5ecb6b8c852a40abc 384 Pfam PF00364 Biotin-requiring enzyme 3 75 3.4E-18 T 12-10-2018 IPR000089 Biotin/lipoyl attachment M634_23320 1810c668622ffff5ecb6b8c852a40abc 384 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 26 55 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 M634_22570 e84bd76a1ef47149c218a9f8434416fc 388 SMART SM00267 201 386 2.7E-36 T 12-10-2018 IPR000160 GGDEF domain M634_22570 e84bd76a1ef47149c218a9f8434416fc 388 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 210 318 3.3E-25 T 12-10-2018 IPR000160 GGDEF domain M634_22570 e84bd76a1ef47149c218a9f8434416fc 388 SUPERFAMILY SSF55073 217 385 7.3E-35 T 12-10-2018 IPR029787 Nucleotide cyclase M634_22570 e84bd76a1ef47149c218a9f8434416fc 388 Pfam PF00990 Diguanylate cyclase, GGDEF domain 212 317 3.1E-24 T 12-10-2018 IPR000160 GGDEF domain M634_22570 e84bd76a1ef47149c218a9f8434416fc 388 Pfam PF00990 Diguanylate cyclase, GGDEF domain 336 381 3.7E-6 T 12-10-2018 IPR000160 GGDEF domain M634_22570 e84bd76a1ef47149c218a9f8434416fc 388 Gene3D G3DSA:3.30.70.270 204 387 1.8E-46 T 12-10-2018 M634_02115 ace0fc2777934a593c07734f7bdfbb5b 277 SUPERFAMILY SSF51735 106 273 4.12E-43 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_02115 ace0fc2777934a593c07734f7bdfbb5b 277 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 120 195 5.7E-16 T 12-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase M634_02115 ace0fc2777934a593c07734f7bdfbb5b 277 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 5 273 32.539 T 12-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 M634_02115 ace0fc2777934a593c07734f7bdfbb5b 277 Gene3D G3DSA:3.40.50.720 119 239 6.8E-85 T 12-10-2018 M634_02115 ace0fc2777934a593c07734f7bdfbb5b 277 SUPERFAMILY SSF53223 6 105 1.32E-30 T 12-10-2018 M634_02115 ace0fc2777934a593c07734f7bdfbb5b 277 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 10 92 1.2E-21 T 12-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 M634_02115 ace0fc2777934a593c07734f7bdfbb5b 277 Gene3D G3DSA:3.40.50.10860 8 258 6.8E-85 T 12-10-2018 M634_02115 ace0fc2777934a593c07734f7bdfbb5b 277 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 8 274 2.6E-87 T 12-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 M634_17945 47385dbdc0de766ec5273542cae13839 412 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 145 153 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site M634_17945 47385dbdc0de766ec5273542cae13839 412 Pfam PF00270 DEAD/DEAH box helicase 24 185 3.8E-45 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 M634_17945 47385dbdc0de766ec5273542cae13839 412 Pfam PF00271 Helicase conserved C-terminal domain 223 331 5.6E-26 T 12-10-2018 IPR001650 Helicase, C-terminal M634_17945 47385dbdc0de766ec5273542cae13839 412 Gene3D G3DSA:3.40.50.300 205 365 2.2E-44 T 12-10-2018 M634_17945 47385dbdc0de766ec5273542cae13839 412 Gene3D G3DSA:3.40.50.300 1 202 2.8E-66 T 12-10-2018 M634_17945 47385dbdc0de766ec5273542cae13839 412 SMART SM00490 250 331 1.3E-29 T 12-10-2018 IPR001650 Helicase, C-terminal M634_17945 47385dbdc0de766ec5273542cae13839 412 SUPERFAMILY SSF52540 68 351 1.83E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_17945 47385dbdc0de766ec5273542cae13839 412 SMART SM00487 19 212 2.9E-48 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M634_17795 c98c2d5dd7ef57f7bdf20ddb262fba86 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 227 2.7E-18 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_17795 c98c2d5dd7ef57f7bdf20ddb262fba86 235 Gene3D G3DSA:1.10.10.10 122 232 1.7E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_17795 c98c2d5dd7ef57f7bdf20ddb262fba86 235 SMART SM00448 4 114 8.3E-48 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_17795 c98c2d5dd7ef57f7bdf20ddb262fba86 235 SMART SM00862 152 227 1.8E-17 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_17795 c98c2d5dd7ef57f7bdf20ddb262fba86 235 Gene3D G3DSA:3.40.50.2300 1 121 1.3E-41 T 12-10-2018 M634_17795 c98c2d5dd7ef57f7bdf20ddb262fba86 235 Pfam PF00072 Response regulator receiver domain 6 115 3.8E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_17795 c98c2d5dd7ef57f7bdf20ddb262fba86 235 SUPERFAMILY SSF52172 2 131 5.98E-45 T 12-10-2018 IPR011006 CheY-like superfamily M634_17795 c98c2d5dd7ef57f7bdf20ddb262fba86 235 SUPERFAMILY SSF46894 132 229 1.05E-19 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M634_04240 82a53a00fca9b6c945861a83fece0b01 269 SUPERFAMILY SSF55347 127 236 1.87E-37 T 12-10-2018 M634_04240 82a53a00fca9b6c945861a83fece0b01 269 Gene3D G3DSA:3.30.360.10 127 234 3.9E-101 T 12-10-2018 M634_04240 82a53a00fca9b6c945861a83fece0b01 269 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 265 35.512 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 M634_04240 82a53a00fca9b6c945861a83fece0b01 269 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 150 167 - T 12-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 M634_04240 82a53a00fca9b6c945861a83fece0b01 269 SUPERFAMILY SSF51735 1 268 1.98E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_04240 82a53a00fca9b6c945861a83fece0b01 269 Gene3D G3DSA:3.40.50.720 3 264 3.9E-101 T 12-10-2018 M634_04240 82a53a00fca9b6c945861a83fece0b01 269 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 265 4.8E-98 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 M634_04240 82a53a00fca9b6c945861a83fece0b01 269 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 128 264 6.9E-44 T 12-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 M634_04240 82a53a00fca9b6c945861a83fece0b01 269 PIRSF PIRSF000161 1 268 8.4E-89 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 M634_04240 82a53a00fca9b6c945861a83fece0b01 269 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 125 2.7E-40 T 12-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 M634_18730 605d78a11f6a6f830e61a8c0adfaa19b 266 Gene3D G3DSA:1.10.3720.10 63 260 4.1E-26 T 12-10-2018 IPR035906 MetI-like superfamily M634_18730 605d78a11f6a6f830e61a8c0adfaa19b 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 254 1.3E-31 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_18730 605d78a11f6a6f830e61a8c0adfaa19b 266 SUPERFAMILY SSF161098 68 250 8.76E-33 T 12-10-2018 IPR035906 MetI-like superfamily M634_15520 c4f97d536c7ce206ae83556dbc517a76 200 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 194 4.8E-65 T 12-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 M634_15520 c4f97d536c7ce206ae83556dbc517a76 200 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 196 50.894 T 12-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 M634_15520 c4f97d536c7ce206ae83556dbc517a76 200 Pfam PF01725 Ham1 family 4 191 6.3E-58 T 12-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 M634_15520 c4f97d536c7ce206ae83556dbc517a76 200 SUPERFAMILY SSF52972 1 194 1.13E-73 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like M634_15520 c4f97d536c7ce206ae83556dbc517a76 200 Gene3D G3DSA:3.90.950.10 1 198 2.0E-83 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like M634_17030 b7912bd065540d5ec5c874978615ba14 457 Gene3D G3DSA:3.30.565.10 325 457 3.5E-14 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_17030 b7912bd065540d5ec5c874978615ba14 457 SUPERFAMILY SSF47384 241 319 3.73E-10 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M634_17030 b7912bd065540d5ec5c874978615ba14 457 SUPERFAMILY SSF55874 311 455 1.64E-16 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_17030 b7912bd065540d5ec5c874978615ba14 457 Pfam PF00512 His Kinase A (phospho-acceptor) domain 261 319 1.9E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_17030 b7912bd065540d5ec5c874978615ba14 457 Gene3D G3DSA:1.10.287.130 194 316 7.8E-12 T 12-10-2018 M634_17030 b7912bd065540d5ec5c874978615ba14 457 SMART SM00388 257 320 3.5E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_13860 f1a10baf0c925a568a62ea4ca35368e0 170 Hamap MF_00042 Ribonuclease H [rnhA]. 18 165 36.438 T 12-10-2018 IPR022892 Ribonuclease HI GO:0004523 M634_13860 f1a10baf0c925a568a62ea4ca35368e0 170 SUPERFAMILY SSF53098 19 159 5.18E-58 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M634_13860 f1a10baf0c925a568a62ea4ca35368e0 170 Pfam PF00075 RNase H 19 157 9.7E-53 T 12-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 M634_13860 f1a10baf0c925a568a62ea4ca35368e0 170 Gene3D G3DSA:3.30.420.10 17 170 6.5E-60 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M634_08290 e93fd005aa8d4951d4ca53c82ea50a90 416 SUPERFAMILY SSF51338 1 411 2.57E-24 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 M634_08290 e93fd005aa8d4951d4ca53c82ea50a90 416 TIGRFAM TIGR01224 hutI: imidazolonepropionase 26 409 5.5E-149 T 12-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 M634_08290 e93fd005aa8d4951d4ca53c82ea50a90 416 Gene3D G3DSA:2.30.40.10 7 408 2.5E-158 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 M634_08290 e93fd005aa8d4951d4ca53c82ea50a90 416 Hamap MF_00372 Imidazolonepropionase [hutI]. 2 411 41.29 T 12-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 M634_08290 e93fd005aa8d4951d4ca53c82ea50a90 416 Pfam PF01979 Amidohydrolase family 70 408 1.5E-14 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 M634_08290 e93fd005aa8d4951d4ca53c82ea50a90 416 Gene3D G3DSA:3.20.20.140 73 371 2.5E-158 T 12-10-2018 M634_08290 e93fd005aa8d4951d4ca53c82ea50a90 416 SUPERFAMILY SSF51556 72 371 2.31E-82 T 12-10-2018 IPR032466 Metal-dependent hydrolase M634_05480 586cfbe13e54e64a18aaca8a45a05512 200 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 11 190 9.2E-36 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT M634_14735 8b831f9a2af327bbe3be08119cb9dfe3 395 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 M634_14735 8b831f9a2af327bbe3be08119cb9dfe3 395 Gene3D G3DSA:3.10.290.10 326 394 1.3E-14 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 M634_14735 8b831f9a2af327bbe3be08119cb9dfe3 395 Gene3D G3DSA:1.10.240.10 218 325 2.9E-35 T 12-10-2018 M634_14735 8b831f9a2af327bbe3be08119cb9dfe3 395 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 394 48.308 T 12-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 M634_14735 8b831f9a2af327bbe3be08119cb9dfe3 395 SUPERFAMILY SSF52374 6 316 1.08E-98 T 12-10-2018 M634_14735 8b831f9a2af327bbe3be08119cb9dfe3 395 Pfam PF00579 tRNA synthetases class I (W and Y) 30 316 1.3E-79 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 M634_14735 8b831f9a2af327bbe3be08119cb9dfe3 395 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 395 1.1E-126 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 M634_14735 8b831f9a2af327bbe3be08119cb9dfe3 395 Gene3D G3DSA:3.40.50.620 5 217 6.3E-73 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M634_14735 8b831f9a2af327bbe3be08119cb9dfe3 395 SUPERFAMILY SSF55174 297 394 8.98E-16 T 12-10-2018 M634_14735 8b831f9a2af327bbe3be08119cb9dfe3 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 1.3E-24 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 M634_14735 8b831f9a2af327bbe3be08119cb9dfe3 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 1.3E-24 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 M634_14735 8b831f9a2af327bbe3be08119cb9dfe3 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 1.3E-24 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 M634_14735 8b831f9a2af327bbe3be08119cb9dfe3 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 1.3E-24 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 M634_13605 991410c0da12b5697f6a38786f12faea 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 73 89 5.6E-28 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 M634_13605 991410c0da12b5697f6a38786f12faea 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 89 102 5.6E-28 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 M634_13605 991410c0da12b5697f6a38786f12faea 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 102 117 5.6E-28 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 M634_13605 991410c0da12b5697f6a38786f12faea 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 56 72 5.6E-28 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 M634_13605 991410c0da12b5697f6a38786f12faea 136 Gene3D G3DSA:2.30.330.10 44 136 4.2E-34 T 12-10-2018 IPR036429 SpoA-like superfamily M634_13605 991410c0da12b5697f6a38786f12faea 136 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 54 128 1.5E-33 T 12-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 M634_13605 991410c0da12b5697f6a38786f12faea 136 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 56 126 6.6E-25 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) M634_13605 991410c0da12b5697f6a38786f12faea 136 SUPERFAMILY SSF101801 54 134 7.32E-25 T 12-10-2018 IPR036429 SpoA-like superfamily M634_16850 01b0e9a95f8de6c0b431e3b67d10916f 494 Gene3D G3DSA:1.25.40.10 170 318 1.6E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_16850 01b0e9a95f8de6c0b431e3b67d10916f 494 Gene3D G3DSA:1.25.40.10 11 169 5.5E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_16850 01b0e9a95f8de6c0b431e3b67d10916f 494 SMART SM00028 207 240 3.1 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_16850 01b0e9a95f8de6c0b431e3b67d10916f 494 SMART SM00028 127 160 53.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_16850 01b0e9a95f8de6c0b431e3b67d10916f 494 SUPERFAMILY SSF48452 119 315 6.54E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_23115 d9d52961c646686b92b9852a3dd75d12 1172 Gene3D G3DSA:3.40.50.300 103 308 1.3E-5 T 12-10-2018 M634_23115 d9d52961c646686b92b9852a3dd75d12 1172 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 17 1170 0.0 T 12-10-2018 IPR017731 Type VI secretion system, IcmF M634_23115 d9d52961c646686b92b9852a3dd75d12 1172 Pfam PF14331 ImcF-related N-terminal domain 193 450 5.4E-87 T 12-10-2018 IPR025743 ImcF-related, N-terminal domain M634_23115 d9d52961c646686b92b9852a3dd75d12 1172 Pfam PF06744 Type VI secretion protein IcmF C-terminal 927 1120 8.0E-59 T 12-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal M634_23115 d9d52961c646686b92b9852a3dd75d12 1172 SUPERFAMILY SSF52540 106 292 6.27E-14 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_23115 d9d52961c646686b92b9852a3dd75d12 1172 Pfam PF06761 Intracellular multiplication and human macrophage-killing 504 803 1.8E-75 T 12-10-2018 IPR009612 ImcF-related M634_22000 9b027bdeb1f80647cc3d0907b9d0e623 241 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 2.1E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M634_22000 9b027bdeb1f80647cc3d0907b9d0e623 241 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 2.1E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M634_22000 9b027bdeb1f80647cc3d0907b9d0e623 241 Gene3D G3DSA:1.10.357.10 2 200 1.0E-24 T 12-10-2018 M634_22000 9b027bdeb1f80647cc3d0907b9d0e623 241 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 1.6E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M634_22000 9b027bdeb1f80647cc3d0907b9d0e623 241 SUPERFAMILY SSF46689 9 86 2.21E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_07200 55e7c1eaa96fc018a900f5e94e0f855a 248 SUPERFAMILY SSF50630 107 242 1.03E-41 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily M634_07200 55e7c1eaa96fc018a900f5e94e0f855a 248 Gene3D G3DSA:1.20.5.340 20 86 3.3E-5 T 12-10-2018 M634_07200 55e7c1eaa96fc018a900f5e94e0f855a 248 Pfam PF05618 Putative ATP-dependant zinc protease 107 244 2.2E-47 T 12-10-2018 M634_07200 55e7c1eaa96fc018a900f5e94e0f855a 248 Gene3D G3DSA:2.40.70.10 104 235 8.1E-42 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily M634_10015 0641a1fb7b3ff1314d74acd4805c49da 374 Pfam PF13692 Glycosyl transferases group 1 216 345 2.9E-7 T 12-10-2018 M634_10015 0641a1fb7b3ff1314d74acd4805c49da 374 SUPERFAMILY SSF53756 74 372 6.28E-21 T 12-10-2018 M634_10015 0641a1fb7b3ff1314d74acd4805c49da 374 Gene3D G3DSA:3.40.50.2000 203 351 8.0E-29 T 12-10-2018 M634_18140 76b1de171ca7139c820869365453139c 541 PIRSF PIRSF002741 1 541 4.2E-113 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 M634_18140 76b1de171ca7139c820869365453139c 541 Gene3D G3DSA:3.90.76.10 71 194 1.2E-182 T 12-10-2018 M634_18140 76b1de171ca7139c820869365453139c 541 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 82 462 6.6E-86 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain M634_18140 76b1de171ca7139c820869365453139c 541 SUPERFAMILY SSF53850 36 533 2.08E-141 T 12-10-2018 M634_18140 76b1de171ca7139c820869365453139c 541 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 87 108 - T 12-10-2018 IPR023765 Solute-binding protein family 5, conserved site M634_18140 76b1de171ca7139c820869365453139c 541 Gene3D G3DSA:3.40.190.10 41 523 1.2E-182 T 12-10-2018 M634_18140 76b1de171ca7139c820869365453139c 541 Gene3D G3DSA:3.10.105.10 296 511 1.2E-182 T 12-10-2018 M634_14335 f83371b48f900af274095d7bd982a28b 394 Pfam PF05940 NnrS protein 16 388 4.9E-108 T 12-10-2018 IPR010266 NnrS M634_00900 50c44eb20aa868a69911d712a17dc51c 650 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 3.2E-20 T 12-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 M634_00900 50c44eb20aa868a69911d712a17dc51c 650 Gene3D G3DSA:3.30.300.30 519 650 5.7E-31 T 12-10-2018 M634_00900 50c44eb20aa868a69911d712a17dc51c 650 SUPERFAMILY SSF56801 9 644 2.09E-182 T 12-10-2018 M634_00900 50c44eb20aa868a69911d712a17dc51c 650 Pfam PF00501 AMP-binding enzyme 83 523 1.7E-91 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 M634_00900 50c44eb20aa868a69911d712a17dc51c 650 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 12-10-2018 IPR020845 AMP-binding, conserved site M634_00900 50c44eb20aa868a69911d712a17dc51c 650 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 646 52.423 T 12-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 M634_00900 50c44eb20aa868a69911d712a17dc51c 650 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 644 0.0 T 12-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 M634_00900 50c44eb20aa868a69911d712a17dc51c 650 Pfam PF13193 AMP-binding enzyme C-terminal domain 532 610 2.8E-25 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain M634_00900 50c44eb20aa868a69911d712a17dc51c 650 Gene3D G3DSA:3.40.50.12780 50 516 1.8E-103 T 12-10-2018 M634_12510 4d2ab73fbdf39a7bd4912b3cdd4de2c5 1023 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 424 2.2E-171 T 12-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 M634_12510 4d2ab73fbdf39a7bd4912b3cdd4de2c5 1023 SUPERFAMILY SSF50249 40 124 3.97E-19 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_12510 4d2ab73fbdf39a7bd4912b3cdd4de2c5 1023 Hamap MF_00970 Ribonuclease E [rne]. 1 1010 35.903 T 12-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 M634_12510 4d2ab73fbdf39a7bd4912b3cdd4de2c5 1023 Gene3D G3DSA:2.40.50.140 32 125 3.9E-32 T 12-10-2018 M634_12510 4d2ab73fbdf39a7bd4912b3cdd4de2c5 1023 Gene3D G3DSA:3.40.1260.20 400 508 1.7E-38 T 12-10-2018 M634_12510 4d2ab73fbdf39a7bd4912b3cdd4de2c5 1023 SMART SM00316 37 119 1.1E-10 T 12-10-2018 IPR022967 RNA-binding domain, S1 M634_12510 4d2ab73fbdf39a7bd4912b3cdd4de2c5 1023 Pfam PF00575 S1 RNA binding domain 37 118 5.1E-14 T 12-10-2018 IPR003029 S1 domain GO:0003676 M634_12510 4d2ab73fbdf39a7bd4912b3cdd4de2c5 1023 Pfam PF10150 Ribonuclease E/G family 121 390 1.1E-94 T 12-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 M634_15275 3dcbaf5bf07851aa97cfb74f891db788 243 Hamap MF_00201 DNA repair protein RecO [recO]. 6 235 22.918 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 M634_15275 3dcbaf5bf07851aa97cfb74f891db788 243 Gene3D G3DSA:1.20.1440.120 84 242 6.4E-53 T 12-10-2018 M634_15275 3dcbaf5bf07851aa97cfb74f891db788 243 Pfam PF11967 Recombination protein O N terminal 11 81 2.5E-24 T 12-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal M634_15275 3dcbaf5bf07851aa97cfb74f891db788 243 TIGRFAM TIGR00613 reco: DNA repair protein RecO 11 234 4.8E-41 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 M634_15275 3dcbaf5bf07851aa97cfb74f891db788 243 SUPERFAMILY SSF57863 91 169 6.28E-12 T 12-10-2018 IPR037278 ARFGAP/RecO-like zinc finger M634_15275 3dcbaf5bf07851aa97cfb74f891db788 243 SUPERFAMILY SSF50249 10 80 5.82E-16 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_15275 3dcbaf5bf07851aa97cfb74f891db788 243 Gene3D G3DSA:2.40.50.140 6 83 4.1E-34 T 12-10-2018 M634_15275 3dcbaf5bf07851aa97cfb74f891db788 243 Pfam PF02565 Recombination protein O C terminal 90 230 6.7E-24 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 M634_00355 09290c74d3703f63aa63067dc17e8568 118 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 3 118 6.1E-46 T 12-10-2018 IPR017462 Sulphur relay, TusC/DsrF M634_00355 09290c74d3703f63aa63067dc17e8568 118 Pfam PF02635 DsrE/DsrF-like family 4 118 2.4E-25 T 12-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein M634_00355 09290c74d3703f63aa63067dc17e8568 118 SUPERFAMILY SSF75169 3 118 6.28E-36 T 12-10-2018 IPR027396 DsrEFH-like M634_00355 09290c74d3703f63aa63067dc17e8568 118 Gene3D G3DSA:3.40.1260.10 1 118 4.3E-38 T 12-10-2018 IPR027396 DsrEFH-like M634_18725 909be655557782aadd4e5a97b7c77497 316 SUPERFAMILY SSF53850 29 311 1.8E-48 T 12-10-2018 M634_18725 909be655557782aadd4e5a97b7c77497 316 Gene3D G3DSA:3.40.190.10 109 209 1.8E-71 T 12-10-2018 M634_18725 909be655557782aadd4e5a97b7c77497 316 Pfam PF09084 NMT1/THI5 like 37 248 2.3E-69 T 12-10-2018 IPR015168 SsuA/THI5-like M634_18725 909be655557782aadd4e5a97b7c77497 316 Gene3D G3DSA:3.40.190.10 28 303 1.8E-71 T 12-10-2018 M634_15020 f3a81cf03809b3148dbb33accf2d72a0 64 Gene3D G3DSA:3.30.50.10 1 64 2.3E-24 T 12-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 M634_15020 f3a81cf03809b3148dbb33accf2d72a0 64 SUPERFAMILY SSF57716 2 62 7.13E-21 T 12-10-2018 M634_15020 f3a81cf03809b3148dbb33accf2d72a0 64 Pfam PF03884 DNA gyrase inhibitor YacG 7 57 3.7E-24 T 12-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 M634_15020 f3a81cf03809b3148dbb33accf2d72a0 64 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 3 59 18.451 T 12-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 M634_17660 01995708d6a70d691a03ddf8d258e9dd 536 SUPERFAMILY SSF51445 55 457 6.0E-67 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M634_17660 01995708d6a70d691a03ddf8d258e9dd 536 Gene3D G3DSA:3.20.20.80 51 181 6.3E-38 T 12-10-2018 M634_17660 01995708d6a70d691a03ddf8d258e9dd 536 SMART SM00642 61 447 9.5E-34 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 M634_17660 01995708d6a70d691a03ddf8d258e9dd 536 Gene3D G3DSA:3.20.20.80 192 422 9.4E-31 T 12-10-2018 M634_17660 01995708d6a70d691a03ddf8d258e9dd 536 Pfam PF00128 Alpha amylase, catalytic domain 87 173 2.6E-26 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 M634_17660 01995708d6a70d691a03ddf8d258e9dd 536 Pfam PF00128 Alpha amylase, catalytic domain 205 390 1.1E-14 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 M634_17660 01995708d6a70d691a03ddf8d258e9dd 536 SUPERFAMILY SSF51011 456 533 2.55E-8 T 12-10-2018 M634_17660 01995708d6a70d691a03ddf8d258e9dd 536 Gene3D G3DSA:2.60.40.1180 450 533 9.3E-6 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta M634_18615 8e29d6284c5c47b523569650cefac313 178 SUPERFAMILY SSF48452 2 174 2.5E-65 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_18615 8e29d6284c5c47b523569650cefac313 178 Gene3D G3DSA:1.25.40.10 78 178 4.7E-33 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_18615 8e29d6284c5c47b523569650cefac313 178 Gene3D G3DSA:1.20.58.320 1 77 1.1E-24 T 12-10-2018 M634_18615 8e29d6284c5c47b523569650cefac313 178 Pfam PF06041 Bacterial protein of unknown function (DUF924) 5 175 1.7E-61 T 12-10-2018 IPR010323 Protein of unknown function DUF924 M634_11830 7a5472b281df0274f2b122d49fd60f95 177 Pfam PF08534 Redoxin 44 155 1.7E-12 T 12-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 M634_11830 7a5472b281df0274f2b122d49fd60f95 177 Gene3D G3DSA:3.40.30.10 24 174 9.5E-30 T 12-10-2018 M634_11830 7a5472b281df0274f2b122d49fd60f95 177 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 12 169 2.7E-40 T 12-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 M634_11830 7a5472b281df0274f2b122d49fd60f95 177 SUPERFAMILY SSF52833 44 174 3.09E-31 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M634_20560 724d9f370ccc514755063b6e8dc3713a 829 Hamap MF_01630 Periplasmic nitrate reductase [napA]. 1 828 32.487 T 12-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 M634_20560 724d9f370ccc514755063b6e8dc3713a 829 Pfam PF01568 Molydopterin dinucleotide binding domain 714 822 2.4E-27 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 M634_20560 724d9f370ccc514755063b6e8dc3713a 829 Gene3D G3DSA:3.30.200.210 41 666 0.0 T 12-10-2018 M634_20560 724d9f370ccc514755063b6e8dc3713a 829 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 46 63 - T 12-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 M634_20560 724d9f370ccc514755063b6e8dc3713a 829 Gene3D G3DSA:3.40.50.740 98 623 0.0 T 12-10-2018 M634_20560 724d9f370ccc514755063b6e8dc3713a 829 SUPERFAMILY SSF50692 689 828 3.32E-42 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily M634_20560 724d9f370ccc514755063b6e8dc3713a 829 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 2 828 0.0 T 12-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 M634_20560 724d9f370ccc514755063b6e8dc3713a 829 Gene3D G3DSA:2.40.40.20 705 828 2.2E-45 T 12-10-2018 M634_20560 724d9f370ccc514755063b6e8dc3713a 829 Pfam PF00384 Molybdopterin oxidoreductase 98 570 2.1E-87 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M634_20560 724d9f370ccc514755063b6e8dc3713a 829 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 42 94 1.9E-16 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M634_20560 724d9f370ccc514755063b6e8dc3713a 829 Gene3D G3DSA:3.40.228.10 177 702 0.0 T 12-10-2018 M634_20560 724d9f370ccc514755063b6e8dc3713a 829 SUPERFAMILY SSF53706 38 659 5.89E-199 T 12-10-2018 M634_20560 724d9f370ccc514755063b6e8dc3713a 829 SMART SM00926 41 95 1.9E-13 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M634_08310 f3c6472a9ff37548f797e4a7624f6fa1 642 SMART SM00863 171 220 5.1E-19 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 M634_08310 f3c6472a9ff37548f797e4a7624f6fa1 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 67 635 34.097 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 M634_08310 f3c6472a9ff37548f797e4a7624f6fa1 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 220 7.7E-14 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 M634_08310 f3c6472a9ff37548f797e4a7624f6fa1 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 73 632 3.0E-241 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 M634_08310 f3c6472a9ff37548f797e4a7624f6fa1 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 319 530 3.7E-49 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 M634_08310 f3c6472a9ff37548f797e4a7624f6fa1 642 Gene3D G3DSA:3.30.930.10 224 532 7.0E-129 T 12-10-2018 M634_08310 f3c6472a9ff37548f797e4a7624f6fa1 642 Gene3D G3DSA:3.30.54.20 131 188 3.7E-64 T 12-10-2018 M634_08310 f3c6472a9ff37548f797e4a7624f6fa1 642 SUPERFAMILY SSF55681 244 527 6.77E-99 T 12-10-2018 M634_08310 f3c6472a9ff37548f797e4a7624f6fa1 642 Gene3D G3DSA:3.10.20.30 3 62 1.1E-22 T 12-10-2018 IPR012675 Beta-grasp domain superfamily M634_08310 f3c6472a9ff37548f797e4a7624f6fa1 642 Gene3D G3DSA:3.40.50.800 533 642 8.3E-31 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily M634_08310 f3c6472a9ff37548f797e4a7624f6fa1 642 Pfam PF02824 TGS domain 4 61 9.8E-12 T 12-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 M634_08310 f3c6472a9ff37548f797e4a7624f6fa1 642 SUPERFAMILY SSF81271 3 61 2.29E-15 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 M634_08310 f3c6472a9ff37548f797e4a7624f6fa1 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 1.1E-53 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 M634_08310 f3c6472a9ff37548f797e4a7624f6fa1 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 465 493 1.1E-53 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 M634_08310 f3c6472a9ff37548f797e4a7624f6fa1 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 535 547 1.1E-53 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 M634_08310 f3c6472a9ff37548f797e4a7624f6fa1 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 1.1E-53 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 M634_08310 f3c6472a9ff37548f797e4a7624f6fa1 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 508 521 1.1E-53 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 M634_08310 f3c6472a9ff37548f797e4a7624f6fa1 642 Gene3D G3DSA:3.30.980.10 70 223 3.7E-64 T 12-10-2018 M634_08310 f3c6472a9ff37548f797e4a7624f6fa1 642 SUPERFAMILY SSF55186 64 242 2.22E-65 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 M634_08310 f3c6472a9ff37548f797e4a7624f6fa1 642 Pfam PF03129 Anticodon binding domain 542 631 1.9E-21 T 12-10-2018 IPR004154 Anticodon-binding M634_08310 f3c6472a9ff37548f797e4a7624f6fa1 642 SUPERFAMILY SSF52954 530 638 1.24E-31 T 12-10-2018 M634_18070 fe6f7846aabc720caa0036f76d8e23e7 1048 SUPERFAMILY SSF81935 17 188 7.06E-64 T 12-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 M634_18070 fe6f7846aabc720caa0036f76d8e23e7 1048 SUPERFAMILY SSF53720 559 1035 1.57E-125 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 M634_18070 fe6f7846aabc720caa0036f76d8e23e7 1048 Gene3D G3DSA:3.40.605.10 549 1034 2.3E-147 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 M634_18070 fe6f7846aabc720caa0036f76d8e23e7 1048 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 73 187 1.2E-45 T 12-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 M634_18070 fe6f7846aabc720caa0036f76d8e23e7 1048 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 838 849 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 M634_18070 fe6f7846aabc720caa0036f76d8e23e7 1048 Pfam PF00171 Aldehyde dehydrogenase family 585 1034 3.1E-117 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 M634_18070 fe6f7846aabc720caa0036f76d8e23e7 1048 PIRSF PIRSF000197 3 1047 0.0 T 12-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 M634_18070 fe6f7846aabc720caa0036f76d8e23e7 1048 Gene3D G3DSA:3.40.309.10 813 1005 2.3E-147 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 M634_18070 fe6f7846aabc720caa0036f76d8e23e7 1048 SUPERFAMILY SSF51730 190 532 5.89E-116 T 12-10-2018 IPR029041 FAD-linked oxidoreductase-like M634_18070 fe6f7846aabc720caa0036f76d8e23e7 1048 Pfam PF01619 Proline dehydrogenase 197 490 2.8E-94 T 12-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 M634_18070 fe6f7846aabc720caa0036f76d8e23e7 1048 Gene3D G3DSA:3.20.20.220 150 525 5.5E-132 T 12-10-2018 M634_18070 fe6f7846aabc720caa0036f76d8e23e7 1048 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 526 1034 3.7E-244 T 12-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 M634_04095 b4367cbfde6eb74c78cfd6a73a0327d8 142 Pfam PF00572 Ribosomal protein L13 15 138 2.5E-57 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 M634_04095 b4367cbfde6eb74c78cfd6a73a0327d8 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 8.9E-66 T 12-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_04095 b4367cbfde6eb74c78cfd6a73a0327d8 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 12-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 M634_04095 b4367cbfde6eb74c78cfd6a73a0327d8 142 Gene3D G3DSA:3.90.1180.10 1 142 1.4E-64 T 12-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 M634_04095 b4367cbfde6eb74c78cfd6a73a0327d8 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.809 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 M634_04095 b4367cbfde6eb74c78cfd6a73a0327d8 142 PIRSF PIRSF002181 1 142 4.3E-53 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 M634_04095 b4367cbfde6eb74c78cfd6a73a0327d8 142 SUPERFAMILY SSF52161 1 140 1.24E-60 T 12-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 M634_23760 8b2659e82cd8bde34dec838c5fbd6a24 248 Pfam PF17131 Outer membrane lipoprotein-sorting protein 64 244 5.5E-53 T 12-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein M634_23760 8b2659e82cd8bde34dec838c5fbd6a24 248 Gene3D G3DSA:2.50.20.10 15 244 1.1E-58 T 12-10-2018 M634_16585 cd016d9ea0d6a016e066443becf49a70 258 Gene3D G3DSA:3.40.930.10 105 251 8.5E-17 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 M634_16585 cd016d9ea0d6a016e066443becf49a70 258 SUPERFAMILY SSF55594 9 88 4.32E-12 T 12-10-2018 IPR035895 HPr-like superfamily M634_16585 cd016d9ea0d6a016e066443becf49a70 258 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 128 251 1.7E-21 T 12-10-2018 IPR002178 PTS EIIA type-2 domain M634_16585 cd016d9ea0d6a016e066443becf49a70 258 PIRSF PIRSF029195 1 258 2.0E-172 T 12-10-2018 IPR016910 Uncharacterised conserved protein UCP029195, PTS-EIIA 2 M634_16585 cd016d9ea0d6a016e066443becf49a70 258 Gene3D G3DSA:3.30.1340.10 4 89 1.6E-6 T 12-10-2018 IPR035895 HPr-like superfamily M634_16585 cd016d9ea0d6a016e066443becf49a70 258 SUPERFAMILY SSF55804 128 249 4.84E-18 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 M634_07965 5267d1a01468442e05cbd5839b4699f1 219 SMART SM00448 1 112 1.7E-34 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_07965 5267d1a01468442e05cbd5839b4699f1 219 SUPERFAMILY SSF52172 1 133 2.85E-36 T 12-10-2018 IPR011006 CheY-like superfamily M634_07965 5267d1a01468442e05cbd5839b4699f1 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 4.2E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_07965 5267d1a01468442e05cbd5839b4699f1 219 Gene3D G3DSA:3.40.50.2300 1 122 2.1E-36 T 12-10-2018 M634_07965 5267d1a01468442e05cbd5839b4699f1 219 SMART SM00862 145 216 4.2E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_07965 5267d1a01468442e05cbd5839b4699f1 219 Gene3D G3DSA:1.10.10.10 123 219 1.3E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_07965 5267d1a01468442e05cbd5839b4699f1 219 Pfam PF00072 Response regulator receiver domain 3 112 6.5E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_07965 5267d1a01468442e05cbd5839b4699f1 219 SUPERFAMILY SSF46894 119 217 7.65E-27 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M634_07080 dcb4525c3e58b45274dc0b85d99859d5 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.7E-27 T 12-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 M634_07080 dcb4525c3e58b45274dc0b85d99859d5 72 SMART SM00316 4 72 4.8E-6 T 12-10-2018 IPR022967 RNA-binding domain, S1 M634_07080 dcb4525c3e58b45274dc0b85d99859d5 72 SUPERFAMILY SSF50249 1 70 9.43E-29 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_07080 dcb4525c3e58b45274dc0b85d99859d5 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 1.5E-38 T 12-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 M634_07080 dcb4525c3e58b45274dc0b85d99859d5 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.238 T 12-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 M634_07080 dcb4525c3e58b45274dc0b85d99859d5 72 Gene3D G3DSA:2.40.50.140 1 72 8.4E-37 T 12-10-2018 M634_02665 58a184616019d972845a8c1fd351a38c 674 PRINTS PR00811 Bacterial general secretion pathway protein D signature 481 491 2.8E-37 T 12-10-2018 IPR001775 GspD/PilQ family M634_02665 58a184616019d972845a8c1fd351a38c 674 PRINTS PR00811 Bacterial general secretion pathway protein D signature 576 594 2.8E-37 T 12-10-2018 IPR001775 GspD/PilQ family M634_02665 58a184616019d972845a8c1fd351a38c 674 PRINTS PR00811 Bacterial general secretion pathway protein D signature 446 470 2.8E-37 T 12-10-2018 IPR001775 GspD/PilQ family M634_02665 58a184616019d972845a8c1fd351a38c 674 PRINTS PR00811 Bacterial general secretion pathway protein D signature 344 354 2.8E-37 T 12-10-2018 IPR001775 GspD/PilQ family M634_02665 58a184616019d972845a8c1fd351a38c 674 PRINTS PR00811 Bacterial general secretion pathway protein D signature 599 613 2.8E-37 T 12-10-2018 IPR001775 GspD/PilQ family M634_02665 58a184616019d972845a8c1fd351a38c 674 Pfam PF00263 Bacterial type II and III secretion system protein 450 612 6.2E-51 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 M634_02665 58a184616019d972845a8c1fd351a38c 674 Gene3D G3DSA:3.30.1370.120 21 185 1.7E-52 T 12-10-2018 IPR038591 NolW-like superfamily M634_02665 58a184616019d972845a8c1fd351a38c 674 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 557 590 - T 12-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 M634_02665 58a184616019d972845a8c1fd351a38c 674 Gene3D G3DSA:3.30.1370.120 263 342 1.8E-17 T 12-10-2018 IPR038591 NolW-like superfamily M634_02665 58a184616019d972845a8c1fd351a38c 674 Pfam PF03958 Bacterial type II/III secretion system short domain 266 344 1.9E-18 T 12-10-2018 IPR005644 NolW-like M634_02665 58a184616019d972845a8c1fd351a38c 674 Pfam PF03958 Bacterial type II/III secretion system short domain 191 258 7.4E-16 T 12-10-2018 IPR005644 NolW-like M634_02665 58a184616019d972845a8c1fd351a38c 674 Pfam PF03958 Bacterial type II/III secretion system short domain 125 186 7.5E-9 T 12-10-2018 IPR005644 NolW-like M634_02665 58a184616019d972845a8c1fd351a38c 674 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 30 621 2.0E-159 T 12-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 M634_02665 58a184616019d972845a8c1fd351a38c 674 Gene3D G3DSA:3.30.1370.120 188 258 1.6E-20 T 12-10-2018 IPR038591 NolW-like superfamily M634_02665 58a184616019d972845a8c1fd351a38c 674 PRINTS PR01032 Gene IV protein signature 592 614 8.1E-13 T 12-10-2018 M634_02665 58a184616019d972845a8c1fd351a38c 674 PRINTS PR01032 Gene IV protein signature 471 494 8.1E-13 T 12-10-2018 M634_02665 58a184616019d972845a8c1fd351a38c 674 PRINTS PR01032 Gene IV protein signature 539 567 8.1E-13 T 12-10-2018 M634_12255 e025b270708790c6d9be786af6772ebb 255 SUPERFAMILY SSF54862 47 231 1.15E-65 T 12-10-2018 M634_12255 e025b270708790c6d9be786af6772ebb 255 Pfam PF13247 4Fe-4S dicluster domain 102 196 1.1E-29 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M634_12255 e025b270708790c6d9be786af6772ebb 255 Gene3D G3DSA:3.30.70.20 40 247 2.6E-66 T 12-10-2018 M634_12255 e025b270708790c6d9be786af6772ebb 255 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 141 152 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M634_16430 2b3fff1bf4b8147a1079810d64ffdbbf 457 Pfam PF00271 Helicase conserved C-terminal domain 260 352 1.3E-6 T 12-10-2018 IPR001650 Helicase, C-terminal M634_16430 2b3fff1bf4b8147a1079810d64ffdbbf 457 Pfam PF04851 Type III restriction enzyme, res subunit 2 154 2.8E-11 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 M634_16430 2b3fff1bf4b8147a1079810d64ffdbbf 457 Gene3D G3DSA:3.40.50.300 180 385 6.3E-23 T 12-10-2018 M634_16430 2b3fff1bf4b8147a1079810d64ffdbbf 457 SUPERFAMILY SSF52540 18 356 4.49E-21 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_16430 2b3fff1bf4b8147a1079810d64ffdbbf 457 SMART SM00487 2 175 0.0025 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M634_16430 2b3fff1bf4b8147a1079810d64ffdbbf 457 Gene3D G3DSA:3.40.50.300 1 171 2.5E-15 T 12-10-2018 M634_13970 2dafe22dc75f80d76941867531d18725 185 Gene3D G3DSA:1.10.132.20 101 185 5.8E-29 T 12-10-2018 M634_13970 2dafe22dc75f80d76941867531d18725 185 Gene3D G3DSA:1.10.132.20 1 34 1.1E-10 T 12-10-2018 M634_13970 2dafe22dc75f80d76941867531d18725 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 2.1E-77 T 12-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 M634_13970 2dafe22dc75f80d76941867531d18725 185 SUPERFAMILY SSF55194 2 184 1.01E-71 T 12-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 M634_13970 2dafe22dc75f80d76941867531d18725 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.833 T 12-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 M634_13970 2dafe22dc75f80d76941867531d18725 185 Pfam PF01765 Ribosome recycling factor 20 183 9.6E-63 T 12-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 M634_13970 2dafe22dc75f80d76941867531d18725 185 Gene3D G3DSA:3.30.1360.40 35 100 7.8E-31 T 12-10-2018 M634_21850 d37ce0f5323a81526d1504331e8a6198 481 SUPERFAMILY SSF48208 26 446 2.89E-53 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 M634_21850 d37ce0f5323a81526d1504331e8a6198 481 Gene3D G3DSA:1.50.10.10 29 427 1.9E-19 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 M634_21850 d37ce0f5323a81526d1504331e8a6198 481 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 86 291 6.7E-6 T 12-10-2018 M634_10965 74583211ce487795d5f18ba18424dd62 151 Pfam PF13527 Acetyltransferase (GNAT) domain 19 123 6.8E-9 T 12-10-2018 M634_10965 74583211ce487795d5f18ba18424dd62 151 Gene3D G3DSA:3.40.630.30 1 142 9.0E-20 T 12-10-2018 M634_10965 74583211ce487795d5f18ba18424dd62 151 SUPERFAMILY SSF55729 10 134 3.84E-16 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_01425 f947449f42fff985f4d25acb7d0f408b 310 SUPERFAMILY SSF56349 116 302 1.59E-52 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 M634_01425 f947449f42fff985f4d25acb7d0f408b 310 Gene3D G3DSA:1.10.150.130 14 108 2.4E-17 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal M634_01425 f947449f42fff985f4d25acb7d0f408b 310 SUPERFAMILY SSF47823 16 107 4.51E-12 T 12-10-2018 M634_01425 f947449f42fff985f4d25acb7d0f408b 310 Gene3D G3DSA:1.10.443.10 121 298 1.2E-56 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 M634_01425 f947449f42fff985f4d25acb7d0f408b 310 Pfam PF00589 Phage integrase family 122 290 1.4E-48 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 M634_01425 f947449f42fff985f4d25acb7d0f408b 310 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 18 306 1.0E-108 T 12-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 M634_01425 f947449f42fff985f4d25acb7d0f408b 310 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 15 304 54.942 T 12-10-2018 IPR023009 Tyrosine recombinase XerC/XerD M634_01425 f947449f42fff985f4d25acb7d0f408b 310 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 17 100 5.2E-20 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 M634_04195 718e0aeaa5a20d672da190c70ab3c235 355 Gene3D G3DSA:3.40.50.2000 161 318 4.6E-121 T 12-10-2018 M634_04195 718e0aeaa5a20d672da190c70ab3c235 355 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 7 352 34.859 T 12-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M634_04195 718e0aeaa5a20d672da190c70ab3c235 355 Gene3D G3DSA:3.40.50.2000 8 160 4.6E-121 T 12-10-2018 M634_04195 718e0aeaa5a20d672da190c70ab3c235 355 SUPERFAMILY SSF53756 5 352 4.52E-127 T 12-10-2018 M634_04195 718e0aeaa5a20d672da190c70ab3c235 355 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 184 337 2.6E-34 T 12-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 M634_04195 718e0aeaa5a20d672da190c70ab3c235 355 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 8 144 2.1E-47 T 12-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M634_04195 718e0aeaa5a20d672da190c70ab3c235 355 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 348 3.0E-118 T 12-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M634_19760 c545dc500f874e1aca38436e3e3b4e77 96 Hamap MF_00674 UPF0251 protein . 2 95 24.272 T 12-10-2018 IPR002852 Uncharacterised protein family UPF0251 M634_19760 c545dc500f874e1aca38436e3e3b4e77 96 Pfam PF02001 Protein of unknown function DUF134 2 89 7.2E-21 T 12-10-2018 IPR002852 Uncharacterised protein family UPF0251 M634_19760 c545dc500f874e1aca38436e3e3b4e77 96 Gene3D G3DSA:1.10.10.10 29 83 1.3E-7 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_19760 c545dc500f874e1aca38436e3e3b4e77 96 SUPERFAMILY SSF88659 36 79 4.8E-6 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like M634_13535 a546850871970878d725d96a1cc52695 259 Pfam PF13614 AAA domain 4 174 2.4E-50 T 12-10-2018 IPR025669 AAA domain M634_13535 a546850871970878d725d96a1cc52695 259 SUPERFAMILY SSF52540 1 252 5.77E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_13535 a546850871970878d725d96a1cc52695 259 Gene3D G3DSA:3.40.50.300 1 254 7.0E-65 T 12-10-2018 M634_17360 237ed52b0c7e203e40991b6d41f7a50f 150 Gene3D G3DSA:3.10.129.10 2 138 4.0E-38 T 12-10-2018 M634_17360 237ed52b0c7e203e40991b6d41f7a50f 150 SUPERFAMILY SSF54637 7 135 8.41E-33 T 12-10-2018 IPR029069 HotDog domain superfamily M634_17360 237ed52b0c7e203e40991b6d41f7a50f 150 Pfam PF13279 Thioesterase-like superfamily 16 134 4.3E-20 T 12-10-2018 M634_10155 76ad1d387d0ce6bb4c0a024b174bfe36 447 Pfam PF03616 Sodium/glutamate symporter 8 350 8.5E-13 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 M634_23195 c31064c052cec924820b19e8a1792c4b 317 Gene3D G3DSA:1.20.970.10 3 71 2.9E-15 T 12-10-2018 M634_23195 c31064c052cec924820b19e8a1792c4b 317 Pfam PF00591 Glycosyl transferase family, a/b domain 97 252 3.4E-5 T 12-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 M634_23195 c31064c052cec924820b19e8a1792c4b 317 SUPERFAMILY SSF47648 8 72 1.28E-14 T 12-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 M634_23195 c31064c052cec924820b19e8a1792c4b 317 SUPERFAMILY SSF52418 73 315 1.29E-43 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 M634_23195 c31064c052cec924820b19e8a1792c4b 317 Pfam PF02885 Glycosyl transferase family, helical bundle domain 11 68 2.1E-10 T 12-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 M634_23195 c31064c052cec924820b19e8a1792c4b 317 Gene3D G3DSA:3.40.1030.10 72 313 1.0E-41 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 M634_20670 8a99424efed85b660dacddd460fc7c79 333 Gene3D G3DSA:1.10.10.60 9 59 2.9E-18 T 12-10-2018 M634_20670 8a99424efed85b660dacddd460fc7c79 333 Pfam PF04198 Putative sugar-binding domain 66 320 4.5E-78 T 12-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 M634_20670 8a99424efed85b660dacddd460fc7c79 333 Gene3D G3DSA:3.40.50.1360 60 325 1.5E-80 T 12-10-2018 M634_20670 8a99424efed85b660dacddd460fc7c79 333 SUPERFAMILY SSF100950 70 320 3.18E-64 T 12-10-2018 IPR037171 NagB/RpiA transferase-like M634_09265 97fa0917cda9aa27ee01b0fcce0e7a5f 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 262 2.8E-66 T 12-10-2018 M634_09265 97fa0917cda9aa27ee01b0fcce0e7a5f 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 262 1.2E-60 T 12-10-2018 IPR000150 Cof family GO:0016787 M634_09265 97fa0917cda9aa27ee01b0fcce0e7a5f 269 Gene3D G3DSA:3.30.1240.10 86 191 9.5E-81 T 12-10-2018 M634_09265 97fa0917cda9aa27ee01b0fcce0e7a5f 269 SUPERFAMILY SSF56784 1 267 1.17E-74 T 12-10-2018 IPR036412 HAD-like superfamily M634_09265 97fa0917cda9aa27ee01b0fcce0e7a5f 269 Gene3D G3DSA:3.40.50.1000 3 263 9.5E-81 T 12-10-2018 IPR023214 HAD superfamily M634_09265 97fa0917cda9aa27ee01b0fcce0e7a5f 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 235 6.4E-26 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 M634_09265 97fa0917cda9aa27ee01b0fcce0e7a5f 269 ProSitePatterns PS01229 Hypothetical cof family signature 2. 216 238 - T 12-10-2018 M634_09265 97fa0917cda9aa27ee01b0fcce0e7a5f 269 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 12-10-2018 M634_02855 887d509487a9266f6585abbf5b0ab4eb 341 Gene3D G3DSA:1.10.3720.10 102 332 5.4E-19 T 12-10-2018 IPR035906 MetI-like superfamily M634_02855 887d509487a9266f6585abbf5b0ab4eb 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 132 338 2.3E-34 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_02855 887d509487a9266f6585abbf5b0ab4eb 341 SUPERFAMILY SSF161098 107 321 3.01E-16 T 12-10-2018 IPR035906 MetI-like superfamily M634_20210 43ad87b27a2fad860f4f0279035b49c9 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 7.9E-29 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 M634_20210 43ad87b27a2fad860f4f0279035b49c9 70 SMART SM00357 6 70 2.7E-29 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 M634_20210 43ad87b27a2fad860f4f0279035b49c9 70 PRINTS PR00050 Cold shock protein signature 28 37 3.0E-17 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 M634_20210 43ad87b27a2fad860f4f0279035b49c9 70 PRINTS PR00050 Cold shock protein signature 43 61 3.0E-17 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 M634_20210 43ad87b27a2fad860f4f0279035b49c9 70 PRINTS PR00050 Cold shock protein signature 7 22 3.0E-17 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 M634_20210 43ad87b27a2fad860f4f0279035b49c9 70 SUPERFAMILY SSF50249 3 69 4.29E-25 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_20210 43ad87b27a2fad860f4f0279035b49c9 70 Gene3D G3DSA:2.40.50.140 2 69 4.6E-29 T 12-10-2018 M634_20210 43ad87b27a2fad860f4f0279035b49c9 70 PIRSF PIRSF002599 1 70 8.4E-25 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 M634_18375 bf3d75afd3312714cdbcb512ca6201ca 147 Pfam PF07681 DoxX 17 103 1.1E-23 T 12-10-2018 IPR032808 DoxX family M634_14630 06b629edde305c2744591c7f44572adb 306 SUPERFAMILY SSF48452 34 286 4.67E-69 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_14630 06b629edde305c2744591c7f44572adb 306 Gene3D G3DSA:1.25.40.10 28 296 1.1E-81 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_14630 06b629edde305c2744591c7f44572adb 306 PIRSF PIRSF004654 1 296 3.5E-91 T 12-10-2018 IPR023605 Lipoprotein NlpI M634_14630 06b629edde305c2744591c7f44572adb 306 SMART SM00028 100 133 0.0059 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_14630 06b629edde305c2744591c7f44572adb 306 SMART SM00028 134 167 110.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_14630 06b629edde305c2744591c7f44572adb 306 SMART SM00028 238 271 45.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_14630 06b629edde305c2744591c7f44572adb 306 SMART SM00028 66 99 0.057 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_00775 5ec6a845f2b865e8d525e47703260c67 547 SUPERFAMILY SSF52029 185 376 8.37E-84 T 12-10-2018 IPR027409 GroEL-like apical domain superfamily M634_00775 5ec6a845f2b865e8d525e47703260c67 547 Gene3D G3DSA:3.30.260.10 138 410 4.0E-239 T 12-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily M634_00775 5ec6a845f2b865e8d525e47703260c67 547 SUPERFAMILY SSF54849 137 203 1.19E-23 T 12-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily M634_00775 5ec6a845f2b865e8d525e47703260c67 547 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 M634_00775 5ec6a845f2b865e8d525e47703260c67 547 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 M634_00775 5ec6a845f2b865e8d525e47703260c67 547 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 M634_00775 5ec6a845f2b865e8d525e47703260c67 547 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 M634_00775 5ec6a845f2b865e8d525e47703260c67 547 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 M634_00775 5ec6a845f2b865e8d525e47703260c67 547 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 3.0E-255 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 M634_00775 5ec6a845f2b865e8d525e47703260c67 547 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 12-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 M634_00775 5ec6a845f2b865e8d525e47703260c67 547 Hamap MF_00600 60 kDa chaperonin [groL]. 2 544 41.581 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 M634_00775 5ec6a845f2b865e8d525e47703260c67 547 Gene3D G3DSA:1.10.560.10 8 521 4.0E-239 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily M634_00775 5ec6a845f2b865e8d525e47703260c67 547 SUPERFAMILY SSF48592 7 521 3.89E-77 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily M634_00775 5ec6a845f2b865e8d525e47703260c67 547 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 2.5E-97 T 12-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 M634_00775 5ec6a845f2b865e8d525e47703260c67 547 Gene3D G3DSA:3.50.7.10 173 379 4.0E-239 T 12-10-2018 IPR027409 GroEL-like apical domain superfamily M634_19175 2896e35957f6e35113bc48c0508a53cd 201 Gene3D G3DSA:2.60.120.590 6 200 9.6E-70 T 12-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily M634_19175 2896e35957f6e35113bc48c0508a53cd 201 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 22 196 2.5E-32 T 12-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like M634_19175 2896e35957f6e35113bc48c0508a53cd 201 SUPERFAMILY SSF51197 16 199 1.28E-68 T 12-10-2018 M634_01370 067005da0bc4f69204d77c82e5568210 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 12-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_01370 067005da0bc4f69204d77c82e5568210 333 SUPERFAMILY SSF55347 152 314 1.61E-63 T 12-10-2018 M634_01370 067005da0bc4f69204d77c82e5568210 333 SUPERFAMILY SSF51735 1 173 1.9E-54 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_01370 067005da0bc4f69204d77c82e5568210 333 SMART SM00846 3 152 7.2E-73 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_01370 067005da0bc4f69204d77c82e5568210 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 323 1.2E-119 T 12-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_01370 067005da0bc4f69204d77c82e5568210 333 Gene3D G3DSA:3.30.360.10 151 315 5.3E-127 T 12-10-2018 M634_01370 067005da0bc4f69204d77c82e5568210 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 101 2.5E-32 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_01370 067005da0bc4f69204d77c82e5568210 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 108 121 1.1E-28 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_01370 067005da0bc4f69204d77c82e5568210 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 1.1E-28 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_01370 067005da0bc4f69204d77c82e5568210 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 1.1E-28 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_01370 067005da0bc4f69204d77c82e5568210 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 1.1E-28 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_01370 067005da0bc4f69204d77c82e5568210 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 1.1E-28 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_01370 067005da0bc4f69204d77c82e5568210 333 PIRSF PIRSF000149 1 331 6.8E-117 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_01370 067005da0bc4f69204d77c82e5568210 333 Gene3D G3DSA:3.40.50.720 4 327 5.3E-127 T 12-10-2018 M634_01370 067005da0bc4f69204d77c82e5568210 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 1.6E-59 T 12-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_00780 1aacc99d68a55f38a625f224dca7cfba 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 24.282 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 M634_00780 1aacc99d68a55f38a625f224dca7cfba 96 SMART SM00883 2 95 5.2E-50 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 M634_00780 1aacc99d68a55f38a625f224dca7cfba 96 SUPERFAMILY SSF50129 1 96 2.24E-31 T 12-10-2018 IPR011032 GroES-like superfamily M634_00780 1aacc99d68a55f38a625f224dca7cfba 96 Gene3D G3DSA:2.30.33.40 1 96 2.6E-36 T 12-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 M634_00780 1aacc99d68a55f38a625f224dca7cfba 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 1.7E-31 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 M634_00780 1aacc99d68a55f38a625f224dca7cfba 96 PRINTS PR00297 10kDa chaperonin signature 25 46 3.7E-27 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 M634_00780 1aacc99d68a55f38a625f224dca7cfba 96 PRINTS PR00297 10kDa chaperonin signature 3 18 3.7E-27 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 M634_00780 1aacc99d68a55f38a625f224dca7cfba 96 PRINTS PR00297 10kDa chaperonin signature 60 72 3.7E-27 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 M634_00780 1aacc99d68a55f38a625f224dca7cfba 96 PRINTS PR00297 10kDa chaperonin signature 82 95 3.7E-27 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 M634_00780 1aacc99d68a55f38a625f224dca7cfba 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 12-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 M634_21275 bf85fbd7bda15c4d9cf7bf10619397ea 509 Gene3D G3DSA:3.40.720.10 34 400 2.7E-99 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 M634_21275 bf85fbd7bda15c4d9cf7bf10619397ea 509 SUPERFAMILY SSF53649 30 472 1.34E-125 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 M634_21275 bf85fbd7bda15c4d9cf7bf10619397ea 509 Gene3D G3DSA:3.30.1120.10 401 462 2.7E-99 T 12-10-2018 M634_21275 bf85fbd7bda15c4d9cf7bf10619397ea 509 Pfam PF00884 Sulfatase 34 359 2.1E-63 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 M634_04675 feec565c169f2aad8f5dc5be2075d5b8 242 Gene3D G3DSA:3.60.140.10 1 240 3.8E-87 T 12-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily M634_04675 feec565c169f2aad8f5dc5be2075d5b8 242 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 26 240 1.9E-59 T 12-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase M634_04675 feec565c169f2aad8f5dc5be2075d5b8 242 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 19 239 8.1E-72 T 12-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase M634_04675 feec565c169f2aad8f5dc5be2075d5b8 242 SUPERFAMILY SSF64438 4 241 8.97E-83 T 12-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic M634_09450 30aaf8cd38b8df13903ccffe8beaa5a2 336 SUPERFAMILY SSF51395 1 336 2.47E-109 T 12-10-2018 M634_09450 30aaf8cd38b8df13903ccffe8beaa5a2 336 PIRSF PIRSF000164 10 336 3.9E-106 T 12-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 M634_09450 30aaf8cd38b8df13903ccffe8beaa5a2 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 12-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 M634_09450 30aaf8cd38b8df13903ccffe8beaa5a2 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 51.614 T 12-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 M634_09450 30aaf8cd38b8df13903ccffe8beaa5a2 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 12-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 M634_09450 30aaf8cd38b8df13903ccffe8beaa5a2 336 Gene3D G3DSA:3.20.20.70 2 336 2.6E-144 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_09450 30aaf8cd38b8df13903ccffe8beaa5a2 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 336 1.4E-91 T 12-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 M634_09450 30aaf8cd38b8df13903ccffe8beaa5a2 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 1.3E-146 T 12-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 M634_15345 f51de91fdff897f77a15389dda91302a 402 Gene3D G3DSA:3.50.50.60 6 339 6.6E-124 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_15345 f51de91fdff897f77a15389dda91302a 402 SUPERFAMILY SSF51905 5 385 1.04E-58 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_15345 f51de91fdff897f77a15389dda91302a 402 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 391 3.1E-138 T 12-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 M634_15345 f51de91fdff897f77a15389dda91302a 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 1.8E-18 T 12-10-2018 M634_15345 f51de91fdff897f77a15389dda91302a 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 1.8E-18 T 12-10-2018 M634_15345 f51de91fdff897f77a15389dda91302a 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 1.8E-18 T 12-10-2018 M634_15345 f51de91fdff897f77a15389dda91302a 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 1.8E-18 T 12-10-2018 M634_15345 f51de91fdff897f77a15389dda91302a 402 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 12-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 M634_15345 f51de91fdff897f77a15389dda91302a 402 Gene3D G3DSA:3.30.9.50 80 270 6.6E-124 T 12-10-2018 M634_15345 f51de91fdff897f77a15389dda91302a 402 Pfam PF01494 FAD binding domain 5 347 1.2E-28 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 M634_16985 0e42f2630c632cac0cefd18298d20031 259 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 44 160 1.7E-19 T 12-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 M634_16985 0e42f2630c632cac0cefd18298d20031 259 Gene3D G3DSA:2.60.40.10 39 161 8.3E-10 T 12-10-2018 IPR013783 Immunoglobulin-like fold M634_16985 0e42f2630c632cac0cefd18298d20031 259 SUPERFAMILY SSF49354 29 160 2.8E-25 T 12-10-2018 IPR008962 PapD-like superfamily M634_10325 136e9f0bdeaab3bb0b01d578bb564a15 160 SUPERFAMILY SSF46785 10 156 6.75E-35 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_10325 136e9f0bdeaab3bb0b01d578bb564a15 160 Pfam PF01047 MarR family 50 110 1.2E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M634_10325 136e9f0bdeaab3bb0b01d578bb564a15 160 SMART SM00347 42 145 8.7E-30 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M634_10325 136e9f0bdeaab3bb0b01d578bb564a15 160 ProSitePatterns PS01117 MarR-type HTH domain signature. 84 118 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site M634_10325 136e9f0bdeaab3bb0b01d578bb564a15 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 85 3.2E-16 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M634_10325 136e9f0bdeaab3bb0b01d578bb564a15 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 101 3.2E-16 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M634_10325 136e9f0bdeaab3bb0b01d578bb564a15 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 105 121 3.2E-16 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M634_10325 136e9f0bdeaab3bb0b01d578bb564a15 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 135 155 3.2E-16 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M634_10325 136e9f0bdeaab3bb0b01d578bb564a15 160 Gene3D G3DSA:1.10.10.10 1 160 5.9E-37 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_05755 ee63c743025416a3c57dda3bf6b1d420 157 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 6.5E-60 T 12-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC M634_05755 ee63c743025416a3c57dda3bf6b1d420 157 Gene3D G3DSA:3.90.960.10 1 157 4.4E-59 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 M634_05755 ee63c743025416a3c57dda3bf6b1d420 157 SUPERFAMILY SSF55826 2 156 9.42E-44 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 M634_05755 ee63c743025416a3c57dda3bf6b1d420 157 Pfam PF04073 Aminoacyl-tRNA editing domain 32 146 3.3E-26 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 M634_05755 ee63c743025416a3c57dda3bf6b1d420 157 PIRSF PIRSF006181 1 157 4.8E-54 T 12-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC M634_12945 ff9410ad19e48710741ec0ffbc1e72e2 616 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 327 539 2.3E-52 T 12-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 M634_12945 ff9410ad19e48710741ec0ffbc1e72e2 616 SUPERFAMILY SSF52096 53 284 8.12E-29 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily M634_12945 ff9410ad19e48710741ec0ffbc1e72e2 616 Gene3D G3DSA:3.40.1750.10 186 497 6.1E-162 T 12-10-2018 M634_12945 ff9410ad19e48710741ec0ffbc1e72e2 616 PIRSF PIRSF001217 8 616 5.9E-227 T 12-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 M634_12945 ff9410ad19e48710741ec0ffbc1e72e2 616 Gene3D G3DSA:3.90.226.10 315 540 6.1E-162 T 12-10-2018 M634_12945 ff9410ad19e48710741ec0ffbc1e72e2 616 SUPERFAMILY SSF52096 315 529 6.78E-41 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily M634_12945 ff9410ad19e48710741ec0ffbc1e72e2 616 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 608 5.6E-193 T 12-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 M634_12945 ff9410ad19e48710741ec0ffbc1e72e2 616 Gene3D G3DSA:3.90.226.10 94 314 6.1E-162 T 12-10-2018 M634_12945 ff9410ad19e48710741ec0ffbc1e72e2 616 Pfam PF01343 Peptidase family S49 391 541 2.2E-46 T 12-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 M634_12945 ff9410ad19e48710741ec0ffbc1e72e2 616 Pfam PF01343 Peptidase family S49 138 294 1.4E-30 T 12-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 M634_02015 b520a92782a0479d5136c5eccfe3192a 473 Gene3D G3DSA:2.60.40.10 357 473 1.3E-46 T 12-10-2018 IPR013783 Immunoglobulin-like fold M634_02015 b520a92782a0479d5136c5eccfe3192a 473 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 274 285 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M634_02015 b520a92782a0479d5136c5eccfe3192a 473 Pfam PF13746 4Fe-4S dicluster domain 222 326 1.3E-41 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M634_02015 b520a92782a0479d5136c5eccfe3192a 473 SUPERFAMILY SSF54862 107 336 7.28E-33 T 12-10-2018 M634_02015 b520a92782a0479d5136c5eccfe3192a 473 Pfam PF12801 4Fe-4S binding domain 97 136 2.3E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M634_02015 b520a92782a0479d5136c5eccfe3192a 473 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 43 471 4.2E-173 T 12-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 M634_02015 b520a92782a0479d5136c5eccfe3192a 473 Gene3D G3DSA:3.30.70.20 220 292 3.5E-5 T 12-10-2018 M634_02015 b520a92782a0479d5136c5eccfe3192a 473 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 358 470 2.5E-28 T 12-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain M634_21020 e3033ab234458e8b12ffa6d0526fd18b 459 SUPERFAMILY SSF141322 389 453 1.06E-8 T 12-10-2018 M634_21020 e3033ab234458e8b12ffa6d0526fd18b 459 Gene3D G3DSA:2.40.50.140 390 459 1.4E-13 T 12-10-2018 M634_21020 e3033ab234458e8b12ffa6d0526fd18b 459 Pfam PF01957 NfeD-like C-terminal, partner-binding 315 454 4.1E-34 T 12-10-2018 IPR002810 NfeD-like, C-terminal domain M634_21020 e3033ab234458e8b12ffa6d0526fd18b 459 SUPERFAMILY SSF52096 10 216 2.55E-27 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily M634_09000 b8c78cd58f915480eb7d3d2a92b45c56 326 Pfam PF16806 Antiactivator protein ExsD 52 309 1.1E-96 T 12-10-2018 IPR031835 Antiactivator protein ExsD M634_05890 b9450fee049d80b2fa1cc0a2db82576c 235 Pfam PF13860 FlgD Ig-like domain 118 184 9.5E-19 T 12-10-2018 IPR025965 FlgD Ig-like domain M634_05890 b9450fee049d80b2fa1cc0a2db82576c 235 Gene3D G3DSA:2.30.30.910 98 222 7.2E-36 T 12-10-2018 M634_05890 b9450fee049d80b2fa1cc0a2db82576c 235 Pfam PF13861 FlgD Tudor-like domain 93 229 1.9E-15 T 12-10-2018 IPR025963 FlgD Tudor-like domain M634_05890 b9450fee049d80b2fa1cc0a2db82576c 235 Gene3D G3DSA:2.60.40.4070 110 196 7.2E-36 T 12-10-2018 M634_05890 b9450fee049d80b2fa1cc0a2db82576c 235 Pfam PF03963 Flagellar hook capping protein - N-terminal region 22 85 1.4E-21 T 12-10-2018 IPR005648 Flagellar hook capping protein M634_15270 de240144151c651cf6633e4cdc70431a 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 238 4.1E-100 T 12-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 M634_15270 de240144151c651cf6633e4cdc70431a 243 Gene3D G3DSA:3.20.20.70 1 243 2.9E-109 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_15270 de240144151c651cf6633e4cdc70431a 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 7.8E-106 T 12-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 M634_15270 de240144151c651cf6633e4cdc70431a 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 133.839 T 12-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 M634_15270 de240144151c651cf6633e4cdc70431a 243 SUPERFAMILY SSF63892 4 241 2.75E-102 T 12-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 M634_02985 5a1594c080db8f5e872c950c62bbaeb3 351 Gene3D G3DSA:3.40.50.2000 159 346 5.1E-37 T 12-10-2018 M634_02985 5a1594c080db8f5e872c950c62bbaeb3 351 Gene3D G3DSA:3.40.50.2000 4 155 5.0E-23 T 12-10-2018 M634_02985 5a1594c080db8f5e872c950c62bbaeb3 351 SUPERFAMILY SSF53756 9 343 4.24E-79 T 12-10-2018 M634_02985 5a1594c080db8f5e872c950c62bbaeb3 351 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 73 309 3.3E-52 T 12-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 M634_24480 d155967e93494ee614c7bf76db3c98e1 986 Gene3D G3DSA:2.150.10.10 730 773 7.1E-11 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal M634_24480 d155967e93494ee614c7bf76db3c98e1 986 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 713 731 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site M634_24480 d155967e93494ee614c7bf76db3c98e1 986 Pfam PF02382 RTX N-terminal domain 7 622 2.6E-271 T 12-10-2018 IPR018504 RTX N-terminal GO:0005509|GO:0005576|GO:0009405 M634_24480 d155967e93494ee614c7bf76db3c98e1 986 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 722 740 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site M634_24480 d155967e93494ee614c7bf76db3c98e1 986 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 717 733 0.0015 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 M634_24480 d155967e93494ee614c7bf76db3c98e1 986 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 783 799 0.0098 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 M634_24480 d155967e93494ee614c7bf76db3c98e1 986 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 699 715 0.3 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 M634_24480 d155967e93494ee614c7bf76db3c98e1 986 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 752 768 0.093 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 M634_24480 d155967e93494ee614c7bf76db3c98e1 986 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 735 751 0.0097 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 M634_24480 d155967e93494ee614c7bf76db3c98e1 986 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 801 816 0.095 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 M634_24480 d155967e93494ee614c7bf76db3c98e1 986 Pfam PF08339 RTX C-terminal domain 839 975 9.5E-10 T 12-10-2018 IPR013550 RTX, C-terminal M634_24480 d155967e93494ee614c7bf76db3c98e1 986 Gene3D G3DSA:2.150.10.10 774 919 1.4E-25 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal M634_24480 d155967e93494ee614c7bf76db3c98e1 986 PRINTS PR00313 NodO calcium binding signature 783 791 1.4E-11 T 12-10-2018 M634_24480 d155967e93494ee614c7bf76db3c98e1 986 PRINTS PR00313 NodO calcium binding signature 762 770 1.4E-11 T 12-10-2018 M634_24480 d155967e93494ee614c7bf76db3c98e1 986 PRINTS PR00313 NodO calcium binding signature 810 819 1.4E-11 T 12-10-2018 M634_24480 d155967e93494ee614c7bf76db3c98e1 986 PRINTS PR00313 NodO calcium binding signature 732 743 1.4E-11 T 12-10-2018 M634_24480 d155967e93494ee614c7bf76db3c98e1 986 Gene3D G3DSA:2.150.10.10 648 729 2.5E-11 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal M634_24480 d155967e93494ee614c7bf76db3c98e1 986 SUPERFAMILY SSF51120 580 774 9.72E-22 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal M634_24480 d155967e93494ee614c7bf76db3c98e1 986 SUPERFAMILY SSF51120 751 869 3.66E-19 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal M634_24480 d155967e93494ee614c7bf76db3c98e1 986 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 797 815 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site M634_24480 d155967e93494ee614c7bf76db3c98e1 986 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 708 729 1.7E-83 T 12-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 M634_24480 d155967e93494ee614c7bf76db3c98e1 986 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 369 389 1.7E-83 T 12-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 M634_24480 d155967e93494ee614c7bf76db3c98e1 986 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 457 478 1.7E-83 T 12-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 M634_24480 d155967e93494ee614c7bf76db3c98e1 986 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 404 420 1.7E-83 T 12-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 M634_24480 d155967e93494ee614c7bf76db3c98e1 986 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 511 535 1.7E-83 T 12-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 M634_24480 d155967e93494ee614c7bf76db3c98e1 986 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 247 268 1.7E-83 T 12-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 M634_24480 d155967e93494ee614c7bf76db3c98e1 986 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 313 331 1.7E-83 T 12-10-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 M634_24480 d155967e93494ee614c7bf76db3c98e1 986 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 788 806 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site M634_24480 d155967e93494ee614c7bf76db3c98e1 986 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 731 749 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site M634_15155 84478de520e13c85d4054d4cf84fd9d1 65 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 58 4.4E-30 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 M634_15155 84478de520e13c85d4054d4cf84fd9d1 65 Gene3D G3DSA:3.30.70.1680 1 59 8.5E-30 T 12-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 M634_15155 84478de520e13c85d4054d4cf84fd9d1 65 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 4.0E-20 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 M634_15155 84478de520e13c85d4054d4cf84fd9d1 65 SUPERFAMILY SSF117130 1 54 6.93E-21 T 12-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 M634_15155 84478de520e13c85d4054d4cf84fd9d1 65 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 63 17.074 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 M634_15155 84478de520e13c85d4054d4cf84fd9d1 65 Pfam PF02599 Global regulator protein family 1 52 2.0E-26 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 M634_21505 dd2653680082b51b8dac6cc6461647bf 283 Pfam PF00665 Integrase core domain 121 234 2.5E-33 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M634_21505 dd2653680082b51b8dac6cc6461647bf 283 Gene3D G3DSA:3.30.420.10 118 271 9.3E-19 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M634_21505 dd2653680082b51b8dac6cc6461647bf 283 Pfam PF13276 HTH-like domain 45 96 3.6E-9 T 12-10-2018 IPR025948 HTH-like domain M634_21505 dd2653680082b51b8dac6cc6461647bf 283 SUPERFAMILY SSF53098 121 280 2.28E-43 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M634_00160 063f2a64976f1cdb0f17bf118c512081 254 Pfam PF04338 Protein of unknown function, DUF481 39 254 3.6E-53 T 12-10-2018 IPR007433 Protein of unknown function DUF481 M634_00160 063f2a64976f1cdb0f17bf118c512081 254 SUPERFAMILY SSF56935 36 208 6.92E-5 T 12-10-2018 M634_06955 fc1333f4bddac08923c0f74664701605 166 Gene3D G3DSA:1.10.3190.10 54 166 1.7E-36 T 12-10-2018 IPR023146 YfbU, alpha-helical bundle domain superfamily M634_06955 fc1333f4bddac08923c0f74664701605 166 Pfam PF03887 YfbU domain 1 166 2.2E-70 T 12-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU M634_06955 fc1333f4bddac08923c0f74664701605 166 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 166 8.0E-96 T 12-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU M634_06955 fc1333f4bddac08923c0f74664701605 166 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 166 37.917 T 12-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU M634_06955 fc1333f4bddac08923c0f74664701605 166 SUPERFAMILY SSF116960 1 166 1.22E-65 T 12-10-2018 M634_06955 fc1333f4bddac08923c0f74664701605 166 Gene3D G3DSA:1.10.287.680 1 53 9.2E-33 T 12-10-2018 IPR023145 YfbU, helix-hairpin domain superfamily M634_06955 fc1333f4bddac08923c0f74664701605 166 PIRSF PIRSF006272 1 166 7.9E-79 T 12-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU M634_05505 fd1d5cd928221818e467192a2eb3fd01 392 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 283 373 1.4E-28 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M634_05505 fd1d5cd928221818e467192a2eb3fd01 392 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 33 263 1.8E-94 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 M634_05505 fd1d5cd928221818e467192a2eb3fd01 392 SUPERFAMILY SSF56601 11 283 4.01E-84 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like M634_05505 fd1d5cd928221818e467192a2eb3fd01 392 SUPERFAMILY SSF69189 283 375 5.1E-28 T 12-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M634_05505 fd1d5cd928221818e467192a2eb3fd01 392 Gene3D G3DSA:3.40.710.10 27 282 1.5E-89 T 12-10-2018 M634_05505 fd1d5cd928221818e467192a2eb3fd01 392 Gene3D G3DSA:2.60.410.10 283 373 2.1E-30 T 12-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M634_05505 fd1d5cd928221818e467192a2eb3fd01 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 122 139 2.6E-17 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 M634_05505 fd1d5cd928221818e467192a2eb3fd01 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 149 162 2.6E-17 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 M634_05505 fd1d5cd928221818e467192a2eb3fd01 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 66 77 2.6E-17 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 M634_05505 fd1d5cd928221818e467192a2eb3fd01 392 SMART SM00936 283 373 7.1E-38 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 M634_04170 c0043ac3ce8f7658ac1ae11f4219df94 493 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 5 489 33.833 T 12-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 M634_04170 c0043ac3ce8f7658ac1ae11f4219df94 493 Pfam PF08245 Mur ligase middle domain 115 316 1.4E-50 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 M634_04170 c0043ac3ce8f7658ac1ae11f4219df94 493 Pfam PF02875 Mur ligase family, glutamate ligase domain 339 419 6.5E-24 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 M634_04170 c0043ac3ce8f7658ac1ae11f4219df94 493 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 25 489 2.0E-169 T 12-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 M634_04170 c0043ac3ce8f7658ac1ae11f4219df94 493 Gene3D G3DSA:3.90.190.20 340 491 2.9E-54 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 M634_04170 c0043ac3ce8f7658ac1ae11f4219df94 493 Gene3D G3DSA:3.40.1390.10 4 106 9.1E-26 T 12-10-2018 M634_04170 c0043ac3ce8f7658ac1ae11f4219df94 493 SUPERFAMILY SSF53244 338 489 9.01E-49 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 M634_04170 c0043ac3ce8f7658ac1ae11f4219df94 493 Gene3D G3DSA:3.40.1190.10 108 339 1.1E-79 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 M634_04170 c0043ac3ce8f7658ac1ae11f4219df94 493 SUPERFAMILY SSF63418 11 105 1.83E-21 T 12-10-2018 IPR035911 MurE/MurF, N-terminal M634_04170 c0043ac3ce8f7658ac1ae11f4219df94 493 Pfam PF01225 Mur ligase family, catalytic domain 26 102 2.1E-11 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 M634_04170 c0043ac3ce8f7658ac1ae11f4219df94 493 SUPERFAMILY SSF53623 109 336 6.02E-73 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 M634_20495 72b0597ac20093bcc0031f231c96c02f 223 Pfam PF08239 Bacterial SH3 domain 73 130 1.8E-8 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type M634_20495 72b0597ac20093bcc0031f231c96c02f 223 Gene3D G3DSA:2.30.30.40 63 142 8.8E-7 T 12-10-2018 M634_08385 a98de050763c840ae79404b3c8127f45 257 Gene3D G3DSA:3.30.460.10 62 192 1.6E-6 T 12-10-2018 M634_08385 a98de050763c840ae79404b3c8127f45 257 SUPERFAMILY SSF81301 63 215 9.16E-16 T 12-10-2018 M634_00725 b661bce73a5130d9e6b24dbb0c6b45a9 246 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 111 1.6E-32 T 12-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 M634_00725 b661bce73a5130d9e6b24dbb0c6b45a9 246 SUPERFAMILY SSF54292 5 106 1.04E-29 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 M634_00725 b661bce73a5130d9e6b24dbb0c6b45a9 246 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M634_00725 b661bce73a5130d9e6b24dbb0c6b45a9 246 Gene3D G3DSA:3.10.20.30 1 106 3.8E-35 T 12-10-2018 IPR012675 Beta-grasp domain superfamily M634_00725 b661bce73a5130d9e6b24dbb0c6b45a9 246 Gene3D G3DSA:1.10.1060.10 107 244 1.8E-50 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 M634_00725 b661bce73a5130d9e6b24dbb0c6b45a9 246 Pfam PF13183 4Fe-4S dicluster domain 147 219 5.9E-11 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M634_00725 b661bce73a5130d9e6b24dbb0c6b45a9 246 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 M634_00725 b661bce73a5130d9e6b24dbb0c6b45a9 246 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 4.0E-95 T 12-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 M634_00725 b661bce73a5130d9e6b24dbb0c6b45a9 246 SUPERFAMILY SSF46548 107 226 6.1E-31 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 M634_08575 6f67fd344134490bede15527e8b39744 324 Gene3D G3DSA:3.30.1780.10 5 315 1.3E-77 T 12-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 M634_08575 6f67fd344134490bede15527e8b39744 324 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 3 314 6.0E-53 T 12-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 M634_08575 6f67fd344134490bede15527e8b39744 324 PIRSF PIRSF001439 1 322 2.5E-64 T 12-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 M634_08575 6f67fd344134490bede15527e8b39744 324 Gene3D G3DSA:3.40.50.720 119 302 1.3E-77 T 12-10-2018 M634_08575 6f67fd344134490bede15527e8b39744 324 SUPERFAMILY SSF51735 1 315 2.21E-81 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_08140 f67447f65f75e9cecea2ac3cdbeaea1e 443 Gene3D G3DSA:3.40.50.1100 116 238 4.0E-194 T 12-10-2018 M634_08140 f67447f65f75e9cecea2ac3cdbeaea1e 443 SUPERFAMILY SSF53686 74 431 1.21E-56 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme M634_08140 f67447f65f75e9cecea2ac3cdbeaea1e 443 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 12 438 4.3E-219 T 12-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 M634_08140 f67447f65f75e9cecea2ac3cdbeaea1e 443 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 443 270.857 T 12-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 M634_08140 f67447f65f75e9cecea2ac3cdbeaea1e 443 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 76 403 2.7E-63 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme M634_08140 f67447f65f75e9cecea2ac3cdbeaea1e 443 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 108 122 - T 12-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 M634_08140 f67447f65f75e9cecea2ac3cdbeaea1e 443 Gene3D G3DSA:3.40.50.1100 24 438 4.0E-194 T 12-10-2018 M634_12410 29c6315e9a800c56680ffd0f8b5df253 488 Pfam PF00209 Sodium:neurotransmitter symporter family 3 121 2.0E-39 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 M634_12410 29c6315e9a800c56680ffd0f8b5df253 488 Pfam PF00209 Sodium:neurotransmitter symporter family 123 462 1.4E-76 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 M634_12410 29c6315e9a800c56680ffd0f8b5df253 488 SUPERFAMILY SSF161070 3 475 4.97E-148 T 12-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 M634_12410 29c6315e9a800c56680ffd0f8b5df253 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 257 277 2.6E-36 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 M634_12410 29c6315e9a800c56680ffd0f8b5df253 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 11 32 2.6E-36 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 M634_12410 29c6315e9a800c56680ffd0f8b5df253 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 84 110 2.6E-36 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 M634_12410 29c6315e9a800c56680ffd0f8b5df253 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 40 59 2.6E-36 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 M634_12410 29c6315e9a800c56680ffd0f8b5df253 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 429 449 2.6E-36 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 M634_12410 29c6315e9a800c56680ffd0f8b5df253 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 388 408 2.6E-36 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 M634_12410 29c6315e9a800c56680ffd0f8b5df253 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 311 330 2.6E-36 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 M634_12410 29c6315e9a800c56680ffd0f8b5df253 488 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 27 41 - T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 M634_15105 f27443ece4c1bf72cc9b3ab334e5bfa0 85 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 5 81 6.2E-21 T 12-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 M634_15105 f27443ece4c1bf72cc9b3ab334e5bfa0 85 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 10 80 1.8E-19 T 12-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 M634_15105 f27443ece4c1bf72cc9b3ab334e5bfa0 85 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 85 35.705 T 12-10-2018 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3 M634_03535 0c53c730c41101d3aed64d9f1047303b 115 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 5 112 1.5E-25 T 12-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like M634_03535 0c53c730c41101d3aed64d9f1047303b 115 SUPERFAMILY SSF110857 3 114 5.36E-33 T 12-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily M634_03535 0c53c730c41101d3aed64d9f1047303b 115 Gene3D G3DSA:3.10.490.10 4 115 6.5E-38 T 12-10-2018 M634_17895 70c0d3176bbe9d89798f8ddd4295c027 318 SUPERFAMILY SSF46785 4 88 9.92E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_17895 70c0d3176bbe9d89798f8ddd4295c027 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.8E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_17895 70c0d3176bbe9d89798f8ddd4295c027 318 Gene3D G3DSA:1.10.10.10 3 89 2.7E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_17895 70c0d3176bbe9d89798f8ddd4295c027 318 Gene3D G3DSA:3.40.190.290 91 294 3.3E-59 T 12-10-2018 M634_17895 70c0d3176bbe9d89798f8ddd4295c027 318 Pfam PF03466 LysR substrate binding domain 89 293 5.4E-36 T 12-10-2018 IPR005119 LysR, substrate-binding M634_17895 70c0d3176bbe9d89798f8ddd4295c027 318 SUPERFAMILY SSF53850 90 297 8.69E-41 T 12-10-2018 M634_01455 59bbb14fbf237ac1f20bfca77c4bc977 842 Pfam PF12633 Adenylate cyclase NT domain 7 198 4.5E-77 T 12-10-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 M634_01455 59bbb14fbf237ac1f20bfca77c4bc977 842 PIRSF PIRSF001444 1 842 0.0 T 12-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 M634_01455 59bbb14fbf237ac1f20bfca77c4bc977 842 Pfam PF01295 Adenylate cyclase, class-I 226 828 1.1E-255 T 12-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 M634_19050 52211098a3bb7855019aab1fa198257d 707 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 24 696 4.8E-209 T 12-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ M634_19050 52211098a3bb7855019aab1fa198257d 707 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 123 615 3.2E-72 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit M634_02110 c225c6e09da79456193e0b0a195dcfd5 305 SUPERFAMILY SSF102886 6 305 1.15E-136 T 12-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 M634_02110 c225c6e09da79456193e0b0a195dcfd5 305 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 170 194 - T 12-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 M634_02110 c225c6e09da79456193e0b0a195dcfd5 305 Gene3D G3DSA:3.40.1500.10 1 305 4.4E-136 T 12-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 M634_02110 c225c6e09da79456193e0b0a195dcfd5 305 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 281 55.541 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 M634_02110 c225c6e09da79456193e0b0a195dcfd5 305 Pfam PF01218 Coproporphyrinogen III oxidase 9 305 4.6E-131 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 M634_02110 c225c6e09da79456193e0b0a195dcfd5 305 PRINTS PR00073 Coprogen oxidase signature 129 151 5.5E-70 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 M634_02110 c225c6e09da79456193e0b0a195dcfd5 305 PRINTS PR00073 Coprogen oxidase signature 238 265 5.5E-70 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 M634_02110 c225c6e09da79456193e0b0a195dcfd5 305 PRINTS PR00073 Coprogen oxidase signature 94 118 5.5E-70 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 M634_02110 c225c6e09da79456193e0b0a195dcfd5 305 PRINTS PR00073 Coprogen oxidase signature 31 47 5.5E-70 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 M634_02110 c225c6e09da79456193e0b0a195dcfd5 305 PRINTS PR00073 Coprogen oxidase signature 166 195 5.5E-70 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 M634_02110 c225c6e09da79456193e0b0a195dcfd5 305 PRINTS PR00073 Coprogen oxidase signature 266 292 5.5E-70 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 M634_02110 c225c6e09da79456193e0b0a195dcfd5 305 PIRSF PIRSF000166 2 305 3.5E-128 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 M634_08665 773fd03a7f61b0f9a06a4ea845755d88 219 Pfam PF10881 Protein of unknown function (DUF2726) 38 160 2.4E-34 T 12-10-2018 IPR024402 Domain of unknown function DUF2726 M634_08665 773fd03a7f61b0f9a06a4ea845755d88 219 PIRSF PIRSF028063 1 219 2.0E-142 T 12-10-2018 IPR014538 Uncharacterised conserved protein, topoisomerase zinc finger M634_07120 4aad85a9e34ae658a61b6d4a43f5aab7 485 Pfam PF00534 Glycosyl transferases group 1 298 446 1.3E-15 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 M634_07120 4aad85a9e34ae658a61b6d4a43f5aab7 485 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 7 482 2.1E-168 T 12-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 M634_07120 4aad85a9e34ae658a61b6d4a43f5aab7 485 Gene3D G3DSA:3.40.50.2000 256 467 1.6E-155 T 12-10-2018 M634_07120 4aad85a9e34ae658a61b6d4a43f5aab7 485 SUPERFAMILY SSF53756 4 485 1.07E-109 T 12-10-2018 M634_07120 4aad85a9e34ae658a61b6d4a43f5aab7 485 Pfam PF08323 Starch synthase catalytic domain 8 239 3.1E-66 T 12-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 M634_07120 4aad85a9e34ae658a61b6d4a43f5aab7 485 Hamap MF_00484 Glycogen synthase [glgA]. 6 483 39.324 T 12-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 M634_07120 4aad85a9e34ae658a61b6d4a43f5aab7 485 Gene3D G3DSA:3.40.50.2000 8 481 1.6E-155 T 12-10-2018 M634_23725 198adf07bd88939759df074fec40dd0f 159 ProSitePatterns PS00819 Dps protein family signature 2. 66 80 - T 12-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 M634_23725 198adf07bd88939759df074fec40dd0f 159 PIRSF PIRSF005900 1 159 3.7E-45 T 12-10-2018 IPR002177 DNA-binding protein Dps M634_23725 198adf07bd88939759df074fec40dd0f 159 Gene3D G3DSA:1.20.1260.10 2 158 3.2E-54 T 12-10-2018 IPR012347 Ferritin-like M634_23725 198adf07bd88939759df074fec40dd0f 159 ProSitePatterns PS00818 Dps protein family signature 1. 40 56 - T 12-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 M634_23725 198adf07bd88939759df074fec40dd0f 159 Pfam PF00210 Ferritin-like domain 20 158 1.9E-24 T 12-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 M634_23725 198adf07bd88939759df074fec40dd0f 159 SUPERFAMILY SSF47240 5 158 3.02E-44 T 12-10-2018 IPR009078 Ferritin-like superfamily M634_23725 198adf07bd88939759df074fec40dd0f 159 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 64 80 1.0E-13 T 12-10-2018 IPR002177 DNA-binding protein Dps M634_23725 198adf07bd88939759df074fec40dd0f 159 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 135 153 1.0E-13 T 12-10-2018 IPR002177 DNA-binding protein Dps M634_23725 198adf07bd88939759df074fec40dd0f 159 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 40 56 1.0E-13 T 12-10-2018 IPR002177 DNA-binding protein Dps M634_08870 3601af1386e7ce47f6c6f02e9d8ea94b 181 SUPERFAMILY SSF55729 27 146 1.15E-18 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_08870 3601af1386e7ce47f6c6f02e9d8ea94b 181 Gene3D G3DSA:3.40.630.30 24 181 5.5E-41 T 12-10-2018 M634_08870 3601af1386e7ce47f6c6f02e9d8ea94b 181 TIGRFAM TIGR02406 ectoine_EctA: diaminobutyrate acetyltransferase 27 180 2.4E-69 T 12-10-2018 IPR012772 L-2,4-diaminobutyric acid acetyltransferase GO:0019491|GO:0033816 KEGG: 00260+2.3.1.178 M634_08870 3601af1386e7ce47f6c6f02e9d8ea94b 181 Pfam PF00583 Acetyltransferase (GNAT) family 61 146 7.2E-15 T 12-10-2018 IPR000182 GNAT domain M634_01610 3547c01d2b07e854997dc76d47021a3b 288 Hamap MF_00697 UPF0276 protein . 10 282 43.929 T 12-10-2018 IPR007801 Uncharacterised protein family UPF0276 M634_01610 3547c01d2b07e854997dc76d47021a3b 288 SUPERFAMILY SSF51658 30 256 1.93E-11 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily M634_01610 3547c01d2b07e854997dc76d47021a3b 288 Gene3D G3DSA:3.20.20.150 8 284 5.9E-85 T 12-10-2018 M634_01610 3547c01d2b07e854997dc76d47021a3b 288 Pfam PF05114 Protein of unknown function (DUF692) 10 272 4.4E-105 T 12-10-2018 IPR007801 Uncharacterised protein family UPF0276 M634_03360 373e78b454ba8d0fb118e3d8020ad1d1 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 25.541 T 12-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_03360 373e78b454ba8d0fb118e3d8020ad1d1 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 8.5E-44 T 12-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_03360 373e78b454ba8d0fb118e3d8020ad1d1 117 Gene3D G3DSA:3.30.420.100 1 117 7.8E-44 T 12-10-2018 M634_03360 373e78b454ba8d0fb118e3d8020ad1d1 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 8.8E-43 T 12-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03360 373e78b454ba8d0fb118e3d8020ad1d1 117 SUPERFAMILY SSF53137 3 115 6.54E-51 T 12-10-2018 M634_14510 9893eaa88abd7c5db6e2e91479f5bb8a 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.6E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_14510 9893eaa88abd7c5db6e2e91479f5bb8a 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.6E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_14510 9893eaa88abd7c5db6e2e91479f5bb8a 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.6E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_14510 9893eaa88abd7c5db6e2e91479f5bb8a 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 3.9E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_14510 9893eaa88abd7c5db6e2e91479f5bb8a 308 Pfam PF03466 LysR substrate binding domain 94 289 1.1E-28 T 12-10-2018 IPR005119 LysR, substrate-binding M634_14510 9893eaa88abd7c5db6e2e91479f5bb8a 308 Gene3D G3DSA:3.40.190.10 103 286 4.0E-44 T 12-10-2018 M634_14510 9893eaa88abd7c5db6e2e91479f5bb8a 308 SUPERFAMILY SSF53850 95 292 4.89E-35 T 12-10-2018 M634_14510 9893eaa88abd7c5db6e2e91479f5bb8a 308 Gene3D G3DSA:1.10.10.10 7 94 7.5E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_14510 9893eaa88abd7c5db6e2e91479f5bb8a 308 SUPERFAMILY SSF46785 4 87 1.03E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_14510 9893eaa88abd7c5db6e2e91479f5bb8a 308 Gene3D G3DSA:3.40.190.10 163 259 4.0E-44 T 12-10-2018 M634_17380 b24a8f1ff0661493db4e0fc8aec1f83b 217 SUPERFAMILY SSF55469 1 216 2.09E-66 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 M634_17380 b24a8f1ff0661493db4e0fc8aec1f83b 217 Pfam PF00881 Nitroreductase family 8 193 8.5E-27 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 M634_17380 b24a8f1ff0661493db4e0fc8aec1f83b 217 Gene3D G3DSA:3.40.109.10 1 217 1.1E-62 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 M634_08510 ac062739206986fe202f99bac2353385 238 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 3 228 3.1E-43 T 12-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 M634_08510 ac062739206986fe202f99bac2353385 238 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 104 111 - T 12-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 M634_08510 ac062739206986fe202f99bac2353385 238 Gene3D G3DSA:3.90.550.10 1 236 2.5E-65 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M634_08510 ac062739206986fe202f99bac2353385 238 Hamap MF_02068 Ribitol-5-phosphate cytidylyltransferase [tarI]. 1 231 43.533 T 12-10-2018 IPR034709 Ribitol-5-phosphate cytidylyltransferase GO:0047349 KEGG: 00040+2.7.7.40|KEGG: 00515+2.7.7.40|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7818|MetaCyc: PWY-7981 M634_08510 ac062739206986fe202f99bac2353385 238 SUPERFAMILY SSF53448 2 228 2.38E-47 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M634_23060 d2cd57fdd2272641eb81483e1bc0d3a4 855 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 24 75 4.2E-6 T 12-10-2018 IPR004176 Clp, N-terminal M634_23060 d2cd57fdd2272641eb81483e1bc0d3a4 855 SUPERFAMILY SSF52540 168 500 3.73E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_23060 d2cd57fdd2272641eb81483e1bc0d3a4 855 Pfam PF07724 AAA domain (Cdc48 subfamily) 588 753 1.8E-38 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 M634_23060 d2cd57fdd2272641eb81483e1bc0d3a4 855 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 304 316 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 M634_23060 d2cd57fdd2272641eb81483e1bc0d3a4 855 SMART SM00382 208 354 1.2E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_23060 d2cd57fdd2272641eb81483e1bc0d3a4 855 SMART SM00382 588 758 1.4E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_23060 d2cd57fdd2272641eb81483e1bc0d3a4 855 SMART SM01086 760 852 2.1E-4 T 12-10-2018 IPR019489 Clp ATPase, C-terminal M634_23060 d2cd57fdd2272641eb81483e1bc0d3a4 855 Gene3D G3DSA:3.40.50.300 354 535 2.1E-40 T 12-10-2018 M634_23060 d2cd57fdd2272641eb81483e1bc0d3a4 855 Gene3D G3DSA:3.40.50.300 541 757 2.3E-64 T 12-10-2018 M634_23060 d2cd57fdd2272641eb81483e1bc0d3a4 855 SUPERFAMILY SSF81923 11 140 9.81E-17 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 M634_23060 d2cd57fdd2272641eb81483e1bc0d3a4 855 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 666 684 3.6E-31 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 M634_23060 d2cd57fdd2272641eb81483e1bc0d3a4 855 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 699 713 3.6E-31 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 M634_23060 d2cd57fdd2272641eb81483e1bc0d3a4 855 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 592 610 3.6E-31 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 M634_23060 d2cd57fdd2272641eb81483e1bc0d3a4 855 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 637 655 3.6E-31 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 M634_23060 d2cd57fdd2272641eb81483e1bc0d3a4 855 Gene3D G3DSA:3.40.50.300 158 352 7.2E-64 T 12-10-2018 M634_23060 d2cd57fdd2272641eb81483e1bc0d3a4 855 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 760 832 6.9E-10 T 12-10-2018 IPR019489 Clp ATPase, C-terminal M634_23060 d2cd57fdd2272641eb81483e1bc0d3a4 855 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 213 326 1.7E-9 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 M634_23060 d2cd57fdd2272641eb81483e1bc0d3a4 855 Gene3D G3DSA:1.10.1780.10 1 156 1.3E-34 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 M634_23060 d2cd57fdd2272641eb81483e1bc0d3a4 855 Gene3D G3DSA:1.10.8.60 760 853 1.5E-9 T 12-10-2018 M634_23060 d2cd57fdd2272641eb81483e1bc0d3a4 855 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 844 0.0 T 12-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 M634_23060 d2cd57fdd2272641eb81483e1bc0d3a4 855 SUPERFAMILY SSF52540 537 832 5.69E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_03700 2d8efea49f702926ebb67032cc6b11c6 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 248 267 - T 12-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 M634_03700 2d8efea49f702926ebb67032cc6b11c6 363 SMART SM01329 7 356 1.7E-203 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 M634_03700 2d8efea49f702926ebb67032cc6b11c6 363 SUPERFAMILY SSF53659 4 361 2.5E-123 T 12-10-2018 M634_03700 2d8efea49f702926ebb67032cc6b11c6 363 Gene3D G3DSA:3.40.718.10 1 363 2.3E-157 T 12-10-2018 M634_03700 2d8efea49f702926ebb67032cc6b11c6 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 7 355 5.4E-165 T 12-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 M634_03700 2d8efea49f702926ebb67032cc6b11c6 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 6 360 51.311 T 12-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 M634_03700 2d8efea49f702926ebb67032cc6b11c6 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 356 2.9E-136 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 M634_15370 5eade8253bf35bff86e568da4c68c075 218 SUPERFAMILY SSF100950 1 146 6.51E-47 T 12-10-2018 IPR037171 NagB/RpiA transferase-like M634_15370 5eade8253bf35bff86e568da4c68c075 218 SUPERFAMILY SSF75445 127 198 7.19E-24 T 12-10-2018 M634_15370 5eade8253bf35bff86e568da4c68c075 218 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 33.515 T 12-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 M634_15370 5eade8253bf35bff86e568da4c68c075 218 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 214 9.8E-69 T 12-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 M634_15370 5eade8253bf35bff86e568da4c68c075 218 Gene3D G3DSA:3.30.70.260 125 196 1.3E-78 T 12-10-2018 M634_15370 5eade8253bf35bff86e568da4c68c075 218 Gene3D G3DSA:3.40.50.1360 7 207 1.3E-78 T 12-10-2018 M634_15370 5eade8253bf35bff86e568da4c68c075 218 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 1.6E-58 T 12-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 M634_17725 31214b435511016db267ff4ef8f25cb3 628 Gene3D G3DSA:3.30.450.20 66 171 1.7E-29 T 12-10-2018 M634_17725 31214b435511016db267ff4ef8f25cb3 628 Pfam PF02743 Cache domain 40 257 3.9E-24 T 12-10-2018 IPR033479 Double Cache domain 1 M634_17725 31214b435511016db267ff4ef8f25cb3 628 SUPERFAMILY SSF58104 318 627 1.83E-77 T 12-10-2018 M634_17725 31214b435511016db267ff4ef8f25cb3 628 SMART SM00304 296 350 2.7E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_17725 31214b435511016db267ff4ef8f25cb3 628 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 429 594 1.4E-40 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_17725 31214b435511016db267ff4ef8f25cb3 628 Gene3D G3DSA:1.10.287.950 296 628 1.2E-75 T 12-10-2018 M634_17725 31214b435511016db267ff4ef8f25cb3 628 SMART SM00283 365 626 7.4E-73 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_17725 31214b435511016db267ff4ef8f25cb3 628 Gene3D G3DSA:3.30.450.20 53 269 1.7E-29 T 12-10-2018 M634_17725 31214b435511016db267ff4ef8f25cb3 628 Pfam PF00672 HAMP domain 300 347 8.6E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_23110 07dc83a10b0d846c9d18864da8a70b03 231 PIRSF PIRSF029287 2 230 8.6E-32 T 12-10-2018 IPR017748 T6S-associated protein TagF M634_23110 07dc83a10b0d846c9d18864da8a70b03 231 Gene3D G3DSA:3.40.1730.10 8 230 1.3E-58 T 12-10-2018 IPR038225 T6S-associated protein TagF superfamily M634_23110 07dc83a10b0d846c9d18864da8a70b03 231 TIGRFAM TIGR03373 VI_minor_4: type VI secretion-associated protein, BMA_A0400 family 11 141 1.2E-44 T 12-10-2018 IPR017748 T6S-associated protein TagF M634_23110 07dc83a10b0d846c9d18864da8a70b03 231 Pfam PF09867 Uncharacterized protein conserved in bacteria (DUF2094) 11 140 9.4E-39 T 12-10-2018 IPR017748 T6S-associated protein TagF M634_22340 7b057229ef86f359af497b60110cfa48 230 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_22340 7b057229ef86f359af497b60110cfa48 230 SMART SM00382 39 225 8.1E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_22340 7b057229ef86f359af497b60110cfa48 230 SUPERFAMILY SSF52540 12 228 2.48E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_22340 7b057229ef86f359af497b60110cfa48 230 Pfam PF00005 ABC transporter 30 176 1.8E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_22340 7b057229ef86f359af497b60110cfa48 230 Gene3D G3DSA:3.40.50.300 9 230 6.9E-71 T 12-10-2018 M634_08530 8e89598d8b340a689e4ec09778687640 375 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 56 366 54.3 T 12-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 M634_08530 8e89598d8b340a689e4ec09778687640 375 PIRSF PIRSF029038 45 375 8.5E-163 T 12-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 M634_08530 8e89598d8b340a689e4ec09778687640 375 SUPERFAMILY SSF53335 94 363 1.99E-33 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_08530 8e89598d8b340a689e4ec09778687640 375 Gene3D G3DSA:3.40.50.150 89 364 1.5E-79 T 12-10-2018 M634_08530 8e89598d8b340a689e4ec09778687640 375 Pfam PF05971 Protein of unknown function (DUF890) 55 364 3.2E-129 T 12-10-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 M634_18525 f88c5d6d9af2bea0c8ba5b66b09ee217 257 Gene3D G3DSA:2.40.30.10 1 119 3.4E-33 T 12-10-2018 M634_18525 f88c5d6d9af2bea0c8ba5b66b09ee217 257 SUPERFAMILY SSF63380 6 117 6.99E-11 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel M634_18525 f88c5d6d9af2bea0c8ba5b66b09ee217 257 Pfam PF04954 Siderophore-interacting protein 127 239 1.2E-31 T 12-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain M634_18525 f88c5d6d9af2bea0c8ba5b66b09ee217 257 Gene3D G3DSA:3.40.50.80 122 257 2.2E-45 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M634_18525 f88c5d6d9af2bea0c8ba5b66b09ee217 257 Pfam PF08021 Siderophore-interacting FAD-binding domain 12 119 1.7E-33 T 12-10-2018 IPR013113 FAD-binding 9, siderophore-interacting M634_14200 042fc5c9328c1ba417c8aa1e93a06af6 266 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 30 266 3.9E-100 T 12-10-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 M634_14200 042fc5c9328c1ba417c8aa1e93a06af6 266 SUPERFAMILY SSF111364 30 266 6.54E-83 T 12-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 M634_14200 042fc5c9328c1ba417c8aa1e93a06af6 266 Gene3D G3DSA:2.40.230.20 23 266 2.6E-80 T 12-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 M634_14200 042fc5c9328c1ba417c8aa1e93a06af6 266 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 109 129 6.7E-6 T 12-10-2018 IPR003055 Nucleoside-specific channel-forming protein Tsx GO:0005337|GO:0009279 M634_14200 042fc5c9328c1ba417c8aa1e93a06af6 266 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 52 76 6.7E-6 T 12-10-2018 IPR003055 Nucleoside-specific channel-forming protein Tsx GO:0005337|GO:0009279 M634_14200 042fc5c9328c1ba417c8aa1e93a06af6 266 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 172 195 6.7E-6 T 12-10-2018 IPR003055 Nucleoside-specific channel-forming protein Tsx GO:0005337|GO:0009279 M634_21265 cf8b933100be6819d357d6f92c5b55da 771 SUPERFAMILY SSF48452 589 703 2.05E-20 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_21265 cf8b933100be6819d357d6f92c5b55da 771 SMART SM00028 655 688 190.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_21265 cf8b933100be6819d357d6f92c5b55da 771 SMART SM00028 587 620 2.2E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_21265 cf8b933100be6819d357d6f92c5b55da 771 SMART SM00028 621 654 5.1 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_21265 cf8b933100be6819d357d6f92c5b55da 771 Gene3D G3DSA:1.10.1130.10 153 354 5.2E-20 T 12-10-2018 M634_21265 cf8b933100be6819d357d6f92c5b55da 771 Pfam PF13435 Cytochrome c554 and c-prime 44 72 0.027 T 12-10-2018 IPR023155 Cytochrome c-552/4 M634_21265 cf8b933100be6819d357d6f92c5b55da 771 Pfam PF13435 Cytochrome c554 and c-prime 177 215 6.6E-4 T 12-10-2018 IPR023155 Cytochrome c-552/4 M634_21265 cf8b933100be6819d357d6f92c5b55da 771 SUPERFAMILY SSF48695 38 578 4.19E-75 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily M634_21265 cf8b933100be6819d357d6f92c5b55da 771 Gene3D G3DSA:1.25.40.10 583 758 4.0E-23 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_21265 cf8b933100be6819d357d6f92c5b55da 771 Pfam PF13414 TPR repeat 595 635 9.7E-8 T 12-10-2018 M634_21265 cf8b933100be6819d357d6f92c5b55da 771 Pfam PF13432 Tetratricopeptide repeat 659 712 0.005 T 12-10-2018 M634_24405 ab4a6540a5226f618f1d187691d62ebd 276 Gene3D G3DSA:3.40.50.620 1 276 4.3E-81 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M634_24405 ab4a6540a5226f618f1d187691d62ebd 276 SUPERFAMILY SSF52402 2 276 8.87E-81 T 12-10-2018 M634_24405 ab4a6540a5226f618f1d187691d62ebd 276 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 16 274 46.964 T 12-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 M634_24405 ab4a6540a5226f618f1d187691d62ebd 276 TIGRFAM TIGR00552 nadE: NAD+ synthetase 20 272 1.7E-65 T 12-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 M634_24405 ab4a6540a5226f618f1d187691d62ebd 276 Pfam PF02540 NAD synthase 21 270 6.6E-64 T 12-10-2018 IPR022310 NAD/GMP synthase M634_21515 a9f89c72d43bd1811d6c63cd06073744 248 SMART SM00052 4 231 9.8E-6 T 12-10-2018 IPR001633 EAL domain M634_21515 a9f89c72d43bd1811d6c63cd06073744 248 Pfam PF00563 EAL domain 24 184 1.8E-17 T 12-10-2018 IPR001633 EAL domain M634_21515 a9f89c72d43bd1811d6c63cd06073744 248 SUPERFAMILY SSF141868 21 232 4.84E-23 T 12-10-2018 IPR035919 EAL domain superfamily M634_21515 a9f89c72d43bd1811d6c63cd06073744 248 Gene3D G3DSA:3.20.20.450 15 234 6.9E-20 T 12-10-2018 IPR035919 EAL domain superfamily M634_24285 cfe2a77d08f3605ce9bed5f6bee02783 497 SUPERFAMILY SSF56219 76 366 4.84E-17 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily M634_24285 cfe2a77d08f3605ce9bed5f6bee02783 497 Gene3D G3DSA:3.60.10.10 90 365 6.7E-14 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily M634_24285 cfe2a77d08f3605ce9bed5f6bee02783 497 SMART SM00128 94 371 0.0075 T 12-10-2018 IPR000300 Inositol polyphosphate-related phosphatase GO:0046856 M634_14045 1a219fc9de3661e94a8fade5d68d9a7d 86 Pfam PF01197 Ribosomal protein L31 1 79 1.7E-27 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_14045 1a219fc9de3661e94a8fade5d68d9a7d 86 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_14045 1a219fc9de3661e94a8fade5d68d9a7d 86 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.0E-16 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_14045 1a219fc9de3661e94a8fade5d68d9a7d 86 PRINTS PR01249 Ribosomal protein L31 signature 45 60 1.0E-16 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_14045 1a219fc9de3661e94a8fade5d68d9a7d 86 PRINTS PR01249 Ribosomal protein L31 signature 60 78 1.0E-16 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_14045 1a219fc9de3661e94a8fade5d68d9a7d 86 SUPERFAMILY SSF143800 1 81 2.31E-23 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_14045 1a219fc9de3661e94a8fade5d68d9a7d 86 Gene3D G3DSA:2.30.170.50 1 84 1.7E-24 T 12-10-2018 M634_14045 1a219fc9de3661e94a8fade5d68d9a7d 86 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 81 29.769 T 12-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_14045 1a219fc9de3661e94a8fade5d68d9a7d 86 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 80 6.8E-19 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_08315 c0359434217556b67094ac454b13ed06 129 SUPERFAMILY SSF55200 41 129 1.44E-34 T 12-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 M634_08315 c0359434217556b67094ac454b13ed06 129 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 41 127 1.2E-37 T 12-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 M634_08315 c0359434217556b67094ac454b13ed06 129 ProSitePatterns PS00938 Initiation factor 3 signature. 16 29 - T 12-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 M634_08315 c0359434217556b67094ac454b13ed06 129 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 129 8.0E-59 T 12-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 M634_08315 c0359434217556b67094ac454b13ed06 129 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 34 4.5E-14 T 12-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 M634_08315 c0359434217556b67094ac454b13ed06 129 Gene3D G3DSA:3.10.20.80 1 33 1.4E-14 T 12-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 M634_08315 c0359434217556b67094ac454b13ed06 129 Gene3D G3DSA:3.30.110.10 34 129 1.3E-39 T 12-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 M634_08315 c0359434217556b67094ac454b13ed06 129 SUPERFAMILY SSF54364 1 36 1.57E-13 T 12-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 M634_00130 91c13c9d35166f288880bd9f769b5fb2 550 Gene3D G3DSA:3.40.50.10490 13 507 4.5E-242 T 12-10-2018 M634_00130 91c13c9d35166f288880bd9f769b5fb2 550 SUPERFAMILY SSF53697 6 548 2.72E-226 T 12-10-2018 M634_00130 91c13c9d35166f288880bd9f769b5fb2 550 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 498 515 - T 12-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_00130 91c13c9d35166f288880bd9f769b5fb2 550 Gene3D G3DSA:1.10.1390.10 508 550 9.2E-20 T 12-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_00130 91c13c9d35166f288880bd9f769b5fb2 550 Pfam PF00342 Phosphoglucose isomerase 53 542 3.0E-255 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_00130 91c13c9d35166f288880bd9f769b5fb2 550 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 266 279 - T 12-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_00130 91c13c9d35166f288880bd9f769b5fb2 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 151 170 2.2E-56 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_00130 91c13c9d35166f288880bd9f769b5fb2 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 262 280 2.2E-56 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_00130 91c13c9d35166f288880bd9f769b5fb2 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 498 511 2.2E-56 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_00130 91c13c9d35166f288880bd9f769b5fb2 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 466 484 2.2E-56 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_00130 91c13c9d35166f288880bd9f769b5fb2 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 484 498 2.2E-56 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_00130 91c13c9d35166f288880bd9f769b5fb2 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 339 360 2.2E-56 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_00130 91c13c9d35166f288880bd9f769b5fb2 550 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 47 525 43.181 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_00130 91c13c9d35166f288880bd9f769b5fb2 550 Gene3D G3DSA:3.40.50.10490 99 292 4.5E-242 T 12-10-2018 M634_21150 7ef61e9d22a72a5fb96e738f3bc6605b 226 Gene3D G3DSA:2.60.120.10 16 144 3.1E-16 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M634_21150 7ef61e9d22a72a5fb96e738f3bc6605b 226 Pfam PF00027 Cyclic nucleotide-binding domain 34 122 9.9E-13 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain M634_21150 7ef61e9d22a72a5fb96e738f3bc6605b 226 SUPERFAMILY SSF51206 19 143 9.3E-21 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like M634_10395 dd9d36fbcfcdfd42cb370518034628a4 185 SMART SM00530 9 64 5.0E-18 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 M634_10395 dd9d36fbcfcdfd42cb370518034628a4 185 Gene3D G3DSA:2.60.120.10 73 179 1.2E-15 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M634_10395 dd9d36fbcfcdfd42cb370518034628a4 185 SUPERFAMILY SSF51182 49 183 3.93E-24 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily M634_10395 dd9d36fbcfcdfd42cb370518034628a4 185 SUPERFAMILY SSF47413 2 70 1.31E-20 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M634_10395 dd9d36fbcfcdfd42cb370518034628a4 185 Pfam PF07883 Cupin domain 111 178 1.5E-16 T 12-10-2018 IPR013096 Cupin 2, conserved barrel M634_10395 dd9d36fbcfcdfd42cb370518034628a4 185 Gene3D G3DSA:1.10.260.40 1 66 4.3E-22 T 12-10-2018 M634_10395 dd9d36fbcfcdfd42cb370518034628a4 185 Pfam PF01381 Helix-turn-helix 12 64 1.0E-17 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 M634_09430 ad428c42d95b43fe646028da2ada762a 668 SUPERFAMILY SSF52096 166 531 2.65E-73 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily M634_09430 ad428c42d95b43fe646028da2ada762a 668 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 530 662 3.2E-39 T 12-10-2018 IPR020992 Tail specific protease, C-terminal M634_09430 ad428c42d95b43fe646028da2ada762a 668 Gene3D G3DSA:2.30.42.10 236 320 3.6E-11 T 12-10-2018 M634_09430 ad428c42d95b43fe646028da2ada762a 668 SMART SM00245 326 527 1.9E-61 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 M634_09430 ad428c42d95b43fe646028da2ada762a 668 Gene3D G3DSA:3.90.226.10 325 544 4.1E-57 T 12-10-2018 M634_09430 ad428c42d95b43fe646028da2ada762a 668 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 239 320 3.1E-12 T 12-10-2018 IPR001478 PDZ domain GO:0005515 M634_09430 ad428c42d95b43fe646028da2ada762a 668 SUPERFAMILY SSF50156 217 338 2.87E-14 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 M634_09430 ad428c42d95b43fe646028da2ada762a 668 Pfam PF03572 Peptidase family S41 356 525 2.9E-51 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 M634_09430 ad428c42d95b43fe646028da2ada762a 668 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 199 547 2.8E-112 T 12-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 M634_09430 ad428c42d95b43fe646028da2ada762a 668 SMART SM00228 246 323 4.9E-7 T 12-10-2018 IPR001478 PDZ domain GO:0005515 M634_09430 ad428c42d95b43fe646028da2ada762a 668 Pfam PF08180 B melanoma antigen family 9 36 6.0E-15 T 12-10-2018 IPR012530 B melanoma antigen-like M634_02670 0faac9abd49143049d651a6a5f3bad8c 500 SMART SM00382 253 376 5.4E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_02670 0faac9abd49143049d651a6a5f3bad8c 500 Gene3D G3DSA:3.30.450.90 88 225 1.1E-55 T 12-10-2018 M634_02670 0faac9abd49143049d651a6a5f3bad8c 500 Pfam PF00437 Type II/IV secretion system protein 127 392 2.5E-91 T 12-10-2018 IPR001482 Type II/IV secretion system protein M634_02670 0faac9abd49143049d651a6a5f3bad8c 500 Gene3D G3DSA:3.40.50.300 227 500 7.4E-126 T 12-10-2018 M634_02670 0faac9abd49143049d651a6a5f3bad8c 500 SUPERFAMILY SSF160246 12 78 2.88E-17 T 12-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily M634_02670 0faac9abd49143049d651a6a5f3bad8c 500 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 320 334 - T 12-10-2018 IPR001482 Type II/IV secretion system protein M634_02670 0faac9abd49143049d651a6a5f3bad8c 500 Gene3D G3DSA:3.30.300.160 1 78 1.4E-39 T 12-10-2018 M634_02670 0faac9abd49143049d651a6a5f3bad8c 500 SUPERFAMILY SSF52540 107 497 1.28E-105 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_02670 0faac9abd49143049d651a6a5f3bad8c 500 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 12 497 1.2E-226 T 12-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 M634_01280 f6067a6127dc815415899a54ef82f372 280 SUPERFAMILY SSF144091 96 271 4.45E-40 T 12-10-2018 M634_01280 f6067a6127dc815415899a54ef82f372 280 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 87 1.8E-34 T 12-10-2018 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 M634_01280 f6067a6127dc815415899a54ef82f372 280 Gene3D G3DSA:1.20.1540.10 90 279 7.6E-53 T 12-10-2018 IPR035952 Rhomboid-like superfamily M634_01280 f6067a6127dc815415899a54ef82f372 280 Pfam PF01694 Rhomboid family 134 271 5.1E-31 T 12-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 M634_01280 f6067a6127dc815415899a54ef82f372 280 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 3 271 2.1E-116 T 12-10-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 M634_01280 f6067a6127dc815415899a54ef82f372 280 Gene3D G3DSA:3.30.70.2350 1 69 2.9E-25 T 12-10-2018 IPR038236 GlpG peptidase, N-terminal domain superfamily M634_15760 59d7b9f21bc93df80b6b9c5185e389ab 502 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 497 40.914 T 12-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 M634_15760 59d7b9f21bc93df80b6b9c5185e389ab 502 SUPERFAMILY SSF52949 1 184 6.47E-52 T 12-10-2018 M634_15760 59d7b9f21bc93df80b6b9c5185e389ab 502 SUPERFAMILY SSF53187 179 496 5.34E-125 T 12-10-2018 M634_15760 59d7b9f21bc93df80b6b9c5185e389ab 502 Gene3D G3DSA:3.40.630.10 181 497 2.2E-141 T 12-10-2018 M634_15760 59d7b9f21bc93df80b6b9c5185e389ab 502 Gene3D G3DSA:3.40.220.10 1 159 3.1E-59 T 12-10-2018 M634_15760 59d7b9f21bc93df80b6b9c5185e389ab 502 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 187 489 1.2E-123 T 12-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 M634_15760 59d7b9f21bc93df80b6b9c5185e389ab 502 PRINTS PR00481 Cytosol aminopeptidase signature 345 365 4.8E-55 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 M634_15760 59d7b9f21bc93df80b6b9c5185e389ab 502 PRINTS PR00481 Cytosol aminopeptidase signature 286 307 4.8E-55 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 M634_15760 59d7b9f21bc93df80b6b9c5185e389ab 502 PRINTS PR00481 Cytosol aminopeptidase signature 323 344 4.8E-55 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 M634_15760 59d7b9f21bc93df80b6b9c5185e389ab 502 PRINTS PR00481 Cytosol aminopeptidase signature 264 281 4.8E-55 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 M634_15760 59d7b9f21bc93df80b6b9c5185e389ab 502 PRINTS PR00481 Cytosol aminopeptidase signature 373 388 4.8E-55 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 M634_15760 59d7b9f21bc93df80b6b9c5185e389ab 502 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 349 356 - T 12-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 M634_15760 59d7b9f21bc93df80b6b9c5185e389ab 502 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 9.7E-34 T 12-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 M634_00690 20d034d980bc364432b6b783b433699b 381 Pfam PF01551 Peptidase family M23 282 375 1.2E-24 T 12-10-2018 IPR016047 Peptidase M23 M634_00690 20d034d980bc364432b6b783b433699b 381 Gene3D G3DSA:2.70.70.10 242 381 2.5E-34 T 12-10-2018 IPR011055 Duplicated hybrid motif M634_00690 20d034d980bc364432b6b783b433699b 381 SUPERFAMILY SSF51261 148 379 7.32E-49 T 12-10-2018 IPR011055 Duplicated hybrid motif M634_02945 26dfc442120fa654c24a433020cc2ab8 78 SUPERFAMILY SSF143800 2 76 7.85E-30 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_02945 26dfc442120fa654c24a433020cc2ab8 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.212 T 12-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_02945 26dfc442120fa654c24a433020cc2ab8 78 Gene3D G3DSA:2.30.170.40 2 78 1.4E-32 T 12-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_02945 26dfc442120fa654c24a433020cc2ab8 78 Pfam PF00830 Ribosomal L28 family 3 62 5.0E-26 T 12-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_02945 26dfc442120fa654c24a433020cc2ab8 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 6.8E-27 T 12-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_22535 4b1c45d9182bd54df773f87257e161fb 293 Pfam PF11060 Protein of unknown function (DUF2861) 22 288 3.9E-94 T 12-10-2018 IPR021290 Protein of unknown function DUF2861 M634_00910 317e6481b55b0cbb0b9298e1deeafe88 152 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 81 94 5.3E-19 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 M634_00910 317e6481b55b0cbb0b9298e1deeafe88 152 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 98 112 5.3E-19 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 M634_00910 317e6481b55b0cbb0b9298e1deeafe88 152 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 113 126 5.3E-19 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 M634_00910 317e6481b55b0cbb0b9298e1deeafe88 152 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 152 2.0E-62 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 M634_00910 317e6481b55b0cbb0b9298e1deeafe88 152 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 108 125 - T 12-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 M634_00910 317e6481b55b0cbb0b9298e1deeafe88 152 Gene3D G3DSA:2.40.50.100 74 152 2.3E-32 T 12-10-2018 M634_00910 317e6481b55b0cbb0b9298e1deeafe88 152 SUPERFAMILY SSF51230 77 152 6.81E-27 T 12-10-2018 IPR011053 Single hybrid motif M634_00910 317e6481b55b0cbb0b9298e1deeafe88 152 Pfam PF00364 Biotin-requiring enzyme 77 151 4.3E-26 T 12-10-2018 IPR000089 Biotin/lipoyl attachment M634_14925 0930ba5319f825f7383b74caa368b25b 309 PIRSF PIRSF026649 5 306 2.3E-72 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 M634_14925 0930ba5319f825f7383b74caa368b25b 309 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 7 308 6.1E-135 T 12-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 M634_14925 0930ba5319f825f7383b74caa368b25b 309 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 9 299 2.6E-69 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 M634_14925 0930ba5319f825f7383b74caa368b25b 309 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 6 308 43.342 T 12-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 M634_10190 4f1646677b1d0dfe98b9c6bc39ec3640 401 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 8 377 6.2E-110 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 M634_10190 4f1646677b1d0dfe98b9c6bc39ec3640 401 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 18 34 - T 12-10-2018 IPR013061 Tryptophan/tryrosine permease, conserved site M634_10190 4f1646677b1d0dfe98b9c6bc39ec3640 401 Pfam PF03222 Tryptophan/tyrosine permease family 4 383 6.7E-109 T 12-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 M634_10190 4f1646677b1d0dfe98b9c6bc39ec3640 401 Gene3D G3DSA:1.20.1740.10 3 399 7.9E-12 T 12-10-2018 M634_10190 4f1646677b1d0dfe98b9c6bc39ec3640 401 PIRSF PIRSF006060 3 292 2.1E-10 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 M634_10190 4f1646677b1d0dfe98b9c6bc39ec3640 401 PIRSF PIRSF006060 298 400 2.6 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 M634_10190 4f1646677b1d0dfe98b9c6bc39ec3640 401 PRINTS PR00166 Aromatic amino acid permease signature 222 241 1.3E-79 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 M634_10190 4f1646677b1d0dfe98b9c6bc39ec3640 401 PRINTS PR00166 Aromatic amino acid permease signature 149 169 1.3E-79 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 M634_10190 4f1646677b1d0dfe98b9c6bc39ec3640 401 PRINTS PR00166 Aromatic amino acid permease signature 334 353 1.3E-79 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 M634_10190 4f1646677b1d0dfe98b9c6bc39ec3640 401 PRINTS PR00166 Aromatic amino acid permease signature 183 205 1.3E-79 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 M634_10190 4f1646677b1d0dfe98b9c6bc39ec3640 401 PRINTS PR00166 Aromatic amino acid permease signature 38 57 1.3E-79 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 M634_10190 4f1646677b1d0dfe98b9c6bc39ec3640 401 PRINTS PR00166 Aromatic amino acid permease signature 11 34 1.3E-79 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 M634_10190 4f1646677b1d0dfe98b9c6bc39ec3640 401 PRINTS PR00166 Aromatic amino acid permease signature 279 298 1.3E-79 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 M634_10190 4f1646677b1d0dfe98b9c6bc39ec3640 401 PRINTS PR00166 Aromatic amino acid permease signature 83 103 1.3E-79 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 M634_10190 4f1646677b1d0dfe98b9c6bc39ec3640 401 PRINTS PR00166 Aromatic amino acid permease signature 313 331 1.3E-79 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 M634_10040 b47c73f524a387e08a9787a0f9f35f9b 129 Gene3D G3DSA:3.40.50.300 3 129 4.5E-29 T 12-10-2018 M634_10040 b47c73f524a387e08a9787a0f9f35f9b 129 Pfam PF13671 AAA domain 6 106 1.1E-14 T 12-10-2018 M634_10040 b47c73f524a387e08a9787a0f9f35f9b 129 SUPERFAMILY SSF52540 4 105 8.8E-16 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_19840 3bca24d54616df3600450e8b976722fd 505 SMART SM00155 399 426 2.2E-5 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 M634_19840 3bca24d54616df3600450e8b976722fd 505 SMART SM00155 165 192 0.027 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 M634_19840 3bca24d54616df3600450e8b976722fd 505 Pfam PF13091 PLD-like domain 78 224 9.7E-17 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 M634_19840 3bca24d54616df3600450e8b976722fd 505 Pfam PF13091 PLD-like domain 310 447 5.3E-25 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 M634_19840 3bca24d54616df3600450e8b976722fd 505 Gene3D G3DSA:3.30.870.10 288 469 1.1E-41 T 12-10-2018 M634_19840 3bca24d54616df3600450e8b976722fd 505 SUPERFAMILY SSF56024 37 236 9.2E-39 T 12-10-2018 M634_19840 3bca24d54616df3600450e8b976722fd 505 SUPERFAMILY SSF56024 278 460 8.64E-37 T 12-10-2018 M634_19840 3bca24d54616df3600450e8b976722fd 505 Gene3D G3DSA:3.30.870.10 56 256 2.6E-36 T 12-10-2018 M634_21530 88293779181c16cc11d42a5b9373a2a9 326 Pfam PF01965 DJ-1/PfpI family 25 182 8.1E-10 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 M634_21530 88293779181c16cc11d42a5b9373a2a9 326 SUPERFAMILY SSF52317 23 190 3.29E-24 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M634_21530 88293779181c16cc11d42a5b9373a2a9 326 SUPERFAMILY SSF46689 273 322 8.06E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_21530 88293779181c16cc11d42a5b9373a2a9 326 SMART SM00342 236 319 5.9E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_21530 88293779181c16cc11d42a5b9373a2a9 326 Gene3D G3DSA:1.10.10.60 221 325 8.4E-23 T 12-10-2018 M634_21530 88293779181c16cc11d42a5b9373a2a9 326 Pfam PF12833 Helix-turn-helix domain 242 321 5.4E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_21530 88293779181c16cc11d42a5b9373a2a9 326 SUPERFAMILY SSF46689 219 270 9.86E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_21530 88293779181c16cc11d42a5b9373a2a9 326 Gene3D G3DSA:3.40.50.880 2 209 3.4E-43 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M634_21530 88293779181c16cc11d42a5b9373a2a9 326 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 273 315 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 M634_23395 323f3f5ccbded90d13db89ef48c0d9c1 103 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 7 101 2.0E-36 T 12-10-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 M634_23395 323f3f5ccbded90d13db89ef48c0d9c1 103 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 13 87 2.9E-16 T 12-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 M634_16025 7393be43430c412af3aec92384dc3399 162 SUPERFAMILY SSF54523 7 51 1.96E-12 T 12-10-2018 M634_16025 7393be43430c412af3aec92384dc3399 162 Gene3D G3DSA:3.30.700.10 7 162 5.4E-14 T 12-10-2018 M634_16025 7393be43430c412af3aec92384dc3399 162 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 7.8E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M634_16025 7393be43430c412af3aec92384dc3399 162 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M634_16025 7393be43430c412af3aec92384dc3399 162 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 2.2E-9 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M634_01105 af7841816b85fbe93c955c9bc0544a50 233 Gene3D G3DSA:3.30.190.20 21 225 2.2E-80 T 12-10-2018 M634_01105 af7841816b85fbe93c955c9bc0544a50 233 Pfam PF00687 Ribosomal protein L1p/L10e family 31 219 1.4E-52 T 12-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein M634_01105 af7841816b85fbe93c955c9bc0544a50 233 SUPERFAMILY SSF56808 6 225 1.96E-82 T 12-10-2018 IPR023674 Ribosomal protein L1-like M634_01105 af7841816b85fbe93c955c9bc0544a50 233 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 12-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_01105 af7841816b85fbe93c955c9bc0544a50 233 PIRSF PIRSF002155 1 227 6.0E-79 T 12-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_01105 af7841816b85fbe93c955c9bc0544a50 233 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 4.1E-106 T 12-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 M634_01105 af7841816b85fbe93c955c9bc0544a50 233 Gene3D G3DSA:3.40.50.790 68 159 2.2E-80 T 12-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich M634_01105 af7841816b85fbe93c955c9bc0544a50 233 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.018 T 12-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 M634_09350 82f2bd4c3b74be49e813fa18762fc309 249 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_09350 82f2bd4c3b74be49e813fa18762fc309 249 Pfam PF00005 ABC transporter 24 172 9.3E-39 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_09350 82f2bd4c3b74be49e813fa18762fc309 249 PIRSF PIRSF039085 5 248 9.8E-111 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 M634_09350 82f2bd4c3b74be49e813fa18762fc309 249 SMART SM00382 33 220 1.3E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_09350 82f2bd4c3b74be49e813fa18762fc309 249 SUPERFAMILY SSF52540 8 242 5.83E-82 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_09350 82f2bd4c3b74be49e813fa18762fc309 249 Gene3D G3DSA:3.40.50.300 6 249 1.5E-79 T 12-10-2018 M634_10640 c1c672eeced3db528deba3b772c8ac0c 103 SUPERFAMILY SSF54909 1 69 1.01E-6 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel M634_22700 2ac44db3b09eb4acd8ff247b22d5ca9d 294 Gene3D G3DSA:3.40.190.290 91 292 9.0E-30 T 12-10-2018 M634_22700 2ac44db3b09eb4acd8ff247b22d5ca9d 294 SUPERFAMILY SSF46785 1 87 6.74E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_22700 2ac44db3b09eb4acd8ff247b22d5ca9d 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.7E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_22700 2ac44db3b09eb4acd8ff247b22d5ca9d 294 SUPERFAMILY SSF53850 88 292 3.62E-28 T 12-10-2018 M634_22700 2ac44db3b09eb4acd8ff247b22d5ca9d 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.8E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_22700 2ac44db3b09eb4acd8ff247b22d5ca9d 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.8E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_22700 2ac44db3b09eb4acd8ff247b22d5ca9d 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.8E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_22700 2ac44db3b09eb4acd8ff247b22d5ca9d 294 Pfam PF03466 LysR substrate binding domain 87 282 1.2E-24 T 12-10-2018 IPR005119 LysR, substrate-binding M634_22700 2ac44db3b09eb4acd8ff247b22d5ca9d 294 Gene3D G3DSA:1.10.10.10 1 84 3.7E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_04820 ad20daf92603b9769e14f1f9b58621c1 436 PIRSF PIRSF001362 1 436 2.3E-224 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 M634_04820 ad20daf92603b9769e14f1f9b58621c1 436 Gene3D G3DSA:3.20.20.60 1 419 1.1E-182 T 12-10-2018 M634_04820 ad20daf92603b9769e14f1f9b58621c1 436 Pfam PF00463 Isocitrate lyase family 14 257 5.9E-62 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 M634_04820 ad20daf92603b9769e14f1f9b58621c1 436 Pfam PF00463 Isocitrate lyase family 258 436 9.1E-53 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 M634_04820 ad20daf92603b9769e14f1f9b58621c1 436 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 258 436 2.9E-90 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 M634_04820 ad20daf92603b9769e14f1f9b58621c1 436 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 10 257 1.3E-113 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 M634_04820 ad20daf92603b9769e14f1f9b58621c1 436 ProSitePatterns PS00161 Isocitrate lyase signature. 195 200 - T 12-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 M634_04820 ad20daf92603b9769e14f1f9b58621c1 436 SUPERFAMILY SSF51621 6 436 4.93E-153 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 M634_14000 063a4f7421bfb33a532cc989b6a25d16 127 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 126 1.0E-67 T 12-10-2018 IPR020911 Uncharacterised protein family UPF0325 M634_14000 063a4f7421bfb33a532cc989b6a25d16 127 Pfam PF11944 Protein of unknown function (DUF3461) 1 126 6.0E-56 T 12-10-2018 IPR020911 Uncharacterised protein family UPF0325 M634_14000 063a4f7421bfb33a532cc989b6a25d16 127 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 127 31.323 T 12-10-2018 IPR020911 Uncharacterised protein family UPF0325 M634_13740 6c57328b2f7ec621aafba6733169d766 378 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 99 137 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 M634_13740 6c57328b2f7ec621aafba6733169d766 378 SUPERFAMILY SSF55031 181 291 2.69E-28 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain M634_13740 6c57328b2f7ec621aafba6733169d766 378 Gene3D G3DSA:3.30.70.360 181 294 5.1E-129 T 12-10-2018 M634_13740 6c57328b2f7ec621aafba6733169d766 378 Pfam PF01546 Peptidase family M20/M25/M40 64 373 2.3E-46 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 M634_13740 6c57328b2f7ec621aafba6733169d766 378 Pfam PF07687 Peptidase dimerisation domain 177 284 3.9E-22 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain M634_13740 6c57328b2f7ec621aafba6733169d766 378 Gene3D G3DSA:3.40.630.10 9 364 5.1E-129 T 12-10-2018 M634_13740 6c57328b2f7ec621aafba6733169d766 378 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 377 52.22 T 12-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 M634_13740 6c57328b2f7ec621aafba6733169d766 378 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 7 375 5.8E-179 T 12-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 M634_13740 6c57328b2f7ec621aafba6733169d766 378 SUPERFAMILY SSF53187 6 376 5.74E-68 T 12-10-2018 M634_02365 b4fabd49c705b1fb0d3b73a786cb2cab 259 SUPERFAMILY SSF53335 4 255 1.62E-75 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_02365 b4fabd49c705b1fb0d3b73a786cb2cab 259 Gene3D G3DSA:3.40.1630.10 1 56 8.8E-21 T 12-10-2018 M634_02365 b4fabd49c705b1fb0d3b73a786cb2cab 259 Pfam PF04445 Putative SAM-dependent methyltransferase 19 255 8.8E-107 T 12-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 M634_02365 b4fabd49c705b1fb0d3b73a786cb2cab 259 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 256 38.936 T 12-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 M634_02365 b4fabd49c705b1fb0d3b73a786cb2cab 259 Gene3D G3DSA:3.40.50.150 57 259 3.7E-75 T 12-10-2018 M634_10050 a781dfc8f3ddee49fad713756606df5c 526 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 33 520 2.0E-169 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 M634_10050 a781dfc8f3ddee49fad713756606df5c 526 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 74 521 1.1E-134 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 M634_10050 a781dfc8f3ddee49fad713756606df5c 526 ProSitePatterns PS01303 BCCT family of transporters signature. 336 345 - T 12-10-2018 IPR018093 BCCT transporter, conserved site M634_13580 25104c3e138f429defc630319c24c804 376 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 353 1.0E-134 T 12-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 M634_13580 25104c3e138f429defc630319c24c804 376 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 7.7E-122 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 M634_13580 25104c3e138f429defc630319c24c804 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 3.6E-40 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 M634_13580 25104c3e138f429defc630319c24c804 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 3.6E-40 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 M634_13580 25104c3e138f429defc630319c24c804 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 3.6E-40 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 M634_13580 25104c3e138f429defc630319c24c804 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 3.6E-40 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 M634_13580 25104c3e138f429defc630319c24c804 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 3.6E-40 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 M634_13580 25104c3e138f429defc630319c24c804 376 SUPERFAMILY SSF160544 250 355 6.54E-40 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal M634_13580 25104c3e138f429defc630319c24c804 376 Gene3D G3DSA:3.40.1690.10 218 359 2.5E-57 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal M634_11850 add951298493e9b0c7185116dae4c5e2 200 Gene3D G3DSA:3.90.10.10 141 198 6.3E-6 T 12-10-2018 M634_11850 add951298493e9b0c7185116dae4c5e2 200 TIGRFAM TIGR03146 cyt_nit_nrfB: cytochrome c nitrite reductase, pentaheme subunit 42 188 4.8E-63 T 12-10-2018 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit GO:0006807|GO:0020037|GO:0042597 M634_11850 add951298493e9b0c7185116dae4c5e2 200 SUPERFAMILY SSF48695 5 190 2.62E-26 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily M634_11850 add951298493e9b0c7185116dae4c5e2 200 Pfam PF13435 Cytochrome c554 and c-prime 84 160 2.5E-4 T 12-10-2018 IPR023155 Cytochrome c-552/4 M634_11850 add951298493e9b0c7185116dae4c5e2 200 Gene3D G3DSA:3.90.10.10 32 140 5.5E-7 T 12-10-2018 M634_01110 01b3498404570ece5f10b2e26c0999d1 142 SUPERFAMILY SSF54747 3 73 1.06E-29 T 12-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily M634_01110 01b3498404570ece5f10b2e26c0999d1 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 71 9.0E-15 T 12-10-2018 M634_01110 01b3498404570ece5f10b2e26c0999d1 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 2.4E-64 T 12-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_01110 01b3498404570ece5f10b2e26c0999d1 142 SMART SM00649 9 141 2.1E-81 T 12-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 M634_01110 01b3498404570ece5f10b2e26c0999d1 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 12-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_01110 01b3498404570ece5f10b2e26c0999d1 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 3.6E-29 T 12-10-2018 IPR020784 Ribosomal protein L11, N-terminal M634_01110 01b3498404570ece5f10b2e26c0999d1 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 1.5E-23 T 12-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 M634_01110 01b3498404570ece5f10b2e26c0999d1 142 Gene3D G3DSA:3.30.1550.10 2 72 2.4E-34 T 12-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily M634_01110 01b3498404570ece5f10b2e26c0999d1 142 Gene3D G3DSA:1.10.10.250 73 141 1.1E-25 T 12-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily M634_01110 01b3498404570ece5f10b2e26c0999d1 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.525 T 12-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 M634_01110 01b3498404570ece5f10b2e26c0999d1 142 SUPERFAMILY SSF46906 68 141 2.88E-25 T 12-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily M634_07960 8e91f19300d99c1cea561bc874763214 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 426 3.7E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_07960 8e91f19300d99c1cea561bc874763214 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 391 3.7E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_07960 8e91f19300d99c1cea561bc874763214 449 SUPERFAMILY SSF55874 308 444 6.81E-24 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_07960 8e91f19300d99c1cea561bc874763214 449 SUPERFAMILY SSF47384 224 289 1.14E-5 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M634_07960 8e91f19300d99c1cea561bc874763214 449 SMART SM00387 342 448 1.8E-14 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_07960 8e91f19300d99c1cea561bc874763214 449 Gene3D G3DSA:3.30.565.10 309 448 2.1E-24 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_07960 8e91f19300d99c1cea561bc874763214 449 Gene3D G3DSA:1.10.287.130 190 292 4.1E-8 T 12-10-2018 M634_07960 8e91f19300d99c1cea561bc874763214 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 345 445 1.9E-9 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_08050 474c6559275e3cbc79cfda229e702876 383 Pfam PF06965 Na+/H+ antiporter 1 7 373 3.7E-145 T 12-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 M634_08050 474c6559275e3cbc79cfda229e702876 383 Gene3D G3DSA:1.20.1530.10 3 381 1.8E-148 T 12-10-2018 IPR023171 Na/H antiporter domain superfamily M634_08050 474c6559275e3cbc79cfda229e702876 383 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 373 1.3E-194 T 12-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 M634_08050 474c6559275e3cbc79cfda229e702876 383 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 380 23.634 T 12-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 M634_02770 bf80c1b9c8df171bf3f592e22978dcbf 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 3.8E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_02770 bf80c1b9c8df171bf3f592e22978dcbf 239 SUPERFAMILY SSF52172 3 126 5.41E-42 T 12-10-2018 IPR011006 CheY-like superfamily M634_02770 bf80c1b9c8df171bf3f592e22978dcbf 239 Gene3D G3DSA:3.40.50.2300 1 125 4.1E-40 T 12-10-2018 M634_02770 bf80c1b9c8df171bf3f592e22978dcbf 239 SUPERFAMILY SSF46894 132 234 2.44E-26 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M634_02770 bf80c1b9c8df171bf3f592e22978dcbf 239 SMART SM00448 5 116 3.8E-45 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_02770 bf80c1b9c8df171bf3f592e22978dcbf 239 Gene3D G3DSA:1.10.10.10 130 239 2.5E-38 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_02770 bf80c1b9c8df171bf3f592e22978dcbf 239 SMART SM00862 156 232 1.8E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_02770 bf80c1b9c8df171bf3f592e22978dcbf 239 Pfam PF00072 Response regulator receiver domain 7 117 2.1E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_12615 7a6bfeda1c60c04e2693fc38919ea0e4 714 Gene3D G3DSA:3.40.1390.20 225 365 1.1E-12 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily M634_12615 7a6bfeda1c60c04e2693fc38919ea0e4 714 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 406 706 5.2E-132 T 12-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 M634_12615 7a6bfeda1c60c04e2693fc38919ea0e4 714 SUPERFAMILY SSF52540 1 240 1.59E-28 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_12615 7a6bfeda1c60c04e2693fc38919ea0e4 714 Pfam PF07085 DRTGG domain 233 344 7.6E-27 T 12-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 M634_12615 7a6bfeda1c60c04e2693fc38919ea0e4 714 SUPERFAMILY SSF75138 229 353 1.18E-23 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily M634_12615 7a6bfeda1c60c04e2693fc38919ea0e4 714 Pfam PF13500 AAA domain 3 229 6.4E-51 T 12-10-2018 M634_12615 7a6bfeda1c60c04e2693fc38919ea0e4 714 Gene3D G3DSA:3.40.50.300 5 217 9.5E-14 T 12-10-2018 M634_12615 7a6bfeda1c60c04e2693fc38919ea0e4 714 PIRSF PIRSF006107 1 714 0.0 T 12-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 M634_12615 7a6bfeda1c60c04e2693fc38919ea0e4 714 Gene3D G3DSA:3.40.50.10950 398 709 6.1E-134 T 12-10-2018 M634_12615 7a6bfeda1c60c04e2693fc38919ea0e4 714 SUPERFAMILY SSF53659 392 709 2.22E-96 T 12-10-2018 M634_12615 7a6bfeda1c60c04e2693fc38919ea0e4 714 Pfam PF01515 Phosphate acetyl/butaryl transferase 391 706 1.4E-125 T 12-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 M634_12615 7a6bfeda1c60c04e2693fc38919ea0e4 714 Gene3D G3DSA:3.40.50.10750 529 682 6.1E-134 T 12-10-2018 M634_21010 b416531aa976dcee8d3605f791a4678d 142 SUPERFAMILY SSF46458 4 131 2.09E-26 T 12-10-2018 IPR009050 Globin-like superfamily M634_21010 b416531aa976dcee8d3605f791a4678d 142 Gene3D G3DSA:1.10.490.10 1 132 8.9E-30 T 12-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 M634_19345 f6b35ea237eaad8417fc388244d9db53 459 PIRSF PIRSF000521 212 452 3.8E-19 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M634_19345 f6b35ea237eaad8417fc388244d9db53 459 PIRSF PIRSF000521 5 176 3.8E-6 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M634_19345 f6b35ea237eaad8417fc388244d9db53 459 SUPERFAMILY SSF53383 57 450 6.75E-105 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_19345 f6b35ea237eaad8417fc388244d9db53 459 Pfam PF00202 Aminotransferase class-III 57 449 1.9E-84 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M634_19345 f6b35ea237eaad8417fc388244d9db53 459 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 265 302 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 M634_19345 f6b35ea237eaad8417fc388244d9db53 459 Gene3D G3DSA:3.40.640.10 89 348 2.8E-117 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_19345 f6b35ea237eaad8417fc388244d9db53 459 Gene3D G3DSA:3.90.1150.10 61 444 2.8E-117 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M634_00925 80bd176549c707e8254136760eec7dd2 331 PIRSF PIRSF006621 9 330 1.3E-101 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 M634_00925 80bd176549c707e8254136760eec7dd2 331 Gene3D G3DSA:1.10.1200.80 260 331 1.1E-7 T 12-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 M634_00925 80bd176549c707e8254136760eec7dd2 331 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 10 330 49.928 T 12-10-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 M634_00925 80bd176549c707e8254136760eec7dd2 331 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 103 121 - T 12-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 M634_00925 80bd176549c707e8254136760eec7dd2 331 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 12 329 1.2E-132 T 12-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 M634_00925 80bd176549c707e8254136760eec7dd2 331 Pfam PF01207 Dihydrouridine synthase (Dus) 22 315 6.8E-109 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 M634_00925 80bd176549c707e8254136760eec7dd2 331 Gene3D G3DSA:3.20.20.70 15 258 3.6E-78 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_00925 80bd176549c707e8254136760eec7dd2 331 SUPERFAMILY SSF51395 19 328 7.69E-90 T 12-10-2018 M634_05745 3d563b8f5dae794025d1e6989cfc2357 283 Pfam PF00793 DAHP synthetase I family 10 275 1.0E-69 T 12-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 M634_05745 3d563b8f5dae794025d1e6989cfc2357 283 SUPERFAMILY SSF51569 2 278 3.57E-104 T 12-10-2018 M634_05745 3d563b8f5dae794025d1e6989cfc2357 283 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 6.2E-116 T 12-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 M634_05745 3d563b8f5dae794025d1e6989cfc2357 283 Gene3D G3DSA:3.20.20.70 1 283 1.5E-101 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_05745 3d563b8f5dae794025d1e6989cfc2357 283 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 48.166 T 12-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 M634_02355 7021a1536f1878f2818cad533f217940 154 SMART SM00344 8 115 5.0E-40 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 M634_02355 7021a1536f1878f2818cad533f217940 154 Pfam PF01037 Lrp/AsnC ligand binding domain 75 145 1.4E-16 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain M634_02355 7021a1536f1878f2818cad533f217940 154 Gene3D G3DSA:1.10.10.10 6 59 2.6E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_02355 7021a1536f1878f2818cad533f217940 154 SUPERFAMILY SSF54909 69 154 4.42E-19 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel M634_02355 7021a1536f1878f2818cad533f217940 154 SUPERFAMILY SSF46785 7 68 2.03E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_02355 7021a1536f1878f2818cad533f217940 154 Gene3D G3DSA:3.30.70.920 60 142 1.9E-31 T 12-10-2018 M634_02355 7021a1536f1878f2818cad533f217940 154 Pfam PF13404 AsnC-type helix-turn-helix domain 8 49 6.0E-14 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M634_02355 7021a1536f1878f2818cad533f217940 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 1.3E-9 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M634_02355 7021a1536f1878f2818cad533f217940 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 1.3E-9 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M634_02355 7021a1536f1878f2818cad533f217940 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 1.3E-9 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M634_05500 66e1d0bf8c501313dd8b653cc1aa075d 92 Pfam PF04359 Protein of unknown function (DUF493) 12 92 1.9E-29 T 12-10-2018 IPR007454 Uncharacterised protein family UPF0250 M634_05500 66e1d0bf8c501313dd8b653cc1aa075d 92 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 6 92 26.375 T 12-10-2018 IPR007454 Uncharacterised protein family UPF0250 M634_05500 66e1d0bf8c501313dd8b653cc1aa075d 92 SUPERFAMILY SSF117991 7 92 3.66E-31 T 12-10-2018 IPR027471 YbeD-like domain superfamily M634_05500 66e1d0bf8c501313dd8b653cc1aa075d 92 Gene3D G3DSA:3.30.70.260 6 92 2.8E-33 T 12-10-2018 M634_23650 23d589a681cc641de5551f828278ca2c 112 Gene3D G3DSA:3.30.1360.20 15 112 6.1E-33 T 12-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 M634_23650 23d589a681cc641de5551f828278ca2c 112 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 16 107 5.0E-32 T 12-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 M634_23650 23d589a681cc641de5551f828278ca2c 112 SUPERFAMILY SSF55248 16 109 5.76E-34 T 12-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 M634_23650 23d589a681cc641de5551f828278ca2c 112 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 14 109 22.02 T 12-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 M634_17540 acae95190288f97208184d86fed73319 686 Gene3D G3DSA:3.20.20.80 430 653 2.1E-37 T 12-10-2018 M634_17540 acae95190288f97208184d86fed73319 686 Gene3D G3DSA:3.20.20.80 186 427 6.5E-56 T 12-10-2018 M634_17540 acae95190288f97208184d86fed73319 686 SUPERFAMILY SSF51445 189 655 5.28E-92 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M634_17540 acae95190288f97208184d86fed73319 686 PIRSF PIRSF036917 1 685 0.0 T 12-10-2018 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 M634_17540 acae95190288f97208184d86fed73319 686 SMART SM00642 203 646 2.3E-92 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 M634_17540 acae95190288f97208184d86fed73319 686 Pfam PF00128 Alpha amylase, catalytic domain 236 606 8.8E-52 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 M634_13540 11e4f9a6d0316f8a7c13d47025a1b72f 369 Pfam PF01339 CheB methylesterase 184 361 3.4E-58 T 12-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 M634_13540 11e4f9a6d0316f8a7c13d47025a1b72f 369 Gene3D G3DSA:3.40.50.180 176 365 2.2E-64 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal M634_13540 11e4f9a6d0316f8a7c13d47025a1b72f 369 PIRSF PIRSF000876 1 367 2.7E-127 T 12-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 M634_13540 11e4f9a6d0316f8a7c13d47025a1b72f 369 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 367 38.772 T 12-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 M634_13540 11e4f9a6d0316f8a7c13d47025a1b72f 369 Gene3D G3DSA:3.40.50.2300 2 130 1.7E-31 T 12-10-2018 M634_13540 11e4f9a6d0316f8a7c13d47025a1b72f 369 SUPERFAMILY SSF52172 2 109 7.83E-27 T 12-10-2018 IPR011006 CheY-like superfamily M634_13540 11e4f9a6d0316f8a7c13d47025a1b72f 369 SMART SM00448 3 126 1.2E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_13540 11e4f9a6d0316f8a7c13d47025a1b72f 369 Pfam PF00072 Response regulator receiver domain 5 109 1.9E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_13540 11e4f9a6d0316f8a7c13d47025a1b72f 369 SUPERFAMILY SSF52738 178 363 1.7E-62 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal M634_12125 56b9dda81d95a49755e063cab8314e42 225 SUPERFAMILY SSF46894 123 222 9.07E-21 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M634_12125 56b9dda81d95a49755e063cab8314e42 225 Pfam PF00072 Response regulator receiver domain 4 112 1.4E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_12125 56b9dda81d95a49755e063cab8314e42 225 Gene3D G3DSA:1.10.10.10 122 223 1.4E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_12125 56b9dda81d95a49755e063cab8314e42 225 SUPERFAMILY SSF52172 1 125 7.26E-39 T 12-10-2018 IPR011006 CheY-like superfamily M634_12125 56b9dda81d95a49755e063cab8314e42 225 SMART SM00862 147 221 3.2E-14 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_12125 56b9dda81d95a49755e063cab8314e42 225 SMART SM00448 2 113 4.8E-36 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_12125 56b9dda81d95a49755e063cab8314e42 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 221 3.0E-16 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_12125 56b9dda81d95a49755e063cab8314e42 225 Gene3D G3DSA:3.40.50.2300 1 121 4.8E-34 T 12-10-2018 M634_13635 211598dcd749137bf2c7dd9ecd5f0d7d 266 PRINTS PR01003 Flagellar assembly protein FliH signature 217 233 6.7E-5 T 12-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 M634_13635 211598dcd749137bf2c7dd9ecd5f0d7d 266 PRINTS PR01003 Flagellar assembly protein FliH signature 81 103 6.7E-5 T 12-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 M634_13635 211598dcd749137bf2c7dd9ecd5f0d7d 266 PRINTS PR01003 Flagellar assembly protein FliH signature 104 122 6.7E-5 T 12-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 M634_13635 211598dcd749137bf2c7dd9ecd5f0d7d 266 Pfam PF02108 Flagellar assembly protein FliH 125 251 5.7E-36 T 12-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE M634_09650 ced91a9cce78a2279a89ea03f2caffe4 397 SMART SM00382 62 245 4.5E-20 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_09650 ced91a9cce78a2279a89ea03f2caffe4 397 Pfam PF00005 ABC transporter 55 194 1.7E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_09650 ced91a9cce78a2279a89ea03f2caffe4 397 Pfam PF08402 TOBE domain 312 391 2.9E-12 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 M634_09650 ced91a9cce78a2279a89ea03f2caffe4 397 SUPERFAMILY SSF52540 38 277 5.87E-88 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_09650 ced91a9cce78a2279a89ea03f2caffe4 397 Gene3D G3DSA:2.40.50.940 256 318 8.0E-12 T 12-10-2018 M634_09650 ced91a9cce78a2279a89ea03f2caffe4 397 SUPERFAMILY SSF50331 270 392 7.37E-9 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal M634_09650 ced91a9cce78a2279a89ea03f2caffe4 397 Gene3D G3DSA:2.40.50.140 319 339 8.0E-12 T 12-10-2018 M634_09650 ced91a9cce78a2279a89ea03f2caffe4 397 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 68 391 2.3E-156 T 12-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 M634_09650 ced91a9cce78a2279a89ea03f2caffe4 397 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_09650 ced91a9cce78a2279a89ea03f2caffe4 397 Gene3D G3DSA:3.40.50.300 37 255 5.2E-69 T 12-10-2018 M634_24725 5ab124664198b7b12c29acf63676f51d 183 SMART SM00862 24 99 7.6E-13 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_24725 5ab124664198b7b12c29acf63676f51d 183 Pfam PF00486 Transcriptional regulatory protein, C terminal 27 99 2.9E-15 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_24725 5ab124664198b7b12c29acf63676f51d 183 Gene3D G3DSA:1.10.10.10 5 111 3.5E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_24725 5ab124664198b7b12c29acf63676f51d 183 SUPERFAMILY SSF46894 5 100 2.35E-18 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M634_02725 5206b0fd408fb81a93c42fe911e01a7d 189 Pfam PF00293 NUDIX domain 46 154 1.2E-15 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 M634_02725 5206b0fd408fb81a93c42fe911e01a7d 189 Gene3D G3DSA:3.90.79.10 7 189 9.5E-50 T 12-10-2018 M634_02725 5206b0fd408fb81a93c42fe911e01a7d 189 SUPERFAMILY SSF55811 4 181 1.03E-40 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 M634_02725 5206b0fd408fb81a93c42fe911e01a7d 189 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 M634_16860 3bbb7b996e5c9b804bb058842b5d5403 126 PIRSF PIRSF028770 1 126 2.4E-73 T 12-10-2018 IPR011223 Uncharacterised conserved protein UCP028770 M634_16860 3bbb7b996e5c9b804bb058842b5d5403 126 Pfam PF11742 Protein of unknown function (DUF3302) 3 78 1.3E-40 T 12-10-2018 IPR011223 Uncharacterised conserved protein UCP028770 M634_19650 8a398d5573983e45847c43447790aa45 943 Gene3D G3DSA:2.70.98.10 87 462 6.6E-199 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 M634_19650 8a398d5573983e45847c43447790aa45 943 Gene3D G3DSA:1.20.1050.60 463 578 6.6E-199 T 12-10-2018 M634_19650 8a398d5573983e45847c43447790aa45 943 Pfam PF07971 Glycosyl hydrolase family 92 320 910 1.4E-123 T 12-10-2018 IPR012939 Glycosyl hydrolase family 92 M634_19650 8a398d5573983e45847c43447790aa45 943 Gene3D G3DSA:3.30.2080.10 383 913 6.6E-199 T 12-10-2018 M634_19650 8a398d5573983e45847c43447790aa45 943 SUPERFAMILY SSF48208 353 904 9.52E-8 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 M634_19650 8a398d5573983e45847c43447790aa45 943 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 441 914 5.4E-98 T 12-10-2018 IPR005887 Alpha-1,2-mannosidase, putative M634_19650 8a398d5573983e45847c43447790aa45 943 Gene3D G3DSA:1.20.1610.10 579 785 6.6E-199 T 12-10-2018 M634_12445 19b51c8cd8eb61a89dc2b5e4da964c04 210 ProSitePatterns PS01331 Thymidylate kinase signature. 96 108 - T 12-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 M634_12445 19b51c8cd8eb61a89dc2b5e4da964c04 210 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 199 1.9E-62 T 12-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 M634_12445 19b51c8cd8eb61a89dc2b5e4da964c04 210 Hamap MF_00165 Thymidylate kinase [tmk]. 5 207 27.634 T 12-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 M634_12445 19b51c8cd8eb61a89dc2b5e4da964c04 210 SUPERFAMILY SSF52540 2 209 4.65E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_12445 19b51c8cd8eb61a89dc2b5e4da964c04 210 Pfam PF02223 Thymidylate kinase 9 199 8.3E-58 T 12-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 M634_12445 19b51c8cd8eb61a89dc2b5e4da964c04 210 Gene3D G3DSA:3.40.50.300 4 209 9.3E-63 T 12-10-2018 M634_02545 15d956aac024caf43a9d7a215134baf2 205 Gene3D G3DSA:1.10.760.10 109 205 3.2E-27 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_02545 15d956aac024caf43a9d7a215134baf2 205 Pfam PF00034 Cytochrome c 116 201 1.0E-9 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_02545 15d956aac024caf43a9d7a215134baf2 205 Pfam PF00034 Cytochrome c 25 104 4.7E-10 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_02545 15d956aac024caf43a9d7a215134baf2 205 SUPERFAMILY SSF46626 6 106 1.38E-22 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_02545 15d956aac024caf43a9d7a215134baf2 205 Gene3D G3DSA:1.10.760.10 19 108 2.2E-27 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_02545 15d956aac024caf43a9d7a215134baf2 205 PRINTS PR00605 Class IC cytochrome C signature 79 101 6.6E-5 T 12-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 M634_02545 15d956aac024caf43a9d7a215134baf2 205 PRINTS PR00605 Class IC cytochrome C signature 30 41 6.6E-5 T 12-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 M634_02545 15d956aac024caf43a9d7a215134baf2 205 PIRSF PIRSF000005 1 205 1.4E-66 T 12-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 M634_02545 15d956aac024caf43a9d7a215134baf2 205 SUPERFAMILY SSF46626 114 203 3.25E-20 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_02250 6818635b6408b74da618b428f5df092d 517 Gene3D G3DSA:3.10.105.10 279 494 2.2E-125 T 12-10-2018 M634_02250 6818635b6408b74da618b428f5df092d 517 PIRSF PIRSF002741 21 512 3.5E-93 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 M634_02250 6818635b6408b74da618b428f5df092d 517 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 72 93 - T 12-10-2018 IPR023765 Solute-binding protein family 5, conserved site M634_02250 6818635b6408b74da618b428f5df092d 517 Gene3D G3DSA:3.40.190.10 32 278 2.2E-125 T 12-10-2018 M634_02250 6818635b6408b74da618b428f5df092d 517 SUPERFAMILY SSF53850 26 516 3.19E-129 T 12-10-2018 M634_02250 6818635b6408b74da618b428f5df092d 517 Gene3D G3DSA:3.90.76.10 57 165 2.2E-125 T 12-10-2018 M634_02250 6818635b6408b74da618b428f5df092d 517 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 67 424 1.2E-86 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain M634_00855 5c97abe1aef16cda845385b6f3aa277f 87 Pfam PF13937 Domain of unknown function (DUF4212) 9 86 1.1E-33 T 12-10-2018 IPR019886 Sodium symporter small subunit, predicted M634_00855 5c97abe1aef16cda845385b6f3aa277f 87 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 11 87 2.3E-35 T 12-10-2018 IPR019886 Sodium symporter small subunit, predicted M634_19680 3b5efbc2ea24b2e1cb68223609050e59 246 SMART SM01134 67 227 1.3E-45 T 12-10-2018 M634_19680 3b5efbc2ea24b2e1cb68223609050e59 246 SMART SM00420 4 56 5.7E-20 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 M634_19680 3b5efbc2ea24b2e1cb68223609050e59 246 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 22 36 2.0E-6 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 M634_19680 3b5efbc2ea24b2e1cb68223609050e59 246 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 36 54 2.0E-6 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 M634_19680 3b5efbc2ea24b2e1cb68223609050e59 246 ProSitePatterns PS00894 DeoR-type HTH domain signature. 4 38 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 M634_19680 3b5efbc2ea24b2e1cb68223609050e59 246 Pfam PF08220 DeoR-like helix-turn-helix domain 4 59 9.6E-17 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 M634_19680 3b5efbc2ea24b2e1cb68223609050e59 246 Gene3D G3DSA:1.10.10.10 1 52 1.8E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_19680 3b5efbc2ea24b2e1cb68223609050e59 246 SUPERFAMILY SSF46785 2 59 3.39E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_19680 3b5efbc2ea24b2e1cb68223609050e59 246 SUPERFAMILY SSF100950 70 227 3.03E-24 T 12-10-2018 IPR037171 NagB/RpiA transferase-like M634_19680 3b5efbc2ea24b2e1cb68223609050e59 246 Pfam PF00455 DeoR C terminal sensor domain 72 226 8.0E-41 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain M634_12545 2c5687f25578b86879971a5a6456d94e 688 SUPERFAMILY SSF50249 583 687 1.86E-32 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_12545 2c5687f25578b86879971a5a6456d94e 688 SUPERFAMILY SSF57770 147 181 4.19E-13 T 12-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 M634_12545 2c5687f25578b86879971a5a6456d94e 688 Gene3D G3DSA:1.10.730.10 394 531 3.8E-35 T 12-10-2018 M634_12545 2c5687f25578b86879971a5a6456d94e 688 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 549 687 8.6E-47 T 12-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 M634_12545 2c5687f25578b86879971a5a6456d94e 688 Gene3D G3DSA:2.40.50.140 577 688 8.7E-35 T 12-10-2018 M634_12545 2c5687f25578b86879971a5a6456d94e 688 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 20 31 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 M634_12545 2c5687f25578b86879971a5a6456d94e 688 SUPERFAMILY SSF47323 394 552 4.36E-45 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 M634_12545 2c5687f25578b86879971a5a6456d94e 688 Pfam PF09334 tRNA synthetases class I (M) 14 401 4.3E-166 T 12-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 M634_12545 2c5687f25578b86879971a5a6456d94e 688 Gene3D G3DSA:3.40.50.620 14 389 4.1E-162 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M634_12545 2c5687f25578b86879971a5a6456d94e 688 PRINTS PR01041 Methionyl-tRNA synthetase signature 15 28 5.6E-25 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 M634_12545 2c5687f25578b86879971a5a6456d94e 688 PRINTS PR01041 Methionyl-tRNA synthetase signature 296 311 5.6E-25 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 M634_12545 2c5687f25578b86879971a5a6456d94e 688 PRINTS PR01041 Methionyl-tRNA synthetase signature 47 61 5.6E-25 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 M634_12545 2c5687f25578b86879971a5a6456d94e 688 PRINTS PR01041 Methionyl-tRNA synthetase signature 256 267 5.6E-25 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 M634_12545 2c5687f25578b86879971a5a6456d94e 688 PRINTS PR01041 Methionyl-tRNA synthetase signature 389 400 5.6E-25 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 M634_12545 2c5687f25578b86879971a5a6456d94e 688 PRINTS PR01041 Methionyl-tRNA synthetase signature 95 106 5.6E-25 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 M634_12545 2c5687f25578b86879971a5a6456d94e 688 Hamap MF_00098 Methionine--tRNA ligase [metG]. 11 550 41.615 T 12-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 M634_12545 2c5687f25578b86879971a5a6456d94e 688 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 14 540 6.5E-202 T 12-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 M634_12545 2c5687f25578b86879971a5a6456d94e 688 SUPERFAMILY SSF52374 10 392 9.98E-102 T 12-10-2018 M634_12545 2c5687f25578b86879971a5a6456d94e 688 Gene3D G3DSA:2.20.28.20 147 181 4.1E-162 T 12-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 M634_12545 2c5687f25578b86879971a5a6456d94e 688 Pfam PF01588 Putative tRNA binding domain 593 685 6.1E-26 T 12-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 M634_21425 71239ae3c296578e9344472716c176be 283 SUPERFAMILY SSF53098 121 282 2.12E-43 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M634_21425 71239ae3c296578e9344472716c176be 283 Pfam PF13276 HTH-like domain 45 96 3.6E-9 T 12-10-2018 IPR025948 HTH-like domain M634_21425 71239ae3c296578e9344472716c176be 283 Pfam PF00665 Integrase core domain 121 234 9.5E-33 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M634_21425 71239ae3c296578e9344472716c176be 283 Gene3D G3DSA:3.30.420.10 118 270 1.2E-18 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M634_17695 a0531733bede8bcd720dc9efcbe886b6 214 Gene3D G3DSA:3.40.50.1390 1 124 6.1E-14 T 12-10-2018 M634_17695 a0531733bede8bcd720dc9efcbe886b6 214 SUPERFAMILY SSF53041 1 136 3.79E-17 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 M634_17695 a0531733bede8bcd720dc9efcbe886b6 214 Pfam PF00239 Resolvase, N terminal domain 4 136 4.2E-14 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 M634_17695 a0531733bede8bcd720dc9efcbe886b6 214 SMART SM00857 3 134 9.8E-7 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 M634_11795 18a38002b82dec2d4ecb69bd189da5ba 360 PIRSF PIRSF028101 4 360 8.8E-168 T 12-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 M634_11795 18a38002b82dec2d4ecb69bd189da5ba 360 Pfam PF07433 Protein of unknown function (DUF1513) 67 359 3.6E-113 T 12-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 M634_11795 18a38002b82dec2d4ecb69bd189da5ba 360 SUPERFAMILY SSF50969 60 314 2.04E-10 T 12-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like M634_10135 fd741dcf4578fff8d29624e8d497dc93 650 PRINTS PR00301 70kDa heat shock protein signature 22 35 5.1E-7 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M634_10135 fd741dcf4578fff8d29624e8d497dc93 650 PRINTS PR00301 70kDa heat shock protein signature 173 193 5.1E-7 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M634_10135 fd741dcf4578fff8d29624e8d497dc93 650 PRINTS PR00301 70kDa heat shock protein signature 240 250 5.1E-7 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M634_10135 fd741dcf4578fff8d29624e8d497dc93 650 Gene3D G3DSA:3.90.640.10 270 349 4.1E-35 T 12-10-2018 M634_10135 fd741dcf4578fff8d29624e8d497dc93 650 Pfam PF00012 Hsp70 protein 24 348 1.4E-15 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 M634_10135 fd741dcf4578fff8d29624e8d497dc93 650 Gene3D G3DSA:3.30.420.40 24 221 4.1E-35 T 12-10-2018 M634_10135 fd741dcf4578fff8d29624e8d497dc93 650 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 26 33 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 M634_10135 fd741dcf4578fff8d29624e8d497dc93 650 SUPERFAMILY SSF53067 229 491 1.47E-26 T 12-10-2018 M634_10135 fd741dcf4578fff8d29624e8d497dc93 650 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 234 247 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 M634_10135 fd741dcf4578fff8d29624e8d497dc93 650 Gene3D G3DSA:3.30.420.40 227 269 4.1E-35 T 12-10-2018 M634_10135 fd741dcf4578fff8d29624e8d497dc93 650 SUPERFAMILY SSF53067 22 215 9.78E-27 T 12-10-2018 M634_04300 a82aa8a24221f7b0bd7dbf36bc96a21b 470 Gene3D G3DSA:3.50.50.60 147 249 5.3E-10 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_04300 a82aa8a24221f7b0bd7dbf36bc96a21b 470 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 470 1.5E-250 T 12-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 M634_04300 a82aa8a24221f7b0bd7dbf36bc96a21b 470 SUPERFAMILY SSF46548 6 157 1.36E-40 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 M634_04300 a82aa8a24221f7b0bd7dbf36bc96a21b 470 Gene3D G3DSA:1.10.1060.10 11 146 3.5E-35 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 M634_04300 a82aa8a24221f7b0bd7dbf36bc96a21b 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 457 5.0E-23 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 M634_04300 a82aa8a24221f7b0bd7dbf36bc96a21b 470 Gene3D G3DSA:3.50.50.60 250 398 3.3E-44 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_04300 a82aa8a24221f7b0bd7dbf36bc96a21b 470 SUPERFAMILY SSF51971 145 399 3.35E-69 T 12-10-2018 M634_04300 a82aa8a24221f7b0bd7dbf36bc96a21b 470 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 2.2E-36 T 12-10-2018 M634_04300 a82aa8a24221f7b0bd7dbf36bc96a21b 470 PRINTS PR00419 Adrenodoxin reductase family signature 288 302 2.2E-36 T 12-10-2018 M634_04300 a82aa8a24221f7b0bd7dbf36bc96a21b 470 PRINTS PR00419 Adrenodoxin reductase family signature 322 335 2.2E-36 T 12-10-2018 M634_04300 a82aa8a24221f7b0bd7dbf36bc96a21b 470 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 2.2E-36 T 12-10-2018 M634_04300 a82aa8a24221f7b0bd7dbf36bc96a21b 470 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 2.2E-36 T 12-10-2018 M634_04300 a82aa8a24221f7b0bd7dbf36bc96a21b 470 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 7.0E-39 T 12-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 M634_06415 997d56b570babebce9e32de15e312e6d 407 SUPERFAMILY SSF53901 215 406 9.72E-60 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M634_06415 997d56b570babebce9e32de15e312e6d 407 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 363 4.5E-28 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal M634_06415 997d56b570babebce9e32de15e312e6d 407 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 156 172 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site M634_06415 997d56b570babebce9e32de15e312e6d 407 Gene3D G3DSA:3.40.47.10 1 255 1.2E-59 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M634_06415 997d56b570babebce9e32de15e312e6d 407 SUPERFAMILY SSF53901 2 252 1.95E-55 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M634_06415 997d56b570babebce9e32de15e312e6d 407 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 247 2.8E-40 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal M634_06415 997d56b570babebce9e32de15e312e6d 407 Gene3D G3DSA:3.40.47.10 261 407 1.8E-43 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M634_06415 997d56b570babebce9e32de15e312e6d 407 SMART SM00825 Beta-ketoacyl synthase 5 377 2.0E-11 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain M634_11915 50b39c886d21923bad5c4df0ddc90773 417 SUPERFAMILY SSF51735 3 179 1.28E-15 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_11915 50b39c886d21923bad5c4df0ddc90773 417 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 3 144 2.1E-32 T 12-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 M634_11915 50b39c886d21923bad5c4df0ddc90773 417 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 149 395 2.2E-30 T 12-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 M634_11915 50b39c886d21923bad5c4df0ddc90773 417 Gene3D G3DSA:3.30.360.10 159 355 3.8E-144 T 12-10-2018 M634_11915 50b39c886d21923bad5c4df0ddc90773 417 Gene3D G3DSA:3.40.50.720 4 398 3.8E-144 T 12-10-2018 M634_11290 c900ee3c060b17825b73b4548f0fd598 453 Pfam PF03313 Serine dehydratase alpha chain 184 448 9.6E-98 T 12-10-2018 IPR005130 Serine dehydratase-like, alpha subunit M634_11290 c900ee3c060b17825b73b4548f0fd598 453 Pfam PF03315 Serine dehydratase beta chain 3 155 2.4E-54 T 12-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 M634_11290 c900ee3c060b17825b73b4548f0fd598 453 Gene3D G3DSA:3.30.1330.90 10 159 1.8E-49 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 M634_11290 c900ee3c060b17825b73b4548f0fd598 453 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 1.6E-227 T 12-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 M634_11290 c900ee3c060b17825b73b4548f0fd598 453 SUPERFAMILY SSF143548 16 157 2.09E-44 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 M634_04885 be3cd9aed86d91ba2c3280337128693b 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 5.9E-38 T 12-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 M634_04885 be3cd9aed86d91ba2c3280337128693b 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 1.9E-57 T 12-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 M634_04885 be3cd9aed86d91ba2c3280337128693b 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 9.2E-27 T 12-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 M634_04885 be3cd9aed86d91ba2c3280337128693b 107 SUPERFAMILY SSF89360 1 96 1.01E-34 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 M634_04885 be3cd9aed86d91ba2c3280337128693b 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 12-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 M634_04885 be3cd9aed86d91ba2c3280337128693b 107 Gene3D G3DSA:2.60.300.12 2 107 1.0E-38 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 M634_00285 fc247a0be3fc2c3852d3723cb9858014 877 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 535 547 - T 12-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 M634_00285 fc247a0be3fc2c3852d3723cb9858014 877 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 877 18.026 T 12-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 M634_00285 fc247a0be3fc2c3852d3723cb9858014 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 384 404 2.7E-67 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 M634_00285 fc247a0be3fc2c3852d3723cb9858014 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 245 260 2.7E-67 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 M634_00285 fc247a0be3fc2c3852d3723cb9858014 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 2.7E-67 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 M634_00285 fc247a0be3fc2c3852d3723cb9858014 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 575 604 2.7E-67 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 M634_00285 fc247a0be3fc2c3852d3723cb9858014 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 707 733 2.7E-67 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 M634_00285 fc247a0be3fc2c3852d3723cb9858014 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 533 553 2.7E-67 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 M634_00285 fc247a0be3fc2c3852d3723cb9858014 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 2.7E-67 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 M634_00285 fc247a0be3fc2c3852d3723cb9858014 877 SUPERFAMILY SSF51621 6 877 0.0 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 M634_00285 fc247a0be3fc2c3852d3723cb9858014 877 Gene3D G3DSA:1.20.1440.90 273 387 7.4E-27 T 12-10-2018 M634_00285 fc247a0be3fc2c3852d3723cb9858014 877 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 877 7.1E-291 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 M634_00285 fc247a0be3fc2c3852d3723cb9858014 877 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 12-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 M634_05810 1f8d575bbaea04d4178395dfc47a880a 373 Pfam PF13609 Gram-negative porin 10 342 3.3E-35 T 12-10-2018 M634_05810 1f8d575bbaea04d4178395dfc47a880a 373 Gene3D G3DSA:2.40.160.10 44 373 7.2E-44 T 12-10-2018 IPR023614 Porin domain superfamily M634_05810 1f8d575bbaea04d4178395dfc47a880a 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 117 127 5.2E-5 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 M634_05810 1f8d575bbaea04d4178395dfc47a880a 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 365 373 5.2E-5 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 M634_05810 1f8d575bbaea04d4178395dfc47a880a 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 177 188 5.2E-5 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 M634_05810 1f8d575bbaea04d4178395dfc47a880a 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 278 290 5.2E-5 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 M634_05810 1f8d575bbaea04d4178395dfc47a880a 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 73 84 5.2E-5 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 M634_05810 1f8d575bbaea04d4178395dfc47a880a 373 SUPERFAMILY SSF56935 44 373 6.11E-41 T 12-10-2018 M634_19260 8a62a3e5b897bd54060c55ec33162a18 228 Pfam PF13280 WYL domain 140 226 2.4E-18 T 12-10-2018 IPR026881 WYL domain M634_19260 8a62a3e5b897bd54060c55ec33162a18 228 Pfam PF08279 HTH domain 6 59 1.8E-18 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 M634_19260 8a62a3e5b897bd54060c55ec33162a18 228 Gene3D G3DSA:1.10.10.10 1 64 1.1E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_19260 8a62a3e5b897bd54060c55ec33162a18 228 SUPERFAMILY SSF46785 1 61 3.16E-11 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_21725 86eb23c67ef9fb42ba0d8605144dc82b 286 Pfam PF00892 EamA-like transporter family 2 127 4.1E-15 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M634_21725 86eb23c67ef9fb42ba0d8605144dc82b 286 Pfam PF00892 EamA-like transporter family 142 272 5.0E-12 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M634_21725 86eb23c67ef9fb42ba0d8605144dc82b 286 SUPERFAMILY SSF103481 33 130 1.57E-18 T 12-10-2018 M634_21725 86eb23c67ef9fb42ba0d8605144dc82b 286 SUPERFAMILY SSF103481 177 275 2.35E-15 T 12-10-2018 M634_05885 156b2f6369c2564ee5df6ad55360620c 137 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 137 2.9E-51 T 12-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 M634_05885 156b2f6369c2564ee5df6ad55360620c 137 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site M634_05885 156b2f6369c2564ee5df6ad55360620c 137 Pfam PF00460 Flagella basal body rod protein 7 32 1.8E-7 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 M634_05885 156b2f6369c2564ee5df6ad55360620c 137 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 91 135 3.0E-12 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain M634_19350 dec5def1a2eda9c187250347bdd368f3 367 SUPERFAMILY SSF53383 3 362 1.1E-87 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_19350 dec5def1a2eda9c187250347bdd368f3 367 Pfam PF00266 Aminotransferase class-V 36 316 6.0E-30 T 12-10-2018 IPR000192 Aminotransferase class V domain M634_19350 dec5def1a2eda9c187250347bdd368f3 367 Gene3D G3DSA:3.40.640.10 16 262 7.0E-123 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_19350 dec5def1a2eda9c187250347bdd368f3 367 TIGRFAM TIGR02326 transamin_PhnW: 2-aminoethylphosphonate--pyruvate transaminase 2 365 6.6E-202 T 12-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 M634_19350 dec5def1a2eda9c187250347bdd368f3 367 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 1 367 214.261 T 12-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 M634_19350 dec5def1a2eda9c187250347bdd368f3 367 TIGRFAM TIGR03301 PhnW-AepZ: 2-aminoethylphosphonate aminotransferase 6 362 1.7E-170 T 12-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 M634_19350 dec5def1a2eda9c187250347bdd368f3 367 PIRSF PIRSF000524 1 365 2.9E-57 T 12-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 M634_19350 dec5def1a2eda9c187250347bdd368f3 367 Gene3D G3DSA:3.90.1150.10 8 353 7.0E-123 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M634_01155 fcb7946e9a852872d6257ab5add748b6 307 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 82 233 4.7E-12 T 12-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 M634_01155 fcb7946e9a852872d6257ab5add748b6 307 PIRSF PIRSF000545 1 307 1.7E-145 T 12-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 M634_01155 fcb7946e9a852872d6257ab5add748b6 307 Hamap MF_00215 Pantothenate kinase [coaA]. 1 307 179.72 T 12-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 M634_01155 fcb7946e9a852872d6257ab5add748b6 307 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 3 307 3.4E-145 T 12-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 M634_01155 fcb7946e9a852872d6257ab5add748b6 307 SUPERFAMILY SSF52540 3 306 1.86E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_01155 fcb7946e9a852872d6257ab5add748b6 307 Gene3D G3DSA:3.40.50.300 1 307 2.9E-93 T 12-10-2018 M634_01790 a4a317662337f6d4f5137e9a07bcda3c 694 SMART SM00642 203 656 3.0E-78 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 M634_01790 a4a317662337f6d4f5137e9a07bcda3c 694 Gene3D G3DSA:3.20.20.80 192 660 1.9E-81 T 12-10-2018 M634_01790 a4a317662337f6d4f5137e9a07bcda3c 694 PIRSF PIRSF036917 1 694 0.0 T 12-10-2018 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 M634_01790 a4a317662337f6d4f5137e9a07bcda3c 694 SUPERFAMILY SSF51445 190 665 7.92E-79 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M634_01790 a4a317662337f6d4f5137e9a07bcda3c 694 Pfam PF00128 Alpha amylase, catalytic domain 236 614 3.6E-38 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 M634_13670 1d3ad8dc8c9a8983d3bfe9ea1a73dfc1 136 TIGRFAM TIGR00208 fliS: flagellar protein FliS 4 122 6.2E-24 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 M634_13670 1d3ad8dc8c9a8983d3bfe9ea1a73dfc1 136 PIRSF PIRSF039090 1 133 1.6E-42 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 M634_13670 1d3ad8dc8c9a8983d3bfe9ea1a73dfc1 136 Gene3D G3DSA:1.20.120.340 2 126 1.1E-39 T 12-10-2018 M634_13670 1d3ad8dc8c9a8983d3bfe9ea1a73dfc1 136 Pfam PF02561 Flagellar protein FliS 6 122 2.4E-37 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 M634_13670 1d3ad8dc8c9a8983d3bfe9ea1a73dfc1 136 SUPERFAMILY SSF101116 6 127 4.05E-39 T 12-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 M634_09385 99038d1938832eb07ccf8499bc7600d5 165 SUPERFAMILY SSF54637 12 126 3.66E-15 T 12-10-2018 IPR029069 HotDog domain superfamily M634_09385 99038d1938832eb07ccf8499bc7600d5 165 Gene3D G3DSA:3.10.129.10 5 136 8.8E-26 T 12-10-2018 M634_09385 99038d1938832eb07ccf8499bc7600d5 165 Pfam PF14539 Domain of unknown function (DUF4442) 18 105 1.3E-10 T 12-10-2018 IPR027961 Protein of unknown function DUF4442 M634_04795 2d167a66e02ff636344f0c8ff3f3e050 258 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 3 227 1.5E-112 T 12-10-2018 IPR022488 Polyphosphate kinase-2-related M634_04795 2d167a66e02ff636344f0c8ff3f3e050 258 SUPERFAMILY SSF52540 35 223 8.04E-31 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_04795 2d167a66e02ff636344f0c8ff3f3e050 258 PIRSF PIRSF028756 1 258 4.5E-132 T 12-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 M634_04795 2d167a66e02ff636344f0c8ff3f3e050 258 Gene3D G3DSA:3.40.50.300 1 240 4.2E-100 T 12-10-2018 M634_04795 2d167a66e02ff636344f0c8ff3f3e050 258 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 3 228 2.4E-115 T 12-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 M634_24175 7aadb0982140f129e489990274c8ccf7 380 Gene3D G3DSA:1.10.287.470 96 169 1.6E-95 T 12-10-2018 M634_24175 7aadb0982140f129e489990274c8ccf7 380 Gene3D G3DSA:2.40.50.100 61 205 1.6E-95 T 12-10-2018 M634_24175 7aadb0982140f129e489990274c8ccf7 380 Pfam PF13533 Biotin-lipoyl like 63 110 4.3E-14 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain M634_24175 7aadb0982140f129e489990274c8ccf7 380 Gene3D G3DSA:2.40.420.20 302 370 1.6E-95 T 12-10-2018 M634_24175 7aadb0982140f129e489990274c8ccf7 380 Gene3D G3DSA:2.40.30.170 49 300 1.6E-95 T 12-10-2018 M634_24175 7aadb0982140f129e489990274c8ccf7 380 SUPERFAMILY SSF111369 50 295 1.31E-59 T 12-10-2018 M634_24175 7aadb0982140f129e489990274c8ccf7 380 Pfam PF13437 HlyD family secretion protein 173 287 8.6E-8 T 12-10-2018 M634_24175 7aadb0982140f129e489990274c8ccf7 380 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 37 371 1.0E-84 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 M634_03270 4173539f4513e37e52a3ecd2869efe15 73 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 69 32.484 T 12-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_03270 4173539f4513e37e52a3ecd2869efe15 73 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 1.1E-35 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_03270 4173539f4513e37e52a3ecd2869efe15 73 Pfam PF01197 Ribosomal protein L31 1 66 3.8E-32 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_03270 4173539f4513e37e52a3ecd2869efe15 73 SUPERFAMILY SSF143800 1 68 2.63E-27 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03270 4173539f4513e37e52a3ecd2869efe15 73 Gene3D G3DSA:2.30.170.50 1 71 1.6E-33 T 12-10-2018 M634_03270 4173539f4513e37e52a3ecd2869efe15 73 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_03270 4173539f4513e37e52a3ecd2869efe15 73 PRINTS PR01249 Ribosomal protein L31 signature 2 19 7.1E-23 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_03270 4173539f4513e37e52a3ecd2869efe15 73 PRINTS PR01249 Ribosomal protein L31 signature 32 47 7.1E-23 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_03270 4173539f4513e37e52a3ecd2869efe15 73 PRINTS PR01249 Ribosomal protein L31 signature 47 65 7.1E-23 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_13895 b18b099211f86e4ae351a4cd4379c5f9 103 Pfam PF00034 Cytochrome c 27 103 2.1E-10 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_13895 b18b099211f86e4ae351a4cd4379c5f9 103 Gene3D G3DSA:1.10.760.10 22 103 1.2E-26 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_13895 b18b099211f86e4ae351a4cd4379c5f9 103 SUPERFAMILY SSF46626 11 102 3.15E-23 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_13895 b18b099211f86e4ae351a4cd4379c5f9 103 PRINTS PR00605 Class IC cytochrome C signature 77 99 8.5E-6 T 12-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 M634_13895 b18b099211f86e4ae351a4cd4379c5f9 103 PRINTS PR00605 Class IC cytochrome C signature 32 43 8.5E-6 T 12-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 M634_15360 adac311cb78ac87d8abc2de1e4a3ee5a 102 Pfam PF05164 Cell division protein ZapA 6 89 7.5E-20 T 12-10-2018 IPR007838 Cell division protein ZapA-like M634_15360 adac311cb78ac87d8abc2de1e4a3ee5a 102 Gene3D G3DSA:1.10.20.30 1 47 7.0E-19 T 12-10-2018 M634_15360 adac311cb78ac87d8abc2de1e4a3ee5a 102 SUPERFAMILY SSF102829 6 95 3.01E-24 T 12-10-2018 IPR036192 Cell division protein ZapA-like superfamily M634_07640 928882980f5ab1e88ba07e4124eb3a5b 211 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 123 206 8.9E-32 T 12-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 M634_07640 928882980f5ab1e88ba07e4124eb3a5b 211 SUPERFAMILY SSF101386 123 210 2.43E-25 T 12-10-2018 M634_07640 928882980f5ab1e88ba07e4124eb3a5b 211 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 123 210 8.0E-18 T 12-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 M634_07640 928882980f5ab1e88ba07e4124eb3a5b 211 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 38 110 1.8E-31 T 12-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 M634_07640 928882980f5ab1e88ba07e4124eb3a5b 211 SUPERFAMILY SSF141734 14 124 9.81E-46 T 12-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 M634_07640 928882980f5ab1e88ba07e4124eb3a5b 211 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 13 211 37.835 T 12-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 M634_07640 928882980f5ab1e88ba07e4124eb3a5b 211 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 120 206 19.57 T 12-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 M634_07640 928882980f5ab1e88ba07e4124eb3a5b 211 Gene3D G3DSA:1.10.287.1080 120 211 1.2E-29 T 12-10-2018 M634_07640 928882980f5ab1e88ba07e4124eb3a5b 211 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 61 110 4.0E-24 T 12-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 M634_07640 928882980f5ab1e88ba07e4124eb3a5b 211 Gene3D G3DSA:3.10.20.400 4 102 5.2E-36 T 12-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 M634_24710 a1ee764270e82a9bfc73f2ac616cb753 227 SUPERFAMILY SSF161098 112 212 8.5E-5 T 12-10-2018 IPR035906 MetI-like superfamily M634_17690 d5e67cb08d862a65f21cd13102b1bf98 663 SUPERFAMILY SSF51011 556 648 3.16E-13 T 12-10-2018 M634_17690 d5e67cb08d862a65f21cd13102b1bf98 663 Gene3D G3DSA:2.60.40.10 5 115 2.9E-19 T 12-10-2018 IPR013783 Immunoglobulin-like fold M634_17690 d5e67cb08d862a65f21cd13102b1bf98 663 Pfam PF00128 Alpha amylase, catalytic domain 199 268 1.3E-5 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 M634_17690 d5e67cb08d862a65f21cd13102b1bf98 663 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 7 647 3.7E-201 T 12-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 M634_17690 d5e67cb08d862a65f21cd13102b1bf98 663 Gene3D G3DSA:2.60.40.1180 555 649 1.9E-6 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta M634_17690 d5e67cb08d862a65f21cd13102b1bf98 663 SUPERFAMILY SSF51445 112 542 1.17E-96 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M634_17690 d5e67cb08d862a65f21cd13102b1bf98 663 SMART SM00642 145 547 2.6E-4 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 M634_17690 d5e67cb08d862a65f21cd13102b1bf98 663 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 10 87 5.9E-10 T 12-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 M634_17690 d5e67cb08d862a65f21cd13102b1bf98 663 Gene3D G3DSA:3.20.20.80 116 551 1.8E-142 T 12-10-2018 M634_17690 d5e67cb08d862a65f21cd13102b1bf98 663 SUPERFAMILY SSF81296 7 123 8.68E-22 T 12-10-2018 IPR014756 Immunoglobulin E-set M634_03645 356a8646bb314583c4cc7f4197ad8fc8 160 PIRSF PIRSF000194 1 160 5.4E-62 T 12-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 M634_03645 356a8646bb314583c4cc7f4197ad8fc8 160 Gene3D G3DSA:3.40.430.10 1 160 6.5E-60 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 M634_03645 356a8646bb314583c4cc7f4197ad8fc8 160 PRINTS PR00070 Dihydrofolate reductase signature 92 106 3.0E-14 T 12-10-2018 M634_03645 356a8646bb314583c4cc7f4197ad8fc8 160 PRINTS PR00070 Dihydrofolate reductase signature 41 52 3.0E-14 T 12-10-2018 M634_03645 356a8646bb314583c4cc7f4197ad8fc8 160 PRINTS PR00070 Dihydrofolate reductase signature 14 24 3.0E-14 T 12-10-2018 M634_03645 356a8646bb314583c4cc7f4197ad8fc8 160 PRINTS PR00070 Dihydrofolate reductase signature 28 36 3.0E-14 T 12-10-2018 M634_03645 356a8646bb314583c4cc7f4197ad8fc8 160 SUPERFAMILY SSF53597 1 159 1.82E-57 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 M634_03645 356a8646bb314583c4cc7f4197ad8fc8 160 Pfam PF00186 Dihydrofolate reductase 3 159 9.0E-61 T 12-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 M634_03645 356a8646bb314583c4cc7f4197ad8fc8 160 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 14 36 - T 12-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 M634_07655 65690ee3ed4aab1b59ee7c0425adb9f7 217 Gene3D G3DSA:3.60.21.10 2 211 1.1E-13 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like M634_07655 65690ee3ed4aab1b59ee7c0425adb9f7 217 SUPERFAMILY SSF56300 5 198 1.57E-24 T 12-10-2018 M634_07655 65690ee3ed4aab1b59ee7c0425adb9f7 217 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 216 107.691 T 12-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 M634_07655 65690ee3ed4aab1b59ee7c0425adb9f7 217 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 1 207 2.1E-91 T 12-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 M634_01645 b588724b22fa0ab4abb8c84e4578ff3b 375 Pfam PF04055 Radical SAM superfamily 81 222 1.8E-8 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 M634_01645 b588724b22fa0ab4abb8c84e4578ff3b 375 SMART SM00876 256 364 2.2E-34 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 M634_01645 b588724b22fa0ab4abb8c84e4578ff3b 375 SUPERFAMILY SSF102114 38 366 6.93E-53 T 12-10-2018 M634_01645 b588724b22fa0ab4abb8c84e4578ff3b 375 Gene3D G3DSA:3.20.20.70 8 368 1.0E-105 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_01645 b588724b22fa0ab4abb8c84e4578ff3b 375 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 2 371 3.8E-182 T 12-10-2018 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 M634_01645 b588724b22fa0ab4abb8c84e4578ff3b 375 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 256 362 7.9E-26 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 M634_18875 42c00e2c50d987e3f619b7a00928b64e 390 Gene3D G3DSA:1.25.40.10 170 381 3.8E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_18875 42c00e2c50d987e3f619b7a00928b64e 390 Gene3D G3DSA:1.25.40.10 27 169 2.9E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_18875 42c00e2c50d987e3f619b7a00928b64e 390 SMART SM00028 336 369 25.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_18875 42c00e2c50d987e3f619b7a00928b64e 390 SMART SM00028 100 133 22.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_18875 42c00e2c50d987e3f619b7a00928b64e 390 SMART SM00028 274 307 130.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_18875 42c00e2c50d987e3f619b7a00928b64e 390 Pfam PF14559 Tetratricopeptide repeat 315 369 9.7E-6 T 12-10-2018 M634_18875 42c00e2c50d987e3f619b7a00928b64e 390 SUPERFAMILY SSF48452 93 229 1.08E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_18875 42c00e2c50d987e3f619b7a00928b64e 390 SUPERFAMILY SSF48452 184 369 1.93E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_15160 078cd08b0ff619bb2e278d02f79f74bf 395 PIRSF PIRSF000726 3 64 4.9E-23 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 M634_15160 078cd08b0ff619bb2e278d02f79f74bf 395 PIRSF PIRSF000726 286 386 0.13 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 M634_15160 078cd08b0ff619bb2e278d02f79f74bf 395 PIRSF PIRSF000726 59 311 2.9E-73 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 M634_15160 078cd08b0ff619bb2e278d02f79f74bf 395 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 65 379 2.6E-76 T 12-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 M634_15160 078cd08b0ff619bb2e278d02f79f74bf 395 SUPERFAMILY SSF53633 6 241 4.84E-74 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily M634_15160 078cd08b0ff619bb2e278d02f79f74bf 395 Gene3D G3DSA:3.40.1160.10 4 258 6.5E-86 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily M634_15160 078cd08b0ff619bb2e278d02f79f74bf 395 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 12-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 M634_15160 078cd08b0ff619bb2e278d02f79f74bf 395 Pfam PF00696 Amino acid kinase family 5 231 3.8E-52 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 M634_10085 b5e8db293e5038bf4c66a45890411e54 283 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 2 276 9.8E-51 T 12-10-2018 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 M634_15905 8a6bad0e7acaa4524cbccb70f3ae63a1 91 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 12-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site M634_15905 8a6bad0e7acaa4524cbccb70f3ae63a1 91 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 41 56 - T 12-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site M634_15905 8a6bad0e7acaa4524cbccb70f3ae63a1 91 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 3 84 1.8E-21 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like M634_15905 8a6bad0e7acaa4524cbccb70f3ae63a1 91 PRINTS PR00107 Phosphocarrier protein signature 40 55 8.7E-10 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like M634_15905 8a6bad0e7acaa4524cbccb70f3ae63a1 91 PRINTS PR00107 Phosphocarrier protein signature 14 30 8.7E-10 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like M634_15905 8a6bad0e7acaa4524cbccb70f3ae63a1 91 PRINTS PR00107 Phosphocarrier protein signature 55 72 8.7E-10 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like M634_15905 8a6bad0e7acaa4524cbccb70f3ae63a1 91 SUPERFAMILY SSF55594 4 90 7.07E-25 T 12-10-2018 IPR035895 HPr-like superfamily M634_15905 8a6bad0e7acaa4524cbccb70f3ae63a1 91 Gene3D G3DSA:3.30.1340.10 1 85 1.1E-26 T 12-10-2018 IPR035895 HPr-like superfamily M634_15905 8a6bad0e7acaa4524cbccb70f3ae63a1 91 Pfam PF00381 PTS HPr component phosphorylation site 4 84 2.0E-23 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like M634_00930 2575495aef871798a88862dcd2069eba 98 SUPERFAMILY SSF46689 8 98 1.84E-24 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_00930 2575495aef871798a88862dcd2069eba 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 31.402 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 M634_00930 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 2.0E-31 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 M634_00930 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 2.0E-31 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 M634_00930 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 2.0E-31 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 M634_00930 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 2.0E-31 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 M634_00930 2575495aef871798a88862dcd2069eba 98 PIRSF PIRSF002097 1 98 2.6E-44 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 M634_00930 2575495aef871798a88862dcd2069eba 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 4.0E-14 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M634_00930 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 3.3E-13 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M634_00930 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 3.3E-13 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M634_00930 2575495aef871798a88862dcd2069eba 98 Gene3D G3DSA:1.10.10.60 1 98 2.7E-32 T 12-10-2018 M634_14210 c9973ff2ced807b08eeeb2bffabfc2ad 199 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 4 182 5.3E-63 T 12-10-2018 IPR006287 Protein/nucleic acid deglycase DJ-1 Reactome: R-HSA-3899300 M634_14210 c9973ff2ced807b08eeeb2bffabfc2ad 199 Pfam PF01965 DJ-1/PfpI family 3 169 1.4E-40 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 M634_14210 c9973ff2ced807b08eeeb2bffabfc2ad 199 SUPERFAMILY SSF52317 3 190 4.26E-44 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M634_14210 c9973ff2ced807b08eeeb2bffabfc2ad 199 Gene3D G3DSA:3.40.50.880 1 193 7.0E-49 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M634_05555 700011e1eab7fced05109d7091dfb00c 505 Gene3D G3DSA:3.60.110.10 210 481 1.3E-14 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily M634_05555 700011e1eab7fced05109d7091dfb00c 505 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 8 490 23.541 T 12-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 M634_05555 700011e1eab7fced05109d7091dfb00c 505 Pfam PF00795 Carbon-nitrogen hydrolase 221 470 5.0E-37 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 M634_05555 700011e1eab7fced05109d7091dfb00c 505 SUPERFAMILY SSF56317 213 486 7.59E-41 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily M634_05555 700011e1eab7fced05109d7091dfb00c 505 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 61 453 4.9E-98 T 12-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 M634_23980 7122e63bd40c5959a3f5d8a1e6a6c838 385 PRINTS PR00166 Aromatic amino acid permease signature 306 324 1.1E-35 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 M634_23980 7122e63bd40c5959a3f5d8a1e6a6c838 385 PRINTS PR00166 Aromatic amino acid permease signature 82 102 1.1E-35 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 M634_23980 7122e63bd40c5959a3f5d8a1e6a6c838 385 PRINTS PR00166 Aromatic amino acid permease signature 37 56 1.1E-35 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 M634_23980 7122e63bd40c5959a3f5d8a1e6a6c838 385 PRINTS PR00166 Aromatic amino acid permease signature 182 204 1.1E-35 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 M634_23980 7122e63bd40c5959a3f5d8a1e6a6c838 385 PRINTS PR00166 Aromatic amino acid permease signature 10 33 1.1E-35 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 M634_23980 7122e63bd40c5959a3f5d8a1e6a6c838 385 PRINTS PR00166 Aromatic amino acid permease signature 327 346 1.1E-35 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 M634_23980 7122e63bd40c5959a3f5d8a1e6a6c838 385 PRINTS PR00166 Aromatic amino acid permease signature 147 167 1.1E-35 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 M634_23980 7122e63bd40c5959a3f5d8a1e6a6c838 385 Pfam PF03222 Tryptophan/tyrosine permease family 4 381 4.2E-76 T 12-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 M634_09275 4598bbc77855f965108d0845a98602ef 232 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 205 4.7E-84 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 M634_09275 4598bbc77855f965108d0845a98602ef 232 Gene3D G3DSA:3.40.50.620 1 230 6.2E-81 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M634_09275 4598bbc77855f965108d0845a98602ef 232 Pfam PF06508 Queuosine biosynthesis protein QueC 3 212 1.8E-85 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 M634_09275 4598bbc77855f965108d0845a98602ef 232 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 218 51.372 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 M634_09275 4598bbc77855f965108d0845a98602ef 232 PIRSF PIRSF006293 1 225 5.9E-84 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 M634_09275 4598bbc77855f965108d0845a98602ef 232 SUPERFAMILY SSF52402 1 211 2.87E-67 T 12-10-2018 M634_08120 7350f19abab45d1486bb51535b894ff6 165 SMART SM00448 4 125 3.2E-11 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_08120 7350f19abab45d1486bb51535b894ff6 165 SUPERFAMILY SSF52172 1 142 3.27E-20 T 12-10-2018 IPR011006 CheY-like superfamily M634_08120 7350f19abab45d1486bb51535b894ff6 165 Gene3D G3DSA:3.40.50.2300 1 136 1.0E-18 T 12-10-2018 M634_08120 7350f19abab45d1486bb51535b894ff6 165 Pfam PF00072 Response regulator receiver domain 6 126 9.9E-14 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_00450 179a16c1356a0771f282490c6be1276c 339 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 337 2.0E-137 T 12-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 M634_00450 179a16c1356a0771f282490c6be1276c 339 SUPERFAMILY SSF55729 1 338 5.04E-129 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_00450 179a16c1356a0771f282490c6be1276c 339 Gene3D G3DSA:2.40.40.20 277 339 1.3E-5 T 12-10-2018 M634_00450 179a16c1356a0771f282490c6be1276c 339 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 338 2.5E-132 T 12-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 M634_00450 179a16c1356a0771f282490c6be1276c 339 Gene3D G3DSA:3.40.630.30 1 274 3.2E-113 T 12-10-2018 M634_00450 179a16c1356a0771f282490c6be1276c 339 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 338 5.1E-133 T 12-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 M634_07125 43f73484a5f89de8a7dc4e565a89e3ba 267 PRINTS PR00412 Epoxide hydrolase signature 24 42 1.5E-5 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 M634_07125 43f73484a5f89de8a7dc4e565a89e3ba 267 PRINTS PR00412 Epoxide hydrolase signature 237 259 1.5E-5 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 M634_07125 43f73484a5f89de8a7dc4e565a89e3ba 267 PRINTS PR00412 Epoxide hydrolase signature 205 221 1.5E-5 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 M634_07125 43f73484a5f89de8a7dc4e565a89e3ba 267 SUPERFAMILY SSF53474 15 260 1.85E-44 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_07125 43f73484a5f89de8a7dc4e565a89e3ba 267 Pfam PF00561 alpha/beta hydrolase fold 19 121 6.8E-22 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 M634_07125 43f73484a5f89de8a7dc4e565a89e3ba 267 Gene3D G3DSA:3.40.50.1820 7 265 1.8E-41 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_08650 7e3d2ec68476a0aa8489ed9916f4ff9f 376 SUPERFAMILY SSF51182 78 374 2.75E-91 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily M634_08650 7e3d2ec68476a0aa8489ed9916f4ff9f 376 Pfam PF04209 homogentisate 1,2-dioxygenase 87 374 5.8E-22 T 12-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 M634_08650 7e3d2ec68476a0aa8489ed9916f4ff9f 376 Gene3D G3DSA:2.60.120.10 66 167 3.0E-12 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M634_05905 8747ec9bd5388ec99d4a1fbecc457817 249 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 172 242 9.7E-22 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain M634_05905 8747ec9bd5388ec99d4a1fbecc457817 249 Pfam PF00460 Flagella basal body rod protein 8 35 2.0E-5 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 M634_05905 8747ec9bd5388ec99d4a1fbecc457817 249 SUPERFAMILY SSF117143 77 207 5.23E-16 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like M634_05905 8747ec9bd5388ec99d4a1fbecc457817 249 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 3.3E-33 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G M634_08100 fac2abdf50f7403e7ab4c70bf155f1af 301 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 134 299 4.0E-78 T 12-10-2018 IPR005642 Lysine exporter LysO M634_08100 fac2abdf50f7403e7ab4c70bf155f1af 301 Pfam PF03956 Lysine exporter LysO 112 297 1.4E-52 T 12-10-2018 IPR005642 Lysine exporter LysO M634_03435 acea32ec53857cd1f2a9b550f9561b7b 459 Pfam PF00271 Helicase conserved C-terminal domain 231 338 8.8E-27 T 12-10-2018 IPR001650 Helicase, C-terminal M634_03435 acea32ec53857cd1f2a9b550f9561b7b 459 Gene3D G3DSA:3.40.50.300 210 371 3.2E-44 T 12-10-2018 M634_03435 acea32ec53857cd1f2a9b550f9561b7b 459 SMART SM00490 257 338 1.0E-26 T 12-10-2018 IPR001650 Helicase, C-terminal M634_03435 acea32ec53857cd1f2a9b550f9561b7b 459 Gene3D G3DSA:3.30.70.330 385 458 3.0E-17 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily M634_03435 acea32ec53857cd1f2a9b550f9561b7b 459 Pfam PF00270 DEAD/DEAH box helicase 28 195 4.9E-48 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 M634_03435 acea32ec53857cd1f2a9b550f9561b7b 459 Gene3D G3DSA:3.40.50.300 2 209 3.0E-75 T 12-10-2018 M634_03435 acea32ec53857cd1f2a9b550f9561b7b 459 Pfam PF03880 DbpA RNA binding domain 386 456 4.4E-21 T 12-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain M634_03435 acea32ec53857cd1f2a9b550f9561b7b 459 SMART SM00487 23 225 2.8E-57 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M634_03435 acea32ec53857cd1f2a9b550f9561b7b 459 SUPERFAMILY SSF52540 73 357 1.87E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_03435 acea32ec53857cd1f2a9b550f9561b7b 459 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site M634_22350 f55fca6d3bfc11022fc389992999787c 477 SUPERFAMILY SSF51905 9 295 1.45E-18 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_22350 f55fca6d3bfc11022fc389992999787c 477 Gene3D G3DSA:3.50.50.60 1 82 6.0E-9 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_22350 f55fca6d3bfc11022fc389992999787c 477 Pfam PF01266 FAD dependent oxidoreductase 12 377 1.3E-9 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 M634_17190 8c0d8a67e42fc04b30e066403fb3a0e7 284 Pfam PF00700 Bacterial flagellin C-terminal helical region 198 283 4.6E-29 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 M634_17190 8c0d8a67e42fc04b30e066403fb3a0e7 284 PRINTS PR00207 Flagellin signature 76 95 1.8E-20 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 M634_17190 8c0d8a67e42fc04b30e066403fb3a0e7 284 PRINTS PR00207 Flagellin signature 111 134 1.8E-20 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 M634_17190 8c0d8a67e42fc04b30e066403fb3a0e7 284 PRINTS PR00207 Flagellin signature 37 54 1.8E-20 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 M634_17190 8c0d8a67e42fc04b30e066403fb3a0e7 284 Gene3D G3DSA:1.20.58.1830 7 33 3.2E-62 T 12-10-2018 M634_17190 8c0d8a67e42fc04b30e066403fb3a0e7 284 Pfam PF00669 Bacterial flagellin N-terminal helical region 6 140 4.5E-45 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 M634_17190 8c0d8a67e42fc04b30e066403fb3a0e7 284 Gene3D G3DSA:1.10.8.410 232 284 1.2E-18 T 12-10-2018 M634_17190 8c0d8a67e42fc04b30e066403fb3a0e7 284 SUPERFAMILY SSF64518 1 284 2.88E-78 T 12-10-2018 M634_17190 8c0d8a67e42fc04b30e066403fb3a0e7 284 Gene3D G3DSA:1.20.1330.10 45 170 3.2E-62 T 12-10-2018 M634_17885 7d1911ff9220dcb2159d16f46d647bb4 139 Gene3D G3DSA:3.10.180.10 2 132 1.8E-19 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M634_17885 7d1911ff9220dcb2159d16f46d647bb4 139 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 104 2.5E-9 T 12-10-2018 M634_17885 7d1911ff9220dcb2159d16f46d647bb4 139 SUPERFAMILY SSF54593 3 130 7.65E-24 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M634_01525 218d0e8d32fa1845e49faf14ea5c2927 617 Gene3D G3DSA:3.40.1670.10 479 583 4.4E-25 T 12-10-2018 M634_01525 218d0e8d32fa1845e49faf14ea5c2927 617 Gene3D G3DSA:3.40.1670.10 337 453 2.3E-46 T 12-10-2018 M634_01525 218d0e8d32fa1845e49faf14ea5c2927 617 SUPERFAMILY SSF143968 323 466 3.4E-53 T 12-10-2018 M634_01525 218d0e8d32fa1845e49faf14ea5c2927 617 Gene3D G3DSA:1.20.5.570 584 617 1.3E-15 T 12-10-2018 M634_01525 218d0e8d32fa1845e49faf14ea5c2927 617 SUPERFAMILY SSF50475 3 322 2.2E-122 T 12-10-2018 M634_01525 218d0e8d32fa1845e49faf14ea5c2927 617 SUPERFAMILY SSF143968 475 615 9.55E-36 T 12-10-2018 M634_01525 218d0e8d32fa1845e49faf14ea5c2927 617 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 454 1.3E-165 T 12-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 M634_01525 218d0e8d32fa1845e49faf14ea5c2927 617 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 431 1.7E-162 T 12-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 M634_01525 218d0e8d32fa1845e49faf14ea5c2927 617 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 476 568 7.7E-21 T 12-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 M634_01420 0fc0c519ccaf820a67ae1ff0fc5d6f89 242 Gene3D G3DSA:3.40.50.1000 15 235 6.7E-59 T 12-10-2018 IPR023214 HAD superfamily M634_01420 0fc0c519ccaf820a67ae1ff0fc5d6f89 242 Pfam PF13419 Haloacid dehalogenase-like hydrolase 19 210 2.2E-10 T 12-10-2018 M634_01420 0fc0c519ccaf820a67ae1ff0fc5d6f89 242 SUPERFAMILY SSF56784 13 242 9.37E-40 T 12-10-2018 IPR036412 HAD-like superfamily M634_01420 0fc0c519ccaf820a67ae1ff0fc5d6f89 242 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 123 205 7.0E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M634_01420 0fc0c519ccaf820a67ae1ff0fc5d6f89 242 Gene3D G3DSA:1.20.120.1600 28 114 6.7E-59 T 12-10-2018 M634_03965 62a508bf28b5f87b419d385ff7d5ca83 203 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 2 194 4.2E-73 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 M634_03965 62a508bf28b5f87b419d385ff7d5ca83 203 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 18.805 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 M634_03965 62a508bf28b5f87b419d385ff7d5ca83 203 Pfam PF02660 Glycerol-3-phosphate acyltransferase 12 184 7.5E-50 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 M634_03965 62a508bf28b5f87b419d385ff7d5ca83 203 SMART SM01207 10 185 3.9E-83 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 M634_03230 8192b81505dd738e7264472a801d9a90 170 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 47.96 T 12-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 M634_03230 8192b81505dd738e7264472a801d9a90 170 Gene3D G3DSA:3.50.30.40 1 161 3.7E-61 T 12-10-2018 M634_03230 8192b81505dd738e7264472a801d9a90 170 SUPERFAMILY SSF89562 2 158 2.75E-47 T 12-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily M634_03230 8192b81505dd738e7264472a801d9a90 170 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 160 9.3E-83 T 12-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 M634_03230 8192b81505dd738e7264472a801d9a90 170 Pfam PF03737 Aldolase/RraA 6 152 2.2E-39 T 12-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein M634_03230 8192b81505dd738e7264472a801d9a90 170 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 1.5E-68 T 12-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 M634_15040 73a97641593688f93041ce8f04c04469 182 Gene3D G3DSA:2.30.30.240 101 182 7.4E-31 T 12-10-2018 M634_15040 73a97641593688f93041ce8f04c04469 182 SUPERFAMILY SSF50346 106 182 1.02E-19 T 12-10-2018 IPR011033 PRC-barrel-like superfamily M634_15040 73a97641593688f93041ce8f04c04469 182 Pfam PF01782 RimM N-terminal domain 15 95 7.6E-25 T 12-10-2018 IPR002676 RimM, N-terminal GO:0006364 M634_15040 73a97641593688f93041ce8f04c04469 182 Gene3D G3DSA:2.40.30.60 4 100 6.4E-33 T 12-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 M634_15040 73a97641593688f93041ce8f04c04469 182 SUPERFAMILY SSF50447 13 100 9.18E-24 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily M634_15040 73a97641593688f93041ce8f04c04469 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 13 182 23.604 T 12-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 M634_15040 73a97641593688f93041ce8f04c04469 182 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 14 182 7.3E-55 T 12-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 M634_15040 73a97641593688f93041ce8f04c04469 182 Pfam PF05239 PRC-barrel domain 103 168 6.1E-11 T 12-10-2018 IPR027275 PRC-barrel domain M634_06050 7f9bfb4f0ce261f562166361c3d20af6 368 Pfam PF01270 Glycosyl hydrolases family 8 18 347 1.1E-63 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 M634_06050 7f9bfb4f0ce261f562166361c3d20af6 368 Gene3D G3DSA:1.50.10.10 20 363 2.5E-116 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 M634_06050 7f9bfb4f0ce261f562166361c3d20af6 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 111 129 1.8E-14 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 M634_06050 7f9bfb4f0ce261f562166361c3d20af6 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 238 247 1.8E-14 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 M634_06050 7f9bfb4f0ce261f562166361c3d20af6 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 214 225 1.8E-14 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 M634_06050 7f9bfb4f0ce261f562166361c3d20af6 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 334 348 1.8E-14 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 M634_06050 7f9bfb4f0ce261f562166361c3d20af6 368 PRINTS PR00735 Glycosyl hydrolase family 8 signature 49 62 1.8E-14 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 M634_06050 7f9bfb4f0ce261f562166361c3d20af6 368 SUPERFAMILY SSF48208 4 353 5.56E-95 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 M634_08445 36d3c3e6291444bfae82363534e40629 204 SUPERFAMILY SSF53254 1 189 3.64E-38 T 12-10-2018 IPR029033 Histidine phosphatase superfamily M634_08445 36d3c3e6291444bfae82363534e40629 204 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 186 3.9E-40 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 M634_08445 36d3c3e6291444bfae82363534e40629 204 SMART SM00855 5 154 4.3E-10 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 M634_08445 36d3c3e6291444bfae82363534e40629 204 TIGRFAM TIGR03162 ribazole_cobC: alpha-ribazole phosphatase 6 182 1.5E-54 T 12-10-2018 IPR017578 Alpha-ribazole phosphatase, CobC GO:0009236|GO:0043755 KEGG: 00860+3.1.3.73|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 M634_08445 36d3c3e6291444bfae82363534e40629 204 PIRSF PIRSF000709 2 180 8.3E-4 T 12-10-2018 M634_08445 36d3c3e6291444bfae82363534e40629 204 Gene3D G3DSA:3.40.50.1240 1 204 1.9E-63 T 12-10-2018 IPR029033 Histidine phosphatase superfamily M634_07450 f1090bfa5d81a2a4d8b07c8be9330f81 1028 Pfam PF01580 FtsK/SpoIIIE family 643 856 2.7E-70 T 12-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 M634_07450 f1090bfa5d81a2a4d8b07c8be9330f81 1028 SUPERFAMILY SSF52540 617 929 3.32E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_07450 f1090bfa5d81a2a4d8b07c8be9330f81 1028 Pfam PF09397 Ftsk gamma domain 962 1022 7.8E-26 T 12-10-2018 IPR018541 FtsK gamma domain M634_07450 f1090bfa5d81a2a4d8b07c8be9330f81 1028 Gene3D G3DSA:3.30.980.40 535 639 3.7E-33 T 12-10-2018 M634_07450 f1090bfa5d81a2a4d8b07c8be9330f81 1028 Gene3D G3DSA:1.10.10.10 954 1021 2.3E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_07450 f1090bfa5d81a2a4d8b07c8be9330f81 1028 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 29 199 2.7E-41 T 12-10-2018 IPR025199 DNA translocase FtsK, 4TM region M634_07450 f1090bfa5d81a2a4d8b07c8be9330f81 1028 Gene3D G3DSA:3.40.50.300 640 942 2.0E-120 T 12-10-2018 M634_07450 f1090bfa5d81a2a4d8b07c8be9330f81 1028 SUPERFAMILY SSF46785 960 1025 4.15E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_07450 f1090bfa5d81a2a4d8b07c8be9330f81 1028 SMART SM00843 960 1025 6.8E-38 T 12-10-2018 IPR018541 FtsK gamma domain M634_09485 a4abe8bb68a25ec83a228c82b8560f7f 172 SUPERFAMILY SSF54637 4 169 5.47E-57 T 12-10-2018 IPR029069 HotDog domain superfamily M634_09485 a4abe8bb68a25ec83a228c82b8560f7f 172 Gene3D G3DSA:3.10.129.10 2 172 8.8E-66 T 12-10-2018 M634_09485 a4abe8bb68a25ec83a228c82b8560f7f 172 Pfam PF07977 FabA-like domain 29 158 3.0E-54 T 12-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 M634_09485 a4abe8bb68a25ec83a228c82b8560f7f 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 5.3E-92 T 12-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 M634_09485 a4abe8bb68a25ec83a228c82b8560f7f 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 51.377 T 12-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 M634_02730 ea27fb9f683cc1d154213bcdc72ff52d 194 Pfam PF01106 NifU-like domain 113 180 8.7E-19 T 12-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 M634_02730 ea27fb9f683cc1d154213bcdc72ff52d 194 Gene3D G3DSA:3.30.300.130 103 191 9.6E-19 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily M634_02730 ea27fb9f683cc1d154213bcdc72ff52d 194 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 4 194 2.3E-95 T 12-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 M634_02730 ea27fb9f683cc1d154213bcdc72ff52d 194 SUPERFAMILY SSF89360 3 99 4.71E-22 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 M634_02730 ea27fb9f683cc1d154213bcdc72ff52d 194 Pfam PF01521 Iron-sulphur cluster biosynthesis 3 100 5.9E-13 T 12-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 M634_02730 ea27fb9f683cc1d154213bcdc72ff52d 194 SUPERFAMILY SSF117916 97 187 3.27E-22 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily M634_02730 ea27fb9f683cc1d154213bcdc72ff52d 194 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 121 180 1.0E-27 T 12-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 M634_02730 ea27fb9f683cc1d154213bcdc72ff52d 194 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 3 194 44.291 T 12-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 M634_02730 ea27fb9f683cc1d154213bcdc72ff52d 194 Gene3D G3DSA:2.60.300.12 2 100 3.1E-14 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 M634_11275 be31ce25d334b65b6e4436db979cb70b 179 SUPERFAMILY SSF111126 1 176 7.85E-51 T 12-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily M634_11275 be31ce25d334b65b6e4436db979cb70b 179 Pfam PF07700 Haem-NO-binding 2 161 1.2E-37 T 12-10-2018 IPR011644 Heme NO-binding GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 M634_11275 be31ce25d334b65b6e4436db979cb70b 179 Gene3D G3DSA:3.90.1520.10 1 178 3.4E-56 T 12-10-2018 IPR038158 H-NOX domain superfamily GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 M634_05400 51351f13cb21750d0fc12b49c1468377 250 SUPERFAMILY SSF54060 33 240 3.88E-71 T 12-10-2018 M634_05400 51351f13cb21750d0fc12b49c1468377 250 Pfam PF01223 DNA/RNA non-specific endonuclease 24 231 1.9E-58 T 12-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 M634_05400 51351f13cb21750d0fc12b49c1468377 250 ProSitePatterns PS01070 DNA/RNA non-specific endonucleases active site. 100 108 - T 12-10-2018 IPR018524 DNA/RNA non-specific endonuclease, active site GO:0003676|GO:0016787|GO:0046872 M634_05400 51351f13cb21750d0fc12b49c1468377 250 SMART SM00892 40 232 6.7E-65 T 12-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 M634_05400 51351f13cb21750d0fc12b49c1468377 250 SMART SM00477 41 232 1.2E-65 T 12-10-2018 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 M634_05400 51351f13cb21750d0fc12b49c1468377 250 Gene3D G3DSA:3.40.570.10 20 245 3.3E-75 T 12-10-2018 M634_18305 add4759b897cf759649bfed6932059bb 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 2 27 1.2E-20 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M634_18305 add4759b897cf759649bfed6932059bb 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 389 416 1.2E-20 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M634_18305 add4759b897cf759649bfed6932059bb 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 418 447 1.2E-20 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M634_18305 add4759b897cf759649bfed6932059bb 553 Gene3D G3DSA:1.10.287.950 221 553 1.3E-72 T 12-10-2018 M634_18305 add4759b897cf759649bfed6932059bb 553 SMART SM00304 222 276 2.1E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_18305 add4759b897cf759649bfed6932059bb 553 SUPERFAMILY SSF58104 244 553 4.32E-75 T 12-10-2018 M634_18305 add4759b897cf759649bfed6932059bb 553 Gene3D G3DSA:3.30.450.20 28 201 2.0E-34 T 12-10-2018 M634_18305 add4759b897cf759649bfed6932059bb 553 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 336 518 8.9E-42 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_18305 add4759b897cf759649bfed6932059bb 553 SMART SM00283 291 552 2.6E-75 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_18305 add4759b897cf759649bfed6932059bb 553 Pfam PF17200 Single Cache domain 2 48 188 1.2E-30 T 12-10-2018 IPR033480 Single Cache domain 2 M634_18305 add4759b897cf759649bfed6932059bb 553 SMART SM01049 44 130 3.7E-20 T 12-10-2018 IPR033480 Single Cache domain 2 M634_07470 1450a6b820ebc5acdf1cf2ef4ef6714e 299 Pfam PF11860 N-acetylmuramidase 126 292 2.0E-63 T 12-10-2018 IPR024408 N-acetylmuramidase M634_03055 223607301141289cb2b2a676d370ef81 352 Gene3D G3DSA:3.40.50.2000 2 150 1.3E-52 T 12-10-2018 M634_03055 223607301141289cb2b2a676d370ef81 352 SUPERFAMILY SSF53756 2 344 2.35E-96 T 12-10-2018 M634_03055 223607301141289cb2b2a676d370ef81 352 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 3 345 1.0E-148 T 12-10-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 M634_03055 223607301141289cb2b2a676d370ef81 352 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 70 326 3.6E-70 T 12-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 M634_03055 223607301141289cb2b2a676d370ef81 352 Gene3D G3DSA:3.40.50.2000 165 347 2.6E-60 T 12-10-2018 M634_15405 214333aac87f1e38592f9526aa0565e3 288 SUPERFAMILY SSF82689 187 284 4.18E-34 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 M634_15405 214333aac87f1e38592f9526aa0565e3 288 Pfam PF00924 Mechanosensitive ion channel 77 274 1.8E-58 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 M634_15405 214333aac87f1e38592f9526aa0565e3 288 SUPERFAMILY SSF50182 120 185 4.58E-18 T 12-10-2018 IPR010920 LSM domain superfamily M634_15405 214333aac87f1e38592f9526aa0565e3 288 Pfam PF05552 Conserved TM helix 21 69 7.7E-13 T 12-10-2018 IPR008910 Conserved TM helix M634_15405 214333aac87f1e38592f9526aa0565e3 288 Gene3D G3DSA:2.30.30.60 135 184 5.2E-23 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily M634_15405 214333aac87f1e38592f9526aa0565e3 288 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 149 183 - T 12-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 M634_15405 214333aac87f1e38592f9526aa0565e3 288 SUPERFAMILY SSF82861 33 118 1.31E-17 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 M634_15405 214333aac87f1e38592f9526aa0565e3 288 Gene3D G3DSA:3.30.70.100 185 279 6.1E-28 T 12-10-2018 M634_21330 de9b49fa5ea31eb49782b3e4602cf475 111 Gene3D G3DSA:2.40.50.200 10 111 1.9E-33 T 12-10-2018 IPR036700 Bacterial OB-fold superfamily M634_21330 de9b49fa5ea31eb49782b3e4602cf475 111 SUPERFAMILY SSF101756 7 111 6.8E-33 T 12-10-2018 IPR036700 Bacterial OB-fold superfamily M634_21330 de9b49fa5ea31eb49782b3e4602cf475 111 Pfam PF04076 Bacterial OB fold (BOF) protein 19 110 9.5E-27 T 12-10-2018 IPR005220 Bacterial OB-fold M634_19470 069062a4ef8189797fb7bb39fba55af1 145 Gene3D G3DSA:1.20.58.300 6 137 2.2E-22 T 12-10-2018 M634_19470 069062a4ef8189797fb7bb39fba55af1 145 SUPERFAMILY SSF140566 9 136 1.7E-29 T 12-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 M634_19470 069062a4ef8189797fb7bb39fba55af1 145 Pfam PF05130 FlgN protein 8 134 4.0E-17 T 12-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 M634_24570 fa332873f3c747468330054ca9302d81 100 SUPERFAMILY SSF54111 2 99 1.7E-45 T 12-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 M634_24570 fa332873f3c747468330054ca9302d81 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 2 99 3.0E-51 T 12-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 M634_24570 fa332873f3c747468330054ca9302d81 100 Gene3D G3DSA:3.30.280.10 4 100 1.5E-47 T 12-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 M634_24570 fa332873f3c747468330054ca9302d81 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 2.0E-47 T 12-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 M634_24570 fa332873f3c747468330054ca9302d81 100 Pfam PF00547 Urease, gamma subunit 2 99 2.5E-46 T 12-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 M634_24570 fa332873f3c747468330054ca9302d81 100 PIRSF PIRSF001223 1 100 7.6E-50 T 12-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 M634_24570 fa332873f3c747468330054ca9302d81 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 34.577 T 12-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 M634_21670 13e0eabde3417577f39c4d391a4aaa13 111 Pfam PF01627 Hpt domain 23 96 1.1E-5 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 M634_21670 13e0eabde3417577f39c4d391a4aaa13 111 Gene3D G3DSA:1.20.120.160 3 111 9.8E-9 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 M634_21670 13e0eabde3417577f39c4d391a4aaa13 111 SUPERFAMILY SSF47226 4 109 2.22E-12 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 M634_21605 021f3ca341f614a794bbcbc0ce68d6ef 187 PRINTS PR01021 OMPA domain signature 116 131 5.4E-8 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M634_21605 021f3ca341f614a794bbcbc0ce68d6ef 187 PRINTS PR01021 OMPA domain signature 131 147 5.4E-8 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M634_21605 021f3ca341f614a794bbcbc0ce68d6ef 187 Gene3D G3DSA:3.30.1330.60 55 185 2.1E-21 T 12-10-2018 IPR036737 OmpA-like domain superfamily M634_21605 021f3ca341f614a794bbcbc0ce68d6ef 187 Pfam PF00691 OmpA family 88 174 3.4E-17 T 12-10-2018 IPR006665 OmpA-like domain M634_21605 021f3ca341f614a794bbcbc0ce68d6ef 187 SUPERFAMILY SSF103088 78 186 1.15E-20 T 12-10-2018 IPR036737 OmpA-like domain superfamily M634_09655 7311a258885d483262b41c7f3fcf891e 286 SUPERFAMILY SSF161098 10 275 2.49E-54 T 12-10-2018 IPR035906 MetI-like superfamily M634_09655 7311a258885d483262b41c7f3fcf891e 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 283 5.4E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_09655 7311a258885d483262b41c7f3fcf891e 286 Gene3D G3DSA:1.10.3720.10 7 278 4.1E-54 T 12-10-2018 IPR035906 MetI-like superfamily M634_06690 c7768c77785c814f726b9ba6c3c8b12a 624 SMART SM00563 456 570 3.0E-36 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 M634_06690 c7768c77785c814f726b9ba6c3c8b12a 624 SUPERFAMILY SSF103473 13 424 6.41E-26 T 12-10-2018 IPR036259 MFS transporter superfamily M634_06690 c7768c77785c814f726b9ba6c3c8b12a 624 Pfam PF01553 Acyltransferase 442 567 4.2E-25 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 M634_06690 c7768c77785c814f726b9ba6c3c8b12a 624 Gene3D G3DSA:1.20.1250.20 11 421 7.8E-26 T 12-10-2018 M634_06690 c7768c77785c814f726b9ba6c3c8b12a 624 SUPERFAMILY SSF69593 406 609 1.83E-30 T 12-10-2018 M634_06690 c7768c77785c814f726b9ba6c3c8b12a 624 Pfam PF07690 Major Facilitator Superfamily 43 312 2.5E-9 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M634_10345 161779cc733ba76395bc075842962da7 736 Pfam PF02368 Bacterial Ig-like domain (group 2) 98 164 1.9E-5 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 M634_10345 161779cc733ba76395bc075842962da7 736 Pfam PF02368 Bacterial Ig-like domain (group 2) 357 427 8.4E-8 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 M634_10345 161779cc733ba76395bc075842962da7 736 Pfam PF02368 Bacterial Ig-like domain (group 2) 444 518 4.0E-5 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 M634_10345 161779cc733ba76395bc075842962da7 736 Gene3D G3DSA:2.60.40.1080 269 354 1.2E-14 T 12-10-2018 M634_10345 161779cc733ba76395bc075842962da7 736 Gene3D G3DSA:2.60.40.1080 355 440 4.8E-14 T 12-10-2018 M634_10345 161779cc733ba76395bc075842962da7 736 Gene3D G3DSA:2.60.40.1080 95 181 1.4E-17 T 12-10-2018 M634_10345 161779cc733ba76395bc075842962da7 736 Gene3D G3DSA:2.60.40.1080 182 268 5.2E-14 T 12-10-2018 M634_10345 161779cc733ba76395bc075842962da7 736 SUPERFAMILY SSF49373 97 179 8.24E-7 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments M634_10345 161779cc733ba76395bc075842962da7 736 Gene3D G3DSA:2.60.40.1080 441 526 2.3E-17 T 12-10-2018 M634_10345 161779cc733ba76395bc075842962da7 736 SMART SM00635 183 264 0.59 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 M634_10345 161779cc733ba76395bc075842962da7 736 SMART SM00635 270 349 0.0028 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 M634_10345 161779cc733ba76395bc075842962da7 736 SMART SM00635 97 178 1.3E-7 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 M634_10345 161779cc733ba76395bc075842962da7 736 SMART SM00635 355 435 2.2E-11 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 M634_10345 161779cc733ba76395bc075842962da7 736 SMART SM00635 441 522 1.0E-6 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 M634_15955 0ed2ec3fec2de25ff5e5883ef02c1934 481 PIRSF PIRSF004919 14 481 7.1E-142 T 12-10-2018 IPR025502 TldD M634_15955 0ed2ec3fec2de25ff5e5883ef02c1934 481 SUPERFAMILY SSF111283 18 480 2.22E-128 T 12-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 M634_15955 0ed2ec3fec2de25ff5e5883ef02c1934 481 Gene3D G3DSA:3.30.2290.10 7 240 6.2E-16 T 12-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal M634_15955 0ed2ec3fec2de25ff5e5883ef02c1934 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 1.5E-65 T 12-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 M634_03415 bbfe30c3ee09742048ce61cca3e15e13 159 Pfam PF11075 Protein of unknown function VcgC/VcgE (DUF2780) 39 152 8.5E-29 T 12-10-2018 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE M634_12450 b8ba295ee66779ccb2b4281b8977636e 338 Gene3D G3DSA:3.30.160.60 73 110 5.7E-8 T 12-10-2018 M634_12450 b8ba295ee66779ccb2b4281b8977636e 338 Gene3D G3DSA:3.30.160.60 302 338 7.9E-18 T 12-10-2018 M634_12450 b8ba295ee66779ccb2b4281b8977636e 338 Pfam PF02618 YceG-like family 43 328 6.3E-83 T 12-10-2018 IPR003770 Endolytic murein transglycosylase M634_12450 b8ba295ee66779ccb2b4281b8977636e 338 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 5 336 33.508 T 12-10-2018 IPR003770 Endolytic murein transglycosylase M634_12450 b8ba295ee66779ccb2b4281b8977636e 338 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 5 336 1.3E-101 T 12-10-2018 IPR003770 Endolytic murein transglycosylase M634_22975 bed5342059471e54e044d1654a188ed2 228 Pfam PF00293 NUDIX domain 89 205 3.2E-16 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 M634_22975 bed5342059471e54e044d1654a188ed2 228 Gene3D G3DSA:3.90.79.10 55 224 1.5E-46 T 12-10-2018 M634_22975 bed5342059471e54e044d1654a188ed2 228 ProSitePatterns PS00893 Nudix box signature. 125 146 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 M634_22975 bed5342059471e54e044d1654a188ed2 228 SUPERFAMILY SSF55811 58 226 3.25E-44 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 M634_02960 ab8303fc069b3d8a965dadc678fd8141 269 SUPERFAMILY SSF46946 130 221 1.38E-27 T 12-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 M634_02960 ab8303fc069b3d8a965dadc678fd8141 269 SUPERFAMILY SSF81624 2 138 1.44E-41 T 12-10-2018 IPR035937 MutM-like, N-terminal M634_02960 ab8303fc069b3d8a965dadc678fd8141 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 1.8E-31 T 12-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 M634_02960 ab8303fc069b3d8a965dadc678fd8141 269 Gene3D G3DSA:1.10.8.50 131 269 1.6E-44 T 12-10-2018 M634_02960 ab8303fc069b3d8a965dadc678fd8141 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 1.5E-24 T 12-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 M634_02960 ab8303fc069b3d8a965dadc678fd8141 269 Gene3D G3DSA:3.20.190.10 2 128 1.5E-41 T 12-10-2018 IPR035937 MutM-like, N-terminal M634_02960 ab8303fc069b3d8a965dadc678fd8141 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 269 9.8E-9 T 12-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 M634_02960 ab8303fc069b3d8a965dadc678fd8141 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 42.605 T 12-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 M634_02960 ab8303fc069b3d8a965dadc678fd8141 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 6.6E-93 T 12-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 M634_02960 ab8303fc069b3d8a965dadc678fd8141 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 12-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 M634_02960 ab8303fc069b3d8a965dadc678fd8141 269 SMART SM01232 129 221 1.3E-41 T 12-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 M634_02960 ab8303fc069b3d8a965dadc678fd8141 269 SUPERFAMILY SSF57716 217 268 1.11E-16 T 12-10-2018 M634_02960 ab8303fc069b3d8a965dadc678fd8141 269 SMART SM00898 2 115 8.0E-55 T 12-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 M634_03215 cbf2435085a4bc0c7e64e1c8cf93e8c0 204 SUPERFAMILY SSF46785 5 183 1.27E-35 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_03215 cbf2435085a4bc0c7e64e1c8cf93e8c0 204 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 46 4.7E-6 T 12-10-2018 M634_03215 cbf2435085a4bc0c7e64e1c8cf93e8c0 204 Gene3D G3DSA:1.10.10.10 2 84 9.2E-10 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_02780 5cdf5bd9f081ee75c8f5d966b05460fe 470 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 24 451 9.8E-128 T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 M634_02780 5cdf5bd9f081ee75c8f5d966b05460fe 470 TIGRFAM TIGR03173 pbuX: xanthine permease 34 453 6.3E-132 T 12-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 M634_02780 5cdf5bd9f081ee75c8f5d966b05460fe 470 Pfam PF00860 Permease family 29 421 4.8E-99 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 M634_02780 5cdf5bd9f081ee75c8f5d966b05460fe 470 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 369 389 - T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 M634_15540 3e580b2f8c1dbeb253f5c3ee67494288 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 23 238 30.683 T 12-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 M634_15540 3e580b2f8c1dbeb253f5c3ee67494288 239 Pfam PF02390 Putative methyltransferase 62 232 2.5E-58 T 12-10-2018 M634_15540 3e580b2f8c1dbeb253f5c3ee67494288 239 Gene3D G3DSA:3.40.50.150 29 239 3.8E-70 T 12-10-2018 M634_15540 3e580b2f8c1dbeb253f5c3ee67494288 239 SUPERFAMILY SSF53335 16 238 2.39E-35 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_15540 3e580b2f8c1dbeb253f5c3ee67494288 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 47 238 7.4E-67 T 12-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 M634_22790 32664abf0a39ee13a85e7187ec162819 60 Pfam PF11661 Protein of unknown function (DUF2986) 1 43 4.4E-21 T 12-10-2018 IPR021677 Protein of unknown function DUF2986 M634_20550 8282280c0e8b5416fdcacde983a75adb 192 PIRSF PIRSF000013 1 192 8.0E-92 T 12-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 M634_20550 8282280c0e8b5416fdcacde983a75adb 192 Gene3D G3DSA:1.10.3820.10 10 188 2.3E-33 T 12-10-2018 IPR038266 NapC/NirT cytochrome c superfamily M634_20550 8282280c0e8b5416fdcacde983a75adb 192 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 15 185 3.1E-70 T 12-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal M634_20550 8282280c0e8b5416fdcacde983a75adb 192 SUPERFAMILY SSF48695 13 191 1.26E-55 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily M634_09625 c203788d58cd1df88901c6707696cd66 315 Pfam PF00582 Universal stress protein family 177 301 1.1E-15 T 12-10-2018 IPR006016 UspA M634_09625 c203788d58cd1df88901c6707696cd66 315 Pfam PF00582 Universal stress protein family 4 148 1.3E-14 T 12-10-2018 IPR006016 UspA M634_09625 c203788d58cd1df88901c6707696cd66 315 SUPERFAMILY SSF52402 4 158 4.02E-26 T 12-10-2018 M634_09625 c203788d58cd1df88901c6707696cd66 315 Gene3D G3DSA:3.40.50.12370 1 313 1.3E-113 T 12-10-2018 M634_09625 c203788d58cd1df88901c6707696cd66 315 SUPERFAMILY SSF52402 158 308 2.76E-24 T 12-10-2018 M634_10545 cb08b0d49c7352f3a9a0bffef9fcb6ef 82 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 11 77 1.0E-8 T 12-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM M634_10545 cb08b0d49c7352f3a9a0bffef9fcb6ef 82 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 12 61 3.6E-5 T 12-10-2018 M634_10545 cb08b0d49c7352f3a9a0bffef9fcb6ef 82 SUPERFAMILY SSF143120 12 68 2.35E-8 T 12-10-2018 IPR036165 YefM-like superfamily M634_11945 9152568fd65d5297958657e51fc8e9f4 185 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 180 8.6E-55 T 12-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 M634_11945 9152568fd65d5297958657e51fc8e9f4 185 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 M634_11945 9152568fd65d5297958657e51fc8e9f4 185 PIRSF PIRSF000847 1 184 4.0E-46 T 12-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 M634_11945 9152568fd65d5297958657e51fc8e9f4 185 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 1.4E-17 T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 M634_11945 9152568fd65d5297958657e51fc8e9f4 185 Gene3D G3DSA:1.20.120.1760 2 180 3.3E-17 T 12-10-2018 M634_10360 0dd17fff5091b9915fbf2840b78ce672 338 Pfam PF01368 DHH family 37 171 1.5E-12 T 12-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 M634_10360 0dd17fff5091b9915fbf2840b78ce672 338 Pfam PF02833 DHHA2 domain 210 334 2.8E-21 T 12-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 M634_10360 0dd17fff5091b9915fbf2840b78ce672 338 SMART SM01131 208 335 2.0E-41 T 12-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 M634_10360 0dd17fff5091b9915fbf2840b78ce672 338 Gene3D G3DSA:3.90.1640.10 33 216 1.8E-47 T 12-10-2018 M634_10360 0dd17fff5091b9915fbf2840b78ce672 338 SUPERFAMILY SSF64182 33 335 9.16E-55 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily M634_10360 0dd17fff5091b9915fbf2840b78ce672 338 Gene3D G3DSA:3.10.310.20 217 336 2.0E-33 T 12-10-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 M634_22185 e10b5912b7f13f555c9512119780456d 262 SMART SM00052 18 255 8.6E-11 T 12-10-2018 IPR001633 EAL domain M634_22185 e10b5912b7f13f555c9512119780456d 262 Gene3D G3DSA:3.20.20.450 16 252 1.8E-41 T 12-10-2018 IPR035919 EAL domain superfamily M634_22185 e10b5912b7f13f555c9512119780456d 262 SUPERFAMILY SSF141868 28 257 6.28E-42 T 12-10-2018 IPR035919 EAL domain superfamily M634_22185 e10b5912b7f13f555c9512119780456d 262 Pfam PF00563 EAL domain 27 250 6.3E-41 T 12-10-2018 IPR001633 EAL domain M634_21800 88975690446c2ab017e29654bf13d643 616 Pfam PF01757 Acyltransferase family 5 318 2.7E-28 T 12-10-2018 IPR002656 Acyltransferase 3 GO:0016747 M634_21800 88975690446c2ab017e29654bf13d643 616 SUPERFAMILY SSF52266 401 599 1.65E-5 T 12-10-2018 M634_07280 f5cbf06df87fbad2e97791d169635a96 147 Gene3D G3DSA:3.30.420.270 63 136 8.6E-17 T 12-10-2018 M634_07280 f5cbf06df87fbad2e97791d169635a96 147 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 144 1.1E-24 T 12-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 M634_07280 f5cbf06df87fbad2e97791d169635a96 147 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 5 144 28.269 T 12-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 M634_03660 5b85aac706a389ac7ecb564daf975a52 269 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 12-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 M634_03660 5b85aac706a389ac7ecb564daf975a52 269 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 264 55.427 T 12-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 M634_03660 5b85aac706a389ac7ecb564daf975a52 269 Gene3D G3DSA:1.10.8.100 200 267 1.8E-24 T 12-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 M634_03660 5b85aac706a389ac7ecb564daf975a52 269 Gene3D G3DSA:3.40.50.150 1 198 1.7E-65 T 12-10-2018 M634_03660 5b85aac706a389ac7ecb564daf975a52 269 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 264 3.1E-77 T 12-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm M634_03660 5b85aac706a389ac7ecb564daf975a52 269 SMART SM00650 25 197 4.9E-89 T 12-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 M634_03660 5b85aac706a389ac7ecb564daf975a52 269 SUPERFAMILY SSF53335 8 267 8.92E-80 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_03660 5b85aac706a389ac7ecb564daf975a52 269 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 10 263 5.4E-88 T 12-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 M634_06345 866b0eab9db3d95ce4077048e2c7bfe8 185 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 9 155 4.9E-36 T 12-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 M634_06345 866b0eab9db3d95ce4077048e2c7bfe8 185 PIRSF PIRSF004982 2 185 1.7E-62 T 12-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 M634_06345 866b0eab9db3d95ce4077048e2c7bfe8 185 Pfam PF03843 Outer membrane lipoprotein Slp family 17 163 6.0E-45 T 12-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 M634_02470 37580198489ed96bc38822dc2eb8feac 302 SUPERFAMILY SSF103481 65 144 1.22E-11 T 12-10-2018 M634_02470 37580198489ed96bc38822dc2eb8feac 302 SUPERFAMILY SSF103481 189 289 4.45E-10 T 12-10-2018 M634_02470 37580198489ed96bc38822dc2eb8feac 302 Pfam PF00892 EamA-like transporter family 9 141 1.7E-16 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M634_02470 37580198489ed96bc38822dc2eb8feac 302 Pfam PF00892 EamA-like transporter family 155 286 8.9E-17 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M634_08460 5b874d596d43eb2c28d098a55ea3d149 342 Gene3D G3DSA:3.40.630.10 1 342 3.0E-123 T 12-10-2018 M634_08460 5b874d596d43eb2c28d098a55ea3d149 342 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 53 330 2.6E-70 T 12-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 M634_08460 5b874d596d43eb2c28d098a55ea3d149 342 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 342 135.194 T 12-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 M634_08460 5b874d596d43eb2c28d098a55ea3d149 342 SUPERFAMILY SSF53187 9 329 1.62E-77 T 12-10-2018 M634_08460 5b874d596d43eb2c28d098a55ea3d149 342 PIRSF PIRSF017020 4 336 3.3E-127 T 12-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 M634_11765 c2627d509c04f8e77a686c2b798c6bfa 362 PIRSF PIRSF039026 4 362 1.1E-142 T 12-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like M634_11765 c2627d509c04f8e77a686c2b798c6bfa 362 Gene3D G3DSA:3.40.190.10 156 327 1.1E-117 T 12-10-2018 M634_11765 c2627d509c04f8e77a686c2b798c6bfa 362 Gene3D G3DSA:3.40.190.170 38 348 1.1E-117 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily M634_11765 c2627d509c04f8e77a686c2b798c6bfa 362 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 40 327 7.5E-69 T 12-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 M634_24665 92bee8b2df15cb48f56eaf9264739cdf 262 SMART SM00862 25 100 8.4E-10 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_24665 92bee8b2df15cb48f56eaf9264739cdf 262 SUPERFAMILY SSF46894 8 100 3.68E-14 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M634_24665 92bee8b2df15cb48f56eaf9264739cdf 262 Gene3D G3DSA:1.10.10.10 1 107 1.1E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_24665 92bee8b2df15cb48f56eaf9264739cdf 262 Pfam PF00486 Transcriptional regulatory protein, C terminal 31 100 3.4E-12 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_14100 1d8a74717358fc997ff4e497b8fe4454 354 Gene3D G3DSA:2.30.40.20 15 72 1.3E-26 T 12-10-2018 M634_14100 1d8a74717358fc997ff4e497b8fe4454 354 Hamap MF_01113 DNA polymerase IV [dinB]. 5 353 36.69 T 12-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 M634_14100 1d8a74717358fc997ff4e497b8fe4454 354 SUPERFAMILY SSF100879 245 353 1.06E-24 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 M634_14100 1d8a74717358fc997ff4e497b8fe4454 354 Pfam PF00817 impB/mucB/samB family 11 158 1.3E-47 T 12-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 M634_14100 1d8a74717358fc997ff4e497b8fe4454 354 Pfam PF11799 impB/mucB/samB family C-terminal domain 241 341 5.0E-6 T 12-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 M634_14100 1d8a74717358fc997ff4e497b8fe4454 354 Pfam PF11798 IMS family HHH motif 170 200 7.9E-6 T 12-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 M634_14100 1d8a74717358fc997ff4e497b8fe4454 354 SUPERFAMILY SSF56672 4 238 3.65E-92 T 12-10-2018 M634_14100 1d8a74717358fc997ff4e497b8fe4454 354 Gene3D G3DSA:3.30.70.270 73 173 9.5E-38 T 12-10-2018 M634_14100 1d8a74717358fc997ff4e497b8fe4454 354 Gene3D G3DSA:3.30.1490.100 241 353 2.7E-26 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 M634_14100 1d8a74717358fc997ff4e497b8fe4454 354 Gene3D G3DSA:1.10.150.20 174 232 1.9E-15 T 12-10-2018 M634_00670 651fad5bf6ba04f07a48b53eafbff7ba 144 SMART SM00450 40 138 1.6E-20 T 12-10-2018 IPR001763 Rhodanese-like domain M634_00670 651fad5bf6ba04f07a48b53eafbff7ba 144 SUPERFAMILY SSF52821 15 143 2.1E-30 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M634_00670 651fad5bf6ba04f07a48b53eafbff7ba 144 Gene3D G3DSA:3.40.250.10 22 143 1.7E-24 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M634_00670 651fad5bf6ba04f07a48b53eafbff7ba 144 Pfam PF00581 Rhodanese-like domain 44 135 7.6E-17 T 12-10-2018 IPR001763 Rhodanese-like domain M634_01825 81864a2af446d479dd2b4431ecb5c085 366 SUPERFAMILY SSF55979 126 244 1.74E-28 T 12-10-2018 M634_01825 81864a2af446d479dd2b4431ecb5c085 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 1.4E-38 T 12-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 M634_01825 81864a2af446d479dd2b4431ecb5c085 366 SMART SM00480 17 362 5.5E-151 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 M634_01825 81864a2af446d479dd2b4431ecb5c085 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 243 1.1E-35 T 12-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 M634_01825 81864a2af446d479dd2b4431ecb5c085 366 Gene3D G3DSA:3.10.150.10 124 247 4.5E-36 T 12-10-2018 M634_01825 81864a2af446d479dd2b4431ecb5c085 366 PIRSF PIRSF000804 1 366 3.9E-118 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 M634_01825 81864a2af446d479dd2b4431ecb5c085 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 2.0E-38 T 12-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 M634_01825 81864a2af446d479dd2b4431ecb5c085 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 6.4E-109 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 M634_01825 81864a2af446d479dd2b4431ecb5c085 366 SUPERFAMILY SSF55979 245 366 2.06E-36 T 12-10-2018 M634_01825 81864a2af446d479dd2b4431ecb5c085 366 Gene3D G3DSA:3.10.150.10 1 122 2.6E-42 T 12-10-2018 M634_01825 81864a2af446d479dd2b4431ecb5c085 366 Gene3D G3DSA:3.10.150.10 248 366 3.4E-39 T 12-10-2018 M634_01825 81864a2af446d479dd2b4431ecb5c085 366 SUPERFAMILY SSF55979 1 118 2.54E-30 T 12-10-2018 M634_05985 3bfea71a02ff9a26bff4eb2044923c8c 316 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 3 308 7.7E-87 T 12-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 M634_05985 3bfea71a02ff9a26bff4eb2044923c8c 316 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 180 307 1.7E-45 T 12-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 M634_05985 3bfea71a02ff9a26bff4eb2044923c8c 316 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 181 316 3.0E-77 T 12-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 M634_05985 3bfea71a02ff9a26bff4eb2044923c8c 316 Hamap MF_00509 Cell division protein ZipA [zipA]. 2 310 22.594 T 12-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 M634_05985 3bfea71a02ff9a26bff4eb2044923c8c 316 SUPERFAMILY SSF64383 180 312 1.96E-48 T 12-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 M634_05985 3bfea71a02ff9a26bff4eb2044923c8c 316 Gene3D G3DSA:3.30.1400.10 177 316 7.2E-49 T 12-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 M634_05985 3bfea71a02ff9a26bff4eb2044923c8c 316 SMART SM00771 178 308 5.1E-72 T 12-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 M634_04180 dea8a802f95fb4a76145d5351ed32d78 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M634_04180 dea8a802f95fb4a76145d5351ed32d78 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 7.3E-157 T 12-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M634_04180 dea8a802f95fb4a76145d5351ed32d78 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 9.3E-6 T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M634_04180 dea8a802f95fb4a76145d5351ed32d78 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M634_04180 dea8a802f95fb4a76145d5351ed32d78 360 Pfam PF00953 Glycosyl transferase family 4 99 283 2.4E-37 T 12-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 M634_04180 dea8a802f95fb4a76145d5351ed32d78 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.429 T 12-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M634_07140 7a371427c76d7e8441938a3d2ff908b2 196 Pfam PF04993 TfoX N-terminal domain 12 103 2.3E-30 T 12-10-2018 IPR007076 TfoX, N-terminal M634_07140 7a371427c76d7e8441938a3d2ff908b2 196 SUPERFAMILY SSF159894 5 103 8.37E-31 T 12-10-2018 M634_07140 7a371427c76d7e8441938a3d2ff908b2 196 Gene3D G3DSA:3.30.1460.30 1 105 9.4E-39 T 12-10-2018 M634_07140 7a371427c76d7e8441938a3d2ff908b2 196 Pfam PF04994 TfoX C-terminal domain 115 193 4.3E-31 T 12-10-2018 IPR007077 TfoX, C-terminal M634_07140 7a371427c76d7e8441938a3d2ff908b2 196 PIRSF PIRSF028788 1 196 5.7E-48 T 12-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type M634_07140 7a371427c76d7e8441938a3d2ff908b2 196 Gene3D G3DSA:1.10.150.20 114 195 4.2E-22 T 12-10-2018 M634_09695 7c54b92c0cdcee56a9c5298dd3ca6cfe 427 SUPERFAMILY SSF111352 38 405 3.14E-95 T 12-10-2018 M634_09695 7c54b92c0cdcee56a9c5298dd3ca6cfe 427 Pfam PF00909 Ammonium Transporter Family 44 420 6.8E-87 T 12-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 M634_09695 7c54b92c0cdcee56a9c5298dd3ca6cfe 427 Gene3D G3DSA:1.10.3430.10 17 427 9.2E-102 T 12-10-2018 IPR029020 Ammonium/urea transporter M634_20960 7d10d563d27913572c41339cb1f835f1 298 SUPERFAMILY SSF48179 163 295 3.74E-40 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 M634_20960 7d10d563d27913572c41339cb1f835f1 298 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 291 5.0E-32 T 12-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 M634_20960 7d10d563d27913572c41339cb1f835f1 298 SUPERFAMILY SSF51735 3 163 6.08E-47 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_20960 7d10d563d27913572c41339cb1f835f1 298 Gene3D G3DSA:3.40.50.720 1 164 1.2E-58 T 12-10-2018 M634_20960 7d10d563d27913572c41339cb1f835f1 298 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 12-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 M634_20960 7d10d563d27913572c41339cb1f835f1 298 Gene3D G3DSA:1.10.1040.10 165 298 3.3E-44 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 M634_20960 7d10d563d27913572c41339cb1f835f1 298 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 292 1.7E-131 T 12-10-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 M634_20960 7d10d563d27913572c41339cb1f835f1 298 PIRSF PIRSF000103 1 298 1.4E-84 T 12-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 M634_20960 7d10d563d27913572c41339cb1f835f1 298 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 162 8.1E-53 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 M634_06860 4cf547d14b7be7eef3b2a62e9dc1a44a 293 TIGRFAM TIGR02721 ycfN_thiK: thiamine kinase 30 284 1.3E-106 T 12-10-2018 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896 M634_06860 4cf547d14b7be7eef3b2a62e9dc1a44a 293 Gene3D G3DSA:3.90.1200.10 103 283 2.5E-15 T 12-10-2018 M634_06860 4cf547d14b7be7eef3b2a62e9dc1a44a 293 Pfam PF01633 Choline/ethanolamine kinase 66 215 4.4E-12 T 12-10-2018 M634_06860 4cf547d14b7be7eef3b2a62e9dc1a44a 293 SUPERFAMILY SSF56112 25 273 8.6E-42 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily M634_18815 0a8fe33dc17a4b9e1991294318c6001d 331 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site M634_18815 0a8fe33dc17a4b9e1991294318c6001d 331 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 195 217 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site M634_18815 0a8fe33dc17a4b9e1991294318c6001d 331 Gene3D G3DSA:3.40.50.720 103 298 9.5E-133 T 12-10-2018 M634_18815 0a8fe33dc17a4b9e1991294318c6001d 331 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 327 1.4E-34 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 M634_18815 0a8fe33dc17a4b9e1991294318c6001d 331 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 175 - T 12-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 M634_18815 0a8fe33dc17a4b9e1991294318c6001d 331 Gene3D G3DSA:3.40.50.720 4 318 9.5E-133 T 12-10-2018 M634_18815 0a8fe33dc17a4b9e1991294318c6001d 331 SUPERFAMILY SSF51735 103 299 2.85E-53 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_18815 0a8fe33dc17a4b9e1991294318c6001d 331 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 298 2.8E-50 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 M634_18815 0a8fe33dc17a4b9e1991294318c6001d 331 SUPERFAMILY SSF52283 1 136 8.29E-42 T 12-10-2018 M634_09290 3089808815522131ea5bd29d1bceb167 206 SUPERFAMILY SSF103647 23 71 1.12E-9 T 12-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 M634_09290 3089808815522131ea5bd29d1bceb167 206 PRINTS PR01021 OMPA domain signature 84 106 1.7E-7 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M634_09290 3089808815522131ea5bd29d1bceb167 206 PRINTS PR01021 OMPA domain signature 114 129 1.7E-7 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M634_09290 3089808815522131ea5bd29d1bceb167 206 PRINTS PR01021 OMPA domain signature 129 145 1.7E-7 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M634_09290 3089808815522131ea5bd29d1bceb167 206 Pfam PF00691 OmpA family 83 178 5.7E-19 T 12-10-2018 IPR006665 OmpA-like domain M634_09290 3089808815522131ea5bd29d1bceb167 206 Gene3D G3DSA:3.30.1330.60 57 190 1.0E-28 T 12-10-2018 IPR036737 OmpA-like domain superfamily M634_09290 3089808815522131ea5bd29d1bceb167 206 SUPERFAMILY SSF103088 56 182 2.35E-29 T 12-10-2018 IPR036737 OmpA-like domain superfamily M634_20720 047fb0ea5628564e9710b8168da79659 412 Pfam PF01566 Natural resistance-associated macrophage protein 55 379 6.7E-19 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 M634_01400 5e97f747e981cd740dd9e156628a0b9f 156 Pfam PF01878 EVE domain 2 147 5.0E-57 T 12-10-2018 IPR002740 EVE domain M634_01400 5e97f747e981cd740dd9e156628a0b9f 156 SUPERFAMILY SSF88697 1 149 1.7E-63 T 12-10-2018 IPR015947 PUA-like superfamily M634_01400 5e97f747e981cd740dd9e156628a0b9f 156 Gene3D G3DSA:3.10.590.10 1 153 1.6E-66 T 12-10-2018 M634_09945 855f00474e785adc23e3b8ca50b2f07b 456 PIRSF PIRSF006603 5 452 1.9E-65 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M634_09945 855f00474e785adc23e3b8ca50b2f07b 456 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 421 1.6E-125 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M634_09945 855f00474e785adc23e3b8ca50b2f07b 456 Pfam PF01554 MatE 243 404 8.1E-39 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M634_09945 855f00474e785adc23e3b8ca50b2f07b 456 Pfam PF01554 MatE 17 176 4.6E-37 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M634_14325 3f05f3e41c070667fbd4a6583b060b7a 519 Pfam PF01266 FAD dependent oxidoreductase 17 335 1.5E-48 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 M634_14325 3f05f3e41c070667fbd4a6583b060b7a 519 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 393 501 3.4E-12 T 12-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 M634_14325 3f05f3e41c070667fbd4a6583b060b7a 519 SUPERFAMILY SSF51905 17 385 1.04E-30 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_14325 3f05f3e41c070667fbd4a6583b060b7a 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 325 331 3.8E-29 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 M634_14325 3f05f3e41c070667fbd4a6583b060b7a 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 90 102 3.8E-29 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 M634_14325 3f05f3e41c070667fbd4a6583b060b7a 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 29 39 3.8E-29 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 M634_14325 3f05f3e41c070667fbd4a6583b060b7a 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 16 28 3.8E-29 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 M634_14325 3f05f3e41c070667fbd4a6583b060b7a 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 359 371 3.8E-29 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 M634_14325 3f05f3e41c070667fbd4a6583b060b7a 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 45 57 3.8E-29 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 M634_14325 3f05f3e41c070667fbd4a6583b060b7a 519 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 21 38 - T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 M634_14325 3f05f3e41c070667fbd4a6583b060b7a 519 Gene3D G3DSA:1.10.8.870 404 475 1.2E-14 T 12-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 M634_14325 3f05f3e41c070667fbd4a6583b060b7a 519 Gene3D G3DSA:3.30.9.10 94 332 1.1E-142 T 12-10-2018 M634_14325 3f05f3e41c070667fbd4a6583b060b7a 519 Gene3D G3DSA:3.50.50.60 17 378 1.1E-142 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_06875 7af4f76c8eca39ab546b2e9e0354d083 182 SUPERFAMILY SSF55729 3 177 4.15E-45 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_06875 7af4f76c8eca39ab546b2e9e0354d083 182 Gene3D G3DSA:3.40.630.30 1 178 6.0E-47 T 12-10-2018 M634_06875 7af4f76c8eca39ab546b2e9e0354d083 182 Pfam PF13302 Acetyltransferase (GNAT) domain 11 153 2.4E-22 T 12-10-2018 IPR000182 GNAT domain M634_09480 656198c90094c8fa7ca6a1978839f70e 57 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 51 1.0E-22 T 12-10-2018 IPR007040 Ribosome modulation factor M634_09480 656198c90094c8fa7ca6a1978839f70e 57 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 29.833 T 12-10-2018 IPR007040 Ribosome modulation factor M634_09480 656198c90094c8fa7ca6a1978839f70e 57 Gene3D G3DSA:1.10.10.620 1 57 2.7E-29 T 12-10-2018 IPR023200 Ribosome modulation factor domain superfamily M634_09480 656198c90094c8fa7ca6a1978839f70e 57 Pfam PF04957 Ribosome modulation factor 1 54 2.6E-28 T 12-10-2018 IPR007040 Ribosome modulation factor M634_24550 1a4605ce1475aa82b3d998d40d71348d 221 Pfam PF01730 UreF 35 178 1.6E-35 T 12-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 M634_24550 1a4605ce1475aa82b3d998d40d71348d 221 Gene3D G3DSA:1.10.4190.10 1 197 2.9E-52 T 12-10-2018 IPR038277 UreF domain superfamily M634_24550 1a4605ce1475aa82b3d998d40d71348d 221 Hamap MF_01385 Urease accessory protein UreF [ureF]. 3 221 31.216 T 12-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 M634_24550 1a4605ce1475aa82b3d998d40d71348d 221 PIRSF PIRSF009467 1 221 1.8E-63 T 12-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 M634_09440 5bc34f1c7b0bf6b680e9e25ae1b5e7b3 868 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 443 544 3.9E-33 T 12-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold M634_09440 5bc34f1c7b0bf6b680e9e25ae1b5e7b3 868 Pfam PF01433 Peptidase family M1 domain 207 435 2.5E-57 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 M634_09440 5bc34f1c7b0bf6b680e9e25ae1b5e7b3 868 Gene3D G3DSA:2.60.40.1840 443 544 2.4E-35 T 12-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily M634_09440 5bc34f1c7b0bf6b680e9e25ae1b5e7b3 868 Gene3D G3DSA:1.25.50.10 545 867 3.1E-115 T 12-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily M634_09440 5bc34f1c7b0bf6b680e9e25ae1b5e7b3 868 SUPERFAMILY SSF55486 202 449 1.74E-74 T 12-10-2018 M634_09440 5bc34f1c7b0bf6b680e9e25ae1b5e7b3 868 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 547 866 6.3E-114 T 12-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal M634_09440 5bc34f1c7b0bf6b680e9e25ae1b5e7b3 868 Gene3D G3DSA:1.10.390.10 279 442 6.0E-65 T 12-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily M634_09440 5bc34f1c7b0bf6b680e9e25ae1b5e7b3 868 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 866 0.0 T 12-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 M634_09440 5bc34f1c7b0bf6b680e9e25ae1b5e7b3 868 SUPERFAMILY SSF63737 2 192 3.53E-46 T 12-10-2018 M634_09440 5bc34f1c7b0bf6b680e9e25ae1b5e7b3 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 312 324 4.3E-9 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 M634_09440 5bc34f1c7b0bf6b680e9e25ae1b5e7b3 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 175 190 4.3E-9 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 M634_09440 5bc34f1c7b0bf6b680e9e25ae1b5e7b3 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 293 308 4.3E-9 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 M634_09440 5bc34f1c7b0bf6b680e9e25ae1b5e7b3 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 257 267 4.3E-9 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 M634_09440 5bc34f1c7b0bf6b680e9e25ae1b5e7b3 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 125 140 4.3E-9 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 M634_09440 5bc34f1c7b0bf6b680e9e25ae1b5e7b3 868 Gene3D G3DSA:2.60.40.1730 15 193 1.1E-70 T 12-10-2018 M634_09440 5bc34f1c7b0bf6b680e9e25ae1b5e7b3 868 Gene3D G3DSA:1.10.1740.60 194 278 3.3E-40 T 12-10-2018 M634_04800 79ac0c52cf7d42c00870da09e5dedc16 247 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 3 207 30.538 T 12-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 M634_04800 79ac0c52cf7d42c00870da09e5dedc16 247 Pfam PF03932 CutC family 4 205 4.6E-84 T 12-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 M634_04800 79ac0c52cf7d42c00870da09e5dedc16 247 Gene3D G3DSA:3.20.20.380 3 247 6.2E-87 T 12-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 M634_04800 79ac0c52cf7d42c00870da09e5dedc16 247 SUPERFAMILY SSF110395 4 247 3.01E-74 T 12-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 M634_09280 dc3cc369926f7c6846f5ff05b6e735b6 658 Gene3D G3DSA:1.25.40.10 86 328 3.6E-24 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_09280 dc3cc369926f7c6846f5ff05b6e735b6 658 Gene3D G3DSA:3.30.70.270 477 647 9.9E-40 T 12-10-2018 M634_09280 dc3cc369926f7c6846f5ff05b6e735b6 658 Gene3D G3DSA:1.25.40.10 333 429 3.7E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_09280 dc3cc369926f7c6846f5ff05b6e735b6 658 SMART SM00028 376 409 25.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_09280 dc3cc369926f7c6846f5ff05b6e735b6 658 SMART SM00028 179 212 400.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_09280 dc3cc369926f7c6846f5ff05b6e735b6 658 SMART SM00028 296 329 10.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_09280 dc3cc369926f7c6846f5ff05b6e735b6 658 SMART SM00028 216 249 91.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_09280 dc3cc369926f7c6846f5ff05b6e735b6 658 SMART SM00028 256 289 0.029 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_09280 dc3cc369926f7c6846f5ff05b6e735b6 658 SMART SM00028 336 369 24.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_09280 dc3cc369926f7c6846f5ff05b6e735b6 658 SUPERFAMILY SSF48452 218 419 2.78E-24 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_09280 dc3cc369926f7c6846f5ff05b6e735b6 658 Pfam PF00990 Diguanylate cyclase, GGDEF domain 483 639 8.8E-34 T 12-10-2018 IPR000160 GGDEF domain M634_09280 dc3cc369926f7c6846f5ff05b6e735b6 658 SMART SM00267 472 644 8.4E-40 T 12-10-2018 IPR000160 GGDEF domain M634_09280 dc3cc369926f7c6846f5ff05b6e735b6 658 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 481 642 8.4E-38 T 12-10-2018 IPR000160 GGDEF domain M634_09280 dc3cc369926f7c6846f5ff05b6e735b6 658 SUPERFAMILY SSF48452 92 207 1.4E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_09280 dc3cc369926f7c6846f5ff05b6e735b6 658 Pfam PF13176 Tetratricopeptide repeat 381 409 0.0058 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_09280 dc3cc369926f7c6846f5ff05b6e735b6 658 SUPERFAMILY SSF55073 488 642 3.14E-34 T 12-10-2018 IPR029787 Nucleotide cyclase M634_09280 dc3cc369926f7c6846f5ff05b6e735b6 658 Pfam PF13424 Tetratricopeptide repeat 218 287 2.5E-8 T 12-10-2018 M634_06550 bcb7b6beb2028d467e094b9565ac8335 489 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 5 475 45.762 T 12-10-2018 IPR003846 Uncharacterised protein family UPF0061 M634_06550 bcb7b6beb2028d467e094b9565ac8335 489 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 7 458 1.2E-156 T 12-10-2018 IPR003846 Uncharacterised protein family UPF0061 M634_01415 a125561475d76e2867cbf63b2a6b7e76 828 Gene3D G3DSA:3.30.70.270 399 567 9.5E-15 T 12-10-2018 M634_01415 a125561475d76e2867cbf63b2a6b7e76 828 SMART SM00267 402 572 0.0086 T 12-10-2018 IPR000160 GGDEF domain M634_01415 a125561475d76e2867cbf63b2a6b7e76 828 SUPERFAMILY SSF55073 419 526 4.16E-8 T 12-10-2018 IPR029787 Nucleotide cyclase M634_01415 a125561475d76e2867cbf63b2a6b7e76 828 Gene3D G3DSA:3.20.20.450 594 827 9.1E-57 T 12-10-2018 IPR035919 EAL domain superfamily M634_01415 a125561475d76e2867cbf63b2a6b7e76 828 Pfam PF08495 FIST N domain 31 212 1.9E-16 T 12-10-2018 IPR013702 FIST domain, N-terminal M634_01415 a125561475d76e2867cbf63b2a6b7e76 828 SMART SM00052 590 828 2.3E-27 T 12-10-2018 IPR001633 EAL domain M634_01415 a125561475d76e2867cbf63b2a6b7e76 828 SMART SM00897 27 214 1.9E-26 T 12-10-2018 IPR013702 FIST domain, N-terminal M634_01415 a125561475d76e2867cbf63b2a6b7e76 828 Pfam PF00990 Diguanylate cyclase, GGDEF domain 415 477 1.7E-6 T 12-10-2018 IPR000160 GGDEF domain M634_01415 a125561475d76e2867cbf63b2a6b7e76 828 SUPERFAMILY SSF141868 598 825 4.97E-55 T 12-10-2018 IPR035919 EAL domain superfamily M634_01415 a125561475d76e2867cbf63b2a6b7e76 828 Pfam PF00563 EAL domain 598 824 5.9E-55 T 12-10-2018 IPR001633 EAL domain M634_01415 a125561475d76e2867cbf63b2a6b7e76 828 SMART SM01204 215 341 2.6E-17 T 12-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 M634_01415 a125561475d76e2867cbf63b2a6b7e76 828 Pfam PF10442 FIST C domain 215 338 3.1E-11 T 12-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 M634_16770 7ad8744280ceb95e64e3c20afffafc92 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 306 1.2E-23 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_16770 7ad8744280ceb95e64e3c20afffafc92 310 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 33 307 3.8E-92 T 12-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 M634_16770 7ad8744280ceb95e64e3c20afffafc92 310 SUPERFAMILY SSF161098 34 305 3.01E-35 T 12-10-2018 IPR035906 MetI-like superfamily M634_16770 7ad8744280ceb95e64e3c20afffafc92 310 Gene3D G3DSA:1.10.3720.10 79 309 3.3E-32 T 12-10-2018 IPR035906 MetI-like superfamily M634_00735 552a227d96a7d7efba79b7b698a5c63a 125 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 11 125 7.0E-50 T 12-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 M634_00735 552a227d96a7d7efba79b7b698a5c63a 125 Pfam PF02313 Fumarate reductase subunit D 11 123 4.2E-44 T 12-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 M634_00735 552a227d96a7d7efba79b7b698a5c63a 125 SUPERFAMILY SSF81343 7 125 4.36E-51 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M634_00735 552a227d96a7d7efba79b7b698a5c63a 125 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 7 125 24.893 T 12-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 M634_00735 552a227d96a7d7efba79b7b698a5c63a 125 Gene3D G3DSA:1.20.1300.10 6 125 1.6E-44 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M634_00735 552a227d96a7d7efba79b7b698a5c63a 125 PIRSF PIRSF000179 6 125 8.9E-56 T 12-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 M634_06835 74e8c041b4be027701c8f322d0098b86 663 SMART SM00283 401 662 6.1E-74 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_06835 74e8c041b4be027701c8f322d0098b86 663 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 470 629 4.2E-44 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_06835 74e8c041b4be027701c8f322d0098b86 663 SUPERFAMILY SSF58104 354 663 2.62E-73 T 12-10-2018 M634_06835 74e8c041b4be027701c8f322d0098b86 663 SMART SM00304 334 386 4.7E-5 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_06835 74e8c041b4be027701c8f322d0098b86 663 Gene3D G3DSA:1.10.287.950 333 663 3.0E-70 T 12-10-2018 M634_05260 d2de917bb5b4dd172425efd484822c4a 356 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 50 317 6.3E-73 T 12-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 M634_05260 d2de917bb5b4dd172425efd484822c4a 356 PIRSF PIRSF039012 3 325 2.4E-92 T 12-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 M634_05260 d2de917bb5b4dd172425efd484822c4a 356 Gene3D G3DSA:3.40.630.10 15 320 1.7E-92 T 12-10-2018 M634_05260 d2de917bb5b4dd172425efd484822c4a 356 SUPERFAMILY SSF53187 22 318 2.25E-76 T 12-10-2018 M634_09505 0a33b4c59e86170f14492d7e7f5c67b0 124 Gene3D G3DSA:3.30.1150.10 31 117 1.6E-5 T 12-10-2018 M634_12005 2e311723b3bb8c27621c3006b1593e1b 525 PIRSF PIRSF001373 3 525 2.4E-263 T 12-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 M634_12005 2e311723b3bb8c27621c3006b1593e1b 525 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 22 518 4.0E-224 T 12-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 M634_12005 2e311723b3bb8c27621c3006b1593e1b 525 PRINTS PR00095 Anthranilate synthase component I signature 463 477 5.9E-23 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 M634_12005 2e311723b3bb8c27621c3006b1593e1b 525 PRINTS PR00095 Anthranilate synthase component I signature 448 462 5.9E-23 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 M634_12005 2e311723b3bb8c27621c3006b1593e1b 525 PRINTS PR00095 Anthranilate synthase component I signature 368 381 5.9E-23 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 M634_12005 2e311723b3bb8c27621c3006b1593e1b 525 PRINTS PR00095 Anthranilate synthase component I signature 354 367 5.9E-23 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 M634_12005 2e311723b3bb8c27621c3006b1593e1b 525 Gene3D G3DSA:3.60.120.10 8 522 2.9E-184 T 12-10-2018 IPR005801 ADC synthase GO:0009058 M634_12005 2e311723b3bb8c27621c3006b1593e1b 525 Pfam PF00425 chorismate binding enzyme 247 506 8.9E-85 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal M634_12005 2e311723b3bb8c27621c3006b1593e1b 525 SUPERFAMILY SSF56322 14 517 8.9E-159 T 12-10-2018 IPR005801 ADC synthase GO:0009058 M634_12005 2e311723b3bb8c27621c3006b1593e1b 525 Pfam PF04715 Anthranilate synthase component I, N terminal region 24 197 6.4E-14 T 12-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 M634_07515 954203f9e8fee6c1e20c1a08284edf28 287 Hamap MF_00188 Protease HtpX [htpX]. 1 287 24.997 T 12-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 M634_07515 954203f9e8fee6c1e20c1a08284edf28 287 Gene3D G3DSA:3.30.2010.10 68 161 1.3E-37 T 12-10-2018 M634_07515 954203f9e8fee6c1e20c1a08284edf28 287 Pfam PF01435 Peptidase family M48 78 286 9.8E-40 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 M634_17365 4cff2a7a59ae17b6e9743e1dab6fa898 72 Gene3D G3DSA:1.10.720.30 14 71 3.7E-30 T 12-10-2018 IPR036361 SAP domain superfamily M634_17365 4cff2a7a59ae17b6e9743e1dab6fa898 72 Pfam PF09905 DNA-binding protein VF530 6 68 9.3E-35 T 12-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 M634_03515 05965aa5fef7be6eb32d099a976e3acd 66 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 65 6.0E-30 T 12-10-2018 IPR009491 Protein of unknown function DUF1107 M634_03515 05965aa5fef7be6eb32d099a976e3acd 66 Pfam PF06526 Protein of unknown function (DUF1107) 2 64 2.7E-25 T 12-10-2018 IPR009491 Protein of unknown function DUF1107 M634_03515 05965aa5fef7be6eb32d099a976e3acd 66 Gene3D G3DSA:3.30.1910.10 2 65 1.1E-18 T 12-10-2018 M634_01905 a909fcd6bbd97c2a817942ce1a3b8a03 84 Gene3D G3DSA:1.20.20.10 1 77 1.2E-27 T 12-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_01905 a909fcd6bbd97c2a817942ce1a3b8a03 84 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 19 76 1.2E-30 T 12-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 M634_01905 a909fcd6bbd97c2a817942ce1a3b8a03 84 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 12-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_01905 a909fcd6bbd97c2a817942ce1a3b8a03 84 SUPERFAMILY SSF81333 3 78 1.7E-19 T 12-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily M634_01905 a909fcd6bbd97c2a817942ce1a3b8a03 84 Pfam PF00137 ATP synthase subunit C 10 72 1.3E-10 T 12-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 M634_01905 a909fcd6bbd97c2a817942ce1a3b8a03 84 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 74 13.874 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_01905 a909fcd6bbd97c2a817942ce1a3b8a03 84 PRINTS PR00124 ATP synthase C subunit signature 11 30 1.7E-6 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_01905 a909fcd6bbd97c2a817942ce1a3b8a03 84 PRINTS PR00124 ATP synthase C subunit signature 32 47 1.7E-6 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_01905 a909fcd6bbd97c2a817942ce1a3b8a03 84 PRINTS PR00124 ATP synthase C subunit signature 49 74 1.7E-6 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_18195 ee41c5ab04527a18da793b448efab7ce 324 Gene3D G3DSA:1.10.10.2830 153 280 6.6E-16 T 12-10-2018 M634_18195 ee41c5ab04527a18da793b448efab7ce 324 SUPERFAMILY SSF110849 73 150 4.71E-9 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily M634_18195 ee41c5ab04527a18da793b448efab7ce 324 SMART SM00470 53 149 5.2E-8 T 12-10-2018 IPR003115 ParB/Sulfiredoxin M634_18195 ee41c5ab04527a18da793b448efab7ce 324 Pfam PF02195 ParB-like nuclease domain 70 145 2.6E-8 T 12-10-2018 IPR003115 ParB/Sulfiredoxin M634_18195 ee41c5ab04527a18da793b448efab7ce 324 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 67 227 3.8E-22 T 12-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 M634_20800 ad5baa07b1131ff11bf356b5d27afb5a 266 Pfam PF00005 ABC transporter 23 185 1.3E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_20800 ad5baa07b1131ff11bf356b5d27afb5a 266 SUPERFAMILY SSF52540 6 256 3.62E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_20800 ad5baa07b1131ff11bf356b5d27afb5a 266 Gene3D G3DSA:3.40.50.300 1 261 9.6E-62 T 12-10-2018 M634_20800 ad5baa07b1131ff11bf356b5d27afb5a 266 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 235 256 4.0E-8 T 12-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal M634_20800 ad5baa07b1131ff11bf356b5d27afb5a 266 SMART SM00382 32 242 3.2E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_07545 1127aee4ef1fda076ca281106b55286f 170 Pfam PF11086 Protein of unknown function (DUF2878) 4 150 1.5E-30 T 12-10-2018 IPR021306 Protein of unknown function DUF2878 M634_15200 22f4392f9bd06bfc2b0e3d6783c2d116 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 7 204 3.8E-71 T 12-10-2018 M634_15200 22f4392f9bd06bfc2b0e3d6783c2d116 208 SUPERFAMILY SSF53335 14 204 3.53E-45 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_15200 22f4392f9bd06bfc2b0e3d6783c2d116 208 Gene3D G3DSA:3.40.50.150 2 206 2.2E-75 T 12-10-2018 M634_15200 22f4392f9bd06bfc2b0e3d6783c2d116 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 38.618 T 12-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 M634_15200 22f4392f9bd06bfc2b0e3d6783c2d116 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 12-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 M634_15200 22f4392f9bd06bfc2b0e3d6783c2d116 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 5 206 2.2E-82 T 12-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 M634_01390 9871e65429b307f497c5913806438425 336 SUPERFAMILY SSF53474 41 324 4.19E-44 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_01390 9871e65429b307f497c5913806438425 336 Gene3D G3DSA:3.40.50.1820 29 332 1.0E-50 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_01390 9871e65429b307f497c5913806438425 336 Pfam PF12146 Serine aminopeptidase, S33 53 310 5.7E-60 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 M634_14720 a252af0003ce44ab057f24fdb44a2203 335 SUPERFAMILY SSF56935 22 335 5.49E-53 T 12-10-2018 M634_14720 a252af0003ce44ab057f24fdb44a2203 335 Gene3D G3DSA:2.40.160.10 22 335 8.6E-63 T 12-10-2018 IPR023614 Porin domain superfamily M634_14720 a252af0003ce44ab057f24fdb44a2203 335 Pfam PF13609 Gram-negative porin 10 299 2.5E-24 T 12-10-2018 M634_04220 eb8ab778ce474c16cfd2229135590577 305 SUPERFAMILY SSF54211 3 125 3.57E-42 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M634_04220 eb8ab778ce474c16cfd2229135590577 305 SUPERFAMILY SSF54211 134 278 7.05E-54 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M634_04220 eb8ab778ce474c16cfd2229135590577 305 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 46.983 T 12-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 M634_04220 eb8ab778ce474c16cfd2229135590577 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 298 4.5E-143 T 12-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 M634_04220 eb8ab778ce474c16cfd2229135590577 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 3.0E-109 T 12-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 M634_04220 eb8ab778ce474c16cfd2229135590577 305 Gene3D G3DSA:3.30.230.20 1 128 2.0E-51 T 12-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 M634_04220 eb8ab778ce474c16cfd2229135590577 305 Gene3D G3DSA:3.30.1700.10 129 305 7.2E-72 T 12-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 M634_18710 64779bcc3defccad4333d8569db763f8 204 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 5 199 3.1E-65 T 12-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 M634_18710 64779bcc3defccad4333d8569db763f8 204 Gene3D G3DSA:3.20.20.70 1 203 5.5E-72 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_18710 64779bcc3defccad4333d8569db763f8 204 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 4 204 27.686 T 12-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 M634_18710 64779bcc3defccad4333d8569db763f8 204 SUPERFAMILY SSF51391 3 202 2.09E-67 T 12-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 M634_18710 64779bcc3defccad4333d8569db763f8 204 Pfam PF02581 Thiamine monophosphate synthase 6 186 5.0E-65 T 12-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 M634_12465 dae02ea0c2d3fe185e3522afe4186eaa 77 SUPERFAMILY SSF47336 2 76 1.2E-23 T 12-10-2018 IPR036736 ACP-like superfamily M634_12465 dae02ea0c2d3fe185e3522afe4186eaa 77 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site M634_12465 dae02ea0c2d3fe185e3522afe4186eaa 77 Pfam PF00550 Phosphopantetheine attachment site 6 73 2.2E-16 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain M634_12465 dae02ea0c2d3fe185e3522afe4186eaa 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 6.6E-37 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 M634_12465 dae02ea0c2d3fe185e3522afe4186eaa 77 Gene3D G3DSA:1.10.1200.10 1 76 1.9E-30 T 12-10-2018 IPR036736 ACP-like superfamily M634_12465 dae02ea0c2d3fe185e3522afe4186eaa 77 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.938 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 M634_14795 b430ca90142eb20b1b9d575ec3878c06 328 SUPERFAMILY SSF161098 93 324 2.4E-15 T 12-10-2018 IPR035906 MetI-like superfamily M634_14795 b430ca90142eb20b1b9d575ec3878c06 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 325 1.4E-38 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_14795 b430ca90142eb20b1b9d575ec3878c06 328 Gene3D G3DSA:1.10.3720.10 87 327 1.3E-18 T 12-10-2018 IPR035906 MetI-like superfamily M634_02850 dad7166ccb53280838648e78ec35497f 866 Gene3D G3DSA:2.170.130.10 33 173 1.8E-35 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily M634_02850 dad7166ccb53280838648e78ec35497f 866 SUPERFAMILY SSF56935 28 866 3.97E-97 T 12-10-2018 M634_02850 dad7166ccb53280838648e78ec35497f 866 Pfam PF00593 TonB dependent receptor 354 864 4.3E-50 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel M634_02850 dad7166ccb53280838648e78ec35497f 866 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 169 9.2E-25 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain M634_07675 fc156fa0bc5e70f8ccb945acceb28a84 212 Pfam PF02698 DUF218 domain 33 145 1.7E-22 T 12-10-2018 IPR003848 Domain of unknown function DUF218 M634_07675 fc156fa0bc5e70f8ccb945acceb28a84 212 Gene3D G3DSA:3.40.50.620 15 152 5.4E-31 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M634_02300 3b751134119be0803749f4b17bea8ed6 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 3.8E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_02300 3b751134119be0803749f4b17bea8ed6 311 SUPERFAMILY SSF46785 7 88 4.69E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_02300 3b751134119be0803749f4b17bea8ed6 311 Gene3D G3DSA:3.40.190.10 92 297 1.3E-15 T 12-10-2018 M634_02300 3b751134119be0803749f4b17bea8ed6 311 Gene3D G3DSA:1.10.10.10 1 91 9.9E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_02300 3b751134119be0803749f4b17bea8ed6 311 SUPERFAMILY SSF53850 92 300 3.26E-18 T 12-10-2018 M634_02300 3b751134119be0803749f4b17bea8ed6 311 Gene3D G3DSA:3.40.190.10 173 274 1.3E-15 T 12-10-2018 M634_02300 3b751134119be0803749f4b17bea8ed6 311 Pfam PF03466 LysR substrate binding domain 95 255 5.1E-11 T 12-10-2018 IPR005119 LysR, substrate-binding M634_09790 0e05aabb9b8a002d1662de7ee0d42205 208 SUPERFAMILY SSF89155 4 189 9.03E-53 T 12-10-2018 IPR036411 TorD-like superfamily M634_09790 0e05aabb9b8a002d1662de7ee0d42205 208 Pfam PF02613 Nitrate reductase delta subunit 43 156 1.0E-30 T 12-10-2018 IPR020945 DMSO/Nitrate reductase chaperone M634_09790 0e05aabb9b8a002d1662de7ee0d42205 208 Gene3D G3DSA:1.10.3480.10 1 195 3.4E-41 T 12-10-2018 M634_01515 4fb16c7ae7169f5c98655b517eea6b7f 237 Gene3D G3DSA:2.40.30.10 1 102 1.9E-22 T 12-10-2018 M634_01515 4fb16c7ae7169f5c98655b517eea6b7f 237 Pfam PF00175 Oxidoreductase NAD-binding domain 112 215 3.2E-23 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 M634_01515 4fb16c7ae7169f5c98655b517eea6b7f 237 Gene3D G3DSA:3.40.50.80 103 237 1.3E-30 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M634_01515 4fb16c7ae7169f5c98655b517eea6b7f 237 Pfam PF00970 Oxidoreductase FAD-binding domain 22 99 1.1E-4 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 M634_01515 4fb16c7ae7169f5c98655b517eea6b7f 237 SUPERFAMILY SSF52343 104 235 6.81E-35 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain M634_01515 4fb16c7ae7169f5c98655b517eea6b7f 237 SUPERFAMILY SSF63380 2 101 4.74E-17 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel M634_01515 4fb16c7ae7169f5c98655b517eea6b7f 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 46 53 7.5E-14 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 M634_01515 4fb16c7ae7169f5c98655b517eea6b7f 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 95 104 7.5E-14 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 M634_01515 4fb16c7ae7169f5c98655b517eea6b7f 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 30 42 7.5E-14 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 M634_01515 4fb16c7ae7169f5c98655b517eea6b7f 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 111 130 7.5E-14 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 M634_01515 4fb16c7ae7169f5c98655b517eea6b7f 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 136 145 7.5E-14 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 M634_12680 a9d5ea830b161f66069ff35bd0a83709 297 SUPERFAMILY SSF142338 6 291 3.92E-84 T 12-10-2018 M634_12680 a9d5ea830b161f66069ff35bd0a83709 297 Gene3D G3DSA:3.40.50.12300 4 297 3.7E-81 T 12-10-2018 IPR038136 Gluconeogenesis factor superfamily M634_12680 a9d5ea830b161f66069ff35bd0a83709 297 Pfam PF01933 Uncharacterised protein family UPF0052 9 286 1.1E-76 T 12-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 M634_12680 a9d5ea830b161f66069ff35bd0a83709 297 Hamap MF_00973 Gluconeogenesis factor. 5 296 30.399 T 12-10-2018 IPR010119 Gluconeogenesis factor M634_12680 a9d5ea830b161f66069ff35bd0a83709 297 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 9 290 3.8E-102 T 12-10-2018 IPR010119 Gluconeogenesis factor M634_11010 5aeefe128789562f4302633234eed080 174 Pfam PF13302 Acetyltransferase (GNAT) domain 9 145 6.2E-14 T 12-10-2018 IPR000182 GNAT domain M634_11010 5aeefe128789562f4302633234eed080 174 SUPERFAMILY SSF55729 3 156 8.11E-22 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_11010 5aeefe128789562f4302633234eed080 174 Gene3D G3DSA:3.40.630.30 1 161 2.5E-21 T 12-10-2018 M634_16660 d3a85c1c40354bd0d4e2a4bc0b9d4ec9 309 SUPERFAMILY SSF53807 43 302 1.14E-54 T 12-10-2018 M634_16660 d3a85c1c40354bd0d4e2a4bc0b9d4ec9 309 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 64 82 5.2E-6 T 12-10-2018 M634_16660 d3a85c1c40354bd0d4e2a4bc0b9d4ec9 309 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 95 110 5.2E-6 T 12-10-2018 M634_16660 d3a85c1c40354bd0d4e2a4bc0b9d4ec9 309 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 283 296 5.2E-6 T 12-10-2018 M634_16660 d3a85c1c40354bd0d4e2a4bc0b9d4ec9 309 Pfam PF01497 Periplasmic binding protein 47 276 3.2E-22 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain M634_16660 d3a85c1c40354bd0d4e2a4bc0b9d4ec9 309 Gene3D G3DSA:3.40.50.1980 30 131 3.9E-29 T 12-10-2018 M634_16660 d3a85c1c40354bd0d4e2a4bc0b9d4ec9 309 Gene3D G3DSA:3.40.50.1980 133 304 1.8E-47 T 12-10-2018 M634_00220 338fd11bc58656da9428bbc85958230f 197 Pfam PF04350 Pilus assembly protein, PilO 48 189 4.0E-45 T 12-10-2018 IPR007445 Pilus assembly protein, PilO M634_00220 338fd11bc58656da9428bbc85958230f 197 PIRSF PIRSF016482 1 197 2.0E-68 T 12-10-2018 IPR007445 Pilus assembly protein, PilO M634_00220 338fd11bc58656da9428bbc85958230f 197 Gene3D G3DSA:3.30.70.60 92 197 2.9E-26 T 12-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 M634_08835 8f8f046c5e20854f76256d2362f258dc 203 Pfam PF12261 Thermostable hemolysin 18 188 5.3E-61 T 12-10-2018 IPR022050 Thermostable hemolysin M634_14500 75b9437f8f104a9e223639bd23c3f56d 568 Pfam PF00501 AMP-binding enzyme 29 445 2.0E-87 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 M634_14500 75b9437f8f104a9e223639bd23c3f56d 568 Gene3D G3DSA:3.40.50.12780 22 441 3.7E-84 T 12-10-2018 M634_14500 75b9437f8f104a9e223639bd23c3f56d 568 SUPERFAMILY SSF56801 21 552 2.35E-109 T 12-10-2018 M634_14500 75b9437f8f104a9e223639bd23c3f56d 568 ProSitePatterns PS00455 Putative AMP-binding domain signature. 187 198 - T 12-10-2018 IPR020845 AMP-binding, conserved site M634_13835 7ef1cc9523c47cd8428cb451c028c625 191 Gene3D G3DSA:3.40.50.10490 1 191 3.6E-71 T 12-10-2018 M634_13835 7ef1cc9523c47cd8428cb451c028c625 191 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 37.866 T 12-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 M634_13835 7ef1cc9523c47cd8428cb451c028c625 191 SUPERFAMILY SSF53697 1 189 3.84E-52 T 12-10-2018 M634_13835 7ef1cc9523c47cd8428cb451c028c625 191 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 2.5E-81 T 12-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 M634_13835 7ef1cc9523c47cd8428cb451c028c625 191 Pfam PF13580 SIS domain 12 146 3.2E-30 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 M634_23345 98f43ffd812498d68f69a9895e1a6dcf 222 Gene3D G3DSA:1.10.3720.10 3 217 8.9E-41 T 12-10-2018 IPR035906 MetI-like superfamily M634_23345 98f43ffd812498d68f69a9895e1a6dcf 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 41 214 1.6E-13 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_23345 98f43ffd812498d68f69a9895e1a6dcf 222 SUPERFAMILY SSF161098 9 202 1.57E-31 T 12-10-2018 IPR035906 MetI-like superfamily M634_23345 98f43ffd812498d68f69a9895e1a6dcf 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 6 112 3.6E-15 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 M634_03280 f63f291b9325042f371bc646bf08f846 209 Pfam PF00297 Ribosomal protein L3 93 182 1.5E-16 T 12-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_03280 f63f291b9325042f371bc646bf08f846 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 6.7E-95 T 12-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03280 f63f291b9325042f371bc646bf08f846 209 Gene3D G3DSA:2.40.50.620 32 96 2.2E-15 T 12-10-2018 M634_03280 f63f291b9325042f371bc646bf08f846 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 12-10-2018 IPR019926 Ribosomal protein L3, conserved site M634_03280 f63f291b9325042f371bc646bf08f846 209 SUPERFAMILY SSF50447 1 208 3.62E-84 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily M634_03280 f63f291b9325042f371bc646bf08f846 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 41.124 T 12-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03280 f63f291b9325042f371bc646bf08f846 209 Gene3D G3DSA:2.40.30.10 128 209 5.4E-20 T 12-10-2018 M634_12110 5efb3e130bc81ca1b8ba0faf745dcc46 818 SUPERFAMILY SSF54631 688 816 9.62E-8 T 12-10-2018 M634_12110 5efb3e130bc81ca1b8ba0faf745dcc46 818 SMART SM00052 417 663 2.5E-65 T 12-10-2018 IPR001633 EAL domain M634_12110 5efb3e130bc81ca1b8ba0faf745dcc46 818 Gene3D G3DSA:3.20.20.450 416 671 9.6E-71 T 12-10-2018 IPR035919 EAL domain superfamily M634_12110 5efb3e130bc81ca1b8ba0faf745dcc46 818 Gene3D G3DSA:3.10.580.10 683 816 3.4E-7 T 12-10-2018 M634_12110 5efb3e130bc81ca1b8ba0faf745dcc46 818 Gene3D G3DSA:3.30.450.20 121 239 9.5E-15 T 12-10-2018 M634_12110 5efb3e130bc81ca1b8ba0faf745dcc46 818 Pfam PF00563 EAL domain 426 657 3.1E-61 T 12-10-2018 IPR001633 EAL domain M634_12110 5efb3e130bc81ca1b8ba0faf745dcc46 818 SUPERFAMILY SSF55785 126 239 1.29E-15 T 12-10-2018 IPR035965 PAS domain superfamily M634_12110 5efb3e130bc81ca1b8ba0faf745dcc46 818 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 128 240 1.8E-10 T 12-10-2018 IPR000014 PAS domain M634_12110 5efb3e130bc81ca1b8ba0faf745dcc46 818 SUPERFAMILY SSF141868 424 661 5.49E-66 T 12-10-2018 IPR035919 EAL domain superfamily M634_12110 5efb3e130bc81ca1b8ba0faf745dcc46 818 Pfam PF00989 PAS fold 132 238 2.4E-8 T 12-10-2018 IPR013767 PAS fold GO:0006355 M634_12110 5efb3e130bc81ca1b8ba0faf745dcc46 818 SMART SM00091 128 194 6.0E-6 T 12-10-2018 IPR000014 PAS domain M634_22155 8f4aeb33ee6cc86838f7c12db1b7ad29 583 SMART SM00471 403 540 2.8E-8 T 12-10-2018 IPR003607 HD/PDEase domain M634_22155 8f4aeb33ee6cc86838f7c12db1b7ad29 583 Gene3D G3DSA:3.40.50.2300 152 301 1.9E-5 T 12-10-2018 M634_22155 8f4aeb33ee6cc86838f7c12db1b7ad29 583 SUPERFAMILY SSF109604 399 571 5.65E-36 T 12-10-2018 M634_22155 8f4aeb33ee6cc86838f7c12db1b7ad29 583 Gene3D G3DSA:1.10.3210.10 383 583 2.0E-68 T 12-10-2018 M634_22155 8f4aeb33ee6cc86838f7c12db1b7ad29 583 Pfam PF01966 HD domain 408 530 1.2E-16 T 12-10-2018 IPR006674 HD domain M634_19930 2c1f75ac8272197df5cd81612736911e 214 SUPERFAMILY SSF46894 147 212 2.86E-19 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M634_19930 2c1f75ac8272197df5cd81612736911e 214 Gene3D G3DSA:1.10.10.10 151 213 1.6E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_19930 2c1f75ac8272197df5cd81612736911e 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 209 3.3E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_19930 2c1f75ac8272197df5cd81612736911e 214 Gene3D G3DSA:3.40.50.2300 6 142 3.4E-24 T 12-10-2018 M634_19930 2c1f75ac8272197df5cd81612736911e 214 SMART SM00421 152 209 3.3E-22 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_19930 2c1f75ac8272197df5cd81612736911e 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 169 196 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_19930 2c1f75ac8272197df5cd81612736911e 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 1.4E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_19930 2c1f75ac8272197df5cd81612736911e 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 1.4E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_19930 2c1f75ac8272197df5cd81612736911e 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 1.4E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_08525 94ee2d80dcc21d7544dc698c43540cd3 171 Pfam PF01863 Protein of unknown function DUF45 94 150 3.8E-10 T 12-10-2018 IPR002725 Protein of unknown function DUF45 M634_08525 94ee2d80dcc21d7544dc698c43540cd3 171 Gene3D G3DSA:3.30.2010.10 73 162 7.6E-6 T 12-10-2018 M634_20970 30d8a67358d5301be3ee6240554b36ae 682 Gene3D G3DSA:1.25.40.10 54 189 5.2E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_20970 30d8a67358d5301be3ee6240554b36ae 682 SMART SM00267 505 679 4.0E-40 T 12-10-2018 IPR000160 GGDEF domain M634_20970 30d8a67358d5301be3ee6240554b36ae 682 SMART SM00028 74 107 220.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_20970 30d8a67358d5301be3ee6240554b36ae 682 SMART SM00028 152 185 20.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_20970 30d8a67358d5301be3ee6240554b36ae 682 SMART SM00028 232 265 15.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_20970 30d8a67358d5301be3ee6240554b36ae 682 SUPERFAMILY SSF55073 543 677 7.85E-42 T 12-10-2018 IPR029787 Nucleotide cyclase M634_20970 30d8a67358d5301be3ee6240554b36ae 682 SUPERFAMILY SSF48452 74 262 8.54E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_20970 30d8a67358d5301be3ee6240554b36ae 682 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 531 678 3.2E-43 T 12-10-2018 IPR000160 GGDEF domain M634_20970 30d8a67358d5301be3ee6240554b36ae 682 SUPERFAMILY SSF48452 233 399 2.09E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_20970 30d8a67358d5301be3ee6240554b36ae 682 Gene3D G3DSA:1.25.40.10 190 382 3.8E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_20970 30d8a67358d5301be3ee6240554b36ae 682 Pfam PF00990 Diguanylate cyclase, GGDEF domain 534 674 2.3E-38 T 12-10-2018 IPR000160 GGDEF domain M634_14225 87844cdaa0bb958def6ecd2eaddd02c5 269 Pfam PF00899 ThiF family 24 198 2.7E-38 T 12-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 M634_14225 87844cdaa0bb958def6ecd2eaddd02c5 269 Gene3D G3DSA:3.40.50.720 5 269 2.3E-109 T 12-10-2018 M634_14225 87844cdaa0bb958def6ecd2eaddd02c5 269 SUPERFAMILY SSF69572 9 267 4.45E-64 T 12-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 M634_13625 b4b46ea59ff6bda6dcdcd7acbc3437a1 147 Pfam PF02050 Flagellar FliJ protein 17 140 2.6E-30 T 12-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 M634_13625 b4b46ea59ff6bda6dcdcd7acbc3437a1 147 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 3 142 3.0E-39 T 12-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 M634_01640 462367e2f06b83f3cec8067aafc257d5 596 Gene3D G3DSA:3.40.350.10 147 292 9.4E-25 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal M634_01640 462367e2f06b83f3cec8067aafc257d5 596 Gene3D G3DSA:3.90.230.10 300 593 7.9E-95 T 12-10-2018 M634_01640 462367e2f06b83f3cec8067aafc257d5 596 Pfam PF00557 Metallopeptidase family M24 309 524 3.4E-42 T 12-10-2018 IPR000994 Peptidase M24 M634_01640 462367e2f06b83f3cec8067aafc257d5 596 Gene3D G3DSA:3.40.350.10 1 146 1.3E-35 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal M634_01640 462367e2f06b83f3cec8067aafc257d5 596 Pfam PF01321 Creatinase/Prolidase N-terminal domain 8 134 5.0E-19 T 12-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 M634_01640 462367e2f06b83f3cec8067aafc257d5 596 Pfam PF16188 C-terminal region of peptidase_M24 534 593 7.6E-23 T 12-10-2018 IPR032416 Peptidase M24, C-terminal domain M634_01640 462367e2f06b83f3cec8067aafc257d5 596 SUPERFAMILY SSF53092 7 130 1.29E-19 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal M634_01640 462367e2f06b83f3cec8067aafc257d5 596 Pfam PF16189 Creatinase/Prolidase N-terminal domain 148 306 1.8E-35 T 12-10-2018 M634_01640 462367e2f06b83f3cec8067aafc257d5 596 SUPERFAMILY SSF55920 303 559 2.09E-55 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like M634_05580 380d70c187ea4c889b816d0476b6d866 391 SUPERFAMILY SSF51905 3 383 4.43E-56 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_05580 380d70c187ea4c889b816d0476b6d866 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 285 300 3.0E-17 T 12-10-2018 M634_05580 380d70c187ea4c889b816d0476b6d866 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 300 316 3.0E-17 T 12-10-2018 M634_05580 380d70c187ea4c889b816d0476b6d866 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 3.0E-17 T 12-10-2018 M634_05580 380d70c187ea4c889b816d0476b6d866 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 3.0E-17 T 12-10-2018 M634_05580 380d70c187ea4c889b816d0476b6d866 391 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 390 2.0E-108 T 12-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 M634_05580 380d70c187ea4c889b816d0476b6d866 391 Gene3D G3DSA:3.30.9.50 80 274 1.2E-95 T 12-10-2018 M634_05580 380d70c187ea4c889b816d0476b6d866 391 Gene3D G3DSA:3.50.50.60 5 338 1.2E-95 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_05580 380d70c187ea4c889b816d0476b6d866 391 Pfam PF01494 FAD binding domain 4 340 4.6E-24 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 M634_03225 8fc5b476d2c98a679fed3aaca576a447 80 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 17.826 T 12-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 M634_03225 8fc5b476d2c98a679fed3aaca576a447 80 Pfam PF06005 Cell division protein ZapB 1 78 2.0E-25 T 12-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 M634_03225 8fc5b476d2c98a679fed3aaca576a447 80 Gene3D G3DSA:1.20.5.340 1 79 1.3E-28 T 12-10-2018 M634_03945 21272ba227313198b20aec3f002c0b5a 147 Gene3D G3DSA:1.10.10.410 91 147 5.5E-20 T 12-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal M634_03945 21272ba227313198b20aec3f002c0b5a 147 Gene3D G3DSA:1.10.1510.10 1 90 1.1E-27 T 12-10-2018 M634_03945 21272ba227313198b20aec3f002c0b5a 147 Pfam PF09424 Yqey-like protein 5 146 2.5E-56 T 12-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 M634_03945 21272ba227313198b20aec3f002c0b5a 147 SUPERFAMILY SSF89095 1 146 8.89E-44 T 12-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 M634_14425 428d1cdeac7ffebd82121eaeeec2ef3f 338 SMART SM00028 85 118 2.9 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_14425 428d1cdeac7ffebd82121eaeeec2ef3f 338 SMART SM00028 278 311 9.3E-5 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_14425 428d1cdeac7ffebd82121eaeeec2ef3f 338 SMART SM00028 214 247 0.014 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_14425 428d1cdeac7ffebd82121eaeeec2ef3f 338 SMART SM00028 180 213 6.7 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_14425 428d1cdeac7ffebd82121eaeeec2ef3f 338 SMART SM00028 119 152 290.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_14425 428d1cdeac7ffebd82121eaeeec2ef3f 338 Pfam PF13181 Tetratricopeptide repeat 87 118 0.16 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_14425 428d1cdeac7ffebd82121eaeeec2ef3f 338 Pfam PF07719 Tetratricopeptide repeat 278 310 2.8E-5 T 12-10-2018 IPR013105 Tetratricopeptide repeat 2 M634_14425 428d1cdeac7ffebd82121eaeeec2ef3f 338 Pfam PF13432 Tetratricopeptide repeat 187 247 0.0012 T 12-10-2018 M634_14425 428d1cdeac7ffebd82121eaeeec2ef3f 338 Gene3D G3DSA:1.25.40.10 166 336 2.3E-28 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_14425 428d1cdeac7ffebd82121eaeeec2ef3f 338 Gene3D G3DSA:1.25.40.10 22 154 6.5E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_14425 428d1cdeac7ffebd82121eaeeec2ef3f 338 SUPERFAMILY SSF48452 26 323 5.94E-26 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_21545 0c4f4d3d2f16bedccc6fa2eff0f2e10b 84 Pfam PF04964 Flp/Fap pilin component 16 63 8.3E-16 T 12-10-2018 IPR007047 Flp/Fap pilin component M634_09055 f9edd95f2ca20f05ea765930de206050 142 Pfam PF05932 Tir chaperone protein (CesT) family 9 113 9.8E-7 T 12-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 M634_09055 f9edd95f2ca20f05ea765930de206050 142 Gene3D G3DSA:3.30.1460.10 1 119 5.4E-22 T 12-10-2018 M634_09055 f9edd95f2ca20f05ea765930de206050 142 SUPERFAMILY SSF69635 4 120 1.2E-28 T 12-10-2018 M634_17085 d98d121108e635818796c77d7782ba5c 251 SMART SM00481 6 80 1.5E-6 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal M634_17085 d98d121108e635818796c77d7782ba5c 251 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 3 246 52.671 T 12-10-2018 IPR023710 Probable phosphatase YcdX GO:0008270 M634_17085 d98d121108e635818796c77d7782ba5c 251 SUPERFAMILY SSF89550 5 242 1.83E-58 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 M634_17085 d98d121108e635818796c77d7782ba5c 251 Gene3D G3DSA:3.20.20.140 3 248 1.7E-61 T 12-10-2018 M634_13475 834d9e747019e29da196d108ad443371 405 Gene3D G3DSA:1.25.40.10 153 291 1.9E-16 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_13475 834d9e747019e29da196d108ad443371 405 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 3 116 1.2E-31 T 12-10-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI M634_13475 834d9e747019e29da196d108ad443371 405 Pfam PF14559 Tetratricopeptide repeat 176 244 5.2E-8 T 12-10-2018 M634_13475 834d9e747019e29da196d108ad443371 405 SUPERFAMILY SSF48452 161 265 1.3E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_03815 2b20417bd00d985af08aeebf2eab5d88 382 SUPERFAMILY SSF51735 3 203 4.56E-42 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_03815 2b20417bd00d985af08aeebf2eab5d88 382 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 2 379 41.103 T 12-10-2018 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 M634_03815 2b20417bd00d985af08aeebf2eab5d88 382 Gene3D G3DSA:1.10.1040.10 208 382 1.4E-64 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 M634_03815 2b20417bd00d985af08aeebf2eab5d88 382 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 151 374 1.7E-58 T 12-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 M634_03815 2b20417bd00d985af08aeebf2eab5d88 382 SUPERFAMILY SSF48179 205 382 1.16E-45 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 M634_03815 2b20417bd00d985af08aeebf2eab5d88 382 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 151 163 - T 12-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 M634_03815 2b20417bd00d985af08aeebf2eab5d88 382 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 3 124 1.6E-23 T 12-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 M634_03815 2b20417bd00d985af08aeebf2eab5d88 382 Gene3D G3DSA:3.40.50.720 2 206 2.0E-79 T 12-10-2018 M634_03815 2b20417bd00d985af08aeebf2eab5d88 382 PRINTS PR00084 Mannitol dehydrogenase signature 115 128 7.7E-18 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 M634_03815 2b20417bd00d985af08aeebf2eab5d88 382 PRINTS PR00084 Mannitol dehydrogenase signature 151 164 7.7E-18 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 M634_03815 2b20417bd00d985af08aeebf2eab5d88 382 PRINTS PR00084 Mannitol dehydrogenase signature 4 14 7.7E-18 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 M634_03815 2b20417bd00d985af08aeebf2eab5d88 382 PRINTS PR00084 Mannitol dehydrogenase signature 171 186 7.7E-18 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 M634_07800 76a7cb7010409fe05ae0ccbafe8af855 361 Gene3D G3DSA:2.40.420.20 272 352 5.6E-69 T 12-10-2018 M634_07800 76a7cb7010409fe05ae0ccbafe8af855 361 Pfam PF13533 Biotin-lipoyl like 62 103 2.3E-10 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain M634_07800 76a7cb7010409fe05ae0ccbafe8af855 361 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 354 6.7E-66 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 M634_07800 76a7cb7010409fe05ae0ccbafe8af855 361 Gene3D G3DSA:1.10.287.470 91 150 5.6E-69 T 12-10-2018 M634_07800 76a7cb7010409fe05ae0ccbafe8af855 361 SUPERFAMILY SSF111369 50 265 6.8E-28 T 12-10-2018 M634_07800 76a7cb7010409fe05ae0ccbafe8af855 361 Gene3D G3DSA:2.40.50.100 57 189 5.6E-69 T 12-10-2018 M634_07800 76a7cb7010409fe05ae0ccbafe8af855 361 Gene3D G3DSA:2.40.30.170 48 270 5.6E-69 T 12-10-2018 M634_07800 76a7cb7010409fe05ae0ccbafe8af855 361 Pfam PF13437 HlyD family secretion protein 154 253 8.3E-9 T 12-10-2018 M634_15065 7c6645039b3296d01318fb54c0d29e45 172 PIRSF PIRSF006160 1 162 1.9E-67 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 M634_15065 7c6645039b3296d01318fb54c0d29e45 172 SUPERFAMILY SSF63411 4 162 4.49E-67 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 M634_15065 7c6645039b3296d01318fb54c0d29e45 172 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 154 1.0E-61 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 M634_15065 7c6645039b3296d01318fb54c0d29e45 172 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 148 1.0E-80 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 M634_15065 7c6645039b3296d01318fb54c0d29e45 172 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 35.796 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 M634_15065 7c6645039b3296d01318fb54c0d29e45 172 Gene3D G3DSA:3.30.1360.80 1 172 1.6E-74 T 12-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 M634_15065 7c6645039b3296d01318fb54c0d29e45 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 6.2E-52 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 M634_15065 7c6645039b3296d01318fb54c0d29e45 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 6.2E-52 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 M634_15065 7c6645039b3296d01318fb54c0d29e45 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 6.2E-52 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 M634_15065 7c6645039b3296d01318fb54c0d29e45 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 6.2E-52 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 M634_15065 7c6645039b3296d01318fb54c0d29e45 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 6.2E-52 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 M634_07630 fac5deabaf0f45f85875109e9687ce25 245 Gene3D G3DSA:3.20.20.70 1 245 3.5E-89 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_07630 fac5deabaf0f45f85875109e9687ce25 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 34.631 T 12-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 M634_07630 fac5deabaf0f45f85875109e9687ce25 245 SUPERFAMILY SSF51366 2 242 8.75E-64 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 M634_07630 fac5deabaf0f45f85875109e9687ce25 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 1.0E-77 T 12-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 M634_07630 fac5deabaf0f45f85875109e9687ce25 245 Pfam PF00977 Histidine biosynthesis protein 2 234 9.8E-76 T 12-10-2018 IPR006062 Histidine biosynthesis GO:0000105 M634_18650 f1c7fd6d7fc8ac578bb17569f63d03c9 478 Gene3D G3DSA:1.10.10.10 10 77 4.6E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_18650 f1c7fd6d7fc8ac578bb17569f63d03c9 478 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 6.2E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_18650 f1c7fd6d7fc8ac578bb17569f63d03c9 478 SUPERFAMILY SSF46785 11 77 8.95E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_18650 f1c7fd6d7fc8ac578bb17569f63d03c9 478 Pfam PF00155 Aminotransferase class I and II 145 456 7.5E-24 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 M634_18650 f1c7fd6d7fc8ac578bb17569f63d03c9 478 SMART SM00345 17 76 9.7E-19 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_18650 f1c7fd6d7fc8ac578bb17569f63d03c9 478 Gene3D G3DSA:3.90.1150.10 117 473 1.7E-79 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M634_18650 f1c7fd6d7fc8ac578bb17569f63d03c9 478 Gene3D G3DSA:3.40.640.10 145 361 1.7E-79 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_18650 f1c7fd6d7fc8ac578bb17569f63d03c9 478 SUPERFAMILY SSF53383 96 475 3.13E-76 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_04385 babe5d4bd326c1bcb5b0197bdab83076 226 SUPERFAMILY SSF52141 4 222 4.86E-97 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 M634_04385 babe5d4bd326c1bcb5b0197bdab83076 226 Gene3D G3DSA:3.40.470.10 1 225 1.1E-105 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 M634_04385 babe5d4bd326c1bcb5b0197bdab83076 226 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 5 214 9.7E-88 T 12-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 M634_04385 babe5d4bd326c1bcb5b0197bdab83076 226 Pfam PF03167 Uracil DNA glycosylase superfamily 54 209 7.5E-26 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 M634_04385 babe5d4bd326c1bcb5b0197bdab83076 226 SMART SM00986 49 210 5.5E-40 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 M634_04385 babe5d4bd326c1bcb5b0197bdab83076 226 SMART SM00987 49 210 5.5E-40 T 12-10-2018 M634_04385 babe5d4bd326c1bcb5b0197bdab83076 226 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 12-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 M634_04385 babe5d4bd326c1bcb5b0197bdab83076 226 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.42 T 12-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 M634_18520 746404aebb85f5bdc288e42a76ba502b 290 SUPERFAMILY SSF53850 89 288 3.8E-47 T 12-10-2018 M634_18520 746404aebb85f5bdc288e42a76ba502b 290 SUPERFAMILY SSF46785 4 87 9.17E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_18520 746404aebb85f5bdc288e42a76ba502b 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 63 2.2E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_18520 746404aebb85f5bdc288e42a76ba502b 290 Gene3D G3DSA:1.10.10.10 3 92 1.6E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_18520 746404aebb85f5bdc288e42a76ba502b 290 Pfam PF03466 LysR substrate binding domain 88 288 6.3E-47 T 12-10-2018 IPR005119 LysR, substrate-binding M634_18520 746404aebb85f5bdc288e42a76ba502b 290 Gene3D G3DSA:3.40.190.290 93 288 1.3E-68 T 12-10-2018 M634_06425 42fd02a7a5f23fdf902e9a67414bf519 154 Gene3D G3DSA:3.10.129.10 4 142 1.7E-23 T 12-10-2018 M634_06425 42fd02a7a5f23fdf902e9a67414bf519 154 PIRSF PIRSF020565 1 154 2.9E-65 T 12-10-2018 IPR016776 3-hydroxylacyl-(acyl carrier protein) dehydratase, predicted M634_06425 42fd02a7a5f23fdf902e9a67414bf519 154 Pfam PF07977 FabA-like domain 11 132 1.2E-4 T 12-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 M634_06425 42fd02a7a5f23fdf902e9a67414bf519 154 SUPERFAMILY SSF54637 4 142 3.98E-29 T 12-10-2018 IPR029069 HotDog domain superfamily M634_06195 f7e0c036f5e5473e20e9e92af94cec15 255 PRINTS PR00412 Epoxide hydrolase signature 82 95 9.5E-7 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 M634_06195 f7e0c036f5e5473e20e9e92af94cec15 255 PRINTS PR00412 Epoxide hydrolase signature 230 252 9.5E-7 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 M634_06195 f7e0c036f5e5473e20e9e92af94cec15 255 PRINTS PR00412 Epoxide hydrolase signature 39 54 9.5E-7 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 M634_06195 f7e0c036f5e5473e20e9e92af94cec15 255 PRINTS PR00412 Epoxide hydrolase signature 96 109 9.5E-7 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 M634_06195 f7e0c036f5e5473e20e9e92af94cec15 255 SUPERFAMILY SSF53474 5 253 4.59E-51 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_06195 f7e0c036f5e5473e20e9e92af94cec15 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 39 54 1.6E-5 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 M634_06195 f7e0c036f5e5473e20e9e92af94cec15 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 82 95 1.6E-5 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 M634_06195 f7e0c036f5e5473e20e9e92af94cec15 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 200 214 1.6E-5 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 M634_06195 f7e0c036f5e5473e20e9e92af94cec15 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 96 109 1.6E-5 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 M634_06195 f7e0c036f5e5473e20e9e92af94cec15 255 Pfam PF12697 Alpha/beta hydrolase family 16 247 5.1E-24 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 M634_06195 f7e0c036f5e5473e20e9e92af94cec15 255 Gene3D G3DSA:3.40.50.1820 3 254 2.2E-66 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_18915 12e6db6554658f5329052c24b3fcad5e 291 Pfam PF00950 ABC 3 transport family 23 285 2.9E-55 T 12-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 M634_18915 12e6db6554658f5329052c24b3fcad5e 291 Gene3D G3DSA:1.10.3470.10 77 287 6.6E-9 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M634_18915 12e6db6554658f5329052c24b3fcad5e 291 SUPERFAMILY SSF81345 15 281 6.02E-33 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M634_19740 acb47135adbff831fec070006a5baa6a 204 SUPERFAMILY SSF56925 21 204 5.23E-26 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel M634_19740 acb47135adbff831fec070006a5baa6a 204 Pfam PF01389 OmpA-like transmembrane domain 22 204 5.5E-23 T 12-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 M634_19740 acb47135adbff831fec070006a5baa6a 204 Gene3D G3DSA:2.40.160.20 5 204 6.3E-39 T 12-10-2018 M634_19295 1a952791dad1debd4f3777477963233b 239 SUPERFAMILY SSF51069 22 237 6.54E-75 T 12-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily M634_19295 1a952791dad1debd4f3777477963233b 239 Pfam PF00194 Eukaryotic-type carbonic anhydrase 22 238 7.7E-51 T 12-10-2018 IPR001148 Alpha carbonic anhydrase domain M634_19295 1a952791dad1debd4f3777477963233b 239 SMART SM01057 23 239 5.8E-95 T 12-10-2018 IPR001148 Alpha carbonic anhydrase domain M634_19295 1a952791dad1debd4f3777477963233b 239 ProSitePatterns PS00162 Alpha-carbonic anhydrases signature. 110 126 - T 12-10-2018 IPR018338 Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117|Reactome: R-HSA-1475029 M634_19295 1a952791dad1debd4f3777477963233b 239 Gene3D G3DSA:3.10.200.10 22 238 3.9E-82 T 12-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily M634_17790 9142664a3a99e7ccf9d2d130e0795bc3 476 SUPERFAMILY SSF55874 336 475 3.01E-26 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_17790 9142664a3a99e7ccf9d2d130e0795bc3 476 SMART SM00387 372 476 2.1E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_17790 9142664a3a99e7ccf9d2d130e0795bc3 476 Gene3D G3DSA:1.10.287.130 226 332 2.3E-14 T 12-10-2018 M634_17790 9142664a3a99e7ccf9d2d130e0795bc3 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 455 1.5E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_17790 9142664a3a99e7ccf9d2d130e0795bc3 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 420 1.5E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_17790 9142664a3a99e7ccf9d2d130e0795bc3 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 434 1.5E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_17790 9142664a3a99e7ccf9d2d130e0795bc3 476 Gene3D G3DSA:3.30.565.10 333 475 5.9E-25 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_17790 9142664a3a99e7ccf9d2d130e0795bc3 476 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 373 475 6.9E-15 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_17790 9142664a3a99e7ccf9d2d130e0795bc3 476 SUPERFAMILY SSF47384 259 311 1.18E-8 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M634_23805 b257796809e9660a1f1cf73a79bc9c55 219 SUPERFAMILY SSF103088 103 215 5.1E-30 T 12-10-2018 IPR036737 OmpA-like domain superfamily M634_23805 b257796809e9660a1f1cf73a79bc9c55 219 Pfam PF00691 OmpA family 115 209 1.9E-17 T 12-10-2018 IPR006665 OmpA-like domain M634_23805 b257796809e9660a1f1cf73a79bc9c55 219 PRINTS PR01021 OMPA domain signature 145 160 1.3E-7 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M634_23805 b257796809e9660a1f1cf73a79bc9c55 219 PRINTS PR01021 OMPA domain signature 115 137 1.3E-7 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M634_23805 b257796809e9660a1f1cf73a79bc9c55 219 PRINTS PR01021 OMPA domain signature 160 176 1.3E-7 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M634_23805 b257796809e9660a1f1cf73a79bc9c55 219 Gene3D G3DSA:3.30.1330.60 77 218 1.3E-30 T 12-10-2018 IPR036737 OmpA-like domain superfamily M634_00495 a9eca5c07815f68eddef8adca1c38e60 141 Gene3D G3DSA:1.10.10.10 1 136 9.4E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_00495 a9eca5c07815f68eddef8adca1c38e60 141 SUPERFAMILY SSF46785 2 131 7.8E-31 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_00495 a9eca5c07815f68eddef8adca1c38e60 141 Pfam PF02082 Transcriptional regulator 1 81 1.7E-23 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type M634_00495 a9eca5c07815f68eddef8adca1c38e60 141 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 128 1.6E-36 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type M634_00495 a9eca5c07815f68eddef8adca1c38e60 141 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 12-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site M634_00495 a9eca5c07815f68eddef8adca1c38e60 141 Hamap MF_01177 HTH-type transcriptional repressor NsrR [nsrR]. 1 141 44.711 T 12-10-2018 IPR023761 Transcriptional repressor HTH, NsrR GO:0045892 M634_17215 ba4b2b652b3945e7ab17acd5de029c65 360 Gene3D G3DSA:3.30.750.140 217 332 9.0E-22 T 12-10-2018 IPR038610 FliK-like, C-terminal domain superfamily M634_17215 ba4b2b652b3945e7ab17acd5de029c65 360 Pfam PF02120 Flagellar hook-length control protein FliK 241 320 5.3E-20 T 12-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal M634_14520 c0b05929f5d38700ef3c4aff5498310b 459 Gene3D G3DSA:3.30.230.10 328 459 6.0E-17 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M634_14520 c0b05929f5d38700ef3c4aff5498310b 459 PRINTS PR01874 DNA repair protein radA signature 176 200 7.0E-94 T 12-10-2018 M634_14520 c0b05929f5d38700ef3c4aff5498310b 459 PRINTS PR01874 DNA repair protein radA signature 324 347 7.0E-94 T 12-10-2018 M634_14520 c0b05929f5d38700ef3c4aff5498310b 459 PRINTS PR01874 DNA repair protein radA signature 85 113 7.0E-94 T 12-10-2018 M634_14520 c0b05929f5d38700ef3c4aff5498310b 459 PRINTS PR01874 DNA repair protein radA signature 215 243 7.0E-94 T 12-10-2018 M634_14520 c0b05929f5d38700ef3c4aff5498310b 459 PRINTS PR01874 DNA repair protein radA signature 10 34 7.0E-94 T 12-10-2018 M634_14520 c0b05929f5d38700ef3c4aff5498310b 459 PRINTS PR01874 DNA repair protein radA signature 126 143 7.0E-94 T 12-10-2018 M634_14520 c0b05929f5d38700ef3c4aff5498310b 459 PRINTS PR01874 DNA repair protein radA signature 250 276 7.0E-94 T 12-10-2018 M634_14520 c0b05929f5d38700ef3c4aff5498310b 459 SUPERFAMILY SSF54211 257 456 4.17E-43 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M634_14520 c0b05929f5d38700ef3c4aff5498310b 459 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 453 2.2E-225 T 12-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 M634_14520 c0b05929f5d38700ef3c4aff5498310b 459 Gene3D G3DSA:3.40.50.300 68 281 3.0E-37 T 12-10-2018 M634_14520 c0b05929f5d38700ef3c4aff5498310b 459 SMART SM00382 93 246 5.5E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_14520 c0b05929f5d38700ef3c4aff5498310b 459 Hamap MF_01498 DNA repair protein RadA [radA]. 21 457 43.11 T 12-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 M634_14520 c0b05929f5d38700ef3c4aff5498310b 459 Pfam PF13481 AAA domain 85 224 5.4E-13 T 12-10-2018 M634_14520 c0b05929f5d38700ef3c4aff5498310b 459 Pfam PF13541 Subunit ChlI of Mg-chelatase 347 432 1.5E-9 T 12-10-2018 M634_14520 c0b05929f5d38700ef3c4aff5498310b 459 SUPERFAMILY SSF52540 70 294 2.66E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_23905 61f68d3b20e76c07316ed748dd39e6f0 323 SUPERFAMILY SSF56935 22 323 3.0E-49 T 12-10-2018 M634_23905 61f68d3b20e76c07316ed748dd39e6f0 323 Pfam PF13609 Gram-negative porin 11 293 6.7E-27 T 12-10-2018 M634_23905 61f68d3b20e76c07316ed748dd39e6f0 323 Gene3D G3DSA:2.40.160.10 22 323 2.5E-60 T 12-10-2018 IPR023614 Porin domain superfamily M634_17385 f3a2925611de202fef558dac813103a6 487 Gene3D G3DSA:1.10.10.60 166 276 3.7E-23 T 12-10-2018 M634_17385 f3a2925611de202fef558dac813103a6 487 SMART SM00342 184 266 7.6E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_17385 f3a2925611de202fef558dac813103a6 487 Gene3D G3DSA:2.60.40.2440 283 382 2.7E-9 T 12-10-2018 IPR038175 CBM21 domain superfamily GO:0005515 M634_17385 f3a2925611de202fef558dac813103a6 487 Pfam PF12833 Helix-turn-helix domain 191 268 5.0E-16 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_17385 f3a2925611de202fef558dac813103a6 487 SUPERFAMILY SSF46689 221 271 2.02E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_18275 31351b0270ee6a29d0e4cd12ebbd045b 257 Pfam PF17131 Outer membrane lipoprotein-sorting protein 76 250 3.1E-37 T 12-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein M634_18275 31351b0270ee6a29d0e4cd12ebbd045b 257 Gene3D G3DSA:2.50.20.10 23 251 3.0E-39 T 12-10-2018 M634_18275 31351b0270ee6a29d0e4cd12ebbd045b 257 PIRSF PIRSF028205 1 254 1.4E-116 T 12-10-2018 IPR011220 Uncharacterised conserved protein UCP028205 M634_18595 86597dac6130cd80159931b29e1eb207 170 Gene3D G3DSA:3.40.220.10 1 170 1.0E-60 T 12-10-2018 M634_18595 86597dac6130cd80159931b29e1eb207 170 SUPERFAMILY SSF52949 4 168 3.7E-52 T 12-10-2018 M634_18595 86597dac6130cd80159931b29e1eb207 170 SMART SM00506 3 136 5.7E-49 T 12-10-2018 IPR002589 Macro domain M634_18595 86597dac6130cd80159931b29e1eb207 170 Pfam PF01661 Macro domain 20 136 7.8E-38 T 12-10-2018 IPR002589 Macro domain M634_13890 f76ec64fbf1fda4ad97d52a83d61c238 114 SMART SM00938 6 107 7.9E-70 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 M634_13890 f76ec64fbf1fda4ad97d52a83d61c238 114 Pfam PF00543 Nitrogen regulatory protein P-II 6 107 1.1E-44 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 M634_13890 f76ec64fbf1fda4ad97d52a83d61c238 114 PRINTS PR00340 P-II protein signature 25 43 4.1E-44 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 M634_13890 f76ec64fbf1fda4ad97d52a83d61c238 114 PRINTS PR00340 P-II protein signature 85 105 4.1E-44 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 M634_13890 f76ec64fbf1fda4ad97d52a83d61c238 114 PRINTS PR00340 P-II protein signature 54 77 4.1E-44 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 M634_13890 f76ec64fbf1fda4ad97d52a83d61c238 114 PRINTS PR00340 P-II protein signature 4 19 4.1E-44 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 M634_13890 f76ec64fbf1fda4ad97d52a83d61c238 114 Gene3D G3DSA:3.30.70.120 1 114 3.0E-49 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal M634_13890 f76ec64fbf1fda4ad97d52a83d61c238 114 ProSitePatterns PS00638 P-II protein C-terminal region signature. 85 98 - T 12-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 M634_13890 f76ec64fbf1fda4ad97d52a83d61c238 114 ProSitePatterns PS00496 P-II protein uridylation site. 48 53 - T 12-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 M634_13890 f76ec64fbf1fda4ad97d52a83d61c238 114 SUPERFAMILY SSF54913 3 114 2.1E-47 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta M634_13890 f76ec64fbf1fda4ad97d52a83d61c238 114 PIRSF PIRSF039144 3 114 2.8E-58 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 M634_11260 5467c0337b26c44c4c60e1d1b834efd1 505 PIRSF PIRSF001394 1 505 1.2E-217 T 12-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 M634_11260 5467c0337b26c44c4c60e1d1b834efd1 505 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 325 487 1.8E-51 T 12-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 M634_11260 5467c0337b26c44c4c60e1d1b834efd1 505 SUPERFAMILY SSF117457 317 489 4.84E-64 T 12-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 M634_11260 5467c0337b26c44c4c60e1d1b834efd1 505 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 3.4E-98 T 12-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 M634_11260 5467c0337b26c44c4c60e1d1b834efd1 505 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 284 3.8E-63 T 12-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 M634_11260 5467c0337b26c44c4c60e1d1b834efd1 505 Pfam PF05683 Fumarase C-terminus 289 490 3.5E-84 T 12-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 M634_11260 5467c0337b26c44c4c60e1d1b834efd1 505 Gene3D G3DSA:3.20.130.10 305 490 1.3E-62 T 12-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 M634_21000 07275419eaa23b793d03e4f6aea95636 394 TIGRFAM TIGR03415 ABC_choXWV_ATP: choline ABC transporter, ATP-binding protein 4 386 1.7E-179 T 12-10-2018 IPR022473 ABC transporter, Choline, ATP-binding subunit GO:0015220|GO:0015871|GO:0055052 M634_21000 07275419eaa23b793d03e4f6aea95636 394 SMART SM00382 52 253 3.7E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_21000 07275419eaa23b793d03e4f6aea95636 394 SUPERFAMILY SSF54631 332 388 7.86E-6 T 12-10-2018 M634_21000 07275419eaa23b793d03e4f6aea95636 394 SUPERFAMILY SSF52540 42 273 1.79E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_21000 07275419eaa23b793d03e4f6aea95636 394 Gene3D G3DSA:3.40.50.300 30 336 4.7E-69 T 12-10-2018 M634_21000 07275419eaa23b793d03e4f6aea95636 394 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_21000 07275419eaa23b793d03e4f6aea95636 394 Pfam PF00005 ABC transporter 43 195 1.6E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_24300 51d0d5e31adf69e0baee96f91d054d84 485 Pfam PF11840 Protein of unknown function (DUF3360) 2 484 2.4E-267 T 12-10-2018 IPR021794 Protein of unknown function DUF3360 M634_21915 89afde36aa69f5cc7ca80b3306c5e8ee 306 Gene3D G3DSA:1.10.10.10 11 98 7.3E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_21915 89afde36aa69f5cc7ca80b3306c5e8ee 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 71 5.4E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_21915 89afde36aa69f5cc7ca80b3306c5e8ee 306 Gene3D G3DSA:3.40.190.290 100 299 9.3E-40 T 12-10-2018 M634_21915 89afde36aa69f5cc7ca80b3306c5e8ee 306 Pfam PF03466 LysR substrate binding domain 97 300 4.7E-26 T 12-10-2018 IPR005119 LysR, substrate-binding M634_21915 89afde36aa69f5cc7ca80b3306c5e8ee 306 SUPERFAMILY SSF53850 100 303 1.61E-27 T 12-10-2018 M634_21915 89afde36aa69f5cc7ca80b3306c5e8ee 306 SUPERFAMILY SSF46785 11 95 3.48E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_08410 5282c18b163bdf0a87c5ec5e3b0bfb70 124 Hamap MF_01144 UPF0299 membrane protein YohJ [yohJ]. 5 124 21.816 T 12-10-2018 IPR022957 Uncharacterised protein family UPF0299 M634_08410 5282c18b163bdf0a87c5ec5e3b0bfb70 124 Pfam PF03788 LrgA family 25 115 1.0E-24 T 12-10-2018 IPR005538 LrgA/CidA family GO:0016021 M634_15010 b8df48dca97c125b41bcb2e154ea98b7 204 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 184 3.3E-67 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 M634_15010 b8df48dca97c125b41bcb2e154ea98b7 204 SUPERFAMILY SSF52540 1 193 5.94E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_15010 b8df48dca97c125b41bcb2e154ea98b7 204 Gene3D G3DSA:3.40.50.300 1 204 6.1E-69 T 12-10-2018 M634_15010 b8df48dca97c125b41bcb2e154ea98b7 204 Pfam PF01121 Dephospho-CoA kinase 3 179 1.6E-72 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 M634_15010 b8df48dca97c125b41bcb2e154ea98b7 204 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 197 27.989 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 M634_04320 41e81743940b1d274fb5a1ddf60b15a8 319 Pfam PF04055 Radical SAM superfamily 43 202 2.2E-18 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 M634_04320 41e81743940b1d274fb5a1ddf60b15a8 319 Gene3D G3DSA:3.80.30.20 42 274 6.3E-18 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe M634_04320 41e81743940b1d274fb5a1ddf60b15a8 319 SUPERFAMILY SSF102114 13 268 1.01E-50 T 12-10-2018 M634_04320 41e81743940b1d274fb5a1ddf60b15a8 319 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 299 3.5E-135 T 12-10-2018 IPR005911 Protein YhcC-like GO:0051536 M634_04320 41e81743940b1d274fb5a1ddf60b15a8 319 SMART SM00729 23 247 8.1E-48 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 M634_04320 41e81743940b1d274fb5a1ddf60b15a8 319 Pfam PF16199 Radical_SAM C-terminal domain 209 279 3.1E-17 T 12-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 M634_15450 c3162a48d74510672cec175826275a3f 265 Pfam PF09955 Predicted integral membrane protein (DUF2189) 82 195 9.0E-28 T 12-10-2018 IPR018692 Predicted integral membrane protein DUF2189 M634_13010 8566bbcfed3f696657e91b7a02f9a8ff 131 SUPERFAMILY SSF54593 2 127 1.75E-29 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M634_13010 8566bbcfed3f696657e91b7a02f9a8ff 131 Gene3D G3DSA:3.10.180.10 1 129 3.9E-35 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M634_13010 8566bbcfed3f696657e91b7a02f9a8ff 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 123 1.3E-17 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain M634_04575 42bbb553a7f72323ecbe1513192beb2e 494 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 328 437 1.9E-21 T 12-10-2018 IPR025299 CstA, C-terminal domain M634_04575 42bbb553a7f72323ecbe1513192beb2e 494 Pfam PF02554 Carbon starvation protein CstA 4 144 5.4E-33 T 12-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 M634_14945 f57769e97919f1ac713def7bb3d4134d 222 SMART SM00947 30 192 1.3E-66 T 12-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 M634_14945 f57769e97919f1ac713def7bb3d4134d 222 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 12-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 M634_14945 f57769e97919f1ac713def7bb3d4134d 222 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 12-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 M634_14945 f57769e97919f1ac713def7bb3d4134d 222 SUPERFAMILY SSF53056 2 212 1.83E-74 T 12-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 M634_14945 f57769e97919f1ac713def7bb3d4134d 222 Pfam PF00484 Carbonic anhydrase 38 188 7.3E-50 T 12-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 M634_14945 f57769e97919f1ac713def7bb3d4134d 222 Gene3D G3DSA:3.40.1050.10 1 222 1.8E-90 T 12-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 M634_21315 27b39e65b196cfa5a2b8dc0d1d6e4665 141 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 99 4.9E-18 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain M634_21315 27b39e65b196cfa5a2b8dc0d1d6e4665 141 Gene3D G3DSA:3.40.140.10 1 133 2.3E-41 T 12-10-2018 M634_21315 27b39e65b196cfa5a2b8dc0d1d6e4665 141 SUPERFAMILY SSF53927 2 137 2.66E-41 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 M634_21315 27b39e65b196cfa5a2b8dc0d1d6e4665 141 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 49 87 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 M634_10115 9419a7ed36795d4c9da5deae93b02583 146 Pfam PF05099 Tellurite resistance protein TerB 15 143 7.7E-37 T 12-10-2018 IPR007791 Co-chaperone DjlA, N-terminal M634_10115 9419a7ed36795d4c9da5deae93b02583 146 Gene3D G3DSA:1.10.3680.10 2 139 1.5E-17 T 12-10-2018 IPR029024 TerB-like M634_10115 9419a7ed36795d4c9da5deae93b02583 146 SUPERFAMILY SSF158682 2 144 1.83E-27 T 12-10-2018 IPR029024 TerB-like M634_05430 a0146b7018fb18f8c01ec36850c3a3cf 181 Pfam PF07348 Syd protein (SUKH-2) 7 178 7.5E-70 T 12-10-2018 IPR009948 Syd GO:0009898 M634_05430 a0146b7018fb18f8c01ec36850c3a3cf 181 Hamap MF_01104 Protein Syd [syd]. 3 181 36.251 T 12-10-2018 IPR009948 Syd GO:0009898 M634_05430 a0146b7018fb18f8c01ec36850c3a3cf 181 Gene3D G3DSA:3.40.1580.20 1 181 1.9E-68 T 12-10-2018 IPR038228 Syd superfamily M634_08400 9e0b41c1130d1e81eaefe6745f43b528 295 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 29 292 4.5E-99 T 12-10-2018 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 M634_08400 9e0b41c1130d1e81eaefe6745f43b528 295 PIRSF PIRSF006334 14 295 8.6E-110 T 12-10-2018 M634_08400 9e0b41c1130d1e81eaefe6745f43b528 295 Hamap MF_01558 Cytidine deaminase [cdd]. 1 293 49.888 T 12-10-2018 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 M634_08400 9e0b41c1130d1e81eaefe6745f43b528 295 Gene3D G3DSA:3.40.140.10 180 295 3.4E-27 T 12-10-2018 M634_08400 9e0b41c1130d1e81eaefe6745f43b528 295 SUPERFAMILY SSF53927 152 287 2.8E-38 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 M634_08400 9e0b41c1130d1e81eaefe6745f43b528 295 Gene3D G3DSA:3.40.140.10 29 179 1.0E-43 T 12-10-2018 M634_08400 9e0b41c1130d1e81eaefe6745f43b528 295 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 277 1.2E-41 T 12-10-2018 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 M634_08400 9e0b41c1130d1e81eaefe6745f43b528 295 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 60 142 5.0E-12 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain M634_08400 9e0b41c1130d1e81eaefe6745f43b528 295 SUPERFAMILY SSF53927 1 146 1.02E-40 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 M634_08400 9e0b41c1130d1e81eaefe6745f43b528 295 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 M634_16565 aae5bc568d5dbc6e59151d77963b5b6a 486 Pfam PF00199 Catalase 7 387 2.7E-190 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M634_16565 aae5bc568d5dbc6e59151d77963b5b6a 486 PIRSF PIRSF038928 1 479 2.1E-222 T 12-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M634_16565 aae5bc568d5dbc6e59151d77963b5b6a 486 Pfam PF06628 Catalase-related immune-responsive 416 474 4.6E-21 T 12-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M634_16565 aae5bc568d5dbc6e59151d77963b5b6a 486 ProSitePatterns PS00438 Catalase proximal active site signature. 43 59 - T 12-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M634_16565 aae5bc568d5dbc6e59151d77963b5b6a 486 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 333 341 - T 12-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M634_16565 aae5bc568d5dbc6e59151d77963b5b6a 486 PRINTS PR00067 Catalase signature 320 346 1.2E-72 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M634_16565 aae5bc568d5dbc6e59151d77963b5b6a 486 PRINTS PR00067 Catalase signature 20 43 1.2E-72 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M634_16565 aae5bc568d5dbc6e59151d77963b5b6a 486 PRINTS PR00067 Catalase signature 123 141 1.2E-72 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M634_16565 aae5bc568d5dbc6e59151d77963b5b6a 486 PRINTS PR00067 Catalase signature 83 101 1.2E-72 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M634_16565 aae5bc568d5dbc6e59151d77963b5b6a 486 PRINTS PR00067 Catalase signature 104 121 1.2E-72 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M634_16565 aae5bc568d5dbc6e59151d77963b5b6a 486 PRINTS PR00067 Catalase signature 288 315 1.2E-72 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M634_16565 aae5bc568d5dbc6e59151d77963b5b6a 486 SUPERFAMILY SSF56634 3 479 6.15E-215 T 12-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M634_16565 aae5bc568d5dbc6e59151d77963b5b6a 486 SMART SM01060 7 391 1.4E-287 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 M634_16565 aae5bc568d5dbc6e59151d77963b5b6a 486 Gene3D G3DSA:2.40.180.10 2 482 9.8E-231 T 12-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 M634_12350 a8d3d5a3da87268d84c2f69fe8fb3f37 226 Pfam PF02224 Cytidylate kinase 8 221 2.7E-78 T 12-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 M634_12350 a8d3d5a3da87268d84c2f69fe8fb3f37 226 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 34.446 T 12-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 M634_12350 a8d3d5a3da87268d84c2f69fe8fb3f37 226 Gene3D G3DSA:3.40.50.300 1 226 1.7E-82 T 12-10-2018 M634_12350 a8d3d5a3da87268d84c2f69fe8fb3f37 226 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 3.1E-85 T 12-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 M634_12350 a8d3d5a3da87268d84c2f69fe8fb3f37 226 SUPERFAMILY SSF52540 6 223 1.31E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_06575 77a540e853b80fb3b851240fba2a4fb5 445 Pfam PF00072 Response regulator receiver domain 4 114 5.6E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_06575 77a540e853b80fb3b851240fba2a4fb5 445 SUPERFAMILY SSF52540 144 373 1.02E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_06575 77a540e853b80fb3b851240fba2a4fb5 445 SUPERFAMILY SSF52172 2 188 8.82E-39 T 12-10-2018 IPR011006 CheY-like superfamily M634_06575 77a540e853b80fb3b851240fba2a4fb5 445 Gene3D G3DSA:3.40.50.300 140 314 4.0E-59 T 12-10-2018 M634_06575 77a540e853b80fb3b851240fba2a4fb5 445 Pfam PF02954 Bacterial regulatory protein, Fis family 397 437 7.4E-9 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M634_06575 77a540e853b80fb3b851240fba2a4fb5 445 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M634_06575 77a540e853b80fb3b851240fba2a4fb5 445 Gene3D G3DSA:3.40.50.2300 1 130 3.0E-35 T 12-10-2018 M634_06575 77a540e853b80fb3b851240fba2a4fb5 445 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 168 181 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M634_06575 77a540e853b80fb3b851240fba2a4fb5 445 Gene3D G3DSA:1.10.8.60 315 379 7.4E-21 T 12-10-2018 M634_06575 77a540e853b80fb3b851240fba2a4fb5 445 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site M634_06575 77a540e853b80fb3b851240fba2a4fb5 445 Gene3D G3DSA:1.10.10.60 386 442 1.0E-14 T 12-10-2018 M634_06575 77a540e853b80fb3b851240fba2a4fb5 445 SMART SM00382 164 307 3.2E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_06575 77a540e853b80fb3b851240fba2a4fb5 445 Pfam PF00158 Sigma-54 interaction domain 144 310 2.1E-69 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 M634_06575 77a540e853b80fb3b851240fba2a4fb5 445 SUPERFAMILY SSF46689 391 440 1.05E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_06575 77a540e853b80fb3b851240fba2a4fb5 445 SMART SM00448 2 114 2.4E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_24715 83659b34cbef17f74810e0dfe3cab637 229 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 56 75 2.4E-30 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M634_24715 83659b34cbef17f74810e0dfe3cab637 229 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 161 181 2.4E-30 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M634_24715 83659b34cbef17f74810e0dfe3cab637 229 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 17 36 2.4E-30 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M634_24715 83659b34cbef17f74810e0dfe3cab637 229 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 206 229 2.4E-30 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M634_24715 83659b34cbef17f74810e0dfe3cab637 229 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 182 203 2.4E-30 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M634_24715 83659b34cbef17f74810e0dfe3cab637 229 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 36 56 2.4E-30 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M634_24715 83659b34cbef17f74810e0dfe3cab637 229 Pfam PF00813 FliP family 19 228 5.4E-47 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 M634_10560 b0c2eb091d784b4b8e1f9d17c07c5f0d 166 Gene3D G3DSA:3.40.630.30 3 166 4.5E-31 T 12-10-2018 M634_10560 b0c2eb091d784b4b8e1f9d17c07c5f0d 166 Pfam PF13420 Acetyltransferase (GNAT) domain 5 161 2.1E-13 T 12-10-2018 M634_10560 b0c2eb091d784b4b8e1f9d17c07c5f0d 166 SUPERFAMILY SSF55729 3 165 7.32E-28 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_04375 585a6e7b730b25048f5e0ba0972f6488 125 Gene3D G3DSA:3.20.70.20 47 125 1.5E-25 T 12-10-2018 M634_04375 585a6e7b730b25048f5e0ba0972f6488 125 Pfam PF01228 Glycine radical 15 106 3.2E-23 T 12-10-2018 IPR001150 Glycine radical domain GO:0003824 M634_04375 585a6e7b730b25048f5e0ba0972f6488 125 ProSitePatterns PS00850 Glycine radical domain signature. 95 103 - T 12-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site M634_04375 585a6e7b730b25048f5e0ba0972f6488 125 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 125 41.409 T 12-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA M634_04375 585a6e7b730b25048f5e0ba0972f6488 125 PIRSF PIRSF000378 2 125 4.0E-54 T 12-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA M634_04375 585a6e7b730b25048f5e0ba0972f6488 125 SUPERFAMILY SSF51998 64 124 1.01E-23 T 12-10-2018 M634_04375 585a6e7b730b25048f5e0ba0972f6488 125 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 125 1.5E-68 T 12-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA M634_01585 9cb7a19c70fcc3d5bd23bd28b9f80d6e 586 SUPERFAMILY SSF56235 43 585 5.02E-178 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal M634_01585 9cb7a19c70fcc3d5bd23bd28b9f80d6e 586 Pfam PF01019 Gamma-glutamyltranspeptidase 66 581 1.5E-164 T 12-10-2018 M634_01585 9cb7a19c70fcc3d5bd23bd28b9f80d6e 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 148 166 2.2E-67 T 12-10-2018 M634_01585 9cb7a19c70fcc3d5bd23bd28b9f80d6e 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 298 317 2.2E-67 T 12-10-2018 M634_01585 9cb7a19c70fcc3d5bd23bd28b9f80d6e 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 166 185 2.2E-67 T 12-10-2018 M634_01585 9cb7a19c70fcc3d5bd23bd28b9f80d6e 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 429 447 2.2E-67 T 12-10-2018 M634_01585 9cb7a19c70fcc3d5bd23bd28b9f80d6e 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 489 506 2.2E-67 T 12-10-2018 M634_01585 9cb7a19c70fcc3d5bd23bd28b9f80d6e 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 268 284 2.2E-67 T 12-10-2018 M634_01585 9cb7a19c70fcc3d5bd23bd28b9f80d6e 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 73 98 2.2E-67 T 12-10-2018 M634_01585 9cb7a19c70fcc3d5bd23bd28b9f80d6e 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 407 425 2.2E-67 T 12-10-2018 M634_01585 9cb7a19c70fcc3d5bd23bd28b9f80d6e 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 465 480 2.2E-67 T 12-10-2018 M634_01585 9cb7a19c70fcc3d5bd23bd28b9f80d6e 586 Gene3D G3DSA:3.60.20.40 407 586 6.4E-59 T 12-10-2018 M634_01585 9cb7a19c70fcc3d5bd23bd28b9f80d6e 586 Gene3D G3DSA:1.10.246.130 284 406 1.5E-39 T 12-10-2018 M634_01585 9cb7a19c70fcc3d5bd23bd28b9f80d6e 586 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 52 578 1.0E-139 T 12-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 M634_09845 387205274ae6586a7736ffb465896e31 239 Pfam PF00005 ABC transporter 25 165 1.1E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_09845 387205274ae6586a7736ffb465896e31 239 Gene3D G3DSA:3.40.50.300 1 237 2.8E-51 T 12-10-2018 M634_09845 387205274ae6586a7736ffb465896e31 239 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_09845 387205274ae6586a7736ffb465896e31 239 SUPERFAMILY SSF52540 5 216 5.33E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_09845 387205274ae6586a7736ffb465896e31 239 SMART SM00382 29 202 9.3E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_01960 629f83048d8fae13f24ef83182c5e9d3 300 Gene3D G3DSA:3.40.190.290 93 276 2.9E-12 T 12-10-2018 M634_01960 629f83048d8fae13f24ef83182c5e9d3 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 8.0E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_01960 629f83048d8fae13f24ef83182c5e9d3 300 SUPERFAMILY SSF53850 90 291 9.77E-24 T 12-10-2018 M634_01960 629f83048d8fae13f24ef83182c5e9d3 300 SUPERFAMILY SSF46785 6 87 3.21E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_01960 629f83048d8fae13f24ef83182c5e9d3 300 Pfam PF03466 LysR substrate binding domain 90 287 3.6E-19 T 12-10-2018 IPR005119 LysR, substrate-binding M634_01960 629f83048d8fae13f24ef83182c5e9d3 300 Gene3D G3DSA:1.10.10.10 1 89 3.7E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_17960 1d9de1ec9b85486308dcf3c385156598 327 Gene3D G3DSA:3.40.190.170 29 327 3.3E-108 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily M634_17960 1d9de1ec9b85486308dcf3c385156598 327 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 32 309 1.5E-88 T 12-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 M634_17960 1d9de1ec9b85486308dcf3c385156598 327 PIRSF PIRSF006470 1 326 8.9E-96 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 M634_17960 1d9de1ec9b85486308dcf3c385156598 327 SUPERFAMILY SSF53850 137 276 1.15E-9 T 12-10-2018 M634_17960 1d9de1ec9b85486308dcf3c385156598 327 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 32 285 4.0E-81 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 M634_07945 35da596861e259dae0677a199ecb88c6 235 SUPERFAMILY SSF55729 79 229 7.5E-16 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_07945 35da596861e259dae0677a199ecb88c6 235 Gene3D G3DSA:3.40.630.30 44 232 1.9E-16 T 12-10-2018 M634_07945 35da596861e259dae0677a199ecb88c6 235 Pfam PF13673 Acetyltransferase (GNAT) domain 130 231 1.6E-9 T 12-10-2018 IPR000182 GNAT domain M634_04160 0c045c7748906b02c6f5c3c4e6a23cb0 105 Hamap MF_00910 Cell division protein FtsL [ftsL]. 19 102 16.111 T 12-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 M634_04160 0c045c7748906b02c6f5c3c4e6a23cb0 105 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 23 102 2.9E-25 T 12-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 M634_04160 0c045c7748906b02c6f5c3c4e6a23cb0 105 Pfam PF04999 Cell division protein FtsL 8 103 8.7E-36 T 12-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 M634_15215 d28c37bdf883460d6f65223cd48fae4d 158 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 35.984 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 M634_15215 d28c37bdf883460d6f65223cd48fae4d 158 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 12-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 M634_15215 d28c37bdf883460d6f65223cd48fae4d 158 Pfam PF02542 YgbB family 2 155 1.6E-65 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 M634_15215 d28c37bdf883460d6f65223cd48fae4d 158 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 157 1.6E-68 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 M634_15215 d28c37bdf883460d6f65223cd48fae4d 158 Gene3D G3DSA:3.30.1330.50 1 158 1.0E-69 T 12-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 M634_15215 d28c37bdf883460d6f65223cd48fae4d 158 SUPERFAMILY SSF69765 1 157 1.07E-65 T 12-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 M634_07980 27854c910f3f0f850c81ee806f1da274 233 Gene3D G3DSA:3.30.70.1560 127 210 7.7E-56 T 12-10-2018 M634_07980 27854c910f3f0f850c81ee806f1da274 233 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 98 112 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 M634_07980 27854c910f3f0f850c81ee806f1da274 233 SUPERFAMILY SSF55174 1 85 1.05E-14 T 12-10-2018 M634_07980 27854c910f3f0f850c81ee806f1da274 233 Pfam PF01479 S4 domain 1 46 1.0E-11 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_07980 27854c910f3f0f850c81ee806f1da274 233 Gene3D G3DSA:3.10.290.10 1 61 8.8E-17 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 M634_07980 27854c910f3f0f850c81ee806f1da274 233 Pfam PF00849 RNA pseudouridylate synthase 61 193 1.3E-18 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 M634_07980 27854c910f3f0f850c81ee806f1da274 233 Gene3D G3DSA:3.30.70.580 62 228 7.7E-56 T 12-10-2018 M634_07980 27854c910f3f0f850c81ee806f1da274 233 SMART SM00363 1 59 2.7E-11 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_07980 27854c910f3f0f850c81ee806f1da274 233 SUPERFAMILY SSF55120 60 228 2.88E-43 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 M634_07980 27854c910f3f0f850c81ee806f1da274 233 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 225 2.8E-48 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 M634_06295 819da753b651d9df5e5d72a29e24d065 758 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 9 687 6.2E-180 T 12-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 M634_06295 819da753b651d9df5e5d72a29e24d065 758 SUPERFAMILY SSF52540 4 193 2.06E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_06295 819da753b651d9df5e5d72a29e24d065 758 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.4E-5 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M634_06295 819da753b651d9df5e5d72a29e24d065 758 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 53 68 2.4E-5 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M634_06295 819da753b651d9df5e5d72a29e24d065 758 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.4E-5 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M634_06295 819da753b651d9df5e5d72a29e24d065 758 Gene3D G3DSA:3.40.50.300 3 200 6.2E-44 T 12-10-2018 M634_06295 819da753b651d9df5e5d72a29e24d065 758 Pfam PF02421 Ferrous iron transport protein B 4 161 6.7E-59 T 12-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 M634_06295 819da753b651d9df5e5d72a29e24d065 758 Pfam PF07670 Nucleoside recognition 349 440 2.1E-13 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 M634_06295 819da753b651d9df5e5d72a29e24d065 758 Pfam PF07670 Nucleoside recognition 509 690 2.9E-37 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 M634_06295 819da753b651d9df5e5d72a29e24d065 758 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 156 2.6E-13 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 M634_06295 819da753b651d9df5e5d72a29e24d065 758 Pfam PF07664 Ferrous iron transport protein B C terminus 452 504 9.5E-19 T 12-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 M634_08975 0ed30a3857a6c27c590bdf2120678843 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 M634_08975 0ed30a3857a6c27c590bdf2120678843 506 Pfam PF00171 Aldehyde dehydrogenase family 27 493 6.6E-166 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 M634_08975 0ed30a3857a6c27c590bdf2120678843 506 Gene3D G3DSA:3.40.605.10 23 492 3.2E-165 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 M634_08975 0ed30a3857a6c27c590bdf2120678843 506 Gene3D G3DSA:3.40.309.10 266 464 3.2E-165 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 M634_08975 0ed30a3857a6c27c590bdf2120678843 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 M634_08975 0ed30a3857a6c27c590bdf2120678843 506 SUPERFAMILY SSF53720 13 497 3.01E-162 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 M634_22415 ce748d199549b4d1fdbeeaa06c386775 103 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 3 103 1.7E-39 T 12-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 M634_22415 ce748d199549b4d1fdbeeaa06c386775 103 Pfam PF01253 Translation initiation factor SUI1 27 96 1.9E-19 T 12-10-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 M634_22415 ce748d199549b4d1fdbeeaa06c386775 103 SUPERFAMILY SSF55159 3 99 5.89E-27 T 12-10-2018 IPR036877 SUI1 domain superfamily GO:0003743|GO:0006413 M634_22415 ce748d199549b4d1fdbeeaa06c386775 103 PIRSF PIRSF037511 1 103 1.2E-32 T 12-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 M634_22415 ce748d199549b4d1fdbeeaa06c386775 103 Gene3D G3DSA:3.30.780.10 23 103 2.6E-33 T 12-10-2018 M634_20595 29904e6b3e7064a535ba0ce3bf9fb015 409 PIRSF PIRSF037215 1 408 1.3E-182 T 12-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 M634_20595 29904e6b3e7064a535ba0ce3bf9fb015 409 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 M634_20595 29904e6b3e7064a535ba0ce3bf9fb015 409 TIGRFAM TIGR01882 peptidase-T: peptidase T 3 406 8.2E-162 T 12-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 M634_20595 29904e6b3e7064a535ba0ce3bf9fb015 409 SUPERFAMILY SSF55031 209 320 2.09E-39 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain M634_20595 29904e6b3e7064a535ba0ce3bf9fb015 409 SUPERFAMILY SSF53187 1 406 4.98E-81 T 12-10-2018 M634_20595 29904e6b3e7064a535ba0ce3bf9fb015 409 Gene3D G3DSA:3.40.630.10 4 400 4.4E-174 T 12-10-2018 M634_20595 29904e6b3e7064a535ba0ce3bf9fb015 409 Pfam PF01546 Peptidase family M20/M25/M40 139 401 5.9E-12 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 M634_20595 29904e6b3e7064a535ba0ce3bf9fb015 409 Gene3D G3DSA:3.30.70.360 209 319 4.4E-174 T 12-10-2018 M634_20595 29904e6b3e7064a535ba0ce3bf9fb015 409 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 177 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 M634_20595 29904e6b3e7064a535ba0ce3bf9fb015 409 Pfam PF07687 Peptidase dimerisation domain 206 303 1.1E-9 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain M634_20595 29904e6b3e7064a535ba0ce3bf9fb015 409 Hamap MF_00550 Peptidase T [pepT]. 1 404 57.752 T 12-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 M634_16070 415b99b9d80099edb30c9e808fb73bd3 481 PIRSF PIRSF028153 1 481 6.7E-237 T 12-10-2018 IPR016871 MSHA biogenesis protein, MshI M634_16070 415b99b9d80099edb30c9e808fb73bd3 481 SUPERFAMILY SSF53067 40 154 2.85E-11 T 12-10-2018 M634_20685 0b5aab6c56feb3f9aaca0835c5119c14 276 SMART SM00450 5 128 5.3E-15 T 12-10-2018 IPR001763 Rhodanese-like domain M634_20685 0b5aab6c56feb3f9aaca0835c5119c14 276 SMART SM00450 152 272 9.4E-16 T 12-10-2018 IPR001763 Rhodanese-like domain M634_20685 0b5aab6c56feb3f9aaca0835c5119c14 276 SUPERFAMILY SSF52821 156 275 7.73E-33 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M634_20685 0b5aab6c56feb3f9aaca0835c5119c14 276 Gene3D G3DSA:3.40.250.10 158 276 6.2E-40 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M634_20685 0b5aab6c56feb3f9aaca0835c5119c14 276 SUPERFAMILY SSF52821 3 135 5.11E-31 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M634_20685 0b5aab6c56feb3f9aaca0835c5119c14 276 Pfam PF00581 Rhodanese-like domain 157 268 4.8E-12 T 12-10-2018 IPR001763 Rhodanese-like domain M634_20685 0b5aab6c56feb3f9aaca0835c5119c14 276 Pfam PF00581 Rhodanese-like domain 6 124 6.8E-12 T 12-10-2018 IPR001763 Rhodanese-like domain M634_20685 0b5aab6c56feb3f9aaca0835c5119c14 276 Gene3D G3DSA:3.40.250.10 1 143 2.0E-37 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M634_17980 443199635c053cd9b0235a03a0bb1b6b 470 Gene3D G3DSA:3.20.20.140 7 466 6.7E-201 T 12-10-2018 M634_17980 443199635c053cd9b0235a03a0bb1b6b 470 Gene3D G3DSA:1.10.2020.10 46 137 6.7E-201 T 12-10-2018 M634_17980 443199635c053cd9b0235a03a0bb1b6b 470 SUPERFAMILY SSF51556 2 466 1.53E-181 T 12-10-2018 IPR032466 Metal-dependent hydrolase M634_17980 443199635c053cd9b0235a03a0bb1b6b 470 Pfam PF02614 Glucuronate isomerase 1 466 1.2E-228 T 12-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 M634_17980 443199635c053cd9b0235a03a0bb1b6b 470 Hamap MF_00675 Uronate isomerase [uxaC]. 2 468 49.965 T 12-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 M634_04290 3af8ee8d36d4fb12254a084e265064f1 231 Gene3D G3DSA:3.40.50.1580 1 231 4.5E-71 T 12-10-2018 M634_04290 3af8ee8d36d4fb12254a084e265064f1 231 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 230 47.898 T 12-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 M634_04290 3af8ee8d36d4fb12254a084e265064f1 231 Pfam PF01048 Phosphorylase superfamily 2 227 4.9E-49 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 M634_04290 3af8ee8d36d4fb12254a084e265064f1 231 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 227 1.3E-99 T 12-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 M634_04290 3af8ee8d36d4fb12254a084e265064f1 231 SUPERFAMILY SSF53167 1 229 9.69E-74 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 M634_13815 78938dc7cb4dcdc48ed3b1a0c425f833 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 2 208 2.9E-92 T 12-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 M634_13815 78938dc7cb4dcdc48ed3b1a0c425f833 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.65 T 12-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 M634_13815 78938dc7cb4dcdc48ed3b1a0c425f833 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 5.3E-65 T 12-10-2018 M634_13815 78938dc7cb4dcdc48ed3b1a0c425f833 208 SUPERFAMILY SSF53271 3 206 3.28E-67 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like M634_13815 78938dc7cb4dcdc48ed3b1a0c425f833 208 Gene3D G3DSA:3.40.50.2020 1 208 4.0E-74 T 12-10-2018 M634_21370 af9500682dd959e3606e8dc1304eeb24 617 Gene3D G3DSA:3.30.2010.10 94 188 3.8E-32 T 12-10-2018 M634_21370 af9500682dd959e3606e8dc1304eeb24 617 Pfam PF01435 Peptidase family M48 104 329 7.3E-28 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 M634_10095 42c094d56812c1ecc5884e308c9f36f2 815 Gene3D G3DSA:3.40.50.740 414 621 5.3E-52 T 12-10-2018 M634_10095 42c094d56812c1ecc5884e308c9f36f2 815 Gene3D G3DSA:2.40.40.20 665 812 2.7E-39 T 12-10-2018 M634_10095 42c094d56812c1ecc5884e308c9f36f2 815 SUPERFAMILY SSF53706 51 692 6.67E-175 T 12-10-2018 M634_10095 42c094d56812c1ecc5884e308c9f36f2 815 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 9 808 0.0 T 12-10-2018 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 M634_10095 42c094d56812c1ecc5884e308c9f36f2 815 Gene3D G3DSA:3.40.50.740 49 322 4.7E-81 T 12-10-2018 M634_10095 42c094d56812c1ecc5884e308c9f36f2 815 SMART SM00926 50 110 2.4E-12 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M634_10095 42c094d56812c1ecc5884e308c9f36f2 815 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 50 110 2.4E-16 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M634_10095 42c094d56812c1ecc5884e308c9f36f2 815 SUPERFAMILY SSF50692 636 806 2.9E-35 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily M634_10095 42c094d56812c1ecc5884e308c9f36f2 815 Pfam PF01568 Molydopterin dinucleotide binding domain 690 801 7.5E-25 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 M634_10095 42c094d56812c1ecc5884e308c9f36f2 815 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 726 753 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 M634_10095 42c094d56812c1ecc5884e308c9f36f2 815 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 511 528 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 M634_10095 42c094d56812c1ecc5884e308c9f36f2 815 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 55 73 - T 12-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 M634_10095 42c094d56812c1ecc5884e308c9f36f2 815 Pfam PF00384 Molybdopterin oxidoreductase 113 570 1.5E-97 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M634_10095 42c094d56812c1ecc5884e308c9f36f2 815 Gene3D G3DSA:3.40.228.10 341 413 1.6E-17 T 12-10-2018 M634_19225 3eab85371a5081ea8a60cc8e48c90d51 380 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 237 363 34.988 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 M634_19225 3eab85371a5081ea8a60cc8e48c90d51 380 Gene3D G3DSA:3.30.1060.10 26 210 2.6E-62 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 M634_19225 3eab85371a5081ea8a60cc8e48c90d51 380 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 41 192 1.2E-51 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 M634_19225 3eab85371a5081ea8a60cc8e48c90d51 380 Pfam PF01641 SelR domain 244 362 5.4E-46 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 M634_19225 3eab85371a5081ea8a60cc8e48c90d51 380 Gene3D G3DSA:2.170.150.20 233 380 1.6E-55 T 12-10-2018 M634_19225 3eab85371a5081ea8a60cc8e48c90d51 380 SUPERFAMILY SSF55068 32 205 1.83E-71 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 M634_19225 3eab85371a5081ea8a60cc8e48c90d51 380 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 40 199 35.526 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 M634_19225 3eab85371a5081ea8a60cc8e48c90d51 380 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 238 371 6.4E-58 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 M634_19225 3eab85371a5081ea8a60cc8e48c90d51 380 SUPERFAMILY SSF51316 239 379 1.73E-58 T 12-10-2018 IPR011057 Mss4-like superfamily M634_19225 3eab85371a5081ea8a60cc8e48c90d51 380 Pfam PF01625 Peptide methionine sulfoxide reductase 43 193 7.2E-57 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 M634_20260 e6fc40be8ce654451eeedf43a9097dee 551 SUPERFAMILY SSF53649 351 539 3.92E-16 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 M634_20260 e6fc40be8ce654451eeedf43a9097dee 551 Pfam PF08019 Domain of unknown function (DUF1705) 58 211 1.0E-51 T 12-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 M634_20260 e6fc40be8ce654451eeedf43a9097dee 551 Gene3D G3DSA:3.40.720.10 217 551 3.6E-85 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 M634_20260 e6fc40be8ce654451eeedf43a9097dee 551 Pfam PF00884 Sulfatase 242 532 2.2E-44 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 M634_01620 9d636ecd81d324437099a6dc55728d5d 151 Pfam PF07681 DoxX 27 108 9.3E-18 T 12-10-2018 IPR032808 DoxX family M634_21955 50b7cb5f87c58ebecd0953ec36ec1751 141 Gene3D G3DSA:3.10.450.50 28 141 9.7E-25 T 12-10-2018 M634_21955 50b7cb5f87c58ebecd0953ec36ec1751 141 Pfam PF14534 Domain of unknown function (DUF4440) 29 132 2.7E-10 T 12-10-2018 IPR027843 Domain of unknown function DUF4440 M634_21955 50b7cb5f87c58ebecd0953ec36ec1751 141 SUPERFAMILY SSF54427 25 140 5.86E-21 T 12-10-2018 IPR032710 NTF2-like domain superfamily M634_18290 2d6c834dd13fc11f0aeb8b96dd271fc9 263 SUPERFAMILY SSF52172 4 155 2.13E-28 T 12-10-2018 IPR011006 CheY-like superfamily M634_18290 2d6c834dd13fc11f0aeb8b96dd271fc9 263 Pfam PF04397 LytTr DNA-binding domain 165 262 2.6E-26 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 M634_18290 2d6c834dd13fc11f0aeb8b96dd271fc9 263 Pfam PF00072 Response regulator receiver domain 8 116 7.5E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_18290 2d6c834dd13fc11f0aeb8b96dd271fc9 263 SMART SM00850 164 263 1.0E-21 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 M634_18290 2d6c834dd13fc11f0aeb8b96dd271fc9 263 Gene3D G3DSA:3.40.50.2300 2 138 5.0E-30 T 12-10-2018 M634_18290 2d6c834dd13fc11f0aeb8b96dd271fc9 263 SMART SM00448 5 117 6.3E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_18290 2d6c834dd13fc11f0aeb8b96dd271fc9 263 Gene3D G3DSA:2.40.50.40 156 229 3.7E-9 T 12-10-2018 M634_21120 344308d1989534ef0b4b0b609637cabe 292 Gene3D G3DSA:3.40.50.2300 29 278 9.3E-98 T 12-10-2018 M634_21120 344308d1989534ef0b4b0b609637cabe 292 Gene3D G3DSA:3.40.50.2300 125 259 9.3E-98 T 12-10-2018 M634_21120 344308d1989534ef0b4b0b609637cabe 292 Pfam PF13407 Periplasmic binding protein domain 28 278 5.8E-61 T 12-10-2018 IPR025997 Periplasmic binding protein M634_21120 344308d1989534ef0b4b0b609637cabe 292 SUPERFAMILY SSF53822 6 292 1.8E-87 T 12-10-2018 IPR028082 Periplasmic binding protein-like I M634_04190 53bdb271ad4b661972b10e636b32399f 398 Pfam PF01098 Cell cycle protein 26 381 1.3E-113 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M634_04190 53bdb271ad4b661972b10e636b32399f 398 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 24 380 7.4E-129 T 12-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M634_04190 53bdb271ad4b661972b10e636b32399f 398 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 22 390 41.489 T 12-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M634_04190 53bdb271ad4b661972b10e636b32399f 398 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 339 363 - T 12-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M634_21935 102cc314bc95e1f2d8f7e5c9d1f98e6b 86 Gene3D G3DSA:1.20.120.1930 1 86 5.3E-38 T 12-10-2018 M634_21935 102cc314bc95e1f2d8f7e5c9d1f98e6b 86 Pfam PF16691 Domain of unknown function (DUF5062) 6 86 5.0E-30 T 12-10-2018 IPR032036 Protein of unknown function DUF5062 M634_18545 aafb167ec31466b9c76e96a84f737ead 206 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 9 192 5.3E-25 T 12-10-2018 M634_18545 aafb167ec31466b9c76e96a84f737ead 206 Gene3D G3DSA:3.40.50.1000 9 196 8.4E-31 T 12-10-2018 IPR023214 HAD superfamily M634_18545 aafb167ec31466b9c76e96a84f737ead 206 SUPERFAMILY SSF56784 7 195 4.52E-22 T 12-10-2018 IPR036412 HAD-like superfamily M634_18545 aafb167ec31466b9c76e96a84f737ead 206 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 9 195 3.5E-33 T 12-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like M634_18545 aafb167ec31466b9c76e96a84f737ead 206 Gene3D G3DSA:1.20.1440.100 21 93 8.4E-31 T 12-10-2018 M634_18545 aafb167ec31466b9c76e96a84f737ead 206 Pfam PF12710 haloacid dehalogenase-like hydrolase 10 190 8.7E-31 T 12-10-2018 M634_06905 417174a219d638a31e795d9f4394a0e8 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 413 8.0E-157 T 12-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 M634_06905 417174a219d638a31e795d9f4394a0e8 414 Pfam PF12704 MacB-like periplasmic core domain 30 241 1.6E-13 T 12-10-2018 IPR025857 MacB-like periplasmic core domain M634_06905 417174a219d638a31e795d9f4394a0e8 414 Pfam PF02687 FtsX-like permease family 301 407 4.7E-12 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 M634_06905 417174a219d638a31e795d9f4394a0e8 414 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 4 414 1.0E-214 T 12-10-2018 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0016021|GO:0042953|GO:0042954|GO:0044874 M634_04855 b529e9240565ccf23b3edc724e246146 315 Pfam PF07549 SecD/SecF GG Motif 35 60 1.1E-10 T 12-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site M634_04855 b529e9240565ccf23b3edc724e246146 315 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 117 282 3.1E-56 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial M634_04855 b529e9240565ccf23b3edc724e246146 315 SUPERFAMILY SSF82866 74 293 2.22E-41 T 12-10-2018 M634_04855 b529e9240565ccf23b3edc724e246146 315 Gene3D G3DSA:1.20.1640.10 105 300 5.0E-12 T 12-10-2018 M634_04855 b529e9240565ccf23b3edc724e246146 315 Pfam PF02355 Protein export membrane protein 111 292 4.2E-71 T 12-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial M634_04855 b529e9240565ccf23b3edc724e246146 315 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 39 285 2.9E-86 T 12-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 M634_04855 b529e9240565ccf23b3edc724e246146 315 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 11 296 28.889 T 12-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 M634_04855 b529e9240565ccf23b3edc724e246146 315 PRINTS PR01755 Bacterial translocase SecF protein signature 233 248 3.9E-32 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial M634_04855 b529e9240565ccf23b3edc724e246146 315 PRINTS PR01755 Bacterial translocase SecF protein signature 38 53 3.9E-32 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial M634_04855 b529e9240565ccf23b3edc724e246146 315 PRINTS PR01755 Bacterial translocase SecF protein signature 201 219 3.9E-32 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial M634_04855 b529e9240565ccf23b3edc724e246146 315 PRINTS PR01755 Bacterial translocase SecF protein signature 153 167 3.9E-32 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial M634_11715 6ab88acc48967f4d91e37238c3e15125 221 SUPERFAMILY SSF56925 40 184 9.16E-19 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel M634_11715 6ab88acc48967f4d91e37238c3e15125 221 Pfam PF13505 Outer membrane protein beta-barrel domain 19 183 2.2E-11 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel M634_11715 6ab88acc48967f4d91e37238c3e15125 221 Gene3D G3DSA:2.40.160.20 36 189 5.7E-13 T 12-10-2018 M634_00560 c1aeab424169dbb0484a4472c18f64c3 375 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 189 200 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M634_00560 c1aeab424169dbb0484a4472c18f64c3 375 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 10 344 1.8E-153 T 12-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 M634_00560 c1aeab424169dbb0484a4472c18f64c3 375 Pfam PF08331 Domain of unknown function (DUF1730) 58 136 3.3E-23 T 12-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 M634_00560 c1aeab424169dbb0484a4472c18f64c3 375 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 3 311 50.999 T 12-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 M634_00560 c1aeab424169dbb0484a4472c18f64c3 375 Pfam PF13484 4Fe-4S double cluster binding domain 188 252 1.7E-19 T 12-10-2018 M634_00560 c1aeab424169dbb0484a4472c18f64c3 375 SUPERFAMILY SSF54862 165 315 1.67E-19 T 12-10-2018 M634_08185 f7d013bf41ec41fb17acae98ed8362e0 244 Pfam PF02698 DUF218 domain 61 200 8.0E-22 T 12-10-2018 IPR003848 Domain of unknown function DUF218 M634_03105 e7f925b5c5e53f77d1c064285cc1b15c 126 SUPERFAMILY SSF56784 1 109 2.99E-27 T 12-10-2018 IPR036412 HAD-like superfamily M634_03105 e7f925b5c5e53f77d1c064285cc1b15c 126 Pfam PF08282 haloacid dehalogenase-like hydrolase 4 69 3.9E-7 T 12-10-2018 M634_03105 e7f925b5c5e53f77d1c064285cc1b15c 126 Gene3D G3DSA:3.40.50.1000 1 126 7.9E-45 T 12-10-2018 IPR023214 HAD superfamily M634_03105 e7f925b5c5e53f77d1c064285cc1b15c 126 TIGRFAM TIGR01689 EcbF-BcbF: capsule biosynthesis phosphatase 1 126 1.6E-67 T 12-10-2018 IPR010039 Capsule biosynthesis phosphatase M634_24580 85c10562e1b559e9b6752677cb55ead1 512 Gene3D G3DSA:3.40.190.10 39 494 1.5E-156 T 12-10-2018 M634_24580 85c10562e1b559e9b6752677cb55ead1 512 PIRSF PIRSF002741 7 494 8.5E-80 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 M634_24580 85c10562e1b559e9b6752677cb55ead1 512 SUPERFAMILY SSF53850 22 510 1.3E-95 T 12-10-2018 M634_24580 85c10562e1b559e9b6752677cb55ead1 512 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 66 410 1.4E-64 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain M634_24580 85c10562e1b559e9b6752677cb55ead1 512 Gene3D G3DSA:3.10.105.10 246 482 1.5E-156 T 12-10-2018 M634_09795 ce0d75b6fee79230e1ac615be9315c6f 553 Pfam PF00037 4Fe-4S binding domain 446 466 2.0E-5 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M634_09795 ce0d75b6fee79230e1ac615be9315c6f 553 Pfam PF00037 4Fe-4S binding domain 419 435 1.5E-4 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M634_09795 ce0d75b6fee79230e1ac615be9315c6f 553 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 451 462 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M634_09795 ce0d75b6fee79230e1ac615be9315c6f 553 SUPERFAMILY SSF54862 143 504 5.12E-38 T 12-10-2018 M634_09795 ce0d75b6fee79230e1ac615be9315c6f 553 Pfam PF12838 4Fe-4S dicluster domain 185 231 9.8E-9 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M634_09795 ce0d75b6fee79230e1ac615be9315c6f 553 Gene3D G3DSA:3.30.70.20 171 254 8.2E-12 T 12-10-2018 M634_09795 ce0d75b6fee79230e1ac615be9315c6f 553 Gene3D G3DSA:3.30.70.20 413 482 2.1E-11 T 12-10-2018 M634_13245 dc42c054362c314ced3c83ddb35b9e1d 146 Pfam PF03692 Putative zinc- or iron-chelating domain 23 91 1.2E-8 T 12-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein M634_13245 dc42c054362c314ced3c83ddb35b9e1d 146 PIRSF PIRSF006173 1 144 9.4E-66 T 12-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 M634_13245 dc42c054362c314ced3c83ddb35b9e1d 146 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 1 144 41.286 T 12-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 M634_24415 4583289f0a5fea50fd753935abf8f70c 54 Pfam PF01679 Proteolipid membrane potential modulator 6 52 2.4E-20 T 12-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 M634_24415 4583289f0a5fea50fd753935abf8f70c 54 ProSitePatterns PS01309 Uncharacterized protein family UPF0057 signature. 10 25 - T 12-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 M634_09755 5f36170b82f7a712f7daba987b5e3ac3 1456 Gene3D G3DSA:2.180.10.10 685 1131 6.0E-41 T 12-10-2018 M634_09755 5f36170b82f7a712f7daba987b5e3ac3 1456 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1057 1130 4.2E-27 T 12-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 M634_09755 5f36170b82f7a712f7daba987b5e3ac3 1456 Pfam PF03527 RHS protein 1029 1063 6.4E-13 T 12-10-2018 IPR001826 RHS protein M634_09755 5f36170b82f7a712f7daba987b5e3ac3 1456 PRINTS PR00394 RHS protein signature 1076 1096 9.7E-12 T 12-10-2018 IPR001826 RHS protein M634_09755 5f36170b82f7a712f7daba987b5e3ac3 1456 PRINTS PR00394 RHS protein signature 1023 1043 9.7E-12 T 12-10-2018 IPR001826 RHS protein M634_09755 5f36170b82f7a712f7daba987b5e3ac3 1456 PRINTS PR00394 RHS protein signature 1099 1118 9.7E-12 T 12-10-2018 IPR001826 RHS protein M634_09755 5f36170b82f7a712f7daba987b5e3ac3 1456 Gene3D G3DSA:3.90.930.1 414 571 1.6E-11 T 12-10-2018 M634_09755 5f36170b82f7a712f7daba987b5e3ac3 1456 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 463 500 5.8E-6 T 12-10-2018 IPR006530 YD repeat M634_09755 5f36170b82f7a712f7daba987b5e3ac3 1456 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 421 461 4.3E-5 T 12-10-2018 IPR006530 YD repeat M634_09755 5f36170b82f7a712f7daba987b5e3ac3 1456 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 505 546 0.0028 T 12-10-2018 IPR006530 YD repeat M634_09755 5f36170b82f7a712f7daba987b5e3ac3 1456 Pfam PF05593 RHS Repeat 422 447 3.1E-5 T 12-10-2018 IPR031325 RHS repeat M634_18485 381231a976ffa477c413c5752d8ae4cc 267 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 9 233 1.5E-23 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 M634_18485 381231a976ffa477c413c5752d8ae4cc 267 SUPERFAMILY SSF56784 5 264 1.81E-66 T 12-10-2018 IPR036412 HAD-like superfamily M634_18485 381231a976ffa477c413c5752d8ae4cc 267 Pfam PF08282 haloacid dehalogenase-like hydrolase 9 260 2.1E-61 T 12-10-2018 M634_18485 381231a976ffa477c413c5752d8ae4cc 267 Gene3D G3DSA:3.40.50.1000 9 260 2.0E-78 T 12-10-2018 IPR023214 HAD superfamily M634_18485 381231a976ffa477c413c5752d8ae4cc 267 Gene3D G3DSA:3.30.1240.10 85 190 2.0E-78 T 12-10-2018 M634_18485 381231a976ffa477c413c5752d8ae4cc 267 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 9 260 1.7E-51 T 12-10-2018 IPR000150 Cof family GO:0016787 M634_08495 c5bc6fd4496cc8bb745ba898e0f5ee6d 76 Gene3D G3DSA:3.40.30.10 2 75 2.1E-16 T 12-10-2018 M634_08495 c5bc6fd4496cc8bb745ba898e0f5ee6d 76 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 12-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 M634_08495 c5bc6fd4496cc8bb745ba898e0f5ee6d 76 Pfam PF00462 Glutaredoxin 4 60 5.2E-12 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 M634_08495 c5bc6fd4496cc8bb745ba898e0f5ee6d 76 SUPERFAMILY SSF52833 2 71 4.09E-14 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M634_09060 a1646c6d48d381b70c556fc28e1a04f9 387 Gene3D G3DSA:1.10.3290.10 74 387 4.4E-125 T 12-10-2018 IPR036597 Fido-like domain superfamily M634_09060 a1646c6d48d381b70c556fc28e1a04f9 387 SUPERFAMILY SSF140931 264 372 1.57E-6 T 12-10-2018 IPR036597 Fido-like domain superfamily M634_09060 a1646c6d48d381b70c556fc28e1a04f9 387 Pfam PF02661 Fic/DOC family 278 362 5.6E-5 T 12-10-2018 IPR003812 Fido domain M634_21180 b49e1ddf27033506bb5faaf0328ddfa2 328 SUPERFAMILY SSF46689 279 327 2.72E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_21180 b49e1ddf27033506bb5faaf0328ddfa2 328 Gene3D G3DSA:1.10.10.60 277 328 1.3E-12 T 12-10-2018 M634_21180 b49e1ddf27033506bb5faaf0328ddfa2 328 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 280 322 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 M634_21180 b49e1ddf27033506bb5faaf0328ddfa2 328 SUPERFAMILY SSF46689 226 277 4.39E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_21180 b49e1ddf27033506bb5faaf0328ddfa2 328 SMART SM00342 243 326 1.9E-25 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_21180 b49e1ddf27033506bb5faaf0328ddfa2 328 Gene3D G3DSA:1.10.10.60 219 276 2.6E-14 T 12-10-2018 M634_21180 b49e1ddf27033506bb5faaf0328ddfa2 328 Pfam PF12833 Helix-turn-helix domain 249 327 1.0E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_07820 a23fbe3041a8b3574c535e9a7699885e 309 SUPERFAMILY SSF53474 28 305 8.25E-48 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_07820 a23fbe3041a8b3574c535e9a7699885e 309 Pfam PF00561 alpha/beta hydrolase fold 33 186 1.3E-15 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 M634_07820 a23fbe3041a8b3574c535e9a7699885e 309 Gene3D G3DSA:3.40.50.1820 26 309 5.8E-88 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_10330 f7bfbf1b80c02975d12960c9fc726dc7 295 SUPERFAMILY SSF103481 194 271 3.27E-6 T 12-10-2018 M634_10330 f7bfbf1b80c02975d12960c9fc726dc7 295 Pfam PF00892 EamA-like transporter family 140 275 1.4E-10 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M634_10330 f7bfbf1b80c02975d12960c9fc726dc7 295 Pfam PF00892 EamA-like transporter family 3 126 6.5E-14 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M634_10330 f7bfbf1b80c02975d12960c9fc726dc7 295 SUPERFAMILY SSF103481 41 123 3.14E-7 T 12-10-2018 M634_15225 bb6a90c009c5f6ae351f3bc642bc32eb 93 Pfam PF04977 Septum formation initiator 11 89 1.0E-29 T 12-10-2018 IPR007060 Septum formation initiator FtsL/DivIC M634_15225 bb6a90c009c5f6ae351f3bc642bc32eb 93 Gene3D G3DSA:1.20.5.400 22 63 6.5E-13 T 12-10-2018 M634_15225 bb6a90c009c5f6ae351f3bc642bc32eb 93 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 37.013 T 12-10-2018 IPR023081 Cell division protein FtsB M634_09895 b9564f4c940d40bddb544ca4e9d64c5b 137 Gene3D G3DSA:3.90.79.10 4 134 6.1E-13 T 12-10-2018 M634_09895 b9564f4c940d40bddb544ca4e9d64c5b 137 Pfam PF00293 NUDIX domain 8 78 4.3E-8 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 M634_09895 b9564f4c940d40bddb544ca4e9d64c5b 137 SUPERFAMILY SSF55811 5 116 1.62E-15 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 M634_17585 a91ea7af06562bfe8f4092d01f5ff5fb 204 SUPERFAMILY SSF52833 43 195 5.48E-36 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M634_17585 a91ea7af06562bfe8f4092d01f5ff5fb 204 Pfam PF02630 SCO1/SenC 27 177 5.7E-30 T 12-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_17585 a91ea7af06562bfe8f4092d01f5ff5fb 204 Gene3D G3DSA:3.40.30.10 25 198 9.7E-36 T 12-10-2018 M634_09665 d4a8fa70e072b8993060b9fb82f01dc7 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 203 222 5.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 M634_09665 d4a8fa70e072b8993060b9fb82f01dc7 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 91 104 5.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 M634_09665 d4a8fa70e072b8993060b9fb82f01dc7 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 5.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 M634_09665 d4a8fa70e072b8993060b9fb82f01dc7 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 75 89 5.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 M634_09665 d4a8fa70e072b8993060b9fb82f01dc7 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 166 185 5.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 M634_09665 d4a8fa70e072b8993060b9fb82f01dc7 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 122 138 5.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 M634_09665 d4a8fa70e072b8993060b9fb82f01dc7 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 247 266 5.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 M634_09665 d4a8fa70e072b8993060b9fb82f01dc7 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 5.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 M634_09665 d4a8fa70e072b8993060b9fb82f01dc7 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 148 162 5.3E-69 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 M634_09665 d4a8fa70e072b8993060b9fb82f01dc7 343 Pfam PF13416 Bacterial extracellular solute-binding protein 42 300 3.3E-37 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein M634_09665 d4a8fa70e072b8993060b9fb82f01dc7 343 SUPERFAMILY SSF53850 26 340 4.78E-85 T 12-10-2018 M634_09665 d4a8fa70e072b8993060b9fb82f01dc7 343 PIRSF PIRSF019574 1 343 2.0E-109 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 M634_09665 d4a8fa70e072b8993060b9fb82f01dc7 343 Gene3D G3DSA:3.40.190.10 132 335 8.4E-107 T 12-10-2018 M634_09665 d4a8fa70e072b8993060b9fb82f01dc7 343 Gene3D G3DSA:3.40.190.10 32 306 8.4E-107 T 12-10-2018 M634_20880 68628345a9a254cff9828aba77768077 473 Gene3D G3DSA:3.40.640.10 143 362 2.8E-96 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_20880 68628345a9a254cff9828aba77768077 473 SMART SM00345 9 68 4.5E-13 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_20880 68628345a9a254cff9828aba77768077 473 Gene3D G3DSA:1.10.10.10 3 69 2.9E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_20880 68628345a9a254cff9828aba77768077 473 Pfam PF00155 Aminotransferase class I and II 149 448 1.9E-35 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 M634_20880 68628345a9a254cff9828aba77768077 473 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 68 7.1E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_20880 68628345a9a254cff9828aba77768077 473 SUPERFAMILY SSF46785 4 70 1.39E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_20880 68628345a9a254cff9828aba77768077 473 SUPERFAMILY SSF53383 96 467 1.05E-92 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_20880 68628345a9a254cff9828aba77768077 473 Gene3D G3DSA:3.90.1150.10 100 467 2.8E-96 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M634_08055 b2b789bbc50a684f75cd6e23e1842e50 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.4E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M634_08055 b2b789bbc50a684f75cd6e23e1842e50 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.4E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M634_08055 b2b789bbc50a684f75cd6e23e1842e50 208 SUPERFAMILY SSF46689 3 75 1.8E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_08055 b2b789bbc50a684f75cd6e23e1842e50 208 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 54 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site M634_08055 b2b789bbc50a684f75cd6e23e1842e50 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 1.1E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M634_08055 b2b789bbc50a684f75cd6e23e1842e50 208 Gene3D G3DSA:1.10.357.10 2 208 2.5E-53 T 12-10-2018 M634_08055 b2b789bbc50a684f75cd6e23e1842e50 208 SUPERFAMILY SSF48498 80 207 6.23E-40 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily M634_09185 9a61bdc3b94ca8dd624c25b5fea60504 334 Pfam PF05844 YopD protein 97 331 1.4E-37 T 12-10-2018 IPR008898 YopD-like M634_24425 8c872bb10af0821bd42543ddca0c6cf3 301 Pfam PF05661 Protein of unknown function (DUF808) 4 291 2.5E-113 T 12-10-2018 IPR008526 Inner membrane protein YedI M634_24425 8c872bb10af0821bd42543ddca0c6cf3 301 PIRSF PIRSF016660 1 301 1.5E-119 T 12-10-2018 IPR008526 Inner membrane protein YedI M634_00835 d18d573f80f5c763eb35195354eeea8f 435 PIRSF PIRSF004539 1 435 6.4E-177 T 12-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 M634_00835 d18d573f80f5c763eb35195354eeea8f 435 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 367 1.6E-145 T 12-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 M634_00835 d18d573f80f5c763eb35195354eeea8f 435 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 434 8.3E-180 T 12-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 M634_16620 25d2a3baab3c336ee20ad4afc2240900 681 Pfam PF02378 Phosphotransferase system, EIIC 37 330 5.3E-15 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 M634_16620 25d2a3baab3c336ee20ad4afc2240900 681 SUPERFAMILY SSF141868 439 677 1.23E-64 T 12-10-2018 IPR035919 EAL domain superfamily M634_16620 25d2a3baab3c336ee20ad4afc2240900 681 Pfam PF00563 EAL domain 441 670 5.7E-57 T 12-10-2018 IPR001633 EAL domain M634_16620 25d2a3baab3c336ee20ad4afc2240900 681 SMART SM00052 433 675 4.9E-53 T 12-10-2018 IPR001633 EAL domain M634_16620 25d2a3baab3c336ee20ad4afc2240900 681 Gene3D G3DSA:3.20.20.450 433 679 2.5E-65 T 12-10-2018 IPR035919 EAL domain superfamily M634_12865 523cc49164674873ea66a8ecce6df97a 212 Pfam PF01914 MarC family integral membrane protein 8 208 6.7E-64 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 M634_12865 523cc49164674873ea66a8ecce6df97a 212 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 3 204 4.4E-66 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 M634_00800 dc30ddc17fcb6a05492928751820b20f 170 Gene3D G3DSA:1.20.120.1490 37 154 4.6E-27 T 12-10-2018 M634_00800 dc30ddc17fcb6a05492928751820b20f 170 PIRSF PIRSF034445 1 163 4.6E-20 T 12-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 M634_00800 dc30ddc17fcb6a05492928751820b20f 170 Pfam PF07813 LTXXQ motif family protein 39 149 2.3E-25 T 12-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 M634_12505 9270af88d9aba8c6fa0acf0f154debf0 315 SUPERFAMILY SSF55174 19 71 3.79E-9 T 12-10-2018 M634_12505 9270af88d9aba8c6fa0acf0f154debf0 315 Pfam PF00849 RNA pseudouridylate synthase 102 247 5.5E-31 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 M634_12505 9270af88d9aba8c6fa0acf0f154debf0 315 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 311 8.6E-93 T 12-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 M634_12505 9270af88d9aba8c6fa0acf0f154debf0 315 SUPERFAMILY SSF55120 91 307 1.01E-63 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 M634_12505 9270af88d9aba8c6fa0acf0f154debf0 315 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 141 155 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 M634_12505 9270af88d9aba8c6fa0acf0f154debf0 315 Gene3D G3DSA:3.10.290.10 7 76 3.2E-17 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 M634_12505 9270af88d9aba8c6fa0acf0f154debf0 315 Pfam PF01479 S4 domain 20 66 2.9E-10 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_12505 9270af88d9aba8c6fa0acf0f154debf0 315 SMART SM00363 20 77 1.6E-8 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_12505 9270af88d9aba8c6fa0acf0f154debf0 315 Gene3D G3DSA:3.30.2350.10 93 315 1.2E-78 T 12-10-2018 M634_13750 996c442513bc0629ade129cb2598ab92 67 Pfam PF11446 Protein of unknown function (DUF2897) 5 54 8.2E-22 T 12-10-2018 IPR021550 Protein of unknown function DUF2897 M634_11735 88919a22b2d156969ae36d943335cdcf 523 ProSitePatterns PS01303 BCCT family of transporters signature. 336 345 - T 12-10-2018 IPR018093 BCCT transporter, conserved site M634_11735 88919a22b2d156969ae36d943335cdcf 523 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 73 521 2.5E-136 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 M634_11735 88919a22b2d156969ae36d943335cdcf 523 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 33 520 3.4E-173 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 M634_16815 fbb496f1723beb4472056a1b8e55caae 84 Pfam PF04728 Lipoprotein leucine-zipper 32 84 9.6E-25 T 12-10-2018 IPR006817 Lipoprotein leucine-zipper GO:0019867 M634_16815 fbb496f1723beb4472056a1b8e55caae 84 Gene3D G3DSA:1.20.5.190 28 83 1.8E-12 T 12-10-2018 M634_16815 fbb496f1723beb4472056a1b8e55caae 84 PIRSF PIRSF002855 1 84 1.9E-31 T 12-10-2018 IPR016367 Murein-lipoprotein M634_16815 fbb496f1723beb4472056a1b8e55caae 84 SUPERFAMILY SSF58042 29 83 3.53E-16 T 12-10-2018 M634_12695 9908c16bcb07faea63fc32b7b9fa3c2d 676 Pfam PF00271 Helicase conserved C-terminal domain 440 545 2.5E-17 T 12-10-2018 IPR001650 Helicase, C-terminal M634_12695 9908c16bcb07faea63fc32b7b9fa3c2d 676 SUPERFAMILY SSF52540 37 584 5.89E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_12695 9908c16bcb07faea63fc32b7b9fa3c2d 676 Gene3D G3DSA:3.40.50.300 1 233 1.2E-72 T 12-10-2018 M634_12695 9908c16bcb07faea63fc32b7b9fa3c2d 676 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 671 42.991 T 12-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 M634_12695 9908c16bcb07faea63fc32b7b9fa3c2d 676 Gene3D G3DSA:3.40.50.300 269 415 4.2E-51 T 12-10-2018 M634_12695 9908c16bcb07faea63fc32b7b9fa3c2d 676 SUPERFAMILY SSF46600 625 672 1.57E-10 T 12-10-2018 IPR036876 UVR domain superfamily M634_12695 9908c16bcb07faea63fc32b7b9fa3c2d 676 Pfam PF02151 UvrB/uvrC motif 636 671 4.5E-8 T 12-10-2018 IPR001943 UVR domain GO:0005515 M634_12695 9908c16bcb07faea63fc32b7b9fa3c2d 676 Pfam PF04851 Type III restriction enzyme, res subunit 13 129 4.2E-9 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 M634_12695 9908c16bcb07faea63fc32b7b9fa3c2d 676 SMART SM00487 9 426 1.0E-27 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M634_12695 9908c16bcb07faea63fc32b7b9fa3c2d 676 SMART SM00490 461 547 2.7E-19 T 12-10-2018 IPR001650 Helicase, C-terminal M634_12695 9908c16bcb07faea63fc32b7b9fa3c2d 676 Pfam PF12344 Ultra-violet resistance protein B 553 595 3.8E-21 T 12-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain M634_12695 9908c16bcb07faea63fc32b7b9fa3c2d 676 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 669 0.0 T 12-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 M634_12695 9908c16bcb07faea63fc32b7b9fa3c2d 676 Gene3D G3DSA:4.10.860.10 618 676 6.0E-19 T 12-10-2018 M634_12695 9908c16bcb07faea63fc32b7b9fa3c2d 676 Gene3D G3DSA:3.40.50.300 416 597 2.5E-50 T 12-10-2018 M634_12695 9908c16bcb07faea63fc32b7b9fa3c2d 676 SUPERFAMILY SSF52540 5 416 7.25E-137 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_12965 3d4795870d738d52f40e969c2a08b043 136 Gene3D G3DSA:2.170.150.20 1 136 2.5E-61 T 12-10-2018 M634_12965 3d4795870d738d52f40e969c2a08b043 136 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 11 134 37.616 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 M634_12965 3d4795870d738d52f40e969c2a08b043 136 Pfam PF01641 SelR domain 14 132 3.8E-54 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 M634_12965 3d4795870d738d52f40e969c2a08b043 136 SUPERFAMILY SSF51316 8 135 3.03E-59 T 12-10-2018 IPR011057 Mss4-like superfamily M634_12965 3d4795870d738d52f40e969c2a08b043 136 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 10 134 9.2E-58 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 M634_13570 19d6e4cea219ab53362db6c43788694c 503 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 2 378 7.2E-86 T 12-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 M634_13570 19d6e4cea219ab53362db6c43788694c 503 Gene3D G3DSA:3.40.50.300 285 471 1.6E-57 T 12-10-2018 M634_13570 19d6e4cea219ab53362db6c43788694c 503 SUPERFAMILY SSF52540 286 477 1.38E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_13570 19d6e4cea219ab53362db6c43788694c 503 Gene3D G3DSA:1.20.120.1380 264 474 1.6E-57 T 12-10-2018 M634_13570 19d6e4cea219ab53362db6c43788694c 503 SMART SM00962 290 483 1.3E-63 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 M634_13570 19d6e4cea219ab53362db6c43788694c 503 SMART SM00382 289 442 7.2E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_13570 19d6e4cea219ab53362db6c43788694c 503 Pfam PF00448 SRP54-type protein, GTPase domain 292 479 2.9E-38 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 M634_00640 6435ba79bd90f18e97a269223d640f27 285 Pfam PF02666 Phosphatidylserine decarboxylase 62 279 7.5E-63 T 12-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 M634_00640 6435ba79bd90f18e97a269223d640f27 285 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 9 285 50.42 T 12-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 M634_00640 6435ba79bd90f18e97a269223d640f27 285 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 48 284 4.1E-88 T 12-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 M634_11785 45b2a4a90e8d3c10f0550aad5a05f6ea 186 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 11 35 1.8E-4 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal M634_11785 45b2a4a90e8d3c10f0550aad5a05f6ea 186 Gene3D G3DSA:3.30.1380.10 68 186 2.9E-10 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 M634_11785 45b2a4a90e8d3c10f0550aad5a05f6ea 186 Pfam PF05951 Bacterial protein of unknown function (DUF882) 39 186 5.5E-67 T 12-10-2018 IPR010275 Protein of unknown function DUF882 M634_11785 45b2a4a90e8d3c10f0550aad5a05f6ea 186 SUPERFAMILY SSF55166 72 186 9.81E-33 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 M634_18155 99dd55dd09199a9d10ee1468193ffcf5 300 SUPERFAMILY SSF53697 8 250 2.67E-73 T 12-10-2018 M634_18155 99dd55dd09199a9d10ee1468193ffcf5 300 Gene3D G3DSA:1.10.8.1080 221 299 1.2E-29 T 12-10-2018 M634_18155 99dd55dd09199a9d10ee1468193ffcf5 300 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 187 204 - T 12-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 M634_18155 99dd55dd09199a9d10ee1468193ffcf5 300 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 4 297 43.879 T 12-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 M634_18155 99dd55dd09199a9d10ee1468193ffcf5 300 Pfam PF01380 SIS domain 129 212 5.3E-8 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 M634_18155 99dd55dd09199a9d10ee1468193ffcf5 300 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 8 297 3.9E-135 T 12-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 M634_18155 99dd55dd09199a9d10ee1468193ffcf5 300 Gene3D G3DSA:3.40.50.10490 1 220 4.7E-83 T 12-10-2018 M634_14140 c685fa5e181f6217b2e906a8f7177593 414 Pfam PF03116 NQR2, RnfD, RnfE family 41 405 6.4E-108 T 12-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 M634_14140 c685fa5e181f6217b2e906a8f7177593 414 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 408 1.4E-204 T 12-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 M634_14140 c685fa5e181f6217b2e906a8f7177593 414 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 412 36.536 T 12-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 M634_14140 c685fa5e181f6217b2e906a8f7177593 414 PIRSF PIRSF016055 1 414 2.0E-200 T 12-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 M634_00380 8ebdc2a8c02a61a877d396676fb814b2 75 Hamap MF_00715 Protein SlyX [slyX]. 8 75 17.684 T 12-10-2018 IPR007236 SlyX M634_00380 8ebdc2a8c02a61a877d396676fb814b2 75 Pfam PF04102 SlyX 9 75 1.6E-24 T 12-10-2018 IPR007236 SlyX M634_00380 8ebdc2a8c02a61a877d396676fb814b2 75 Gene3D G3DSA:1.20.5.300 1 52 8.7E-7 T 12-10-2018 M634_09955 07cda28bb87f23e2945db16199ef88d8 280 ProSitePatterns PS00333 ATP-dependent DNA ligase signature 2. 175 198 - T 12-10-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 M634_09955 07cda28bb87f23e2945db16199ef88d8 280 Pfam PF01068 ATP dependent DNA ligase domain 45 198 8.4E-8 T 12-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 M634_09955 07cda28bb87f23e2945db16199ef88d8 280 SUPERFAMILY SSF50249 173 277 1.31E-30 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_09955 07cda28bb87f23e2945db16199ef88d8 280 SUPERFAMILY SSF56091 22 198 4.32E-42 T 12-10-2018 M634_09955 07cda28bb87f23e2945db16199ef88d8 280 Gene3D G3DSA:2.40.50.140 211 280 5.0E-8 T 12-10-2018 M634_09955 07cda28bb87f23e2945db16199ef88d8 280 Gene3D G3DSA:3.30.470.30 51 151 3.4E-56 T 12-10-2018 M634_09955 07cda28bb87f23e2945db16199ef88d8 280 Pfam PF14743 DNA ligase OB-like domain 212 277 3.3E-27 T 12-10-2018 IPR029319 DNA ligase, OB-like domain M634_09955 07cda28bb87f23e2945db16199ef88d8 280 Gene3D G3DSA:3.30.1490.70 31 190 3.4E-56 T 12-10-2018 M634_16545 9d0b19ea9dcc9d6c26af7306d659546e 107 PIRSF PIRSF029143 3 107 8.3E-48 T 12-10-2018 IPR008314 Uncharacterised conserved protein UCP029143 M634_16545 9d0b19ea9dcc9d6c26af7306d659546e 107 SUPERFAMILY SSF88697 5 105 1.32E-32 T 12-10-2018 IPR015947 PUA-like superfamily M634_16545 9d0b19ea9dcc9d6c26af7306d659546e 107 Pfam PF04266 ASCH domain 9 105 8.7E-15 T 12-10-2018 IPR007374 ASCH domain M634_16545 9d0b19ea9dcc9d6c26af7306d659546e 107 SMART SM01022 8 106 8.3E-26 T 12-10-2018 IPR007374 ASCH domain M634_16545 9d0b19ea9dcc9d6c26af7306d659546e 107 Hamap MF_00684 UPF0267 protein YqfB [yqfB]. 4 105 29.762 T 12-10-2018 IPR008314 Uncharacterised conserved protein UCP029143 M634_16545 9d0b19ea9dcc9d6c26af7306d659546e 107 Gene3D G3DSA:2.30.130.30 3 105 5.2E-44 T 12-10-2018 M634_14810 400bf75ecd3a947143e9902b6b3b4e4d 331 Pfam PF00005 ABC transporter 35 192 6.0E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_14810 400bf75ecd3a947143e9902b6b3b4e4d 331 Gene3D G3DSA:3.40.50.300 8 331 1.3E-77 T 12-10-2018 M634_14810 400bf75ecd3a947143e9902b6b3b4e4d 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 328 1.1E-22 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 M634_14810 400bf75ecd3a947143e9902b6b3b4e4d 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 308 5.2E-17 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 M634_14810 400bf75ecd3a947143e9902b6b3b4e4d 331 SMART SM00382 43 241 7.1E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_14810 400bf75ecd3a947143e9902b6b3b4e4d 331 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_14810 400bf75ecd3a947143e9902b6b3b4e4d 331 SUPERFAMILY SSF52540 10 262 6.14E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_16820 0d0c3fda01f5e530775ed4f55ae07432 308 SMART SM00257 47 91 6.3E-6 T 12-10-2018 IPR018392 LysM domain M634_16820 0d0c3fda01f5e530775ed4f55ae07432 308 SUPERFAMILY SSF54106 47 91 3.14E-7 T 12-10-2018 M634_16820 0d0c3fda01f5e530775ed4f55ae07432 308 SUPERFAMILY SSF141523 100 238 2.09E-30 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like M634_16820 0d0c3fda01f5e530775ed4f55ae07432 308 Gene3D G3DSA:2.40.440.10 27 306 8.3E-85 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like M634_16820 0d0c3fda01f5e530775ed4f55ae07432 308 Pfam PF03734 L,D-transpeptidase catalytic domain 104 238 6.7E-22 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 M634_16820 0d0c3fda01f5e530775ed4f55ae07432 308 Pfam PF01476 LysM domain 48 91 4.1E-9 T 12-10-2018 IPR018392 LysM domain M634_04500 dbcb7f045a1ced207271d872c1ca262f 273 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 257 1.4E-83 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 M634_04500 dbcb7f045a1ced207271d872c1ca262f 273 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 262 20.086 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 M634_04500 dbcb7f045a1ced207271d872c1ca262f 273 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 5 262 2.7E-90 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 M634_04500 dbcb7f045a1ced207271d872c1ca262f 273 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 M634_05240 898c92bf7a78409d2fca2c451b8970ca 529 Pfam PF01464 Transglycosylase SLT domain 318 421 1.0E-20 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 M634_05240 898c92bf7a78409d2fca2c451b8970ca 529 SMART SM00062 47 288 5.0E-25 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M634_05240 898c92bf7a78409d2fca2c451b8970ca 529 Gene3D G3DSA:3.40.190.10 132 244 1.2E-73 T 12-10-2018 M634_05240 898c92bf7a78409d2fca2c451b8970ca 529 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 12 488 48.66 T 12-10-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 M634_05240 898c92bf7a78409d2fca2c451b8970ca 529 Gene3D G3DSA:3.40.190.10 41 283 1.2E-73 T 12-10-2018 M634_05240 898c92bf7a78409d2fca2c451b8970ca 529 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 329 357 - T 12-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 M634_05240 898c92bf7a78409d2fca2c451b8970ca 529 SUPERFAMILY SSF53850 48 287 5.34E-33 T 12-10-2018 M634_05240 898c92bf7a78409d2fca2c451b8970ca 529 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 48 287 3.3E-29 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M634_05240 898c92bf7a78409d2fca2c451b8970ca 529 SUPERFAMILY SSF53955 265 470 1.29E-35 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily M634_05240 898c92bf7a78409d2fca2c451b8970ca 529 Gene3D G3DSA:1.10.530.10 307 486 5.2E-34 T 12-10-2018 M634_09210 ebefb2e166dcf6034e0f8b281f12220a 323 Gene3D G3DSA:3.40.190.10 123 249 2.9E-58 T 12-10-2018 M634_09210 ebefb2e166dcf6034e0f8b281f12220a 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 65 320 1.8E-26 T 12-10-2018 IPR005064 Bordetella uptake gene GO:0030288 M634_09210 ebefb2e166dcf6034e0f8b281f12220a 323 SUPERFAMILY SSF53850 105 289 5.16E-8 T 12-10-2018 M634_09210 ebefb2e166dcf6034e0f8b281f12220a 323 PIRSF PIRSF017082 2 323 2.7E-83 T 12-10-2018 IPR005064 Bordetella uptake gene GO:0030288 M634_09210 ebefb2e166dcf6034e0f8b281f12220a 323 Gene3D G3DSA:3.40.190.150 31 314 2.9E-58 T 12-10-2018 M634_16945 b667e359cb5fb7027ab3bd09da57c33c 299 Gene3D G3DSA:3.40.190.290 90 292 3.5E-62 T 12-10-2018 M634_16945 b667e359cb5fb7027ab3bd09da57c33c 299 Gene3D G3DSA:1.10.10.10 1 85 6.5E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_16945 b667e359cb5fb7027ab3bd09da57c33c 299 SUPERFAMILY SSF53850 88 292 5.97E-43 T 12-10-2018 M634_16945 b667e359cb5fb7027ab3bd09da57c33c 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 3.7E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_16945 b667e359cb5fb7027ab3bd09da57c33c 299 SUPERFAMILY SSF46785 1 87 1.72E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_16945 b667e359cb5fb7027ab3bd09da57c33c 299 Pfam PF03466 LysR substrate binding domain 88 291 6.4E-43 T 12-10-2018 IPR005119 LysR, substrate-binding M634_12120 e47b6d95661940bf26ee659d24d03f86 698 Gene3D G3DSA:3.30.450.20 72 226 3.1E-22 T 12-10-2018 M634_12120 e47b6d95661940bf26ee659d24d03f86 698 Gene3D G3DSA:3.30.450.20 68 322 3.1E-22 T 12-10-2018 M634_12120 e47b6d95661940bf26ee659d24d03f86 698 Gene3D G3DSA:1.10.287.950 366 698 8.5E-66 T 12-10-2018 M634_12120 e47b6d95661940bf26ee659d24d03f86 698 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 456 485 6.2E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M634_12120 e47b6d95661940bf26ee659d24d03f86 698 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 562 591 6.2E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M634_12120 e47b6d95661940bf26ee659d24d03f86 698 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 533 560 6.2E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M634_12120 e47b6d95661940bf26ee659d24d03f86 698 SMART SM00304 366 420 2.7E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_12120 e47b6d95661940bf26ee659d24d03f86 698 SMART SM00283 435 696 3.7E-60 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_12120 e47b6d95661940bf26ee659d24d03f86 698 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 502 662 4.1E-40 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_12120 e47b6d95661940bf26ee659d24d03f86 698 SUPERFAMILY SSF58104 388 697 1.57E-71 T 12-10-2018 M634_02290 d2b1b7f638a17a78bd73244b5e4f7ad4 450 Pfam PF00069 Protein kinase domain 79 280 2.1E-38 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 M634_02290 d2b1b7f638a17a78bd73244b5e4f7ad4 450 SMART SM00220 79 325 4.0E-28 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 M634_02290 d2b1b7f638a17a78bd73244b5e4f7ad4 450 Gene3D G3DSA:1.10.510.10 164 336 7.4E-27 T 12-10-2018 M634_02290 d2b1b7f638a17a78bd73244b5e4f7ad4 450 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 85 110 - T 12-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 M634_02290 d2b1b7f638a17a78bd73244b5e4f7ad4 450 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 198 210 - T 12-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 M634_02290 d2b1b7f638a17a78bd73244b5e4f7ad4 450 Gene3D G3DSA:3.30.200.20 70 158 5.6E-21 T 12-10-2018 M634_02290 d2b1b7f638a17a78bd73244b5e4f7ad4 450 SUPERFAMILY SSF56112 73 281 7.96E-52 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily M634_06350 94425e2c1e511a664fd8ceef45a77b94 284 Gene3D G3DSA:3.40.50.1820 1 278 1.5E-47 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_06350 94425e2c1e511a664fd8ceef45a77b94 284 Pfam PF00561 alpha/beta hydrolase fold 27 202 2.8E-17 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 M634_06350 94425e2c1e511a664fd8ceef45a77b94 284 SUPERFAMILY SSF53474 2 282 5.76E-44 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_17485 c82842190ddeb622dce32d6be9ada146 354 Pfam PF13265 Protein of unknown function (DUF4056) 19 280 3.3E-110 T 12-10-2018 IPR025130 Protein of unknown function DUF4056 M634_16550 b86fa2e90024e10caced4ab104ffde3b 199 Pfam PF16925 Bacterial transcriptional repressor C-terminal 83 186 4.0E-7 T 12-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal M634_16550 b86fa2e90024e10caced4ab104ffde3b 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.2E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M634_16550 b86fa2e90024e10caced4ab104ffde3b 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.2E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M634_16550 b86fa2e90024e10caced4ab104ffde3b 199 SUPERFAMILY SSF48498 82 193 1.24E-20 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily M634_16550 b86fa2e90024e10caced4ab104ffde3b 199 SUPERFAMILY SSF46689 2 73 7.18E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_16550 b86fa2e90024e10caced4ab104ffde3b 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 2.9E-12 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M634_16550 b86fa2e90024e10caced4ab104ffde3b 199 Gene3D G3DSA:1.10.357.10 1 194 2.7E-59 T 12-10-2018 M634_06515 337e59b6041c5c0244f5fcf929b4e674 246 Gene3D G3DSA:1.10.530.10 85 197 2.9E-7 T 12-10-2018 M634_06515 337e59b6041c5c0244f5fcf929b4e674 246 SUPERFAMILY SSF53955 77 194 1.69E-12 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily M634_08465 af6cad6e2c72cffa4d5cf67f849021b9 365 SUPERFAMILY SSF81345 41 360 1.44E-78 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M634_08465 af6cad6e2c72cffa4d5cf67f849021b9 365 Gene3D G3DSA:1.10.3470.10 39 362 2.3E-93 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M634_08465 af6cad6e2c72cffa4d5cf67f849021b9 365 Pfam PF01032 FecCD transport family 59 360 6.5E-80 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 M634_08465 af6cad6e2c72cffa4d5cf67f849021b9 365 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 37 363 30.912 T 12-10-2018 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 M634_21345 23be232dbec1f507c146f1a03b82ab40 440 Gene3D G3DSA:3.20.20.70 15 411 1.1E-113 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_21345 23be232dbec1f507c146f1a03b82ab40 440 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 252 326 4.0E-6 T 12-10-2018 M634_21345 23be232dbec1f507c146f1a03b82ab40 440 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 18 409 6.7E-150 T 12-10-2018 M634_21345 23be232dbec1f507c146f1a03b82ab40 440 Pfam PF13186 Iron-sulfur cluster-binding domain 303 363 1.5E-8 T 12-10-2018 IPR023885 4Fe4S-binding SPASM domain M634_21345 23be232dbec1f507c146f1a03b82ab40 440 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 302 391 7.0E-19 T 12-10-2018 IPR023885 4Fe4S-binding SPASM domain M634_21345 23be232dbec1f507c146f1a03b82ab40 440 SUPERFAMILY SSF102114 24 372 2.49E-37 T 12-10-2018 M634_21345 23be232dbec1f507c146f1a03b82ab40 440 Pfam PF04055 Radical SAM superfamily 24 196 2.1E-13 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 M634_13280 a5bf9a3709ab779fb667e4cdaa80ef32 232 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 222 1.8E-59 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 M634_13280 a5bf9a3709ab779fb667e4cdaa80ef32 232 PRINTS PR00783 Major intrinsic protein family signature 2 21 3.8E-51 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 M634_13280 a5bf9a3709ab779fb667e4cdaa80ef32 232 PRINTS PR00783 Major intrinsic protein family signature 42 66 3.8E-51 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 M634_13280 a5bf9a3709ab779fb667e4cdaa80ef32 232 PRINTS PR00783 Major intrinsic protein family signature 136 154 3.8E-51 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 M634_13280 a5bf9a3709ab779fb667e4cdaa80ef32 232 PRINTS PR00783 Major intrinsic protein family signature 79 98 3.8E-51 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 M634_13280 a5bf9a3709ab779fb667e4cdaa80ef32 232 PRINTS PR00783 Major intrinsic protein family signature 166 188 3.8E-51 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 M634_13280 a5bf9a3709ab779fb667e4cdaa80ef32 232 PRINTS PR00783 Major intrinsic protein family signature 205 225 3.8E-51 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 M634_13280 a5bf9a3709ab779fb667e4cdaa80ef32 232 ProSitePatterns PS00221 MIP family signature. 60 68 - T 12-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 M634_13280 a5bf9a3709ab779fb667e4cdaa80ef32 232 SUPERFAMILY SSF81338 2 227 3.79E-68 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 M634_13280 a5bf9a3709ab779fb667e4cdaa80ef32 232 Hamap MF_01146 Aquaporin Z [aqpZ]. 1 229 35.001 T 12-10-2018 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 M634_13280 a5bf9a3709ab779fb667e4cdaa80ef32 232 Pfam PF00230 Major intrinsic protein 2 222 2.2E-48 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 M634_13280 a5bf9a3709ab779fb667e4cdaa80ef32 232 Gene3D G3DSA:1.20.1080.10 1 229 5.5E-85 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 M634_01995 5c8b5aafd0bd91668a16836cff4e5342 318 SUPERFAMILY SSF56935 71 318 2.44E-5 T 12-10-2018 M634_01995 5c8b5aafd0bd91668a16836cff4e5342 318 PIRSF PIRSF028696 1 318 2.7E-128 T 12-10-2018 IPR016896 Protein of unknown function DUF2860 M634_01995 5c8b5aafd0bd91668a16836cff4e5342 318 Pfam PF11059 Protein of unknown function (DUF2860) 26 317 2.4E-113 T 12-10-2018 IPR016896 Protein of unknown function DUF2860 M634_07050 ec8ff08fabcdcb7d75313b6d4876ff47 232 Gene3D G3DSA:3.30.70.1560 121 220 9.6E-41 T 12-10-2018 M634_07050 ec8ff08fabcdcb7d75313b6d4876ff47 232 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 92 106 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 M634_07050 ec8ff08fabcdcb7d75313b6d4876ff47 232 Pfam PF00849 RNA pseudouridylate synthase 57 201 6.1E-17 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 M634_07050 ec8ff08fabcdcb7d75313b6d4876ff47 232 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 61 231 1.4E-58 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 M634_07050 ec8ff08fabcdcb7d75313b6d4876ff47 232 Gene3D G3DSA:3.30.70.580 45 120 1.2E-26 T 12-10-2018 M634_07050 ec8ff08fabcdcb7d75313b6d4876ff47 232 SUPERFAMILY SSF55120 47 230 6.88E-45 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 M634_15930 2bb457c6db6d7d5a8275dea2b00593dd 250 Gene3D G3DSA:3.30.2350.10 4 221 8.0E-70 T 12-10-2018 M634_15930 2bb457c6db6d7d5a8275dea2b00593dd 250 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 8 211 6.9E-58 T 12-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 M634_15930 2bb457c6db6d7d5a8275dea2b00593dd 250 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 60 74 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 M634_15930 2bb457c6db6d7d5a8275dea2b00593dd 250 SUPERFAMILY SSF55120 7 221 1.54E-62 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 M634_15930 2bb457c6db6d7d5a8275dea2b00593dd 250 Pfam PF00849 RNA pseudouridylate synthase 22 174 1.9E-29 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 M634_24445 28355156c3d8c2fbf1e8221ba309dc90 282 Pfam PF05853 beta-keto acid cleavage enzyme 4 262 3.9E-84 T 12-10-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247 M634_24445 28355156c3d8c2fbf1e8221ba309dc90 282 Gene3D G3DSA:3.20.20.70 1 268 4.8E-90 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_04480 fc8c5d5780724996ab8727b75f987f00 226 SUPERFAMILY SSF52980 2 220 1.98E-80 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 M634_04480 fc8c5d5780724996ab8727b75f987f00 226 Pfam PF02976 DNA mismatch repair enzyme MutH 53 151 1.6E-34 T 12-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 M634_04480 fc8c5d5780724996ab8727b75f987f00 226 SMART SM00927 53 151 4.2E-65 T 12-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 M634_04480 fc8c5d5780724996ab8727b75f987f00 226 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 226 145.678 T 12-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 M634_04480 fc8c5d5780724996ab8727b75f987f00 226 Gene3D G3DSA:3.40.600.10 1 222 5.3E-55 T 12-10-2018 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily GO:0003677|GO:0004519 M634_04480 fc8c5d5780724996ab8727b75f987f00 226 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 5 219 2.4E-100 T 12-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 M634_03560 b290438015f4f12aae85b9e8d1a833ef 212 SUPERFAMILY SSF52507 11 207 5.63E-57 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 M634_03560 b290438015f4f12aae85b9e8d1a833ef 212 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 11 208 34.819 T 12-10-2018 IPR004507 Flavin prenyltransferase UbiX-like M634_03560 b290438015f4f12aae85b9e8d1a833ef 212 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 13 206 3.4E-57 T 12-10-2018 IPR004507 Flavin prenyltransferase UbiX-like M634_03560 b290438015f4f12aae85b9e8d1a833ef 212 Pfam PF02441 Flavoprotein 12 187 1.9E-25 T 12-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 M634_03560 b290438015f4f12aae85b9e8d1a833ef 212 Gene3D G3DSA:3.40.50.1950 3 209 6.7E-78 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 M634_13735 2e76fe79c777efd6005bd9d2a7a63553 116 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 112 2.6E-31 T 12-10-2018 IPR006504 Transcriptional regulator Spx/MgsR M634_13735 2e76fe79c777efd6005bd9d2a7a63553 116 Pfam PF03960 ArsC family 6 112 5.2E-19 T 12-10-2018 IPR006660 Arsenate reductase-like M634_13735 2e76fe79c777efd6005bd9d2a7a63553 116 Gene3D G3DSA:3.40.30.10 2 114 2.5E-42 T 12-10-2018 M634_13735 2e76fe79c777efd6005bd9d2a7a63553 116 SUPERFAMILY SSF52833 2 114 1.27E-35 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M634_19300 29e119e1904045ee477ac0144949674c 447 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 16 447 4.7E-104 T 12-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) M634_19300 29e119e1904045ee477ac0144949674c 447 SUPERFAMILY SSF56935 24 447 2.29E-88 T 12-10-2018 M634_20135 a7ff54de43443543a69fbe3fbc6d2204 309 Pfam PF01297 Zinc-uptake complex component A periplasmic 50 301 1.0E-21 T 12-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 M634_20135 a7ff54de43443543a69fbe3fbc6d2204 309 Gene3D G3DSA:3.40.50.1980 46 193 2.9E-18 T 12-10-2018 M634_20135 a7ff54de43443543a69fbe3fbc6d2204 309 SUPERFAMILY SSF53807 29 296 7.36E-50 T 12-10-2018 M634_20135 a7ff54de43443543a69fbe3fbc6d2204 309 Gene3D G3DSA:3.40.50.1980 196 305 4.3E-5 T 12-10-2018 M634_12370 9bde0cbe95b5d394e1a63286f38bc494 467 SUPERFAMILY SSF56672 11 225 1.51E-33 T 12-10-2018 M634_12370 9bde0cbe95b5d394e1a63286f38bc494 467 Gene3D G3DSA:1.10.150.20 167 207 4.5E-9 T 12-10-2018 M634_12370 9bde0cbe95b5d394e1a63286f38bc494 467 Pfam PF00817 impB/mucB/samB family 23 146 8.1E-9 T 12-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 M634_12370 9bde0cbe95b5d394e1a63286f38bc494 467 Gene3D G3DSA:3.30.70.270 69 166 4.5E-9 T 12-10-2018 M634_12370 9bde0cbe95b5d394e1a63286f38bc494 467 Gene3D G3DSA:2.30.40.20 24 68 4.5E-9 T 12-10-2018 M634_06395 a126cb83962c41f5bc876fbe0494389d 399 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 189 396 4.1E-71 T 12-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 M634_06395 a126cb83962c41f5bc876fbe0494389d 399 Pfam PF07670 Nucleoside recognition 87 182 2.0E-6 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 M634_06395 a126cb83962c41f5bc876fbe0494389d 399 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 1 395 6.4E-134 T 12-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 M634_06395 a126cb83962c41f5bc876fbe0494389d 399 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 5 78 2.4E-26 T 12-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 M634_12960 e74e81335e1255cbe1d60f65e40032e1 273 Pfam PF11207 Protein of unknown function (DUF2989) 16 218 1.1E-76 T 12-10-2018 IPR021372 Protein of unknown function DUF2989 M634_08145 8ab780d64566a1e5c2d851cb4f7f6ca6 573 Pfam PF00005 ABC transporter 356 502 1.3E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_08145 8ab780d64566a1e5c2d851cb4f7f6ca6 573 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 6 533 1.0E-132 T 12-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 M634_08145 8ab780d64566a1e5c2d851cb4f7f6ca6 573 Gene3D G3DSA:1.20.1560.10 1 321 3.7E-27 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M634_08145 8ab780d64566a1e5c2d851cb4f7f6ca6 573 SUPERFAMILY SSF90123 7 323 1.31E-39 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M634_08145 8ab780d64566a1e5c2d851cb4f7f6ca6 573 Gene3D G3DSA:3.40.50.300 326 573 3.2E-76 T 12-10-2018 M634_08145 8ab780d64566a1e5c2d851cb4f7f6ca6 573 SUPERFAMILY SSF52540 335 571 2.52E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_08145 8ab780d64566a1e5c2d851cb4f7f6ca6 573 SMART SM00382 365 549 4.5E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_08145 8ab780d64566a1e5c2d851cb4f7f6ca6 573 Pfam PF00664 ABC transporter transmembrane region 26 272 2.8E-11 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 M634_08145 8ab780d64566a1e5c2d851cb4f7f6ca6 573 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_00310 163b5565b48decf16ad5bf5e0c3457d2 106 Hamap MF_00744 Met repressor [metJ]. 1 105 34.758 T 12-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 M634_00310 163b5565b48decf16ad5bf5e0c3457d2 106 Gene3D G3DSA:1.10.140.10 2 105 4.7E-56 T 12-10-2018 IPR023453 Methionine repressor MetJ domain superfamily M634_00310 163b5565b48decf16ad5bf5e0c3457d2 106 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 4.0E-49 T 12-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 M634_00310 163b5565b48decf16ad5bf5e0c3457d2 106 Pfam PF01340 Met Apo-repressor, MetJ 3 99 3.6E-59 T 12-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 M634_00310 163b5565b48decf16ad5bf5e0c3457d2 106 SUPERFAMILY SSF47598 3 104 8.67E-57 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 M634_03395 a7cce014599a851da5a362b0f6ba5fe0 129 SUPERFAMILY SSF53137 14 129 6.54E-48 T 12-10-2018 M634_03395 a7cce014599a851da5a362b0f6ba5fe0 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 32.665 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 M634_03395 a7cce014599a851da5a362b0f6ba5fe0 129 Pfam PF00411 Ribosomal protein S11 19 128 1.5E-52 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 M634_03395 a7cce014599a851da5a362b0f6ba5fe0 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 4.2E-55 T 12-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_03395 a7cce014599a851da5a362b0f6ba5fe0 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 12-10-2018 IPR018102 Ribosomal S11, conserved site M634_03395 a7cce014599a851da5a362b0f6ba5fe0 129 Gene3D G3DSA:3.30.420.80 1 129 3.3E-57 T 12-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 M634_03395 a7cce014599a851da5a362b0f6ba5fe0 129 PIRSF PIRSF002131 1 129 2.1E-52 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 M634_23255 ec173ff4319b64317cf5d6d4b45d9423 309 SUPERFAMILY SSF55136 166 300 5.06E-18 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily M634_23255 ec173ff4319b64317cf5d6d4b45d9423 309 Gene3D G3DSA:3.30.530.20 3 152 5.1E-18 T 12-10-2018 IPR023393 START-like domain superfamily M634_23255 ec173ff4319b64317cf5d6d4b45d9423 309 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 5 147 6.2E-24 T 12-10-2018 IPR019587 Polyketide cyclase/dehydrase M634_23255 ec173ff4319b64317cf5d6d4b45d9423 309 Pfam PF06445 GyrI-like small molecule binding domain 166 306 1.1E-10 T 12-10-2018 IPR029442 GyrI-like small molecule binding domain M634_23255 ec173ff4319b64317cf5d6d4b45d9423 309 SMART SM00871 156 309 1.0E-5 T 12-10-2018 IPR010499 Bacterial transcription activator, effector binding M634_23255 ec173ff4319b64317cf5d6d4b45d9423 309 Gene3D G3DSA:3.20.80.10 155 307 2.9E-23 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily M634_23255 ec173ff4319b64317cf5d6d4b45d9423 309 SUPERFAMILY SSF55961 5 146 3.73E-17 T 12-10-2018 M634_08625 4aefcc4d96eae17b96f4c63dbd096a2c 306 Gene3D G3DSA:1.10.3720.10 84 301 3.0E-19 T 12-10-2018 IPR035906 MetI-like superfamily M634_08625 4aefcc4d96eae17b96f4c63dbd096a2c 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 305 1.1E-37 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_08625 4aefcc4d96eae17b96f4c63dbd096a2c 306 SUPERFAMILY SSF161098 91 290 2.62E-17 T 12-10-2018 IPR035906 MetI-like superfamily M634_23035 78a83341dab54b8481c077d438400b68 377 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 268 353 4.4E-11 T 12-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain M634_23035 78a83341dab54b8481c077d438400b68 377 Gene3D G3DSA:3.60.21.10 1 265 5.6E-80 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like M634_23035 78a83341dab54b8481c077d438400b68 377 Pfam PF00149 Calcineurin-like phosphoesterase 1 218 1.3E-18 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 M634_23035 78a83341dab54b8481c077d438400b68 377 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 245 4.3E-58 T 12-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 M634_23035 78a83341dab54b8481c077d438400b68 377 SUPERFAMILY SSF56300 1 320 8.36E-62 T 12-10-2018 M634_24195 31d14cf3a24f36c011c860d59045ade1 523 Gene3D G3DSA:3.40.50.300 2 266 2.6E-40 T 12-10-2018 M634_24195 31d14cf3a24f36c011c860d59045ade1 523 Pfam PF00005 ABC transporter 29 170 1.8E-15 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_24195 31d14cf3a24f36c011c860d59045ade1 523 SUPERFAMILY SSF52540 354 512 1.2E-28 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_24195 31d14cf3a24f36c011c860d59045ade1 523 SMART SM00382 28 215 1.7E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_24195 31d14cf3a24f36c011c860d59045ade1 523 SMART SM00382 360 521 4.8E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_24195 31d14cf3a24f36c011c860d59045ade1 523 Pfam PF00005 ABC transporter 354 480 1.3E-14 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_24195 31d14cf3a24f36c011c860d59045ade1 523 SUPERFAMILY SSF52540 3 237 2.41E-32 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_24195 31d14cf3a24f36c011c860d59045ade1 523 Gene3D G3DSA:3.40.50.300 292 521 8.4E-33 T 12-10-2018 M634_00185 96fbaac49a6f12cfce14dabc2556a1f4 223 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 M634_00185 96fbaac49a6f12cfce14dabc2556a1f4 223 SUPERFAMILY SSF51366 4 217 2.67E-78 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 M634_00185 96fbaac49a6f12cfce14dabc2556a1f4 223 PIRSF PIRSF001461 1 223 6.7E-107 T 12-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 M634_00185 96fbaac49a6f12cfce14dabc2556a1f4 223 Gene3D G3DSA:3.20.20.70 5 222 4.1E-87 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_00185 96fbaac49a6f12cfce14dabc2556a1f4 223 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 M634_00185 96fbaac49a6f12cfce14dabc2556a1f4 223 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 1.7E-92 T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 M634_00185 96fbaac49a6f12cfce14dabc2556a1f4 223 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 2.1E-100 T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 M634_21855 6ce181032c5fe893998a22964bceefdb 83 Pfam PF11212 Protein of unknown function (DUF2999) 1 82 6.0E-44 T 12-10-2018 IPR021376 Protein of unknown function DUF2999 M634_04725 8d01902f9e5ab8ede2e16166ee851dbe 279 PIRSF PIRSF018455 2 279 5.7E-117 T 12-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 M634_04725 8d01902f9e5ab8ede2e16166ee851dbe 279 Pfam PF03411 Penicillin-insensitive murein endopeptidase 36 276 5.2E-95 T 12-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 M634_04725 8d01902f9e5ab8ede2e16166ee851dbe 279 SUPERFAMILY SSF55166 21 276 3.06E-97 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 M634_04725 8d01902f9e5ab8ede2e16166ee851dbe 279 Gene3D G3DSA:3.30.1380.10 20 279 3.8E-98 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 M634_03580 203a297866f120b24689c80a6161208b 145 Gene3D G3DSA:3.40.50.620 1 142 2.8E-36 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M634_03580 203a297866f120b24689c80a6161208b 145 PIRSF PIRSF006276 1 145 1.9E-18 T 12-10-2018 IPR006015 Universal stress protein A M634_03580 203a297866f120b24689c80a6161208b 145 SUPERFAMILY SSF52402 2 143 1.93E-34 T 12-10-2018 M634_03580 203a297866f120b24689c80a6161208b 145 PRINTS PR01438 Universal stress protein signature 102 114 2.3E-11 T 12-10-2018 IPR006015 Universal stress protein A M634_03580 203a297866f120b24689c80a6161208b 145 PRINTS PR01438 Universal stress protein signature 2 20 2.3E-11 T 12-10-2018 IPR006015 Universal stress protein A M634_03580 203a297866f120b24689c80a6161208b 145 PRINTS PR01438 Universal stress protein signature 120 142 2.3E-11 T 12-10-2018 IPR006015 Universal stress protein A M634_03580 203a297866f120b24689c80a6161208b 145 Pfam PF00582 Universal stress protein family 1 142 2.5E-32 T 12-10-2018 IPR006016 UspA M634_20025 e69bf1e9963e0f9a36f8d94234a2bc0f 204 PIRSF PIRSF006324 1 204 7.0E-50 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 M634_20025 e69bf1e9963e0f9a36f8d94234a2bc0f 204 Pfam PF01810 LysE type translocator 15 202 5.9E-26 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 M634_13470 9fe431183de97427fed95caecf16a72a 258 Pfam PF04333 MlaA lipoprotein 41 233 1.2E-62 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 M634_13470 9fe431183de97427fed95caecf16a72a 258 PRINTS PR01805 VacJ lipoprotein signature 112 129 4.4E-29 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 M634_13470 9fe431183de97427fed95caecf16a72a 258 PRINTS PR01805 VacJ lipoprotein signature 149 166 4.4E-29 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 M634_13470 9fe431183de97427fed95caecf16a72a 258 PRINTS PR01805 VacJ lipoprotein signature 61 77 4.4E-29 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 M634_13470 9fe431183de97427fed95caecf16a72a 258 PRINTS PR01805 VacJ lipoprotein signature 43 56 4.4E-29 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 M634_07990 3af979ec84154faf508871d912d29224 400 SUPERFAMILY SSF103473 8 398 1.2E-63 T 12-10-2018 IPR036259 MFS transporter superfamily M634_07990 3af979ec84154faf508871d912d29224 400 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 13 395 2.7E-120 T 12-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 M634_07990 3af979ec84154faf508871d912d29224 400 Pfam PF07690 Major Facilitator Superfamily 24 364 1.1E-49 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M634_07990 3af979ec84154faf508871d912d29224 400 Gene3D G3DSA:1.20.1720.10 17 396 2.8E-100 T 12-10-2018 M634_13345 416a49d3cbb0d29977e4e7dd90b86a2d 308 Gene3D G3DSA:3.90.226.10 25 285 7.7E-82 T 12-10-2018 M634_13345 416a49d3cbb0d29977e4e7dd90b86a2d 308 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 284 2.4E-140 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M634_13345 416a49d3cbb0d29977e4e7dd90b86a2d 308 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 37.517 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M634_13345 416a49d3cbb0d29977e4e7dd90b86a2d 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 7.1E-39 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M634_13345 416a49d3cbb0d29977e4e7dd90b86a2d 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 7.1E-39 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M634_13345 416a49d3cbb0d29977e4e7dd90b86a2d 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 7.1E-39 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M634_13345 416a49d3cbb0d29977e4e7dd90b86a2d 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 7.1E-39 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M634_13345 416a49d3cbb0d29977e4e7dd90b86a2d 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 7.1E-39 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M634_13345 416a49d3cbb0d29977e4e7dd90b86a2d 308 SUPERFAMILY SSF52096 25 282 2.27E-84 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily M634_13345 416a49d3cbb0d29977e4e7dd90b86a2d 308 Pfam PF01039 Carboxyl transferase domain 100 240 5.4E-14 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 M634_19250 7ad7be3dfe03624696fdce460ff6c9a8 1372 Pfam PF10462 Peptidase M66 584 623 7.8E-6 T 12-10-2018 IPR019503 Peptidase M66 domain GO:0004222 M634_19250 7ad7be3dfe03624696fdce460ff6c9a8 1372 SUPERFAMILY SSF55486 490 660 4.27E-9 T 12-10-2018 M634_19250 7ad7be3dfe03624696fdce460ff6c9a8 1372 SUPERFAMILY SSF55486 300 665 1.1E-17 T 12-10-2018 M634_19250 7ad7be3dfe03624696fdce460ff6c9a8 1372 Gene3D G3DSA:3.40.390.10 565 661 2.8E-8 T 12-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 M634_02080 cd579f96f2b48d1f37961618da16d2d6 370 Gene3D G3DSA:3.40.50.450 2 294 6.7E-98 T 12-10-2018 M634_02080 cd579f96f2b48d1f37961618da16d2d6 370 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 76 289 8.6E-79 T 12-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 M634_02080 cd579f96f2b48d1f37961618da16d2d6 370 SUPERFAMILY SSF102405 84 291 2.29E-43 T 12-10-2018 M634_02080 cd579f96f2b48d1f37961618da16d2d6 370 Pfam PF02481 DNA recombination-mediator protein A 77 281 1.1E-77 T 12-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 M634_02080 cd579f96f2b48d1f37961618da16d2d6 370 Gene3D G3DSA:1.10.10.10 307 365 7.2E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_12560 84777fc8a9d415e5873126689f11bfe9 528 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 516 0.0 T 12-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 M634_12560 84777fc8a9d415e5873126689f11bfe9 528 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 528 375.796 T 12-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 M634_12560 84777fc8a9d415e5873126689f11bfe9 528 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 514 0.0 T 12-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 M634_18010 82908f1317a879a7bee4c8319b75902b 333 Pfam PF02274 Amidinotransferase 31 326 3.7E-63 T 12-10-2018 M634_18010 82908f1317a879a7bee4c8319b75902b 333 PIRSF PIRSF028188 7 329 9.9E-160 T 12-10-2018 IPR014541 Predicted amidinotransferase, FN0238 type M634_18010 82908f1317a879a7bee4c8319b75902b 333 SUPERFAMILY SSF55909 27 321 3.64E-37 T 12-10-2018 M634_18010 82908f1317a879a7bee4c8319b75902b 333 Gene3D G3DSA:3.75.10.10 26 321 7.2E-44 T 12-10-2018 M634_02555 354aaa76e5b5985f45aac0509744cdb1 212 Gene3D G3DSA:3.40.50.150 2 109 4.3E-5 T 12-10-2018 M634_02555 354aaa76e5b5985f45aac0509744cdb1 212 Gene3D G3DSA:3.40.50.150 110 206 2.2E-7 T 12-10-2018 M634_02555 354aaa76e5b5985f45aac0509744cdb1 212 Pfam PF13489 Methyltransferase domain 63 192 8.5E-18 T 12-10-2018 M634_02555 354aaa76e5b5985f45aac0509744cdb1 212 SUPERFAMILY SSF53335 47 199 1.34E-19 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_18400 49f5e23943befae9949b393c13d26253 202 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 11 186 1.3E-31 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT M634_04365 5a332b5be860575171aef24ea3f2cf00 318 Pfam PF08544 GHMP kinases C terminal 218 291 3.4E-9 T 12-10-2018 IPR013750 GHMP kinase, C-terminal domain M634_04365 5a332b5be860575171aef24ea3f2cf00 318 Hamap MF_00384 Homoserine kinase [thrB]. 5 314 29.128 T 12-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 M634_04365 5a332b5be860575171aef24ea3f2cf00 318 SUPERFAMILY SSF55060 178 294 5.76E-33 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily M634_04365 5a332b5be860575171aef24ea3f2cf00 318 PIRSF PIRSF000676 1 316 4.1E-80 T 12-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 M634_04365 5a332b5be860575171aef24ea3f2cf00 318 SUPERFAMILY SSF54211 4 191 1.82E-34 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M634_04365 5a332b5be860575171aef24ea3f2cf00 318 PRINTS PR00958 Homoserine kinase signature 143 156 9.5E-31 T 12-10-2018 M634_04365 5a332b5be860575171aef24ea3f2cf00 318 PRINTS PR00958 Homoserine kinase signature 181 198 9.5E-31 T 12-10-2018 M634_04365 5a332b5be860575171aef24ea3f2cf00 318 PRINTS PR00958 Homoserine kinase signature 10 25 9.5E-31 T 12-10-2018 M634_04365 5a332b5be860575171aef24ea3f2cf00 318 PRINTS PR00958 Homoserine kinase signature 260 275 9.5E-31 T 12-10-2018 M634_04365 5a332b5be860575171aef24ea3f2cf00 318 PRINTS PR00958 Homoserine kinase signature 103 118 9.5E-31 T 12-10-2018 M634_04365 5a332b5be860575171aef24ea3f2cf00 318 TIGRFAM TIGR00191 thrB: homoserine kinase 3 314 3.4E-109 T 12-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 M634_04365 5a332b5be860575171aef24ea3f2cf00 318 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 96 107 - T 12-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 M634_04365 5a332b5be860575171aef24ea3f2cf00 318 Gene3D G3DSA:3.30.230.10 5 173 3.6E-89 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M634_04365 5a332b5be860575171aef24ea3f2cf00 318 Pfam PF00288 GHMP kinases N terminal domain 90 156 4.5E-13 T 12-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 M634_04365 5a332b5be860575171aef24ea3f2cf00 318 Gene3D G3DSA:3.30.70.890 174 283 3.6E-89 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily M634_07695 7a0d3ab09183ed77cea07d26122effb0 78 TIGRFAM TIGR02647 DNA: TIGR02647 family protein 1 77 1.2E-42 T 12-10-2018 IPR013468 Conserved hypothetical protein CHP02647 M634_07695 7a0d3ab09183ed77cea07d26122effb0 78 Pfam PF06146 Phosphate-starvation-inducible E 8 68 9.6E-11 T 12-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like M634_05540 593667576f418e22671b170a13b3464e 180 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 7 164 23.966 T 12-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 M634_05540 593667576f418e22671b170a13b3464e 180 Gene3D G3DSA:3.30.160.150 19 168 2.4E-50 T 12-10-2018 M634_05540 593667576f418e22671b170a13b3464e 180 Pfam PF04390 Lipopolysaccharide-assembly 41 159 4.5E-13 T 12-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 M634_17555 b07699f692a384d6ae18fc049deb0a17 726 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 127 717 2.1E-191 T 12-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 M634_17555 b07699f692a384d6ae18fc049deb0a17 726 Pfam PF02446 4-alpha-glucanotransferase 177 699 1.3E-126 T 12-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 M634_17555 b07699f692a384d6ae18fc049deb0a17 726 SUPERFAMILY SSF51445 163 717 1.03E-148 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M634_18810 948e1c0acff77fc6cc35966094c19fc4 118 Gene3D G3DSA:3.30.1370.150 59 118 3.2E-30 T 12-10-2018 M634_18810 948e1c0acff77fc6cc35966094c19fc4 118 Pfam PF10928 Protein of unknown function (DUF2810) 65 116 6.3E-31 T 12-10-2018 IPR021230 Protein of unknown function DUF2810 M634_07160 3f50b12f4875a4c99f58fd60a3264586 261 Pfam PF02698 DUF218 domain 80 242 2.9E-28 T 12-10-2018 IPR003848 Domain of unknown function DUF218 M634_06180 0c3e8f97e385a59033d9d915db1c1bb0 167 SUPERFAMILY SSF54637 10 156 2.46E-23 T 12-10-2018 IPR029069 HotDog domain superfamily M634_06180 0c3e8f97e385a59033d9d915db1c1bb0 167 Gene3D G3DSA:3.10.129.10 17 157 2.6E-27 T 12-10-2018 M634_06180 0c3e8f97e385a59033d9d915db1c1bb0 167 Pfam PF14539 Domain of unknown function (DUF4442) 15 151 1.6E-24 T 12-10-2018 IPR027961 Protein of unknown function DUF4442 M634_05920 df04199403dbdfbbb881bbc765bcf552 363 Hamap MF_00416 Flagellar P-ring protein [flgI]. 2 363 40.016 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M634_05920 df04199403dbdfbbb881bbc765bcf552 363 Pfam PF02119 Flagellar P-ring protein 22 362 6.4E-139 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M634_05920 df04199403dbdfbbb881bbc765bcf552 363 PRINTS PR01010 Flagellar P-ring protein signature 186 204 9.7E-86 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M634_05920 df04199403dbdfbbb881bbc765bcf552 363 PRINTS PR01010 Flagellar P-ring protein signature 54 69 9.7E-86 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M634_05920 df04199403dbdfbbb881bbc765bcf552 363 PRINTS PR01010 Flagellar P-ring protein signature 102 119 9.7E-86 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M634_05920 df04199403dbdfbbb881bbc765bcf552 363 PRINTS PR01010 Flagellar P-ring protein signature 22 37 9.7E-86 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M634_05920 df04199403dbdfbbb881bbc765bcf552 363 PRINTS PR01010 Flagellar P-ring protein signature 37 52 9.7E-86 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M634_05920 df04199403dbdfbbb881bbc765bcf552 363 PRINTS PR01010 Flagellar P-ring protein signature 80 99 9.7E-86 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M634_05920 df04199403dbdfbbb881bbc765bcf552 363 PRINTS PR01010 Flagellar P-ring protein signature 160 178 9.7E-86 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M634_05920 df04199403dbdfbbb881bbc765bcf552 363 PRINTS PR01010 Flagellar P-ring protein signature 119 137 9.7E-86 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M634_05920 df04199403dbdfbbb881bbc765bcf552 363 PRINTS PR01010 Flagellar P-ring protein signature 250 262 9.7E-86 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M634_05880 ee34f11cdd92e348a294d92b9d3ca5dc 131 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 129 7.5E-28 T 12-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 M634_05880 ee34f11cdd92e348a294d92b9d3ca5dc 131 PIRSF PIRSF002889 1 131 7.5E-32 T 12-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 M634_24605 0ab62fff56253fce8f4a098529a74fdf 282 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 230 245 7.9E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M634_24605 0ab62fff56253fce8f4a098529a74fdf 282 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 261 7.9E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M634_24605 0ab62fff56253fce8f4a098529a74fdf 282 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 215 257 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 M634_24605 0ab62fff56253fce8f4a098529a74fdf 282 SUPERFAMILY SSF46689 214 264 7.62E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_24605 0ab62fff56253fce8f4a098529a74fdf 282 Gene3D G3DSA:1.10.10.60 161 272 1.6E-24 T 12-10-2018 M634_24605 0ab62fff56253fce8f4a098529a74fdf 282 Pfam PF12833 Helix-turn-helix domain 185 261 1.6E-13 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_24605 0ab62fff56253fce8f4a098529a74fdf 282 SMART SM00342 179 261 8.4E-29 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_02920 1df86af73acb41cceb67cce44459cfad 316 PIRSF PIRSF026649 6 312 7.8E-79 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 M634_02920 1df86af73acb41cceb67cce44459cfad 316 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 9 303 3.2E-72 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 M634_02920 1df86af73acb41cceb67cce44459cfad 316 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 9 310 2.2E-134 T 12-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 M634_02920 1df86af73acb41cceb67cce44459cfad 316 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 8 313 43.947 T 12-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 M634_15845 c5b82f9d6e5fbd92b77d387134ee0b2b 162 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 4 152 1.2E-54 T 12-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 M634_15845 c5b82f9d6e5fbd92b77d387134ee0b2b 162 Pfam PF02470 MlaD protein 39 118 8.1E-20 T 12-10-2018 IPR003399 Mce/MlaD M634_19815 c986e7f76c4d5a6f89cb12501f930062 145 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 2 140 3.3E-66 T 12-10-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 M634_19815 c986e7f76c4d5a6f89cb12501f930062 145 SUPERFAMILY SSF46955 4 124 1.03E-27 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily M634_19815 c986e7f76c4d5a6f89cb12501f930062 145 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 28 - T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M634_19815 c986e7f76c4d5a6f89cb12501f930062 145 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 1.3E-12 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M634_19815 c986e7f76c4d5a6f89cb12501f930062 145 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 1.3E-12 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M634_19815 c986e7f76c4d5a6f89cb12501f930062 145 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 1.3E-12 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M634_19815 c986e7f76c4d5a6f89cb12501f930062 145 SMART SM00422 3 71 2.9E-24 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M634_19815 c986e7f76c4d5a6f89cb12501f930062 145 Pfam PF00376 MerR family regulatory protein 4 40 5.7E-13 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M634_19815 c986e7f76c4d5a6f89cb12501f930062 145 Pfam PF09278 MerR, DNA binding 45 109 4.0E-17 T 12-10-2018 IPR015358 Transcription regulator MerR, DNA binding M634_19815 c986e7f76c4d5a6f89cb12501f930062 145 Gene3D G3DSA:1.10.1660.10 1 126 5.8E-33 T 12-10-2018 M634_00650 760b41b25c0f25186a7bb57e22fc83c9 626 SUPERFAMILY SSF58104 317 626 3.01E-73 T 12-10-2018 M634_00650 760b41b25c0f25186a7bb57e22fc83c9 626 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 436 590 2.5E-40 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_00650 760b41b25c0f25186a7bb57e22fc83c9 626 SUPERFAMILY SSF103190 64 175 6.28E-11 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily M634_00650 760b41b25c0f25186a7bb57e22fc83c9 626 SMART SM00304 295 349 9.6E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_00650 760b41b25c0f25186a7bb57e22fc83c9 626 Gene3D G3DSA:3.30.450.20 64 167 4.5E-54 T 12-10-2018 M634_00650 760b41b25c0f25186a7bb57e22fc83c9 626 SMART SM00283 364 625 5.9E-67 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_00650 760b41b25c0f25186a7bb57e22fc83c9 626 Pfam PF02743 Cache domain 38 258 6.6E-26 T 12-10-2018 IPR033479 Double Cache domain 1 M634_00650 760b41b25c0f25186a7bb57e22fc83c9 626 Gene3D G3DSA:1.10.287.950 294 626 9.1E-70 T 12-10-2018 M634_00650 760b41b25c0f25186a7bb57e22fc83c9 626 Pfam PF00672 HAMP domain 296 344 6.2E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_00650 760b41b25c0f25186a7bb57e22fc83c9 626 Gene3D G3DSA:3.30.450.20 51 269 4.5E-54 T 12-10-2018 M634_12020 82399ea15d406cc00156804a4297b89a 481 Pfam PF00218 Indole-3-glycerol phosphate synthase 29 278 4.2E-98 T 12-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 M634_12020 82399ea15d406cc00156804a4297b89a 481 Gene3D G3DSA:3.20.20.70 32 282 1.2E-177 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_12020 82399ea15d406cc00156804a4297b89a 481 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 284 475 3.0E-61 T 12-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 M634_12020 82399ea15d406cc00156804a4297b89a 481 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 27 281 35.758 T 12-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 M634_12020 82399ea15d406cc00156804a4297b89a 481 SUPERFAMILY SSF51366 25 278 3.53E-82 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 M634_12020 82399ea15d406cc00156804a4297b89a 481 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 74 92 - T 12-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 M634_12020 82399ea15d406cc00156804a4297b89a 481 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 282 481 30.352 T 12-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 M634_12020 82399ea15d406cc00156804a4297b89a 481 Gene3D G3DSA:3.20.20.70 283 475 1.2E-177 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_12020 82399ea15d406cc00156804a4297b89a 481 SUPERFAMILY SSF51366 284 479 3.77E-55 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 M634_04185 5f9d5da0c9dec88daac64b7546659e84 437 SUPERFAMILY SSF53244 299 435 3.3E-42 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 M634_04185 5f9d5da0c9dec88daac64b7546659e84 437 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 8 436 33.197 T 12-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 M634_04185 5f9d5da0c9dec88daac64b7546659e84 437 Gene3D G3DSA:3.40.1190.10 97 299 1.4E-68 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 M634_04185 5f9d5da0c9dec88daac64b7546659e84 437 Pfam PF08245 Mur ligase middle domain 113 279 2.9E-31 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 M634_04185 5f9d5da0c9dec88daac64b7546659e84 437 Pfam PF02875 Mur ligase family, glutamate ligase domain 302 353 9.6E-7 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 M634_04185 5f9d5da0c9dec88daac64b7546659e84 437 Gene3D G3DSA:3.40.50.720 5 96 5.9E-20 T 12-10-2018 M634_04185 5f9d5da0c9dec88daac64b7546659e84 437 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 9 434 4.0E-133 T 12-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 M634_04185 5f9d5da0c9dec88daac64b7546659e84 437 Gene3D G3DSA:3.90.190.20 300 433 1.8E-38 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 M634_04185 5f9d5da0c9dec88daac64b7546659e84 437 SUPERFAMILY SSF51984 9 97 1.02E-17 T 12-10-2018 M634_04185 5f9d5da0c9dec88daac64b7546659e84 437 SUPERFAMILY SSF53623 98 297 4.71E-56 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 M634_23820 e40fbf9418cec2f1f5dede7a02120b00 302 Gene3D G3DSA:1.10.357.140 22 181 1.9E-20 T 12-10-2018 M634_23820 e40fbf9418cec2f1f5dede7a02120b00 302 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 18 294 2.8E-97 T 12-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 M634_23820 e40fbf9418cec2f1f5dede7a02120b00 302 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 70 92 - T 12-10-2018 IPR030470 UbiA prenyltransferase conserved site M634_23820 e40fbf9418cec2f1f5dede7a02120b00 302 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 15 296 19.424 T 12-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 M634_23820 e40fbf9418cec2f1f5dede7a02120b00 302 Pfam PF01040 UbiA prenyltransferase family 32 277 8.6E-62 T 12-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 M634_06440 3e4c9a404abf8266f1129d3058dcc96b 780 SUPERFAMILY SSF82866 617 771 1.44E-20 T 12-10-2018 M634_06440 3e4c9a404abf8266f1129d3058dcc96b 780 SUPERFAMILY SSF82866 230 408 5.62E-21 T 12-10-2018 M634_06440 3e4c9a404abf8266f1129d3058dcc96b 780 Pfam PF03176 MMPL family 73 414 5.2E-12 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 M634_10790 f1226ed4e7c2aecaf19c428c7e427cc2 103 Pfam PF00589 Phage integrase family 3 91 1.7E-18 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 M634_10790 f1226ed4e7c2aecaf19c428c7e427cc2 103 SUPERFAMILY SSF56349 2 101 1.59E-25 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 M634_10790 f1226ed4e7c2aecaf19c428c7e427cc2 103 Gene3D G3DSA:1.10.443.10 1 103 8.6E-26 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 M634_11245 9c45fdfb17c95d01285b9dce96efb73a 346 Hamap MF_01085 UPF0283 membrane protein YcjF [ycjF]. 3 346 33.981 T 12-10-2018 IPR006507 Uncharacterised protein family UPF0283 M634_11245 9c45fdfb17c95d01285b9dce96efb73a 346 Pfam PF05128 Domain of unknown function (DUF697) 181 339 2.4E-49 T 12-10-2018 IPR021147 Protein of unknown function DUF697 M634_11245 9c45fdfb17c95d01285b9dce96efb73a 346 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 66 339 5.9E-75 T 12-10-2018 IPR006507 Uncharacterised protein family UPF0283 M634_22290 603d5e43762f808d8ef8ce77756efd12 568 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 307 1.9E-21 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain M634_22290 603d5e43762f808d8ef8ce77756efd12 568 Gene3D G3DSA:3.40.190.10 122 312 1.0E-40 T 12-10-2018 M634_22290 603d5e43762f808d8ef8ce77756efd12 568 SUPERFAMILY SSF53850 120 557 5.07E-62 T 12-10-2018 M634_22290 603d5e43762f808d8ef8ce77756efd12 568 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 119 7.3E-37 T 12-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain M634_04865 17ce61746a1226e7f708a1f1a601ed17 239 PIRSF PIRSF004808 1 239 6.9E-72 T 12-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 M634_04865 17ce61746a1226e7f708a1f1a601ed17 239 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 238 2.9E-84 T 12-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 M634_04865 17ce61746a1226e7f708a1f1a601ed17 239 SUPERFAMILY SSF75217 5 175 7.19E-38 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases M634_04865 17ce61746a1226e7f708a1f1a601ed17 239 Pfam PF00588 SpoU rRNA Methylase family 5 153 2.6E-35 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 M634_04865 17ce61746a1226e7f708a1f1a601ed17 239 Gene3D G3DSA:3.40.1280.10 1 163 1.3E-62 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal M634_04865 17ce61746a1226e7f708a1f1a601ed17 239 Gene3D G3DSA:1.10.8.590 173 239 7.9E-29 T 12-10-2018 M634_08350 99fedf9b6b61399ed9b777bc8f8b3810 263 SUPERFAMILY SSF89392 107 212 5.1E-5 T 12-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX M634_08350 99fedf9b6b61399ed9b777bc8f8b3810 263 Pfam PF17131 Outer membrane lipoprotein-sorting protein 78 261 5.8E-66 T 12-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein M634_08350 99fedf9b6b61399ed9b777bc8f8b3810 263 Gene3D G3DSA:2.50.20.10 25 261 4.4E-100 T 12-10-2018 M634_12685 74358c7ba9d0554ce09680fadcfee48a 112 Gene3D G3DSA:1.20.120.160 1 112 1.8E-27 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 M634_12685 74358c7ba9d0554ce09680fadcfee48a 112 SUPERFAMILY SSF47226 2 110 5.36E-24 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 M634_12685 74358c7ba9d0554ce09680fadcfee48a 112 Pfam PF01627 Hpt domain 24 102 7.0E-12 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 M634_22020 1a824613338400ab96fa4ad60f5cdd27 191 Pfam PF13505 Outer membrane protein beta-barrel domain 5 191 4.3E-24 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel M634_22020 1a824613338400ab96fa4ad60f5cdd27 191 Gene3D G3DSA:2.40.160.20 25 191 2.8E-25 T 12-10-2018 M634_22020 1a824613338400ab96fa4ad60f5cdd27 191 SUPERFAMILY SSF56925 26 191 5.76E-28 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel M634_04740 ecbb3ba14213f49eb7141837d4173b72 466 Gene3D G3DSA:2.40.30.10 367 453 9.0E-9 T 12-10-2018 M634_04740 ecbb3ba14213f49eb7141837d4173b72 466 Pfam PF01136 Peptidase family U32 80 355 2.4E-96 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 M634_04740 ecbb3ba14213f49eb7141837d4173b72 466 Pfam PF16325 Peptidase family U32 C-terminal domain 372 452 4.7E-21 T 12-10-2018 IPR032525 Peptidase family U32, C-terminal M634_04740 ecbb3ba14213f49eb7141837d4173b72 466 ProSitePatterns PS01276 Peptidase family U32 signature. 167 185 - T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 M634_12145 3b2004e41ca31ecb4ef6d1d26237f301 180 Gene3D G3DSA:3.40.50.850 1 180 4.7E-47 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 M634_12145 3b2004e41ca31ecb4ef6d1d26237f301 180 Pfam PF00857 Isochorismatase family 7 155 5.6E-30 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 M634_12145 3b2004e41ca31ecb4ef6d1d26237f301 180 SUPERFAMILY SSF52499 1 180 1.19E-45 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 M634_16555 63abc269350b6865e3b43c6ad89949af 344 Gene3D G3DSA:3.90.180.10 17 338 1.4E-127 T 12-10-2018 M634_16555 63abc269350b6865e3b43c6ad89949af 344 SUPERFAMILY SSF51735 126 305 2.82E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_16555 63abc269350b6865e3b43c6ad89949af 344 Pfam PF00107 Zinc-binding dehydrogenase 160 296 1.4E-21 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 M634_16555 63abc269350b6865e3b43c6ad89949af 344 SMART SM00829 20 338 4.8E-5 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 M634_16555 63abc269350b6865e3b43c6ad89949af 344 SUPERFAMILY SSF50129 5 145 4.71E-41 T 12-10-2018 IPR011032 GroES-like superfamily M634_16555 63abc269350b6865e3b43c6ad89949af 344 Pfam PF16884 N-terminal domain of oxidoreductase 7 114 4.4E-39 T 12-10-2018 M634_16555 63abc269350b6865e3b43c6ad89949af 344 Gene3D G3DSA:3.40.50.720 129 310 1.4E-127 T 12-10-2018 M634_05375 2ab482946b953fb39a86a58709334b46 482 Gene3D G3DSA:3.30.2130.30 1 174 2.1E-33 T 12-10-2018 M634_05375 2ab482946b953fb39a86a58709334b46 482 SUPERFAMILY SSF52402 174 372 1.17E-42 T 12-10-2018 M634_05375 2ab482946b953fb39a86a58709334b46 482 Gene3D G3DSA:3.40.250.10 400 482 1.6E-10 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M634_05375 2ab482946b953fb39a86a58709334b46 482 SMART SM00981 75 165 8.2E-26 T 12-10-2018 IPR004114 THUMP domain GO:0003723 M634_05375 2ab482946b953fb39a86a58709334b46 482 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 382 482 1.9E-42 T 12-10-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 KEGG: 00730+2.8.1.4 M634_05375 2ab482946b953fb39a86a58709334b46 482 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 2.6E-73 T 12-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 M634_05375 2ab482946b953fb39a86a58709334b46 482 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 482 225.017 T 12-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 M634_05375 2ab482946b953fb39a86a58709334b46 482 SUPERFAMILY SSF143437 1 173 1.62E-47 T 12-10-2018 M634_05375 2ab482946b953fb39a86a58709334b46 482 Pfam PF02926 THUMP domain 45 158 2.5E-24 T 12-10-2018 IPR004114 THUMP domain GO:0003723 M634_05375 2ab482946b953fb39a86a58709334b46 482 SUPERFAMILY SSF52821 402 481 1.83E-12 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily M634_05375 2ab482946b953fb39a86a58709334b46 482 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 376 1.3E-113 T 12-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 M634_05375 2ab482946b953fb39a86a58709334b46 482 Gene3D G3DSA:3.40.50.620 175 399 6.4E-52 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M634_12665 136f722dee44ac8741fa7bbdd8c877cc 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 158 36.085 T 12-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 M634_12665 136f722dee44ac8741fa7bbdd8c877cc 159 SUPERFAMILY SSF55040 11 155 1.96E-61 T 12-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 M634_12665 136f722dee44ac8741fa7bbdd8c877cc 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 6.0E-72 T 12-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 M634_12665 136f722dee44ac8741fa7bbdd8c877cc 159 Pfam PF01967 MoaC family 15 150 9.8E-56 T 12-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 M634_12665 136f722dee44ac8741fa7bbdd8c877cc 159 Gene3D G3DSA:3.30.70.640 1 159 4.9E-70 T 12-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 M634_20870 4f3d7ec7bf8e882228e9bf1b7eab9212 335 PIRSF PIRSF000267 1 335 3.6E-90 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 M634_20870 4f3d7ec7bf8e882228e9bf1b7eab9212 335 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 5 324 4.7E-98 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 M634_20870 4f3d7ec7bf8e882228e9bf1b7eab9212 335 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 5 213 9.1E-44 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 M634_22275 94937eb0607d6a7413b62889a212a30f 262 Pfam PF01435 Peptidase family M48 70 246 4.5E-46 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 M634_22275 94937eb0607d6a7413b62889a212a30f 262 Gene3D G3DSA:3.30.2010.10 52 139 1.6E-7 T 12-10-2018 M634_16950 5b5855f1f971ed3633af1fa10fbf30cb 563 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 4 553 2.6E-102 T 12-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 M634_16950 5b5855f1f971ed3633af1fa10fbf30cb 563 Pfam PF02652 L-lactate permease 7 548 2.4E-106 T 12-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 M634_18110 35eef0e238b5bc6b4cb6d61eb8b75000 227 Gene3D G3DSA:3.10.620.30 23 213 6.7E-71 T 12-10-2018 M634_18110 35eef0e238b5bc6b4cb6d61eb8b75000 227 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 62 168 2.5E-12 T 12-10-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted M634_00195 5e71000e03d5f27f64adbd0bd45bb895 505 SUPERFAMILY SSF52540 13 221 1.94E-10 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_00195 5e71000e03d5f27f64adbd0bd45bb895 505 Gene3D G3DSA:3.30.70.1070 405 502 1.4E-26 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 M634_00195 5e71000e03d5f27f64adbd0bd45bb895 505 Pfam PF05036 Sporulation related domain 418 491 4.1E-8 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 M634_00195 5e71000e03d5f27f64adbd0bd45bb895 505 Pfam PF13401 AAA domain 27 128 7.4E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_00195 5e71000e03d5f27f64adbd0bd45bb895 505 Gene3D G3DSA:3.40.50.300 10 162 6.2E-7 T 12-10-2018 M634_14370 ee7f65b02d0714e066fd39fda9d686ce 354 PIRSF PIRSF005096 6 354 1.3E-118 T 12-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 M634_14370 ee7f65b02d0714e066fd39fda9d686ce 354 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 178 187 - T 12-10-2018 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 M634_14370 ee7f65b02d0714e066fd39fda9d686ce 354 SUPERFAMILY SSF74650 14 352 5.97E-113 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 M634_14370 ee7f65b02d0714e066fd39fda9d686ce 354 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 20 353 9.9E-152 T 12-10-2018 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 M634_14370 ee7f65b02d0714e066fd39fda9d686ce 354 Gene3D G3DSA:2.70.98.10 14 353 1.4E-121 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 M634_14370 ee7f65b02d0714e066fd39fda9d686ce 354 Pfam PF01263 Aldose 1-epimerase 25 351 2.3E-95 T 12-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 M634_04120 35f1214898f8f23a3376a9da8f6b471a 211 SUPERFAMILY SSF52833 11 110 1.47E-21 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M634_04120 35f1214898f8f23a3376a9da8f6b471a 211 Gene3D G3DSA:1.20.1050.10 89 193 9.0E-79 T 12-10-2018 M634_04120 35f1214898f8f23a3376a9da8f6b471a 211 Gene3D G3DSA:3.40.30.10 11 202 9.0E-79 T 12-10-2018 M634_04120 35f1214898f8f23a3376a9da8f6b471a 211 SUPERFAMILY SSF47616 82 208 1.34E-23 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily M634_04120 35f1214898f8f23a3376a9da8f6b471a 211 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 87 1.4E-16 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 M634_04120 35f1214898f8f23a3376a9da8f6b471a 211 Pfam PF00043 Glutathione S-transferase, C-terminal domain 105 194 5.3E-9 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal M634_21360 6f02c67ecf70a8a1aac846679031cbe2 410 Pfam PF07690 Major Facilitator Superfamily 15 295 3.3E-30 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M634_21360 6f02c67ecf70a8a1aac846679031cbe2 410 Gene3D G3DSA:1.20.1250.20 3 401 7.1E-57 T 12-10-2018 M634_21360 6f02c67ecf70a8a1aac846679031cbe2 410 SUPERFAMILY SSF103473 9 398 8.63E-57 T 12-10-2018 IPR036259 MFS transporter superfamily M634_24005 854121dd9f24f84881f478ed205ac16f 244 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 46 196 3.4E-5 T 12-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 M634_24005 854121dd9f24f84881f478ed205ac16f 244 Gene3D G3DSA:3.40.50.300 63 242 1.7E-41 T 12-10-2018 M634_24005 854121dd9f24f84881f478ed205ac16f 244 Gene3D G3DSA:3.40.50.300 19 61 1.2E-5 T 12-10-2018 M634_24005 854121dd9f24f84881f478ed205ac16f 244 SUPERFAMILY SSF52540 21 226 3.91E-28 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_00765 970b2569037946ba84462e7e18ff496e 165 Pfam PF02308 MgtC family 19 141 7.4E-28 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 M634_00765 970b2569037946ba84462e7e18ff496e 165 PRINTS PR01837 MgtC/SapB protein signature 41 59 1.2E-31 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 M634_00765 970b2569037946ba84462e7e18ff496e 165 PRINTS PR01837 MgtC/SapB protein signature 95 119 1.2E-31 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 M634_00765 970b2569037946ba84462e7e18ff496e 165 PRINTS PR01837 MgtC/SapB protein signature 22 41 1.2E-31 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 M634_00765 970b2569037946ba84462e7e18ff496e 165 PRINTS PR01837 MgtC/SapB protein signature 68 90 1.2E-31 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 M634_22860 35dd842f3e1f588ee35296e77151675b 613 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 403 430 4.7E-4 T 12-10-2018 IPR001434 Domain of unknown function DUF11 M634_22860 35dd842f3e1f588ee35296e77151675b 613 Gene3D G3DSA:3.40.390.10 117 216 5.1E-6 T 12-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 M634_22860 35dd842f3e1f588ee35296e77151675b 613 Gene3D G3DSA:2.60.40.10 392 502 4.4E-7 T 12-10-2018 IPR013783 Immunoglobulin-like fold M634_22860 35dd842f3e1f588ee35296e77151675b 613 Pfam PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase 410 483 1.3E-7 T 12-10-2018 IPR018905 Alpha-galactosidase, NEW3 domain M634_22860 35dd842f3e1f588ee35296e77151675b 613 SUPERFAMILY SSF55486 82 230 2.59E-11 T 12-10-2018 M634_22860 35dd842f3e1f588ee35296e77151675b 613 Pfam PF05548 Gametolysin peptidase M11 114 247 1.6E-6 T 12-10-2018 IPR008752 Peptidase M11, gametolysin M634_16500 93911f9ad41756ed23ed02bc095a9520 177 Pfam PF10531 SLBB domain 105 158 2.5E-16 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M634_16500 93911f9ad41756ed23ed02bc095a9520 177 Gene3D G3DSA:3.30.1950.10 31 103 3.3E-22 T 12-10-2018 M634_16500 93911f9ad41756ed23ed02bc095a9520 177 Pfam PF02563 Polysaccharide biosynthesis/export protein 24 99 6.8E-18 T 12-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 M634_16500 93911f9ad41756ed23ed02bc095a9520 177 SUPERFAMILY SSF142984 103 139 7.19E-5 T 12-10-2018 M634_16500 93911f9ad41756ed23ed02bc095a9520 177 Gene3D G3DSA:3.10.560.10 20 168 3.3E-22 T 12-10-2018 M634_19520 a753a367c21756a101bde8e0c2a77bdb 373 Hamap MF_00416 Flagellar P-ring protein [flgI]. 10 373 36.817 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M634_19520 a753a367c21756a101bde8e0c2a77bdb 373 PRINTS PR01010 Flagellar P-ring protein signature 90 109 7.3E-77 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M634_19520 a753a367c21756a101bde8e0c2a77bdb 373 PRINTS PR01010 Flagellar P-ring protein signature 64 79 7.3E-77 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M634_19520 a753a367c21756a101bde8e0c2a77bdb 373 PRINTS PR01010 Flagellar P-ring protein signature 129 147 7.3E-77 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M634_19520 a753a367c21756a101bde8e0c2a77bdb 373 PRINTS PR01010 Flagellar P-ring protein signature 112 129 7.3E-77 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M634_19520 a753a367c21756a101bde8e0c2a77bdb 373 PRINTS PR01010 Flagellar P-ring protein signature 170 188 7.3E-77 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M634_19520 a753a367c21756a101bde8e0c2a77bdb 373 PRINTS PR01010 Flagellar P-ring protein signature 30 45 7.3E-77 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M634_19520 a753a367c21756a101bde8e0c2a77bdb 373 PRINTS PR01010 Flagellar P-ring protein signature 45 60 7.3E-77 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M634_19520 a753a367c21756a101bde8e0c2a77bdb 373 PRINTS PR01010 Flagellar P-ring protein signature 196 214 7.3E-77 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M634_19520 a753a367c21756a101bde8e0c2a77bdb 373 PRINTS PR01010 Flagellar P-ring protein signature 260 272 7.3E-77 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M634_19520 a753a367c21756a101bde8e0c2a77bdb 373 Pfam PF02119 Flagellar P-ring protein 31 372 6.7E-136 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 M634_14870 ee410a63d1cebcca1261c400fe62aeb3 865 Gene3D G3DSA:3.20.19.10 162 361 2.5E-82 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 M634_14870 ee410a63d1cebcca1261c400fe62aeb3 865 SUPERFAMILY SSF52016 162 372 2.2E-72 T 12-10-2018 M634_14870 ee410a63d1cebcca1261c400fe62aeb3 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 5.4E-67 T 12-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 M634_14870 ee410a63d1cebcca1261c400fe62aeb3 865 SUPERFAMILY SSF53732 379 861 8.89E-148 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 M634_14870 ee410a63d1cebcca1261c400fe62aeb3 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 M634_14870 ee410a63d1cebcca1261c400fe62aeb3 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 2.7E-101 T 12-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 M634_14870 ee410a63d1cebcca1261c400fe62aeb3 865 Gene3D G3DSA:3.40.1060.10 385 681 2.9E-149 T 12-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 M634_14870 ee410a63d1cebcca1261c400fe62aeb3 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 853 0.0 T 12-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 M634_14870 ee410a63d1cebcca1261c400fe62aeb3 865 Gene3D G3DSA:3.30.499.10 402 529 2.9E-149 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 M634_14870 ee410a63d1cebcca1261c400fe62aeb3 865 Gene3D G3DSA:1.25.40.310 1 161 1.8E-72 T 12-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 M634_14870 ee410a63d1cebcca1261c400fe62aeb3 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 2.3E-42 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 M634_14870 ee410a63d1cebcca1261c400fe62aeb3 865 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 M634_14870 ee410a63d1cebcca1261c400fe62aeb3 865 PIRSF PIRSF036687 1 859 0.0 T 12-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 M634_14870 ee410a63d1cebcca1261c400fe62aeb3 865 SUPERFAMILY SSF74778 2 160 5.23E-68 T 12-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 M634_14870 ee410a63d1cebcca1261c400fe62aeb3 865 Gene3D G3DSA:3.30.499.10 683 865 8.1E-73 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 M634_23330 d5b6efd572d7bbc4a4cab545aaa8f0d3 215 Gene3D G3DSA:1.20.1050.10 84 191 1.4E-56 T 12-10-2018 M634_23330 d5b6efd572d7bbc4a4cab545aaa8f0d3 215 SUPERFAMILY SSF47616 83 201 3.56E-14 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily M634_23330 d5b6efd572d7bbc4a4cab545aaa8f0d3 215 SUPERFAMILY SSF52833 3 84 4.1E-15 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M634_23330 d5b6efd572d7bbc4a4cab545aaa8f0d3 215 Gene3D G3DSA:3.40.30.10 5 195 1.4E-56 T 12-10-2018 M634_23330 d5b6efd572d7bbc4a4cab545aaa8f0d3 215 Pfam PF13417 Glutathione S-transferase, N-terminal domain 9 77 2.7E-9 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 M634_01920 02083e64e50699e0ccc3e42d27b88237 513 SUPERFAMILY SSF50615 10 94 3.73E-26 T 12-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M634_01920 02083e64e50699e0ccc3e42d27b88237 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 5.5E-14 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M634_01920 02083e64e50699e0ccc3e42d27b88237 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 2.2E-251 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_01920 02083e64e50699e0ccc3e42d27b88237 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 1.5E-44 T 12-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_01920 02083e64e50699e0ccc3e42d27b88237 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 49.709 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_01920 02083e64e50699e0ccc3e42d27b88237 513 SUPERFAMILY SSF47917 383 511 8.63E-46 T 12-10-2018 M634_01920 02083e64e50699e0ccc3e42d27b88237 513 Gene3D G3DSA:1.20.150.20 383 513 2.6E-48 T 12-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_01920 02083e64e50699e0ccc3e42d27b88237 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M634_01920 02083e64e50699e0ccc3e42d27b88237 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 2.3E-71 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M634_01920 02083e64e50699e0ccc3e42d27b88237 513 SUPERFAMILY SSF52540 96 381 6.88E-94 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_01920 02083e64e50699e0ccc3e42d27b88237 513 Gene3D G3DSA:2.40.30.20 1 93 5.8E-30 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 M634_01920 02083e64e50699e0ccc3e42d27b88237 513 Gene3D G3DSA:3.40.50.300 94 382 2.2E-129 T 12-10-2018 M634_15625 18182e138a639900bdb9d93936ce6e8a 477 Gene3D G3DSA:3.40.309.10 256 443 6.4E-167 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 M634_15625 18182e138a639900bdb9d93936ce6e8a 477 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 249 256 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 M634_15625 18182e138a639900bdb9d93936ce6e8a 477 SUPERFAMILY SSF53720 15 474 2.23E-153 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 M634_15625 18182e138a639900bdb9d93936ce6e8a 477 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 277 288 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 M634_15625 18182e138a639900bdb9d93936ce6e8a 477 Gene3D G3DSA:3.40.605.10 16 466 6.4E-167 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 M634_15625 18182e138a639900bdb9d93936ce6e8a 477 Pfam PF00171 Aldehyde dehydrogenase family 22 470 1.2E-158 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 M634_15625 18182e138a639900bdb9d93936ce6e8a 477 PIRSF PIRSF036492 9 474 6.8E-84 T 12-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 M634_06045 214615543cd9f251ce2df5b0b761d6bf 761 Gene3D G3DSA:2.60.120.260 51 178 1.6E-19 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily M634_06045 214615543cd9f251ce2df5b0b761d6bf 761 PRINTS PR01440 Cellulose synthase subunit B signature 124 147 6.1E-38 T 12-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 M634_06045 214615543cd9f251ce2df5b0b761d6bf 761 PRINTS PR01440 Cellulose synthase subunit B signature 540 560 6.1E-38 T 12-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 M634_06045 214615543cd9f251ce2df5b0b761d6bf 761 PRINTS PR01440 Cellulose synthase subunit B signature 503 522 6.1E-38 T 12-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 M634_06045 214615543cd9f251ce2df5b0b761d6bf 761 PRINTS PR01440 Cellulose synthase subunit B signature 699 719 6.1E-38 T 12-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 M634_06045 214615543cd9f251ce2df5b0b761d6bf 761 PRINTS PR01440 Cellulose synthase subunit B signature 75 96 6.1E-38 T 12-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 M634_06045 214615543cd9f251ce2df5b0b761d6bf 761 PRINTS PR01440 Cellulose synthase subunit B signature 207 230 6.1E-38 T 12-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 M634_06045 214615543cd9f251ce2df5b0b761d6bf 761 PRINTS PR01440 Cellulose synthase subunit B signature 455 474 6.1E-38 T 12-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 M634_06045 214615543cd9f251ce2df5b0b761d6bf 761 PRINTS PR01440 Cellulose synthase subunit B signature 288 309 6.1E-38 T 12-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 M634_06045 214615543cd9f251ce2df5b0b761d6bf 761 PRINTS PR01440 Cellulose synthase subunit B signature 165 186 6.1E-38 T 12-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 M634_06045 214615543cd9f251ce2df5b0b761d6bf 761 PRINTS PR01440 Cellulose synthase subunit B signature 371 392 6.1E-38 T 12-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 M634_06045 214615543cd9f251ce2df5b0b761d6bf 761 Pfam PF03170 Bacterial cellulose synthase subunit 49 659 2.4E-206 T 12-10-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 M634_06045 214615543cd9f251ce2df5b0b761d6bf 761 Gene3D G3DSA:2.60.120.260 337 495 7.1E-29 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily M634_16805 93a8f6652de7f48dd2992bcd10201c44 666 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 14 390 3.7E-23 T 12-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 M634_16805 93a8f6652de7f48dd2992bcd10201c44 666 SUPERFAMILY SSF50993 14 388 1.15E-30 T 12-10-2018 M634_16805 93a8f6652de7f48dd2992bcd10201c44 666 Gene3D G3DSA:3.40.50.1820 22 656 4.8E-145 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_16805 93a8f6652de7f48dd2992bcd10201c44 666 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 515 535 6.5E-35 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M634_16805 93a8f6652de7f48dd2992bcd10201c44 666 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 458 482 6.5E-35 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M634_16805 93a8f6652de7f48dd2992bcd10201c44 666 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 432 450 6.5E-35 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M634_16805 93a8f6652de7f48dd2992bcd10201c44 666 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 573 588 6.5E-35 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M634_16805 93a8f6652de7f48dd2992bcd10201c44 666 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 591 613 6.5E-35 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M634_16805 93a8f6652de7f48dd2992bcd10201c44 666 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 486 505 6.5E-35 T 12-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 M634_16805 93a8f6652de7f48dd2992bcd10201c44 666 Gene3D G3DSA:2.130.10.120 73 393 4.8E-145 T 12-10-2018 M634_16805 93a8f6652de7f48dd2992bcd10201c44 666 SUPERFAMILY SSF53474 405 655 1.7E-37 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_16805 93a8f6652de7f48dd2992bcd10201c44 666 Pfam PF00326 Prolyl oligopeptidase family 447 660 1.9E-55 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 M634_18905 357376c4b9881db4b846ad92d214800c 308 Gene3D G3DSA:3.40.50.1980 32 180 3.9E-31 T 12-10-2018 M634_18905 357376c4b9881db4b846ad92d214800c 308 PRINTS PR00691 Adhesin B signature 128 147 2.3E-8 T 12-10-2018 IPR006129 Adhesin B GO:0007155 M634_18905 357376c4b9881db4b846ad92d214800c 308 PRINTS PR00691 Adhesin B signature 53 71 2.3E-8 T 12-10-2018 IPR006129 Adhesin B GO:0007155 M634_18905 357376c4b9881db4b846ad92d214800c 308 PRINTS PR00691 Adhesin B signature 72 91 2.3E-8 T 12-10-2018 IPR006129 Adhesin B GO:0007155 M634_18905 357376c4b9881db4b846ad92d214800c 308 PRINTS PR00691 Adhesin B signature 28 49 2.3E-8 T 12-10-2018 IPR006129 Adhesin B GO:0007155 M634_18905 357376c4b9881db4b846ad92d214800c 308 PRINTS PR00691 Adhesin B signature 235 252 2.3E-8 T 12-10-2018 IPR006129 Adhesin B GO:0007155 M634_18905 357376c4b9881db4b846ad92d214800c 308 SUPERFAMILY SSF53807 27 297 7.85E-63 T 12-10-2018 M634_18905 357376c4b9881db4b846ad92d214800c 308 Pfam PF01297 Zinc-uptake complex component A periplasmic 34 295 3.3E-45 T 12-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 M634_18905 357376c4b9881db4b846ad92d214800c 308 Gene3D G3DSA:3.40.50.1980 191 297 1.9E-20 T 12-10-2018 M634_18905 357376c4b9881db4b846ad92d214800c 308 PRINTS PR00690 Adhesin family signature 72 89 1.4E-7 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 M634_18905 357376c4b9881db4b846ad92d214800c 308 PRINTS PR00690 Adhesin family signature 239 257 1.4E-7 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 M634_18905 357376c4b9881db4b846ad92d214800c 308 PRINTS PR00690 Adhesin family signature 59 72 1.4E-7 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 M634_18905 357376c4b9881db4b846ad92d214800c 308 PRINTS PR00690 Adhesin family signature 186 207 1.4E-7 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 M634_05150 22d0639a5e0254214945d920c3117424 115 SUPERFAMILY SSF54285 6 82 6.54E-26 T 12-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp M634_05150 22d0639a5e0254214945d920c3117424 115 Hamap MF_00460 Protein RnfH [rnfH]. 8 98 24.788 T 12-10-2018 IPR005346 RnfH protein M634_05150 22d0639a5e0254214945d920c3117424 115 Pfam PF03658 RnfH family Ubiquitin 8 90 5.4E-34 T 12-10-2018 IPR005346 RnfH protein M634_05150 22d0639a5e0254214945d920c3117424 115 Gene3D G3DSA:3.10.20.280 2 92 2.0E-33 T 12-10-2018 IPR037021 RnfH superfamily M634_00115 e0919484f9f3f7cfc94b2f07462556e1 326 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 6 320 6.4E-161 T 12-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 M634_00115 e0919484f9f3f7cfc94b2f07462556e1 326 Gene3D G3DSA:3.20.20.70 4 245 8.5E-73 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_00115 e0919484f9f3f7cfc94b2f07462556e1 326 Pfam PF01207 Dihydrouridine synthase (Dus) 9 315 2.9E-95 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 M634_00115 e0919484f9f3f7cfc94b2f07462556e1 326 SUPERFAMILY SSF51395 6 319 2.77E-75 T 12-10-2018 M634_00115 e0919484f9f3f7cfc94b2f07462556e1 326 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 87 105 - T 12-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 M634_00115 e0919484f9f3f7cfc94b2f07462556e1 326 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 322 53.452 T 12-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 M634_00115 e0919484f9f3f7cfc94b2f07462556e1 326 Gene3D G3DSA:1.20.120.1460 250 325 1.6E-23 T 12-10-2018 M634_00115 e0919484f9f3f7cfc94b2f07462556e1 326 PIRSF PIRSF006621 1 323 1.7E-75 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 M634_06805 6e653d5b8449cac98c986c2c8470eee8 107 Gene3D G3DSA:3.30.70.20 2 103 9.7E-26 T 12-10-2018 M634_06805 6e653d5b8449cac98c986c2c8470eee8 107 Pfam PF13187 4Fe-4S dicluster domain 8 55 7.2E-7 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M634_06805 6e653d5b8449cac98c986c2c8470eee8 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 5.1E-11 T 12-10-2018 IPR000813 7Fe ferredoxin GO:0009055 M634_06805 6e653d5b8449cac98c986c2c8470eee8 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 5.1E-11 T 12-10-2018 IPR000813 7Fe ferredoxin GO:0009055 M634_06805 6e653d5b8449cac98c986c2c8470eee8 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 5.1E-11 T 12-10-2018 IPR000813 7Fe ferredoxin GO:0009055 M634_06805 6e653d5b8449cac98c986c2c8470eee8 107 SUPERFAMILY SSF54862 3 96 1.24E-22 T 12-10-2018 M634_06805 6e653d5b8449cac98c986c2c8470eee8 107 Pfam PF11953 Domain of unknown function (DUF3470) 68 107 9.9E-17 T 12-10-2018 IPR022569 Ferredoxin, C-terminal M634_15000 d1aeb6b04d1adb55df06ae0f43c3bf35 407 Gene3D G3DSA:1.20.81.30 259 370 4.7E-27 T 12-10-2018 M634_15000 d1aeb6b04d1adb55df06ae0f43c3bf35 407 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 167 195 - T 12-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 M634_15000 d1aeb6b04d1adb55df06ae0f43c3bf35 407 Pfam PF00482 Type II secretion system (T2SS), protein F 276 398 1.3E-27 T 12-10-2018 IPR018076 Type II secretion system F domain M634_15000 d1aeb6b04d1adb55df06ae0f43c3bf35 407 Pfam PF00482 Type II secretion system (T2SS), protein F 72 195 2.4E-33 T 12-10-2018 IPR018076 Type II secretion system F domain M634_15000 d1aeb6b04d1adb55df06ae0f43c3bf35 407 Gene3D G3DSA:1.20.81.30 58 174 4.2E-30 T 12-10-2018 M634_15000 d1aeb6b04d1adb55df06ae0f43c3bf35 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 387 406 1.0E-18 T 12-10-2018 IPR003004 GspF/PilC family M634_15000 d1aeb6b04d1adb55df06ae0f43c3bf35 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 371 385 1.0E-18 T 12-10-2018 IPR003004 GspF/PilC family M634_15000 d1aeb6b04d1adb55df06ae0f43c3bf35 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 68 80 1.0E-18 T 12-10-2018 IPR003004 GspF/PilC family M634_15000 d1aeb6b04d1adb55df06ae0f43c3bf35 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 167 195 1.0E-18 T 12-10-2018 IPR003004 GspF/PilC family M634_21410 7bcbf0764ab46f8612e4f85c72d844ff 314 Gene3D G3DSA:1.10.1580.10 177 268 5.0E-29 T 12-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily M634_21410 7bcbf0764ab46f8612e4f85c72d844ff 314 SUPERFAMILY SSF52540 12 186 3.0E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_21410 7bcbf0764ab46f8612e4f85c72d844ff 314 PIRSF PIRSF006230 2 280 1.3E-105 T 12-10-2018 IPR016478 GTPase, MTG1 M634_21410 7bcbf0764ab46f8612e4f85c72d844ff 314 Gene3D G3DSA:3.40.50.300 6 174 2.1E-43 T 12-10-2018 M634_21410 7bcbf0764ab46f8612e4f85c72d844ff 314 Pfam PF01926 50S ribosome-binding GTPase 120 184 4.4E-14 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M634_21410 7bcbf0764ab46f8612e4f85c72d844ff 314 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 6 275 1.5E-108 T 12-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis M634_04400 5a3f048ad3966b6c4c8b68424ef0ff9a 493 PRINTS PR00175 Sodium/alanine symporter signature 103 125 3.3E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M634_04400 5a3f048ad3966b6c4c8b68424ef0ff9a 493 PRINTS PR00175 Sodium/alanine symporter signature 366 388 3.3E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M634_04400 5a3f048ad3966b6c4c8b68424ef0ff9a 493 PRINTS PR00175 Sodium/alanine symporter signature 194 212 3.3E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M634_04400 5a3f048ad3966b6c4c8b68424ef0ff9a 493 PRINTS PR00175 Sodium/alanine symporter signature 222 241 3.3E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M634_04400 5a3f048ad3966b6c4c8b68424ef0ff9a 493 PRINTS PR00175 Sodium/alanine symporter signature 319 337 3.3E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M634_04400 5a3f048ad3966b6c4c8b68424ef0ff9a 493 PRINTS PR00175 Sodium/alanine symporter signature 427 447 3.3E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M634_04400 5a3f048ad3966b6c4c8b68424ef0ff9a 493 TIGRFAM TIGR00835 agcS: amino acid carrier protein 29 458 1.6E-163 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M634_04400 5a3f048ad3966b6c4c8b68424ef0ff9a 493 Pfam PF01235 Sodium:alanine symporter family 64 469 6.4E-163 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M634_04400 5a3f048ad3966b6c4c8b68424ef0ff9a 493 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 103 118 - T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M634_23135 f9620de60ed80b463ad0756b5068cb25 398 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 3 395 1.3E-126 T 12-10-2018 IPR017735 Type VI secretion system, FHA domain-containing protein M634_23135 f9620de60ed80b463ad0756b5068cb25 398 Gene3D G3DSA:2.60.200.20 4 121 8.0E-21 T 12-10-2018 M634_23135 f9620de60ed80b463ad0756b5068cb25 398 Pfam PF00498 FHA domain 32 101 1.2E-15 T 12-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 M634_23135 f9620de60ed80b463ad0756b5068cb25 398 SMART SM00240 31 82 1.1E-8 T 12-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 M634_23135 f9620de60ed80b463ad0756b5068cb25 398 SUPERFAMILY SSF49879 28 111 7.65E-22 T 12-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 M634_17405 9e4997fcc80902836ff3122e23398c0c 162 Gene3D G3DSA:3.40.630.30 6 162 9.3E-27 T 12-10-2018 M634_17405 9e4997fcc80902836ff3122e23398c0c 162 Pfam PF00583 Acetyltransferase (GNAT) family 38 149 1.9E-14 T 12-10-2018 IPR000182 GNAT domain M634_17405 9e4997fcc80902836ff3122e23398c0c 162 SUPERFAMILY SSF55729 4 155 4.09E-23 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_03000 0ff0a05ba1858eb24829f72ef0f8cf3a 354 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 326 3.5E-100 T 12-10-2018 IPR016040 NAD(P)-binding domain M634_03000 0ff0a05ba1858eb24829f72ef0f8cf3a 354 Gene3D G3DSA:3.90.25.10 201 333 8.5E-140 T 12-10-2018 M634_03000 0ff0a05ba1858eb24829f72ef0f8cf3a 354 SUPERFAMILY SSF51735 1 338 8.06E-95 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_03000 0ff0a05ba1858eb24829f72ef0f8cf3a 354 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 339 1.6E-160 T 12-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 M634_03000 0ff0a05ba1858eb24829f72ef0f8cf3a 354 Gene3D G3DSA:3.40.50.720 2 325 8.5E-140 T 12-10-2018 M634_14730 6d8d9db5ffef655c7562e776f4a62078 315 SUPERFAMILY SSF161093 133 312 1.96E-44 T 12-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 M634_14730 6d8d9db5ffef655c7562e776f4a62078 315 Gene3D G3DSA:1.10.357.20 128 312 1.9E-52 T 12-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain M634_14730 6d8d9db5ffef655c7562e776f4a62078 315 Pfam PF01769 Divalent cation transporter 176 305 1.6E-26 T 12-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 M634_07530 aa30ff2e07f05694d9cbbf88febee2a5 430 Gene3D G3DSA:3.30.70.1990 282 363 3.2E-26 T 12-10-2018 M634_07530 aa30ff2e07f05694d9cbbf88febee2a5 430 Pfam PF01593 Flavin containing amine oxidoreductase 10 303 6.2E-18 T 12-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 M634_07530 aa30ff2e07f05694d9cbbf88febee2a5 430 Gene3D G3DSA:3.50.50.60 3 397 3.2E-26 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_07530 aa30ff2e07f05694d9cbbf88febee2a5 430 Gene3D G3DSA:1.10.405.20 75 199 3.2E-26 T 12-10-2018 M634_07530 aa30ff2e07f05694d9cbbf88febee2a5 430 SUPERFAMILY SSF51905 1 413 2.33E-49 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_03760 8a43597352607ff4c01ddbfdcbaa573a 253 SUPERFAMILY SSF100950 78 234 2.18E-31 T 12-10-2018 IPR037171 NagB/RpiA transferase-like M634_03760 8a43597352607ff4c01ddbfdcbaa573a 253 Pfam PF08220 DeoR-like helix-turn-helix domain 9 62 1.9E-15 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 M634_03760 8a43597352607ff4c01ddbfdcbaa573a 253 SUPERFAMILY SSF46785 3 67 4.69E-13 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_03760 8a43597352607ff4c01ddbfdcbaa573a 253 SMART SM01134 73 234 2.4E-58 T 12-10-2018 M634_03760 8a43597352607ff4c01ddbfdcbaa573a 253 SMART SM00420 9 61 7.3E-14 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 M634_03760 8a43597352607ff4c01ddbfdcbaa573a 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 M634_03760 8a43597352607ff4c01ddbfdcbaa573a 253 Pfam PF00455 DeoR C terminal sensor domain 77 232 4.1E-45 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain M634_03760 8a43597352607ff4c01ddbfdcbaa573a 253 Gene3D G3DSA:1.10.10.10 1 56 4.0E-5 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_03760 8a43597352607ff4c01ddbfdcbaa573a 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 2.3E-6 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 M634_03760 8a43597352607ff4c01ddbfdcbaa573a 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 2.3E-6 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 M634_10535 c932fbc90435dde8a38c9514cad366fc 148 SUPERFAMILY SSF55729 1 145 1.32E-19 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_10535 c932fbc90435dde8a38c9514cad366fc 148 Gene3D G3DSA:3.40.630.30 1 147 4.2E-18 T 12-10-2018 M634_10535 c932fbc90435dde8a38c9514cad366fc 148 Pfam PF13673 Acetyltransferase (GNAT) domain 27 145 1.3E-26 T 12-10-2018 IPR000182 GNAT domain M634_24330 b83565304885f1f86c8dc16cb614a23c 456 Pfam PF04055 Radical SAM superfamily 67 237 3.2E-14 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 M634_24330 b83565304885f1f86c8dc16cb614a23c 456 Gene3D G3DSA:3.80.30.20 39 364 8.6E-72 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe M634_24330 b83565304885f1f86c8dc16cb614a23c 456 SUPERFAMILY SSF102114 55 439 8.5E-82 T 12-10-2018 M634_24330 b83565304885f1f86c8dc16cb614a23c 456 TIGRFAM TIGR04107 rSAM_HutW: putative heme utilization radical SAM enzyme HutW 23 442 6.8E-178 T 12-10-2018 IPR026332 Putative heme utilization radical SAM enzyme HutW M634_24330 b83565304885f1f86c8dc16cb614a23c 456 SMART SM00729 62 285 2.2E-41 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 M634_00695 74b8aaa39483127b0395537926a249b0 318 SUPERFAMILY SSF64182 5 317 1.1E-44 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily M634_05465 a973802c34477ec6a8ffedb2c5e7471a 474 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 7 460 6.5E-207 T 12-10-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00500+2.7.1.201 M634_05465 a973802c34477ec6a8ffedb2c5e7471a 474 SUPERFAMILY SSF55604 9 81 3.66E-21 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 M634_05465 a973802c34477ec6a8ffedb2c5e7471a 474 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 M634_05465 a973802c34477ec6a8ffedb2c5e7471a 474 Pfam PF02378 Phosphotransferase system, EIIC 112 404 4.9E-33 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 M634_05465 a973802c34477ec6a8ffedb2c5e7471a 474 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 30 111 9.4E-17 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 M634_05465 a973802c34477ec6a8ffedb2c5e7471a 474 Gene3D G3DSA:3.30.1360.60 3 78 4.7E-24 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 M634_05465 a973802c34477ec6a8ffedb2c5e7471a 474 Pfam PF00367 phosphotransferase system, EIIB 11 43 1.4E-14 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 M634_16640 502cd03253eb8bb73877f9afe848ff48 348 Pfam PF13493 Domain of unknown function (DUF4118) 15 118 1.0E-21 T 12-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain M634_16640 502cd03253eb8bb73877f9afe848ff48 348 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 238 342 6.5E-18 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_16640 502cd03253eb8bb73877f9afe848ff48 348 SMART SM00387 233 343 5.9E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_16640 502cd03253eb8bb73877f9afe848ff48 348 Gene3D G3DSA:1.10.287.130 113 194 4.8E-13 T 12-10-2018 M634_16640 502cd03253eb8bb73877f9afe848ff48 348 SMART SM00388 123 191 7.0E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_16640 502cd03253eb8bb73877f9afe848ff48 348 Pfam PF00512 His Kinase A (phospho-acceptor) domain 130 191 9.2E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_16640 502cd03253eb8bb73877f9afe848ff48 348 SUPERFAMILY SSF55874 181 341 3.14E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_16640 502cd03253eb8bb73877f9afe848ff48 348 Gene3D G3DSA:1.20.120.620 10 112 9.5E-17 T 12-10-2018 IPR038318 KdpD, transmembrane domain superfamily M634_16640 502cd03253eb8bb73877f9afe848ff48 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 327 340 1.7E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_16640 502cd03253eb8bb73877f9afe848ff48 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 288 298 1.7E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_16640 502cd03253eb8bb73877f9afe848ff48 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 270 284 1.7E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_16640 502cd03253eb8bb73877f9afe848ff48 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 304 322 1.7E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_16640 502cd03253eb8bb73877f9afe848ff48 348 SUPERFAMILY SSF47384 112 192 7.06E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M634_16640 502cd03253eb8bb73877f9afe848ff48 348 Gene3D G3DSA:3.30.565.10 197 347 5.6E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_07685 4e3891ae51d6fdd4b41905dae20ff76f 293 SUPERFAMILY SSF46785 3 84 2.72E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_07685 4e3891ae51d6fdd4b41905dae20ff76f 293 Pfam PF03466 LysR substrate binding domain 91 247 4.9E-20 T 12-10-2018 IPR005119 LysR, substrate-binding M634_07685 4e3891ae51d6fdd4b41905dae20ff76f 293 Gene3D G3DSA:3.40.190.290 93 287 4.0E-36 T 12-10-2018 M634_07685 4e3891ae51d6fdd4b41905dae20ff76f 293 Gene3D G3DSA:1.10.10.10 2 87 1.6E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_07685 4e3891ae51d6fdd4b41905dae20ff76f 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.3E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_07685 4e3891ae51d6fdd4b41905dae20ff76f 293 SUPERFAMILY SSF53850 92 291 1.29E-25 T 12-10-2018 M634_10945 4b129f81665b7f9482f2270f11d72128 147 Pfam PF09346 SMI1 / KNR4 family (SUKH-1) 22 134 8.7E-8 T 12-10-2018 IPR018958 Knr4/Smi1-like domain M634_10945 4b129f81665b7f9482f2270f11d72128 147 SUPERFAMILY SSF160631 5 144 6.54E-11 T 12-10-2018 M634_10945 4b129f81665b7f9482f2270f11d72128 147 Gene3D G3DSA:3.40.1580.10 11 146 1.7E-9 T 12-10-2018 IPR037883 Knr4/Smi1-like domain superfamily M634_04510 0d1aff9db6ba8e4972c02db929f0b3db 385 SMART SM01154 46 385 2.2E-161 T 12-10-2018 IPR012548 Protein of unknown function DUF1704 M634_04510 0d1aff9db6ba8e4972c02db929f0b3db 385 Pfam PF08014 Domain of unknown function (DUF1704) 47 383 8.2E-118 T 12-10-2018 IPR012548 Protein of unknown function DUF1704 M634_04510 0d1aff9db6ba8e4972c02db929f0b3db 385 TIGRFAM TIGR02421 QEGLA: conserved hypothetical protein 21 378 2.0E-135 T 12-10-2018 IPR012656 Conserved hypothetical protein CHP02421, QEGLA M634_06420 d3ff33ce66aa80b0d4d3de3c34be98e6 241 SUPERFAMILY SSF51735 3 240 2.05E-75 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_06420 d3ff33ce66aa80b0d4d3de3c34be98e6 241 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 194 0.0012 T 12-10-2018 M634_06420 d3ff33ce66aa80b0d4d3de3c34be98e6 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.6E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_06420 d3ff33ce66aa80b0d4d3de3c34be98e6 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.6E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_06420 d3ff33ce66aa80b0d4d3de3c34be98e6 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.6E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_06420 d3ff33ce66aa80b0d4d3de3c34be98e6 241 TIGRFAM TIGR01831 fabG_rel: putative 3-oxoacyl-(acyl-carrier-protein) reductase 5 241 1.4E-126 T 12-10-2018 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 M634_06420 d3ff33ce66aa80b0d4d3de3c34be98e6 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.7E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_06420 d3ff33ce66aa80b0d4d3de3c34be98e6 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.7E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_06420 d3ff33ce66aa80b0d4d3de3c34be98e6 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 2.7E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_06420 d3ff33ce66aa80b0d4d3de3c34be98e6 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.7E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_06420 d3ff33ce66aa80b0d4d3de3c34be98e6 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.7E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_06420 d3ff33ce66aa80b0d4d3de3c34be98e6 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.7E-43 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_06420 d3ff33ce66aa80b0d4d3de3c34be98e6 241 Gene3D G3DSA:3.40.50.720 3 241 4.8E-75 T 12-10-2018 M634_06420 d3ff33ce66aa80b0d4d3de3c34be98e6 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 240 1.9E-58 T 12-10-2018 M634_16335 fb9cf1e864349398d8d67f5bec268a72 319 Pfam PF00753 Metallo-beta-lactamase superfamily 17 242 7.9E-34 T 12-10-2018 IPR001279 Metallo-beta-lactamase M634_16335 fb9cf1e864349398d8d67f5bec268a72 319 SMART SM00849 20 242 1.6E-18 T 12-10-2018 IPR001279 Metallo-beta-lactamase M634_16335 fb9cf1e864349398d8d67f5bec268a72 319 SUPERFAMILY SSF56281 3 319 1.89E-89 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M634_16335 fb9cf1e864349398d8d67f5bec268a72 319 Pfam PF14863 Alkyl sulfatase dimerisation 281 319 6.0E-10 T 12-10-2018 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 M634_16335 fb9cf1e864349398d8d67f5bec268a72 319 Gene3D G3DSA:1.25.40.880 278 319 4.7E-9 T 12-10-2018 IPR038536 Alkyl/aryl-sulfatase, dimerisation domain superfamily M634_16335 fb9cf1e864349398d8d67f5bec268a72 319 Gene3D G3DSA:3.60.15.30 1 277 5.3E-135 T 12-10-2018 M634_00425 cd246ae55cf2a94743c9343dbe60c782 70 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 25.6 T 12-10-2018 IPR010648 Uncharacterised protein family UPF0270 M634_00425 cd246ae55cf2a94743c9343dbe60c782 70 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 68 6.1E-34 T 12-10-2018 IPR010648 Uncharacterised protein family UPF0270 M634_00425 cd246ae55cf2a94743c9343dbe60c782 70 Gene3D G3DSA:1.10.10.610 1 70 1.8E-29 T 12-10-2018 IPR036685 YehU-like superfamily M634_00425 cd246ae55cf2a94743c9343dbe60c782 70 PIRSF PIRSF006169 1 70 7.1E-36 T 12-10-2018 IPR010648 Uncharacterised protein family UPF0270 M634_00425 cd246ae55cf2a94743c9343dbe60c782 70 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 53 5.0E-24 T 12-10-2018 IPR010648 Uncharacterised protein family UPF0270 M634_00425 cd246ae55cf2a94743c9343dbe60c782 70 SUPERFAMILY SSF118001 1 69 4.97E-28 T 12-10-2018 IPR036685 YehU-like superfamily M634_11280 b257426f7ead3b1ae05d5cb862094523 199 Pfam PF00293 NUDIX domain 43 161 1.3E-13 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 M634_11280 b257426f7ead3b1ae05d5cb862094523 199 SUPERFAMILY SSF55811 31 189 1.76E-33 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 M634_11280 b257426f7ead3b1ae05d5cb862094523 199 Gene3D G3DSA:3.90.79.10 20 195 7.0E-48 T 12-10-2018 M634_09775 2485c1bbf382c8b9b990caf532ce4351 202 Gene3D G3DSA:3.30.70.20 63 120 1.4E-33 T 12-10-2018 M634_09775 2485c1bbf382c8b9b990caf532ce4351 202 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M634_09775 2485c1bbf382c8b9b990caf532ce4351 202 SUPERFAMILY SSF54862 1 183 6.38E-48 T 12-10-2018 M634_09775 2485c1bbf382c8b9b990caf532ce4351 202 Gene3D G3DSA:3.30.70.20 5 181 1.4E-33 T 12-10-2018 M634_09775 2485c1bbf382c8b9b990caf532ce4351 202 Pfam PF13247 4Fe-4S dicluster domain 54 125 9.1E-10 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M634_19030 41b698b23fc8c982d5328a26c4b06cf4 418 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 241 399 4.5E-41 T 12-10-2018 IPR000160 GGDEF domain M634_19030 41b698b23fc8c982d5328a26c4b06cf4 418 SMART SM00267 231 400 2.4E-46 T 12-10-2018 IPR000160 GGDEF domain M634_19030 41b698b23fc8c982d5328a26c4b06cf4 418 Pfam PF00990 Diguanylate cyclase, GGDEF domain 242 396 6.5E-40 T 12-10-2018 IPR000160 GGDEF domain M634_19030 41b698b23fc8c982d5328a26c4b06cf4 418 Gene3D G3DSA:3.30.70.270 236 406 3.7E-45 T 12-10-2018 M634_19030 41b698b23fc8c982d5328a26c4b06cf4 418 SUPERFAMILY SSF55073 247 402 1.73E-39 T 12-10-2018 IPR029787 Nucleotide cyclase M634_17535 477165a20beee147742be379b1d9eea2 238 Gene3D G3DSA:3.40.30.10 68 238 9.6E-34 T 12-10-2018 M634_17535 477165a20beee147742be379b1d9eea2 238 SUPERFAMILY SSF52833 70 233 3.71E-31 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M634_17535 477165a20beee147742be379b1d9eea2 238 Pfam PF13462 Thioredoxin 77 234 3.0E-17 T 12-10-2018 IPR012336 Thioredoxin-like fold M634_17750 89e5f5f81a5f298ff55a312872ede800 712 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 68 712 4.0E-165 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 M634_17750 89e5f5f81a5f298ff55a312872ede800 712 SUPERFAMILY SSF56935 39 712 2.63E-124 T 12-10-2018 M634_17750 89e5f5f81a5f298ff55a312872ede800 712 Pfam PF00593 TonB dependent receptor 265 711 1.5E-47 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel M634_17750 89e5f5f81a5f298ff55a312872ede800 712 Gene3D G3DSA:2.40.170.20 192 712 2.8E-115 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily M634_17750 89e5f5f81a5f298ff55a312872ede800 712 Gene3D G3DSA:2.170.130.10 64 185 1.1E-29 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily M634_17750 89e5f5f81a5f298ff55a312872ede800 712 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 56 - T 12-10-2018 IPR010916 TonB box, conserved site M634_17750 89e5f5f81a5f298ff55a312872ede800 712 Pfam PF07715 TonB-dependent Receptor Plug Domain 66 177 2.6E-24 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain M634_03260 b6c4100ac8e9f651a3d01dd11455db2d 335 Gene3D G3DSA:3.40.50.2300 160 289 1.3E-80 T 12-10-2018 M634_03260 b6c4100ac8e9f651a3d01dd11455db2d 335 SMART SM00354 1 71 2.4E-31 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M634_03260 b6c4100ac8e9f651a3d01dd11455db2d 335 SUPERFAMILY SSF53822 60 332 4.71E-89 T 12-10-2018 IPR028082 Periplasmic binding protein-like I M634_03260 b6c4100ac8e9f651a3d01dd11455db2d 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 12-10-2018 M634_03260 b6c4100ac8e9f651a3d01dd11455db2d 335 Gene3D G3DSA:1.10.260.40 1 55 5.7E-26 T 12-10-2018 M634_03260 b6c4100ac8e9f651a3d01dd11455db2d 335 Pfam PF13377 Periplasmic binding protein-like domain 168 328 2.3E-40 T 12-10-2018 M634_03260 b6c4100ac8e9f651a3d01dd11455db2d 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 8.0E-20 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M634_03260 b6c4100ac8e9f651a3d01dd11455db2d 335 SUPERFAMILY SSF47413 1 59 3.47E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M634_03260 b6c4100ac8e9f651a3d01dd11455db2d 335 Gene3D G3DSA:3.40.50.2300 56 306 1.3E-80 T 12-10-2018 M634_21340 80a9e278b55f6503f8a45e70dda698a7 327 Gene3D G3DSA:3.40.50.1000 121 315 3.5E-38 T 12-10-2018 IPR023214 HAD superfamily M634_21340 80a9e278b55f6503f8a45e70dda698a7 327 Pfam PF12710 haloacid dehalogenase-like hydrolase 64 268 9.5E-16 T 12-10-2018 M634_21340 80a9e278b55f6503f8a45e70dda698a7 327 SUPERFAMILY SSF56784 62 308 3.68E-24 T 12-10-2018 IPR036412 HAD-like superfamily M634_07065 3109353adb177334ae28df691baef6cb 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 8 101 28.073 T 12-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS M634_07065 3109353adb177334ae28df691baef6cb 106 Gene3D G3DSA:3.30.1390.10 1 106 1.5E-46 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like M634_07065 3109353adb177334ae28df691baef6cb 106 SUPERFAMILY SSF54736 21 105 6.28E-33 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like M634_07065 3109353adb177334ae28df691baef6cb 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 24 102 2.3E-34 T 12-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 M634_18175 475dc384638777f88795a99d112c2053 303 Pfam PF03466 LysR substrate binding domain 91 297 4.3E-34 T 12-10-2018 IPR005119 LysR, substrate-binding M634_18175 475dc384638777f88795a99d112c2053 303 SUPERFAMILY SSF53850 91 299 8.84E-36 T 12-10-2018 M634_18175 475dc384638777f88795a99d112c2053 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 64 8.4E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_18175 475dc384638777f88795a99d112c2053 303 Gene3D G3DSA:3.40.190.290 92 298 2.0E-46 T 12-10-2018 M634_18175 475dc384638777f88795a99d112c2053 303 SUPERFAMILY SSF46785 10 112 2.73E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_18175 475dc384638777f88795a99d112c2053 303 Gene3D G3DSA:1.10.10.10 6 90 2.1E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_20915 7c46676989ffca0406a051c6beca6038 260 Gene3D G3DSA:1.10.12.10 201 260 2.1E-24 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal M634_20915 7c46676989ffca0406a051c6beca6038 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 258 1.6E-47 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 M634_20915 7c46676989ffca0406a051c6beca6038 260 SUPERFAMILY SSF52096 4 258 9.96E-72 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily M634_20915 7c46676989ffca0406a051c6beca6038 260 Gene3D G3DSA:3.90.226.10 2 198 1.4E-62 T 12-10-2018 M634_01975 73b3466414a1c1d4fae72d93040dbf16 312 Pfam PF01063 Amino-transferase class IV 36 268 3.7E-44 T 12-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 M634_01975 73b3466414a1c1d4fae72d93040dbf16 312 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 10 307 3.7E-142 T 12-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 M634_01975 73b3466414a1c1d4fae72d93040dbf16 312 SUPERFAMILY SSF56752 7 307 2.09E-102 T 12-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 M634_01975 73b3466414a1c1d4fae72d93040dbf16 312 Gene3D G3DSA:3.20.10.10 138 289 2.0E-106 T 12-10-2018 M634_01975 73b3466414a1c1d4fae72d93040dbf16 312 Gene3D G3DSA:3.30.470.10 10 127 2.0E-106 T 12-10-2018 M634_01975 73b3466414a1c1d4fae72d93040dbf16 312 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 223 - T 12-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 M634_06960 66e22db1286ef7809fa467c6d208931d 222 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 8 205 1.9E-7 T 12-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 M634_20955 af3a4fcc9294dc9df031fcfafb8fa20b 376 Pfam PF16113 Enoyl-CoA hydratase/isomerase 18 356 1.5E-106 T 12-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 M634_20955 af3a4fcc9294dc9df031fcfafb8fa20b 376 Gene3D G3DSA:3.90.226.10 4 371 3.1E-115 T 12-10-2018 M634_20955 af3a4fcc9294dc9df031fcfafb8fa20b 376 SUPERFAMILY SSF52096 18 339 1.04E-55 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily M634_12705 f2ec17442c762b2f51622e73c67ca2b6 192 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 26.24 T 12-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 M634_12705 f2ec17442c762b2f51622e73c67ca2b6 192 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 1.7E-89 T 12-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 M634_12705 f2ec17442c762b2f51622e73c67ca2b6 192 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 1.5E-61 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 M634_12705 f2ec17442c762b2f51622e73c67ca2b6 192 PIRSF PIRSF006102 1 192 1.0E-64 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 M634_23325 c7cdf12f2e5781b0f137212c2af4ce05 553 SUPERFAMILY SSF54862 454 553 1.38E-27 T 12-10-2018 M634_23325 c7cdf12f2e5781b0f137212c2af4ce05 553 Gene3D G3DSA:3.30.9.90 80 454 2.3E-184 T 12-10-2018 M634_23325 c7cdf12f2e5781b0f137212c2af4ce05 553 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 450 551 4.6E-47 T 12-10-2018 M634_23325 c7cdf12f2e5781b0f137212c2af4ce05 553 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 5.9E-6 T 12-10-2018 M634_23325 c7cdf12f2e5781b0f137212c2af4ce05 553 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 181 196 5.9E-6 T 12-10-2018 M634_23325 c7cdf12f2e5781b0f137212c2af4ce05 553 SUPERFAMILY SSF54373 213 310 3.1E-32 T 12-10-2018 M634_23325 c7cdf12f2e5781b0f137212c2af4ce05 553 Gene3D G3DSA:3.30.70.20 455 548 5.9E-35 T 12-10-2018 M634_23325 c7cdf12f2e5781b0f137212c2af4ce05 553 Pfam PF13450 NAD(P)-binding Rossmann-like domain 12 58 5.5E-7 T 12-10-2018 M634_23325 c7cdf12f2e5781b0f137212c2af4ce05 553 SUPERFAMILY SSF51905 3 452 1.44E-57 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_23325 c7cdf12f2e5781b0f137212c2af4ce05 553 Gene3D G3DSA:3.50.50.60 7 386 2.3E-184 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_09010 5858328d81d4022940a1614ac9b76274 632 Gene3D G3DSA:3.55.50.30 30 115 8.0E-30 T 12-10-2018 M634_09010 5858328d81d4022940a1614ac9b76274 632 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 514 533 5.8E-39 T 12-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 M634_09010 5858328d81d4022940a1614ac9b76274 632 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 422 437 5.8E-39 T 12-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 M634_09010 5858328d81d4022940a1614ac9b76274 632 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 388 407 5.8E-39 T 12-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 M634_09010 5858328d81d4022940a1614ac9b76274 632 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 204 221 5.8E-39 T 12-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 M634_09010 5858328d81d4022940a1614ac9b76274 632 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 304 324 5.8E-39 T 12-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 M634_09010 5858328d81d4022940a1614ac9b76274 632 Gene3D G3DSA:3.30.1370.120 116 184 2.2E-13 T 12-10-2018 IPR038591 NolW-like superfamily M634_09010 5858328d81d4022940a1614ac9b76274 632 Gene3D G3DSA:3.30.1370.120 191 301 5.2E-9 T 12-10-2018 IPR038591 NolW-like superfamily M634_09010 5858328d81d4022940a1614ac9b76274 632 TIGRFAM TIGR02516 type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family 44 536 8.2E-150 T 12-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 M634_09010 5858328d81d4022940a1614ac9b76274 632 Pfam PF00263 Bacterial type II and III secretion system protein 375 535 2.6E-36 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 M634_09010 5858328d81d4022940a1614ac9b76274 632 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 481 514 - T 12-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 M634_09010 5858328d81d4022940a1614ac9b76274 632 Pfam PF03958 Bacterial type II/III secretion system short domain 192 301 4.3E-15 T 12-10-2018 IPR005644 NolW-like M634_00540 061756d7a301e93c1e40fa5ac52e9000 310 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 8 301 30.263 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 M634_00540 061756d7a301e93c1e40fa5ac52e9000 310 Gene3D G3DSA:3.40.50.300 12 292 9.1E-109 T 12-10-2018 M634_00540 061756d7a301e93c1e40fa5ac52e9000 310 SUPERFAMILY SSF52540 10 153 1.13E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_00540 061756d7a301e93c1e40fa5ac52e9000 310 Gene3D G3DSA:1.10.20.140 115 186 9.1E-109 T 12-10-2018 M634_00540 061756d7a301e93c1e40fa5ac52e9000 310 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 9 294 4.2E-116 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 M634_00540 061756d7a301e93c1e40fa5ac52e9000 310 Pfam PF01715 IPP transferase 42 287 2.4E-86 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 M634_20400 159d57d5a99cb29584e59e606a5a1323 477 Gene3D G3DSA:3.40.50.720 129 462 8.3E-114 T 12-10-2018 M634_20400 159d57d5a99cb29584e59e606a5a1323 477 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 129 462 5.6E-113 T 12-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_20400 159d57d5a99cb29584e59e606a5a1323 477 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 293 450 4.3E-44 T 12-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_20400 159d57d5a99cb29584e59e606a5a1323 477 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 128 238 2.0E-21 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_20400 159d57d5a99cb29584e59e606a5a1323 477 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 286 293 - T 12-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_20400 159d57d5a99cb29584e59e606a5a1323 477 SUPERFAMILY SSF51735 128 304 1.83E-44 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_20400 159d57d5a99cb29584e59e606a5a1323 477 Gene3D G3DSA:3.30.360.10 287 452 8.3E-114 T 12-10-2018 M634_20400 159d57d5a99cb29584e59e606a5a1323 477 SMART SM00846 127 288 1.1E-51 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_20400 159d57d5a99cb29584e59e606a5a1323 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 282 300 2.0E-17 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_20400 159d57d5a99cb29584e59e606a5a1323 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 246 259 2.0E-17 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_20400 159d57d5a99cb29584e59e606a5a1323 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 309 325 2.0E-17 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_20400 159d57d5a99cb29584e59e606a5a1323 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 365 382 2.0E-17 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 M634_20400 159d57d5a99cb29584e59e606a5a1323 477 SUPERFAMILY SSF55347 288 451 2.84E-52 T 12-10-2018 M634_12225 fea35105cb010c7b7bb0b8743d1c556e 171 ProSitePatterns PS00194 Thioredoxin family active site. 69 87 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 M634_12225 fea35105cb010c7b7bb0b8743d1c556e 171 Pfam PF00085 Thioredoxin 52 157 8.4E-12 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 M634_12225 fea35105cb010c7b7bb0b8743d1c556e 171 SUPERFAMILY SSF52833 41 161 1.82E-24 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M634_12225 fea35105cb010c7b7bb0b8743d1c556e 171 Gene3D G3DSA:3.40.30.10 31 167 1.5E-19 T 12-10-2018 M634_03770 ff5cc1446c6705f06e0c03dbbc5490da 146 Pfam PF11777 Protein of unknown function (DUF3316) 26 139 3.9E-19 T 12-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 M634_03770 ff5cc1446c6705f06e0c03dbbc5490da 146 PIRSF PIRSF028299 24 146 1.7E-28 T 12-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 M634_15500 54ffeb96ea71cf2633b3e17fe9d0a9f1 272 PIRSF PIRSF000193 3 270 4.1E-75 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 M634_15500 54ffeb96ea71cf2633b3e17fe9d0a9f1 272 Gene3D G3DSA:1.10.3730.10 165 272 2.0E-34 T 12-10-2018 M634_15500 54ffeb96ea71cf2633b3e17fe9d0a9f1 272 SUPERFAMILY SSF48179 163 270 3.4E-30 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 M634_15500 54ffeb96ea71cf2633b3e17fe9d0a9f1 272 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 5 99 9.6E-26 T 12-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal M634_15500 54ffeb96ea71cf2633b3e17fe9d0a9f1 272 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 224 246 - T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 M634_15500 54ffeb96ea71cf2633b3e17fe9d0a9f1 272 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 268 2.9E-73 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 M634_15500 54ffeb96ea71cf2633b3e17fe9d0a9f1 272 SUPERFAMILY SSF51735 4 160 7.9E-38 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_15500 54ffeb96ea71cf2633b3e17fe9d0a9f1 272 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 268 25.24 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 M634_15500 54ffeb96ea71cf2633b3e17fe9d0a9f1 272 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 268 6.0E-30 T 12-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 M634_15500 54ffeb96ea71cf2633b3e17fe9d0a9f1 272 Gene3D G3DSA:3.40.50.720 2 164 1.3E-50 T 12-10-2018 M634_02445 5d83ab9a38b354c20f304cec3ff22458 170 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 45 154 7.0E-8 T 12-10-2018 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III M634_14535 fe2f38b198042d9f57e486faa01d9a5a 201 Pfam PF10144 Bacterial virulence factor haemolysin 12 151 7.3E-38 T 12-10-2018 IPR019305 Uncharacterised protein family Smp M634_22200 fa25b114eca4660c2b710e6ef4dd2138 179 Pfam PF01292 Prokaryotic cytochrome b561 8 176 3.5E-30 T 12-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 M634_22200 fa25b114eca4660c2b710e6ef4dd2138 179 SUPERFAMILY SSF81342 4 175 2.04E-35 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 M634_22200 fa25b114eca4660c2b710e6ef4dd2138 179 Gene3D G3DSA:1.20.950.20 2 83 9.1E-7 T 12-10-2018 M634_13800 583f15fb8123d3b3943783e8bc8d0788 147 Pfam PF09842 Predicted membrane protein (DUF2069) 21 123 8.2E-34 T 12-10-2018 IPR018643 Protein of unknown function DUF2069, membrane M634_19055 7abbc7974d9aca16bf6f9b6fe262b1c3 408 Gene3D G3DSA:3.50.50.60 6 393 1.8E-81 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_19055 7abbc7974d9aca16bf6f9b6fe262b1c3 408 Gene3D G3DSA:3.30.9.10 89 359 1.8E-81 T 12-10-2018 M634_19055 7abbc7974d9aca16bf6f9b6fe262b1c3 408 Pfam PF01266 FAD dependent oxidoreductase 6 397 1.8E-65 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 M634_19055 7abbc7974d9aca16bf6f9b6fe262b1c3 408 SUPERFAMILY SSF51905 5 301 1.04E-44 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_09965 e9a25c85e08c41e72fdaa187e7c16ee5 300 PRINTS PR01021 OMPA domain signature 212 228 5.4E-9 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M634_09965 e9a25c85e08c41e72fdaa187e7c16ee5 300 PRINTS PR01021 OMPA domain signature 197 212 5.4E-9 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M634_09965 e9a25c85e08c41e72fdaa187e7c16ee5 300 PRINTS PR01021 OMPA domain signature 167 189 5.4E-9 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M634_09965 e9a25c85e08c41e72fdaa187e7c16ee5 300 Pfam PF00691 OmpA family 167 261 7.1E-20 T 12-10-2018 IPR006665 OmpA-like domain M634_09965 e9a25c85e08c41e72fdaa187e7c16ee5 300 Gene3D G3DSA:3.30.1330.60 145 276 2.8E-27 T 12-10-2018 IPR036737 OmpA-like domain superfamily M634_09965 e9a25c85e08c41e72fdaa187e7c16ee5 300 SUPERFAMILY SSF103088 156 267 4.71E-29 T 12-10-2018 IPR036737 OmpA-like domain superfamily M634_03755 e2e5f686d5281c6f86ca951b78e4cc8e 470 SUPERFAMILY SSF50800 70 167 2.97E-29 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily M634_03755 e2e5f686d5281c6f86ca951b78e4cc8e 470 Gene3D G3DSA:3.40.1380.20 336 467 2.6E-41 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M634_03755 e2e5f686d5281c6f86ca951b78e4cc8e 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 12-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M634_03755 e2e5f686d5281c6f86ca951b78e4cc8e 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 340 1.6E-155 T 12-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M634_03755 e2e5f686d5281c6f86ca951b78e4cc8e 470 Gene3D G3DSA:2.40.33.10 71 167 1.8E-148 T 12-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M634_03755 e2e5f686d5281c6f86ca951b78e4cc8e 470 SUPERFAMILY SSF51621 1 339 4.19E-103 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 M634_03755 e2e5f686d5281c6f86ca951b78e4cc8e 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 5.7E-28 T 12-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M634_03755 e2e5f686d5281c6f86ca951b78e4cc8e 470 Gene3D G3DSA:3.20.20.60 4 332 1.8E-148 T 12-10-2018 M634_03755 e2e5f686d5281c6f86ca951b78e4cc8e 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 1.5E-79 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M634_03755 e2e5f686d5281c6f86ca951b78e4cc8e 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 1.5E-79 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M634_03755 e2e5f686d5281c6f86ca951b78e4cc8e 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 1.5E-79 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M634_03755 e2e5f686d5281c6f86ca951b78e4cc8e 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 1.5E-79 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M634_03755 e2e5f686d5281c6f86ca951b78e4cc8e 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 1.5E-79 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M634_03755 e2e5f686d5281c6f86ca951b78e4cc8e 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 1.5E-79 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M634_03755 e2e5f686d5281c6f86ca951b78e4cc8e 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 1.5E-79 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M634_03755 e2e5f686d5281c6f86ca951b78e4cc8e 470 SUPERFAMILY SSF52935 323 469 2.88E-34 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M634_03755 e2e5f686d5281c6f86ca951b78e4cc8e 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 2.5E-188 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 M634_07650 d757b5088aac2b5bba95d9777393dab3 404 Pfam PF08668 HDOD domain 205 325 4.5E-13 T 12-10-2018 IPR013976 Metal-dependent hydrolase HDOD M634_07650 d757b5088aac2b5bba95d9777393dab3 404 PIRSF PIRSF003180 1 403 3.1E-171 T 12-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing M634_07650 d757b5088aac2b5bba95d9777393dab3 404 Gene3D G3DSA:1.10.3210.10 195 402 1.3E-21 T 12-10-2018 M634_07650 d757b5088aac2b5bba95d9777393dab3 404 Gene3D G3DSA:3.20.20.450 3 194 1.2E-18 T 12-10-2018 IPR035919 EAL domain superfamily M634_07650 d757b5088aac2b5bba95d9777393dab3 404 SUPERFAMILY SSF109604 181 400 2.04E-43 T 12-10-2018 M634_07650 d757b5088aac2b5bba95d9777393dab3 404 SUPERFAMILY SSF141868 5 193 7.06E-29 T 12-10-2018 IPR035919 EAL domain superfamily M634_07650 d757b5088aac2b5bba95d9777393dab3 404 SMART SM00052 2 195 7.3E-4 T 12-10-2018 IPR001633 EAL domain M634_07650 d757b5088aac2b5bba95d9777393dab3 404 Pfam PF00563 EAL domain 64 190 7.1E-16 T 12-10-2018 IPR001633 EAL domain M634_13035 79a332d3a25db61f10242344e7b3995a 231 SUPERFAMILY SSF69349 104 190 7.85E-6 T 12-10-2018 M634_13035 79a332d3a25db61f10242344e7b3995a 231 SUPERFAMILY SSF69255 21 112 2.38E-10 T 12-10-2018 M634_18100 2ea82298466b22b70cb74a37a85708b5 408 SUPERFAMILY SSF52172 5 186 6.4E-39 T 12-10-2018 IPR011006 CheY-like superfamily M634_18100 2ea82298466b22b70cb74a37a85708b5 408 SUPERFAMILY SSF52540 144 334 6.01E-14 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_18100 2ea82298466b22b70cb74a37a85708b5 408 Gene3D G3DSA:3.40.50.300 143 275 9.8E-8 T 12-10-2018 M634_18100 2ea82298466b22b70cb74a37a85708b5 408 Gene3D G3DSA:1.10.10.60 345 403 7.5E-8 T 12-10-2018 M634_18100 2ea82298466b22b70cb74a37a85708b5 408 Gene3D G3DSA:1.10.8.60 277 344 2.5E-10 T 12-10-2018 M634_18100 2ea82298466b22b70cb74a37a85708b5 408 Gene3D G3DSA:3.40.50.2300 2 136 9.3E-35 T 12-10-2018 M634_18100 2ea82298466b22b70cb74a37a85708b5 408 Pfam PF02954 Bacterial regulatory protein, Fis family 360 398 1.5E-6 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M634_18100 2ea82298466b22b70cb74a37a85708b5 408 Pfam PF00072 Response regulator receiver domain 5 114 1.8E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_18100 2ea82298466b22b70cb74a37a85708b5 408 SUPERFAMILY SSF46689 350 401 4.39E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_18100 2ea82298466b22b70cb74a37a85708b5 408 SMART SM00448 3 114 4.5E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_11580 c39b7ecae263dad6cfe75a5a90109df6 152 Gene3D G3DSA:3.30.40.190 3 116 2.1E-5 T 12-10-2018 IPR038439 Ref-like superfamily M634_11580 c39b7ecae263dad6cfe75a5a90109df6 152 Pfam PF16786 Recombination enhancement, RecA-dependent nuclease 9 111 4.4E-8 T 12-10-2018 IPR031875 Recombination enhancement, RecA-dependent nuclease M634_09335 66362b991488fac257a7cc095e1fa296 109 Pfam PF04358 DsrC like protein 4 109 1.3E-43 T 12-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE M634_09335 66362b991488fac257a7cc095e1fa296 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 4 109 3.6E-49 T 12-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE M634_09335 66362b991488fac257a7cc095e1fa296 109 Gene3D G3DSA:1.10.10.370 39 109 9.9E-31 T 12-10-2018 M634_09335 66362b991488fac257a7cc095e1fa296 109 SUPERFAMILY SSF69721 2 109 6.67E-41 T 12-10-2018 IPR025526 DsrC-like domain superfamily M634_09335 66362b991488fac257a7cc095e1fa296 109 Gene3D G3DSA:3.30.1420.10 2 38 6.8E-12 T 12-10-2018 M634_09335 66362b991488fac257a7cc095e1fa296 109 PIRSF PIRSF006223 2 109 6.8E-41 T 12-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE M634_16055 d10f555b0538fcd685fe1a804d2ecac7 547 Gene3D G3DSA:3.55.50.30 50 146 1.1E-10 T 12-10-2018 M634_16055 d10f555b0538fcd685fe1a804d2ecac7 547 Pfam PF07655 Secretin N-terminal domain 145 243 4.1E-25 T 12-10-2018 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 M634_16055 d10f555b0538fcd685fe1a804d2ecac7 547 Pfam PF00263 Bacterial type II and III secretion system protein 346 523 8.2E-41 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 M634_16055 d10f555b0538fcd685fe1a804d2ecac7 547 PRINTS PR00811 Bacterial general secretion pathway protein D signature 511 525 6.8E-19 T 12-10-2018 IPR001775 GspD/PilQ family M634_16055 d10f555b0538fcd685fe1a804d2ecac7 547 PRINTS PR00811 Bacterial general secretion pathway protein D signature 488 506 6.8E-19 T 12-10-2018 IPR001775 GspD/PilQ family M634_16055 d10f555b0538fcd685fe1a804d2ecac7 547 PRINTS PR00811 Bacterial general secretion pathway protein D signature 272 282 6.8E-19 T 12-10-2018 IPR001775 GspD/PilQ family M634_16055 d10f555b0538fcd685fe1a804d2ecac7 547 PRINTS PR00811 Bacterial general secretion pathway protein D signature 341 365 6.8E-19 T 12-10-2018 IPR001775 GspD/PilQ family M634_16055 d10f555b0538fcd685fe1a804d2ecac7 547 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 238 523 1.3E-91 T 12-10-2018 IPR013358 Pilus biogenesis, MshL M634_16055 d10f555b0538fcd685fe1a804d2ecac7 547 SMART SM00965 93 141 8.4E-6 T 12-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 M634_19820 5835993583b81838874fddc502681c7b 131 Pfam PF09622 Putative integral membrane protein (DUF2391) 14 125 1.2E-11 T 12-10-2018 IPR024464 Protein of unknown function DUF2391 M634_16720 65223bf237c7d86e9012626fc4bae59c 638 SUPERFAMILY SSF58104 329 638 5.62E-79 T 12-10-2018 M634_16720 65223bf237c7d86e9012626fc4bae59c 638 Gene3D G3DSA:3.30.450.20 162 283 2.1E-17 T 12-10-2018 M634_16720 65223bf237c7d86e9012626fc4bae59c 638 Gene3D G3DSA:1.10.287.950 306 638 2.7E-77 T 12-10-2018 M634_16720 65223bf237c7d86e9012626fc4bae59c 638 SMART SM00304 307 361 1.1E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_16720 65223bf237c7d86e9012626fc4bae59c 638 Pfam PF00672 HAMP domain 308 357 1.6E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_16720 65223bf237c7d86e9012626fc4bae59c 638 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 422 604 4.8E-42 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_16720 65223bf237c7d86e9012626fc4bae59c 638 SMART SM00283 376 637 1.6E-84 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_22895 4a93ad71fd311c35d8ff90e65f15fe34 262 Gene3D G3DSA:3.40.50.1820 7 235 2.3E-31 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_22895 4a93ad71fd311c35d8ff90e65f15fe34 262 Pfam PF01764 Lipase (class 3) 60 204 4.5E-27 T 12-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 M634_22895 4a93ad71fd311c35d8ff90e65f15fe34 262 SUPERFAMILY SSF53474 9 247 1.55E-35 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_19530 ffe3289e0a4727fac38f52c0fd56c754 457 PRINTS PR01005 Flagellar hook-associated protein signature 122 142 9.2E-10 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 M634_19530 ffe3289e0a4727fac38f52c0fd56c754 457 PRINTS PR01005 Flagellar hook-associated protein signature 10 33 9.2E-10 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 M634_19530 ffe3289e0a4727fac38f52c0fd56c754 457 PRINTS PR01005 Flagellar hook-associated protein signature 213 231 9.2E-10 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 M634_19530 ffe3289e0a4727fac38f52c0fd56c754 457 PRINTS PR01005 Flagellar hook-associated protein signature 155 179 9.2E-10 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 M634_19530 ffe3289e0a4727fac38f52c0fd56c754 457 PRINTS PR01005 Flagellar hook-associated protein signature 48 70 9.2E-10 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 M634_19530 ffe3289e0a4727fac38f52c0fd56c754 457 Pfam PF00460 Flagella basal body rod protein 5 33 1.0E-8 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 M634_19530 ffe3289e0a4727fac38f52c0fd56c754 457 SUPERFAMILY SSF64518 133 457 4.18E-24 T 12-10-2018 M634_19530 ffe3289e0a4727fac38f52c0fd56c754 457 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 402 456 3.9E-7 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain M634_19530 ffe3289e0a4727fac38f52c0fd56c754 457 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 2 456 1.9E-126 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 M634_04880 a2db7c719c92a21cc79a780a133f6094 127 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 2.1E-69 T 12-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 M634_04880 a2db7c719c92a21cc79a780a133f6094 127 Gene3D G3DSA:3.90.1010.10 1 127 5.3E-59 T 12-10-2018 M634_04880 a2db7c719c92a21cc79a780a133f6094 127 Pfam PF01592 NifU-like N terminal domain 2 126 1.4E-56 T 12-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 M634_04880 a2db7c719c92a21cc79a780a133f6094 127 SUPERFAMILY SSF82649 1 125 4.97E-48 T 12-10-2018 M634_22835 03f67e18cb6b29fda901900c1925bd0f 107 SUPERFAMILY SSF50022 1 106 5.84E-34 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 M634_22835 03f67e18cb6b29fda901900c1925bd0f 107 Gene3D G3DSA:2.102.10.10 1 107 4.2E-32 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 M634_22835 03f67e18cb6b29fda901900c1925bd0f 107 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 106 3.5E-39 T 12-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 M634_22835 03f67e18cb6b29fda901900c1925bd0f 107 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 4 106 8.4E-34 T 12-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 M634_07375 70dbf36f2224e184d96963bececded91 379 Gene3D G3DSA:1.10.287.470 98 171 3.2E-108 T 12-10-2018 M634_07375 70dbf36f2224e184d96963bececded91 379 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 373 2.6E-84 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 M634_07375 70dbf36f2224e184d96963bececded91 379 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 291 1.2E-17 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M634_07375 70dbf36f2224e184d96963bececded91 379 Gene3D G3DSA:2.40.50.100 63 207 3.2E-108 T 12-10-2018 M634_07375 70dbf36f2224e184d96963bececded91 379 Gene3D G3DSA:2.40.30.170 51 301 3.2E-108 T 12-10-2018 M634_07375 70dbf36f2224e184d96963bececded91 379 SUPERFAMILY SSF111369 51 297 3.4E-81 T 12-10-2018 M634_07375 70dbf36f2224e184d96963bececded91 379 Gene3D G3DSA:2.40.420.20 302 371 3.2E-108 T 12-10-2018 M634_17680 f762ad2b9ec830f5365cf41525372e3d 276 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 67 198 7.5E-33 T 12-10-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 M634_24475 aaecd37f04a6753ca28a015535ed434f 707 Gene3D G3DSA:3.90.70.10 8 137 7.3E-30 T 12-10-2018 M634_24475 aaecd37f04a6753ca28a015535ed434f 707 Gene3D G3DSA:3.40.50.300 463 707 1.4E-92 T 12-10-2018 M634_24475 aaecd37f04a6753ca28a015535ed434f 707 Pfam PF00664 ABC transporter transmembrane region 157 424 1.8E-60 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 M634_24475 aaecd37f04a6753ca28a015535ed434f 707 Gene3D G3DSA:1.20.1560.10 141 454 9.2E-75 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M634_24475 aaecd37f04a6753ca28a015535ed434f 707 SUPERFAMILY SSF90123 142 453 4.05E-67 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 M634_24475 aaecd37f04a6753ca28a015535ed434f 707 ProSitePatterns PS00211 ABC transporters family signature. 606 620 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_24475 aaecd37f04a6753ca28a015535ed434f 707 SUPERFAMILY SSF52540 458 705 1.63E-89 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_24475 aaecd37f04a6753ca28a015535ed434f 707 Pfam PF03412 Peptidase C39 family 5 129 1.6E-27 T 12-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 M634_24475 aaecd37f04a6753ca28a015535ed434f 707 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 10 707 0.0 T 12-10-2018 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 M634_24475 aaecd37f04a6753ca28a015535ed434f 707 SMART SM00382 494 680 2.8E-20 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_24475 aaecd37f04a6753ca28a015535ed434f 707 Pfam PF00005 ABC transporter 485 634 1.4E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_15795 bc726e283dda04b14567b526bff27707 407 Gene3D G3DSA:3.75.10.10 6 404 2.0E-146 T 12-10-2018 M634_15795 bc726e283dda04b14567b526bff27707 407 Hamap MF_00242 Arginine deiminase [arcA]. 1 407 45.023 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 M634_15795 bc726e283dda04b14567b526bff27707 407 PIRSF PIRSF006356 1 407 6.1E-156 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 M634_15795 bc726e283dda04b14567b526bff27707 407 Gene3D G3DSA:1.10.3930.10 68 148 2.0E-146 T 12-10-2018 M634_15795 bc726e283dda04b14567b526bff27707 407 Pfam PF02274 Amidinotransferase 18 404 3.4E-110 T 12-10-2018 M634_15795 bc726e283dda04b14567b526bff27707 407 TIGRFAM TIGR01078 arcA: arginine deiminase 4 407 3.2E-173 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 M634_15795 bc726e283dda04b14567b526bff27707 407 PRINTS PR01466 Bacterial arginine deiminase signature 363 377 2.9E-44 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 M634_15795 bc726e283dda04b14567b526bff27707 407 PRINTS PR01466 Bacterial arginine deiminase signature 343 360 2.9E-44 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 M634_15795 bc726e283dda04b14567b526bff27707 407 PRINTS PR01466 Bacterial arginine deiminase signature 177 192 2.9E-44 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 M634_15795 bc726e283dda04b14567b526bff27707 407 PRINTS PR01466 Bacterial arginine deiminase signature 386 404 2.9E-44 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 M634_15795 bc726e283dda04b14567b526bff27707 407 PRINTS PR01466 Bacterial arginine deiminase signature 2 22 2.9E-44 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 M634_15795 bc726e283dda04b14567b526bff27707 407 PRINTS PR01466 Bacterial arginine deiminase signature 149 167 2.9E-44 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 M634_15795 bc726e283dda04b14567b526bff27707 407 SUPERFAMILY SSF55909 3 407 3.93E-129 T 12-10-2018 M634_06825 7778061913a0294588af0c7f9e97074d 252 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 5 251 7.8E-110 T 12-10-2018 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|MetaCyc: PWY-5532 M634_06825 7778061913a0294588af0c7f9e97074d 252 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 65 80 - T 12-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 M634_06825 7778061913a0294588af0c7f9e97074d 252 Gene3D G3DSA:3.40.50.1580 1 252 1.6E-81 T 12-10-2018 M634_06825 7778061913a0294588af0c7f9e97074d 252 Pfam PF01048 Phosphorylase superfamily 20 246 4.2E-40 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 M634_06825 7778061913a0294588af0c7f9e97074d 252 SUPERFAMILY SSF53167 4 251 1.7E-72 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 M634_18620 8a42a857a547af5a8d8b6212508c305d 615 SUPERFAMILY SSF55486 3 550 4.64E-76 T 12-10-2018 M634_18620 8a42a857a547af5a8d8b6212508c305d 615 Pfam PF01432 Peptidase family M3 145 231 3.0E-4 T 12-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 M634_18620 8a42a857a547af5a8d8b6212508c305d 615 Pfam PF01432 Peptidase family M3 285 490 9.0E-16 T 12-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 M634_18620 8a42a857a547af5a8d8b6212508c305d 615 Gene3D G3DSA:3.40.390.10 281 380 1.2E-17 T 12-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 M634_18620 8a42a857a547af5a8d8b6212508c305d 615 Gene3D G3DSA:1.10.1370.10 82 243 7.4E-9 T 12-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 M634_18620 8a42a857a547af5a8d8b6212508c305d 615 Gene3D G3DSA:1.10.1370.10 381 536 1.2E-17 T 12-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 M634_09780 d7fcd63172170cdb44ade71cbc28f5a9 951 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 62 112 1.7E-11 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M634_09780 d7fcd63172170cdb44ade71cbc28f5a9 951 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 19 43 5.5E-4 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal M634_09780 d7fcd63172170cdb44ade71cbc28f5a9 951 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 66 83 - T 12-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 M634_09780 d7fcd63172170cdb44ade71cbc28f5a9 951 Gene3D G3DSA:3.40.50.740 126 617 1.0E-133 T 12-10-2018 M634_09780 d7fcd63172170cdb44ade71cbc28f5a9 951 SUPERFAMILY SSF50692 752 951 4.35E-38 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily M634_09780 d7fcd63172170cdb44ade71cbc28f5a9 951 Gene3D G3DSA:2.40.40.20 767 951 2.4E-47 T 12-10-2018 M634_09780 d7fcd63172170cdb44ade71cbc28f5a9 951 Gene3D G3DSA:2.20.25.90 62 114 3.1E-12 T 12-10-2018 M634_09780 d7fcd63172170cdb44ade71cbc28f5a9 951 Gene3D G3DSA:3.40.228.10 195 394 1.0E-133 T 12-10-2018 M634_09780 d7fcd63172170cdb44ade71cbc28f5a9 951 Pfam PF01568 Molydopterin dinucleotide binding domain 818 944 3.7E-20 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 M634_09780 d7fcd63172170cdb44ade71cbc28f5a9 951 SMART SM00926 61 115 3.9E-16 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M634_09780 d7fcd63172170cdb44ade71cbc28f5a9 951 SUPERFAMILY SSF53706 60 646 2.09E-201 T 12-10-2018 M634_09780 d7fcd63172170cdb44ade71cbc28f5a9 951 PIRSF PIRSF036643 641 678 370.0 T 12-10-2018 M634_09780 d7fcd63172170cdb44ade71cbc28f5a9 951 PIRSF PIRSF036643 11 580 4.8E-115 T 12-10-2018 M634_09780 d7fcd63172170cdb44ade71cbc28f5a9 951 PIRSF PIRSF036643 780 950 7.8E-16 T 12-10-2018 M634_09780 d7fcd63172170cdb44ade71cbc28f5a9 951 Pfam PF00384 Molybdopterin oxidoreductase 118 569 1.3E-55 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M634_16960 59519cd83dfa9f8e8a2b32fb5cca2642 115 SUPERFAMILY SSF47413 8 87 9.29E-18 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M634_16960 59519cd83dfa9f8e8a2b32fb5cca2642 115 Gene3D G3DSA:1.10.260.40 3 89 1.1E-9 T 12-10-2018 M634_16960 59519cd83dfa9f8e8a2b32fb5cca2642 115 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 20 70 4.1E-5 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 M634_02330 3440538f7c593c8abc59083679965176 203 Pfam PF01081 KDPG and KHG aldolase 5 197 4.9E-73 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 M634_02330 3440538f7c593c8abc59083679965176 203 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 5 202 5.5E-83 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 M634_02330 3440538f7c593c8abc59083679965176 203 Gene3D G3DSA:3.20.20.70 1 203 7.4E-74 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_02330 3440538f7c593c8abc59083679965176 203 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 12-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 M634_02330 3440538f7c593c8abc59083679965176 203 SUPERFAMILY SSF51569 3 201 1.06E-66 T 12-10-2018 M634_02330 3440538f7c593c8abc59083679965176 203 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 12-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 M634_12750 9b90350baf558c73c6b513e0203ca427 772 SUPERFAMILY SSF56349 501 572 1.97E-6 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 M634_09685 92b7a9135313fb2bbde4e6c704c80539 226 SUPERFAMILY SSF53098 66 221 7.28E-39 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M634_09685 92b7a9135313fb2bbde4e6c704c80539 226 Gene3D G3DSA:3.30.420.10 65 225 8.2E-17 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M634_09685 92b7a9135313fb2bbde4e6c704c80539 226 Pfam PF00665 Integrase core domain 68 182 6.0E-28 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M634_15220 7d6a4fd3bf5dc63290aacd9451a0abeb 234 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 10 229 3.5E-78 T 12-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 M634_15220 7d6a4fd3bf5dc63290aacd9451a0abeb 234 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 9 230 1.4E-77 T 12-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 M634_15220 7d6a4fd3bf5dc63290aacd9451a0abeb 234 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 7 229 43.587 T 12-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 M634_15220 7d6a4fd3bf5dc63290aacd9451a0abeb 234 Gene3D G3DSA:3.90.550.10 3 233 1.2E-76 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M634_15220 7d6a4fd3bf5dc63290aacd9451a0abeb 234 SUPERFAMILY SSF53448 9 230 2.41E-63 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M634_15220 7d6a4fd3bf5dc63290aacd9451a0abeb 234 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 105 112 - T 12-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 M634_16525 20d13cfa9b5764c5da6adc87e9b66e2c 277 SUPERFAMILY SSF52540 18 245 2.9E-8 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_16525 20d13cfa9b5764c5da6adc87e9b66e2c 277 Pfam PF10364 Putative capsular polysaccharide synthesis protein 121 257 2.4E-61 T 12-10-2018 IPR018831 Uncharacterised protein family NKWYS M634_09445 ae78a60276a32f390df78617ede1f335 1613 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 76 1602 0.0 T 12-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 M634_09445 ae78a60276a32f390df78617ede1f335 1613 PIRSF PIRSF036761 1 1610 0.0 T 12-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 M634_09445 ae78a60276a32f390df78617ede1f335 1613 SUPERFAMILY SSF53223 754 940 5.85E-25 T 12-10-2018 M634_09445 ae78a60276a32f390df78617ede1f335 1613 SUPERFAMILY SSF51735 945 1281 4.53E-28 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_22095 1481fd34657544c2993093a8c1076a78 432 Pfam PF13343 Bacterial extracellular solute-binding protein 83 291 9.5E-21 T 12-10-2018 M634_22095 1481fd34657544c2993093a8c1076a78 432 SUPERFAMILY SSF53850 32 296 3.12E-39 T 12-10-2018 M634_22095 1481fd34657544c2993093a8c1076a78 432 Gene3D G3DSA:3.40.190.10 37 300 5.1E-32 T 12-10-2018 M634_22095 1481fd34657544c2993093a8c1076a78 432 Gene3D G3DSA:3.40.190.10 135 251 5.1E-32 T 12-10-2018 M634_13155 778e8645a77fefb1270590d3c6b8b23d 341 PIRSF PIRSF018494 1 340 6.0E-133 T 12-10-2018 IPR030935 Phage portal protein PBSX family, Proteobacteria M634_13155 778e8645a77fefb1270590d3c6b8b23d 341 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 49 326 2.0E-65 T 12-10-2018 IPR006430 Phage portal protein PBSX family M634_12055 bacaa74d1a0a3555f45ec821674186c3 850 SMART SM00388 461 530 3.7E-6 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_12055 bacaa74d1a0a3555f45ec821674186c3 850 SUPERFAMILY SSF52172 720 835 2.13E-30 T 12-10-2018 IPR011006 CheY-like superfamily M634_12055 bacaa74d1a0a3555f45ec821674186c3 850 SUPERFAMILY SSF47384 455 521 1.63E-6 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M634_12055 bacaa74d1a0a3555f45ec821674186c3 850 SUPERFAMILY SSF55874 535 682 4.45E-26 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_12055 bacaa74d1a0a3555f45ec821674186c3 850 Pfam PF00512 His Kinase A (phospho-acceptor) domain 464 526 2.5E-7 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_12055 bacaa74d1a0a3555f45ec821674186c3 850 SMART SM00448 720 830 3.2E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_12055 bacaa74d1a0a3555f45ec821674186c3 850 Gene3D G3DSA:3.30.565.10 535 686 6.6E-25 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_12055 bacaa74d1a0a3555f45ec821674186c3 850 Pfam PF00072 Response regulator receiver domain 722 829 7.2E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_12055 bacaa74d1a0a3555f45ec821674186c3 850 SMART SM00387 574 683 3.1E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_12055 bacaa74d1a0a3555f45ec821674186c3 850 PRINTS PR00344 Bacterial sensor protein C-terminal signature 613 627 1.1E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_12055 bacaa74d1a0a3555f45ec821674186c3 850 PRINTS PR00344 Bacterial sensor protein C-terminal signature 643 661 1.1E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_12055 bacaa74d1a0a3555f45ec821674186c3 850 PRINTS PR00344 Bacterial sensor protein C-terminal signature 631 641 1.1E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 M634_12055 bacaa74d1a0a3555f45ec821674186c3 850 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 581 680 1.5E-12 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_12055 bacaa74d1a0a3555f45ec821674186c3 850 Gene3D G3DSA:1.10.287.130 424 525 4.0E-6 T 12-10-2018 M634_12055 bacaa74d1a0a3555f45ec821674186c3 850 Gene3D G3DSA:3.40.50.2300 712 843 2.0E-31 T 12-10-2018 M634_17735 488fd3e09c589e6b4bee04dd72e9c5c0 323 SUPERFAMILY SSF81345 5 319 2.88E-80 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M634_17735 488fd3e09c589e6b4bee04dd72e9c5c0 323 Pfam PF01032 FecCD transport family 13 319 1.2E-93 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 M634_17735 488fd3e09c589e6b4bee04dd72e9c5c0 323 Gene3D G3DSA:1.10.3470.10 2 322 4.5E-96 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M634_22055 c9bcc966e02c3ef099ec93c47538720b 179 Pfam PF13275 S4 domain 25 86 1.0E-21 T 12-10-2018 M634_22055 c9bcc966e02c3ef099ec93c47538720b 179 SUPERFAMILY SSF55174 13 87 4.32E-17 T 12-10-2018 M634_22055 c9bcc966e02c3ef099ec93c47538720b 179 Gene3D G3DSA:3.10.290.10 17 88 6.3E-21 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 M634_16595 6faeedc228027393295f3cf75579c5d3 635 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 5 131 1.3E-41 T 12-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 M634_16595 6faeedc228027393295f3cf75579c5d3 635 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 146 1.8E-34 T 12-10-2018 IPR002178 PTS EIIA type-2 domain M634_16595 6faeedc228027393295f3cf75579c5d3 635 Gene3D G3DSA:3.40.930.10 1 147 1.7E-40 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 M634_16595 6faeedc228027393295f3cf75579c5d3 635 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 165 247 3.1E-31 T 12-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 M634_16595 6faeedc228027393295f3cf75579c5d3 635 Gene3D G3DSA:3.40.50.2300 155 263 2.2E-40 T 12-10-2018 M634_16595 6faeedc228027393295f3cf75579c5d3 635 Pfam PF02378 Phosphotransferase system, EIIC 292 567 2.1E-16 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 M634_16595 6faeedc228027393295f3cf75579c5d3 635 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 167 255 1.4E-15 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 M634_16595 6faeedc228027393295f3cf75579c5d3 635 SUPERFAMILY SSF52794 164 260 2.88E-35 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 M634_16595 6faeedc228027393295f3cf75579c5d3 635 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 278 620 6.2E-87 T 12-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 M634_16595 6faeedc228027393295f3cf75579c5d3 635 SUPERFAMILY SSF55804 1 145 1.96E-37 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 M634_12405 149280e3e48ea0d019e24ec5d450a213 196 Gene3D G3DSA:2.40.160.20 27 196 4.5E-11 T 12-10-2018 M634_12405 149280e3e48ea0d019e24ec5d450a213 196 SUPERFAMILY SSF56925 31 196 1.54E-19 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel M634_12405 149280e3e48ea0d019e24ec5d450a213 196 Pfam PF13505 Outer membrane protein beta-barrel domain 15 194 7.0E-7 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel M634_08230 70a6ed2e038b902ece80a4e6847977eb 325 SUPERFAMILY SSF46565 269 322 4.58E-13 T 12-10-2018 IPR036869 Chaperone J-domain superfamily M634_08230 70a6ed2e038b902ece80a4e6847977eb 325 Gene3D G3DSA:1.25.40.10 21 188 8.0E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_08230 70a6ed2e038b902ece80a4e6847977eb 325 Gene3D G3DSA:1.10.287.110 259 325 5.4E-12 T 12-10-2018 IPR036869 Chaperone J-domain superfamily M634_08230 70a6ed2e038b902ece80a4e6847977eb 325 SUPERFAMILY SSF81901 51 144 9.16E-9 T 12-10-2018 M634_20230 5694850fbc177f4c25661f721e474b34 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 5.8E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M634_20230 5694850fbc177f4c25661f721e474b34 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 5.8E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M634_20230 5694850fbc177f4c25661f721e474b34 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 5.8E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M634_20230 5694850fbc177f4c25661f721e474b34 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 5.8E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M634_20230 5694850fbc177f4c25661f721e474b34 138 SUPERFAMILY SSF46785 6 136 8.67E-32 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_20230 5694850fbc177f4c25661f721e474b34 138 SMART SM00347 24 124 3.4E-21 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M634_20230 5694850fbc177f4c25661f721e474b34 138 Pfam PF01047 MarR family 32 88 4.8E-14 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M634_20230 5694850fbc177f4c25661f721e474b34 138 Gene3D G3DSA:1.10.10.10 1 137 9.0E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_01375 cb5353e69ac428cd10f0058d593a1267 111 SUPERFAMILY SSF46785 5 85 1.47E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_01375 cb5353e69ac428cd10f0058d593a1267 111 Gene3D G3DSA:1.10.10.10 3 89 6.8E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_01375 cb5353e69ac428cd10f0058d593a1267 111 SMART SM00418 5 83 6.5E-24 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M634_01375 cb5353e69ac428cd10f0058d593a1267 111 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 29 47 - T 12-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 M634_01375 cb5353e69ac428cd10f0058d593a1267 111 Pfam PF01022 Bacterial regulatory protein, arsR family 12 57 7.6E-13 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M634_01375 cb5353e69ac428cd10f0058d593a1267 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 5.2E-20 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M634_01375 cb5353e69ac428cd10f0058d593a1267 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 5.2E-20 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M634_01375 cb5353e69ac428cd10f0058d593a1267 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 5.2E-20 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M634_01375 cb5353e69ac428cd10f0058d593a1267 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 5.2E-20 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M634_04950 bcc5dc35bb475b779789b2498d53febb 498 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 155 3.3E-22 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 M634_04950 bcc5dc35bb475b779789b2498d53febb 498 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 208 373 8.6E-26 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 M634_04950 bcc5dc35bb475b779789b2498d53febb 498 SUPERFAMILY SSF52540 139 471 7.13E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_04950 bcc5dc35bb475b779789b2498d53febb 498 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 465 6.3E-178 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 M634_04950 bcc5dc35bb475b779789b2498d53febb 498 PIRSF PIRSF006485 1 473 3.2E-179 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 M634_04950 bcc5dc35bb475b779789b2498d53febb 498 SMART SM00382 1 174 3.5 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_04950 bcc5dc35bb475b779789b2498d53febb 498 SMART SM00382 208 355 0.11 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_04950 bcc5dc35bb475b779789b2498d53febb 498 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 6.4E-10 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M634_04950 bcc5dc35bb475b779789b2498d53febb 498 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 6.4E-10 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M634_04950 bcc5dc35bb475b779789b2498d53febb 498 Hamap MF_00195 GTPase Der [der]. 2 468 39.212 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 M634_04950 bcc5dc35bb475b779789b2498d53febb 498 Gene3D G3DSA:3.30.300.20 385 467 5.9E-20 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta M634_04950 bcc5dc35bb475b779789b2498d53febb 498 Gene3D G3DSA:3.40.50.300 204 382 4.7E-50 T 12-10-2018 M634_04950 bcc5dc35bb475b779789b2498d53febb 498 SUPERFAMILY SSF52540 4 164 7.24E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_04950 bcc5dc35bb475b779789b2498d53febb 498 Pfam PF01926 50S ribosome-binding GTPase 212 329 1.8E-24 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M634_04950 bcc5dc35bb475b779789b2498d53febb 498 Pfam PF01926 50S ribosome-binding GTPase 5 120 5.1E-27 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M634_04950 bcc5dc35bb475b779789b2498d53febb 498 Gene3D G3DSA:3.40.50.300 2 160 9.3E-43 T 12-10-2018 M634_04950 bcc5dc35bb475b779789b2498d53febb 498 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 385 464 3.2E-25 T 12-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like M634_21290 f814ac71cb16a462f1c8b8e170f8d8b4 320 Pfam PF01882 Protein of unknown function DUF58 58 143 5.4E-20 T 12-10-2018 IPR002881 Domain of unknown function DUF58 M634_22360 08b507353d07849393ee6763b26ccd98 227 SUPERFAMILY SSF50891 93 220 3.07E-33 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily M634_22360 08b507353d07849393ee6763b26ccd98 227 SUPERFAMILY SSF160467 9 97 2.22E-12 T 12-10-2018 M634_22360 08b507353d07849393ee6763b26ccd98 227 SMART SM00796 6 203 4.7E-68 T 12-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D M634_22360 08b507353d07849393ee6763b26ccd98 227 Gene3D G3DSA:3.30.1360.40 7 77 1.0E-10 T 12-10-2018 M634_22360 08b507353d07849393ee6763b26ccd98 227 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 8 197 4.6E-52 T 12-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D M634_22360 08b507353d07849393ee6763b26ccd98 227 Gene3D G3DSA:2.40.100.10 91 226 1.7E-43 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily M634_20265 7aa379cd50d3546aaebf4d781e1f2725 118 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 70 81 - T 12-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 M634_20265 7aa379cd50d3546aaebf4d781e1f2725 118 Gene3D G3DSA:1.10.3830.10 3 118 1.7E-39 T 12-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 M634_20265 7aa379cd50d3546aaebf4d781e1f2725 118 Pfam PF01219 Prokaryotic diacylglycerol kinase 16 115 4.8E-35 T 12-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 M634_24440 f413e8a32741267119103482ece09b20 301 Pfam PF00892 EamA-like transporter family 151 280 5.3E-19 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M634_24440 f413e8a32741267119103482ece09b20 301 Pfam PF00892 EamA-like transporter family 3 135 3.5E-19 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M634_24440 f413e8a32741267119103482ece09b20 301 SUPERFAMILY SSF103481 35 138 3.4E-11 T 12-10-2018 M634_24440 f413e8a32741267119103482ece09b20 301 SUPERFAMILY SSF103481 187 283 1.31E-10 T 12-10-2018 M634_12820 789d8f5f5cf96761e6245e662a686683 293 Gene3D G3DSA:3.30.1330.60 176 293 1.2E-39 T 12-10-2018 IPR036737 OmpA-like domain superfamily M634_12820 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 148 167 1.1E-174 T 12-10-2018 M634_12820 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 45 63 1.1E-174 T 12-10-2018 M634_12820 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 66 84 1.1E-174 T 12-10-2018 M634_12820 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 204 230 1.1E-174 T 12-10-2018 M634_12820 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 233 250 1.1E-174 T 12-10-2018 M634_12820 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 28 44 1.1E-174 T 12-10-2018 M634_12820 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 123 145 1.1E-174 T 12-10-2018 M634_12820 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 104 121 1.1E-174 T 12-10-2018 M634_12820 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 251 270 1.1E-174 T 12-10-2018 M634_12820 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 174 201 1.1E-174 T 12-10-2018 M634_12820 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 3 27 1.1E-174 T 12-10-2018 M634_12820 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 85 103 1.1E-174 T 12-10-2018 M634_12820 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 271 291 1.1E-174 T 12-10-2018 M634_12820 789d8f5f5cf96761e6245e662a686683 293 ProSitePatterns PS01068 OmpA-like domain. 220 264 - T 12-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 M634_12820 789d8f5f5cf96761e6245e662a686683 293 Gene3D G3DSA:2.60.40.2540 22 175 1.6E-58 T 12-10-2018 M634_12820 789d8f5f5cf96761e6245e662a686683 293 Pfam PF00691 OmpA family 187 282 3.2E-19 T 12-10-2018 IPR006665 OmpA-like domain M634_12820 789d8f5f5cf96761e6245e662a686683 293 SUPERFAMILY SSF103088 158 287 1.16E-25 T 12-10-2018 IPR036737 OmpA-like domain superfamily M634_22880 b3ee31529672e252a306b2d9571b1d11 898 Pfam PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase 695 769 3.4E-10 T 12-10-2018 IPR018905 Alpha-galactosidase, NEW3 domain M634_22880 b3ee31529672e252a306b2d9571b1d11 898 Pfam PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase 579 653 2.2E-9 T 12-10-2018 IPR018905 Alpha-galactosidase, NEW3 domain M634_22880 b3ee31529672e252a306b2d9571b1d11 898 Pfam PF05548 Gametolysin peptidase M11 305 456 7.3E-14 T 12-10-2018 IPR008752 Peptidase M11, gametolysin M634_22880 b3ee31529672e252a306b2d9571b1d11 898 Gene3D G3DSA:2.60.40.10 567 671 2.6E-5 T 12-10-2018 IPR013783 Immunoglobulin-like fold M634_22880 b3ee31529672e252a306b2d9571b1d11 898 Gene3D G3DSA:2.60.40.10 679 786 2.3E-9 T 12-10-2018 IPR013783 Immunoglobulin-like fold M634_22880 b3ee31529672e252a306b2d9571b1d11 898 SUPERFAMILY SSF55486 250 397 1.86E-10 T 12-10-2018 M634_07955 6973f3e1692c8e67a8442ae8e2cb5a76 92 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 1 92 3.0E-38 T 12-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 M634_07955 6973f3e1692c8e67a8442ae8e2cb5a76 92 SUPERFAMILY SSF50715 1 92 4.19E-28 T 12-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 M634_07955 6973f3e1692c8e67a8442ae8e2cb5a76 92 Gene3D G3DSA:2.40.240.10 1 92 7.2E-34 T 12-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 M634_07955 6973f3e1692c8e67a8442ae8e2cb5a76 92 Pfam PF01386 Ribosomal L25p family 4 89 4.3E-22 T 12-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 M634_07955 6973f3e1692c8e67a8442ae8e2cb5a76 92 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 1 92 26.525 T 12-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 M634_22300 d13ccd52abccb16c2b2299a712d08df3 198 PIRSF PIRSF020606 1 198 1.7E-82 T 12-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 M634_22300 d13ccd52abccb16c2b2299a712d08df3 198 Pfam PF09997 Predicted membrane protein (DUF2238) 41 176 1.8E-51 T 12-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 M634_24205 3e9b5d29529cca062f85877b31ea6518 205 Pfam PF02525 Flavodoxin-like fold 4 173 2.3E-44 T 12-10-2018 IPR003680 Flavodoxin-like fold M634_24205 3e9b5d29529cca062f85877b31ea6518 205 Gene3D G3DSA:3.40.50.360 1 181 1.2E-51 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M634_24205 3e9b5d29529cca062f85877b31ea6518 205 SUPERFAMILY SSF52218 4 180 3.14E-49 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M634_23635 64a0300464bf8ca925195613584c2183 102 Pfam PF06945 Protein of unknown function (DUF1289) 3 45 1.7E-14 T 12-10-2018 IPR010710 Protein of unknown function DUF1289 M634_23635 64a0300464bf8ca925195613584c2183 102 Pfam PF14375 Cysteine-rich CWC 53 97 9.6E-6 T 12-10-2018 IPR032720 Cysteine-rich CWC M634_07710 55d165677ed9bfbb690acea144b31fe9 270 Pfam PF03649 Uncharacterised protein family (UPF0014) 9 245 4.8E-71 T 12-10-2018 IPR005226 UPF0014 family M634_07085 8555dfc45a1348144837430437f29f51 233 PIRSF PIRSF037208 1 233 7.3E-90 T 12-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 M634_07085 8555dfc45a1348144837430437f29f51 233 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 16 86 3.0E-19 T 12-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 M634_07085 8555dfc45a1348144837430437f29f51 233 SUPERFAMILY SSF55729 80 232 4.24E-22 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_07085 8555dfc45a1348144837430437f29f51 233 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 6 232 37.475 T 12-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 M634_07085 8555dfc45a1348144837430437f29f51 233 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 105 226 2.8E-31 T 12-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 M634_21310 ac09e502f4f326d6a48eb84b2f7676db 438 Pfam PF13584 Oxygen tolerance 70 299 5.3E-26 T 12-10-2018 IPR025738 Aerotolerance-related protein BatD M634_07720 555bcee78a2dc77382ef0913578fe602 394 PIRSF PIRSF000014 1 394 1.5E-158 T 12-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 M634_07720 555bcee78a2dc77382ef0913578fe602 394 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 16 186 4.3E-71 T 12-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal M634_07720 555bcee78a2dc77382ef0913578fe602 394 Gene3D G3DSA:1.10.3820.10 15 192 4.4E-38 T 12-10-2018 IPR038266 NapC/NirT cytochrome c superfamily M634_07720 555bcee78a2dc77382ef0913578fe602 394 SUPERFAMILY SSF48695 12 187 7.18E-59 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily M634_07720 555bcee78a2dc77382ef0913578fe602 394 TIGRFAM TIGR02162 torC: trimethylamine-N-oxide reductase c-type cytochrome TorC 7 394 3.0E-186 T 12-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 M634_07720 555bcee78a2dc77382ef0913578fe602 394 SUPERFAMILY SSF46626 307 386 6.92E-5 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_18745 76e33631734614a1946566f1ea4724e8 461 Gene3D G3DSA:3.30.2290.10 3 221 2.9E-18 T 12-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal M634_18745 76e33631734614a1946566f1ea4724e8 461 Pfam PF01523 Putative modulator of DNA gyrase 21 314 5.9E-62 T 12-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 M634_18745 76e33631734614a1946566f1ea4724e8 461 SUPERFAMILY SSF111283 7 459 4.05E-113 T 12-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 M634_18745 76e33631734614a1946566f1ea4724e8 461 PIRSF PIRSF004919 1 461 5.7E-115 T 12-10-2018 IPR025502 TldD M634_11375 3e9e52a30e2f8d6fcfe4871cf154607b 803 Pfam PF12421 Fibronectin type III protein 620 688 5.3E-14 T 12-10-2018 IPR021034 Domain of unknown function, DUF3672 M634_22060 37dff6ee5f0643c49afae92b7a8f9386 272 SUPERFAMILY SSF141868 25 264 1.28E-50 T 12-10-2018 IPR035919 EAL domain superfamily M634_22060 37dff6ee5f0643c49afae92b7a8f9386 272 SMART SM00052 13 260 1.9E-13 T 12-10-2018 IPR001633 EAL domain M634_22060 37dff6ee5f0643c49afae92b7a8f9386 272 Pfam PF00563 EAL domain 28 255 8.4E-44 T 12-10-2018 IPR001633 EAL domain M634_22060 37dff6ee5f0643c49afae92b7a8f9386 272 Gene3D G3DSA:3.20.20.450 22 270 2.4E-47 T 12-10-2018 IPR035919 EAL domain superfamily M634_19230 505611999054de3a7be4ac5c71e09fef 132 Gene3D G3DSA:3.30.300.20 35 132 2.4E-24 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta M634_19230 505611999054de3a7be4ac5c71e09fef 132 Gene3D G3DSA:2.20.25.10 1 34 1.8E-20 T 12-10-2018 M634_19230 505611999054de3a7be4ac5c71e09fef 132 Pfam PF02566 OsmC-like protein 29 127 8.4E-17 T 12-10-2018 IPR003718 OsmC/Ohr family M634_19230 505611999054de3a7be4ac5c71e09fef 132 SUPERFAMILY SSF82784 1 131 3.27E-39 T 12-10-2018 IPR036102 OsmC/Ohr superfamily M634_14845 94083b5652906dce9982eb5758fd5532 541 SUPERFAMILY SSF161098 282 535 9.03E-39 T 12-10-2018 IPR035906 MetI-like superfamily M634_14845 94083b5652906dce9982eb5758fd5532 541 Gene3D G3DSA:1.10.3720.10 11 267 1.1E-53 T 12-10-2018 IPR035906 MetI-like superfamily M634_14845 94083b5652906dce9982eb5758fd5532 541 SUPERFAMILY SSF161098 8 257 1.83E-44 T 12-10-2018 IPR035906 MetI-like superfamily M634_14845 94083b5652906dce9982eb5758fd5532 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 68 254 1.3E-14 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_14845 94083b5652906dce9982eb5758fd5532 541 Gene3D G3DSA:1.10.3720.10 285 540 6.7E-35 T 12-10-2018 IPR035906 MetI-like superfamily M634_11725 8238576b741fd1d26fc391ea07a6b7f3 239 Gene3D G3DSA:3.30.420.10 44 230 1.3E-37 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M634_11725 8238576b741fd1d26fc391ea07a6b7f3 239 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 44 229 7.1E-23 T 12-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_11725 8238576b741fd1d26fc391ea07a6b7f3 239 Pfam PF00929 Exonuclease 50 220 8.2E-13 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III M634_11725 8238576b741fd1d26fc391ea07a6b7f3 239 SMART SM00479 48 229 4.1E-21 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III M634_11725 8238576b741fd1d26fc391ea07a6b7f3 239 SUPERFAMILY SSF53098 40 227 6.4E-39 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M634_14375 d4ac250682c7b3e0879f8c1b73354214 386 Gene3D G3DSA:3.30.70.890 203 358 1.5E-132 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily M634_14375 d4ac250682c7b3e0879f8c1b73354214 386 PIRSF PIRSF000530 1 385 3.1E-129 T 12-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 M634_14375 d4ac250682c7b3e0879f8c1b73354214 386 ProSitePatterns PS00106 Galactokinase signature. 28 39 - T 12-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 M634_14375 d4ac250682c7b3e0879f8c1b73354214 386 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 122 133 - T 12-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 M634_14375 d4ac250682c7b3e0879f8c1b73354214 386 PRINTS PR00959 Mevalonate kinase family signature 26 50 4.3E-44 T 12-10-2018 M634_14375 d4ac250682c7b3e0879f8c1b73354214 386 PRINTS PR00959 Mevalonate kinase family signature 120 142 4.3E-44 T 12-10-2018 M634_14375 d4ac250682c7b3e0879f8c1b73354214 386 PRINTS PR00959 Mevalonate kinase family signature 329 346 4.3E-44 T 12-10-2018 M634_14375 d4ac250682c7b3e0879f8c1b73354214 386 PRINTS PR00959 Mevalonate kinase family signature 163 182 4.3E-44 T 12-10-2018 M634_14375 d4ac250682c7b3e0879f8c1b73354214 386 PRINTS PR00473 Galactokinase signature 93 104 9.4E-30 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 M634_14375 d4ac250682c7b3e0879f8c1b73354214 386 PRINTS PR00473 Galactokinase signature 264 278 9.4E-30 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 M634_14375 d4ac250682c7b3e0879f8c1b73354214 386 PRINTS PR00473 Galactokinase signature 113 131 9.4E-30 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 M634_14375 d4ac250682c7b3e0879f8c1b73354214 386 PRINTS PR00473 Galactokinase signature 28 46 9.4E-30 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 M634_14375 d4ac250682c7b3e0879f8c1b73354214 386 SUPERFAMILY SSF54211 2 204 5.62E-65 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M634_14375 d4ac250682c7b3e0879f8c1b73354214 386 Gene3D G3DSA:3.30.230.10 23 202 1.5E-132 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup M634_14375 d4ac250682c7b3e0879f8c1b73354214 386 Pfam PF08544 GHMP kinases C terminal 280 361 2.0E-10 T 12-10-2018 IPR013750 GHMP kinase, C-terminal domain M634_14375 d4ac250682c7b3e0879f8c1b73354214 386 Hamap MF_00246 Galactokinase [galK]. 26 382 43.922 T 12-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 M634_14375 d4ac250682c7b3e0879f8c1b73354214 386 Pfam PF00288 GHMP kinases N terminal domain 115 181 7.9E-11 T 12-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 M634_14375 d4ac250682c7b3e0879f8c1b73354214 386 SUPERFAMILY SSF55060 206 382 4.64E-53 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily M634_14375 d4ac250682c7b3e0879f8c1b73354214 386 Pfam PF10509 Galactokinase galactose-binding signature 11 59 5.9E-22 T 12-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 M634_14375 d4ac250682c7b3e0879f8c1b73354214 386 TIGRFAM TIGR00131 gal_kin: galactokinase 6 381 3.0E-147 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 M634_17685 8f81a9bfeb5f2cdf4573fa9d72f540cd 402 Pfam PF02264 LamB porin 25 402 4.2E-96 T 12-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 M634_17685 8f81a9bfeb5f2cdf4573fa9d72f540cd 402 Gene3D G3DSA:2.40.170.10 23 402 4.6E-106 T 12-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 M634_17685 8f81a9bfeb5f2cdf4573fa9d72f540cd 402 SUPERFAMILY SSF56935 23 402 3.07E-107 T 12-10-2018 M634_17685 8f81a9bfeb5f2cdf4573fa9d72f540cd 402 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 30 371 8.0E-142 T 12-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 M634_09835 642bac8391c36bb22c5d5d681c57a24d 272 Gene3D G3DSA:3.40.190.10 106 218 4.6E-99 T 12-10-2018 M634_09835 642bac8391c36bb22c5d5d681c57a24d 272 Pfam PF12849 PBP superfamily domain 30 247 2.1E-31 T 12-10-2018 IPR024370 PBP domain M634_09835 642bac8391c36bb22c5d5d681c57a24d 272 Gene3D G3DSA:3.40.190.10 31 255 4.6E-99 T 12-10-2018 M634_09835 642bac8391c36bb22c5d5d681c57a24d 272 SUPERFAMILY SSF53850 29 256 1.14E-32 T 12-10-2018 M634_17330 a9030229f059817d588d40089eab1a26 296 Gene3D G3DSA:2.40.30.170 170 295 1.4E-27 T 12-10-2018 M634_17330 a9030229f059817d588d40089eab1a26 296 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 233 3.5E-28 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 M634_17330 a9030229f059817d588d40089eab1a26 296 Gene3D G3DSA:2.40.50.100 42 101 5.1E-13 T 12-10-2018 M634_17330 a9030229f059817d588d40089eab1a26 296 SUPERFAMILY SSF111369 42 242 1.44E-21 T 12-10-2018 M634_17330 a9030229f059817d588d40089eab1a26 296 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 42 235 4.1E-17 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M634_20790 8a8cdca22a18e7a597cd93549ec03838 545 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 179 194 4.0E-6 T 12-10-2018 M634_20790 8a8cdca22a18e7a597cd93549ec03838 545 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 4.0E-6 T 12-10-2018 M634_20790 8a8cdca22a18e7a597cd93549ec03838 545 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 442 542 6.5E-48 T 12-10-2018 M634_20790 8a8cdca22a18e7a597cd93549ec03838 545 Gene3D G3DSA:3.50.50.60 7 382 1.0E-188 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_20790 8a8cdca22a18e7a597cd93549ec03838 545 Pfam PF13450 NAD(P)-binding Rossmann-like domain 12 57 1.8E-6 T 12-10-2018 M634_20790 8a8cdca22a18e7a597cd93549ec03838 545 SUPERFAMILY SSF54862 446 545 1.49E-27 T 12-10-2018 M634_20790 8a8cdca22a18e7a597cd93549ec03838 545 Gene3D G3DSA:3.30.70.20 447 540 2.3E-37 T 12-10-2018 M634_20790 8a8cdca22a18e7a597cd93549ec03838 545 Gene3D G3DSA:3.30.9.90 79 446 1.0E-188 T 12-10-2018 M634_20790 8a8cdca22a18e7a597cd93549ec03838 545 SUPERFAMILY SSF51905 4 444 1.45E-52 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_20790 8a8cdca22a18e7a597cd93549ec03838 545 SUPERFAMILY SSF54373 211 306 1.61E-36 T 12-10-2018 M634_04520 3dc0476756d33b1c6e22dc315deab4f3 296 Gene3D G3DSA:3.40.190.290 95 293 1.1E-9 T 12-10-2018 M634_04520 3dc0476756d33b1c6e22dc315deab4f3 296 Gene3D G3DSA:1.10.10.10 4 92 5.2E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_04520 3dc0476756d33b1c6e22dc315deab4f3 296 SUPERFAMILY SSF53850 90 288 7.19E-26 T 12-10-2018 M634_04520 3dc0476756d33b1c6e22dc315deab4f3 296 Pfam PF03466 LysR substrate binding domain 96 288 7.3E-13 T 12-10-2018 IPR005119 LysR, substrate-binding M634_04520 3dc0476756d33b1c6e22dc315deab4f3 296 SUPERFAMILY SSF46785 2 85 1.03E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_04520 3dc0476756d33b1c6e22dc315deab4f3 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 3.6E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_13370 b877593ce5c9f069bb1f371b15bc6378 403 SUPERFAMILY SSF53901 213 401 1.38E-62 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M634_13370 b877593ce5c9f069bb1f371b15bc6378 403 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 358 1.3E-27 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal M634_13370 b877593ce5c9f069bb1f371b15bc6378 403 Gene3D G3DSA:3.40.47.10 1 253 6.6E-69 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M634_13370 b877593ce5c9f069bb1f371b15bc6378 403 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site M634_13370 b877593ce5c9f069bb1f371b15bc6378 403 SMART SM00825 Beta-ketoacyl synthase 4 403 1.0E-14 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain M634_13370 b877593ce5c9f069bb1f371b15bc6378 403 Gene3D G3DSA:3.40.47.10 258 401 4.2E-50 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M634_13370 b877593ce5c9f069bb1f371b15bc6378 403 SUPERFAMILY SSF53901 1 251 4.32E-67 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M634_13370 b877593ce5c9f069bb1f371b15bc6378 403 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 4.5E-46 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal M634_24485 795a7a088d137bc5927cfdbd35a473ce 170 Pfam PF02794 RTX toxin acyltransferase family 9 127 6.6E-41 T 12-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 M634_24485 795a7a088d137bc5927cfdbd35a473ce 170 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 75 97 1.5E-41 T 12-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 M634_24485 795a7a088d137bc5927cfdbd35a473ce 170 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 11 27 1.5E-41 T 12-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 M634_24485 795a7a088d137bc5927cfdbd35a473ce 170 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 53 71 1.5E-41 T 12-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 M634_24485 795a7a088d137bc5927cfdbd35a473ce 170 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 129 150 1.5E-41 T 12-10-2018 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 M634_12035 25886a119ea66981975b10cd0d4648a2 230 SUPERFAMILY SSF46785 149 225 5.97E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_12035 25886a119ea66981975b10cd0d4648a2 230 Gene3D G3DSA:2.60.120.10 2 145 1.0E-23 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M634_12035 25886a119ea66981975b10cd0d4648a2 230 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 176 192 2.4E-5 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 M634_12035 25886a119ea66981975b10cd0d4648a2 230 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 192 207 2.4E-5 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 M634_12035 25886a119ea66981975b10cd0d4648a2 230 SMART SM00100 13 131 2.8E-11 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain M634_12035 25886a119ea66981975b10cd0d4648a2 230 Gene3D G3DSA:1.10.10.10 149 228 6.3E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_12035 25886a119ea66981975b10cd0d4648a2 230 Pfam PF00027 Cyclic nucleotide-binding domain 32 119 2.2E-14 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain M634_12035 25886a119ea66981975b10cd0d4648a2 230 Pfam PF13545 Crp-like helix-turn-helix domain 151 224 2.8E-13 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 M634_12035 25886a119ea66981975b10cd0d4648a2 230 SMART SM00419 170 218 5.4E-6 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 M634_12035 25886a119ea66981975b10cd0d4648a2 230 SUPERFAMILY SSF51206 1 142 7.86E-27 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like M634_13685 aabd9421d9f547ebf9d231c105ea1ba1 144 Gene3D G3DSA:3.30.160.170 43 141 5.1E-13 T 12-10-2018 IPR035924 FlaG-like superfamily M634_13685 aabd9421d9f547ebf9d231c105ea1ba1 144 Pfam PF03646 FlaG protein 44 142 6.2E-25 T 12-10-2018 IPR005186 FlaG protein M634_13685 aabd9421d9f547ebf9d231c105ea1ba1 144 SUPERFAMILY SSF160214 62 143 2.88E-22 T 12-10-2018 IPR035924 FlaG-like superfamily M634_14865 521509d193476832135cf0823d1c265f 122 PIRSF PIRSF006287 1 122 9.5E-50 T 12-10-2018 IPR008249 Uncharacterised protein family UPF0231 M634_14865 521509d193476832135cf0823d1c265f 122 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 120 7.0E-65 T 12-10-2018 IPR008249 Uncharacterised protein family UPF0231 M634_14865 521509d193476832135cf0823d1c265f 122 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 120 1.8E-42 T 12-10-2018 IPR008249 Uncharacterised protein family UPF0231 M634_14865 521509d193476832135cf0823d1c265f 122 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 122 31.269 T 12-10-2018 IPR008249 Uncharacterised protein family UPF0231 M634_17995 f6acf66ebc9816d15ede0e4688ff7644 183 Pfam PF10688 Bacterial inner membrane protein 4 160 2.5E-52 T 12-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV M634_17995 f6acf66ebc9816d15ede0e4688ff7644 183 PIRSF PIRSF011443 1 178 2.1E-45 T 12-10-2018 IPR026267 Inner membrane protein YgjV M634_22785 97ac99ff4c78bb8b47307882d543cf97 169 Gene3D G3DSA:3.40.630.30 1 165 7.2E-39 T 12-10-2018 M634_22785 97ac99ff4c78bb8b47307882d543cf97 169 SUPERFAMILY SSF55729 2 156 2.24E-37 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_22785 97ac99ff4c78bb8b47307882d543cf97 169 Pfam PF13302 Acetyltransferase (GNAT) domain 8 148 4.7E-27 T 12-10-2018 IPR000182 GNAT domain M634_09360 24980086542cd85425ad858429fde761 401 SUPERFAMILY SSF161098 193 382 1.83E-23 T 12-10-2018 IPR035906 MetI-like superfamily M634_09360 24980086542cd85425ad858429fde761 401 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 396 3.9E-11 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_09360 24980086542cd85425ad858429fde761 401 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 91 155 1.4E-16 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 M634_09360 24980086542cd85425ad858429fde761 401 Gene3D G3DSA:1.10.3720.10 189 397 1.9E-31 T 12-10-2018 IPR035906 MetI-like superfamily M634_09360 24980086542cd85425ad858429fde761 401 SUPERFAMILY SSF161098 91 162 7.36E-11 T 12-10-2018 IPR035906 MetI-like superfamily M634_17015 f118dce6f3d12463f55e9f25931d19ac 310 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 117 291 9.8E-17 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M634_17015 f118dce6f3d12463f55e9f25931d19ac 310 SMART SM00062 38 294 1.3E-15 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M634_17015 f118dce6f3d12463f55e9f25931d19ac 310 SUPERFAMILY SSF53850 10 292 9.78E-37 T 12-10-2018 M634_17015 f118dce6f3d12463f55e9f25931d19ac 310 Gene3D G3DSA:3.40.190.10 21 165 2.1E-20 T 12-10-2018 M634_17015 f118dce6f3d12463f55e9f25931d19ac 310 Gene3D G3DSA:3.40.190.10 198 294 4.0E-10 T 12-10-2018 M634_11110 f1cc8205d6d937686516d708ab8644a7 257 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 217 256 7.8E-12 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 M634_11110 f1cc8205d6d937686516d708ab8644a7 257 Pfam PF08378 Nuclease-related domain 33 143 5.1E-31 T 12-10-2018 IPR011528 Nuclease-related domain, NERD M634_11110 f1cc8205d6d937686516d708ab8644a7 257 SUPERFAMILY SSF57783 214 255 1.65E-7 T 12-10-2018 M634_11110 f1cc8205d6d937686516d708ab8644a7 257 Gene3D G3DSA:3.30.65.10 204 257 1.1E-6 T 12-10-2018 M634_12555 16c1db47ed342c3b28bba00c4e700ba3 279 SUPERFAMILY SSF46785 12 74 9.45E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_12555 16c1db47ed342c3b28bba00c4e700ba3 279 Pfam PF07840 FadR C-terminal domain 72 274 3.8E-70 T 12-10-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 M634_12555 16c1db47ed342c3b28bba00c4e700ba3 279 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 279 138.354 T 12-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 M634_12555 16c1db47ed342c3b28bba00c4e700ba3 279 SUPERFAMILY SSF48008 79 270 8.63E-57 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal M634_12555 16c1db47ed342c3b28bba00c4e700ba3 279 Gene3D G3DSA:1.20.120.530 80 149 3.1E-7 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal M634_12555 16c1db47ed342c3b28bba00c4e700ba3 279 Gene3D G3DSA:1.20.120.530 153 279 2.7E-26 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal M634_12555 16c1db47ed342c3b28bba00c4e700ba3 279 Gene3D G3DSA:1.10.10.10 1 79 1.3E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_12555 16c1db47ed342c3b28bba00c4e700ba3 279 SMART SM00345 12 71 1.6E-22 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_12555 16c1db47ed342c3b28bba00c4e700ba3 279 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 71 3.1E-20 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_12555 16c1db47ed342c3b28bba00c4e700ba3 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 3.5E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_12555 16c1db47ed342c3b28bba00c4e700ba3 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 3.5E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 M634_12555 16c1db47ed342c3b28bba00c4e700ba3 279 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 276 3.8E-115 T 12-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 M634_14160 700b8c97db18dcd503ec8cc54d77adc9 385 Pfam PF08468 Methyltransferase small domain N-terminal 48 165 2.7E-5 T 12-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 M634_14160 700b8c97db18dcd503ec8cc54d77adc9 385 Gene3D G3DSA:3.40.50.150 8 182 1.0E-51 T 12-10-2018 M634_14160 700b8c97db18dcd503ec8cc54d77adc9 385 PIRSF PIRSF037565 1 377 2.2E-173 T 12-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 M634_14160 700b8c97db18dcd503ec8cc54d77adc9 385 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 2 376 48.772 T 12-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 M634_14160 700b8c97db18dcd503ec8cc54d77adc9 385 Gene3D G3DSA:3.40.50.150 188 381 1.3E-46 T 12-10-2018 M634_14160 700b8c97db18dcd503ec8cc54d77adc9 385 SUPERFAMILY SSF53335 196 370 2.16E-27 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_14160 700b8c97db18dcd503ec8cc54d77adc9 385 Pfam PF05175 Methyltransferase small domain 200 373 1.7E-55 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 M634_07215 f666418401e100f502d897e2f9b33c5d 289 Gene3D G3DSA:3.20.20.410 2 273 1.6E-46 T 12-10-2018 IPR036520 UPF0759 superfamily M634_07215 f666418401e100f502d897e2f9b33c5d 289 Pfam PF01904 Protein of unknown function DUF72 24 262 1.1E-56 T 12-10-2018 IPR002763 Protein of unknown function DUF72 M634_07215 f666418401e100f502d897e2f9b33c5d 289 SUPERFAMILY SSF117396 6 266 1.7E-72 T 12-10-2018 IPR036520 UPF0759 superfamily M634_03680 92629e8a7489c419c3b70e3485810bbb 284 SUPERFAMILY SSF46565 215 278 7.63E-17 T 12-10-2018 IPR036869 Chaperone J-domain superfamily M634_03680 92629e8a7489c419c3b70e3485810bbb 284 Gene3D G3DSA:1.10.3680.10 45 191 2.3E-26 T 12-10-2018 IPR029024 TerB-like M634_03680 92629e8a7489c419c3b70e3485810bbb 284 SUPERFAMILY SSF158682 5 230 6.28E-32 T 12-10-2018 IPR029024 TerB-like M634_03680 92629e8a7489c419c3b70e3485810bbb 284 Pfam PF05099 Tellurite resistance protein TerB 44 177 9.0E-18 T 12-10-2018 IPR007791 Co-chaperone DjlA, N-terminal M634_03680 92629e8a7489c419c3b70e3485810bbb 284 Pfam PF00226 DnaJ domain 218 278 7.0E-12 T 12-10-2018 IPR001623 DnaJ domain M634_03680 92629e8a7489c419c3b70e3485810bbb 284 PRINTS PR00625 DnaJ domain signature 238 253 1.2E-8 T 12-10-2018 IPR001623 DnaJ domain M634_03680 92629e8a7489c419c3b70e3485810bbb 284 PRINTS PR00625 DnaJ domain signature 262 282 1.2E-8 T 12-10-2018 IPR001623 DnaJ domain M634_03680 92629e8a7489c419c3b70e3485810bbb 284 PRINTS PR00625 DnaJ domain signature 220 238 1.2E-8 T 12-10-2018 IPR001623 DnaJ domain M634_03680 92629e8a7489c419c3b70e3485810bbb 284 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 283 39.509 T 12-10-2018 IPR023749 Co-chaperone DjlA GO:0051087 M634_03680 92629e8a7489c419c3b70e3485810bbb 284 SMART SM00271 217 282 1.0E-17 T 12-10-2018 IPR001623 DnaJ domain M634_03680 92629e8a7489c419c3b70e3485810bbb 284 Gene3D G3DSA:1.10.287.110 194 282 1.1E-16 T 12-10-2018 IPR036869 Chaperone J-domain superfamily M634_10000 4405da35d7f127fd6db030476022f700 390 Pfam PF00534 Glycosyl transferases group 1 192 336 1.1E-12 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 M634_10000 4405da35d7f127fd6db030476022f700 390 SUPERFAMILY SSF53756 10 359 6.28E-29 T 12-10-2018 M634_10000 4405da35d7f127fd6db030476022f700 390 Gene3D G3DSA:3.40.50.2000 9 358 1.3E-20 T 12-10-2018 M634_10000 4405da35d7f127fd6db030476022f700 390 Gene3D G3DSA:3.40.50.2000 175 350 1.3E-20 T 12-10-2018 M634_21155 04dd878d33224f1357aaf5ad30e562d5 302 SUPERFAMILY SSF53807 21 282 5.23E-59 T 12-10-2018 M634_21155 04dd878d33224f1357aaf5ad30e562d5 302 Pfam PF01497 Periplasmic binding protein 64 275 1.5E-21 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain M634_21155 04dd878d33224f1357aaf5ad30e562d5 302 Gene3D G3DSA:3.40.50.1980 25 280 3.7E-88 T 12-10-2018 M634_21155 04dd878d33224f1357aaf5ad30e562d5 302 Gene3D G3DSA:3.40.50.1980 171 274 3.7E-88 T 12-10-2018 M634_23790 fd90f04fc427ac658b38662de956cfb5 181 Pfam PF07152 YaeQ protein 1 171 5.2E-65 T 12-10-2018 IPR009822 YaeQ M634_23790 fd90f04fc427ac658b38662de956cfb5 181 PIRSF PIRSF011484 1 179 1.1E-62 T 12-10-2018 IPR009822 YaeQ M634_23790 fd90f04fc427ac658b38662de956cfb5 181 SUPERFAMILY SSF52980 2 177 9.92E-63 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 M634_23790 fd90f04fc427ac658b38662de956cfb5 181 Gene3D G3DSA:3.10.640.10 1 179 9.7E-65 T 12-10-2018 IPR038590 YaeQ superfamily M634_23790 fd90f04fc427ac658b38662de956cfb5 181 SMART SM01322 1 174 8.5E-96 T 12-10-2018 IPR009822 YaeQ M634_07455 9a19bd7a8f3a93a85de4e77ab43779c1 208 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 12 207 3.4E-63 T 12-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 M634_07455 9a19bd7a8f3a93a85de4e77ab43779c1 208 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 13 206 31.852 T 12-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 M634_07455 9a19bd7a8f3a93a85de4e77ab43779c1 208 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 39 196 1.3E-55 T 12-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like M634_07455 9a19bd7a8f3a93a85de4e77ab43779c1 208 SUPERFAMILY SSF89392 30 207 2.63E-51 T 12-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX M634_07455 9a19bd7a8f3a93a85de4e77ab43779c1 208 Gene3D G3DSA:2.50.20.10 25 207 2.1E-47 T 12-10-2018 M634_00805 d55c4704de101a2184f1ecd306869806 229 SUPERFAMILY SSF46894 124 226 9.07E-25 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M634_00805 d55c4704de101a2184f1ecd306869806 229 SMART SM00448 2 111 1.0E-43 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_00805 d55c4704de101a2184f1ecd306869806 229 Gene3D G3DSA:3.40.50.2300 1 128 8.0E-38 T 12-10-2018 M634_00805 d55c4704de101a2184f1ecd306869806 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 225 6.4E-21 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_00805 d55c4704de101a2184f1ecd306869806 229 SUPERFAMILY SSF52172 1 123 2.85E-39 T 12-10-2018 IPR011006 CheY-like superfamily M634_00805 d55c4704de101a2184f1ecd306869806 229 SMART SM00862 149 225 1.4E-21 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_00805 d55c4704de101a2184f1ecd306869806 229 Gene3D G3DSA:1.10.10.10 129 229 1.4E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_00805 d55c4704de101a2184f1ecd306869806 229 Pfam PF00072 Response regulator receiver domain 4 112 1.2E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_10390 6e61cd473db72ec16304fdd0a5f4b8c4 494 SUPERFAMILY SSF53720 7 492 4.32E-169 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 M634_10390 6e61cd473db72ec16304fdd0a5f4b8c4 494 Gene3D G3DSA:3.40.309.10 269 458 3.9E-181 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 M634_10390 6e61cd473db72ec16304fdd0a5f4b8c4 494 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 264 271 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 M634_10390 6e61cd473db72ec16304fdd0a5f4b8c4 494 Pfam PF00171 Aldehyde dehydrogenase family 33 487 5.0E-173 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 M634_10390 6e61cd473db72ec16304fdd0a5f4b8c4 494 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 293 304 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 M634_10390 6e61cd473db72ec16304fdd0a5f4b8c4 494 Gene3D G3DSA:3.40.605.10 22 486 3.9E-181 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 M634_16330 ea252004bbc5e75b6678e017868aef4f 95 Gene3D G3DSA:3.60.15.30 19 95 3.6E-17 T 12-10-2018 M634_16330 ea252004bbc5e75b6678e017868aef4f 95 SUPERFAMILY SSF56281 22 95 2.59E-8 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M634_18515 96b533aaedd8200bd0d40923a8899345 268 PRINTS PR01543 Arylamine N-acetyltransferase signature 22 45 1.9E-9 T 12-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 M634_18515 96b533aaedd8200bd0d40923a8899345 268 PRINTS PR01543 Arylamine N-acetyltransferase signature 46 69 1.9E-9 T 12-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 M634_18515 96b533aaedd8200bd0d40923a8899345 268 PRINTS PR01543 Arylamine N-acetyltransferase signature 100 125 1.9E-9 T 12-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 M634_18515 96b533aaedd8200bd0d40923a8899345 268 SUPERFAMILY SSF54001 2 257 3.92E-74 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily M634_18515 96b533aaedd8200bd0d40923a8899345 268 Pfam PF00797 N-acetyltransferase 22 258 1.9E-72 T 12-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 M634_18515 96b533aaedd8200bd0d40923a8899345 268 Gene3D G3DSA:3.30.2140.10 6 253 4.9E-71 T 12-10-2018 M634_18515 96b533aaedd8200bd0d40923a8899345 268 Gene3D G3DSA:2.40.128.150 86 183 4.9E-71 T 12-10-2018 M634_19950 98c5a1bd76b52d40dd71fd13e3123b31 500 Pfam PF02321 Outer membrane efflux protein 62 273 2.1E-15 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 M634_19950 98c5a1bd76b52d40dd71fd13e3123b31 500 Pfam PF02321 Outer membrane efflux protein 304 483 4.3E-21 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 M634_19950 98c5a1bd76b52d40dd71fd13e3123b31 500 Gene3D G3DSA:1.20.1600.10 53 486 3.0E-107 T 12-10-2018 M634_19950 98c5a1bd76b52d40dd71fd13e3123b31 500 Gene3D G3DSA:2.20.200.10 99 374 3.0E-107 T 12-10-2018 M634_19950 98c5a1bd76b52d40dd71fd13e3123b31 500 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 10 484 2.8E-79 T 12-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 M634_19950 98c5a1bd76b52d40dd71fd13e3123b31 500 SUPERFAMILY SSF56954 3 487 3.53E-89 T 12-10-2018 M634_14190 a509ef616c222a0d0b567903a89e381a 452 Pfam PF14344 Domain of unknown function (DUF4397) 247 369 8.9E-17 T 12-10-2018 IPR025510 Domain of unknown function DUF4397 M634_14190 a509ef616c222a0d0b567903a89e381a 452 Pfam PF14344 Domain of unknown function (DUF4397) 31 153 2.3E-17 T 12-10-2018 IPR025510 Domain of unknown function DUF4397 M634_14190 a509ef616c222a0d0b567903a89e381a 452 Pfam PF14344 Domain of unknown function (DUF4397) 138 227 8.1E-12 T 12-10-2018 IPR025510 Domain of unknown function DUF4397 M634_22650 d73724a5cd05035d814188fa9af42572 706 Pfam PF03477 ATP cone domain 4 89 3.1E-22 T 12-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 M634_22650 d73724a5cd05035d814188fa9af42572 706 Gene3D G3DSA:3.20.70.20 121 687 7.4E-232 T 12-10-2018 M634_22650 d73724a5cd05035d814188fa9af42572 706 SUPERFAMILY SSF51998 121 687 4.27E-193 T 12-10-2018 M634_22650 d73724a5cd05035d814188fa9af42572 706 ProSitePatterns PS00850 Glycine radical domain signature. 676 684 - T 12-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site M634_22650 d73724a5cd05035d814188fa9af42572 706 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 116 705 1.1E-180 T 12-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 M634_22650 d73724a5cd05035d814188fa9af42572 706 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 115 705 5.2E-199 T 12-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 M634_15195 05fd66ca045f300a387e3c8686a56332 307 Gene3D G3DSA:3.10.350.10 34 100 3.2E-12 T 12-10-2018 IPR036779 LysM domain superfamily M634_15195 05fd66ca045f300a387e3c8686a56332 307 SMART SM00257 48 92 1.5E-11 T 12-10-2018 IPR018392 LysM domain M634_15195 05fd66ca045f300a387e3c8686a56332 307 Pfam PF01476 LysM domain 49 91 5.2E-12 T 12-10-2018 IPR018392 LysM domain M634_15195 05fd66ca045f300a387e3c8686a56332 307 Pfam PF01551 Peptidase family M23 208 302 5.7E-31 T 12-10-2018 IPR016047 Peptidase M23 M634_15195 05fd66ca045f300a387e3c8686a56332 307 SUPERFAMILY SSF51261 48 306 2.82E-52 T 12-10-2018 IPR011055 Duplicated hybrid motif M634_15195 05fd66ca045f300a387e3c8686a56332 307 Gene3D G3DSA:2.70.70.10 129 307 9.5E-38 T 12-10-2018 IPR011055 Duplicated hybrid motif M634_24165 020140baac3397c0b5406c8cde4d47b7 369 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 14 221 3.2E-27 T 12-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) M634_24165 020140baac3397c0b5406c8cde4d47b7 369 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 224 347 1.1E-17 T 12-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) M634_24165 020140baac3397c0b5406c8cde4d47b7 369 SUPERFAMILY SSF56935 22 367 8.7E-60 T 12-10-2018 M634_24165 020140baac3397c0b5406c8cde4d47b7 369 Gene3D G3DSA:2.40.160.60 22 369 4.1E-63 T 12-10-2018 M634_23150 292c74621db3e8fb7b9ebbcc58880a81 511 Gene3D G3DSA:3.40.50.2300 11 146 3.5E-13 T 12-10-2018 M634_23150 292c74621db3e8fb7b9ebbcc58880a81 511 SUPERFAMILY SSF48452 198 269 1.34E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_23150 292c74621db3e8fb7b9ebbcc58880a81 511 Pfam PF00072 Response regulator receiver domain 13 130 1.6E-7 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_23150 292c74621db3e8fb7b9ebbcc58880a81 511 SMART SM00448 11 131 0.0027 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_23150 292c74621db3e8fb7b9ebbcc58880a81 511 SUPERFAMILY SSF52172 10 148 1.71E-13 T 12-10-2018 IPR011006 CheY-like superfamily M634_10755 290b8257d5555559062420e59885f13e 363 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 68 269 1.4E-15 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M634_10755 290b8257d5555559062420e59885f13e 363 Gene3D G3DSA:2.40.50.100 68 201 1.8E-77 T 12-10-2018 M634_10755 290b8257d5555559062420e59885f13e 363 Gene3D G3DSA:1.10.287.470 102 161 1.8E-77 T 12-10-2018 M634_10755 290b8257d5555559062420e59885f13e 363 Gene3D G3DSA:2.40.420.20 48 354 1.8E-77 T 12-10-2018 M634_10755 290b8257d5555559062420e59885f13e 363 Gene3D G3DSA:2.40.30.170 54 278 1.8E-77 T 12-10-2018 M634_10755 290b8257d5555559062420e59885f13e 363 SUPERFAMILY SSF111369 60 273 3.79E-25 T 12-10-2018 M634_10755 290b8257d5555559062420e59885f13e 363 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 48 356 9.6E-70 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 M634_14740 497d98f1679f9a1405ad21c930024121 429 SUPERFAMILY SSF51261 144 390 1.46E-71 T 12-10-2018 IPR011055 Duplicated hybrid motif M634_14740 497d98f1679f9a1405ad21c930024121 429 Gene3D G3DSA:3.10.450.350 69 159 7.7E-11 T 12-10-2018 M634_14740 497d98f1679f9a1405ad21c930024121 429 Pfam PF08525 Opacity-associated protein A N-terminal motif 4 31 5.5E-5 T 12-10-2018 IPR013731 Opacity-associated protein A, N-terminal M634_14740 497d98f1679f9a1405ad21c930024121 429 Gene3D G3DSA:3.10.450.350 172 410 2.6E-80 T 12-10-2018 M634_14740 497d98f1679f9a1405ad21c930024121 429 Pfam PF01551 Peptidase family M23 295 389 2.8E-31 T 12-10-2018 IPR016047 Peptidase M23 M634_14740 497d98f1679f9a1405ad21c930024121 429 Gene3D G3DSA:2.70.70.10 266 395 2.6E-80 T 12-10-2018 IPR011055 Duplicated hybrid motif M634_10450 212a2f5881628ef12c2bc95f3d78a332 303 Gene3D G3DSA:1.10.10.10 1 84 1.1E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_10450 212a2f5881628ef12c2bc95f3d78a332 303 SUPERFAMILY SSF46785 4 81 4.19E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_10450 212a2f5881628ef12c2bc95f3d78a332 303 Pfam PF03466 LysR substrate binding domain 94 260 4.1E-13 T 12-10-2018 IPR005119 LysR, substrate-binding M634_10450 212a2f5881628ef12c2bc95f3d78a332 303 Gene3D G3DSA:3.40.190.290 94 299 4.2E-15 T 12-10-2018 M634_10450 212a2f5881628ef12c2bc95f3d78a332 303 SUPERFAMILY SSF53850 94 288 2.17E-12 T 12-10-2018 M634_10450 212a2f5881628ef12c2bc95f3d78a332 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 8.9E-14 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_17740 a40a29edca00bcdcdbb93556de96d264 345 SUPERFAMILY SSF81345 20 342 1.31E-76 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M634_17740 a40a29edca00bcdcdbb93556de96d264 345 Pfam PF01032 FecCD transport family 40 342 1.9E-83 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 M634_17740 a40a29edca00bcdcdbb93556de96d264 345 Gene3D G3DSA:1.10.3470.10 17 345 1.5E-86 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M634_09820 1a19c86edd5e193e309ef68c68b59217 530 Gene3D G3DSA:3.40.50.300 2 281 4.1E-56 T 12-10-2018 M634_09820 1a19c86edd5e193e309ef68c68b59217 530 Pfam PF00005 ABC transporter 337 466 6.0E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_09820 1a19c86edd5e193e309ef68c68b59217 530 SUPERFAMILY SSF52540 333 516 1.62E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_09820 1a19c86edd5e193e309ef68c68b59217 530 SUPERFAMILY SSF52540 7 237 9.02E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_09820 1a19c86edd5e193e309ef68c68b59217 530 SMART SM00382 26 238 1.3E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_09820 1a19c86edd5e193e309ef68c68b59217 530 SMART SM00382 343 511 1.8E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_09820 1a19c86edd5e193e309ef68c68b59217 530 Pfam PF12848 ABC transporter 224 309 2.3E-21 T 12-10-2018 IPR032781 ABC-transporter extension domain M634_09820 1a19c86edd5e193e309ef68c68b59217 530 Gene3D G3DSA:3.40.50.300 282 529 3.7E-50 T 12-10-2018 M634_09820 1a19c86edd5e193e309ef68c68b59217 530 Pfam PF00005 ABC transporter 18 184 1.0E-20 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_08950 e11bb0e5a15bc68ab64288a59bc54240 238 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 9 236 7.8E-53 T 12-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 M634_08950 e11bb0e5a15bc68ab64288a59bc54240 238 Gene3D G3DSA:3.40.50.1360 1 238 7.2E-89 T 12-10-2018 M634_08950 e11bb0e5a15bc68ab64288a59bc54240 238 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 225 1.5E-61 T 12-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 M634_08950 e11bb0e5a15bc68ab64288a59bc54240 238 SUPERFAMILY SSF100950 3 237 2.2E-60 T 12-10-2018 IPR037171 NagB/RpiA transferase-like M634_15075 011752c9aa52b8c1904ab0a7acd93f87 522 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 522 222.258 T 12-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 M634_15075 011752c9aa52b8c1904ab0a7acd93f87 522 Gene3D G3DSA:3.30.590.20 17 522 1.4E-191 T 12-10-2018 M634_15075 011752c9aa52b8c1904ab0a7acd93f87 522 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 8 516 2.8E-208 T 12-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 M634_15075 011752c9aa52b8c1904ab0a7acd93f87 522 Pfam PF04262 Glutamate-cysteine ligase 13 378 8.8E-168 T 12-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 M634_15075 011752c9aa52b8c1904ab0a7acd93f87 522 SUPERFAMILY SSF55931 6 513 1.05E-199 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 M634_23745 9cbac763a23003212892aaa231e0e41b 237 SMART SM00382 32 220 4.9E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_23745 9cbac763a23003212892aaa231e0e41b 237 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_23745 9cbac763a23003212892aaa231e0e41b 237 Gene3D G3DSA:3.40.50.300 1 236 1.6E-72 T 12-10-2018 M634_23745 9cbac763a23003212892aaa231e0e41b 237 Pfam PF00005 ABC transporter 24 172 9.1E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_23745 9cbac763a23003212892aaa231e0e41b 237 SUPERFAMILY SSF52540 3 223 7.19E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_05135 d05574544bb945e73ce56d63d055bf75 187 Pfam PF13505 Outer membrane protein beta-barrel domain 10 187 3.7E-24 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel M634_05135 d05574544bb945e73ce56d63d055bf75 187 Gene3D G3DSA:2.40.160.20 15 187 4.2E-30 T 12-10-2018 M634_05135 d05574544bb945e73ce56d63d055bf75 187 SUPERFAMILY SSF56925 28 187 4.19E-31 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel M634_03440 ead6bbcf03e3b1fe70139ea92a55e7d8 190 Pfam PF00027 Cyclic nucleotide-binding domain 30 112 1.2E-8 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain M634_03440 ead6bbcf03e3b1fe70139ea92a55e7d8 190 Gene3D G3DSA:2.60.120.10 9 140 8.0E-22 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M634_03440 ead6bbcf03e3b1fe70139ea92a55e7d8 190 SUPERFAMILY SSF51206 15 132 1.31E-21 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like M634_00530 ccbcee287c862b3e31e77490dd630ec0 429 Pfam PF01926 50S ribosome-binding GTPase 200 318 2.9E-21 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M634_00530 ccbcee287c862b3e31e77490dd630ec0 429 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 1.9E-28 T 12-10-2018 IPR032305 GTP-binding protein, middle domain M634_00530 ccbcee287c862b3e31e77490dd630ec0 429 Hamap MF_00900 GTPase HflX [hflX]. 27 390 48.195 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 M634_00530 ccbcee287c862b3e31e77490dd630ec0 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 8.9E-10 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M634_00530 ccbcee287c862b3e31e77490dd630ec0 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 8.9E-10 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M634_00530 ccbcee287c862b3e31e77490dd630ec0 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 8.9E-10 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 M634_00530 ccbcee287c862b3e31e77490dd630ec0 429 Gene3D G3DSA:3.40.50.300 197 371 7.3E-43 T 12-10-2018 M634_00530 ccbcee287c862b3e31e77490dd630ec0 429 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 8.1E-31 T 12-10-2018 IPR025121 GTPase HflX, N-terminal M634_00530 ccbcee287c862b3e31e77490dd630ec0 429 SUPERFAMILY SSF52540 197 372 5.03E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_00530 ccbcee287c862b3e31e77490dd630ec0 429 PIRSF PIRSF006809 3 423 4.6E-151 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 M634_00530 ccbcee287c862b3e31e77490dd630ec0 429 SUPERFAMILY SSF54980 364 428 7.91E-19 T 12-10-2018 IPR035647 EF-G domain III/V-like M634_00530 ccbcee287c862b3e31e77490dd630ec0 429 Gene3D G3DSA:3.40.50.11060 18 138 5.1E-37 T 12-10-2018 M634_00530 ccbcee287c862b3e31e77490dd630ec0 429 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 1.6E-156 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 M634_03405 a9404b47b70ea5a99645541fc9be0819 330 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 318 34.701 T 12-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M634_03405 a9404b47b70ea5a99645541fc9be0819 330 SUPERFAMILY SSF47789 252 326 1.44E-25 T 12-10-2018 M634_03405 a9404b47b70ea5a99645541fc9be0819 330 SMART SM00662 23 235 4.9E-104 T 12-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M634_03405 a9404b47b70ea5a99645541fc9be0819 330 Gene3D G3DSA:3.30.1360.10 17 229 9.5E-84 T 12-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M634_03405 a9404b47b70ea5a99645541fc9be0819 330 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 317 5.9E-112 T 12-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M634_03405 a9404b47b70ea5a99645541fc9be0819 330 SUPERFAMILY SSF56553 53 179 2.27E-40 T 12-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M634_03405 a9404b47b70ea5a99645541fc9be0819 330 Gene3D G3DSA:2.170.120.12 53 178 9.5E-84 T 12-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M634_03405 a9404b47b70ea5a99645541fc9be0819 330 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 157 4.2E-24 T 12-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M634_03405 a9404b47b70ea5a99645541fc9be0819 330 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 257 330 2.0E-36 T 12-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M634_03405 a9404b47b70ea5a99645541fc9be0819 330 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 246 309 7.1E-24 T 12-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M634_03405 a9404b47b70ea5a99645541fc9be0819 330 Gene3D G3DSA:1.10.150.20 245 330 1.4E-38 T 12-10-2018 M634_03405 a9404b47b70ea5a99645541fc9be0819 330 SUPERFAMILY SSF55257 7 234 3.53E-30 T 12-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M634_03405 a9404b47b70ea5a99645541fc9be0819 330 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 229 2.5E-23 T 12-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M634_10060 d6fe49c5d901ae6e9640856a9329afe0 160 SUPERFAMILY SSF56925 18 159 9.16E-21 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel M634_10060 d6fe49c5d901ae6e9640856a9329afe0 160 Gene3D G3DSA:2.40.160.20 19 160 1.0E-23 T 12-10-2018 M634_10060 d6fe49c5d901ae6e9640856a9329afe0 160 Pfam PF13505 Outer membrane protein beta-barrel domain 6 159 1.2E-17 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel M634_03015 73961db7760ee80592155a88d4e5bf2f 250 Gene3D G3DSA:2.160.10.10 1 208 4.9E-51 T 12-10-2018 M634_03015 73961db7760ee80592155a88d4e5bf2f 250 SUPERFAMILY SSF51161 2 209 2.04E-37 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily M634_03015 73961db7760ee80592155a88d4e5bf2f 250 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 93 126 1.2E-4 T 12-10-2018 IPR001451 Hexapeptide repeat M634_03015 73961db7760ee80592155a88d4e5bf2f 250 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 46 1.2E-8 T 12-10-2018 IPR001451 Hexapeptide repeat M634_09135 1538b498aa84693bc39b42af76a213f3 94 Pfam PF09059 TyeA 6 86 2.8E-33 T 12-10-2018 IPR015144 Type III secretion system effector delivery regulator TyeA M634_09135 1538b498aa84693bc39b42af76a213f3 94 ProDom PD029314 TYEA PLASMID ACR1 SECRETION CONTROL TARGETING TYPE LSSA VP1666 TARGET 1 75 7.0E-37 T 12-10-2018 IPR015144 Type III secretion system effector delivery regulator TyeA M634_09135 1538b498aa84693bc39b42af76a213f3 94 TIGRFAM TIGR02511 type_III_tyeA: type III secretion effector delivery regulator, TyeA family 3 84 1.8E-25 T 12-10-2018 IPR013351 Type III secretion system effector delivery regulator TyeA-related M634_09135 1538b498aa84693bc39b42af76a213f3 94 Gene3D G3DSA:1.20.1280.80 1 92 2.2E-33 T 12-10-2018 IPR038347 TyeA superfamily M634_09135 1538b498aa84693bc39b42af76a213f3 94 SUPERFAMILY SSF140591 2 92 5.1E-30 T 12-10-2018 M634_16725 4af609f69a6eae6d1c2bf33ffd80b4e2 318 PIRSF PIRSF002849 1 318 5.7E-128 T 12-10-2018 M634_16725 4af609f69a6eae6d1c2bf33ffd80b4e2 318 Gene3D G3DSA:1.10.8.300 199 315 3.5E-39 T 12-10-2018 M634_16725 4af609f69a6eae6d1c2bf33ffd80b4e2 318 Gene3D G3DSA:3.40.50.300 17 183 2.6E-46 T 12-10-2018 M634_16725 4af609f69a6eae6d1c2bf33ffd80b4e2 318 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 36 166 1.1E-62 T 12-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 M634_16725 4af609f69a6eae6d1c2bf33ffd80b4e2 318 SUPERFAMILY SSF52540 6 290 2.22E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_17575 701397d685b703c45e3d68dda5adf92f 305 Pfam PF04018 Domain of unknown function (DUF368) 13 257 3.3E-96 T 12-10-2018 IPR007163 Protein of unknown function DUF368 M634_08085 32e9d5ff06a3fdfdce4e2b9a3948a93e 284 Pfam PF01380 SIS domain 124 252 1.3E-24 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 M634_08085 32e9d5ff06a3fdfdce4e2b9a3948a93e 284 Gene3D G3DSA:3.40.50.10490 94 276 8.7E-39 T 12-10-2018 M634_08085 32e9d5ff06a3fdfdce4e2b9a3948a93e 284 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 1.7E-29 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 M634_08085 32e9d5ff06a3fdfdce4e2b9a3948a93e 284 SUPERFAMILY SSF46689 1 80 1.58E-21 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_08085 32e9d5ff06a3fdfdce4e2b9a3948a93e 284 SUPERFAMILY SSF53697 93 278 3.24E-39 T 12-10-2018 M634_08085 32e9d5ff06a3fdfdce4e2b9a3948a93e 284 Gene3D G3DSA:1.10.10.10 1 79 2.3E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_01925 027b772f8cbf20af5184b09b9cba7602 288 Gene3D G3DSA:3.40.1380.10 61 207 1.1E-110 T 12-10-2018 M634_01925 027b772f8cbf20af5184b09b9cba7602 288 Pfam PF00231 ATP synthase 5 287 1.4E-98 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_01925 027b772f8cbf20af5184b09b9cba7602 288 Gene3D G3DSA:1.10.287.80 6 284 1.1E-110 T 12-10-2018 M634_01925 027b772f8cbf20af5184b09b9cba7602 288 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 288 1.2E-111 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_01925 027b772f8cbf20af5184b09b9cba7602 288 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 274 287 - T 12-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_01925 027b772f8cbf20af5184b09b9cba7602 288 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 8.2E-37 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_01925 027b772f8cbf20af5184b09b9cba7602 288 PRINTS PR00126 ATP synthase gamma subunit signature 266 287 8.2E-37 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_01925 027b772f8cbf20af5184b09b9cba7602 288 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 8.2E-37 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_01925 027b772f8cbf20af5184b09b9cba7602 288 PRINTS PR00126 ATP synthase gamma subunit signature 235 254 8.2E-37 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_01925 027b772f8cbf20af5184b09b9cba7602 288 SUPERFAMILY SSF52943 2 288 3.14E-96 T 12-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_01925 027b772f8cbf20af5184b09b9cba7602 288 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 288 36.835 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 M634_23800 033430f9893271fef0510e8f2eee2dd5 119 Pfam PF00462 Glutaredoxin 43 96 1.5E-11 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 M634_23800 033430f9893271fef0510e8f2eee2dd5 119 Gene3D G3DSA:3.40.30.10 20 118 2.2E-14 T 12-10-2018 M634_23800 033430f9893271fef0510e8f2eee2dd5 119 SUPERFAMILY SSF52833 41 118 3.53E-19 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M634_08390 a7f6b9f948cd89fb7c9e7eca90f5c3fe 216 SUPERFAMILY SSF53335 3 214 6.79E-56 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_08390 a7f6b9f948cd89fb7c9e7eca90f5c3fe 216 Gene3D G3DSA:3.40.50.150 1 216 6.1E-62 T 12-10-2018 M634_08390 a7f6b9f948cd89fb7c9e7eca90f5c3fe 216 PIRSF PIRSF023956 1 216 7.6E-73 T 12-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 M634_08390 a7f6b9f948cd89fb7c9e7eca90f5c3fe 216 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 3 214 1.3E-73 T 12-10-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 M634_08390 a7f6b9f948cd89fb7c9e7eca90f5c3fe 216 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 5 214 4.1E-78 T 12-10-2018 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 M634_08390 a7f6b9f948cd89fb7c9e7eca90f5c3fe 216 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 2 215 35.562 T 12-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 M634_03785 d2496d7ec50f2f6f1c65012689669ce3 360 SUPERFAMILY SSF56796 3 356 9.68E-92 T 12-10-2018 M634_03785 d2496d7ec50f2f6f1c65012689669ce3 360 Gene3D G3DSA:3.40.50.1970 3 159 1.2E-43 T 12-10-2018 M634_03785 d2496d7ec50f2f6f1c65012689669ce3 360 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 348 2.9E-69 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 M634_03785 d2496d7ec50f2f6f1c65012689669ce3 360 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 241 261 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 M634_03785 d2496d7ec50f2f6f1c65012689669ce3 360 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 150 178 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 M634_03785 d2496d7ec50f2f6f1c65012689669ce3 360 PIRSF PIRSF000112 1 359 1.3E-94 T 12-10-2018 IPR016205 Glycerol dehydrogenase GO:0016614|GO:0046872|GO:0055114 KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 M634_03785 d2496d7ec50f2f6f1c65012689669ce3 360 Gene3D G3DSA:1.20.1090.10 160 360 4.0E-80 T 12-10-2018 M634_01080 7757fed13fa230a9ee3c6bd530074762 163 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 3 153 2.5E-55 T 12-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 M634_01080 7757fed13fa230a9ee3c6bd530074762 163 Gene3D G3DSA:1.20.120.1370 1 156 1.5E-52 T 12-10-2018 IPR038309 Rsd/AlgQ superfamily M634_01080 7757fed13fa230a9ee3c6bd530074762 163 PIRSF PIRSF016548 3 163 3.6E-70 T 12-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 M634_20705 fe1c5c333cc4c37f5d7558efa8732e91 249 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 8 248 1.6E-135 T 12-10-2018 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823 M634_20705 fe1c5c333cc4c37f5d7558efa8732e91 249 SUPERFAMILY SSF69572 4 249 4.32E-86 T 12-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 M634_20705 fe1c5c333cc4c37f5d7558efa8732e91 249 Pfam PF00899 ThiF family 12 245 1.4E-64 T 12-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 M634_20705 fe1c5c333cc4c37f5d7558efa8732e91 249 Gene3D G3DSA:3.40.50.720 4 249 4.0E-87 T 12-10-2018 M634_18150 92cdef8dc863b2d60bf6d24e87d29fde 297 Pfam PF01418 Helix-turn-helix domain, rpiR family 17 88 3.2E-18 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 M634_18150 92cdef8dc863b2d60bf6d24e87d29fde 297 Gene3D G3DSA:1.10.10.10 14 90 1.0E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_18150 92cdef8dc863b2d60bf6d24e87d29fde 297 SUPERFAMILY SSF46689 15 91 4.66E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_18150 92cdef8dc863b2d60bf6d24e87d29fde 297 Gene3D G3DSA:3.40.50.10490 111 289 8.0E-39 T 12-10-2018 M634_18150 92cdef8dc863b2d60bf6d24e87d29fde 297 Pfam PF01380 SIS domain 143 271 6.3E-17 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 M634_18150 92cdef8dc863b2d60bf6d24e87d29fde 297 SUPERFAMILY SSF53697 121 286 2.49E-37 T 12-10-2018 M634_13105 949eaec9460a95ca39f15ba4b957f578 72 Gene3D G3DSA:1.20.120.910 3 71 7.3E-17 T 12-10-2018 M634_13105 949eaec9460a95ca39f15ba4b957f578 72 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 38 69 4.0E-8 T 12-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 M634_13105 949eaec9460a95ca39f15ba4b957f578 72 SUPERFAMILY SSF57716 39 70 8.55E-6 T 12-10-2018 M634_13105 949eaec9460a95ca39f15ba4b957f578 72 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 3 68 3.0E-18 T 12-10-2018 IPR012783 Zinc finger, C4 DksA/TraR-type M634_13415 7fc4a36b336ad2d9db81a215acc3abe1 176 Gene3D G3DSA:3.30.1370.110 49 175 2.6E-27 T 12-10-2018 M634_13415 7fc4a36b336ad2d9db81a215acc3abe1 176 Pfam PF01713 Smr domain 97 171 2.0E-17 T 12-10-2018 IPR002625 Smr domain M634_13415 7fc4a36b336ad2d9db81a215acc3abe1 176 SMART SM00463 94 172 1.5E-15 T 12-10-2018 IPR002625 Smr domain M634_13415 7fc4a36b336ad2d9db81a215acc3abe1 176 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 173 39.373 T 12-10-2018 IPR022990 Uncharacterised protein family UPF0115 M634_13415 7fc4a36b336ad2d9db81a215acc3abe1 176 SUPERFAMILY SSF160443 95 171 2.48E-11 T 12-10-2018 IPR036063 Smr domain superfamily M634_18145 e4e3000f7a706974fa18ca7a0cde7138 236 SUPERFAMILY SSF53187 13 213 1.59E-27 T 12-10-2018 M634_18145 e4e3000f7a706974fa18ca7a0cde7138 236 Gene3D G3DSA:3.40.630.10 1 236 3.9E-58 T 12-10-2018 M634_18145 e4e3000f7a706974fa18ca7a0cde7138 236 Pfam PF00246 Zinc carboxypeptidase 42 156 1.2E-9 T 12-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 M634_17470 4cd91422848be128f88238c3c9fcb64c 198 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 156 196 1.5E-5 T 12-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type M634_17470 4cd91422848be128f88238c3c9fcb64c 198 Gene3D G3DSA:1.10.10.60 1 56 3.2E-20 T 12-10-2018 M634_17470 4cd91422848be128f88238c3c9fcb64c 198 Gene3D G3DSA:1.10.357.10 58 198 1.0E-26 T 12-10-2018 M634_17470 4cd91422848be128f88238c3c9fcb64c 198 SUPERFAMILY SSF48498 78 196 1.38E-6 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily M634_17470 4cd91422848be128f88238c3c9fcb64c 198 SUPERFAMILY SSF46689 4 79 9.67E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_17470 4cd91422848be128f88238c3c9fcb64c 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 56 2.2E-15 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M634_17470 4cd91422848be128f88238c3c9fcb64c 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 2.7E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M634_17470 4cd91422848be128f88238c3c9fcb64c 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 2.7E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M634_07235 f3df7b54883201de71d598aa0339694b 125 SUPERFAMILY SSF58104 1 122 1.44E-12 T 12-10-2018 M634_07235 f3df7b54883201de71d598aa0339694b 125 Gene3D G3DSA:1.10.287.950 1 124 1.2E-11 T 12-10-2018 M634_14075 b37485643e54aca09681593b38c57d67 454 SUPERFAMILY SSF161070 10 453 7.06E-119 T 12-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 M634_14075 b37485643e54aca09681593b38c57d67 454 Pfam PF00209 Sodium:neurotransmitter symporter family 155 452 2.5E-26 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 M634_14075 b37485643e54aca09681593b38c57d67 454 Pfam PF00209 Sodium:neurotransmitter symporter family 10 133 1.5E-21 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 M634_14075 b37485643e54aca09681593b38c57d67 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 18 39 1.3E-10 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 M634_14075 b37485643e54aca09681593b38c57d67 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 314 333 1.3E-10 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 M634_14075 b37485643e54aca09681593b38c57d67 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 47 66 1.3E-10 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 M634_23785 935879ca6c9509ff681b081565f083a5 69 Pfam PF00313 'Cold-shock' DNA-binding domain 6 67 2.3E-28 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 M634_23785 935879ca6c9509ff681b081565f083a5 69 SUPERFAMILY SSF50249 4 68 7.07E-24 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_23785 935879ca6c9509ff681b081565f083a5 69 PIRSF PIRSF002599 1 69 3.2E-24 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 M634_23785 935879ca6c9509ff681b081565f083a5 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 12-10-2018 IPR019844 Cold-shock conserved site M634_23785 935879ca6c9509ff681b081565f083a5 69 PRINTS PR00050 Cold shock protein signature 7 22 5.4E-17 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 M634_23785 935879ca6c9509ff681b081565f083a5 69 PRINTS PR00050 Cold shock protein signature 27 36 5.4E-17 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 M634_23785 935879ca6c9509ff681b081565f083a5 69 PRINTS PR00050 Cold shock protein signature 42 60 5.4E-17 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 M634_23785 935879ca6c9509ff681b081565f083a5 69 Gene3D G3DSA:2.40.50.140 4 68 3.0E-28 T 12-10-2018 M634_23785 935879ca6c9509ff681b081565f083a5 69 SMART SM00357 6 69 4.2E-30 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 M634_12520 030e0c45e810428e6b6eda2eb85c24cc 149 SUPERFAMILY SSF52788 1 149 2.09E-48 T 12-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily M634_12520 030e0c45e810428e6b6eda2eb85c24cc 149 SMART SM00226 2 148 1.0E-42 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I M634_12520 030e0c45e810428e6b6eda2eb85c24cc 149 Gene3D G3DSA:3.40.50.2300 1 149 3.7E-58 T 12-10-2018 M634_12520 030e0c45e810428e6b6eda2eb85c24cc 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 8.9E-25 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 M634_12520 030e0c45e810428e6b6eda2eb85c24cc 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 102 115 8.9E-25 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 M634_12520 030e0c45e810428e6b6eda2eb85c24cc 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 8.9E-25 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 M634_12520 030e0c45e810428e6b6eda2eb85c24cc 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 120 135 8.9E-25 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 M634_12520 030e0c45e810428e6b6eda2eb85c24cc 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 8.9E-25 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 M634_12520 030e0c45e810428e6b6eda2eb85c24cc 149 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 144 7.5E-38 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I M634_23525 0b0dbe295255f11bb8870d7edd737b97 226 Pfam PF01575 MaoC like domain 84 201 1.2E-21 T 12-10-2018 IPR002539 MaoC-like dehydratase domain M634_23525 0b0dbe295255f11bb8870d7edd737b97 226 Gene3D G3DSA:3.10.129.10 75 225 6.5E-35 T 12-10-2018 M634_23525 0b0dbe295255f11bb8870d7edd737b97 226 SUPERFAMILY SSF54637 77 221 4.17E-29 T 12-10-2018 IPR029069 HotDog domain superfamily M634_10265 655ea59c08fe93318c31d3f681b50f50 313 Gene3D G3DSA:3.40.50.880 1 301 8.0E-124 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M634_10265 655ea59c08fe93318c31d3f681b50f50 313 PIRSF PIRSF000450 1 309 9.3E-147 T 12-10-2018 IPR033752 MetA family M634_10265 655ea59c08fe93318c31d3f681b50f50 313 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 1.0E-129 T 12-10-2018 M634_10265 655ea59c08fe93318c31d3f681b50f50 313 SUPERFAMILY SSF52317 18 297 6.34E-102 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M634_10265 655ea59c08fe93318c31d3f681b50f50 313 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 301 3.7E-161 T 12-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 M634_10265 655ea59c08fe93318c31d3f681b50f50 313 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 299 41.008 T 12-10-2018 IPR033752 MetA family M634_10265 655ea59c08fe93318c31d3f681b50f50 313 Pfam PF04204 Homoserine O-succinyltransferase 2 299 1.1E-134 T 12-10-2018 IPR033752 MetA family M634_12130 21b2697c65776ff9106b6c8b29e1c8f7 434 SMART SM00388 224 289 8.6E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_12130 21b2697c65776ff9106b6c8b29e1c8f7 434 SUPERFAMILY SSF47384 207 289 1.75E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 M634_12130 21b2697c65776ff9106b6c8b29e1c8f7 434 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 419 1.9E-7 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_12130 21b2697c65776ff9106b6c8b29e1c8f7 434 SUPERFAMILY SSF55874 280 419 2.05E-15 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_12130 21b2697c65776ff9106b6c8b29e1c8f7 434 Pfam PF00512 His Kinase A (phospho-acceptor) domain 226 287 7.5E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 M634_12130 21b2697c65776ff9106b6c8b29e1c8f7 434 SMART SM00387 333 423 2.6E-10 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_12130 21b2697c65776ff9106b6c8b29e1c8f7 434 Gene3D G3DSA:1.10.287.130 174 290 4.9E-20 T 12-10-2018 M634_12130 21b2697c65776ff9106b6c8b29e1c8f7 434 Gene3D G3DSA:3.30.565.10 299 430 8.5E-14 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_21830 1efc1fb36a001be6f13932aa24d94fb4 291 Pfam PF00582 Universal stress protein family 154 286 2.0E-7 T 12-10-2018 IPR006016 UspA M634_21830 1efc1fb36a001be6f13932aa24d94fb4 291 Gene3D G3DSA:3.40.50.12370 7 290 1.8E-23 T 12-10-2018 M634_21830 1efc1fb36a001be6f13932aa24d94fb4 291 SUPERFAMILY SSF52402 153 287 5.94E-10 T 12-10-2018 M634_23495 9da7c2a9746f99657f48df621b71d40c 533 Pfam PF00990 Diguanylate cyclase, GGDEF domain 105 255 3.6E-36 T 12-10-2018 IPR000160 GGDEF domain M634_23495 9da7c2a9746f99657f48df621b71d40c 533 SUPERFAMILY SSF141868 276 523 3.53E-76 T 12-10-2018 IPR035919 EAL domain superfamily M634_23495 9da7c2a9746f99657f48df621b71d40c 533 SMART SM00267 94 260 1.7E-37 T 12-10-2018 IPR000160 GGDEF domain M634_23495 9da7c2a9746f99657f48df621b71d40c 533 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 103 255 5.4E-34 T 12-10-2018 IPR000160 GGDEF domain M634_23495 9da7c2a9746f99657f48df621b71d40c 533 Gene3D G3DSA:3.30.70.270 100 272 2.4E-44 T 12-10-2018 M634_23495 9da7c2a9746f99657f48df621b71d40c 533 Gene3D G3DSA:3.20.20.450 273 532 1.4E-81 T 12-10-2018 IPR035919 EAL domain superfamily M634_23495 9da7c2a9746f99657f48df621b71d40c 533 Pfam PF00563 EAL domain 277 509 1.8E-63 T 12-10-2018 IPR001633 EAL domain M634_23495 9da7c2a9746f99657f48df621b71d40c 533 SMART SM00052 270 515 1.1E-79 T 12-10-2018 IPR001633 EAL domain M634_23495 9da7c2a9746f99657f48df621b71d40c 533 SUPERFAMILY SSF55073 110 255 2.2E-38 T 12-10-2018 IPR029787 Nucleotide cyclase M634_05160 77c2e0d572413d0d961b2d35feb8d023 554 Gene3D G3DSA:3.40.50.300 249 553 2.0E-52 T 12-10-2018 M634_05160 77c2e0d572413d0d961b2d35feb8d023 554 Gene3D G3DSA:3.40.50.300 1 248 2.8E-47 T 12-10-2018 M634_05160 77c2e0d572413d0d961b2d35feb8d023 554 PIRSF PIRSF003128 1 554 4.8E-163 T 12-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 M634_05160 77c2e0d572413d0d961b2d35feb8d023 554 SUPERFAMILY SSF52540 1 513 3.36E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_05160 77c2e0d572413d0d961b2d35feb8d023 554 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 551 5.0E-174 T 12-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 M634_05160 77c2e0d572413d0d961b2d35feb8d023 554 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 507 4.7E-17 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal M634_11790 b1763daa93240aac9f0489abf523ce12 529 SUPERFAMILY SSF47090 206 285 4.0E-12 T 12-10-2018 IPR036365 PGBD-like superfamily M634_11790 b1763daa93240aac9f0489abf523ce12 529 Pfam PF01471 Putative peptidoglycan binding domain 245 276 4.4E-8 T 12-10-2018 IPR002477 Peptidoglycan binding-like M634_11790 b1763daa93240aac9f0489abf523ce12 529 SUPERFAMILY SSF141523 303 464 1.09E-19 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like M634_11790 b1763daa93240aac9f0489abf523ce12 529 Pfam PF03734 L,D-transpeptidase catalytic domain 304 470 5.2E-30 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 M634_14910 809a456f7e2e0f51624d230cea7525b3 161 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 5.4E-47 T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 M634_14910 809a456f7e2e0f51624d230cea7525b3 161 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 M634_14910 809a456f7e2e0f51624d230cea7525b3 161 SUPERFAMILY SSF55083 1 159 1.57E-55 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 M634_14910 809a456f7e2e0f51624d230cea7525b3 161 Gene3D G3DSA:3.30.70.560 1 159 1.3E-60 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 M634_14910 809a456f7e2e0f51624d230cea7525b3 161 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 1.7E-38 T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 M634_02720 9c522d087ccb92496284c48a6ea109e9 275 Gene3D G3DSA:3.40.190.80 162 264 2.7E-26 T 12-10-2018 M634_02720 9c522d087ccb92496284c48a6ea109e9 275 Gene3D G3DSA:3.30.540.10 6 161 4.2E-45 T 12-10-2018 M634_02720 9c522d087ccb92496284c48a6ea109e9 275 Pfam PF00459 Inositol monophosphatase family 7 253 3.3E-51 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 M634_02720 9c522d087ccb92496284c48a6ea109e9 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 65 81 9.0E-6 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 M634_02720 9c522d087ccb92496284c48a6ea109e9 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 89 105 9.0E-6 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 M634_02720 9c522d087ccb92496284c48a6ea109e9 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 43 63 9.0E-6 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 M634_02720 9c522d087ccb92496284c48a6ea109e9 275 SUPERFAMILY SSF56655 6 272 5.24E-77 T 12-10-2018 M634_02720 9c522d087ccb92496284c48a6ea109e9 275 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 10 260 1.2E-105 T 12-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 M634_02720 9c522d087ccb92496284c48a6ea109e9 275 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 10 262 39.174 T 12-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 M634_05420 7f0b62b27b8cd9305cde04143e786717 760 SMART SM00028 254 287 27.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_05420 7f0b62b27b8cd9305cde04143e786717 760 SMART SM00028 88 121 28.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_05420 7f0b62b27b8cd9305cde04143e786717 760 SMART SM00028 294 327 0.054 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_05420 7f0b62b27b8cd9305cde04143e786717 760 SMART SM00028 334 367 14.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_05420 7f0b62b27b8cd9305cde04143e786717 760 SMART SM00028 416 449 420.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_05420 7f0b62b27b8cd9305cde04143e786717 760 Gene3D G3DSA:1.25.40.10 240 495 1.3E-19 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_05420 7f0b62b27b8cd9305cde04143e786717 760 SUPERFAMILY SSF48452 258 456 2.51E-17 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_05420 7f0b62b27b8cd9305cde04143e786717 760 Gene3D G3DSA:1.25.40.10 71 239 2.2E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_05420 7f0b62b27b8cd9305cde04143e786717 760 SUPERFAMILY SSF48452 83 234 7.17E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_20090 8c2bad9a04f02883750f8dc338d12797 236 SUPERFAMILY SSF55681 4 232 9.35E-45 T 12-10-2018 M634_20090 8c2bad9a04f02883750f8dc338d12797 236 Gene3D G3DSA:3.30.930.10 3 236 2.8E-42 T 12-10-2018 M634_08970 db349cc427ecbc8ee97c09c49de6836b 586 Pfam PF01590 GAF domain 76 186 1.2E-8 T 12-10-2018 IPR003018 GAF domain GO:0005515 M634_08970 db349cc427ecbc8ee97c09c49de6836b 586 SUPERFAMILY SSF46689 489 584 1.13E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_08970 db349cc427ecbc8ee97c09c49de6836b 586 Gene3D G3DSA:1.10.8.60 455 529 1.3E-9 T 12-10-2018 M634_08970 db349cc427ecbc8ee97c09c49de6836b 586 SMART SM00382 300 444 1.0E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_08970 db349cc427ecbc8ee97c09c49de6836b 586 Gene3D G3DSA:3.40.50.300 265 452 1.0E-56 T 12-10-2018 M634_08970 db349cc427ecbc8ee97c09c49de6836b 586 Pfam PF02954 Bacterial regulatory protein, Fis family 555 580 9.8E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M634_08970 db349cc427ecbc8ee97c09c49de6836b 586 Gene3D G3DSA:3.30.450.40 4 188 2.0E-45 T 12-10-2018 IPR029016 GAF-like domain superfamily M634_08970 db349cc427ecbc8ee97c09c49de6836b 586 Pfam PF00158 Sigma-54 interaction domain 285 447 1.2E-60 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 M634_08970 db349cc427ecbc8ee97c09c49de6836b 586 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 304 317 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 M634_08970 db349cc427ecbc8ee97c09c49de6836b 586 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 548 565 1.1E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M634_08970 db349cc427ecbc8ee97c09c49de6836b 586 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 565 585 1.1E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M634_08970 db349cc427ecbc8ee97c09c49de6836b 586 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 367 382 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M634_08970 db349cc427ecbc8ee97c09c49de6836b 586 Gene3D G3DSA:1.10.10.60 544 585 1.4E-9 T 12-10-2018 M634_08970 db349cc427ecbc8ee97c09c49de6836b 586 SUPERFAMILY SSF52540 284 511 7.65E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_06880 701fdd7bf5d28c00a5cb37af7125b89c 242 Pfam PF10972 Peptidoglycan-binding protein, CsiV 2 241 1.5E-64 T 12-10-2018 IPR021241 Peptidoglycan-binding protein, CsiV M634_23020 573bb010fceb68d3f55e89ff940cd6d3 174 Gene3D G3DSA:3.40.50.300 1 152 6.0E-18 T 12-10-2018 M634_23020 573bb010fceb68d3f55e89ff940cd6d3 174 SUPERFAMILY SSF52540 2 111 2.43E-17 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_23020 573bb010fceb68d3f55e89ff940cd6d3 174 Pfam PF13671 AAA domain 6 37 3.7E-6 T 12-10-2018 M634_07700 9af22c491775b0f0c633e43a12f5e55b 286 Gene3D G3DSA:1.20.1080.10 27 280 1.5E-94 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 M634_07700 9af22c491775b0f0c633e43a12f5e55b 286 Pfam PF01226 Formate/nitrite transporter 14 275 1.4E-73 T 12-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 M634_07700 9af22c491775b0f0c633e43a12f5e55b 286 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 25 279 4.6E-77 T 12-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 M634_07700 9af22c491775b0f0c633e43a12f5e55b 286 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 14 278 1.4E-112 T 12-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 M634_07700 9af22c491775b0f0c633e43a12f5e55b 286 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 82 91 - T 12-10-2018 IPR024002 Formate/nitrite transporter, conserved site M634_20290 68281c6a2bd826b0cf40e6cf97299ba2 98 Gene3D G3DSA:2.60.40.10 6 98 2.5E-18 T 12-10-2018 IPR013783 Immunoglobulin-like fold M634_20290 68281c6a2bd826b0cf40e6cf97299ba2 98 Pfam PF16561 Glycogen recognition site of AMP-activated protein kinase 24 94 1.9E-6 T 12-10-2018 IPR032640 AMP-activated protein kinase, glycogen-binding domain Reactome: R-HSA-1445148|Reactome: R-HSA-1632852|Reactome: R-HSA-2151209|Reactome: R-HSA-380972|Reactome: R-HSA-5628897|Reactome: R-HSA-6804756 M634_20290 68281c6a2bd826b0cf40e6cf97299ba2 98 SUPERFAMILY SSF81296 11 95 1.82E-15 T 12-10-2018 IPR014756 Immunoglobulin E-set M634_20290 68281c6a2bd826b0cf40e6cf97299ba2 98 SMART SM01065 12 93 2.5E-4 T 12-10-2018 IPR002044 Carbohydrate binding module family 20 GO:2001070 M634_10445 f0db12eef75a0d9747885b87a6879394 355 SUPERFAMILY SSF56935 65 341 3.05E-6 T 12-10-2018 M634_10445 f0db12eef75a0d9747885b87a6879394 355 Pfam PF01103 Surface antigen 144 238 9.2E-6 T 12-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 M634_10445 f0db12eef75a0d9747885b87a6879394 355 Gene3D G3DSA:2.40.160.50 146 354 2.9E-10 T 12-10-2018 M634_20085 d5ea558cb5a428d11f00ba05de5f1775 522 SUPERFAMILY SSF52540 73 359 3.23E-74 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_20085 d5ea558cb5a428d11f00ba05de5f1775 522 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 499 51.094 T 12-10-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 M634_20085 d5ea558cb5a428d11f00ba05de5f1775 522 Pfam PF00271 Helicase conserved C-terminal domain 232 338 2.0E-26 T 12-10-2018 IPR001650 Helicase, C-terminal M634_20085 d5ea558cb5a428d11f00ba05de5f1775 522 Gene3D G3DSA:3.40.50.300 214 417 1.0E-45 T 12-10-2018 M634_20085 d5ea558cb5a428d11f00ba05de5f1775 522 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site M634_20085 d5ea558cb5a428d11f00ba05de5f1775 522 SMART SM00487 20 221 2.4E-63 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M634_20085 d5ea558cb5a428d11f00ba05de5f1775 522 Gene3D G3DSA:3.40.50.300 1 209 2.2E-76 T 12-10-2018 M634_20085 d5ea558cb5a428d11f00ba05de5f1775 522 SMART SM00490 257 338 6.7E-32 T 12-10-2018 IPR001650 Helicase, C-terminal M634_20085 d5ea558cb5a428d11f00ba05de5f1775 522 Pfam PF00270 DEAD/DEAH box helicase 26 194 6.6E-48 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 M634_07350 0dc2f1ad8343692fd19a88081ada4045 565 Gene3D G3DSA:1.10.443.10 368 560 5.9E-17 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 M634_07350 0dc2f1ad8343692fd19a88081ada4045 565 SUPERFAMILY SSF56349 232 554 2.83E-38 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 M634_07350 0dc2f1ad8343692fd19a88081ada4045 565 Pfam PF00589 Phage integrase family 400 534 2.2E-8 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 M634_07350 0dc2f1ad8343692fd19a88081ada4045 565 Gene3D G3DSA:1.10.150.130 228 363 1.9E-10 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal M634_15205 8918ec19b8421038957d7d69e4708c96 258 SUPERFAMILY SSF64167 11 256 1.24E-86 T 12-10-2018 M634_15205 8918ec19b8421038957d7d69e4708c96 258 Pfam PF01975 Survival protein SurE 13 191 2.5E-61 T 12-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 M634_15205 8918ec19b8421038957d7d69e4708c96 258 Gene3D G3DSA:3.40.1210.10 2 258 1.5E-96 T 12-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 M634_15205 8918ec19b8421038957d7d69e4708c96 258 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 11 257 41.073 T 12-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 M634_15205 8918ec19b8421038957d7d69e4708c96 258 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 12 242 1.1E-73 T 12-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 M634_10090 2a5a7fb1180be726e639b3f47e3f94be 209 Pfam PF12800 4Fe-4S binding domain 14 28 0.039 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M634_10090 2a5a7fb1180be726e639b3f47e3f94be 209 Gene3D G3DSA:3.30.70.20 1 198 8.8E-55 T 12-10-2018 M634_10090 2a5a7fb1180be726e639b3f47e3f94be 209 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 6 166 1.4E-83 T 12-10-2018 IPR014297 Dimethylsulphoxide reductase, chain B M634_10090 2a5a7fb1180be726e639b3f47e3f94be 209 Pfam PF13247 4Fe-4S dicluster domain 61 156 2.5E-30 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M634_10090 2a5a7fb1180be726e639b3f47e3f94be 209 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 102 113 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M634_10090 2a5a7fb1180be726e639b3f47e3f94be 209 SUPERFAMILY SSF54862 1 202 7.95E-70 T 12-10-2018 M634_07775 c0dc0f7b0c25f965ab730e9546d38d4c 336 SUPERFAMILY SSF46689 278 332 7.17E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_07775 c0dc0f7b0c25f965ab730e9546d38d4c 336 SUPERFAMILY SSF52540 4 237 1.77E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_07775 c0dc0f7b0c25f965ab730e9546d38d4c 336 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 5 330 4.9E-166 T 12-10-2018 IPR014317 Transcription activator PspF M634_07775 c0dc0f7b0c25f965ab730e9546d38d4c 336 SMART SM00382 25 177 1.1E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_07775 c0dc0f7b0c25f965ab730e9546d38d4c 336 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 91 106 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 M634_07775 c0dc0f7b0c25f965ab730e9546d38d4c 336 Gene3D G3DSA:1.10.10.60 265 333 1.9E-7 T 12-10-2018 M634_07775 c0dc0f7b0c25f965ab730e9546d38d4c 336 Pfam PF00158 Sigma-54 interaction domain 5 167 2.1E-57 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 M634_07775 c0dc0f7b0c25f965ab730e9546d38d4c 336 PRINTS PR00819 CbxX/CfqX superfamily signature 88 107 6.0E-5 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 M634_07775 c0dc0f7b0c25f965ab730e9546d38d4c 336 PRINTS PR00819 CbxX/CfqX superfamily signature 1 7 6.0E-5 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 M634_07775 c0dc0f7b0c25f965ab730e9546d38d4c 336 PRINTS PR00819 CbxX/CfqX superfamily signature 222 234 6.0E-5 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 M634_07775 c0dc0f7b0c25f965ab730e9546d38d4c 336 Gene3D G3DSA:1.10.8.60 177 259 4.8E-26 T 12-10-2018 M634_07775 c0dc0f7b0c25f965ab730e9546d38d4c 336 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 313 333 2.0E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M634_07775 c0dc0f7b0c25f965ab730e9546d38d4c 336 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 296 313 2.0E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M634_07775 c0dc0f7b0c25f965ab730e9546d38d4c 336 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 219 228 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site M634_07775 c0dc0f7b0c25f965ab730e9546d38d4c 336 Pfam PF02954 Bacterial regulatory protein, Fis family 296 324 4.5E-6 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 M634_07775 c0dc0f7b0c25f965ab730e9546d38d4c 336 Gene3D G3DSA:3.40.50.300 1 176 1.2E-57 T 12-10-2018 M634_05415 c04d9868162aa3cd83d428457ec1c01a 521 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 362 519 1.8E-35 T 12-10-2018 IPR000160 GGDEF domain M634_05415 c04d9868162aa3cd83d428457ec1c01a 521 Pfam PF00990 Diguanylate cyclase, GGDEF domain 363 517 1.1E-34 T 12-10-2018 IPR000160 GGDEF domain M634_05415 c04d9868162aa3cd83d428457ec1c01a 521 SUPERFAMILY SSF55073 366 518 2.35E-34 T 12-10-2018 IPR029787 Nucleotide cyclase M634_05415 c04d9868162aa3cd83d428457ec1c01a 521 Gene3D G3DSA:3.30.70.270 351 521 8.7E-40 T 12-10-2018 M634_05415 c04d9868162aa3cd83d428457ec1c01a 521 SMART SM00267 351 521 8.6E-34 T 12-10-2018 IPR000160 GGDEF domain M634_15875 1fa5018afacf5cb0a109c14160d8bbb9 164 Gene3D G3DSA:2.60.450.10 20 157 1.4E-41 T 12-10-2018 M634_15875 1fa5018afacf5cb0a109c14160d8bbb9 164 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 1 160 24.676 T 12-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 M634_15875 1fa5018afacf5cb0a109c14160d8bbb9 164 Pfam PF03968 OstA-like protein 30 141 7.1E-30 T 12-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal M634_15875 1fa5018afacf5cb0a109c14160d8bbb9 164 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 20 160 1.2E-47 T 12-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 M634_01845 d2b52738e678175f030fed2160e43b32 245 SUPERFAMILY SSF52540 1 238 7.32E-76 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_01845 d2b52738e678175f030fed2160e43b32 245 SMART SM00382 26 216 1.1E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_01845 d2b52738e678175f030fed2160e43b32 245 Pfam PF00005 ABC transporter 17 168 2.0E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_01845 d2b52738e678175f030fed2160e43b32 245 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_01845 d2b52738e678175f030fed2160e43b32 245 Gene3D G3DSA:3.40.50.300 1 243 5.6E-77 T 12-10-2018 M634_01845 d2b52738e678175f030fed2160e43b32 245 PIRSF PIRSF039085 1 244 2.7E-105 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 M634_08245 568d193dedee92ce0bee2f9a3b090e78 226 Pfam PF11813 Protein of unknown function (DUF3334) 3 226 1.0E-117 T 12-10-2018 IPR024513 Protein of unknown function DUF3334 M634_08245 568d193dedee92ce0bee2f9a3b090e78 226 Gene3D G3DSA:3.40.1550.10 7 173 1.5E-20 T 12-10-2018 IPR028976 CheC-like superfamily M634_08245 568d193dedee92ce0bee2f9a3b090e78 226 SUPERFAMILY SSF103039 10 173 3.27E-24 T 12-10-2018 IPR028976 CheC-like superfamily M634_12180 fd6db87b7e7664c6c7af41335d742f8c 174 Pfam PF00857 Isochorismatase family 4 159 1.6E-34 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 M634_12180 fd6db87b7e7664c6c7af41335d742f8c 174 Gene3D G3DSA:3.40.50.850 1 174 2.1E-42 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 M634_12180 fd6db87b7e7664c6c7af41335d742f8c 174 SUPERFAMILY SSF52499 2 162 1.44E-48 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 M634_05070 c46f555a4e64441a7b6513b3da4f33de 418 Gene3D G3DSA:3.30.9.10 134 362 4.0E-54 T 12-10-2018 M634_05070 c46f555a4e64441a7b6513b3da4f33de 418 Gene3D G3DSA:3.50.50.60 94 404 4.0E-54 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_05070 c46f555a4e64441a7b6513b3da4f33de 418 Gene3D G3DSA:3.50.50.60 1 73 9.8E-11 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_05070 c46f555a4e64441a7b6513b3da4f33de 418 Pfam PF01266 FAD dependent oxidoreductase 3 397 2.7E-72 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 M634_05070 c46f555a4e64441a7b6513b3da4f33de 418 SUPERFAMILY SSF51905 1 406 5.31E-53 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_05070 c46f555a4e64441a7b6513b3da4f33de 418 SUPERFAMILY SSF54373 270 360 1.29E-17 T 12-10-2018 M634_15460 9c9388cc0d1a49450cb94e434e06567c 231 SUPERFAMILY SSF54060 20 228 8.24E-94 T 12-10-2018 M634_15460 9c9388cc0d1a49450cb94e434e06567c 231 Pfam PF04231 Endonuclease I 33 227 1.4E-46 T 12-10-2018 IPR007346 Endonuclease I GO:0004518 M634_06865 6974776d77cde45939c5ec184cea32bb 179 Gene3D G3DSA:3.40.50.1820 1 179 2.2E-20 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_06865 6974776d77cde45939c5ec184cea32bb 179 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 1.7E-68 T 12-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA M634_06865 6974776d77cde45939c5ec184cea32bb 179 SUPERFAMILY SSF53474 2 176 1.98E-6 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_06865 6974776d77cde45939c5ec184cea32bb 179 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 48.417 T 12-10-2018 IPR022987 Uncharacterised protein family UPF0227 M634_24460 02bf535c7128899561fc3bbc4c833601 104 SUPERFAMILY SSF53901 1 104 1.21E-26 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M634_24460 02bf535c7128899561fc3bbc4c833601 104 Gene3D G3DSA:3.40.47.10 1 104 7.6E-31 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M634_24460 02bf535c7128899561fc3bbc4c833601 104 Pfam PF00108 Thiolase, N-terminal domain 7 104 2.2E-20 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 M634_24460 02bf535c7128899561fc3bbc4c833601 104 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 M634_02805 aa5786e3bf1f603ececde4a6f8a5238f 90 SMART SM01409 8 61 1.9E-16 T 12-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 M634_02805 aa5786e3bf1f603ececde4a6f8a5238f 90 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 1.5E-29 T 12-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M634_02805 aa5786e3bf1f603ececde4a6f8a5238f 90 SUPERFAMILY SSF63562 1 78 5.1E-26 T 12-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 M634_02805 aa5786e3bf1f603ececde4a6f8a5238f 90 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.947 T 12-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 M634_02805 aa5786e3bf1f603ececde4a6f8a5238f 90 Pfam PF01192 RNA polymerase Rpb6 10 60 1.1E-17 T 12-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 M634_02805 aa5786e3bf1f603ececde4a6f8a5238f 90 Gene3D G3DSA:3.90.940.10 1 90 6.2E-30 T 12-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 M634_15045 19aaa7b972ebbb60be8854dfb6662233 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 2.8E-27 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_15045 19aaa7b972ebbb60be8854dfb6662233 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 23.052 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_15045 19aaa7b972ebbb60be8854dfb6662233 82 Pfam PF00886 Ribosomal protein S16 8 68 1.2E-23 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_15045 19aaa7b972ebbb60be8854dfb6662233 82 Gene3D G3DSA:3.30.1320.10 1 82 1.6E-31 T 12-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_15045 19aaa7b972ebbb60be8854dfb6662233 82 SUPERFAMILY SSF54565 1 76 5.89E-28 T 12-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_15045 19aaa7b972ebbb60be8854dfb6662233 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 12-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_18865 aa67437d10c88ee325eb7dabf91b89ed 134 Gene3D G3DSA:3.30.420.270 61 129 3.9E-11 T 12-10-2018 M634_18865 aa67437d10c88ee325eb7dabf91b89ed 134 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 132 2.6E-28 T 12-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 M634_19675 5761a233913aca9494cbdfc3e153fe40 129 SUPERFAMILY SSF54593 1 128 4.03E-23 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M634_19675 5761a233913aca9494cbdfc3e153fe40 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 127 1.2E-9 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain M634_19675 5761a233913aca9494cbdfc3e153fe40 129 Gene3D G3DSA:3.10.180.10 1 129 4.1E-30 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M634_14155 c29c9a5ee453659f098bee235384177e 102 Gene3D G3DSA:3.30.300.90 1 89 3.0E-34 T 12-10-2018 M634_14155 c29c9a5ee453659f098bee235384177e 102 PIRSF PIRSF003113 1 99 9.3E-37 T 12-10-2018 IPR002634 BolA protein M634_14155 c29c9a5ee453659f098bee235384177e 102 SUPERFAMILY SSF82657 1 89 1.07E-31 T 12-10-2018 IPR036065 BolA-like superfamily M634_14155 c29c9a5ee453659f098bee235384177e 102 Pfam PF01722 BolA-like protein 10 83 1.5E-29 T 12-10-2018 IPR002634 BolA protein M634_08130 5f9f502791b1d59c2713a4ea3092255a 421 Pfam PF06097 Bacterial protein of unknown function (DUF945) 5 410 4.2E-39 T 12-10-2018 IPR010352 Protein of unknown function DUF945 M634_04200 233c259090a50aa0c8673e4177d25569 485 SUPERFAMILY SSF51984 23 109 6.02E-29 T 12-10-2018 M634_04200 233c259090a50aa0c8673e4177d25569 485 SUPERFAMILY SSF53623 108 322 9.81E-73 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 M634_04200 233c259090a50aa0c8673e4177d25569 485 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 25 473 8.1E-188 T 12-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 M634_04200 233c259090a50aa0c8673e4177d25569 485 Pfam PF02875 Mur ligase family, glutamate ligase domain 329 417 3.5E-21 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 M634_04200 233c259090a50aa0c8673e4177d25569 485 Gene3D G3DSA:3.40.1190.10 111 325 1.9E-84 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 M634_04200 233c259090a50aa0c8673e4177d25569 485 SUPERFAMILY SSF53244 326 474 1.48E-48 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 M634_04200 233c259090a50aa0c8673e4177d25569 485 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 22 479 43.857 T 12-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 M634_04200 233c259090a50aa0c8673e4177d25569 485 Pfam PF08245 Mur ligase middle domain 127 307 2.0E-29 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 M634_04200 233c259090a50aa0c8673e4177d25569 485 Pfam PF01225 Mur ligase family, catalytic domain 25 121 4.1E-28 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 M634_04200 233c259090a50aa0c8673e4177d25569 485 Gene3D G3DSA:3.40.50.720 23 110 8.9E-34 T 12-10-2018 M634_04200 233c259090a50aa0c8673e4177d25569 485 Gene3D G3DSA:3.90.190.20 326 482 9.8E-50 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 M634_17590 a69ab96f97635e5e87a2caa3e375d935 153 Gene3D G3DSA:2.60.40.1890 33 148 1.3E-36 T 12-10-2018 IPR036182 Copper chaperone PCuAC superfamily M634_17590 a69ab96f97635e5e87a2caa3e375d935 153 SUPERFAMILY SSF110087 5 145 1.14E-43 T 12-10-2018 IPR036182 Copper chaperone PCuAC superfamily M634_17590 a69ab96f97635e5e87a2caa3e375d935 153 Pfam PF04314 Copper chaperone PCu(A)C 31 135 1.3E-35 T 12-10-2018 IPR007410 Copper chaperone PCuAC M634_09660 4cc30ebc8d52d8531b656c84478db7b2 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 251 1.5E-18 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_09660 4cc30ebc8d52d8531b656c84478db7b2 256 Gene3D G3DSA:1.10.3720.10 4 256 2.1E-47 T 12-10-2018 IPR035906 MetI-like superfamily M634_09660 4cc30ebc8d52d8531b656c84478db7b2 256 SUPERFAMILY SSF161098 4 254 4.67E-55 T 12-10-2018 IPR035906 MetI-like superfamily M634_02000 20b4059329b940165db8733b5abcc8bf 292 SMART SM00563 85 227 2.5E-19 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 M634_02000 20b4059329b940165db8733b5abcc8bf 292 SUPERFAMILY SSF69593 52 289 1.83E-26 T 12-10-2018 M634_02000 20b4059329b940165db8733b5abcc8bf 292 Pfam PF01553 Acyltransferase 72 226 2.5E-16 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 M634_00205 6ffdba2debfc527604d0c738c96220dd 172 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 12-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 M634_00205 6ffdba2debfc527604d0c738c96220dd 172 Pfam PF01202 Shikimate kinase 13 169 1.5E-57 T 12-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 M634_00205 6ffdba2debfc527604d0c738c96220dd 172 PRINTS PR01100 Shikimate kinase family signature 7 22 3.3E-29 T 12-10-2018 M634_00205 6ffdba2debfc527604d0c738c96220dd 172 PRINTS PR01100 Shikimate kinase family signature 98 115 3.3E-29 T 12-10-2018 M634_00205 6ffdba2debfc527604d0c738c96220dd 172 PRINTS PR01100 Shikimate kinase family signature 77 86 3.3E-29 T 12-10-2018 M634_00205 6ffdba2debfc527604d0c738c96220dd 172 PRINTS PR01100 Shikimate kinase family signature 31 44 3.3E-29 T 12-10-2018 M634_00205 6ffdba2debfc527604d0c738c96220dd 172 PRINTS PR01100 Shikimate kinase family signature 59 67 3.3E-29 T 12-10-2018 M634_00205 6ffdba2debfc527604d0c738c96220dd 172 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 30.116 T 12-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 M634_00205 6ffdba2debfc527604d0c738c96220dd 172 Gene3D G3DSA:3.40.50.300 1 172 2.2E-58 T 12-10-2018 M634_00205 6ffdba2debfc527604d0c738c96220dd 172 SUPERFAMILY SSF52540 4 169 6.92E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_06990 b9b4c696bda6d26d8f47d9cc28fd906f 256 SMART SM00382 31 229 1.2E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_06990 b9b4c696bda6d26d8f47d9cc28fd906f 256 SUPERFAMILY SSF52540 7 251 2.6E-74 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_06990 b9b4c696bda6d26d8f47d9cc28fd906f 256 Pfam PF00005 ABC transporter 22 181 1.0E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_06990 b9b4c696bda6d26d8f47d9cc28fd906f 256 PIRSF PIRSF039085 3 256 2.4E-116 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 M634_06990 b9b4c696bda6d26d8f47d9cc28fd906f 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_06990 b9b4c696bda6d26d8f47d9cc28fd906f 256 Gene3D G3DSA:3.40.50.300 4 255 4.8E-74 T 12-10-2018 M634_05345 04a73b3c1300dc0899811bbf0cbfcff7 168 PIRSF PIRSF006162 6 167 2.6E-56 T 12-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 M634_05345 04a73b3c1300dc0899811bbf0cbfcff7 168 Pfam PF04608 Phosphatidylglycerophosphatase A 15 159 6.2E-54 T 12-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 M634_05345 04a73b3c1300dc0899811bbf0cbfcff7 168 SUPERFAMILY SSF101307 9 161 7.32E-50 T 12-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 M634_20735 7f8f447739aed5a80d90aceb59f153c4 467 Pfam PF00654 Voltage gated chloride channel 87 435 1.0E-94 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 M634_20735 7f8f447739aed5a80d90aceb59f153c4 467 Hamap MF_01128 H(+)/Cl(-) exchange transporter ClcA [clcA]. 1 467 54.388 T 12-10-2018 IPR023861 Chloride channel, ClcA GO:0005887|GO:0006821|GO:0015108 M634_20735 7f8f447739aed5a80d90aceb59f153c4 467 Gene3D G3DSA:1.10.3080.10 29 467 6.4E-142 T 12-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 M634_20735 7f8f447739aed5a80d90aceb59f153c4 467 SUPERFAMILY SSF81340 25 451 1.57E-113 T 12-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 M634_20735 7f8f447739aed5a80d90aceb59f153c4 467 PRINTS PR00762 Chloride channel signature 181 200 3.6E-28 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 M634_20735 7f8f447739aed5a80d90aceb59f153c4 467 PRINTS PR00762 Chloride channel signature 403 422 3.6E-28 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 M634_20735 7f8f447739aed5a80d90aceb59f153c4 467 PRINTS PR00762 Chloride channel signature 350 370 3.6E-28 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 M634_20735 7f8f447739aed5a80d90aceb59f153c4 467 PRINTS PR00762 Chloride channel signature 385 401 3.6E-28 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 M634_20735 7f8f447739aed5a80d90aceb59f153c4 467 PRINTS PR00762 Chloride channel signature 100 117 3.6E-28 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 M634_22135 c7cb569c017977f06d33eeb7d8ae86be 582 Pfam PF01268 Formate--tetrahydrofolate ligase 3 581 1.1E-238 T 12-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 M634_22135 c7cb569c017977f06d33eeb7d8ae86be 582 Gene3D G3DSA:3.10.410.10 469 558 1.3E-29 T 12-10-2018 M634_22135 c7cb569c017977f06d33eeb7d8ae86be 582 Gene3D G3DSA:3.30.1510.10 129 264 1.9E-186 T 12-10-2018 M634_22135 c7cb569c017977f06d33eeb7d8ae86be 582 Gene3D G3DSA:3.40.50.300 4 454 1.9E-186 T 12-10-2018 M634_22135 c7cb569c017977f06d33eeb7d8ae86be 582 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 345 356 - T 12-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 M634_22135 c7cb569c017977f06d33eeb7d8ae86be 582 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 582 42.293 T 12-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 M634_22135 c7cb569c017977f06d33eeb7d8ae86be 582 SUPERFAMILY SSF52540 4 580 2.39E-214 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_22135 c7cb569c017977f06d33eeb7d8ae86be 582 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 103 113 - T 12-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 M634_03830 aec0ea42887b813e505069d00a0c488b 582 Pfam PF13444 Acetyltransferase (GNAT) domain 330 431 5.5E-23 T 12-10-2018 M634_03830 aec0ea42887b813e505069d00a0c488b 582 SUPERFAMILY SSF69593 49 248 3.27E-8 T 12-10-2018 M634_03830 aec0ea42887b813e505069d00a0c488b 582 Gene3D G3DSA:3.40.630.30 312 457 1.0E-7 T 12-10-2018 M634_03830 aec0ea42887b813e505069d00a0c488b 582 SMART SM00563 75 199 0.0023 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 M634_03830 aec0ea42887b813e505069d00a0c488b 582 SUPERFAMILY SSF55729 313 459 1.06E-22 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_20080 a4af7a12f3bfe76cca4478a01e4bcb0e 959 Gene3D G3DSA:1.50.10.10 279 587 8.7E-28 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 M634_20080 a4af7a12f3bfe76cca4478a01e4bcb0e 959 Pfam PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain 364 509 1.7E-6 T 12-10-2018 IPR035396 Alpha-L-rhamnosidase, six-hairpin glycosidase domain M634_20080 a4af7a12f3bfe76cca4478a01e4bcb0e 959 SUPERFAMILY SSF48208 237 680 5.88E-37 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 M634_16705 6535ed1e3b10b031a6703d5d8581d2d4 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 174 190 4.8E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_16705 6535ed1e3b10b031a6703d5d8581d2d4 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 174 4.8E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_16705 6535ed1e3b10b031a6703d5d8581d2d4 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 190 202 4.8E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_16705 6535ed1e3b10b031a6703d5d8581d2d4 218 Gene3D G3DSA:3.40.50.2300 11 148 8.8E-26 T 12-10-2018 M634_16705 6535ed1e3b10b031a6703d5d8581d2d4 218 SUPERFAMILY SSF46894 153 216 6.12E-21 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M634_16705 6535ed1e3b10b031a6703d5d8581d2d4 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 159 214 6.2E-22 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_16705 6535ed1e3b10b031a6703d5d8581d2d4 218 SMART SM00421 157 214 3.5E-24 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_16705 6535ed1e3b10b031a6703d5d8581d2d4 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 174 201 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_16705 6535ed1e3b10b031a6703d5d8581d2d4 218 Gene3D G3DSA:1.10.10.10 150 218 1.1E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_09270 a32fffd4c50818fa7dac9b6a8115517b 226 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 6 226 34.685 T 12-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 M634_09270 a32fffd4c50818fa7dac9b6a8115517b 226 Pfam PF13394 4Fe-4S single cluster domain 27 134 1.7E-11 T 12-10-2018 M634_09270 a32fffd4c50818fa7dac9b6a8115517b 226 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 12 225 1.8E-111 T 12-10-2018 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 M634_09270 a32fffd4c50818fa7dac9b6a8115517b 226 PIRSF PIRSF000370 4 226 1.5E-71 T 12-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 M634_09270 a32fffd4c50818fa7dac9b6a8115517b 226 Gene3D G3DSA:3.20.20.70 5 226 1.0E-52 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_09270 a32fffd4c50818fa7dac9b6a8115517b 226 SUPERFAMILY SSF102114 31 125 9.68E-7 T 12-10-2018 M634_21355 da66cc91a938195e028f82d5c2115592 545 Gene3D G3DSA:3.40.1350.10 465 541 4.6E-10 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 M634_21355 da66cc91a938195e028f82d5c2115592 545 SMART SM00990 434 536 7.6E-23 T 12-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 M634_21355 da66cc91a938195e028f82d5c2115592 545 Pfam PF08774 VRR-NUC domain 430 535 1.5E-25 T 12-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 M634_14125 481204e63331af68281f8b1c4f02f019 198 PIRSF PIRSF006102 1 198 4.9E-66 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 M634_14125 481204e63331af68281f8b1c4f02f019 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 197 5.6E-108 T 12-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 M634_14125 481204e63331af68281f8b1c4f02f019 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 1.4E-59 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 M634_14125 481204e63331af68281f8b1c4f02f019 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 29.927 T 12-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 M634_04890 becdfad9054859a54f7b330687cfebee 171 SUPERFAMILY SSF46565 1 72 1.83E-16 T 12-10-2018 IPR036869 Chaperone J-domain superfamily M634_04890 becdfad9054859a54f7b330687cfebee 171 Gene3D G3DSA:1.20.1280.20 80 171 2.1E-28 T 12-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 M634_04890 becdfad9054859a54f7b330687cfebee 171 Pfam PF00226 DnaJ domain 2 70 1.2E-6 T 12-10-2018 IPR001623 DnaJ domain M634_04890 becdfad9054859a54f7b330687cfebee 171 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 170 25.004 T 12-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 M634_04890 becdfad9054859a54f7b330687cfebee 171 Pfam PF07743 HSCB C-terminal oligomerisation domain 87 163 4.8E-19 T 12-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 M634_04890 becdfad9054859a54f7b330687cfebee 171 SUPERFAMILY SSF47144 78 170 7.06E-25 T 12-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 M634_04890 becdfad9054859a54f7b330687cfebee 171 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 169 4.4E-41 T 12-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 M634_04890 becdfad9054859a54f7b330687cfebee 171 SMART SM00271 1 66 4.2E-8 T 12-10-2018 IPR001623 DnaJ domain M634_04890 becdfad9054859a54f7b330687cfebee 171 Gene3D G3DSA:1.10.287.110 1 79 1.7E-22 T 12-10-2018 IPR036869 Chaperone J-domain superfamily M634_23580 34c1511989dffbbad79988c66df8e77c 279 Pfam PF00491 Arginase family 133 214 1.5E-5 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 M634_23580 34c1511989dffbbad79988c66df8e77c 279 Gene3D G3DSA:3.40.800.10 69 218 3.4E-9 T 12-10-2018 M634_23580 34c1511989dffbbad79988c66df8e77c 279 SUPERFAMILY SSF52768 32 250 3.06E-22 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily M634_17435 8be38c0337a5d548ea8f86079456c4af 373 Gene3D G3DSA:3.10.560.10 51 337 4.3E-118 T 12-10-2018 M634_17435 8be38c0337a5d548ea8f86079456c4af 373 Pfam PF10531 SLBB domain 253 302 2.0E-6 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M634_17435 8be38c0337a5d548ea8f86079456c4af 373 Pfam PF10531 SLBB domain 171 215 1.9E-10 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 M634_17435 8be38c0337a5d548ea8f86079456c4af 373 Gene3D G3DSA:3.10.560.10 63 251 4.3E-118 T 12-10-2018 M634_17435 8be38c0337a5d548ea8f86079456c4af 373 Pfam PF02563 Polysaccharide biosynthesis/export protein 79 162 6.3E-26 T 12-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 M634_17435 8be38c0337a5d548ea8f86079456c4af 373 Gene3D G3DSA:1.20.5.70 340 373 3.8E-19 T 12-10-2018 M634_17435 8be38c0337a5d548ea8f86079456c4af 373 Gene3D G3DSA:3.30.1950.10 85 166 4.3E-118 T 12-10-2018 M634_22935 99b074f9b25ce7f57e4c2dabbbd5730b 243 Pfam PF03591 AzlC protein 32 171 2.0E-34 T 12-10-2018 IPR011606 Branched-chain amino acid transport, permease M634_05960 5cef2448e92803417a3f4397cd74a868 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 M634_05960 5cef2448e92803417a3f4397cd74a868 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 2.8E-50 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 M634_05960 5cef2448e92803417a3f4397cd74a868 169 SUPERFAMILY SSF51261 18 166 3.31E-55 T 12-10-2018 IPR011055 Duplicated hybrid motif M634_05960 5cef2448e92803417a3f4397cd74a868 169 Gene3D G3DSA:2.70.70.10 9 169 6.2E-62 T 12-10-2018 IPR011055 Duplicated hybrid motif M634_05960 5cef2448e92803417a3f4397cd74a868 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 3.1E-49 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 M634_16515 e84407962357ca8a7ea92213f530d203 351 Gene3D G3DSA:3.40.50.2000 158 331 1.2E-57 T 12-10-2018 M634_16515 e84407962357ca8a7ea92213f530d203 351 Pfam PF13439 Glycosyltransferase Family 4 66 162 1.5E-11 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 M634_16515 e84407962357ca8a7ea92213f530d203 351 Gene3D G3DSA:3.40.50.2000 45 336 1.2E-57 T 12-10-2018 M634_16515 e84407962357ca8a7ea92213f530d203 351 Pfam PF00534 Glycosyl transferases group 1 179 323 2.2E-34 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 M634_16515 e84407962357ca8a7ea92213f530d203 351 SUPERFAMILY SSF53756 2 348 1.45E-68 T 12-10-2018 M634_21595 78864701dc8d07dbf945af50e411d246 197 Pfam PF16964 Putative tight adherence pilin protein F 9 181 4.4E-25 T 12-10-2018 IPR031582 Putative tight adherence pilin protein F M634_03650 bf2ec124f27049cf9fb95fcf4ac62c38 268 Gene3D G3DSA:3.60.21.10 1 268 8.5E-78 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like M634_03650 bf2ec124f27049cf9fb95fcf4ac62c38 268 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 266 3.8E-118 T 12-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 M634_03650 bf2ec124f27049cf9fb95fcf4ac62c38 268 Pfam PF00149 Calcineurin-like phosphoesterase 4 143 2.1E-13 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 M634_03650 bf2ec124f27049cf9fb95fcf4ac62c38 268 PIRSF PIRSF000903 1 268 1.3E-121 T 12-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 M634_03650 bf2ec124f27049cf9fb95fcf4ac62c38 268 SUPERFAMILY SSF56300 3 252 2.22E-58 T 12-10-2018 M634_03650 bf2ec124f27049cf9fb95fcf4ac62c38 268 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 268 46.779 T 12-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 M634_12275 60dd6c7f448db6d79bbb2cb7433a0132 350 Gene3D G3DSA:1.10.760.10 36 161 2.4E-36 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_12275 60dd6c7f448db6d79bbb2cb7433a0132 350 SUPERFAMILY SSF46626 54 164 9.23E-27 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_12275 60dd6c7f448db6d79bbb2cb7433a0132 350 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 221 301 6.9E-9 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_12275 60dd6c7f448db6d79bbb2cb7433a0132 350 Gene3D G3DSA:1.10.760.10 208 325 7.1E-37 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_12275 60dd6c7f448db6d79bbb2cb7433a0132 350 SUPERFAMILY SSF46626 208 312 2.76E-19 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_13780 652bd6ab7cf018a6576df259e3318a4a 81 Pfam PF01206 Sulfurtransferase TusA 6 75 1.7E-8 T 12-10-2018 IPR001455 TusA-like domain M634_13780 652bd6ab7cf018a6576df259e3318a4a 81 Gene3D G3DSA:3.30.110.40 1 77 4.1E-5 T 12-10-2018 IPR036868 TusA-like domain superfamily M634_13780 652bd6ab7cf018a6576df259e3318a4a 81 SUPERFAMILY SSF64307 4 72 3.4E-7 T 12-10-2018 IPR036868 TusA-like domain superfamily M634_05445 6147f9921031dff5849e0d9909b6628e 225 Gene3D G3DSA:1.10.3720.10 12 225 5.2E-51 T 12-10-2018 IPR035906 MetI-like superfamily M634_05445 6147f9921031dff5849e0d9909b6628e 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 223 8.7E-24 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_05445 6147f9921031dff5849e0d9909b6628e 225 SUPERFAMILY SSF161098 15 210 4.84E-47 T 12-10-2018 IPR035906 MetI-like superfamily M634_06450 4cea407a07792f6a38eb8ee5296cc37a 148 Gene3D G3DSA:3.10.129.10 9 143 1.9E-24 T 12-10-2018 M634_06450 4cea407a07792f6a38eb8ee5296cc37a 148 SUPERFAMILY SSF54637 10 143 2.19E-30 T 12-10-2018 IPR029069 HotDog domain superfamily M634_06450 4cea407a07792f6a38eb8ee5296cc37a 148 Pfam PF13279 Thioesterase-like superfamily 19 124 2.5E-12 T 12-10-2018 M634_23000 6bc7923cbd1f4bfff548deba6af74bf4 374 Pfam PF07690 Major Facilitator Superfamily 19 339 9.9E-41 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M634_23000 6bc7923cbd1f4bfff548deba6af74bf4 374 Gene3D G3DSA:1.20.1720.10 7 372 1.9E-70 T 12-10-2018 M634_23000 6bc7923cbd1f4bfff548deba6af74bf4 374 PRINTS PR01035 Tetracycline resistance protein signature 127 149 1.8E-7 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 M634_23000 6bc7923cbd1f4bfff548deba6af74bf4 374 PRINTS PR01035 Tetracycline resistance protein signature 4 20 1.8E-7 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 M634_23000 6bc7923cbd1f4bfff548deba6af74bf4 374 PRINTS PR01035 Tetracycline resistance protein signature 294 314 1.8E-7 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 M634_23000 6bc7923cbd1f4bfff548deba6af74bf4 374 SUPERFAMILY SSF103473 7 363 1.29E-48 T 12-10-2018 IPR036259 MFS transporter superfamily M634_18885 6e36daf189dcae37396ccc230fefbec9 179 PIRSF PIRSF014995 8 179 6.7E-71 T 12-10-2018 IPR014469 Protein of unknown function DUF2271 M634_18885 6e36daf189dcae37396ccc230fefbec9 179 Gene3D G3DSA:2.60.40.4070 94 149 5.3E-9 T 12-10-2018 M634_18885 6e36daf189dcae37396ccc230fefbec9 179 Pfam PF10029 Predicted periplasmic protein (DUF2271) 39 169 2.5E-46 T 12-10-2018 IPR014469 Protein of unknown function DUF2271 M634_05170 1078241dc5e82d3a5f482c987455f67e 294 Gene3D G3DSA:2.60.200.30 129 266 1.9E-94 T 12-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 M634_05170 1078241dc5e82d3a5f482c987455f67e 294 SUPERFAMILY SSF111331 8 290 4.45E-94 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily M634_05170 1078241dc5e82d3a5f482c987455f67e 294 Pfam PF01513 ATP-NAD kinase 8 273 6.2E-72 T 12-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 M634_05170 1078241dc5e82d3a5f482c987455f67e 294 Hamap MF_00361 NAD kinase [nadK]. 6 289 34.571 T 12-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 M634_05170 1078241dc5e82d3a5f482c987455f67e 294 Gene3D G3DSA:3.40.50.10330 23 289 1.9E-94 T 12-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 M634_10280 690ce5344f1ec48e8b65bbe44895c57e 719 Pfam PF00990 Diguanylate cyclase, GGDEF domain 276 436 2.5E-29 T 12-10-2018 IPR000160 GGDEF domain M634_10280 690ce5344f1ec48e8b65bbe44895c57e 719 SUPERFAMILY SSF55073 281 444 2.59E-33 T 12-10-2018 IPR029787 Nucleotide cyclase M634_10280 690ce5344f1ec48e8b65bbe44895c57e 719 SUPERFAMILY SSF141868 466 706 6.41E-83 T 12-10-2018 IPR035919 EAL domain superfamily M634_10280 690ce5344f1ec48e8b65bbe44895c57e 719 Gene3D G3DSA:3.20.20.450 454 710 3.4E-91 T 12-10-2018 IPR035919 EAL domain superfamily M634_10280 690ce5344f1ec48e8b65bbe44895c57e 719 SMART SM00052 452 699 1.8E-105 T 12-10-2018 IPR001633 EAL domain M634_10280 690ce5344f1ec48e8b65bbe44895c57e 719 Pfam PF00563 EAL domain 458 694 2.5E-71 T 12-10-2018 IPR001633 EAL domain M634_10280 690ce5344f1ec48e8b65bbe44895c57e 719 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 273 441 3.6E-28 T 12-10-2018 IPR000160 GGDEF domain M634_10280 690ce5344f1ec48e8b65bbe44895c57e 719 SMART SM00267 265 442 1.9E-28 T 12-10-2018 IPR000160 GGDEF domain M634_10280 690ce5344f1ec48e8b65bbe44895c57e 719 Gene3D G3DSA:1.20.1480.50 179 272 1.1E-6 T 12-10-2018 M634_10280 690ce5344f1ec48e8b65bbe44895c57e 719 Gene3D G3DSA:3.30.70.270 273 453 8.9E-42 T 12-10-2018 M634_10280 690ce5344f1ec48e8b65bbe44895c57e 719 SMART SM00304 219 270 0.0012 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_19085 c9c12d4dd12da0c660e1ba634cf8841c 402 Pfam PF07670 Nucleoside recognition 90 185 3.1E-8 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 M634_19085 c9c12d4dd12da0c660e1ba634cf8841c 402 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 399 4.8E-141 T 12-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 M634_19085 c9c12d4dd12da0c660e1ba634cf8841c 402 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 399 1.2E-72 T 12-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 M634_19085 c9c12d4dd12da0c660e1ba634cf8841c 402 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 5.4E-24 T 12-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 M634_07660 4d5614345d60b6b28699cdbd47a24997 164 Gene3D G3DSA:2.40.100.10 1 164 6.2E-67 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily M634_07660 4d5614345d60b6b28699cdbd47a24997 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 160 6.0E-49 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 M634_07660 4d5614345d60b6b28699cdbd47a24997 164 SUPERFAMILY SSF50891 1 162 2.78E-59 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily M634_07660 4d5614345d60b6b28699cdbd47a24997 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 12-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 M634_07660 4d5614345d60b6b28699cdbd47a24997 164 PIRSF PIRSF001467 1 163 4.5E-29 T 12-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 M634_07660 4d5614345d60b6b28699cdbd47a24997 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 5.9E-12 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 M634_07660 4d5614345d60b6b28699cdbd47a24997 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 5.9E-12 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 M634_07660 4d5614345d60b6b28699cdbd47a24997 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 5.9E-12 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 M634_08925 364e1452c718fbc319aea94cb3899a46 471 Pfam PF02321 Outer membrane efflux protein 28 243 2.0E-25 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 M634_08925 364e1452c718fbc319aea94cb3899a46 471 Pfam PF02321 Outer membrane efflux protein 265 446 1.6E-24 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 M634_08925 364e1452c718fbc319aea94cb3899a46 471 SUPERFAMILY SSF56954 9 446 1.14E-67 T 12-10-2018 M634_08925 364e1452c718fbc319aea94cb3899a46 471 Gene3D G3DSA:1.20.1600.10 23 459 2.6E-64 T 12-10-2018 M634_19425 9b18e2dd150c23292dcc79dedb031e1b 291 SUPERFAMILY SSF46785 3 82 2.0E-9 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_19425 9b18e2dd150c23292dcc79dedb031e1b 291 Gene3D G3DSA:1.10.10.10 1 84 1.5E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_19425 9b18e2dd150c23292dcc79dedb031e1b 291 Gene3D G3DSA:3.40.190.10 168 259 3.8E-13 T 12-10-2018 M634_19425 9b18e2dd150c23292dcc79dedb031e1b 291 SUPERFAMILY SSF53850 87 286 1.56E-16 T 12-10-2018 M634_19425 9b18e2dd150c23292dcc79dedb031e1b 291 Gene3D G3DSA:3.40.190.10 87 283 3.8E-13 T 12-10-2018 M634_19425 9b18e2dd150c23292dcc79dedb031e1b 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 63 6.8E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_19425 9b18e2dd150c23292dcc79dedb031e1b 291 Pfam PF03466 LysR substrate binding domain 92 286 1.5E-10 T 12-10-2018 IPR005119 LysR, substrate-binding M634_22765 c671a062a5f6b00b20d354e55ee3e330 386 SUPERFAMILY SSF103473 18 376 5.62E-34 T 12-10-2018 IPR036259 MFS transporter superfamily M634_22765 c671a062a5f6b00b20d354e55ee3e330 386 Gene3D G3DSA:1.20.1250.20 13 194 4.4E-17 T 12-10-2018 M634_22765 c671a062a5f6b00b20d354e55ee3e330 386 Gene3D G3DSA:1.20.1250.20 202 383 1.5E-9 T 12-10-2018 M634_22765 c671a062a5f6b00b20d354e55ee3e330 386 Pfam PF07690 Major Facilitator Superfamily 19 343 1.9E-23 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M634_23615 7a29f9c3a3d9812680a212d826e8a4a9 407 SUPERFAMILY SSF53686 10 395 5.63E-132 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme M634_23615 7a29f9c3a3d9812680a212d826e8a4a9 407 PIRSF PIRSF001413 1 403 2.4E-172 T 12-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 M634_23615 7a29f9c3a3d9812680a212d826e8a4a9 407 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 61 384 2.8E-41 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme M634_23615 7a29f9c3a3d9812680a212d826e8a4a9 407 Gene3D G3DSA:3.40.50.1100 17 212 1.9E-166 T 12-10-2018 M634_23615 7a29f9c3a3d9812680a212d826e8a4a9 407 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 87 101 - T 12-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 M634_23615 7a29f9c3a3d9812680a212d826e8a4a9 407 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 14 395 1.6E-163 T 12-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 M634_23615 7a29f9c3a3d9812680a212d826e8a4a9 407 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 9 397 48.184 T 12-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 M634_23615 7a29f9c3a3d9812680a212d826e8a4a9 407 Gene3D G3DSA:3.40.50.1100 61 390 1.9E-166 T 12-10-2018 M634_19100 530388594a6ac103e170b5f955b1872f 314 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 40 53 7.2E-13 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M634_19100 530388594a6ac103e170b5f955b1872f 314 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 85 99 7.2E-13 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M634_19100 530388594a6ac103e170b5f955b1872f 314 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 101 119 7.2E-13 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M634_19100 530388594a6ac103e170b5f955b1872f 314 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 182 193 7.2E-13 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M634_19100 530388594a6ac103e170b5f955b1872f 314 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 149 162 7.2E-13 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M634_19100 530388594a6ac103e170b5f955b1872f 314 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 237 243 7.2E-13 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M634_19100 530388594a6ac103e170b5f955b1872f 314 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 45 241 1.5E-13 T 12-10-2018 IPR000477 Reverse transcriptase domain M634_19100 530388594a6ac103e170b5f955b1872f 314 SUPERFAMILY SSF56672 42 236 3.11E-5 T 12-10-2018 M634_16775 c83c965317fc662c0d35128ab7058e56 273 Gene3D G3DSA:3.40.190.10 99 233 3.6E-82 T 12-10-2018 M634_16775 c83c965317fc662c0d35128ab7058e56 273 Gene3D G3DSA:3.40.190.10 30 270 3.6E-82 T 12-10-2018 M634_16775 c83c965317fc662c0d35128ab7058e56 273 Pfam PF12849 PBP superfamily domain 23 258 1.8E-39 T 12-10-2018 IPR024370 PBP domain M634_16775 c83c965317fc662c0d35128ab7058e56 273 SUPERFAMILY SSF53850 16 272 4.43E-72 T 12-10-2018 M634_16775 c83c965317fc662c0d35128ab7058e56 273 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 20 271 1.1E-75 T 12-10-2018 IPR011862 Phosphate binding protein GO:0042301 M634_05850 bc3a8416e282c0056a40de3d69707249 143 Pfam PF02169 LPP20 lipoprotein 20 118 1.2E-8 T 12-10-2018 IPR024952 Lipoprotein LPP20-like M634_05850 bc3a8416e282c0056a40de3d69707249 143 PIRSF PIRSF028687 1 143 6.2E-58 T 12-10-2018 IPR007293 Flagellar protein FlgP M634_19440 4af56d23ad203909fd30919f3d8d2a66 456 Pfam PF03315 Serine dehydratase beta chain 3 152 2.5E-53 T 12-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 M634_19440 4af56d23ad203909fd30919f3d8d2a66 456 Gene3D G3DSA:3.30.1330.90 10 157 3.7E-50 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 M634_19440 4af56d23ad203909fd30919f3d8d2a66 456 SUPERFAMILY SSF143548 16 155 1.07E-43 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 M634_19440 4af56d23ad203909fd30919f3d8d2a66 456 Pfam PF03313 Serine dehydratase alpha chain 183 447 2.0E-95 T 12-10-2018 IPR005130 Serine dehydratase-like, alpha subunit M634_19440 4af56d23ad203909fd30919f3d8d2a66 456 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 448 2.1E-200 T 12-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 M634_15015 d18d582556db9787637bebc77eac370c 248 Gene3D G3DSA:1.10.3900.10 14 180 8.8E-90 T 12-10-2018 M634_15015 d18d582556db9787637bebc77eac370c 248 Pfam PF07072 Cell division protein 20 226 3.5E-76 T 12-10-2018 IPR009777 Cell division protein ZapD M634_15015 d18d582556db9787637bebc77eac370c 248 Hamap MF_01092 Cell division protein ZapD [zapD]. 5 247 32.839 T 12-10-2018 IPR009777 Cell division protein ZapD M634_15015 d18d582556db9787637bebc77eac370c 248 SUPERFAMILY SSF160950 3 247 4.45E-94 T 12-10-2018 IPR036268 ZapD domain superfamily M634_15015 d18d582556db9787637bebc77eac370c 248 Gene3D G3DSA:2.60.440.10 8 247 8.8E-90 T 12-10-2018 IPR027462 Z ring-associated protein D, C-terminal M634_13025 22fc6fc518b5ce00573f6ea2ed2ef920 649 Pfam PF01757 Acyltransferase family 4 311 6.2E-27 T 12-10-2018 IPR002656 Acyltransferase 3 GO:0016747 M634_23545 528d4da4be5bd3e2878f0d37c947c06f 789 Gene3D G3DSA:3.30.1120.10 505 597 4.8E-20 T 12-10-2018 M634_23545 528d4da4be5bd3e2878f0d37c947c06f 789 Pfam PF00884 Sulfatase 63 475 3.2E-80 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 M634_23545 528d4da4be5bd3e2878f0d37c947c06f 789 SUPERFAMILY SSF53649 62 588 2.76E-124 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 M634_23545 528d4da4be5bd3e2878f0d37c947c06f 789 Gene3D G3DSA:3.40.720.10 60 504 9.3E-109 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 M634_12455 641f69531866fa113c5f965959f5dc50 272 Gene3D G3DSA:3.20.10.10 113 272 4.0E-52 T 12-10-2018 M634_12455 641f69531866fa113c5f965959f5dc50 272 Gene3D G3DSA:3.30.470.10 1 106 2.8E-25 T 12-10-2018 M634_12455 641f69531866fa113c5f965959f5dc50 272 Pfam PF01063 Amino-transferase class IV 24 247 3.5E-46 T 12-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 M634_12455 641f69531866fa113c5f965959f5dc50 272 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 267 7.7E-108 T 12-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 M634_12455 641f69531866fa113c5f965959f5dc50 272 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 12-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 M634_12455 641f69531866fa113c5f965959f5dc50 272 SUPERFAMILY SSF56752 1 267 3.92E-69 T 12-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 M634_19310 cc6cbd91f8d43c03bc530e28a9e41995 677 Gene3D G3DSA:3.40.50.200 144 545 2.4E-158 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 M634_19310 cc6cbd91f8d43c03bc530e28a9e41995 677 Pfam PF02225 PA domain 373 465 2.6E-7 T 12-10-2018 IPR003137 PA domain M634_19310 cc6cbd91f8d43c03bc530e28a9e41995 677 Pfam PF00082 Subtilase family 146 333 4.8E-28 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 M634_19310 cc6cbd91f8d43c03bc530e28a9e41995 677 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 488 498 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site M634_19310 cc6cbd91f8d43c03bc530e28a9e41995 677 PRINTS PR00723 Subtilisin serine protease family (S8) signature 142 161 6.7E-16 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related M634_19310 cc6cbd91f8d43c03bc530e28a9e41995 677 PRINTS PR00723 Subtilisin serine protease family (S8) signature 487 503 6.7E-16 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related M634_19310 cc6cbd91f8d43c03bc530e28a9e41995 677 PRINTS PR00723 Subtilisin serine protease family (S8) signature 182 195 6.7E-16 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related M634_19310 cc6cbd91f8d43c03bc530e28a9e41995 677 SUPERFAMILY SSF52743 123 546 2.72E-104 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 M634_19310 cc6cbd91f8d43c03bc530e28a9e41995 677 Pfam PF00082 Subtilase family 477 538 9.4E-14 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 M634_19310 cc6cbd91f8d43c03bc530e28a9e41995 677 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 186 196 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site M634_19310 cc6cbd91f8d43c03bc530e28a9e41995 677 Gene3D G3DSA:2.60.120.260 561 677 1.3E-13 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily M634_19310 cc6cbd91f8d43c03bc530e28a9e41995 677 Gene3D G3DSA:3.50.30.30 335 480 2.4E-158 T 12-10-2018 M634_19310 cc6cbd91f8d43c03bc530e28a9e41995 677 SUPERFAMILY SSF49785 567 676 3.1E-22 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily M634_19310 cc6cbd91f8d43c03bc530e28a9e41995 677 Pfam PF01483 Proprotein convertase P-domain 597 676 4.7E-22 T 12-10-2018 IPR002884 P domain GO:0004252|GO:0006508 M634_00325 9926671780bf2d4cf6522b5b08e7709a 62 Gene3D G3DSA:1.10.10.1100 1 57 8.0E-19 T 12-10-2018 M634_00325 9926671780bf2d4cf6522b5b08e7709a 62 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 52 1.8E-13 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain M634_16080 e9530ed76ca6a976f127ee9bbcaf2e41 176 Hamap MF_00984 Single-stranded DNA-binding protein. 6 118 39.834 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 M634_16080 e9530ed76ca6a976f127ee9bbcaf2e41 176 PIRSF PIRSF002070 2 175 6.1E-38 T 12-10-2018 M634_16080 e9530ed76ca6a976f127ee9bbcaf2e41 176 Pfam PF00436 Single-strand binding protein family 6 106 6.4E-44 T 12-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 M634_16080 e9530ed76ca6a976f127ee9bbcaf2e41 176 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 176 1.8E-63 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 M634_16080 e9530ed76ca6a976f127ee9bbcaf2e41 176 Gene3D G3DSA:2.40.50.140 2 144 1.8E-51 T 12-10-2018 M634_16080 e9530ed76ca6a976f127ee9bbcaf2e41 176 SUPERFAMILY SSF50249 4 176 1.27E-64 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_10385 6f266b906895785c205590f70b7d3cd1 425 Gene3D G3DSA:3.50.50.60 29 380 1.7E-70 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_10385 6f266b906895785c205590f70b7d3cd1 425 Pfam PF01266 FAD dependent oxidoreductase 29 379 1.8E-55 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 M634_10385 6f266b906895785c205590f70b7d3cd1 425 SUPERFAMILY SSF51905 28 409 1.25E-43 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_10385 6f266b906895785c205590f70b7d3cd1 425 Gene3D G3DSA:3.30.9.10 122 342 1.7E-70 T 12-10-2018 M634_15805 004d4ddec7bae879dface7b0890fbcbb 309 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 3.0E-33 T 12-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 M634_15805 004d4ddec7bae879dface7b0890fbcbb 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 9.7E-38 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 M634_15805 004d4ddec7bae879dface7b0890fbcbb 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 9.7E-38 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 M634_15805 004d4ddec7bae879dface7b0890fbcbb 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 9.7E-38 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 M634_15805 004d4ddec7bae879dface7b0890fbcbb 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 9.7E-38 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 M634_15805 004d4ddec7bae879dface7b0890fbcbb 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 9.7E-38 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 M634_15805 004d4ddec7bae879dface7b0890fbcbb 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 9.7E-38 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 M634_15805 004d4ddec7bae879dface7b0890fbcbb 309 Gene3D G3DSA:3.40.50.1370 8 304 1.3E-122 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 M634_15805 004d4ddec7bae879dface7b0890fbcbb 309 SUPERFAMILY SSF53671 4 307 1.7E-102 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 M634_15805 004d4ddec7bae879dface7b0890fbcbb 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 5.3E-27 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 M634_15805 004d4ddec7bae879dface7b0890fbcbb 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 5.3E-27 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 M634_15805 004d4ddec7bae879dface7b0890fbcbb 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 5.3E-27 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 M634_15805 004d4ddec7bae879dface7b0890fbcbb 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 5.3E-27 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 M634_15805 004d4ddec7bae879dface7b0890fbcbb 309 Gene3D G3DSA:3.40.50.1370 135 292 1.3E-122 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 M634_15805 004d4ddec7bae879dface7b0890fbcbb 309 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 1.9E-45 T 12-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 M634_15805 004d4ddec7bae879dface7b0890fbcbb 309 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.956 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 M634_15805 004d4ddec7bae879dface7b0890fbcbb 309 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 1.4E-118 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 M634_15805 004d4ddec7bae879dface7b0890fbcbb 309 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 M634_19895 bcfcf8e1d461937667aedc963099cbff 261 Gene3D G3DSA:1.10.3720.10 4 255 5.7E-38 T 12-10-2018 IPR035906 MetI-like superfamily M634_19895 bcfcf8e1d461937667aedc963099cbff 261 SUPERFAMILY SSF161098 12 258 1.03E-43 T 12-10-2018 IPR035906 MetI-like superfamily M634_19895 bcfcf8e1d461937667aedc963099cbff 261 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 260 2.8E-16 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_17875 8611beda3f3c3e9bb69e08143759e97f 185 PIRSF PIRSF000239 1 185 1.8E-53 T 12-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 M634_17875 8611beda3f3c3e9bb69e08143759e97f 185 Gene3D G3DSA:3.40.30.10 1 184 4.5E-63 T 12-10-2018 M634_17875 8611beda3f3c3e9bb69e08143759e97f 185 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 185 1.0E-104 T 12-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 M634_17875 8611beda3f3c3e9bb69e08143759e97f 185 Pfam PF00578 AhpC/TSA family 5 131 2.9E-35 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 M634_17875 8611beda3f3c3e9bb69e08143759e97f 185 SUPERFAMILY SSF52833 2 184 1.48E-56 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M634_17875 8611beda3f3c3e9bb69e08143759e97f 185 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 154 179 7.9E-7 T 12-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 M634_21795 873d13cbbdd2969c0c16c96a2e4a5a3d 156 SMART SM00953 15 143 9.1E-15 T 12-10-2018 IPR014914 RES domain M634_21795 873d13cbbdd2969c0c16c96a2e4a5a3d 156 Pfam PF08808 RES domain 2 151 1.2E-25 T 12-10-2018 IPR014914 RES domain M634_16630 5186e64834a36701483d6f7ed74e6ae4 217 Pfam PF02254 TrkA-N domain 5 119 1.2E-23 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 M634_16630 5186e64834a36701483d6f7ed74e6ae4 217 SUPERFAMILY SSF51735 3 133 9.63E-33 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_16630 5186e64834a36701483d6f7ed74e6ae4 217 Gene3D G3DSA:3.40.50.720 1 137 2.6E-32 T 12-10-2018 M634_16630 5186e64834a36701483d6f7ed74e6ae4 217 SUPERFAMILY SSF116726 134 213 4.32E-10 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 M634_16630 5186e64834a36701483d6f7ed74e6ae4 217 Gene3D G3DSA:3.30.70.1450 138 213 4.2E-9 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 M634_23250 c18ea4d5401a3724357672c6fb103aa3 429 ProSitePatterns PS00123 Alkaline phosphatase active site. 77 85 - T 12-10-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 M634_23250 c18ea4d5401a3724357672c6fb103aa3 429 SMART SM00098 24 426 5.8E-106 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 M634_23250 c18ea4d5401a3724357672c6fb103aa3 429 Gene3D G3DSA:3.40.720.10 27 421 3.4E-142 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 M634_23250 c18ea4d5401a3724357672c6fb103aa3 429 Pfam PF00245 Alkaline phosphatase 24 424 2.3E-101 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 M634_23250 c18ea4d5401a3724357672c6fb103aa3 429 SUPERFAMILY SSF53649 13 428 1.19E-115 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 M634_23250 c18ea4d5401a3724357672c6fb103aa3 429 PRINTS PR00113 Alkaline phosphatase signature 228 257 1.8E-38 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 M634_23250 c18ea4d5401a3724357672c6fb103aa3 429 PRINTS PR00113 Alkaline phosphatase signature 164 174 1.8E-38 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 M634_23250 c18ea4d5401a3724357672c6fb103aa3 429 PRINTS PR00113 Alkaline phosphatase signature 77 92 1.8E-38 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 M634_23250 c18ea4d5401a3724357672c6fb103aa3 429 PRINTS PR00113 Alkaline phosphatase signature 23 43 1.8E-38 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 M634_23250 c18ea4d5401a3724357672c6fb103aa3 429 PRINTS PR00113 Alkaline phosphatase signature 114 134 1.8E-38 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 M634_23250 c18ea4d5401a3724357672c6fb103aa3 429 Gene3D G3DSA:1.10.60.40 304 390 3.4E-142 T 12-10-2018 M634_21015 c0649e89fd53ac01d21701880b8b3285 261 SMART SM00244 19 176 1.8E-64 T 12-10-2018 IPR001107 Band 7 domain M634_21015 c0649e89fd53ac01d21701880b8b3285 261 Pfam PF01145 SPFH domain / Band 7 family 24 192 6.6E-36 T 12-10-2018 IPR001107 Band 7 domain M634_21015 c0649e89fd53ac01d21701880b8b3285 261 Gene3D G3DSA:3.30.479.30 47 178 3.4E-49 T 12-10-2018 M634_21015 c0649e89fd53ac01d21701880b8b3285 261 SUPERFAMILY SSF117892 50 183 2.22E-43 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily M634_21015 c0649e89fd53ac01d21701880b8b3285 261 PRINTS PR00721 Stomatin signature 108 125 9.4E-64 T 12-10-2018 IPR001972 Stomatin family GO:0016020 M634_21015 c0649e89fd53ac01d21701880b8b3285 261 PRINTS PR00721 Stomatin signature 152 170 9.4E-64 T 12-10-2018 IPR001972 Stomatin family GO:0016020 M634_21015 c0649e89fd53ac01d21701880b8b3285 261 PRINTS PR00721 Stomatin signature 171 192 9.4E-64 T 12-10-2018 IPR001972 Stomatin family GO:0016020 M634_21015 c0649e89fd53ac01d21701880b8b3285 261 PRINTS PR00721 Stomatin signature 73 94 9.4E-64 T 12-10-2018 IPR001972 Stomatin family GO:0016020 M634_21015 c0649e89fd53ac01d21701880b8b3285 261 PRINTS PR00721 Stomatin signature 196 219 9.4E-64 T 12-10-2018 IPR001972 Stomatin family GO:0016020 M634_21015 c0649e89fd53ac01d21701880b8b3285 261 PRINTS PR00721 Stomatin signature 26 48 9.4E-64 T 12-10-2018 IPR001972 Stomatin family GO:0016020 M634_21015 c0649e89fd53ac01d21701880b8b3285 261 PRINTS PR00721 Stomatin signature 128 151 9.4E-64 T 12-10-2018 IPR001972 Stomatin family GO:0016020 M634_21145 211ab45f28e8b54cd6ec9dbbee080c7c 243 Pfam PF01048 Phosphorylase superfamily 17 199 5.3E-34 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 M634_21145 211ab45f28e8b54cd6ec9dbbee080c7c 243 SUPERFAMILY SSF53167 4 220 3.27E-66 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 M634_21145 211ab45f28e8b54cd6ec9dbbee080c7c 243 Gene3D G3DSA:3.40.50.1580 1 243 1.7E-73 T 12-10-2018 M634_01840 122864f015b9f9e1968da1fa4ef83d3d 223 Gene3D G3DSA:1.10.3720.10 1 222 1.1E-52 T 12-10-2018 IPR035906 MetI-like superfamily M634_01840 122864f015b9f9e1968da1fa4ef83d3d 223 SUPERFAMILY SSF161098 13 203 2.75E-43 T 12-10-2018 IPR035906 MetI-like superfamily M634_01840 122864f015b9f9e1968da1fa4ef83d3d 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 112 1.5E-24 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 M634_01840 122864f015b9f9e1968da1fa4ef83d3d 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 217 2.3E-17 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_03425 50852329795bb22c8dfd923d56394c44 199 Gene3D G3DSA:3.10.450.350 103 193 1.1E-14 T 12-10-2018 M634_03425 50852329795bb22c8dfd923d56394c44 199 Pfam PF04225 Opacity-associated protein A LysM-like domain 115 199 4.3E-39 T 12-10-2018 IPR007340 Opacity-associated protein A M634_03425 50852329795bb22c8dfd923d56394c44 199 Pfam PF08525 Opacity-associated protein A N-terminal motif 45 71 3.7E-7 T 12-10-2018 IPR013731 Opacity-associated protein A, N-terminal M634_17060 d5e0c0ba92e5d46aea5c66c8413c997a 309 Gene3D G3DSA:1.10.10.10 9 95 8.8E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_17060 d5e0c0ba92e5d46aea5c66c8413c997a 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 2.4E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_17060 d5e0c0ba92e5d46aea5c66c8413c997a 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 2.4E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_17060 d5e0c0ba92e5d46aea5c66c8413c997a 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 2.4E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_17060 d5e0c0ba92e5d46aea5c66c8413c997a 309 Gene3D G3DSA:3.40.190.10 169 270 1.0E-57 T 12-10-2018 M634_17060 d5e0c0ba92e5d46aea5c66c8413c997a 309 Gene3D G3DSA:3.40.190.10 98 298 1.0E-57 T 12-10-2018 M634_17060 d5e0c0ba92e5d46aea5c66c8413c997a 309 SUPERFAMILY SSF46785 10 116 8.11E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_17060 d5e0c0ba92e5d46aea5c66c8413c997a 309 SUPERFAMILY SSF53850 95 301 1.99E-37 T 12-10-2018 M634_17060 d5e0c0ba92e5d46aea5c66c8413c997a 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 3.8E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_17060 d5e0c0ba92e5d46aea5c66c8413c997a 309 Pfam PF03466 LysR substrate binding domain 94 301 5.9E-38 T 12-10-2018 IPR005119 LysR, substrate-binding M634_04780 9e0715e60c89ddc7bfb63c52f446f2ba 557 SUPERFAMILY SSF161098 283 538 1.96E-35 T 12-10-2018 IPR035906 MetI-like superfamily M634_04780 9e0715e60c89ddc7bfb63c52f446f2ba 557 Gene3D G3DSA:1.10.3720.10 286 550 1.3E-29 T 12-10-2018 IPR035906 MetI-like superfamily M634_04780 9e0715e60c89ddc7bfb63c52f446f2ba 557 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 288 548 4.1E-76 T 12-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 M634_04780 9e0715e60c89ddc7bfb63c52f446f2ba 557 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 324 476 1.5E-17 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_23350 c67feb7840736d137ea0514dd764b3ba 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 111 1.2E-16 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 M634_23350 c67feb7840736d137ea0514dd764b3ba 229 Gene3D G3DSA:1.10.3720.10 2 218 5.2E-47 T 12-10-2018 IPR035906 MetI-like superfamily M634_23350 c67feb7840736d137ea0514dd764b3ba 229 SUPERFAMILY SSF161098 10 202 3.92E-38 T 12-10-2018 IPR035906 MetI-like superfamily M634_23350 c67feb7840736d137ea0514dd764b3ba 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 216 8.8E-22 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_13460 b71ce7ad9c29243a9e9abf534c3e5322 419 Gene3D G3DSA:2.40.160.60 27 419 5.5E-110 T 12-10-2018 M634_13460 b71ce7ad9c29243a9e9abf534c3e5322 419 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 18 419 5.2E-113 T 12-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) M634_13460 b71ce7ad9c29243a9e9abf534c3e5322 419 SUPERFAMILY SSF56935 27 419 1.47E-87 T 12-10-2018 M634_19555 4acc9dd5bfc98444155ebf3c25f2d770 339 Pfam PF01070 FMN-dependent dehydrogenase 16 106 6.0E-11 T 12-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 M634_19555 4acc9dd5bfc98444155ebf3c25f2d770 339 Pfam PF01070 FMN-dependent dehydrogenase 168 335 5.0E-18 T 12-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 M634_19555 4acc9dd5bfc98444155ebf3c25f2d770 339 SMART SM01240 26 339 0.0014 T 12-10-2018 M634_19555 4acc9dd5bfc98444155ebf3c25f2d770 339 Gene3D G3DSA:3.20.20.70 3 339 1.3E-118 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_19555 4acc9dd5bfc98444155ebf3c25f2d770 339 TIGRFAM TIGR02151 IPP_isom_2: isopentenyl-diphosphate delta-isomerase, type 2 6 337 9.3E-116 T 12-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 M634_19555 4acc9dd5bfc98444155ebf3c25f2d770 339 SUPERFAMILY SSF51395 26 338 1.51E-77 T 12-10-2018 M634_19555 4acc9dd5bfc98444155ebf3c25f2d770 339 Hamap MF_00354 Isopentenyl-diphosphate delta-isomerase [fni]. 4 338 38.296 T 12-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 M634_19555 4acc9dd5bfc98444155ebf3c25f2d770 339 PIRSF PIRSF003314 1 339 6.8E-119 T 12-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 M634_16655 fd5b545544fb3fbab79c9707e6d35523 261 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_16655 fd5b545544fb3fbab79c9707e6d35523 261 SMART SM00382 26 214 1.2E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_16655 fd5b545544fb3fbab79c9707e6d35523 261 Gene3D G3DSA:3.40.50.300 1 255 1.6E-60 T 12-10-2018 M634_16655 fd5b545544fb3fbab79c9707e6d35523 261 Pfam PF00005 ABC transporter 22 166 3.6E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_16655 fd5b545544fb3fbab79c9707e6d35523 261 SUPERFAMILY SSF52540 4 222 3.06E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_16600 1a2fc2de3cb71b30d2af73f42b5dc05b 410 SUPERFAMILY SSF51182 19 396 1.96E-104 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily M634_16600 1a2fc2de3cb71b30d2af73f42b5dc05b 410 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 21 402 1.7E-89 T 12-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M634_16600 1a2fc2de3cb71b30d2af73f42b5dc05b 410 Pfam PF01238 Phosphomannose isomerase type I 23 378 1.2E-87 T 12-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M634_16600 1a2fc2de3cb71b30d2af73f42b5dc05b 410 Gene3D G3DSA:2.60.120.10 322 403 1.5E-130 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M634_16600 1a2fc2de3cb71b30d2af73f42b5dc05b 410 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 145 153 - T 12-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M634_16600 1a2fc2de3cb71b30d2af73f42b5dc05b 410 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 276 301 - T 12-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M634_16600 1a2fc2de3cb71b30d2af73f42b5dc05b 410 Gene3D G3DSA:1.10.441.10 169 321 1.5E-130 T 12-10-2018 M634_16600 1a2fc2de3cb71b30d2af73f42b5dc05b 410 PRINTS PR00714 Phosphomannose isomerase type I signature 24 42 4.5E-69 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M634_16600 1a2fc2de3cb71b30d2af73f42b5dc05b 410 PRINTS PR00714 Phosphomannose isomerase type I signature 295 314 4.5E-69 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M634_16600 1a2fc2de3cb71b30d2af73f42b5dc05b 410 PRINTS PR00714 Phosphomannose isomerase type I signature 276 295 4.5E-69 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M634_16600 1a2fc2de3cb71b30d2af73f42b5dc05b 410 PRINTS PR00714 Phosphomannose isomerase type I signature 52 67 4.5E-69 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M634_16600 1a2fc2de3cb71b30d2af73f42b5dc05b 410 PRINTS PR00714 Phosphomannose isomerase type I signature 145 168 4.5E-69 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M634_16600 1a2fc2de3cb71b30d2af73f42b5dc05b 410 PRINTS PR00714 Phosphomannose isomerase type I signature 100 121 4.5E-69 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M634_16600 1a2fc2de3cb71b30d2af73f42b5dc05b 410 PRINTS PR00714 Phosphomannose isomerase type I signature 241 256 4.5E-69 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M634_16600 1a2fc2de3cb71b30d2af73f42b5dc05b 410 PRINTS PR00714 Phosphomannose isomerase type I signature 257 276 4.5E-69 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M634_16600 1a2fc2de3cb71b30d2af73f42b5dc05b 410 Gene3D G3DSA:2.60.120.10 26 296 1.5E-130 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M634_16600 1a2fc2de3cb71b30d2af73f42b5dc05b 410 PIRSF PIRSF001480 18 410 1.1E-100 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 M634_11960 1c5ad154e551b0417cb7307ad64f078d 787 Gene3D G3DSA:2.40.50.590 6 153 2.7E-41 T 12-10-2018 M634_11960 1c5ad154e551b0417cb7307ad64f078d 787 Gene3D G3DSA:1.10.132.60 643 787 8.4E-61 T 12-10-2018 M634_11960 1c5ad154e551b0417cb7307ad64f078d 787 Gene3D G3DSA:3.30.70.2250 41 108 2.7E-41 T 12-10-2018 M634_11960 1c5ad154e551b0417cb7307ad64f078d 787 Gene3D G3DSA:3.30.420.10 156 347 2.4E-71 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M634_11960 1c5ad154e551b0417cb7307ad64f078d 787 SUPERFAMILY SSF56672 385 780 1.61E-118 T 12-10-2018 M634_11960 1c5ad154e551b0417cb7307ad64f078d 787 SMART SM00486 153 558 5.2E-68 T 12-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_11960 1c5ad154e551b0417cb7307ad64f078d 787 SUPERFAMILY SSF53098 4 389 2.77E-85 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M634_11960 1c5ad154e551b0417cb7307ad64f078d 787 Pfam PF03104 DNA polymerase family B, exonuclease domain 75 296 1.7E-19 T 12-10-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_11960 1c5ad154e551b0417cb7307ad64f078d 787 ProSitePatterns PS00116 DNA polymerase family B signature. 546 554 - T 12-10-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_11960 1c5ad154e551b0417cb7307ad64f078d 787 Pfam PF00136 DNA polymerase family B 377 742 2.8E-42 T 12-10-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_11960 1c5ad154e551b0417cb7307ad64f078d 787 Gene3D G3DSA:3.90.1600.10 440 636 7.9E-57 T 12-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_11960 1c5ad154e551b0417cb7307ad64f078d 787 Gene3D G3DSA:3.90.1600.10 348 439 2.6E-28 T 12-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_11960 1c5ad154e551b0417cb7307ad64f078d 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 415 428 1.6E-10 T 12-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_11960 1c5ad154e551b0417cb7307ad64f078d 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 544 552 1.6E-10 T 12-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_11960 1c5ad154e551b0417cb7307ad64f078d 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 492 504 1.6E-10 T 12-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_02495 3e08bbbbafa9e1e06f392625aabd8b29 81 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 80 25.252 T 12-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 M634_02495 3e08bbbbafa9e1e06f392625aabd8b29 81 Pfam PF02416 mttA/Hcf106 family 4 55 6.8E-14 T 12-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 M634_02495 3e08bbbbafa9e1e06f392625aabd8b29 81 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 1.5E-21 T 12-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 M634_02105 e1c859ba7a97d853484b42069f2ea61b 185 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 4 185 3.6E-39 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 M634_02105 e1c859ba7a97d853484b42069f2ea61b 185 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 1 183 40.995 T 12-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 M634_02105 e1c859ba7a97d853484b42069f2ea61b 185 SUPERFAMILY SSF55821 2 182 2.44E-58 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily M634_02105 e1c859ba7a97d853484b42069f2ea61b 185 Pfam PF01300 Telomere recombination 10 185 7.3E-50 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 M634_02105 e1c859ba7a97d853484b42069f2ea61b 185 Gene3D G3DSA:3.90.870.10 1 183 6.5E-63 T 12-10-2018 M634_21960 06bcf0ef5a68c2781bf7c9a2f2483aa1 112 SUPERFAMILY SSF46785 12 109 8.06E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_21960 06bcf0ef5a68c2781bf7c9a2f2483aa1 112 Pfam PF01638 HxlR-like helix-turn-helix 23 109 1.9E-18 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type M634_21960 06bcf0ef5a68c2781bf7c9a2f2483aa1 112 Gene3D G3DSA:1.10.10.10 8 112 2.6E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_10120 8910979244f9d1c98af602a9dbb48278 176 Gene3D G3DSA:3.30.420.10 1 176 2.8E-37 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M634_10120 8910979244f9d1c98af602a9dbb48278 176 Pfam PF00929 Exonuclease 7 171 5.7E-12 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III M634_10120 8910979244f9d1c98af602a9dbb48278 176 SMART SM00479 5 176 6.9E-5 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III M634_10120 8910979244f9d1c98af602a9dbb48278 176 SUPERFAMILY SSF53098 4 175 1.1E-28 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M634_15765 a7df4af70f4b019f38cda2a1c3422cf1 150 Gene3D G3DSA:3.40.50.10110 1 147 3.2E-43 T 12-10-2018 IPR036768 DNA polymerase III subunit chi superfamily M634_15765 a7df4af70f4b019f38cda2a1c3422cf1 150 Pfam PF04364 DNA polymerase III chi subunit, HolC 2 143 5.4E-33 T 12-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 M634_15765 a7df4af70f4b019f38cda2a1c3422cf1 150 SUPERFAMILY SSF102400 2 146 4.58E-42 T 12-10-2018 IPR036768 DNA polymerase III subunit chi superfamily M634_12285 96360b725814d92a0e1b353a4a666a19 548 Pfam PF02470 MlaD protein 159 219 1.1E-7 T 12-10-2018 IPR003399 Mce/MlaD M634_12285 96360b725814d92a0e1b353a4a666a19 548 Pfam PF02470 MlaD protein 287 391 3.9E-13 T 12-10-2018 IPR003399 Mce/MlaD M634_12285 96360b725814d92a0e1b353a4a666a19 548 Pfam PF02470 MlaD protein 43 134 1.4E-9 T 12-10-2018 IPR003399 Mce/MlaD M634_16010 7f1a31baf50bfb8a1ad1419d8340988b 188 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 25 2.3E-5 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M634_16010 7f1a31baf50bfb8a1ad1419d8340988b 188 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 25 4.7E-7 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M634_16010 7f1a31baf50bfb8a1ad1419d8340988b 188 SUPERFAMILY SSF54523 7 79 5.57E-5 T 12-10-2018 M634_16010 7f1a31baf50bfb8a1ad1419d8340988b 188 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M634_19905 f0d517ec526cf701bccd01b597ea9738 274 Gene3D G3DSA:3.40.720.10 1 260 1.1E-29 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 M634_19905 f0d517ec526cf701bccd01b597ea9738 274 SUPERFAMILY SSF53649 2 259 3.78E-47 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 M634_19905 f0d517ec526cf701bccd01b597ea9738 274 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 5 215 9.1E-15 T 12-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 M634_06970 0831d5f71c7cffa61d37720793442bef 328 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 31 325 8.8E-83 T 12-10-2018 IPR018707 Protein of unknown function DUF2219 M634_06970 0831d5f71c7cffa61d37720793442bef 328 Gene3D G3DSA:2.40.128.140 23 327 1.2E-52 T 12-10-2018 IPR037107 Putative outer membrane protein superfamily M634_18585 0457fd34c07161f56cf0b1cf0008992c 255 SUPERFAMILY SSF46785 97 154 3.87E-6 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_10810 70ae0d04e4a86aad0c181f107e2e1f66 204 SUPERFAMILY SSF52058 35 199 1.56E-13 T 12-10-2018 M634_10810 70ae0d04e4a86aad0c181f107e2e1f66 204 Gene3D G3DSA:3.80.10.10 22 203 1.6E-16 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily M634_09420 ad7229119e0eafa23545bf8aed31969e 157 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 89 106 - T 12-10-2018 IPR000614 Free Met sulfoxide reductase conserved site M634_09420 ad7229119e0eafa23545bf8aed31969e 157 Gene3D G3DSA:3.30.450.40 2 157 1.3E-63 T 12-10-2018 IPR029016 GAF-like domain superfamily M634_09420 ad7229119e0eafa23545bf8aed31969e 157 Pfam PF13185 GAF domain 30 146 2.6E-9 T 12-10-2018 IPR003018 GAF domain GO:0005515 M634_09420 ad7229119e0eafa23545bf8aed31969e 157 SUPERFAMILY SSF55781 4 145 1.61E-39 T 12-10-2018 M634_21730 ae67e3e93a25a9759a135237fcc13931 152 Gene3D G3DSA:3.90.79.10 6 141 9.9E-26 T 12-10-2018 M634_21730 ae67e3e93a25a9759a135237fcc13931 152 Pfam PF00293 NUDIX domain 12 124 7.2E-19 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 M634_21730 ae67e3e93a25a9759a135237fcc13931 152 SUPERFAMILY SSF55811 9 139 8.39E-26 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 M634_20555 50cc888f5c798a819889d2f19c1ca01d 152 Gene3D G3DSA:1.10.1130.10 66 133 1.3E-28 T 12-10-2018 M634_20555 50cc888f5c798a819889d2f19c1ca01d 152 SUPERFAMILY SSF48695 35 150 3.35E-41 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily M634_20555 50cc888f5c798a819889d2f19c1ca01d 152 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 33 146 2.9E-48 T 12-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB M634_20555 50cc888f5c798a819889d2f19c1ca01d 152 PIRSF PIRSF006105 1 152 2.8E-47 T 12-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB M634_13850 e124c989db2d7da4d4b117e48d16fe7c 416 TIGRFAM TIGR03503 TIGR03503: TIGR03503 family protein 24 400 6.3E-137 T 12-10-2018 IPR020010 Conserved hypothetical protein CHP03503 M634_17280 2ae3d73d07b32c356ec5eaa17df194c2 170 Pfam PF10973 Protein of unknown function (DUF2799) 29 110 1.7E-24 T 12-10-2018 IPR021242 Protein of unknown function DUF2799 M634_17910 f5bc4b011975a85962c9d42b4cd4ed31 231 PIRSF PIRSF028137 1 231 3.9E-105 T 12-10-2018 IPR016870 Uncharacterised conserved protein UCP028137, membrane M634_15900 9952813b74afba76923b03c70b084c52 287 Gene3D G3DSA:3.40.50.300 2 157 1.7E-5 T 12-10-2018 M634_15900 9952813b74afba76923b03c70b084c52 287 Pfam PF03668 P-loop ATPase protein family 1 284 4.1E-110 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 M634_15900 9952813b74afba76923b03c70b084c52 287 SUPERFAMILY SSF52540 2 151 1.74E-12 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_15900 9952813b74afba76923b03c70b084c52 287 PIRSF PIRSF005052 1 286 6.8E-106 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 M634_15900 9952813b74afba76923b03c70b084c52 287 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 283 39.782 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 M634_07415 de5f670641685197ae389151e1be6190 442 Gene3D G3DSA:3.60.10.10 170 441 6.0E-65 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily M634_07415 de5f670641685197ae389151e1be6190 442 SUPERFAMILY SSF56219 175 440 1.44E-64 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily M634_07415 de5f670641685197ae389151e1be6190 442 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 181 402 3.5E-10 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase M634_08090 be8bef859d24f704ba8c7a60a3ed93ec 548 Gene3D G3DSA:3.40.640.10 122 387 4.8E-115 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_08090 be8bef859d24f704ba8c7a60a3ed93ec 548 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 64 442 6.0E-57 T 12-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 M634_08090 be8bef859d24f704ba8c7a60a3ed93ec 548 TIGRFAM TIGR03799 NOD_PanD_pyr: putative pyridoxal-dependent aspartate 1-decarboxylase 6 527 1.7E-301 T 12-10-2018 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 M634_08090 be8bef859d24f704ba8c7a60a3ed93ec 548 Gene3D G3DSA:3.90.1150.170 51 524 4.8E-115 T 12-10-2018 M634_08090 be8bef859d24f704ba8c7a60a3ed93ec 548 SUPERFAMILY SSF53383 29 530 9.79E-118 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_17545 55f62d3d7254e6f7bd809cbb6cab3fc0 225 SUPERFAMILY SSF53955 50 221 5.91E-57 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily M634_17545 55f62d3d7254e6f7bd809cbb6cab3fc0 225 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 5 220 3.4E-67 T 12-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M634_17545 55f62d3d7254e6f7bd809cbb6cab3fc0 225 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 4 223 37.852 T 12-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M634_17545 55f62d3d7254e6f7bd809cbb6cab3fc0 225 Gene3D G3DSA:1.10.3810.10 47 224 5.3E-53 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M634_17545 55f62d3d7254e6f7bd809cbb6cab3fc0 225 Pfam PF00912 Transglycosylase 52 217 1.6E-50 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 M634_05535 408a5f9084240773258fbfa1dcc91723 339 SUPERFAMILY SSF48019 211 331 2.21E-30 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 M634_05535 408a5f9084240773258fbfa1dcc91723 339 Gene3D G3DSA:1.20.272.10 213 337 7.6E-38 T 12-10-2018 M634_05535 408a5f9084240773258fbfa1dcc91723 339 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 331 1.0E-101 T 12-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 M634_05535 408a5f9084240773258fbfa1dcc91723 339 Gene3D G3DSA:1.10.8.60 143 212 8.7E-20 T 12-10-2018 M634_05535 408a5f9084240773258fbfa1dcc91723 339 Pfam PF06144 DNA polymerase III, delta subunit 20 189 2.1E-46 T 12-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 M634_05535 408a5f9084240773258fbfa1dcc91723 339 Gene3D G3DSA:3.40.50.300 1 139 2.4E-49 T 12-10-2018 M634_05535 408a5f9084240773258fbfa1dcc91723 339 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 332 2.5E-30 T 12-10-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_05535 408a5f9084240773258fbfa1dcc91723 339 SUPERFAMILY SSF52540 1 208 4.57E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_00305 6199272415c5309ff5716d106c9498a2 386 Gene3D G3DSA:3.90.1150.10 249 386 1.9E-50 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M634_00305 6199272415c5309ff5716d106c9498a2 386 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 191 205 - T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 M634_00305 6199272415c5309ff5716d106c9498a2 386 SUPERFAMILY SSF53383 9 381 1.85E-116 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_00305 6199272415c5309ff5716d106c9498a2 386 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 381 5.8E-136 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 M634_00305 6199272415c5309ff5716d106c9498a2 386 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 4 382 4.3E-201 T 12-10-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 M634_00305 6199272415c5309ff5716d106c9498a2 386 PIRSF PIRSF001434 1 385 7.6E-131 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 M634_00305 6199272415c5309ff5716d106c9498a2 386 Gene3D G3DSA:3.40.640.10 3 248 6.7E-83 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_18740 9a881441ed8a4f9113b5d44e3b33095b 285 Pfam PF08543 Phosphomethylpyrimidine kinase 27 275 3.0E-94 T 12-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 M634_18740 9a881441ed8a4f9113b5d44e3b33095b 285 Gene3D G3DSA:3.40.1190.20 2 284 1.5E-101 T 12-10-2018 IPR029056 Ribokinase-like M634_18740 9a881441ed8a4f9113b5d44e3b33095b 285 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 20 277 3.4E-101 T 12-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 M634_18740 9a881441ed8a4f9113b5d44e3b33095b 285 SUPERFAMILY SSF53613 17 278 2.65E-81 T 12-10-2018 IPR029056 Ribokinase-like M634_13290 64c2fd2fad0ef404856ca911a187fa18 109 SUPERFAMILY SSF82607 11 103 1.01E-36 T 12-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily M634_13290 64c2fd2fad0ef404856ca911a187fa18 109 PIRSF PIRSF004555 3 109 1.2E-40 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family M634_13290 64c2fd2fad0ef404856ca911a187fa18 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 23.43 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family M634_13290 64c2fd2fad0ef404856ca911a187fa18 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 3.4E-40 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family M634_13290 64c2fd2fad0ef404856ca911a187fa18 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 100 1.8E-35 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family M634_13290 64c2fd2fad0ef404856ca911a187fa18 109 Gene3D G3DSA:3.30.1310.10 1 109 4.7E-48 T 12-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily M634_02295 9c6e2d6dc585af8ff52263ff409c3c99 335 SUPERFAMILY SSF47413 9 67 2.15E-14 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M634_02295 9c6e2d6dc585af8ff52263ff409c3c99 335 Gene3D G3DSA:3.40.50.2300 70 311 1.6E-65 T 12-10-2018 M634_02295 9c6e2d6dc585af8ff52263ff409c3c99 335 SMART SM00354 9 79 2.6E-26 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M634_02295 9c6e2d6dc585af8ff52263ff409c3c99 335 SUPERFAMILY SSF53822 67 321 1.69E-56 T 12-10-2018 IPR028082 Periplasmic binding protein-like I M634_02295 9c6e2d6dc585af8ff52263ff409c3c99 335 Gene3D G3DSA:1.10.260.40 1 67 1.9E-17 T 12-10-2018 M634_02295 9c6e2d6dc585af8ff52263ff409c3c99 335 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 68 313 5.5E-28 T 12-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain M634_02295 9c6e2d6dc585af8ff52263ff409c3c99 335 Gene3D G3DSA:3.40.50.2300 167 295 1.6E-65 T 12-10-2018 M634_02295 9c6e2d6dc585af8ff52263ff409c3c99 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 56 2.4E-17 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 M634_02295 9c6e2d6dc585af8ff52263ff409c3c99 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 12 30 - T 12-10-2018 M634_09150 447baaf7be1a5b9fa0bcc2bb444c12e5 114 PIRSF PIRSF017117 1 112 3.7E-43 T 12-10-2018 IPR016684 Type III secretion system chaperone, YscY M634_09150 447baaf7be1a5b9fa0bcc2bb444c12e5 114 Pfam PF14559 Tetratricopeptide repeat 19 74 4.8E-10 T 12-10-2018 M634_09150 447baaf7be1a5b9fa0bcc2bb444c12e5 114 Gene3D G3DSA:1.25.40.10 2 113 3.6E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_09150 447baaf7be1a5b9fa0bcc2bb444c12e5 114 SUPERFAMILY SSF48452 5 110 1.88E-16 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_15700 8138e056ad05bda4c2a1655d094dafda 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 95 5.1E-24 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 M634_15700 8138e056ad05bda4c2a1655d094dafda 101 Gene3D G3DSA:3.40.50.2300 2 101 7.0E-38 T 12-10-2018 M634_15700 8138e056ad05bda4c2a1655d094dafda 101 SUPERFAMILY SSF52794 1 101 3.53E-36 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 M634_11080 21ae7d8ffc381f4554d55bfefc514d4a 248 SUPERFAMILY SSF50494 10 185 2.07E-16 T 12-10-2018 IPR009003 Peptidase S1, PA clan M634_11080 21ae7d8ffc381f4554d55bfefc514d4a 248 Gene3D G3DSA:2.40.10.120 11 200 3.4E-8 T 12-10-2018 M634_17765 75f8cc7e895c6ee01554f22d587e8d18 610 Pfam PF04183 IucA / IucC family 162 372 1.8E-33 T 12-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 M634_17765 75f8cc7e895c6ee01554f22d587e8d18 610 Pfam PF06276 Ferric iron reductase FhuF-like transporter 396 555 5.3E-14 T 12-10-2018 IPR022770 Ferric iron reductase FhuF domain M634_17765 75f8cc7e895c6ee01554f22d587e8d18 610 Gene3D G3DSA:1.10.510.40 363 541 8.7E-10 T 12-10-2018 M634_16735 abe24b48fafebd5d19c69b56192e79fc 158 Pfam PF14316 Domain of unknown function (DUF4381) 9 146 4.6E-37 T 12-10-2018 IPR025489 Protein of unknown function (DUF4381 M634_20285 6de91edbfc5b0abaed46dd65ad72e884 239 Gene3D G3DSA:3.40.50.720 1 239 4.8E-78 T 12-10-2018 M634_20285 6de91edbfc5b0abaed46dd65ad72e884 239 SUPERFAMILY SSF51735 3 223 4.91E-63 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_20285 6de91edbfc5b0abaed46dd65ad72e884 239 Pfam PF00106 short chain dehydrogenase 3 188 2.4E-52 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20285 6de91edbfc5b0abaed46dd65ad72e884 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 M634_20285 6de91edbfc5b0abaed46dd65ad72e884 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 5.1E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20285 6de91edbfc5b0abaed46dd65ad72e884 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 5.1E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20285 6de91edbfc5b0abaed46dd65ad72e884 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 5.1E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20285 6de91edbfc5b0abaed46dd65ad72e884 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 2.5E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20285 6de91edbfc5b0abaed46dd65ad72e884 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 2.5E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20285 6de91edbfc5b0abaed46dd65ad72e884 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 2.5E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20285 6de91edbfc5b0abaed46dd65ad72e884 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.5E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20285 6de91edbfc5b0abaed46dd65ad72e884 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 2.5E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_20285 6de91edbfc5b0abaed46dd65ad72e884 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 2.5E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_18540 bc95b0accc4e8b48a268fc05aa63bff0 392 Gene3D G3DSA:2.10.10.20 349 392 2.4E-18 T 12-10-2018 M634_18540 bc95b0accc4e8b48a268fc05aa63bff0 392 SUPERFAMILY SSF81296 26 217 3.22E-50 T 12-10-2018 IPR014756 Immunoglobulin E-set M634_18540 bc95b0accc4e8b48a268fc05aa63bff0 392 SUPERFAMILY SSF51055 340 389 1.31E-13 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M634_18540 bc95b0accc4e8b48a268fc05aa63bff0 392 Gene3D G3DSA:2.70.50.50 26 219 1.2E-64 T 12-10-2018 M634_18540 bc95b0accc4e8b48a268fc05aa63bff0 392 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 26 214 1.8E-37 T 12-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal M634_18540 bc95b0accc4e8b48a268fc05aa63bff0 392 SMART SM00495 349 392 1.5E-7 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M634_09115 208ba5fb66b4e885302889df809c7f78 446 TIGRFAM TIGR02514 type_III_yscP: type III secretion system needle length determinant 307 443 5.8E-50 T 12-10-2018 IPR013354 Type III secretion system needle length determinant, C-terminal domain GO:0009405 M634_22550 a0a71252b7d495a1b41cee7ee442724c 458 PIRSF PIRSF000204 1 458 4.2E-235 T 12-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 M634_22550 a0a71252b7d495a1b41cee7ee442724c 458 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 456 7.1E-204 T 12-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 M634_22550 a0a71252b7d495a1b41cee7ee442724c 458 SUPERFAMILY SSF52467 285 458 1.54E-78 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily M634_22550 a0a71252b7d495a1b41cee7ee442724c 458 Gene3D G3DSA:3.40.50.1220 282 458 3.3E-89 T 12-10-2018 M634_12985 6bd188d47a33232c0b0ec240e3489b3e 278 PIRSF PIRSF018249 1 274 3.0E-87 T 12-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 M634_12985 6bd188d47a33232c0b0ec240e3489b3e 278 SUPERFAMILY SSF53335 4 258 7.54E-48 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_12985 6bd188d47a33232c0b0ec240e3489b3e 278 Pfam PF13847 Methyltransferase domain 87 204 2.9E-15 T 12-10-2018 IPR025714 Methyltransferase domain M634_12985 6bd188d47a33232c0b0ec240e3489b3e 278 Gene3D G3DSA:3.40.50.150 1 273 6.2E-81 T 12-10-2018 M634_13600 cb92df075d3936ba76a46028e37abbf4 137 Pfam PF04347 Flagellar biosynthesis protein, FliO 54 131 1.5E-19 T 12-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 M634_13600 cb92df075d3936ba76a46028e37abbf4 137 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 42 109 3.8E-22 T 12-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 M634_09030 36b29ed91196be63641899834f2f9f5e 119 TIGRFAM TIGR02508 type_III_yscG: type III secretion protein, YscG family 1 117 2.6E-52 T 12-10-2018 IPR013348 Type III secretion system YscG GO:0009405 M634_09030 36b29ed91196be63641899834f2f9f5e 119 Pfam PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) 1 117 5.5E-51 T 12-10-2018 IPR013348 Type III secretion system YscG GO:0009405 M634_09030 36b29ed91196be63641899834f2f9f5e 119 Gene3D G3DSA:1.25.40.10 1 117 7.1E-37 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_16670 2df383105e27ab76013df0f998655a40 289 SUPERFAMILY SSF50182 96 169 5.23E-10 T 12-10-2018 IPR010920 LSM domain superfamily M634_16670 2df383105e27ab76013df0f998655a40 289 Pfam PF00924 Mechanosensitive ion channel 59 184 9.8E-16 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 M634_11670 786846a3576850eb96b3a67a52fa9adb 386 Pfam PF00589 Phage integrase family 199 361 7.2E-20 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 M634_11670 786846a3576850eb96b3a67a52fa9adb 386 Pfam PF13356 Arm DNA-binding domain 4 90 4.0E-15 T 12-10-2018 IPR025166 Integrase, DNA-binding domain M634_11670 786846a3576850eb96b3a67a52fa9adb 386 SUPERFAMILY SSF56349 95 370 3.53E-40 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 M634_11670 786846a3576850eb96b3a67a52fa9adb 386 Gene3D G3DSA:1.10.150.130 90 196 1.6E-7 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal M634_11670 786846a3576850eb96b3a67a52fa9adb 386 Gene3D G3DSA:1.10.443.10 197 373 4.6E-19 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 M634_11670 786846a3576850eb96b3a67a52fa9adb 386 Gene3D G3DSA:3.30.160.390 1 89 3.5E-20 T 12-10-2018 IPR038488 Integrase, DNA-binding domain superfamily M634_05705 6eef8e8b6794a135bdef1bdfee6ac8ab 311 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 126 141 - T 12-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 M634_05705 6eef8e8b6794a135bdef1bdfee6ac8ab 311 Gene3D G3DSA:3.40.50.2020 4 299 6.9E-136 T 12-10-2018 M634_05705 6eef8e8b6794a135bdef1bdfee6ac8ab 311 Gene3D G3DSA:3.40.50.2020 145 287 6.9E-136 T 12-10-2018 M634_05705 6eef8e8b6794a135bdef1bdfee6ac8ab 311 Pfam PF14572 Phosphoribosyl synthetase-associated domain 201 310 1.9E-31 T 12-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 M634_05705 6eef8e8b6794a135bdef1bdfee6ac8ab 311 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 1 118 1.4E-50 T 12-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 M634_05705 6eef8e8b6794a135bdef1bdfee6ac8ab 311 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 1 311 2.8E-125 T 12-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 M634_05705 6eef8e8b6794a135bdef1bdfee6ac8ab 311 SUPERFAMILY SSF53271 66 303 2.56E-67 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like M634_05705 6eef8e8b6794a135bdef1bdfee6ac8ab 311 SMART SM01400 1 118 2.0E-77 T 12-10-2018 M634_05705 6eef8e8b6794a135bdef1bdfee6ac8ab 311 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 1 311 49.844 T 12-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 M634_06460 2d85b092234a086b230eb9d24f4e6ce5 571 SUPERFAMILY SSF53448 11 240 1.31E-32 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M634_06460 2d85b092234a086b230eb9d24f4e6ce5 571 Pfam PF00535 Glycosyl transferase family 2 11 130 2.9E-18 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 M634_06460 2d85b092234a086b230eb9d24f4e6ce5 571 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 264 560 2.0E-15 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 M634_06460 2d85b092234a086b230eb9d24f4e6ce5 571 Gene3D G3DSA:3.90.550.10 10 219 1.6E-25 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M634_16290 0f49659103a36c24a3c544b583c7a3df 346 Gene3D G3DSA:3.30.420.10 161 328 9.0E-16 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M634_16290 0f49659103a36c24a3c544b583c7a3df 346 Pfam PF13551 Winged helix-turn helix 11 74 9.6E-21 T 12-10-2018 M634_16290 0f49659103a36c24a3c544b583c7a3df 346 Pfam PF00665 Integrase core domain 161 283 2.0E-20 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M634_16290 0f49659103a36c24a3c544b583c7a3df 346 SUPERFAMILY SSF53098 160 333 4.43E-37 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M634_16290 0f49659103a36c24a3c544b583c7a3df 346 SUPERFAMILY SSF46689 18 113 3.23E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_23095 7933d9c58b1c221e9330a973448737c9 176 PIRSF PIRSF028301 1 174 1.3E-66 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 M634_23095 7933d9c58b1c221e9330a973448737c9 176 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 6 161 1.2E-60 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 M634_23095 7933d9c58b1c221e9330a973448737c9 176 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 9 161 2.5E-62 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 M634_06850 293250ff04ab311c8867d4d88b82195b 130 Pfam PF07233 Protein of unknown function (DUF1425) 35 125 1.9E-29 T 12-10-2018 IPR010824 Protein of unknown function DUF1425 M634_06850 293250ff04ab311c8867d4d88b82195b 130 Gene3D G3DSA:2.60.40.3230 18 129 6.7E-28 T 12-10-2018 IPR038483 YcfL-like superfamily M634_04660 f2e7b003920becf6f6eb31b22cc52f89 495 Gene3D G3DSA:3.40.190.10 134 238 3.9E-49 T 12-10-2018 M634_04660 f2e7b003920becf6f6eb31b22cc52f89 495 SUPERFAMILY SSF53850 40 278 6.21E-37 T 12-10-2018 M634_04660 f2e7b003920becf6f6eb31b22cc52f89 495 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 55 268 4.3E-27 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M634_04660 f2e7b003920becf6f6eb31b22cc52f89 495 Gene3D G3DSA:3.40.190.10 40 271 3.9E-49 T 12-10-2018 M634_04660 f2e7b003920becf6f6eb31b22cc52f89 495 Gene3D G3DSA:1.10.530.10 298 464 1.4E-39 T 12-10-2018 M634_04660 f2e7b003920becf6f6eb31b22cc52f89 495 SMART SM00062 45 282 4.1E-19 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M634_04660 f2e7b003920becf6f6eb31b22cc52f89 495 Pfam PF01464 Transglycosylase SLT domain 304 417 8.5E-22 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 M634_04660 f2e7b003920becf6f6eb31b22cc52f89 495 SUPERFAMILY SSF53955 299 459 2.75E-37 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily M634_20775 9838c4dd7f52cd0c7c7a5df9bf822798 677 Gene3D G3DSA:3.30.300.30 544 670 1.5E-14 T 12-10-2018 M634_20775 9838c4dd7f52cd0c7c7a5df9bf822798 677 Gene3D G3DSA:3.40.50.12780 78 540 1.7E-53 T 12-10-2018 M634_20775 9838c4dd7f52cd0c7c7a5df9bf822798 677 ProSitePatterns PS00455 Putative AMP-binding domain signature. 289 300 - T 12-10-2018 IPR020845 AMP-binding, conserved site M634_20775 9838c4dd7f52cd0c7c7a5df9bf822798 677 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 5 663 4.5E-228 T 12-10-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 M634_20775 9838c4dd7f52cd0c7c7a5df9bf822798 677 SUPERFAMILY SSF56801 36 662 1.57E-112 T 12-10-2018 M634_20775 9838c4dd7f52cd0c7c7a5df9bf822798 677 Pfam PF00501 AMP-binding enzyme 109 544 1.1E-43 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 M634_17460 2cc667efeeac50e08a83c8d61c0f0a92 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 2.3E-12 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_17460 2cc667efeeac50e08a83c8d61c0f0a92 296 SUPERFAMILY SSF46785 6 103 5.22E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_17460 2cc667efeeac50e08a83c8d61c0f0a92 296 Gene3D G3DSA:3.40.190.290 96 273 1.3E-17 T 12-10-2018 M634_17460 2cc667efeeac50e08a83c8d61c0f0a92 296 SUPERFAMILY SSF53850 92 293 1.1E-22 T 12-10-2018 M634_17460 2cc667efeeac50e08a83c8d61c0f0a92 296 Gene3D G3DSA:1.10.10.10 1 88 8.5E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_17460 2cc667efeeac50e08a83c8d61c0f0a92 296 Pfam PF03466 LysR substrate binding domain 92 291 1.2E-19 T 12-10-2018 IPR005119 LysR, substrate-binding M634_10150 72056169211c8f891ffbb0521193ba6b 228 Pfam PF03352 Methyladenine glycosylase 46 139 5.2E-15 T 12-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 M634_10150 72056169211c8f891ffbb0521193ba6b 228 Gene3D G3DSA:1.10.340.30 37 164 1.8E-18 T 12-10-2018 M634_10150 72056169211c8f891ffbb0521193ba6b 228 SUPERFAMILY SSF48150 39 184 3.92E-40 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 M634_05915 a860373c7a25bb6680408aba2fd72550 259 Pfam PF02107 Flagellar L-ring protein 80 257 1.8E-56 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 M634_05915 a860373c7a25bb6680408aba2fd72550 259 PRINTS PR01008 Flagellar L-ring protein signature 222 236 6.6E-21 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 M634_05915 a860373c7a25bb6680408aba2fd72550 259 PRINTS PR01008 Flagellar L-ring protein signature 201 217 6.6E-21 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 M634_05915 a860373c7a25bb6680408aba2fd72550 259 PRINTS PR01008 Flagellar L-ring protein signature 238 252 6.6E-21 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 M634_05915 a860373c7a25bb6680408aba2fd72550 259 PRINTS PR01008 Flagellar L-ring protein signature 102 114 6.6E-21 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 M634_05915 a860373c7a25bb6680408aba2fd72550 259 PRINTS PR01008 Flagellar L-ring protein signature 175 190 6.6E-21 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 M634_05915 a860373c7a25bb6680408aba2fd72550 259 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 259 27.546 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 M634_11190 fb0acfd5e5f497f6bd23d08f0fb0198d 95 Gene3D G3DSA:3.30.2310.20 1 92 6.1E-17 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily M634_11190 fb0acfd5e5f497f6bd23d08f0fb0198d 95 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 88 2.2E-15 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family M634_10615 fb0acfd5e5f497f6bd23d08f0fb0198d 95 Gene3D G3DSA:3.30.2310.20 1 92 6.1E-17 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily M634_10615 fb0acfd5e5f497f6bd23d08f0fb0198d 95 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 88 2.2E-15 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family M634_05060 e70c17fb4f0c66058e675479be0e91db 326 Pfam PF12710 haloacid dehalogenase-like hydrolase 63 264 1.5E-18 T 12-10-2018 M634_05060 e70c17fb4f0c66058e675479be0e91db 326 Gene3D G3DSA:3.40.50.1000 112 314 9.6E-42 T 12-10-2018 IPR023214 HAD superfamily M634_05060 e70c17fb4f0c66058e675479be0e91db 326 SUPERFAMILY SSF56784 61 312 1.29E-23 T 12-10-2018 IPR036412 HAD-like superfamily M634_04940 84f5edd39db94c9da79a1cc0c31fb4b8 204 SUPERFAMILY SSF48452 89 188 3.8E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_04940 84f5edd39db94c9da79a1cc0c31fb4b8 204 Gene3D G3DSA:1.25.40.10 31 203 1.4E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_04940 84f5edd39db94c9da79a1cc0c31fb4b8 204 PIRSF PIRSF006170 1 204 1.5E-53 T 12-10-2018 IPR026039 Uncharacterised protein family UPF0070 M634_04940 84f5edd39db94c9da79a1cc0c31fb4b8 204 Pfam PF09976 Tetratricopeptide repeat-like domain 15 204 2.4E-55 T 12-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 M634_16470 169f960755cc810a9879e161e1ed2a85 524 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 307 513 2.5E-15 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_16470 169f960755cc810a9879e161e1ed2a85 524 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 110 270 3.1E-60 T 12-10-2018 IPR029345 Maltose transport system permease protein MalF, P2 domain M634_16470 169f960755cc810a9879e161e1ed2a85 524 Gene3D G3DSA:1.20.58.370 16 105 3.7E-33 T 12-10-2018 IPR035277 MalF, N-terminal M634_16470 169f960755cc810a9879e161e1ed2a85 524 Gene3D G3DSA:3.10.650.10 108 278 2.3E-52 T 12-10-2018 M634_16470 169f960755cc810a9879e161e1ed2a85 524 SUPERFAMILY SSF160964 24 270 7.19E-82 T 12-10-2018 M634_16470 169f960755cc810a9879e161e1ed2a85 524 SUPERFAMILY SSF161098 273 514 4.84E-57 T 12-10-2018 IPR035906 MetI-like superfamily M634_16470 169f960755cc810a9879e161e1ed2a85 524 Gene3D G3DSA:2.40.430.10 128 214 2.3E-52 T 12-10-2018 M634_16470 169f960755cc810a9879e161e1ed2a85 524 Gene3D G3DSA:1.10.3720.10 280 523 3.0E-68 T 12-10-2018 IPR035906 MetI-like superfamily M634_01050 030e3229d46e64489a7c28e2580f498c 307 Gene3D G3DSA:3.40.50.720 91 276 2.7E-96 T 12-10-2018 M634_01050 030e3229d46e64489a7c28e2580f498c 307 Gene3D G3DSA:3.40.50.720 32 299 2.7E-96 T 12-10-2018 M634_01050 030e3229d46e64489a7c28e2580f498c 307 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 99 272 2.8E-49 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 M634_01050 030e3229d46e64489a7c28e2580f498c 307 SUPERFAMILY SSF52283 25 120 2.32E-7 T 12-10-2018 M634_01050 030e3229d46e64489a7c28e2580f498c 307 SUPERFAMILY SSF51735 93 273 5.71E-47 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_21500 e16e3a3128b89742b671f2c88af7c0e6 299 Gene3D G3DSA:3.40.190.290 104 293 5.7E-8 T 12-10-2018 M634_21500 e16e3a3128b89742b671f2c88af7c0e6 299 Gene3D G3DSA:1.10.10.10 2 92 1.4E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_21500 e16e3a3128b89742b671f2c88af7c0e6 299 SUPERFAMILY SSF46785 9 89 1.72E-11 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_21500 e16e3a3128b89742b671f2c88af7c0e6 299 Pfam PF03466 LysR substrate binding domain 104 294 2.7E-11 T 12-10-2018 IPR005119 LysR, substrate-binding M634_21500 e16e3a3128b89742b671f2c88af7c0e6 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 68 1.4E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_21500 e16e3a3128b89742b671f2c88af7c0e6 299 SUPERFAMILY SSF53850 100 296 5.43E-15 T 12-10-2018 M634_03915 748988d61399fa62b83e3bc184581c99 291 SUPERFAMILY SSF56349 46 288 6.36E-11 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 M634_03915 748988d61399fa62b83e3bc184581c99 291 Pfam PF12835 Integrase 113 236 3.8E-14 T 12-10-2018 IPR024456 Integrase catalytic domain, putative M634_03915 748988d61399fa62b83e3bc184581c99 291 Gene3D G3DSA:1.10.443.10 112 290 7.4E-9 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 M634_03915 748988d61399fa62b83e3bc184581c99 291 Pfam PF12834 Phage integrase, N-terminal 6 93 9.8E-19 T 12-10-2018 IPR024457 Putative integrase, N-terminal M634_10380 9e50984d9d0a947ba430178edff3350f 288 TIGRFAM TIGR03381 agmatine_aguB: N-carbamoylputrescine amidase 5 282 1.6E-143 T 12-10-2018 IPR017755 N-carbamoylputrescine amidase GO:0006596|GO:0050126 KEGG: 00330+3.5.1.53|MetaCyc: PWY-43 M634_10380 9e50984d9d0a947ba430178edff3350f 288 Pfam PF00795 Carbon-nitrogen hydrolase 8 266 3.2E-59 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 M634_10380 9e50984d9d0a947ba430178edff3350f 288 SUPERFAMILY SSF56317 4 281 6.67E-84 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily M634_10380 9e50984d9d0a947ba430178edff3350f 288 Gene3D G3DSA:3.60.110.10 1 286 8.4E-108 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily M634_17870 1d2884247970b9f63282410b6ff1efd8 152 Pfam PF01047 MarR family 46 103 8.0E-17 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M634_17870 1d2884247970b9f63282410b6ff1efd8 152 SUPERFAMILY SSF46785 13 151 7.11E-36 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_17870 1d2884247970b9f63282410b6ff1efd8 152 Gene3D G3DSA:1.10.10.10 11 152 7.4E-38 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_17870 1d2884247970b9f63282410b6ff1efd8 152 SMART SM00347 39 137 4.0E-25 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M634_17870 1d2884247970b9f63282410b6ff1efd8 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 80 95 1.2E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M634_17870 1d2884247970b9f63282410b6ff1efd8 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 99 115 1.2E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M634_17870 1d2884247970b9f63282410b6ff1efd8 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 79 1.2E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 M634_22770 10331d6cd9c7c8f5441a5d19d1e63857 297 Pfam PF12833 Helix-turn-helix domain 213 292 8.9E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_22770 10331d6cd9c7c8f5441a5d19d1e63857 297 SUPERFAMILY SSF46689 243 293 7.89E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_22770 10331d6cd9c7c8f5441a5d19d1e63857 297 SUPERFAMILY SSF51215 35 169 1.31E-7 T 12-10-2018 IPR037923 Transcription regulator HTH-like M634_22770 10331d6cd9c7c8f5441a5d19d1e63857 297 Gene3D G3DSA:1.10.10.60 188 296 1.9E-25 T 12-10-2018 M634_22770 10331d6cd9c7c8f5441a5d19d1e63857 297 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 274 290 1.6E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M634_22770 10331d6cd9c7c8f5441a5d19d1e63857 297 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 274 1.6E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M634_22770 10331d6cd9c7c8f5441a5d19d1e63857 297 SMART SM00342 207 290 9.1E-27 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_22770 10331d6cd9c7c8f5441a5d19d1e63857 297 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 244 286 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 M634_19475 9a5c9f6bf05ac5faa4d1790df6b3d8e1 93 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 90 3.5E-16 T 12-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 M634_19475 9a5c9f6bf05ac5faa4d1790df6b3d8e1 93 Pfam PF04316 Anti-sigma-28 factor, FlgM 43 86 4.1E-6 T 12-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal M634_19475 9a5c9f6bf05ac5faa4d1790df6b3d8e1 93 SUPERFAMILY SSF101498 26 89 2.09E-8 T 12-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily M634_01735 b0d3ae2526220c9c1e781b34bf16eb63 207 Pfam PF09186 Domain of unknown function (DUF1949) 143 196 5.8E-11 T 12-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal M634_01735 b0d3ae2526220c9c1e781b34bf16eb63 207 SUPERFAMILY SSF54211 5 134 2.62E-41 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M634_01735 b0d3ae2526220c9c1e781b34bf16eb63 207 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 5 200 2.0E-64 T 12-10-2018 IPR015796 Impact family, bacterial/archaeal M634_01735 b0d3ae2526220c9c1e781b34bf16eb63 207 Pfam PF01205 Uncharacterized protein family UPF0029 20 127 9.1E-26 T 12-10-2018 IPR001498 Impact, N-terminal M634_01735 b0d3ae2526220c9c1e781b34bf16eb63 207 SUPERFAMILY SSF54980 139 204 6.62E-9 T 12-10-2018 IPR035647 EF-G domain III/V-like M634_01735 b0d3ae2526220c9c1e781b34bf16eb63 207 Gene3D G3DSA:3.30.230.30 2 136 9.2E-49 T 12-10-2018 IPR036956 Impact, N-terminal domain superfamily M634_19735 3109f797ef836a11c80d28d25305e90d 294 Gene3D G3DSA:3.40.190.10 100 289 1.1E-34 T 12-10-2018 M634_19735 3109f797ef836a11c80d28d25305e90d 294 SUPERFAMILY SSF53850 88 293 1.03E-23 T 12-10-2018 M634_19735 3109f797ef836a11c80d28d25305e90d 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 3.0E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_19735 3109f797ef836a11c80d28d25305e90d 294 Pfam PF03466 LysR substrate binding domain 87 293 1.2E-20 T 12-10-2018 IPR005119 LysR, substrate-binding M634_19735 3109f797ef836a11c80d28d25305e90d 294 Gene3D G3DSA:1.10.10.10 5 94 1.2E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_19735 3109f797ef836a11c80d28d25305e90d 294 SUPERFAMILY SSF46785 2 82 4.87E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_19735 3109f797ef836a11c80d28d25305e90d 294 Gene3D G3DSA:3.40.190.10 159 262 1.1E-34 T 12-10-2018 M634_19735 3109f797ef836a11c80d28d25305e90d 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 6.1E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_19735 3109f797ef836a11c80d28d25305e90d 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 6.1E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_19735 3109f797ef836a11c80d28d25305e90d 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 6.1E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_03375 dc8e1b2b869c12c3d75eecb65f278b23 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.103 T 12-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 M634_03375 dc8e1b2b869c12c3d75eecb65f278b23 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 8.5E-51 T 12-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03375 dc8e1b2b869c12c3d75eecb65f278b23 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 1.6E-31 T 12-10-2018 IPR021131 Ribosomal protein L18e/L15P M634_03375 dc8e1b2b869c12c3d75eecb65f278b23 144 Gene3D G3DSA:3.100.10.10 70 144 2.7E-13 T 12-10-2018 M634_03375 dc8e1b2b869c12c3d75eecb65f278b23 144 SUPERFAMILY SSF52080 4 143 1.44E-46 T 12-10-2018 IPR036227 Ribosomal L18e/L15P superfamily M634_03375 dc8e1b2b869c12c3d75eecb65f278b23 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 12-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_20830 0d39e6bcfc262a137ababecdeb5a1efd 400 Gene3D G3DSA:3.40.50.12780 2 316 8.8E-60 T 12-10-2018 M634_20830 0d39e6bcfc262a137ababecdeb5a1efd 400 Pfam PF00501 AMP-binding enzyme 123 275 2.4E-12 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 M634_20830 0d39e6bcfc262a137ababecdeb5a1efd 400 SUPERFAMILY SSF56801 116 340 4.45E-30 T 12-10-2018 M634_15310 68ad40b71af121eb1c54de35a9df93e6 212 Gene3D G3DSA:1.10.10.880 6 71 5.0E-25 T 12-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 M634_15310 68ad40b71af121eb1c54de35a9df93e6 212 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 144 195 1.4E-19 T 12-10-2018 IPR005573 Anti sigma-E protein RseA, C-terminal M634_15310 68ad40b71af121eb1c54de35a9df93e6 212 SUPERFAMILY SSF89069 8 71 2.75E-21 T 12-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 M634_15310 68ad40b71af121eb1c54de35a9df93e6 212 PIRSF PIRSF016938 3 206 9.0E-35 T 12-10-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0016989 M634_15310 68ad40b71af121eb1c54de35a9df93e6 212 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 5 103 7.8E-35 T 12-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 M634_06025 cfbf008d4436d1b1a068f30e25ccc86f 527 TIGRFAM TIGR03369 cellulose_bcsE: cellulose biosynthesis protein BcsE 160 479 9.0E-98 T 12-10-2018 IPR017745 BcsE, GIL domain GO:0035438 M634_06025 cfbf008d4436d1b1a068f30e25ccc86f 527 Pfam PF10995 GGDEF I-site like or GIL domain 166 478 1.0E-100 T 12-10-2018 IPR017745 BcsE, GIL domain GO:0035438 M634_09455 2003349d93b0c6c3d7941a414020172e 180 Pfam PF07126 Cell-division protein ZapC 1 168 3.3E-66 T 12-10-2018 IPR009809 Cell division protein ZapC M634_09455 2003349d93b0c6c3d7941a414020172e 180 Hamap MF_00906 Cell division protein ZapC [zapC]. 1 177 36.457 T 12-10-2018 IPR009809 Cell division protein ZapC M634_09455 2003349d93b0c6c3d7941a414020172e 180 PIRSF PIRSF010252 1 178 3.1E-72 T 12-10-2018 IPR009809 Cell division protein ZapC M634_23710 8238a7173031e1ebe86f678c42c83dfd 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 374 8.6E-129 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 M634_23710 8238a7173031e1ebe86f678c42c83dfd 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 M634_23710 8238a7173031e1ebe86f678c42c83dfd 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 M634_23710 8238a7173031e1ebe86f678c42c83dfd 382 SUPERFAMILY SSF56796 5 381 8.5E-138 T 12-10-2018 M634_23710 8238a7173031e1ebe86f678c42c83dfd 382 Gene3D G3DSA:3.40.50.1970 2 183 9.6E-58 T 12-10-2018 M634_23710 8238a7173031e1ebe86f678c42c83dfd 382 Gene3D G3DSA:1.20.1090.10 184 382 9.7E-79 T 12-10-2018 M634_14505 043d625e33977edb9408b0c8a0fc9627 69 Pfam PF06568 Domain of unknown function (DUF1127) 24 59 5.5E-11 T 12-10-2018 IPR009506 Protein of unknown function DUF1127 M634_03170 c060cd1adb27df2ac0b6eaf0f1648a3d 391 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 382 5.9E-97 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase M634_03170 c060cd1adb27df2ac0b6eaf0f1648a3d 391 Gene3D G3DSA:3.90.1150.10 257 387 4.2E-14 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M634_03170 c060cd1adb27df2ac0b6eaf0f1648a3d 391 SUPERFAMILY SSF53383 8 386 1.17E-102 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_03170 c060cd1adb27df2ac0b6eaf0f1648a3d 391 Gene3D G3DSA:3.40.640.10 3 256 4.3E-86 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_03170 c060cd1adb27df2ac0b6eaf0f1648a3d 391 PIRSF PIRSF000390 3 389 5.0E-119 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase M634_14875 05fb2fb876258d6d5bbe547dcd8f1ea2 771 SUPERFAMILY SSF52151 39 326 1.1E-56 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase M634_14875 05fb2fb876258d6d5bbe547dcd8f1ea2 771 Gene3D G3DSA:3.10.20.310 351 425 5.3E-7 T 12-10-2018 M634_14875 05fb2fb876258d6d5bbe547dcd8f1ea2 771 Pfam PF01734 Patatin-like phospholipase 45 235 5.9E-28 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 M634_14875 05fb2fb876258d6d5bbe547dcd8f1ea2 771 Pfam PF07244 Surface antigen variable number repeat 355 425 3.4E-5 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 M634_14875 05fb2fb876258d6d5bbe547dcd8f1ea2 771 Gene3D G3DSA:3.40.1090.10 27 133 2.5E-28 T 12-10-2018 M634_14875 05fb2fb876258d6d5bbe547dcd8f1ea2 771 Gene3D G3DSA:3.40.1090.10 149 290 5.3E-17 T 12-10-2018 M634_21790 4bd98f1f75ec118b03cb9de8fd1eae75 150 Pfam PF09722 Protein of unknown function (DUF2384) 98 147 2.0E-14 T 12-10-2018 IPR024467 Domain of unknown function DUF2384 M634_21790 4bd98f1f75ec118b03cb9de8fd1eae75 150 TIGRFAM TIGR02293 TAS_TIGR02293: putative toxin-antitoxin system antitoxin component, TIGR02293 family 24 150 8.1E-32 T 12-10-2018 IPR011979 Conserved hypothetical protein CHP02293 M634_17710 cd69c119c876b8a44f740d4b07fdb619 318 Gene3D G3DSA:2.70.70.10 145 266 3.2E-42 T 12-10-2018 IPR011055 Duplicated hybrid motif M634_17710 cd69c119c876b8a44f740d4b07fdb619 318 Pfam PF01551 Peptidase family M23 170 265 1.9E-29 T 12-10-2018 IPR016047 Peptidase M23 M634_17710 cd69c119c876b8a44f740d4b07fdb619 318 SUPERFAMILY SSF51261 50 268 1.67E-51 T 12-10-2018 IPR011055 Duplicated hybrid motif M634_23460 a37b67675a9f96230c1df82a6c9705c8 534 SUPERFAMILY SSF52096 237 516 2.71E-84 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily M634_23460 a37b67675a9f96230c1df82a6c9705c8 534 Pfam PF01039 Carboxyl transferase domain 48 523 9.4E-150 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 M634_23460 a37b67675a9f96230c1df82a6c9705c8 534 Gene3D G3DSA:3.90.226.10 273 534 1.9E-100 T 12-10-2018 M634_23460 a37b67675a9f96230c1df82a6c9705c8 534 SUPERFAMILY SSF52096 23 269 1.76E-71 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily M634_23460 a37b67675a9f96230c1df82a6c9705c8 534 Gene3D G3DSA:3.90.226.10 1 269 5.1E-94 T 12-10-2018 M634_18320 ea2f39cbae75abece18dc6af5c772560 411 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 10 410 2.5E-134 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 M634_18320 ea2f39cbae75abece18dc6af5c772560 411 Pfam PF03616 Sodium/glutamate symporter 6 379 5.4E-151 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 M634_18320 ea2f39cbae75abece18dc6af5c772560 411 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 5 410 23.925 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 M634_05335 350d914ac001488152d8411f74f699e9 155 Pfam PF01029 NusB family 11 149 1.8E-35 T 12-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 M634_05335 350d914ac001488152d8411f74f699e9 155 SUPERFAMILY SSF48013 7 153 3.79E-39 T 12-10-2018 IPR035926 NusB-like superfamily M634_05335 350d914ac001488152d8411f74f699e9 155 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 8 153 23.117 T 12-10-2018 IPR011605 NusB antitermination factor GO:0006353 M634_05335 350d914ac001488152d8411f74f699e9 155 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 10 150 5.4E-43 T 12-10-2018 IPR011605 NusB antitermination factor GO:0006353 M634_05335 350d914ac001488152d8411f74f699e9 155 Gene3D G3DSA:1.10.940.10 3 155 6.1E-48 T 12-10-2018 IPR035926 NusB-like superfamily M634_15480 515170003381595f687df469bea2cfd2 141 SMART SM00732 3 104 3.9E-34 T 12-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 M634_15480 515170003381595f687df469bea2cfd2 141 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 6 136 1.6E-48 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 M634_15480 515170003381595f687df469bea2cfd2 141 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 3 139 24.052 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 M634_15480 515170003381595f687df469bea2cfd2 141 Gene3D G3DSA:3.30.420.140 1 138 6.1E-39 T 12-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 M634_15480 515170003381595f687df469bea2cfd2 141 SUPERFAMILY SSF53098 3 136 1.24E-36 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M634_15480 515170003381595f687df469bea2cfd2 141 Pfam PF03652 Holliday junction resolvase 4 136 1.6E-35 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 M634_11905 87112fcc5241bb583a45b0bac0957cda 170 Pfam PF13740 ACT domain 5 67 1.6E-10 T 12-10-2018 M634_11905 87112fcc5241bb583a45b0bac0957cda 170 SUPERFAMILY SSF55021 90 167 1.25E-9 T 12-10-2018 M634_11905 87112fcc5241bb583a45b0bac0957cda 170 Gene3D G3DSA:3.30.70.260 86 170 4.0E-13 T 12-10-2018 M634_11905 87112fcc5241bb583a45b0bac0957cda 170 Gene3D G3DSA:3.30.70.260 3 76 2.4E-5 T 12-10-2018 M634_11905 87112fcc5241bb583a45b0bac0957cda 170 PIRSF PIRSF028103 1 169 1.2E-43 T 12-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 M634_05085 d9dc034b8ff4958e159c977865baddd5 378 Pfam PF01764 Lipase (class 3) 73 203 7.4E-22 T 12-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 M634_05085 d9dc034b8ff4958e159c977865baddd5 378 Gene3D G3DSA:3.40.50.1820 56 269 7.9E-35 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_05085 d9dc034b8ff4958e159c977865baddd5 378 SUPERFAMILY SSF53474 37 218 3.49E-31 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_24545 7d5b2dde0dc97c6c24b787fb835910a2 212 Hamap MF_01389 Urease accessory protein UreG [ureG]. 11 209 47.671 T 12-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 M634_24545 7d5b2dde0dc97c6c24b787fb835910a2 212 SUPERFAMILY SSF52540 9 204 9.49E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_24545 7d5b2dde0dc97c6c24b787fb835910a2 212 PIRSF PIRSF005624 2 210 2.8E-52 T 12-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 M634_24545 7d5b2dde0dc97c6c24b787fb835910a2 212 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 13 204 6.5E-104 T 12-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 M634_24545 7d5b2dde0dc97c6c24b787fb835910a2 212 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 15 185 4.4E-41 T 12-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain M634_24545 7d5b2dde0dc97c6c24b787fb835910a2 212 Gene3D G3DSA:3.40.50.300 13 208 5.9E-52 T 12-10-2018 M634_19000 00f96f962e877f18c53c7ded545636ed 678 Pfam PF05787 Bacterial protein of unknown function (DUF839) 74 641 1.0E-152 T 12-10-2018 IPR008557 Protein of unknown function DUF839 M634_19000 00f96f962e877f18c53c7ded545636ed 678 SUPERFAMILY SSF63829 327 642 5.23E-6 T 12-10-2018 M634_21750 f2a49c3476f6f7b71d40d8907886141d 467 Pfam PF00939 Sodium:sulfate symporter transmembrane region 5 467 1.6E-142 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 M634_21750 f2a49c3476f6f7b71d40d8907886141d 467 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 22 461 1.3E-116 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 M634_21750 f2a49c3476f6f7b71d40d8907886141d 467 PIRSF PIRSF002457 2 467 5.7E-140 T 12-10-2018 IPR030676 Citrate carrier CitT-related M634_13065 17a6381d460c16f46b1f2726be4734e2 395 Pfam PF04865 Baseplate J-like protein 84 335 1.4E-33 T 12-10-2018 IPR006949 Baseplate protein J-like M634_03675 733c722f245e58a6207585326855d926 781 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 3 753 20.143 T 12-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 M634_03675 733c722f245e58a6207585326855d926 781 Gene3D G3DSA:2.60.450.10 49 99 3.9E-6 T 12-10-2018 M634_03675 733c722f245e58a6207585326855d926 781 Pfam PF04453 Organic solvent tolerance protein 297 682 1.9E-112 T 12-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 M634_03675 733c722f245e58a6207585326855d926 781 Pfam PF03968 OstA-like protein 58 189 2.9E-17 T 12-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal M634_23375 4d363779e9e5d5974502078f5499ad43 367 SUPERFAMILY SSF51395 2 362 4.51E-99 T 12-10-2018 M634_23375 4d363779e9e5d5974502078f5499ad43 367 Gene3D G3DSA:3.20.20.70 2 366 9.7E-109 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_23375 4d363779e9e5d5974502078f5499ad43 367 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 337 2.1E-68 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 M634_18430 920f66e22053a54ef81530c42bebc4d9 285 Gene3D G3DSA:3.40.50.1820 64 280 8.5E-31 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_18430 920f66e22053a54ef81530c42bebc4d9 285 Pfam PF12146 Serine aminopeptidase, S33 83 184 1.5E-11 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 M634_18430 920f66e22053a54ef81530c42bebc4d9 285 SUPERFAMILY SSF53474 33 268 1.1E-32 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_16685 5b3e7a72206b72d65caa608184b74b8e 3770 Pfam PF01345 Domain of unknown function DUF11 3360 3441 3.3E-6 T 12-10-2018 IPR001434 Domain of unknown function DUF11 M634_16685 5b3e7a72206b72d65caa608184b74b8e 3770 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 2402 2438 1.3E-5 T 12-10-2018 IPR001434 Domain of unknown function DUF11 M634_16685 5b3e7a72206b72d65caa608184b74b8e 3770 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 2947 2984 4.0E-6 T 12-10-2018 IPR001434 Domain of unknown function DUF11 M634_16685 5b3e7a72206b72d65caa608184b74b8e 3770 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 3083 3120 9.0E-4 T 12-10-2018 IPR001434 Domain of unknown function DUF11 M634_16685 5b3e7a72206b72d65caa608184b74b8e 3770 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 615 655 4.7E-6 T 12-10-2018 IPR001434 Domain of unknown function DUF11 M634_16685 5b3e7a72206b72d65caa608184b74b8e 3770 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1068 1104 3.2E-4 T 12-10-2018 IPR001434 Domain of unknown function DUF11 M634_16685 5b3e7a72206b72d65caa608184b74b8e 3770 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 3362 3410 1.1E-7 T 12-10-2018 IPR001434 Domain of unknown function DUF11 M634_16685 5b3e7a72206b72d65caa608184b74b8e 3770 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1365 1403 2.6E-4 T 12-10-2018 IPR001434 Domain of unknown function DUF11 M634_04395 37303fa4eb4cc519f46dfa6353fdcc3a 61 Pfam PF12065 Protein of unknown function (DUF3545) 1 60 9.2E-26 T 12-10-2018 IPR021932 Protein of unknown function DUF3545 M634_18870 648379a6a475269eba31dfa891dd2ac2 206 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 127 204 2.9E-17 T 12-10-2018 IPR006260 TonB/TolA, C-terminal M634_18870 648379a6a475269eba31dfa891dd2ac2 206 SUPERFAMILY SSF74653 119 196 7.98E-24 T 12-10-2018 M634_18870 648379a6a475269eba31dfa891dd2ac2 206 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 126 204 2.5E-20 T 12-10-2018 IPR037682 TonB, C-terminal GO:0055085 M634_18870 648379a6a475269eba31dfa891dd2ac2 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 121 142 1.4E-16 T 12-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 M634_18870 648379a6a475269eba31dfa891dd2ac2 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 63 73 1.4E-16 T 12-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 M634_18870 648379a6a475269eba31dfa891dd2ac2 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 161 178 1.4E-16 T 12-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 M634_18870 648379a6a475269eba31dfa891dd2ac2 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 142 160 1.4E-16 T 12-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 M634_18870 648379a6a475269eba31dfa891dd2ac2 206 Gene3D G3DSA:3.30.1150.10 103 205 3.8E-27 T 12-10-2018 M634_08415 3c169d7d3a8a7a9d3c7a5d3b91494982 473 Gene3D G3DSA:2.30.30.450 212 350 1.1E-55 T 12-10-2018 IPR038649 Exonuclease I, SH3-like domain superfamily M634_08415 3c169d7d3a8a7a9d3c7a5d3b91494982 473 Pfam PF00929 Exonuclease 11 190 3.1E-23 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III M634_08415 3c169d7d3a8a7a9d3c7a5d3b91494982 473 Pfam PF08411 Exonuclease C-terminal 210 469 2.2E-103 T 12-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 M634_08415 3c169d7d3a8a7a9d3c7a5d3b91494982 473 SUPERFAMILY SSF53098 7 471 4.69E-138 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M634_08415 3c169d7d3a8a7a9d3c7a5d3b91494982 473 PIRSF PIRSF000977 1 473 3.3E-196 T 12-10-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 M634_08415 3c169d7d3a8a7a9d3c7a5d3b91494982 473 SMART SM00479 8 201 0.0046 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III M634_08415 3c169d7d3a8a7a9d3c7a5d3b91494982 473 Gene3D G3DSA:3.30.420.10 1 199 2.5E-72 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M634_08415 3c169d7d3a8a7a9d3c7a5d3b91494982 473 Gene3D G3DSA:1.20.1280.70 357 418 3.2E-29 T 12-10-2018 M634_10465 0b45e79f5d45b663fe4fd42e9fd73c14 285 Gene3D G3DSA:3.40.1190.20 1 285 3.8E-86 T 12-10-2018 IPR029056 Ribokinase-like M634_10465 0b45e79f5d45b663fe4fd42e9fd73c14 285 SUPERFAMILY SSF53613 1 275 8.73E-70 T 12-10-2018 IPR029056 Ribokinase-like M634_10465 0b45e79f5d45b663fe4fd42e9fd73c14 285 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 284 4.3E-100 T 12-10-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 M634_10465 0b45e79f5d45b663fe4fd42e9fd73c14 285 Pfam PF08543 Phosphomethylpyrimidine kinase 76 253 3.7E-21 T 12-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 M634_00945 3b9601cd93fb44ad2b7266a119a607f2 329 SUPERFAMILY SSF55073 152 307 1.18E-48 T 12-10-2018 IPR029787 Nucleotide cyclase M634_00945 3b9601cd93fb44ad2b7266a119a607f2 329 Gene3D G3DSA:3.30.450.20 3 144 3.0E-10 T 12-10-2018 M634_00945 3b9601cd93fb44ad2b7266a119a607f2 329 SUPERFAMILY SSF55785 4 134 1.37E-7 T 12-10-2018 IPR035965 PAS domain superfamily M634_00945 3b9601cd93fb44ad2b7266a119a607f2 329 Pfam PF00990 Diguanylate cyclase, GGDEF domain 148 304 3.9E-44 T 12-10-2018 IPR000160 GGDEF domain M634_00945 3b9601cd93fb44ad2b7266a119a607f2 329 SMART SM00267 136 308 1.2E-51 T 12-10-2018 IPR000160 GGDEF domain M634_00945 3b9601cd93fb44ad2b7266a119a607f2 329 Gene3D G3DSA:3.30.70.270 145 311 2.8E-57 T 12-10-2018 M634_00945 3b9601cd93fb44ad2b7266a119a607f2 329 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 144 307 4.1E-50 T 12-10-2018 IPR000160 GGDEF domain M634_14890 34febf180f310462408addd7dacda6b6 238 Gene3D G3DSA:3.40.1350.60 81 237 5.9E-54 T 12-10-2018 M634_14890 34febf180f310462408addd7dacda6b6 238 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 4 229 1.9E-76 T 12-10-2018 IPR005224 Sugar fermentation stimulation protein M634_14890 34febf180f310462408addd7dacda6b6 238 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 238 56.373 T 12-10-2018 IPR005224 Sugar fermentation stimulation protein M634_14890 34febf180f310462408addd7dacda6b6 238 Pfam PF03749 Sugar fermentation stimulation protein 13 229 7.9E-75 T 12-10-2018 IPR005224 Sugar fermentation stimulation protein M634_14890 34febf180f310462408addd7dacda6b6 238 Gene3D G3DSA:2.40.50.580 1 80 2.6E-28 T 12-10-2018 M634_08940 92619d6e91a3d2d2d6220c0ff9714990 228 PIRSF PIRSF006171 3 228 3.3E-79 T 12-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 M634_08940 92619d6e91a3d2d2d6220c0ff9714990 228 Pfam PF00072 Response regulator receiver domain 7 118 7.2E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_08940 92619d6e91a3d2d2d6220c0ff9714990 228 SUPERFAMILY SSF52172 6 129 8.68E-31 T 12-10-2018 IPR011006 CheY-like superfamily M634_08940 92619d6e91a3d2d2d6220c0ff9714990 228 Gene3D G3DSA:3.40.50.2300 3 147 4.0E-26 T 12-10-2018 M634_08940 92619d6e91a3d2d2d6220c0ff9714990 228 SMART SM00448 5 118 4.7E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_08940 92619d6e91a3d2d2d6220c0ff9714990 228 Pfam PF12431 Transcriptional regulator 134 162 2.7E-8 T 12-10-2018 IPR028141 Transcriptional regulator M634_17595 cdf3ce32855b020b7f56115755b46c71 98 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 20 82 2.2E-15 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 M634_17595 cdf3ce32855b020b7f56115755b46c71 98 SUPERFAMILY SSF55604 23 95 6.15E-19 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 M634_17595 cdf3ce32855b020b7f56115755b46c71 98 Pfam PF00367 phosphotransferase system, EIIB 26 57 2.6E-10 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 M634_17595 cdf3ce32855b020b7f56115755b46c71 98 Gene3D G3DSA:3.30.1360.60 18 98 3.5E-22 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 M634_22885 2b43b4d4e8d9f59c49c328b10a0cb816 262 Pfam PF13462 Thioredoxin 83 229 8.4E-35 T 12-10-2018 IPR012336 Thioredoxin-like fold M634_22885 2b43b4d4e8d9f59c49c328b10a0cb816 262 Gene3D G3DSA:3.40.30.10 85 253 3.4E-58 T 12-10-2018 M634_22885 2b43b4d4e8d9f59c49c328b10a0cb816 262 SUPERFAMILY SSF52833 74 253 7.49E-42 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M634_22885 2b43b4d4e8d9f59c49c328b10a0cb816 262 Gene3D G3DSA:1.10.40.80 139 198 3.4E-58 T 12-10-2018 M634_10375 1a8474f669df1b2a534a84c8d79f25fb 360 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 14 359 4.4E-117 T 12-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 M634_10375 1a8474f669df1b2a534a84c8d79f25fb 360 Gene3D G3DSA:3.75.10.10 2 360 4.3E-133 T 12-10-2018 M634_10375 1a8474f669df1b2a534a84c8d79f25fb 360 Hamap MF_01841 Agmatine deiminase [aguA]. 5 360 59.652 T 12-10-2018 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 M634_10375 1a8474f669df1b2a534a84c8d79f25fb 360 SUPERFAMILY SSF55909 3 360 4.82E-135 T 12-10-2018 M634_10375 1a8474f669df1b2a534a84c8d79f25fb 360 TIGRFAM TIGR03380 agmatine_aguA: agmatine deiminase 5 360 1.2E-170 T 12-10-2018 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 M634_23620 2a770ed987770da8af7f28844c946dbe 137 Pfam PF09905 DNA-binding protein VF530 12 74 2.2E-31 T 12-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 M634_23620 2a770ed987770da8af7f28844c946dbe 137 Gene3D G3DSA:1.10.720.30 20 79 9.2E-27 T 12-10-2018 IPR036361 SAP domain superfamily M634_22115 4356ab893cd07e7564513842e886bfe0 382 Gene3D G3DSA:3.40.50.1970 1 180 2.3E-50 T 12-10-2018 M634_22115 4356ab893cd07e7564513842e886bfe0 382 Gene3D G3DSA:1.20.1090.10 181 380 1.3E-34 T 12-10-2018 M634_22115 4356ab893cd07e7564513842e886bfe0 382 SUPERFAMILY SSF56796 2 378 2.36E-98 T 12-10-2018 M634_22115 4356ab893cd07e7564513842e886bfe0 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 357 3.2E-83 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 M634_14480 c1e9c48c2f0f9db262491d1215cffdc7 438 SUPERFAMILY SSF52540 148 425 8.07E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_14480 c1e9c48c2f0f9db262491d1215cffdc7 438 SMART SM00382 167 358 0.0039 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_09910 085bfa14f2f43c4d91f5a65be52cdbbb 164 SUPERFAMILY SSF54001 46 162 1.91E-39 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily M634_09910 085bfa14f2f43c4d91f5a65be52cdbbb 164 Pfam PF00877 NlpC/P60 family 57 161 1.2E-30 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain M634_09910 085bfa14f2f43c4d91f5a65be52cdbbb 164 Gene3D G3DSA:3.90.1720.10 43 163 3.0E-40 T 12-10-2018 M634_01430 57fc021bac6f5e1188942f8485a88e7e 243 Gene3D G3DSA:3.30.450.40 52 227 1.1E-35 T 12-10-2018 IPR029016 GAF-like domain superfamily M634_01430 57fc021bac6f5e1188942f8485a88e7e 243 Pfam PF04340 Protein of unknown function, DUF484 15 225 1.6E-68 T 12-10-2018 IPR007435 Protein of unknown function DUF484 M634_15595 731e21c4927d95248fb29ec23fc4c816 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 3.0E-25 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M634_15595 731e21c4927d95248fb29ec23fc4c816 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 402 3.0E-25 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M634_15595 731e21c4927d95248fb29ec23fc4c816 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 3 28 3.0E-25 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M634_15595 731e21c4927d95248fb29ec23fc4c816 541 SMART SM00283 277 538 3.7E-70 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_15595 731e21c4927d95248fb29ec23fc4c816 541 SUPERFAMILY SSF58104 246 539 3.4E-69 T 12-10-2018 M634_15595 731e21c4927d95248fb29ec23fc4c816 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 326 502 1.1E-42 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_15595 731e21c4927d95248fb29ec23fc4c816 541 Gene3D G3DSA:1.10.287.950 218 540 1.1E-64 T 12-10-2018 M634_15595 731e21c4927d95248fb29ec23fc4c816 541 SMART SM01049 30 124 8.3E-20 T 12-10-2018 IPR033480 Single Cache domain 2 M634_15595 731e21c4927d95248fb29ec23fc4c816 541 Pfam PF17200 Single Cache domain 2 36 185 3.7E-34 T 12-10-2018 IPR033480 Single Cache domain 2 M634_15595 731e21c4927d95248fb29ec23fc4c816 541 Gene3D G3DSA:3.30.450.20 33 186 7.3E-31 T 12-10-2018 M634_20215 8e2462cedce42d22350e264e29c1fcdf 282 PIRSF PIRSF006232 3 282 7.2E-82 T 12-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 M634_20215 8e2462cedce42d22350e264e29c1fcdf 282 Gene3D G3DSA:2.60.120.10 143 249 7.1E-84 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M634_20215 8e2462cedce42d22350e264e29c1fcdf 282 SUPERFAMILY SSF51182 6 280 1.09E-71 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily M634_20215 8e2462cedce42d22350e264e29c1fcdf 282 Pfam PF02678 Pirin 24 121 8.5E-32 T 12-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 M634_20215 8e2462cedce42d22350e264e29c1fcdf 282 Pfam PF05726 Pirin C-terminal cupin domain 181 279 2.1E-26 T 12-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 M634_20215 8e2462cedce42d22350e264e29c1fcdf 282 Gene3D G3DSA:2.60.120.10 18 275 7.1E-84 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M634_18075 83eb47504c7ac83d473c73177ac6197d 270 SUPERFAMILY SSF46689 220 268 9.41E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_18075 83eb47504c7ac83d473c73177ac6197d 270 Gene3D G3DSA:1.10.10.60 217 269 3.3E-15 T 12-10-2018 M634_18075 83eb47504c7ac83d473c73177ac6197d 270 Gene3D G3DSA:1.10.10.60 169 216 1.6E-10 T 12-10-2018 M634_18075 83eb47504c7ac83d473c73177ac6197d 270 Pfam PF12833 Helix-turn-helix domain 189 267 7.8E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_18075 83eb47504c7ac83d473c73177ac6197d 270 SUPERFAMILY SSF46689 170 216 1.16E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_18075 83eb47504c7ac83d473c73177ac6197d 270 SMART SM00342 183 266 5.8E-29 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_18075 83eb47504c7ac83d473c73177ac6197d 270 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 235 250 3.5E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M634_18075 83eb47504c7ac83d473c73177ac6197d 270 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 250 266 3.5E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M634_04415 72dd478e53a5d6ce63d12f6142e03a30 239 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 9 239 53.141 T 12-10-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 M634_04415 72dd478e53a5d6ce63d12f6142e03a30 239 Gene3D G3DSA:3.40.50.150 7 235 5.3E-54 T 12-10-2018 M634_04415 72dd478e53a5d6ce63d12f6142e03a30 239 SUPERFAMILY SSF53335 35 190 1.12E-29 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_04415 72dd478e53a5d6ce63d12f6142e03a30 239 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 114 120 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 M634_04415 72dd478e53a5d6ce63d12f6142e03a30 239 Pfam PF05175 Methyltransferase small domain 42 129 2.2E-16 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 M634_22595 c74b9e587c72e37d93d1b57138ee5d6c 229 Gene3D G3DSA:1.10.3720.10 3 224 1.5E-59 T 12-10-2018 IPR035906 MetI-like superfamily M634_22595 c74b9e587c72e37d93d1b57138ee5d6c 229 SUPERFAMILY SSF161098 6 217 4.06E-49 T 12-10-2018 IPR035906 MetI-like superfamily M634_22595 c74b9e587c72e37d93d1b57138ee5d6c 229 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 10 219 2.3E-72 T 12-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 M634_22595 c74b9e587c72e37d93d1b57138ee5d6c 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 24 213 1.3E-21 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_14410 637864cb6d7ce5b57dd2a4cc3d4a969f 314 SUPERFAMILY SSF46785 15 93 4.42E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_14410 637864cb6d7ce5b57dd2a4cc3d4a969f 314 SUPERFAMILY SSF53850 102 307 8.51E-37 T 12-10-2018 M634_14410 637864cb6d7ce5b57dd2a4cc3d4a969f 314 Pfam PF03466 LysR substrate binding domain 108 297 6.6E-25 T 12-10-2018 IPR005119 LysR, substrate-binding M634_14410 637864cb6d7ce5b57dd2a4cc3d4a969f 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 78 2.1E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_14410 637864cb6d7ce5b57dd2a4cc3d4a969f 314 Gene3D G3DSA:3.40.190.10 183 281 2.4E-45 T 12-10-2018 M634_14410 637864cb6d7ce5b57dd2a4cc3d4a969f 314 Gene3D G3DSA:3.40.190.10 109 305 2.4E-45 T 12-10-2018 M634_14410 637864cb6d7ce5b57dd2a4cc3d4a969f 314 Gene3D G3DSA:1.10.10.10 11 99 8.7E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_23145 3b15ac74f0dd1fe9e9da15cfaf4f971a 713 Pfam PF00069 Protein kinase domain 90 322 1.7E-40 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 M634_23145 3b15ac74f0dd1fe9e9da15cfaf4f971a 713 SMART SM00220 90 373 9.9E-37 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 M634_23145 3b15ac74f0dd1fe9e9da15cfaf4f971a 713 SUPERFAMILY SSF56112 84 323 4.59E-57 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily M634_23145 3b15ac74f0dd1fe9e9da15cfaf4f971a 713 Gene3D G3DSA:1.10.510.10 171 410 5.0E-34 T 12-10-2018 M634_23145 3b15ac74f0dd1fe9e9da15cfaf4f971a 713 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 217 229 - T 12-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 M634_23145 3b15ac74f0dd1fe9e9da15cfaf4f971a 713 Gene3D G3DSA:3.30.200.20 78 170 7.1E-26 T 12-10-2018 M634_22345 84a64f9ec7ad23779691e7c1966c6cf9 818 Pfam PF02687 FtsX-like permease family 729 811 1.4E-5 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 M634_03305 f4391e6104c2106448fbc151e389915d 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.699 T 12-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03305 f4391e6104c2106448fbc151e389915d 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 12-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03305 f4391e6104c2106448fbc151e389915d 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 8.8E-40 T 12-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 M634_03305 f4391e6104c2106448fbc151e389915d 110 SUPERFAMILY SSF54843 1 109 9.42E-45 T 12-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 M634_03305 f4391e6104c2106448fbc151e389915d 110 Gene3D G3DSA:3.90.470.10 1 110 1.5E-48 T 12-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 M634_03305 f4391e6104c2106448fbc151e389915d 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 1.8E-50 T 12-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_23810 2ebd7310b3f450f44aecab62466f8999 210 Pfam PF13462 Thioredoxin 54 200 1.8E-6 T 12-10-2018 IPR012336 Thioredoxin-like fold M634_23810 2ebd7310b3f450f44aecab62466f8999 210 SUPERFAMILY SSF52833 28 207 7.78E-24 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M634_23810 2ebd7310b3f450f44aecab62466f8999 210 Gene3D G3DSA:3.40.30.10 24 208 4.0E-36 T 12-10-2018 M634_17985 ad7e1006ab7c7f0ed1dddebe7836bffc 325 Gene3D G3DSA:3.40.1190.20 1 320 1.8E-76 T 12-10-2018 IPR029056 Ribokinase-like M634_17985 ad7e1006ab7c7f0ed1dddebe7836bffc 325 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 269 282 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 M634_17985 ad7e1006ab7c7f0ed1dddebe7836bffc 325 Pfam PF00294 pfkB family carbohydrate kinase 1 314 6.0E-61 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB M634_17985 ad7e1006ab7c7f0ed1dddebe7836bffc 325 SUPERFAMILY SSF53613 1 314 9.82E-69 T 12-10-2018 IPR029056 Ribokinase-like M634_23540 19173f1eb4456322c232fa41d82bee3c 420 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 142 408 1.0E-11 T 12-10-2018 M634_23540 19173f1eb4456322c232fa41d82bee3c 420 Pfam PF13186 Iron-sulfur cluster-binding domain 291 347 2.7E-5 T 12-10-2018 IPR023885 4Fe4S-binding SPASM domain M634_23540 19173f1eb4456322c232fa41d82bee3c 420 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 290 374 3.8E-17 T 12-10-2018 IPR023885 4Fe4S-binding SPASM domain M634_23540 19173f1eb4456322c232fa41d82bee3c 420 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 13 393 1.8E-143 T 12-10-2018 M634_23540 19173f1eb4456322c232fa41d82bee3c 420 Pfam PF04055 Radical SAM superfamily 19 156 4.0E-7 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 M634_23540 19173f1eb4456322c232fa41d82bee3c 420 Gene3D G3DSA:3.20.20.70 10 395 1.2E-99 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_23540 19173f1eb4456322c232fa41d82bee3c 420 SUPERFAMILY SSF102114 18 357 2.49E-36 T 12-10-2018 M634_09630 c12f2f12aaf44d6a730f9b0be444291c 297 PIRSF PIRSF004976 2 282 3.6E-70 T 12-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 M634_09630 c12f2f12aaf44d6a730f9b0be444291c 297 Pfam PF01171 PP-loop family 41 203 4.5E-16 T 12-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 M634_09630 c12f2f12aaf44d6a730f9b0be444291c 297 SUPERFAMILY SSF52402 15 233 7.68E-54 T 12-10-2018 M634_09630 c12f2f12aaf44d6a730f9b0be444291c 297 Gene3D G3DSA:3.40.50.620 2 265 1.1E-48 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M634_09630 c12f2f12aaf44d6a730f9b0be444291c 297 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 8 269 56.371 T 12-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 M634_18445 38950305dc3d475e885c18f4784896e5 94 Gene3D G3DSA:2.60.120.10 1 94 7.5E-37 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M634_18445 38950305dc3d475e885c18f4784896e5 94 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 2 94 25.027 T 12-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 M634_18445 38950305dc3d475e885c18f4784896e5 94 Pfam PF06865 Protein of unknown function (DUF1255) 4 93 1.3E-33 T 12-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 M634_18445 38950305dc3d475e885c18f4784896e5 94 SUPERFAMILY SSF51182 3 94 2.22E-33 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily M634_05000 dd447382f6dd332008c9a556b0d2b311 331 Pfam PF04796 Plasmid encoded RepA protein 89 264 2.0E-30 T 12-10-2018 IPR006881 Plasmid encoded RepA protein M634_16920 ced049fed8b02cdc92adeb8bd78b7ce5 542 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 345 508 8.5E-41 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_16920 ced049fed8b02cdc92adeb8bd78b7ce5 542 SUPERFAMILY SSF58104 233 542 1.57E-71 T 12-10-2018 M634_16920 ced049fed8b02cdc92adeb8bd78b7ce5 542 Gene3D G3DSA:1.10.287.950 213 542 3.8E-72 T 12-10-2018 M634_16920 ced049fed8b02cdc92adeb8bd78b7ce5 542 SMART SM00283 280 541 2.8E-67 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_16920 ced049fed8b02cdc92adeb8bd78b7ce5 542 SMART SM00304 213 265 3.6E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_16920 ced049fed8b02cdc92adeb8bd78b7ce5 542 Pfam PF00672 HAMP domain 215 260 2.2E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 M634_01210 dac247f26ee620204ba95e73023d712c 624 Pfam PF00593 TonB dependent receptor 211 623 4.7E-44 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel M634_01210 dac247f26ee620204ba95e73023d712c 624 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 36 - T 12-10-2018 IPR010916 TonB box, conserved site M634_01210 dac247f26ee620204ba95e73023d712c 624 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 2 624 33.842 T 12-10-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0015420|GO:0015889|GO:0016020 M634_01210 dac247f26ee620204ba95e73023d712c 624 SUPERFAMILY SSF56935 29 624 3.55E-102 T 12-10-2018 M634_01210 dac247f26ee620204ba95e73023d712c 624 Gene3D G3DSA:2.40.170.20 156 624 1.3E-107 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily M634_01210 dac247f26ee620204ba95e73023d712c 624 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 148 2.2E-24 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain M634_01210 dac247f26ee620204ba95e73023d712c 624 Gene3D G3DSA:2.170.130.10 30 152 8.4E-31 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily M634_01210 dac247f26ee620204ba95e73023d712c 624 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 607 624 - T 12-10-2018 IPR010917 TonB-dependent receptor, conserved site M634_13110 3ae26a922424822f9a60da70575383b7 151 Pfam PF10772 Protein of unknown function (DUF2597) 8 141 2.2E-62 T 12-10-2018 IPR019708 Bacteriophage HP1, Orf24 M634_20810 fd84bc3b94c544fa334641532b941a92 297 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 281 1.5E-31 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 M634_03075 b028b7a635d720660360a53da8cb2704 253 Pfam PF06251 Capsule biosynthesis GfcC 34 246 5.0E-21 T 12-10-2018 IPR010425 Domain of unknown function DUF1017 M634_08490 7b0ee57aeabfb941e34392544021c795 289 Gene3D G3DSA:3.40.190.290 90 289 3.2E-47 T 12-10-2018 M634_08490 7b0ee57aeabfb941e34392544021c795 289 SUPERFAMILY SSF46785 1 85 2.95E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_08490 7b0ee57aeabfb941e34392544021c795 289 Pfam PF03466 LysR substrate binding domain 89 287 4.7E-44 T 12-10-2018 IPR005119 LysR, substrate-binding M634_08490 7b0ee57aeabfb941e34392544021c795 289 Gene3D G3DSA:1.10.10.10 1 83 4.2E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_08490 7b0ee57aeabfb941e34392544021c795 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_08490 7b0ee57aeabfb941e34392544021c795 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_08490 7b0ee57aeabfb941e34392544021c795 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_08490 7b0ee57aeabfb941e34392544021c795 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.9E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_08490 7b0ee57aeabfb941e34392544021c795 289 SUPERFAMILY SSF53850 90 288 8.11E-42 T 12-10-2018 M634_24520 f8ff9310d8829f1bc47aed87b2af38c6 608 SUPERFAMILY SSF49373 152 191 1.1E-5 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments M634_24520 f8ff9310d8829f1bc47aed87b2af38c6 608 Gene3D G3DSA:2.60.40.1080 379 465 2.9E-8 T 12-10-2018 M634_24520 f8ff9310d8829f1bc47aed87b2af38c6 608 SUPERFAMILY SSF49373 290 364 1.73E-7 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments M634_24520 f8ff9310d8829f1bc47aed87b2af38c6 608 Gene3D G3DSA:2.60.40.1080 288 378 9.0E-17 T 12-10-2018 M634_24520 f8ff9310d8829f1bc47aed87b2af38c6 608 Gene3D G3DSA:2.60.40.1080 114 202 2.3E-15 T 12-10-2018 M634_24520 f8ff9310d8829f1bc47aed87b2af38c6 608 SMART SM00635 384 461 18.0 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 M634_24520 f8ff9310d8829f1bc47aed87b2af38c6 608 SMART SM00635 203 284 11.0 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 M634_24520 f8ff9310d8829f1bc47aed87b2af38c6 608 SMART SM00635 290 371 1.4E-10 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 M634_24520 f8ff9310d8829f1bc47aed87b2af38c6 608 SMART SM00635 116 196 2.3E-6 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 M634_24520 f8ff9310d8829f1bc47aed87b2af38c6 608 Pfam PF02368 Bacterial Ig-like domain (group 2) 294 363 1.1E-7 T 12-10-2018 IPR003343 Bacterial Ig-like, group 2 M634_02940 b0d310375d97d952c03f985618f366c8 224 SUPERFAMILY SSF47781 17 91 2.51E-11 T 12-10-2018 IPR010994 RuvA domain 2-like M634_02940 b0d310375d97d952c03f985618f366c8 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 1.2E-77 T 12-10-2018 IPR001405 Uncharacterised protein family UPF0758 M634_02940 b0d310375d97d952c03f985618f366c8 224 SUPERFAMILY SSF102712 134 190 8.24E-5 T 12-10-2018 M634_02940 b0d310375d97d952c03f985618f366c8 224 Gene3D G3DSA:3.40.140.10 101 224 2.5E-43 T 12-10-2018 M634_02940 b0d310375d97d952c03f985618f366c8 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 12-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site M634_02940 b0d310375d97d952c03f985618f366c8 224 Pfam PF04002 RadC-like JAB domain 104 222 5.6E-45 T 12-10-2018 IPR025657 RadC-like JAB domain M634_02940 b0d310375d97d952c03f985618f366c8 224 Gene3D G3DSA:1.10.150.20 45 87 2.4E-5 T 12-10-2018 M634_23510 c704c7f54650a1992a8a24d31380c334 267 SUPERFAMILY SSF46689 215 264 7.17E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_23510 c704c7f54650a1992a8a24d31380c334 267 Pfam PF12833 Helix-turn-helix domain 185 262 9.9E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_23510 c704c7f54650a1992a8a24d31380c334 267 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 261 8.0E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M634_23510 c704c7f54650a1992a8a24d31380c334 267 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 230 245 8.0E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M634_23510 c704c7f54650a1992a8a24d31380c334 267 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 215 257 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 M634_23510 c704c7f54650a1992a8a24d31380c334 267 Gene3D G3DSA:1.10.10.60 160 265 1.5E-28 T 12-10-2018 M634_23510 c704c7f54650a1992a8a24d31380c334 267 SMART SM00342 179 261 9.6E-28 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_23510 c704c7f54650a1992a8a24d31380c334 267 SUPERFAMILY SSF51215 24 148 2.09E-6 T 12-10-2018 IPR037923 Transcription regulator HTH-like M634_09035 8967c8cfb60471a72e169aa0069fa4fe 208 Pfam PF09025 YopR, type III needle-polymerisation regulator 68 208 1.0E-65 T 12-10-2018 IPR013349 Type III secretion system effector YopR GO:0009405|GO:0030254|GO:0030257 M634_09035 8967c8cfb60471a72e169aa0069fa4fe 208 TIGRFAM TIGR02509 type_III_yopR: type III secretion effector, YopR family 81 207 1.9E-52 T 12-10-2018 IPR013349 Type III secretion system effector YopR GO:0009405|GO:0030254|GO:0030257 M634_09035 8967c8cfb60471a72e169aa0069fa4fe 208 SUPERFAMILY SSF140591 88 188 2.35E-8 T 12-10-2018 M634_05715 c2861ff5b86aa7bb98931454b1472fca 212 Gene3D G3DSA:2.50.20.10 32 211 9.4E-51 T 12-10-2018 M634_05715 c2861ff5b86aa7bb98931454b1472fca 212 SUPERFAMILY SSF89392 27 210 4.71E-49 T 12-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX M634_05715 c2861ff5b86aa7bb98931454b1472fca 212 Pfam PF03550 Outer membrane lipoprotein LolB 52 208 1.1E-42 T 12-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 M634_05715 c2861ff5b86aa7bb98931454b1472fca 212 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 15 209 2.5E-37 T 12-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 M634_05715 c2861ff5b86aa7bb98931454b1472fca 212 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 11 210 26.65 T 12-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 M634_13855 73611874a22ed276c12643357325f7e2 240 Pfam PF00929 Exonuclease 13 180 5.7E-38 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III M634_13855 73611874a22ed276c12643357325f7e2 240 SMART SM00479 11 189 4.4E-53 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III M634_13855 73611874a22ed276c12643357325f7e2 240 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 10 226 5.1E-82 T 12-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_13855 73611874a22ed276c12643357325f7e2 240 Gene3D G3DSA:3.30.420.10 4 194 2.0E-58 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M634_13855 73611874a22ed276c12643357325f7e2 240 SUPERFAMILY SSF53098 9 190 3.17E-54 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M634_13855 73611874a22ed276c12643357325f7e2 240 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 11 239 1.4E-97 T 12-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_10070 56c6abd3b58000501e80be21aa17f7c6 194 Gene3D G3DSA:3.40.50.360 1 194 1.0E-55 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M634_10070 56c6abd3b58000501e80be21aa17f7c6 194 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 194 31.804 T 12-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 M634_10070 56c6abd3b58000501e80be21aa17f7c6 194 Pfam PF02525 Flavodoxin-like fold 3 190 1.2E-43 T 12-10-2018 IPR003680 Flavodoxin-like fold M634_10070 56c6abd3b58000501e80be21aa17f7c6 194 SUPERFAMILY SSF52218 1 192 1.4E-50 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M634_07365 150c45288131ec19f55278e7cab04f4b 305 Gene3D G3DSA:3.40.50.10190 212 301 5.0E-12 T 12-10-2018 IPR036420 BRCT domain superfamily M634_07365 150c45288131ec19f55278e7cab04f4b 305 SUPERFAMILY SSF52113 212 266 1.94E-5 T 12-10-2018 IPR036420 BRCT domain superfamily M634_13715 a991eedaa687e0c7e89330b116e9482e 161 Pfam PF11143 Protein of unknown function (DUF2919) 3 147 7.4E-55 T 12-10-2018 IPR021318 Protein of unknown function DUF2919 M634_06070 79cc51074a7bf2be34f6f696916232f0 305 Gene3D G3DSA:3.40.50.720 2 304 9.9E-77 T 12-10-2018 M634_06070 79cc51074a7bf2be34f6f696916232f0 305 SUPERFAMILY SSF51735 1 300 1.21E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_06070 79cc51074a7bf2be34f6f696916232f0 305 Pfam PF08338 Domain of unknown function (DUF1731) 253 299 2.3E-15 T 12-10-2018 IPR013549 Domain of unknown function DUF1731 M634_06070 79cc51074a7bf2be34f6f696916232f0 305 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 225 3.7E-23 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 M634_06070 79cc51074a7bf2be34f6f696916232f0 305 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 296 1.0E-103 T 12-10-2018 IPR010099 Epimerase family protein SDR39U1 M634_24010 786317528f12e857aaa406afa39dab6d 172 SUPERFAMILY SSF158668 3 166 1.31E-50 T 12-10-2018 IPR038026 MtlR-like superfamily M634_24010 786317528f12e857aaa406afa39dab6d 172 Pfam PF05068 Mannitol repressor 4 166 3.3E-50 T 12-10-2018 IPR007761 Mannitol repressor MtlR-like M634_24010 786317528f12e857aaa406afa39dab6d 172 Gene3D G3DSA:1.20.120.330 1 168 3.2E-48 T 12-10-2018 M634_08740 0b60bdf64fa0d36a26d3487606db2da2 158 Pfam PF13673 Acetyltransferase (GNAT) domain 30 150 9.7E-19 T 12-10-2018 IPR000182 GNAT domain M634_08740 0b60bdf64fa0d36a26d3487606db2da2 158 SUPERFAMILY SSF55729 1 155 3.09E-36 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_08740 0b60bdf64fa0d36a26d3487606db2da2 158 Gene3D G3DSA:3.40.630.30 1 158 6.1E-43 T 12-10-2018 M634_02525 417b676b21dab9ef1b2c130ff0224e2e 144 Pfam PF00583 Acetyltransferase (GNAT) family 32 116 1.1E-8 T 12-10-2018 IPR000182 GNAT domain M634_02525 417b676b21dab9ef1b2c130ff0224e2e 144 SUPERFAMILY SSF55729 1 128 2.87E-20 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_02525 417b676b21dab9ef1b2c130ff0224e2e 144 Gene3D G3DSA:3.40.630.30 2 143 1.5E-17 T 12-10-2018 M634_06700 efcabeed6a1c0e099ca849bcaab3da4e 290 Pfam PF07466 Protein of unknown function (DUF1517) 28 125 1.3E-5 T 12-10-2018 IPR010903 Protein of unknown function DUF1517 M634_06700 efcabeed6a1c0e099ca849bcaab3da4e 290 SUPERFAMILY SSF54427 169 289 1.45E-16 T 12-10-2018 IPR032710 NTF2-like domain superfamily M634_06700 efcabeed6a1c0e099ca849bcaab3da4e 290 SMART SM00978 159 290 5.1E-36 T 12-10-2018 IPR007379 Tim44-like domain M634_06700 efcabeed6a1c0e099ca849bcaab3da4e 290 Pfam PF04280 Tim44-like domain 168 289 9.9E-15 T 12-10-2018 IPR007379 Tim44-like domain M634_06700 efcabeed6a1c0e099ca849bcaab3da4e 290 Gene3D G3DSA:3.10.450.240 166 290 5.8E-6 T 12-10-2018 M634_17600 b22e392b8eaf029ab75e6da30687f437 358 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 74 320 2.9E-49 T 12-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 M634_17600 b22e392b8eaf029ab75e6da30687f437 358 Pfam PF03193 RsgA GTPase 91 263 1.1E-48 T 12-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 M634_17600 b22e392b8eaf029ab75e6da30687f437 358 Gene3D G3DSA:3.40.50.300 94 263 3.2E-43 T 12-10-2018 M634_17600 b22e392b8eaf029ab75e6da30687f437 358 SUPERFAMILY SSF52540 108 324 2.23E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_17600 b22e392b8eaf029ab75e6da30687f437 358 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 40 327 31.389 T 12-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 M634_17600 b22e392b8eaf029ab75e6da30687f437 358 Gene3D G3DSA:1.10.40.50 266 338 4.3E-21 T 12-10-2018 M634_07500 aa887eb7cb708995f373da11a8d5aaaa 268 SUPERFAMILY SSF53335 20 207 1.67E-43 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_07500 aa887eb7cb708995f373da11a8d5aaaa 268 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 14 268 32.213 T 12-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 M634_07500 aa887eb7cb708995f373da11a8d5aaaa 268 Pfam PF08241 Methyltransferase domain 58 148 9.7E-24 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 M634_07500 aa887eb7cb708995f373da11a8d5aaaa 268 Gene3D G3DSA:3.40.50.150 21 214 5.3E-38 T 12-10-2018 M634_07500 aa887eb7cb708995f373da11a8d5aaaa 268 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 22 266 1.5E-67 T 12-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 M634_04550 884918cd09a5c50c8f522f3e641f2062 169 TIGRFAM TIGR00077 lspA: signal peptidase II 10 165 3.3E-49 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 M634_04550 884918cd09a5c50c8f522f3e641f2062 169 Pfam PF01252 Signal peptidase (SPase) II 19 161 9.0E-39 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 M634_04550 884918cd09a5c50c8f522f3e641f2062 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 106 121 8.3E-18 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 M634_04550 884918cd09a5c50c8f522f3e641f2062 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 142 158 8.3E-18 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 M634_04550 884918cd09a5c50c8f522f3e641f2062 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 58 66 8.3E-18 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 M634_04550 884918cd09a5c50c8f522f3e641f2062 169 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 10 167 16.676 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 M634_04550 884918cd09a5c50c8f522f3e641f2062 169 ProSitePatterns PS00855 Signal peptidases II signature. 109 121 - T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 M634_16125 ea003c353f103dd73c3e196f6be183e4 444 Pfam PF00999 Sodium/hydrogen exchanger family 14 416 8.1E-55 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 M634_11435 a20ae19365fdda18166d34626928447c 105 Pfam PF13876 Phage protein (N4 Gp49/phage Sf6 gene 66) family 27 101 1.3E-12 T 12-10-2018 IPR025915 Phage protein (N4 Gp49/phage Sf6 gene 66) family M634_21295 f6af8377a9dae18ce5a803175b3c6e76 192 Pfam PF14316 Domain of unknown function (DUF4381) 15 164 1.8E-25 T 12-10-2018 IPR025489 Protein of unknown function (DUF4381 M634_18365 19f9dbed5bf9767aa1dd70978539319d 299 Pfam PF03466 LysR substrate binding domain 126 278 1.8E-10 T 12-10-2018 IPR005119 LysR, substrate-binding M634_18365 19f9dbed5bf9767aa1dd70978539319d 299 Gene3D G3DSA:1.10.10.10 1 83 1.1E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_18365 19f9dbed5bf9767aa1dd70978539319d 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 4.4E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_18365 19f9dbed5bf9767aa1dd70978539319d 299 SUPERFAMILY SSF53850 90 279 4.71E-16 T 12-10-2018 M634_18365 19f9dbed5bf9767aa1dd70978539319d 299 Gene3D G3DSA:3.40.190.290 130 277 1.5E-5 T 12-10-2018 M634_18365 19f9dbed5bf9767aa1dd70978539319d 299 SUPERFAMILY SSF46785 1 81 1.19E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_18365 19f9dbed5bf9767aa1dd70978539319d 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.9E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_18365 19f9dbed5bf9767aa1dd70978539319d 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.9E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_18365 19f9dbed5bf9767aa1dd70978539319d 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.9E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_05750 317b53285557220cf2ec295c8961f06e 560 ProSitePatterns PS00785 5'-nucleotidase signature 1. 38 50 - T 12-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_05750 317b53285557220cf2ec295c8961f06e 560 Gene3D G3DSA:3.60.21.10 30 365 4.8E-125 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like M634_05750 317b53285557220cf2ec295c8961f06e 560 Pfam PF00149 Calcineurin-like phosphoesterase 38 259 2.2E-23 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 M634_05750 317b53285557220cf2ec295c8961f06e 560 Pfam PF02872 5'-nucleotidase, C-terminal domain 367 512 1.9E-34 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_05750 317b53285557220cf2ec295c8961f06e 560 PRINTS PR01607 Apyrase family signature 287 307 6.5E-52 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_05750 317b53285557220cf2ec295c8961f06e 560 PRINTS PR01607 Apyrase family signature 36 54 6.5E-52 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_05750 317b53285557220cf2ec295c8961f06e 560 PRINTS PR01607 Apyrase family signature 420 443 6.5E-52 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_05750 317b53285557220cf2ec295c8961f06e 560 PRINTS PR01607 Apyrase family signature 242 265 6.5E-52 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_05750 317b53285557220cf2ec295c8961f06e 560 PRINTS PR01607 Apyrase family signature 211 228 6.5E-52 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_05750 317b53285557220cf2ec295c8961f06e 560 PRINTS PR01607 Apyrase family signature 487 506 6.5E-52 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_05750 317b53285557220cf2ec295c8961f06e 560 Gene3D G3DSA:3.90.780.10 366 552 1.7E-58 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_05750 317b53285557220cf2ec295c8961f06e 560 SUPERFAMILY SSF56300 32 364 2.8E-95 T 12-10-2018 M634_05750 317b53285557220cf2ec295c8961f06e 560 ProSitePatterns PS00786 5'-nucleotidase signature 2. 113 124 - T 12-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_05750 317b53285557220cf2ec295c8961f06e 560 SUPERFAMILY SSF55816 366 542 1.96E-52 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 M634_05780 298bdbd71d62dab6f690d5405d5867fb 290 Pfam PF01963 TraB family 26 279 4.3E-53 T 12-10-2018 IPR002816 Pheromone shutdown, TraB M634_18265 684fb34856dfc296c28221e6bbc567aa 232 SUPERFAMILY SSF52540 1 223 4.92E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_18265 684fb34856dfc296c28221e6bbc567aa 232 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_18265 684fb34856dfc296c28221e6bbc567aa 232 Gene3D G3DSA:3.40.50.300 1 229 3.4E-67 T 12-10-2018 M634_18265 684fb34856dfc296c28221e6bbc567aa 232 SMART SM00382 30 217 2.1E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_18265 684fb34856dfc296c28221e6bbc567aa 232 Pfam PF00005 ABC transporter 21 169 5.7E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_05450 f03726e36f905d5ccae9c791685d04ca 344 Pfam PF00005 ABC transporter 21 169 1.1E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_05450 f03726e36f905d5ccae9c791685d04ca 344 Gene3D G3DSA:3.40.50.300 1 232 2.5E-74 T 12-10-2018 M634_05450 f03726e36f905d5ccae9c791685d04ca 344 SUPERFAMILY SSF52540 1 239 3.38E-83 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_05450 f03726e36f905d5ccae9c791685d04ca 344 SMART SM00930 265 340 9.3E-27 T 12-10-2018 IPR018449 NIL domain M634_05450 f03726e36f905d5ccae9c791685d04ca 344 SUPERFAMILY SSF55021 248 343 1.26E-25 T 12-10-2018 M634_05450 f03726e36f905d5ccae9c791685d04ca 344 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_05450 f03726e36f905d5ccae9c791685d04ca 344 Pfam PF09383 NIL domain 268 339 2.2E-20 T 12-10-2018 IPR018449 NIL domain M634_05450 f03726e36f905d5ccae9c791685d04ca 344 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 1.1E-198 T 12-10-2018 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 M634_05450 f03726e36f905d5ccae9c791685d04ca 344 SMART SM00382 30 235 7.6E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_05450 f03726e36f905d5ccae9c791685d04ca 344 Gene3D G3DSA:3.30.70.260 244 344 9.4E-42 T 12-10-2018 M634_16580 279e7d5ba16df5136bb6f161b28be3be 100 Gene3D G3DSA:3.40.50.2300 1 99 1.3E-37 T 12-10-2018 M634_16580 279e7d5ba16df5136bb6f161b28be3be 100 SUPERFAMILY SSF52794 2 94 2.09E-33 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 M634_16580 279e7d5ba16df5136bb6f161b28be3be 100 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 4 86 1.9E-31 T 12-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 M634_16580 279e7d5ba16df5136bb6f161b28be3be 100 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 94 2.9E-17 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 M634_01665 5fe9ab6a55d9370a22068fb016aad648 444 Gene3D G3DSA:3.20.20.70 218 434 6.8E-52 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_01665 5fe9ab6a55d9370a22068fb016aad648 444 SUPERFAMILY SSF51391 225 429 2.22E-58 T 12-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 M634_01665 5fe9ab6a55d9370a22068fb016aad648 444 Pfam PF02581 Thiamine monophosphate synthase 235 412 2.2E-50 T 12-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 M634_07740 4f51683fa835d7f31c286c0899de3362 301 SMART SM01131 178 300 2.2E-33 T 12-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 M634_07740 4f51683fa835d7f31c286c0899de3362 301 Pfam PF01368 DHH family 2 142 4.0E-22 T 12-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 M634_07740 4f51683fa835d7f31c286c0899de3362 301 Gene3D G3DSA:3.90.1640.10 1 186 1.8E-63 T 12-10-2018 M634_07740 4f51683fa835d7f31c286c0899de3362 301 Gene3D G3DSA:3.10.310.20 187 301 3.1E-22 T 12-10-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 M634_07740 4f51683fa835d7f31c286c0899de3362 301 Pfam PF02833 DHHA2 domain 180 297 2.7E-15 T 12-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 M634_07740 4f51683fa835d7f31c286c0899de3362 301 SUPERFAMILY SSF64182 1 298 4.97E-67 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily M634_06115 575d0efb60d1b3568005bb29f01e2003 292 Pfam PF00486 Transcriptional regulatory protein, C terminal 31 107 1.0E-19 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_06115 575d0efb60d1b3568005bb29f01e2003 292 SUPERFAMILY SSF46894 9 107 1.9E-18 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M634_06115 575d0efb60d1b3568005bb29f01e2003 292 SMART SM00862 30 107 2.9E-18 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_06115 575d0efb60d1b3568005bb29f01e2003 292 Gene3D G3DSA:1.10.10.10 5 107 4.9E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_19360 a6a2af45b1ca46490db66de60ed383f6 136 Gene3D G3DSA:3.40.630.30 1 134 2.6E-33 T 12-10-2018 M634_19360 a6a2af45b1ca46490db66de60ed383f6 136 Pfam PF13673 Acetyltransferase (GNAT) domain 33 133 9.6E-16 T 12-10-2018 IPR000182 GNAT domain M634_19360 a6a2af45b1ca46490db66de60ed383f6 136 SUPERFAMILY SSF55729 7 121 7.43E-23 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_02630 d5d7018bd76d1123cabfcb3484b6aed4 144 Gene3D G3DSA:3.50.80.10 1 144 2.9E-53 T 12-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily M634_02630 d5d7018bd76d1123cabfcb3484b6aed4 144 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 144 2.9E-63 T 12-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 M634_02630 d5d7018bd76d1123cabfcb3484b6aed4 144 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 144 32.422 T 12-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 M634_02630 d5d7018bd76d1123cabfcb3484b6aed4 144 SUPERFAMILY SSF69500 2 143 5.23E-53 T 12-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily M634_02630 d5d7018bd76d1123cabfcb3484b6aed4 144 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 142 1.0E-50 T 12-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 M634_01360 94844aba25a3cd38059fa15a1727cc93 405 Pfam PF07690 Major Facilitator Superfamily 18 339 1.3E-18 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M634_01360 94844aba25a3cd38059fa15a1727cc93 405 Gene3D G3DSA:1.20.1250.20 207 401 6.5E-11 T 12-10-2018 M634_01360 94844aba25a3cd38059fa15a1727cc93 405 Gene3D G3DSA:1.20.1250.20 8 200 2.4E-14 T 12-10-2018 M634_01360 94844aba25a3cd38059fa15a1727cc93 405 SUPERFAMILY SSF103473 9 399 6.93E-32 T 12-10-2018 IPR036259 MFS transporter superfamily M634_22070 534d52866f76a80e29fe63f5bfad3fb1 272 SMART SM00062 39 262 1.5E-44 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M634_22070 534d52866f76a80e29fe63f5bfad3fb1 272 SMART SM00079 39 261 0.0032 T 12-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 M634_22070 534d52866f76a80e29fe63f5bfad3fb1 272 Gene3D G3DSA:3.40.190.10 125 216 7.6E-62 T 12-10-2018 M634_22070 534d52866f76a80e29fe63f5bfad3fb1 272 SUPERFAMILY SSF53850 7 259 6.52E-58 T 12-10-2018 M634_22070 534d52866f76a80e29fe63f5bfad3fb1 272 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 260 6.0E-51 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF M634_22070 534d52866f76a80e29fe63f5bfad3fb1 272 Gene3D G3DSA:3.40.190.10 32 249 7.6E-62 T 12-10-2018 M634_19625 3a1181bf1668916be909eac97bbd0369 356 Gene3D G3DSA:3.20.20.70 3 352 5.5E-107 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_19625 3a1181bf1668916be909eac97bbd0369 356 Pfam PF03060 Nitronate monooxygenase 7 346 1.7E-70 T 12-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 M634_19625 3a1181bf1668916be909eac97bbd0369 356 SUPERFAMILY SSF51412 10 332 9.92E-61 T 12-10-2018 M634_23125 9920414d7d79089dfe697bca51cd2a2b 441 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 439 2.3E-123 T 12-10-2018 IPR010263 Type VI secretion protein, VC_A0114 M634_23125 9920414d7d79089dfe697bca51cd2a2b 441 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 6 441 5.9E-144 T 12-10-2018 IPR010263 Type VI secretion protein, VC_A0114 M634_04090 29ea4c44e959357c4f7dbb8975fe97c5 367 Gene3D G3DSA:3.40.50.300 17 191 4.6E-22 T 12-10-2018 M634_04090 29ea4c44e959357c4f7dbb8975fe97c5 367 Pfam PF03969 AFG1-like ATPase 1 364 9.2E-153 T 12-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 M634_04090 29ea4c44e959357c4f7dbb8975fe97c5 367 SUPERFAMILY SSF52540 62 201 1.17E-14 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_04090 29ea4c44e959357c4f7dbb8975fe97c5 367 Hamap MF_01919 Cell division protein ZapE [zapE]. 1 367 52.787 T 12-10-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 M634_20950 5240e694b959d6495bb583f434211cfc 258 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 M634_20950 5240e694b959d6495bb583f434211cfc 258 SUPERFAMILY SSF52096 3 257 2.21E-76 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily M634_20950 5240e694b959d6495bb583f434211cfc 258 Gene3D G3DSA:3.90.226.10 1 258 1.5E-79 T 12-10-2018 M634_20950 5240e694b959d6495bb583f434211cfc 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 257 1.5E-57 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 M634_23670 63ecead99bf440d6b858aa753eb72f58 292 Pfam PF03466 LysR substrate binding domain 108 287 6.0E-16 T 12-10-2018 IPR005119 LysR, substrate-binding M634_23670 63ecead99bf440d6b858aa753eb72f58 292 Gene3D G3DSA:1.10.10.10 1 93 4.6E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_23670 63ecead99bf440d6b858aa753eb72f58 292 SUPERFAMILY SSF46785 1 86 2.18E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_23670 63ecead99bf440d6b858aa753eb72f58 292 SUPERFAMILY SSF53850 92 289 2.71E-23 T 12-10-2018 M634_23670 63ecead99bf440d6b858aa753eb72f58 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 8.4E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_23670 63ecead99bf440d6b858aa753eb72f58 292 Gene3D G3DSA:3.40.190.290 94 282 1.2E-34 T 12-10-2018 M634_10110 d17b11127c58288f01ae4da139a89666 649 Gene3D G3DSA:3.60.21.70 314 560 5.4E-10 T 12-10-2018 IPR038607 PhoD-like superfamily M634_10110 d17b11127c58288f01ae4da139a89666 649 SUPERFAMILY SSF56300 152 556 2.55E-11 T 12-10-2018 M634_07445 326bb5dbc8f43917cd6ffffb39abc121 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 6.2E-22 T 12-10-2018 M634_07445 326bb5dbc8f43917cd6ffffb39abc121 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 9.1E-23 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M634_07445 326bb5dbc8f43917cd6ffffb39abc121 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 9.1E-23 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M634_07445 326bb5dbc8f43917cd6ffffb39abc121 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 9.1E-23 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M634_07445 326bb5dbc8f43917cd6ffffb39abc121 164 Gene3D G3DSA:1.10.10.10 1 63 5.8E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_07445 326bb5dbc8f43917cd6ffffb39abc121 164 SMART SM00344 12 121 3.2E-55 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 M634_07445 326bb5dbc8f43917cd6ffffb39abc121 164 SUPERFAMILY SSF54909 74 157 1.02E-21 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel M634_07445 326bb5dbc8f43917cd6ffffb39abc121 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 12-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site M634_07445 326bb5dbc8f43917cd6ffffb39abc121 164 Gene3D G3DSA:3.30.70.920 64 159 5.0E-24 T 12-10-2018 M634_07445 326bb5dbc8f43917cd6ffffb39abc121 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 1.6E-23 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain M634_07445 326bb5dbc8f43917cd6ffffb39abc121 164 SUPERFAMILY SSF46785 12 70 2.33E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_23850 0755e58db8b046b00696630d9bcd92a1 179 SUPERFAMILY SSF110111 55 174 2.75E-47 T 12-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23850 0755e58db8b046b00696630d9bcd92a1 179 PIRSF PIRSF005413 1 178 3.1E-67 T 12-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23850 0755e58db8b046b00696630d9bcd92a1 179 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 28 172 1.4E-49 T 12-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23850 0755e58db8b046b00696630d9bcd92a1 179 Gene3D G3DSA:2.60.370.10 54 177 1.2E-43 T 12-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_07045 c2e886e147fa639bb1b768acd5fa06ec 225 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 24 221 2.0E-41 T 12-10-2018 IPR018635 Uncharacterised protein family UPF0319 M634_07045 c2e886e147fa639bb1b768acd5fa06ec 225 Hamap MF_00789 UPF0319 protein YccT [yccT]. 5 224 22.683 T 12-10-2018 IPR018635 Uncharacterised protein family UPF0319 M634_09410 28c2c181687bf4bddb007d9c79e2ad1d 320 Pfam PF04403 Paraquat-inducible protein A 153 308 1.1E-47 T 12-10-2018 IPR007498 Intermembrane transport protein PqiA-like M634_09410 28c2c181687bf4bddb007d9c79e2ad1d 320 Pfam PF04403 Paraquat-inducible protein A 1 110 4.2E-24 T 12-10-2018 IPR007498 Intermembrane transport protein PqiA-like M634_09410 28c2c181687bf4bddb007d9c79e2ad1d 320 SUPERFAMILY SSF48695 117 157 4.56E-5 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily M634_09410 28c2c181687bf4bddb007d9c79e2ad1d 320 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 3 307 3.2E-88 T 12-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type M634_21645 6beb87f8078b959b28619d8d97157265 456 Gene3D G3DSA:3.30.70.270 305 456 3.3E-38 T 12-10-2018 M634_21645 6beb87f8078b959b28619d8d97157265 456 SMART SM00267 296 456 9.2E-33 T 12-10-2018 IPR000160 GGDEF domain M634_21645 6beb87f8078b959b28619d8d97157265 456 SUPERFAMILY SSF55073 310 452 1.33E-32 T 12-10-2018 IPR029787 Nucleotide cyclase M634_21645 6beb87f8078b959b28619d8d97157265 456 Pfam PF00990 Diguanylate cyclase, GGDEF domain 307 453 9.7E-34 T 12-10-2018 IPR000160 GGDEF domain M634_21645 6beb87f8078b959b28619d8d97157265 456 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 306 453 4.4E-35 T 12-10-2018 IPR000160 GGDEF domain M634_13350 d7a051d32065c47c98e6c9fc6391fdd9 264 Gene3D G3DSA:3.30.70.580 1 104 5.0E-40 T 12-10-2018 M634_13350 d7a051d32065c47c98e6c9fc6391fdd9 264 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 34.572 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 M634_13350 d7a051d32065c47c98e6c9fc6391fdd9 264 Gene3D G3DSA:3.30.70.660 105 242 1.1E-48 T 12-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 M634_13350 d7a051d32065c47c98e6c9fc6391fdd9 264 PIRSF PIRSF001430 1 254 6.3E-77 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 M634_13350 d7a051d32065c47c98e6c9fc6391fdd9 264 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 5.1E-73 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 M634_13350 d7a051d32065c47c98e6c9fc6391fdd9 264 SUPERFAMILY SSF55120 1 257 6.04E-94 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 M634_13350 d7a051d32065c47c98e6c9fc6391fdd9 264 Pfam PF01416 tRNA pseudouridine synthase 8 102 2.0E-10 T 12-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 M634_13350 d7a051d32065c47c98e6c9fc6391fdd9 264 Pfam PF01416 tRNA pseudouridine synthase 144 244 4.6E-29 T 12-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 M634_22090 b78a7c2c372531c762cce9242aaba1ce 459 Gene3D G3DSA:1.20.1250.20 20 221 2.3E-38 T 12-10-2018 M634_22090 b78a7c2c372531c762cce9242aaba1ce 459 PIRSF PIRSF002808 12 452 8.2E-104 T 12-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 M634_22090 b78a7c2c372531c762cce9242aaba1ce 459 Gene3D G3DSA:1.20.1250.20 242 443 7.4E-33 T 12-10-2018 M634_22090 b78a7c2c372531c762cce9242aaba1ce 459 Pfam PF07690 Major Facilitator Superfamily 37 391 6.3E-40 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M634_22090 b78a7c2c372531c762cce9242aaba1ce 459 SUPERFAMILY SSF103473 18 450 2.22E-64 T 12-10-2018 IPR036259 MFS transporter superfamily M634_05435 7dde9f978f318783341febf8e1dce873 258 PIRSF PIRSF029037 1 258 6.2E-116 T 12-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 M634_05435 7dde9f978f318783341febf8e1dce873 258 Pfam PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) 1 256 1.1E-114 T 12-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 M634_00820 c66a7a9656b6df2930b1712101f3170c 159 Pfam PF00588 SpoU rRNA Methylase family 3 146 4.1E-34 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 M634_00820 c66a7a9656b6df2930b1712101f3170c 159 SUPERFAMILY SSF75217 2 157 2.94E-43 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases M634_00820 c66a7a9656b6df2930b1712101f3170c 159 Gene3D G3DSA:3.40.1280.10 1 159 9.3E-65 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal M634_00820 c66a7a9656b6df2930b1712101f3170c 159 PIRSF PIRSF029256 1 159 2.6E-66 T 12-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 M634_00820 c66a7a9656b6df2930b1712101f3170c 159 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 157 1.1E-58 T 12-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 M634_00820 c66a7a9656b6df2930b1712101f3170c 159 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 156 32.755 T 12-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 M634_21215 cec9542d79492c63fc9b74450384fab7 717 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 10 712 0.0 T 12-10-2018 IPR010019 Integral membrane protein, YccS M634_21215 cec9542d79492c63fc9b74450384fab7 717 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 10 711 9.9E-244 T 12-10-2018 IPR010020 Integral membrane protein, YccS/YhfK M634_21215 cec9542d79492c63fc9b74450384fab7 717 Pfam PF12805 FUSC-like inner membrane protein yccS 68 348 4.6E-114 T 12-10-2018 IPR032692 Integral membrane protein YccS, N-terminal M634_21215 cec9542d79492c63fc9b74450384fab7 717 Pfam PF13515 Fusaric acid resistance protein-like 405 524 1.2E-22 T 12-10-2018 M634_09960 b867bb863be71332b793d6659f213083 106 Gene3D G3DSA:3.30.750.24 2 105 1.3E-17 T 12-10-2018 IPR036513 STAS domain superfamily M634_09960 b867bb863be71332b793d6659f213083 106 SUPERFAMILY SSF52091 6 101 7.46E-20 T 12-10-2018 IPR036513 STAS domain superfamily M634_09960 b867bb863be71332b793d6659f213083 106 Pfam PF13466 STAS domain 17 95 1.4E-9 T 12-10-2018 IPR002645 STAS domain M634_06595 5f4ed8be549056570a84855eeb5d2155 208 Gene3D G3DSA:3.90.226.10 4 207 2.7E-85 T 12-10-2018 M634_06595 5f4ed8be549056570a84855eeb5d2155 208 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 15 205 1.2E-107 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 M634_06595 5f4ed8be549056570a84855eeb5d2155 208 SUPERFAMILY SSF52096 23 206 8.42E-76 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily M634_06595 5f4ed8be549056570a84855eeb5d2155 208 Pfam PF00574 Clp protease 25 205 1.5E-89 T 12-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA M634_06595 5f4ed8be549056570a84855eeb5d2155 208 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 12-10-2018 IPR018215 ClpP, Ser active site M634_06595 5f4ed8be549056570a84855eeb5d2155 208 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 2.6E-54 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 M634_06595 5f4ed8be549056570a84855eeb5d2155 208 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 2.6E-54 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 M634_06595 5f4ed8be549056570a84855eeb5d2155 208 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 2.6E-54 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 M634_06595 5f4ed8be549056570a84855eeb5d2155 208 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 2.6E-54 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 M634_06595 5f4ed8be549056570a84855eeb5d2155 208 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 2.6E-54 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 M634_06595 5f4ed8be549056570a84855eeb5d2155 208 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 44.409 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 M634_06595 5f4ed8be549056570a84855eeb5d2155 208 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 12-10-2018 IPR033135 ClpP, histidine active site M634_05910 80e68b11842c5dc18288dd8d11b271f7 262 Pfam PF00460 Flagella basal body rod protein 5 35 3.6E-12 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 M634_05910 80e68b11842c5dc18288dd8d11b271f7 262 SUPERFAMILY SSF117143 93 223 6.67E-35 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like M634_05910 80e68b11842c5dc18288dd8d11b271f7 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 147 244 1.6E-30 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G M634_05910 80e68b11842c5dc18288dd8d11b271f7 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 137 5.4E-41 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G M634_05910 80e68b11842c5dc18288dd8d11b271f7 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 184 260 9.1E-24 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain M634_05910 80e68b11842c5dc18288dd8d11b271f7 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 261 8.0E-118 T 12-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 M634_05910 80e68b11842c5dc18288dd8d11b271f7 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site M634_17570 5caa4addf5690d67dc5d2c2e071cc5f1 902 SUPERFAMILY SSF46894 831 894 9.52E-17 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M634_17570 5caa4addf5690d67dc5d2c2e071cc5f1 902 Hamap MF_01247 HTH-type transcriptional regulator MalT [malT]. 1 902 38.725 T 12-10-2018 IPR023768 Transcriptional regulator HTH-type, MalT M634_17570 5caa4addf5690d67dc5d2c2e071cc5f1 902 SUPERFAMILY SSF52540 14 230 2.77E-11 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_17570 5caa4addf5690d67dc5d2c2e071cc5f1 902 Gene3D G3DSA:3.40.50.300 12 165 4.6E-7 T 12-10-2018 M634_17570 5caa4addf5690d67dc5d2c2e071cc5f1 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 869 881 1.3E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_17570 5caa4addf5690d67dc5d2c2e071cc5f1 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 853 869 1.3E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_17570 5caa4addf5690d67dc5d2c2e071cc5f1 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 839 853 1.3E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_17570 5caa4addf5690d67dc5d2c2e071cc5f1 902 Gene3D G3DSA:1.25.40.10 445 811 6.7E-83 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_17570 5caa4addf5690d67dc5d2c2e071cc5f1 902 Gene3D G3DSA:1.10.10.10 829 900 8.3E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_17570 5caa4addf5690d67dc5d2c2e071cc5f1 902 SMART SM00421 836 893 5.8E-20 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_17570 5caa4addf5690d67dc5d2c2e071cc5f1 902 ProSitePatterns PS00622 LuxR-type HTH domain signature. 853 880 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_17570 5caa4addf5690d67dc5d2c2e071cc5f1 902 Pfam PF00196 Bacterial regulatory proteins, luxR family 838 893 1.3E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_17570 5caa4addf5690d67dc5d2c2e071cc5f1 902 SUPERFAMILY SSF48452 442 805 3.0E-156 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_06150 45eb3211743a1911d8907602d0e150de 529 SUPERFAMILY SSF51735 387 517 3.38E-15 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_06150 45eb3211743a1911d8907602d0e150de 529 Gene3D G3DSA:3.40.50.720 379 529 3.5E-34 T 12-10-2018 M634_06150 45eb3211743a1911d8907602d0e150de 529 Gene3D G3DSA:1.20.1530.20 2 361 6.2E-46 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily M634_06150 45eb3211743a1911d8907602d0e150de 529 Pfam PF00999 Sodium/hydrogen exchanger family 3 349 6.0E-40 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 M634_06150 45eb3211743a1911d8907602d0e150de 529 Pfam PF02254 TrkA-N domain 388 504 6.0E-19 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 M634_23895 8c57018fad9425baba6b813337dce4ad 204 Gene3D G3DSA:3.90.850.10 7 202 1.3E-46 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 M634_23895 8c57018fad9425baba6b813337dce4ad 204 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 15 186 2.3E-28 T 12-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 M634_23895 8c57018fad9425baba6b813337dce4ad 204 SUPERFAMILY SSF56529 12 187 1.57E-47 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 M634_23640 da322a12511773927c613395b2ca6520 122 Pfam PF08888 HopJ type III effector protein 11 119 1.7E-48 T 12-10-2018 IPR014984 HopJ type III effector protein M634_23640 da322a12511773927c613395b2ca6520 122 Gene3D G3DSA:3.20.160.10 1 122 2.8E-54 T 12-10-2018 IPR038604 Type III effector HopJ superfamily M634_12805 aaf71593c87290a582bd021c7ebc5939 601 Pfam PF01935 Domain of unknown function DUF87 129 273 9.5E-17 T 12-10-2018 IPR002789 Helicase HerA, central domain M634_12805 aaf71593c87290a582bd021c7ebc5939 601 Gene3D G3DSA:3.40.50.300 387 586 7.3E-42 T 12-10-2018 M634_12805 aaf71593c87290a582bd021c7ebc5939 601 Gene3D G3DSA:3.40.50.300 112 286 2.0E-23 T 12-10-2018 M634_12805 aaf71593c87290a582bd021c7ebc5939 601 SUPERFAMILY SSF52540 127 576 1.95E-29 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_22390 6f29d10c66ac812f9340042272cdbbf9 295 SUPERFAMILY SSF53850 106 292 5.07E-18 T 12-10-2018 M634_22390 6f29d10c66ac812f9340042272cdbbf9 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 3.5E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_22390 6f29d10c66ac812f9340042272cdbbf9 295 Gene3D G3DSA:3.40.190.290 96 282 8.8E-10 T 12-10-2018 M634_22390 6f29d10c66ac812f9340042272cdbbf9 295 SUPERFAMILY SSF46785 5 84 7.39E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_22390 6f29d10c66ac812f9340042272cdbbf9 295 Gene3D G3DSA:1.10.10.10 5 90 5.6E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_22390 6f29d10c66ac812f9340042272cdbbf9 295 Pfam PF03466 LysR substrate binding domain 122 291 1.8E-13 T 12-10-2018 IPR005119 LysR, substrate-binding M634_13875 3b68a8f561fb794ac4d631f1f72afd24 528 SUPERFAMILY SSF54106 345 388 7.06E-11 T 12-10-2018 M634_13875 3b68a8f561fb794ac4d631f1f72afd24 528 SMART SM00257 345 388 3.6E-14 T 12-10-2018 IPR018392 LysM domain M634_13875 3b68a8f561fb794ac4d631f1f72afd24 528 SMART SM00257 476 520 1.8E-9 T 12-10-2018 IPR018392 LysM domain M634_13875 3b68a8f561fb794ac4d631f1f72afd24 528 SMART SM00257 419 463 6.1E-13 T 12-10-2018 IPR018392 LysM domain M634_13875 3b68a8f561fb794ac4d631f1f72afd24 528 Gene3D G3DSA:3.10.350.10 474 522 8.8E-13 T 12-10-2018 IPR036779 LysM domain superfamily M634_13875 3b68a8f561fb794ac4d631f1f72afd24 528 Gene3D G3DSA:1.10.530.10 110 263 2.9E-29 T 12-10-2018 M634_13875 3b68a8f561fb794ac4d631f1f72afd24 528 SUPERFAMILY SSF54106 419 463 7.46E-11 T 12-10-2018 M634_13875 3b68a8f561fb794ac4d631f1f72afd24 528 Pfam PF01464 Transglycosylase SLT domain 127 228 8.6E-23 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 M634_13875 3b68a8f561fb794ac4d631f1f72afd24 528 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 135 163 - T 12-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 M634_13875 3b68a8f561fb794ac4d631f1f72afd24 528 SUPERFAMILY SSF53955 114 271 8.72E-42 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily M634_13875 3b68a8f561fb794ac4d631f1f72afd24 528 Pfam PF01476 LysM domain 420 463 1.3E-11 T 12-10-2018 IPR018392 LysM domain M634_13875 3b68a8f561fb794ac4d631f1f72afd24 528 Pfam PF01476 LysM domain 346 388 2.5E-13 T 12-10-2018 IPR018392 LysM domain M634_13875 3b68a8f561fb794ac4d631f1f72afd24 528 Pfam PF01476 LysM domain 477 519 1.2E-10 T 12-10-2018 IPR018392 LysM domain M634_13875 3b68a8f561fb794ac4d631f1f72afd24 528 Gene3D G3DSA:3.10.350.10 331 399 8.2E-16 T 12-10-2018 IPR036779 LysM domain superfamily M634_13875 3b68a8f561fb794ac4d631f1f72afd24 528 Gene3D G3DSA:3.10.350.10 404 471 4.1E-15 T 12-10-2018 IPR036779 LysM domain superfamily M634_13875 3b68a8f561fb794ac4d631f1f72afd24 528 SUPERFAMILY SSF54106 474 521 7.72E-10 T 12-10-2018 M634_20375 e950e3efb89e62807a96ab9ad090dbc2 420 PIRSF PIRSF006060 1 419 2.7E-60 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 M634_20375 e950e3efb89e62807a96ab9ad090dbc2 420 Gene3D G3DSA:1.20.1740.10 1 418 6.5E-62 T 12-10-2018 M634_20375 e950e3efb89e62807a96ab9ad090dbc2 420 Pfam PF13520 Amino acid permease 8 366 3.3E-31 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 M634_16900 ff3ebddf1033b5a7a93d4c3da493de0b 166 Gene3D G3DSA:3.40.630.30 1 164 3.2E-42 T 12-10-2018 M634_16900 ff3ebddf1033b5a7a93d4c3da493de0b 166 SUPERFAMILY SSF55729 3 161 1.44E-37 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_16900 ff3ebddf1033b5a7a93d4c3da493de0b 166 Pfam PF00583 Acetyltransferase (GNAT) family 38 136 6.9E-17 T 12-10-2018 IPR000182 GNAT domain M634_00215 9c14316ed662fc75bae10c6f33629521 171 Pfam PF04351 Pilus assembly protein, PilP 25 170 2.0E-41 T 12-10-2018 IPR007446 Pilus assembly protein PilP M634_00215 9c14316ed662fc75bae10c6f33629521 171 PIRSF PIRSF016481 1 171 7.7E-52 T 12-10-2018 IPR007446 Pilus assembly protein PilP M634_00215 9c14316ed662fc75bae10c6f33629521 171 Gene3D G3DSA:2.30.30.830 91 171 1.1E-25 T 12-10-2018 M634_02500 0ead13c11e7dec5525a7fd55d75083e9 132 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 6.6E-27 T 12-10-2018 M634_02500 0ead13c11e7dec5525a7fd55d75083e9 132 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 6.6E-27 T 12-10-2018 M634_02500 0ead13c11e7dec5525a7fd55d75083e9 132 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 6.6E-27 T 12-10-2018 M634_02500 0ead13c11e7dec5525a7fd55d75083e9 132 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 1.7E-32 T 12-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 M634_02500 0ead13c11e7dec5525a7fd55d75083e9 132 Pfam PF02416 mttA/Hcf106 family 4 49 1.7E-5 T 12-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 M634_02500 0ead13c11e7dec5525a7fd55d75083e9 132 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 132 18.068 T 12-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 M634_22755 63f6b527f75a5e8adffb876183458791 364 Gene3D G3DSA:3.40.47.10 1 362 7.0E-155 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M634_22755 63f6b527f75a5e8adffb876183458791 364 SUPERFAMILY SSF53901 7 325 3.17E-65 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M634_22755 63f6b527f75a5e8adffb876183458791 364 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 5 324 2.3E-111 T 12-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 M634_22755 63f6b527f75a5e8adffb876183458791 364 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 4 324 66.664 T 12-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 M634_22755 63f6b527f75a5e8adffb876183458791 364 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 184 2.2E-28 T 12-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 M634_22755 63f6b527f75a5e8adffb876183458791 364 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 235 324 1.5E-37 T 12-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 M634_03430 945e24a5697ab36b4d0112bc38135945 153 Pfam PF13673 Acetyltransferase (GNAT) domain 46 149 6.7E-16 T 12-10-2018 IPR000182 GNAT domain M634_03430 945e24a5697ab36b4d0112bc38135945 153 SUPERFAMILY SSF55729 1 150 1.98E-37 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_03430 945e24a5697ab36b4d0112bc38135945 153 Gene3D G3DSA:3.40.630.30 2 149 3.9E-42 T 12-10-2018 M634_05820 0c0926c5de091201ba9862b14bd0f1c2 474 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 308 1.0E-116 T 12-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 M634_05820 0c0926c5de091201ba9862b14bd0f1c2 474 Gene3D G3DSA:1.10.10.350 369 472 1.2E-24 T 12-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 M634_05820 0c0926c5de091201ba9862b14bd0f1c2 474 Gene3D G3DSA:3.40.50.620 2 317 1.8E-135 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M634_05820 0c0926c5de091201ba9862b14bd0f1c2 474 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 M634_05820 0c0926c5de091201ba9862b14bd0f1c2 474 SUPERFAMILY SSF48163 302 464 1.19E-47 T 12-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 M634_05820 0c0926c5de091201ba9862b14bd0f1c2 474 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 468 2.5E-198 T 12-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 M634_05820 0c0926c5de091201ba9862b14bd0f1c2 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 192 1.4E-27 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 M634_05820 0c0926c5de091201ba9862b14bd0f1c2 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 1.4E-27 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 M634_05820 0c0926c5de091201ba9862b14bd0f1c2 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 1.4E-27 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 M634_05820 0c0926c5de091201ba9862b14bd0f1c2 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 1.4E-27 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 M634_05820 0c0926c5de091201ba9862b14bd0f1c2 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 198 206 1.4E-27 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 M634_05820 0c0926c5de091201ba9862b14bd0f1c2 474 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 464 32.291 T 12-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 M634_05820 0c0926c5de091201ba9862b14bd0f1c2 474 SUPERFAMILY SSF52374 3 301 2.44E-110 T 12-10-2018 M634_22925 7523994328924d0b20ce6a4e6c86403a 409 Pfam PF00842 Alanine racemase, C-terminal domain 281 407 3.0E-32 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M634_22925 7523994328924d0b20ce6a4e6c86403a 409 SMART SM01005 280 408 6.2E-49 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M634_22925 7523994328924d0b20ce6a4e6c86403a 409 Hamap MF_01201 Alanine racemase. 42 408 26.236 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M634_22925 7523994328924d0b20ce6a4e6c86403a 409 Pfam PF01168 Alanine racemase, N-terminal domain 49 272 9.5E-49 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M634_22925 7523994328924d0b20ce6a4e6c86403a 409 Gene3D G3DSA:3.20.20.10 51 268 2.4E-130 T 12-10-2018 IPR029066 PLP-binding barrel M634_22925 7523994328924d0b20ce6a4e6c86403a 409 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 73 83 - T 12-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M634_22925 7523994328924d0b20ce6a4e6c86403a 409 TIGRFAM TIGR00492 alr: alanine racemase 45 408 3.5E-69 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M634_22925 7523994328924d0b20ce6a4e6c86403a 409 SUPERFAMILY SSF50621 272 408 2.65E-40 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 M634_22925 7523994328924d0b20ce6a4e6c86403a 409 PRINTS PR00992 Alanine racemase signature 334 351 5.3E-31 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M634_22925 7523994328924d0b20ce6a4e6c86403a 409 PRINTS PR00992 Alanine racemase signature 68 84 5.3E-31 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M634_22925 7523994328924d0b20ce6a4e6c86403a 409 PRINTS PR00992 Alanine racemase signature 104 122 5.3E-31 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M634_22925 7523994328924d0b20ce6a4e6c86403a 409 PRINTS PR00992 Alanine racemase signature 202 213 5.3E-31 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M634_22925 7523994328924d0b20ce6a4e6c86403a 409 PRINTS PR00992 Alanine racemase signature 166 178 5.3E-31 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M634_22925 7523994328924d0b20ce6a4e6c86403a 409 PRINTS PR00992 Alanine racemase signature 245 272 5.3E-31 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M634_22925 7523994328924d0b20ce6a4e6c86403a 409 PRINTS PR00992 Alanine racemase signature 313 328 5.3E-31 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 M634_22925 7523994328924d0b20ce6a4e6c86403a 409 SUPERFAMILY SSF51419 49 283 2.36E-46 T 12-10-2018 IPR029066 PLP-binding barrel M634_22925 7523994328924d0b20ce6a4e6c86403a 409 Gene3D G3DSA:2.40.37.10 45 404 2.4E-130 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 M634_01200 3bb12651b423c8f51990b5723f7c4c2c 151 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 64 133 2.1E-17 T 12-10-2018 IPR000504 RNA recognition motif domain GO:0003676 M634_01200 3bb12651b423c8f51990b5723f7c4c2c 151 SMART SM00360 63 135 2.1E-20 T 12-10-2018 IPR000504 RNA recognition motif domain GO:0003676 M634_01200 3bb12651b423c8f51990b5723f7c4c2c 151 SUPERFAMILY SSF54928 47 141 2.42E-27 T 12-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 M634_01200 3bb12651b423c8f51990b5723f7c4c2c 151 Gene3D G3DSA:3.30.70.330 44 149 1.6E-26 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily M634_09170 f44eaf3989db40f201e4acf4513b8fe2 633 Pfam PF04792 V antigen (LcrV) protein 513 633 4.4E-25 T 12-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 M634_09170 f44eaf3989db40f201e4acf4513b8fe2 633 SUPERFAMILY SSF103388 345 632 2.62E-71 T 12-10-2018 IPR036139 Virulence-associated V antigen superfamily GO:0005576|GO:0009405 M634_13495 4e264910174ce4a4f796911571b627c4 161 Gene3D G3DSA:2.40.50.140 30 142 1.9E-39 T 12-10-2018 M634_13495 4e264910174ce4a4f796911571b627c4 161 Pfam PF03100 CcmE 4 136 2.9E-44 T 12-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 M634_13495 4e264910174ce4a4f796911571b627c4 161 SUPERFAMILY SSF82093 30 142 4.32E-38 T 12-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 M634_13495 4e264910174ce4a4f796911571b627c4 161 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 146 32.123 T 12-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 M634_24200 5d08c0e162b6736b5ab138b6a5af9d87 141 PIRSF PIRSF006276 1 141 4.2E-44 T 12-10-2018 IPR006015 Universal stress protein A M634_24200 5d08c0e162b6736b5ab138b6a5af9d87 141 Pfam PF00582 Universal stress protein family 3 138 5.1E-13 T 12-10-2018 IPR006016 UspA M634_24200 5d08c0e162b6736b5ab138b6a5af9d87 141 Gene3D G3DSA:3.40.50.620 2 141 2.2E-35 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M634_24200 5d08c0e162b6736b5ab138b6a5af9d87 141 SUPERFAMILY SSF52402 3 139 4.52E-25 T 12-10-2018 M634_03200 d1c2a30a447534088b21ff8b011a636b 115 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 91 4.5E-5 T 12-10-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 M634_03200 d1c2a30a447534088b21ff8b011a636b 115 Gene3D G3DSA:3.30.429.10 1 115 4.6E-32 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily M634_03200 d1c2a30a447534088b21ff8b011a636b 115 SUPERFAMILY SSF55331 2 115 3.81E-33 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily M634_14105 2d8131c67aede57a8da4036041de4aa0 77 Pfam PF10982 Protein of unknown function (DUF2789) 1 75 5.5E-31 T 12-10-2018 IPR021250 Protein of unknown function DUF2789 M634_14105 2d8131c67aede57a8da4036041de4aa0 77 Gene3D G3DSA:1.10.10.1130 1 77 1.1E-30 T 12-10-2018 M634_13180 5bd6e79eac145479bf1775e2cfd6a164 837 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 178 497 1.5E-118 T 12-10-2018 IPR008766 Replication gene A protein GO:0006260 M634_06685 e5902036f372f7066faad60725fcee73 310 Pfam PF03601 Conserved hypothetical protein 698 24 291 8.8E-55 T 12-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 M634_19355 593667284276d4c1df7adbe231ba26aa 336 PIRSF PIRSF002825 2 329 2.8E-79 T 12-10-2018 IPR026045 Ferric binding protein M634_19355 593667284276d4c1df7adbe231ba26aa 336 Gene3D G3DSA:3.40.190.10 30 297 7.3E-79 T 12-10-2018 M634_19355 593667284276d4c1df7adbe231ba26aa 336 Pfam PF13343 Bacterial extracellular solute-binding protein 75 293 1.4E-26 T 12-10-2018 M634_19355 593667284276d4c1df7adbe231ba26aa 336 TIGRFAM TIGR03261 phnS2: putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein 6 333 1.9E-159 T 12-10-2018 IPR017663 ABC transport system, 1-aminoethylphosphonate-binding protein, putative M634_19355 593667284276d4c1df7adbe231ba26aa 336 Gene3D G3DSA:3.40.190.10 133 311 7.3E-79 T 12-10-2018 M634_19355 593667284276d4c1df7adbe231ba26aa 336 SUPERFAMILY SSF53850 27 326 2.74E-63 T 12-10-2018 M634_13975 dbffcc3697425b42057839ea501d34a0 243 Gene3D G3DSA:3.40.1160.10 3 243 1.9E-76 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily M634_13975 dbffcc3697425b42057839ea501d34a0 243 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 2.0E-102 T 12-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 M634_13975 dbffcc3697425b42057839ea501d34a0 243 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 44.084 T 12-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 M634_13975 dbffcc3697425b42057839ea501d34a0 243 Pfam PF00696 Amino acid kinase family 11 219 6.2E-27 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 M634_13975 dbffcc3697425b42057839ea501d34a0 243 PIRSF PIRSF005650 4 243 4.1E-89 T 12-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 M634_13975 dbffcc3697425b42057839ea501d34a0 243 SUPERFAMILY SSF53633 7 239 6.41E-72 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily M634_16710 e00f92edc67ecc4355ec29e2f51c8057 223 Gene3D G3DSA:3.40.50.2300 6 146 2.4E-33 T 12-10-2018 M634_16710 e00f92edc67ecc4355ec29e2f51c8057 223 Gene3D G3DSA:1.10.10.10 151 215 1.9E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_16710 e00f92edc67ecc4355ec29e2f51c8057 223 SMART SM00421 154 211 2.3E-24 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_16710 e00f92edc67ecc4355ec29e2f51c8057 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 199 2.4E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_16710 e00f92edc67ecc4355ec29e2f51c8057 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 187 2.4E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_16710 e00f92edc67ecc4355ec29e2f51c8057 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 171 2.4E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_16710 e00f92edc67ecc4355ec29e2f51c8057 223 SUPERFAMILY SSF46894 145 213 1.22E-20 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M634_16710 e00f92edc67ecc4355ec29e2f51c8057 223 Pfam PF00196 Bacterial regulatory proteins, luxR family 156 211 1.4E-20 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_16710 e00f92edc67ecc4355ec29e2f51c8057 223 ProSitePatterns PS00622 LuxR-type HTH domain signature. 171 198 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 M634_03420 45e07e0fc322f04f4c4eb80463e07e41 206 SUPERFAMILY SSF54534 7 205 2.75E-54 T 12-10-2018 M634_03420 45e07e0fc322f04f4c4eb80463e07e41 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 3 108 3.8E-24 T 12-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 M634_03420 45e07e0fc322f04f4c4eb80463e07e41 206 Gene3D G3DSA:1.10.287.460 4 67 1.9E-19 T 12-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 M634_03420 45e07e0fc322f04f4c4eb80463e07e41 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 117 203 2.2E-26 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain M634_03420 45e07e0fc322f04f4c4eb80463e07e41 206 Gene3D G3DSA:3.10.50.40 68 206 8.2E-50 T 12-10-2018 M634_13225 4d7dce7077e414a92c65cf0e48b1c7aa 199 Gene3D G3DSA:2.10.109.10 84 198 4.3E-25 T 12-10-2018 M634_13225 4d7dce7077e414a92c65cf0e48b1c7aa 199 Pfam PF16452 Bacteriophage CI repressor C-terminal domain 91 193 6.0E-22 T 12-10-2018 IPR032499 Bacteriophage CI repressor, C-terminal GO:0051259 M634_13225 4d7dce7077e414a92c65cf0e48b1c7aa 199 Gene3D G3DSA:1.10.260.40 14 83 1.7E-13 T 12-10-2018 M634_13225 4d7dce7077e414a92c65cf0e48b1c7aa 199 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 19 81 2.4E-13 T 12-10-2018 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 M634_24435 ae3f37205f844ffab5fa28ab67ab39de 262 Gene3D G3DSA:1.10.10.60 156 261 4.5E-24 T 12-10-2018 M634_24435 ae3f37205f844ffab5fa28ab67ab39de 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 242 258 4.3E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M634_24435 ae3f37205f844ffab5fa28ab67ab39de 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 227 242 4.3E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 M634_24435 ae3f37205f844ffab5fa28ab67ab39de 262 SUPERFAMILY SSF46689 213 260 1.08E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_24435 ae3f37205f844ffab5fa28ab67ab39de 262 Pfam PF02311 AraC-like ligand binding domain 33 144 1.6E-4 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 M634_24435 ae3f37205f844ffab5fa28ab67ab39de 262 SUPERFAMILY SSF51182 20 185 2.45E-10 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily M634_24435 ae3f37205f844ffab5fa28ab67ab39de 262 Pfam PF12833 Helix-turn-helix domain 182 260 1.6E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_24435 ae3f37205f844ffab5fa28ab67ab39de 262 SMART SM00342 176 258 2.3E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 M634_17400 cca4578a6a33b49332c1ea6a43aada9c 431 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 139 153 2.5E-8 T 12-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 M634_17400 cca4578a6a33b49332c1ea6a43aada9c 431 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 52 60 2.5E-8 T 12-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 M634_17400 cca4578a6a33b49332c1ea6a43aada9c 431 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 82 93 2.5E-8 T 12-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 M634_17400 cca4578a6a33b49332c1ea6a43aada9c 431 Pfam PF00561 alpha/beta hydrolase fold 50 217 1.2E-21 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 M634_17400 cca4578a6a33b49332c1ea6a43aada9c 431 SUPERFAMILY SSF53474 41 420 4.12E-34 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_14280 153c7cce1c39bbf6e23e8d9dba97ac34 324 Gene3D G3DSA:1.50.10.150 5 318 2.8E-45 T 12-10-2018 IPR038665 Voltage-dependent anion channel superfamily M634_14280 153c7cce1c39bbf6e23e8d9dba97ac34 324 Pfam PF03595 Voltage-dependent anion channel 19 306 1.8E-31 T 12-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 M634_20480 5f631f1505373cdebfd28ba643a27570 149 SUPERFAMILY SSF54909 63 149 2.28E-21 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel M634_20480 5f631f1505373cdebfd28ba643a27570 149 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 47 1.6E-18 T 12-10-2018 M634_20480 5f631f1505373cdebfd28ba643a27570 149 Pfam PF01037 Lrp/AsnC ligand binding domain 67 140 4.5E-21 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain M634_20480 5f631f1505373cdebfd28ba643a27570 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 1.2E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M634_20480 5f631f1505373cdebfd28ba643a27570 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 1.2E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M634_20480 5f631f1505373cdebfd28ba643a27570 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 1.2E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 M634_20480 5f631f1505373cdebfd28ba643a27570 149 SUPERFAMILY SSF46785 1 60 5.91E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_20480 5f631f1505373cdebfd28ba643a27570 149 Gene3D G3DSA:1.10.10.10 2 51 6.8E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_20480 5f631f1505373cdebfd28ba643a27570 149 SMART SM00344 1 110 2.5E-45 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 M634_20480 5f631f1505373cdebfd28ba643a27570 149 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 12-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site M634_20480 5f631f1505373cdebfd28ba643a27570 149 Gene3D G3DSA:3.30.70.920 52 146 7.3E-23 T 12-10-2018 M634_13140 11fd46042691f26561c119f2ba20269e 337 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 15 319 9.1E-98 T 12-10-2018 IPR006441 Bacteriophage P2, GpN, major capsid M634_13140 11fd46042691f26561c119f2ba20269e 337 Pfam PF05125 Phage major capsid protein, P2 family 13 325 3.4E-99 T 12-10-2018 IPR006441 Bacteriophage P2, GpN, major capsid M634_05825 4b363f37defa9dc5fb2cf8baf4ca811a 319 Pfam PF00691 OmpA family 210 304 1.6E-25 T 12-10-2018 IPR006665 OmpA-like domain M634_05825 4b363f37defa9dc5fb2cf8baf4ca811a 319 SUPERFAMILY SSF56925 18 171 2.04E-29 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel M634_05825 4b363f37defa9dc5fb2cf8baf4ca811a 319 PRINTS PR01021 OMPA domain signature 210 232 8.6E-17 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M634_05825 4b363f37defa9dc5fb2cf8baf4ca811a 319 PRINTS PR01021 OMPA domain signature 255 271 8.6E-17 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M634_05825 4b363f37defa9dc5fb2cf8baf4ca811a 319 PRINTS PR01021 OMPA domain signature 240 255 8.6E-17 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M634_05825 4b363f37defa9dc5fb2cf8baf4ca811a 319 SUPERFAMILY SSF103088 184 310 9.29E-39 T 12-10-2018 IPR036737 OmpA-like domain superfamily M634_05825 4b363f37defa9dc5fb2cf8baf4ca811a 319 Pfam PF01389 OmpA-like transmembrane domain 18 170 4.8E-32 T 12-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 M634_05825 4b363f37defa9dc5fb2cf8baf4ca811a 319 Gene3D G3DSA:2.40.160.20 5 182 8.3E-39 T 12-10-2018 M634_05825 4b363f37defa9dc5fb2cf8baf4ca811a 319 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 273 292 2.8E-6 T 12-10-2018 M634_05825 4b363f37defa9dc5fb2cf8baf4ca811a 319 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 293 313 2.8E-6 T 12-10-2018 M634_05825 4b363f37defa9dc5fb2cf8baf4ca811a 319 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 255 272 2.8E-6 T 12-10-2018 M634_05825 4b363f37defa9dc5fb2cf8baf4ca811a 319 Gene3D G3DSA:3.30.1330.60 183 318 1.4E-42 T 12-10-2018 IPR036737 OmpA-like domain superfamily M634_17785 0651b2651fc142c89e2a3c8036d9e3f6 414 Gene3D G3DSA:3.40.190.10 25 371 5.9E-125 T 12-10-2018 M634_17785 0651b2651fc142c89e2a3c8036d9e3f6 414 Pfam PF13416 Bacterial extracellular solute-binding protein 64 343 1.7E-16 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein M634_17785 0651b2651fc142c89e2a3c8036d9e3f6 414 Gene3D G3DSA:3.40.190.10 140 396 5.9E-125 T 12-10-2018 M634_17785 0651b2651fc142c89e2a3c8036d9e3f6 414 SUPERFAMILY SSF53850 25 409 4.79E-44 T 12-10-2018 M634_01075 64b9a1abb87d09eeeccac2b66c200e09 260 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 101 129 6.1E-9 T 12-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 M634_01075 64b9a1abb87d09eeeccac2b66c200e09 260 Gene3D G3DSA:3.90.79.20 3 130 9.7E-32 T 12-10-2018 M634_01075 64b9a1abb87d09eeeccac2b66c200e09 260 Pfam PF00293 NUDIX domain 137 236 1.1E-18 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 M634_01075 64b9a1abb87d09eeeccac2b66c200e09 260 SUPERFAMILY SSF55811 63 248 1.83E-43 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 M634_01075 64b9a1abb87d09eeeccac2b66c200e09 260 ProSitePatterns PS00893 Nudix box signature. 164 185 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 M634_01075 64b9a1abb87d09eeeccac2b66c200e09 260 Hamap MF_00297 NADH pyrophosphatase [nudC]. 3 260 41.559 T 12-10-2018 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 M634_01075 64b9a1abb87d09eeeccac2b66c200e09 260 Gene3D G3DSA:3.90.79.10 131 259 2.8E-40 T 12-10-2018 M634_15685 a4071c99810cdea358d60da8dbbf4788 440 SUPERFAMILY SSF51735 6 170 3.74E-54 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_15685 a4071c99810cdea358d60da8dbbf4788 440 Pfam PF02056 Family 4 glycosyl hydrolase 7 186 1.3E-61 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 M634_15685 a4071c99810cdea358d60da8dbbf4788 440 Gene3D G3DSA:3.90.110.10 171 439 7.2E-101 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 M634_15685 a4071c99810cdea358d60da8dbbf4788 440 SUPERFAMILY SSF56327 173 436 5.65E-95 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 M634_15685 a4071c99810cdea358d60da8dbbf4788 440 Gene3D G3DSA:3.40.50.720 1 170 8.8E-67 T 12-10-2018 M634_15685 a4071c99810cdea358d60da8dbbf4788 440 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 411 2.0E-51 T 12-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 M634_15685 a4071c99810cdea358d60da8dbbf4788 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 99 112 1.1E-47 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 M634_15685 a4071c99810cdea358d60da8dbbf4788 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 78 94 1.1E-47 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 M634_15685 a4071c99810cdea358d60da8dbbf4788 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 1.1E-47 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 M634_15685 a4071c99810cdea358d60da8dbbf4788 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 113 133 1.1E-47 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 M634_15685 a4071c99810cdea358d60da8dbbf4788 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 142 159 1.1E-47 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 M634_15685 a4071c99810cdea358d60da8dbbf4788 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 1.1E-47 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 M634_15685 a4071c99810cdea358d60da8dbbf4788 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 7 22 1.1E-47 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 M634_13610 436e6835573fa5e7b290ba1378de0ce7 348 SUPERFAMILY SSF101801 247 322 1.96E-13 T 12-10-2018 IPR036429 SpoA-like superfamily M634_13610 436e6835573fa5e7b290ba1378de0ce7 348 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 250 319 9.7E-17 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) M634_13610 436e6835573fa5e7b290ba1378de0ce7 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 9.9E-19 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 M634_13610 436e6835573fa5e7b290ba1378de0ce7 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 88 104 9.9E-19 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 M634_13610 436e6835573fa5e7b290ba1378de0ce7 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 113 132 9.9E-19 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 M634_13610 436e6835573fa5e7b290ba1378de0ce7 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 9.9E-19 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 M634_13610 436e6835573fa5e7b290ba1378de0ce7 348 Gene3D G3DSA:3.40.1550.10 43 230 1.3E-55 T 12-10-2018 IPR028976 CheC-like superfamily M634_13610 436e6835573fa5e7b290ba1378de0ce7 348 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 320 6.9E-125 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 M634_13610 436e6835573fa5e7b290ba1378de0ce7 348 SUPERFAMILY SSF103039 4 230 5.49E-21 T 12-10-2018 IPR028976 CheC-like superfamily M634_13610 436e6835573fa5e7b290ba1378de0ce7 348 PIRSF PIRSF002888 1 328 9.3E-92 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 M634_13610 436e6835573fa5e7b290ba1378de0ce7 348 Pfam PF02154 Flagellar motor switch protein FliM 37 229 2.2E-83 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 M634_19035 805e0b91b214dcbd93974f1e8340f217 436 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 11 410 1.1E-106 T 12-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 M634_19035 805e0b91b214dcbd93974f1e8340f217 436 Pfam PF05525 Branched-chain amino acid transport protein 5 423 3.1E-116 T 12-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 M634_03165 72476fcd47fbd869ec4fe054894670da 140 Pfam PF01575 MaoC like domain 20 130 6.9E-25 T 12-10-2018 IPR002539 MaoC-like dehydratase domain M634_03165 72476fcd47fbd869ec4fe054894670da 140 Gene3D G3DSA:3.10.129.10 4 140 2.6E-43 T 12-10-2018 M634_03165 72476fcd47fbd869ec4fe054894670da 140 SUPERFAMILY SSF54637 6 140 3.16E-38 T 12-10-2018 IPR029069 HotDog domain superfamily M634_24345 8ae99f7acaaffd753f43ad3566ff8692 137 Pfam PF02472 Biopolymer transport protein ExbD/TolR 14 134 2.4E-22 T 12-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 M634_11805 6d42b6a7083db1aa55a57a2ba302c9cf 460 Gene3D G3DSA:1.10.760.10 315 460 4.1E-10 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_11805 6d42b6a7083db1aa55a57a2ba302c9cf 460 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 22 460 8.3E-142 T 12-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase M634_11805 6d42b6a7083db1aa55a57a2ba302c9cf 460 PIRSF PIRSF028099 6 460 4.2E-185 T 12-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase M634_11805 6d42b6a7083db1aa55a57a2ba302c9cf 460 SUPERFAMILY SSF46626 319 460 1.39E-24 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_01725 155e3cc2ef6e7133ad0ffeb091d1c3d1 175 SUPERFAMILY SSF52218 3 158 4.03E-31 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M634_01725 155e3cc2ef6e7133ad0ffeb091d1c3d1 175 Gene3D G3DSA:3.40.50.360 2 114 9.4E-12 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M634_01725 155e3cc2ef6e7133ad0ffeb091d1c3d1 175 Pfam PF12724 Flavodoxin domain 5 153 4.1E-51 T 12-10-2018 IPR026816 Flavodoxin domain M634_21825 2820a61a6459f67083b64fc17d789583 129 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 27 93 1.7E-19 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core M634_21825 2820a61a6459f67083b64fc17d789583 129 Gene3D G3DSA:1.10.287.1080 1 128 1.9E-15 T 12-10-2018 M634_21825 2820a61a6459f67083b64fc17d789583 129 SUPERFAMILY SSF101386 2 103 1.07E-16 T 12-10-2018 M634_23470 6573e11d4f299c2ce27aae1cfb8cbc51 300 SUPERFAMILY SSF51569 1 297 3.22E-72 T 12-10-2018 M634_23470 6573e11d4f299c2ce27aae1cfb8cbc51 300 Gene3D G3DSA:3.20.20.70 1 299 4.5E-130 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_23470 6573e11d4f299c2ce27aae1cfb8cbc51 300 Pfam PF00682 HMGL-like 7 276 4.7E-52 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 M634_23470 6573e11d4f299c2ce27aae1cfb8cbc51 300 ProSitePatterns PS01062 Hydroxymethylglutaryl-coenzyme A lyase active site. 232 241 - T 12-10-2018 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site GO:0004419 KEGG: 00072+4.1.3.4|KEGG: 00280+4.1.3.4|KEGG: 00281+4.1.3.4|KEGG: 00650+4.1.3.4|MetaCyc: PWY-5074|Reactome: R-HSA-77111|Reactome: R-HSA-9033241 M634_17040 00e65ccffa8f813e4f31d76f06e68529 231 Gene3D G3DSA:2.60.40.2130 29 178 2.5E-13 T 12-10-2018 IPR038678 Spondin, N-terminal domain superfamily Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 M634_17040 00e65ccffa8f813e4f31d76f06e68529 231 Pfam PF06468 Spondin_N 45 164 4.4E-10 T 12-10-2018 IPR009465 Spondin, N-terminal Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 M634_15315 54c7548b912f44e018accf7c699ef4cf 192 Gene3D G3DSA:1.10.1740.10 1 121 9.3E-46 T 12-10-2018 M634_15315 54c7548b912f44e018accf7c699ef4cf 192 Pfam PF08281 Sigma-70, region 4 134 181 4.2E-18 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 M634_15315 54c7548b912f44e018accf7c699ef4cf 192 Gene3D G3DSA:1.10.10.10 122 192 2.4E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_15315 54c7548b912f44e018accf7c699ef4cf 192 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 47 78 - T 12-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 M634_15315 54c7548b912f44e018accf7c699ef4cf 192 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 2 190 3.0E-103 T 12-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 M634_15315 54c7548b912f44e018accf7c699ef4cf 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 185 6.6E-33 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 M634_15315 54c7548b912f44e018accf7c699ef4cf 192 SUPERFAMILY SSF88659 124 184 1.63E-17 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like M634_15315 54c7548b912f44e018accf7c699ef4cf 192 Pfam PF04542 Sigma-70 region 2 25 92 3.3E-18 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 M634_15315 54c7548b912f44e018accf7c699ef4cf 192 SUPERFAMILY SSF88946 2 107 1.51E-32 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 M634_13755 902292351d811186df8e8de1193d7599 339 PIRSF PIRSF026343 4 339 7.3E-122 T 12-10-2018 IPR014524 Outer membrane protein assembly factor BamC M634_13755 902292351d811186df8e8de1193d7599 339 Pfam PF06804 NlpB/DapX lipoprotein 35 336 1.3E-106 T 12-10-2018 IPR010653 NlpB/DapX lipoprotein M634_13755 902292351d811186df8e8de1193d7599 339 Gene3D G3DSA:3.30.310.170 221 339 1.4E-42 T 12-10-2018 M634_13755 902292351d811186df8e8de1193d7599 339 Gene3D G3DSA:3.30.530.50 97 207 1.0E-12 T 12-10-2018 M634_13755 902292351d811186df8e8de1193d7599 339 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 4 338 34.469 T 12-10-2018 IPR014524 Outer membrane protein assembly factor BamC M634_01560 f8b14f59863da2be3b0d46b579e27ef4 101 Pfam PF12305 Protein of unknown function (DUF3630) 5 98 8.8E-39 T 12-10-2018 IPR022080 Protein of unknown function DUF3630 M634_17285 f0190b9008b5137a8ea3b9b4b5866c83 151 SUPERFAMILY SSF55729 1 151 1.49E-27 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_17285 f0190b9008b5137a8ea3b9b4b5866c83 151 Pfam PF00583 Acetyltransferase (GNAT) family 43 129 1.1E-14 T 12-10-2018 IPR000182 GNAT domain M634_17285 f0190b9008b5137a8ea3b9b4b5866c83 151 Gene3D G3DSA:3.40.630.30 1 151 7.4E-41 T 12-10-2018 M634_17920 f46f7efc6ef972c9cb1bdc5ba5b238cb 361 Gene3D G3DSA:1.10.287.950 3 254 2.3E-44 T 12-10-2018 M634_17920 f46f7efc6ef972c9cb1bdc5ba5b238cb 361 Pfam PF13682 Chemoreceptor zinc-binding domain 258 321 6.0E-15 T 12-10-2018 IPR025991 Chemoreceptor zinc-binding domain M634_17920 f46f7efc6ef972c9cb1bdc5ba5b238cb 361 SUPERFAMILY SSF58104 22 242 1.57E-43 T 12-10-2018 M634_17920 f46f7efc6ef972c9cb1bdc5ba5b238cb 361 SMART SM00283 41 255 2.0E-17 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_17920 f46f7efc6ef972c9cb1bdc5ba5b238cb 361 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 114 239 7.0E-30 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_24065 8d913dc0e6bb3774854abef0af95af6d 342 Gene3D G3DSA:2.130.10.10 1 339 1.2E-89 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 M634_24065 8d913dc0e6bb3774854abef0af95af6d 342 SUPERFAMILY SSF51004 60 325 3.27E-29 T 12-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily M634_24065 8d913dc0e6bb3774854abef0af95af6d 342 Pfam PF10282 Lactonase, 7-bladed beta-propeller 9 338 3.4E-94 T 12-10-2018 IPR019405 Lactonase, 7-bladed beta propeller M634_14805 b98b2e6f8fdb7b41c72014e5ef11a976 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 6.3E-18 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 M634_14805 b98b2e6f8fdb7b41c72014e5ef11a976 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 317 2.9E-22 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 M634_14805 b98b2e6f8fdb7b41c72014e5ef11a976 327 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_14805 b98b2e6f8fdb7b41c72014e5ef11a976 327 Pfam PF00005 ABC transporter 26 181 8.5E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_14805 b98b2e6f8fdb7b41c72014e5ef11a976 327 SMART SM00382 34 231 1.4E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_14805 b98b2e6f8fdb7b41c72014e5ef11a976 327 Gene3D G3DSA:3.40.50.300 3 326 2.6E-90 T 12-10-2018 M634_14805 b98b2e6f8fdb7b41c72014e5ef11a976 327 SUPERFAMILY SSF52540 5 252 1.15E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_12160 20bf17061e9910df6a95c13fe03e3354 339 PIRSF PIRSF029594 1 331 4.3E-95 T 12-10-2018 IPR016926 Uncharacterised conserved protein UCP029594 M634_12160 20bf17061e9910df6a95c13fe03e3354 339 Pfam PF13515 Fusaric acid resistance protein-like 182 313 5.2E-7 T 12-10-2018 M634_12160 20bf17061e9910df6a95c13fe03e3354 339 Pfam PF11168 Protein of unknown function (DUF2955) 2 141 2.4E-47 T 12-10-2018 IPR022604 Protein of unknown function DUF2955 M634_01780 7fd6a24837091f8c0b4c2fb703898e54 305 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 294 61.667 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 M634_01780 7fd6a24837091f8c0b4c2fb703898e54 305 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 302 2.4E-170 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 M634_01780 7fd6a24837091f8c0b4c2fb703898e54 305 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 293 9.7E-149 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 M634_01780 7fd6a24837091f8c0b4c2fb703898e54 305 Gene3D G3DSA:3.30.930.10 1 215 4.5E-110 T 12-10-2018 M634_01780 7fd6a24837091f8c0b4c2fb703898e54 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 2.7E-70 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 M634_01780 7fd6a24837091f8c0b4c2fb703898e54 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 2.7E-70 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 M634_01780 7fd6a24837091f8c0b4c2fb703898e54 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 254 270 2.7E-70 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 M634_01780 7fd6a24837091f8c0b4c2fb703898e54 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 2.7E-70 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 M634_01780 7fd6a24837091f8c0b4c2fb703898e54 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 2.7E-70 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 M634_01780 7fd6a24837091f8c0b4c2fb703898e54 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 2.7E-70 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 M634_01780 7fd6a24837091f8c0b4c2fb703898e54 305 Gene3D G3DSA:1.20.58.180 216 298 8.4E-34 T 12-10-2018 M634_01780 7fd6a24837091f8c0b4c2fb703898e54 305 SUPERFAMILY SSF55681 8 293 5.14E-132 T 12-10-2018 M634_05795 2e86515a9afd7a1ab1cca1d7f6a479a2 149 Pfam PF04214 Protein of unknown function, DUF 48 118 5.9E-30 T 12-10-2018 IPR007332 Protein of unknown function DUF411 M634_22400 a9a72aadcfd959e4d7a94a20253ae6cd 189 Gene3D G3DSA:3.30.70.1070 89 180 3.2E-21 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 M634_22400 a9a72aadcfd959e4d7a94a20253ae6cd 189 SUPERFAMILY SSF110997 99 160 1.28E-7 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 M634_22400 a9a72aadcfd959e4d7a94a20253ae6cd 189 Pfam PF05036 Sporulation related domain 99 171 3.6E-13 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 M634_19325 a0a8d53469e33dec98f1cc7f231b5fca 95 Gene3D G3DSA:3.40.50.2300 1 90 1.4E-20 T 12-10-2018 M634_19325 a0a8d53469e33dec98f1cc7f231b5fca 95 SUPERFAMILY SSF52794 1 89 5.23E-21 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 M634_19325 a0a8d53469e33dec98f1cc7f231b5fca 95 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 83 3.8E-14 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 M634_19775 f3863633380c9aa2ef0e041cb531c0b0 288 Pfam PF01636 Phosphotransferase enzyme family 35 210 9.6E-10 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase M634_19775 f3863633380c9aa2ef0e041cb531c0b0 288 Gene3D G3DSA:3.90.1200.10 93 226 2.3E-6 T 12-10-2018 M634_19775 f3863633380c9aa2ef0e041cb531c0b0 288 SUPERFAMILY SSF56112 22 226 1.28E-18 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily M634_15975 55b8d0ffc1ccc01be07a4a5bb0aa1fcb 189 TIGRFAM TIGR00172 maf: septum formation protein Maf 6 184 5.9E-55 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 M634_15975 55b8d0ffc1ccc01be07a4a5bb0aa1fcb 189 Pfam PF02545 Maf-like protein 7 187 1.6E-60 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 M634_15975 55b8d0ffc1ccc01be07a4a5bb0aa1fcb 189 Gene3D G3DSA:3.90.950.10 5 189 2.1E-70 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like M634_15975 55b8d0ffc1ccc01be07a4a5bb0aa1fcb 189 SUPERFAMILY SSF52972 5 187 5.3E-63 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like M634_15975 55b8d0ffc1ccc01be07a4a5bb0aa1fcb 189 PIRSF PIRSF006305 2 189 4.2E-57 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 M634_15975 55b8d0ffc1ccc01be07a4a5bb0aa1fcb 189 Hamap MF_00528 Septum formation protein Maf [maf]. 6 189 29.755 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 M634_12810 b1d84c569586ddbff5b650c541c9ef28 138 ProSitePatterns PS00934 Glyoxalase I signature 1. 8 29 - T 12-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 M634_12810 b1d84c569586ddbff5b650c541c9ef28 138 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 5 136 8.3E-69 T 12-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 M634_12810 b1d84c569586ddbff5b650c541c9ef28 138 ProSitePatterns PS00935 Glyoxalase I signature 2. 72 84 - T 12-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 M634_12810 b1d84c569586ddbff5b650c541c9ef28 138 SUPERFAMILY SSF54593 3 130 3.76E-36 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M634_12810 b1d84c569586ddbff5b650c541c9ef28 138 Gene3D G3DSA:3.10.180.10 3 135 4.0E-50 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M634_12810 b1d84c569586ddbff5b650c541c9ef28 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 126 6.4E-24 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain M634_22305 50042db3176b581e0e1730f998156045 279 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 152 253 1.6E-15 T 12-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 M634_22305 50042db3176b581e0e1730f998156045 279 Gene3D G3DSA:2.60.120.330 1 279 8.0E-98 T 12-10-2018 IPR027443 Isopenicillin N synthase-like M634_22305 50042db3176b581e0e1730f998156045 279 SUPERFAMILY SSF51197 7 276 1.44E-62 T 12-10-2018 M634_22305 50042db3176b581e0e1730f998156045 279 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 11 94 1.5E-10 T 12-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain M634_02875 42f2a23e6dc904fee6b4f1288025e880 141 Pfam PF06146 Phosphate-starvation-inducible E 51 117 2.6E-13 T 12-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like M634_02875 42f2a23e6dc904fee6b4f1288025e880 141 PIRSF PIRSF029598 3 135 6.0E-40 T 12-10-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 M634_21975 ac147c6a3dd324857f2400c70e8ff022 954 SUPERFAMILY SSF53383 17 437 2.17E-100 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_21975 ac147c6a3dd324857f2400c70e8ff022 954 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 952 25.915 T 12-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 M634_21975 ac147c6a3dd324857f2400c70e8ff022 954 Gene3D G3DSA:3.40.640.10 95 353 1.6E-105 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_21975 ac147c6a3dd324857f2400c70e8ff022 954 Gene3D G3DSA:3.40.640.10 522 746 6.3E-59 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_21975 ac147c6a3dd324857f2400c70e8ff022 954 Pfam PF02347 Glycine cleavage system P-protein 458 734 6.7E-9 T 12-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 M634_21975 ac147c6a3dd324857f2400c70e8ff022 954 Pfam PF02347 Glycine cleavage system P-protein 17 438 1.3E-179 T 12-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 M634_21975 ac147c6a3dd324857f2400c70e8ff022 954 Gene3D G3DSA:3.90.1150.10 760 896 3.4E-41 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M634_21975 ac147c6a3dd324857f2400c70e8ff022 954 SUPERFAMILY SSF53383 454 947 1.15E-97 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_21975 ac147c6a3dd324857f2400c70e8ff022 954 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 946 0.0 T 12-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 M634_19940 eb0db23680eba67449a12d2886ad9dc1 338 Gene3D G3DSA:3.30.70.270 180 338 1.1E-41 T 12-10-2018 M634_19940 eb0db23680eba67449a12d2886ad9dc1 338 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 184 336 2.6E-32 T 12-10-2018 IPR000160 GGDEF domain M634_19940 eb0db23680eba67449a12d2886ad9dc1 338 SUPERFAMILY SSF55073 192 336 3.37E-38 T 12-10-2018 IPR029787 Nucleotide cyclase M634_19940 eb0db23680eba67449a12d2886ad9dc1 338 Pfam PF00990 Diguanylate cyclase, GGDEF domain 189 336 2.8E-35 T 12-10-2018 IPR000160 GGDEF domain M634_19940 eb0db23680eba67449a12d2886ad9dc1 338 SMART SM00267 176 337 3.5E-35 T 12-10-2018 IPR000160 GGDEF domain M634_09905 4aad664c6c232e15f4f3f3c60953ba68 672 Gene3D G3DSA:1.10.287.950 341 669 4.6E-60 T 12-10-2018 M634_09905 4aad664c6c232e15f4f3f3c60953ba68 672 SUPERFAMILY SSF58104 359 668 4.71E-61 T 12-10-2018 M634_09905 4aad664c6c232e15f4f3f3c60953ba68 672 SMART SM00283 405 667 3.8E-41 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_09905 4aad664c6c232e15f4f3f3c60953ba68 672 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 475 633 2.1E-38 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 M634_09905 4aad664c6c232e15f4f3f3c60953ba68 672 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 314 334 3.0E-20 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M634_09905 4aad664c6c232e15f4f3f3c60953ba68 672 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 504 531 3.0E-20 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M634_09905 4aad664c6c232e15f4f3f3c60953ba68 672 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 533 562 3.0E-20 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 M634_13420 589f876c337f599e61aa236cec070d07 154 Gene3D G3DSA:3.40.50.1240 1 154 2.6E-34 T 12-10-2018 IPR029033 Histidine phosphatase superfamily M634_13420 589f876c337f599e61aa236cec070d07 154 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 69 1.3E-9 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 M634_13420 589f876c337f599e61aa236cec070d07 154 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 154 1.3E-35 T 12-10-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0101006 M634_13420 589f876c337f599e61aa236cec070d07 154 SMART SM00855 2 116 5.9E-6 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 M634_13420 589f876c337f599e61aa236cec070d07 154 PIRSF PIRSF000709 81 148 40.0 T 12-10-2018 M634_13420 589f876c337f599e61aa236cec070d07 154 PIRSF PIRSF000709 1 90 0.0035 T 12-10-2018 M634_13420 589f876c337f599e61aa236cec070d07 154 SUPERFAMILY SSF53254 1 144 2.57E-21 T 12-10-2018 IPR029033 Histidine phosphatase superfamily M634_03635 3743f9bc0a9745b693d7c032ddec0bf4 266 Pfam PF06738 Putative threonine/serine exporter 21 258 2.4E-67 T 12-10-2018 IPR010619 Putative threonine/serine exporter M634_17480 0573a05592141bee4f31e27c727c8bb5 374 Pfam PF01103 Surface antigen 91 296 9.6E-10 T 12-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 M634_17480 0573a05592141bee4f31e27c727c8bb5 374 Gene3D G3DSA:2.40.160.50 90 372 1.9E-10 T 12-10-2018 M634_09990 630248a201333e7977502df895c0f9c3 356 Pfam PF13439 Glycosyltransferase Family 4 25 169 2.2E-15 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 M634_09990 630248a201333e7977502df895c0f9c3 356 Gene3D G3DSA:3.40.50.2000 16 189 6.1E-16 T 12-10-2018 M634_09990 630248a201333e7977502df895c0f9c3 356 Pfam PF00534 Glycosyl transferases group 1 189 331 2.1E-24 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 M634_09990 630248a201333e7977502df895c0f9c3 356 SUPERFAMILY SSF53756 19 350 5.83E-57 T 12-10-2018 M634_09990 630248a201333e7977502df895c0f9c3 356 Gene3D G3DSA:3.40.50.2000 190 337 3.0E-32 T 12-10-2018 M634_09215 e0343f5a494c932696ab20fffccbbd01 138 Gene3D G3DSA:2.170.150.70 7 113 1.1E-12 T 12-10-2018 M634_09215 e0343f5a494c932696ab20fffccbbd01 138 SUPERFAMILY SSF51316 7 127 7.95E-32 T 12-10-2018 IPR011057 Mss4-like superfamily M634_09215 e0343f5a494c932696ab20fffccbbd01 138 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 28 110 2.8E-14 T 12-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 M634_18475 ffc4a5a893c2807ac9c51d88363cdcc2 288 SMART SM00849 38 223 1.7E-20 T 12-10-2018 IPR001279 Metallo-beta-lactamase M634_18475 ffc4a5a893c2807ac9c51d88363cdcc2 288 SUPERFAMILY SSF56281 7 263 1.68E-40 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M634_18475 ffc4a5a893c2807ac9c51d88363cdcc2 288 Gene3D G3DSA:3.60.15.10 23 259 1.1E-27 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M634_18475 ffc4a5a893c2807ac9c51d88363cdcc2 288 Pfam PF00753 Metallo-beta-lactamase superfamily 38 223 2.7E-13 T 12-10-2018 IPR001279 Metallo-beta-lactamase M634_22815 48fc7d643e69d0a20e8bfe39fc1349fa 162 Pfam PF01936 NYN domain 8 156 1.6E-38 T 12-10-2018 IPR021139 NYN domain, limkain-b1-type M634_22815 48fc7d643e69d0a20e8bfe39fc1349fa 162 Gene3D G3DSA:3.40.50.1010 1 162 5.6E-64 T 12-10-2018 M634_20600 3ae8eefbdecde9b176d8817752c69fbc 154 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 67 99 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 M634_20600 3ae8eefbdecde9b176d8817752c69fbc 154 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 4 109 2.3E-25 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain M634_20600 3ae8eefbdecde9b176d8817752c69fbc 154 PIRSF PIRSF006019 1 148 4.1E-44 T 12-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 M634_20600 3ae8eefbdecde9b176d8817752c69fbc 154 SUPERFAMILY SSF53927 8 142 9.83E-32 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 M634_20600 3ae8eefbdecde9b176d8817752c69fbc 154 Gene3D G3DSA:3.40.140.10 2 152 1.2E-40 T 12-10-2018 M634_17340 939b081ff313a758ecc0b27353b4ea55 381 Pfam PF01594 AI-2E family transporter 24 347 1.4E-33 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like M634_23070 599a1e41e47c2ec6a127e75c9f17d35f 607 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 607 9.5E-200 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like M634_23070 599a1e41e47c2ec6a127e75c9f17d35f 607 PIRSF PIRSF028304 1 606 1.1E-152 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like M634_23070 599a1e41e47c2ec6a127e75c9f17d35f 607 Pfam PF05947 Type VI secretion system, TssF 6 605 1.9E-178 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like M634_22255 e8d3f23aeb5e350df75a20f1353c9bbe 185 Gene3D G3DSA:2.30.30.40 115 185 3.8E-24 T 12-10-2018 M634_22255 e8d3f23aeb5e350df75a20f1353c9bbe 185 Pfam PF08274 PhnA Zinc-Ribbon 13 52 1.5E-11 T 12-10-2018 IPR013987 PhnA protein, N-terminal M634_22255 e8d3f23aeb5e350df75a20f1353c9bbe 185 SMART SM00782 6 52 2.0E-30 T 12-10-2018 IPR013991 PhnA protein N-terminal, proteobacterial M634_22255 e8d3f23aeb5e350df75a20f1353c9bbe 185 Pfam PF03831 PhnA domain 119 184 9.5E-23 T 12-10-2018 IPR013988 PhnA protein, C-terminal M634_22255 e8d3f23aeb5e350df75a20f1353c9bbe 185 SUPERFAMILY SSF82057 117 184 1.79E-20 T 12-10-2018 M634_19660 c09d4d9a78829f929ad57832715ba7ca 146 Gene3D G3DSA:3.40.930.10 1 145 3.3E-32 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 M634_19660 c09d4d9a78829f929ad57832715ba7ca 146 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 6 125 1.2E-30 T 12-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 M634_19660 c09d4d9a78829f929ad57832715ba7ca 146 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 144 7.5E-32 T 12-10-2018 IPR002178 PTS EIIA type-2 domain M634_19660 c09d4d9a78829f929ad57832715ba7ca 146 SUPERFAMILY SSF55804 1 144 2.75E-30 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 M634_12620 0a162f97327c2ca5029522232457fd2d 424 Pfam PF02308 MgtC family 16 141 6.1E-19 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 M634_12620 0a162f97327c2ca5029522232457fd2d 424 Pfam PF13194 Domain of unknown function (DUF4010) 189 397 4.3E-65 T 12-10-2018 IPR025105 Domain of unknown function DUF4010 M634_12490 d1a29f63b69484c7b27289e3e045f618 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 16.766 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_12490 d1a29f63b69484c7b27289e3e045f618 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 2.4E-19 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_12490 d1a29f63b69484c7b27289e3e045f618 56 Pfam PF01783 Ribosomal L32p protein family 2 56 1.5E-19 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_12490 d1a29f63b69484c7b27289e3e045f618 56 SUPERFAMILY SSF57829 2 55 1.53E-17 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 M634_22985 2d0e9c946dd11414480d7eee6340ca14 105 Pfam PF00034 Cytochrome c 33 101 6.1E-8 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_22985 2d0e9c946dd11414480d7eee6340ca14 105 Gene3D G3DSA:1.10.760.10 21 104 5.2E-23 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_22985 2d0e9c946dd11414480d7eee6340ca14 105 SUPERFAMILY SSF46626 19 102 3.58E-20 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_14060 febff0e8bcdce949717b048d34300773 222 SUPERFAMILY SSF158682 81 221 1.83E-27 T 12-10-2018 IPR029024 TerB-like M634_14060 febff0e8bcdce949717b048d34300773 222 Gene3D G3DSA:1.10.3680.10 98 222 3.8E-12 T 12-10-2018 IPR029024 TerB-like M634_14060 febff0e8bcdce949717b048d34300773 222 Pfam PF04391 Protein of unknown function (DUF533) 43 221 1.1E-61 T 12-10-2018 IPR007486 Inner membrane protein YebE M634_02230 5d3cbcf07367f7a9b7e091faa79c3e2e 241 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 91 209 1.4E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M634_02230 5d3cbcf07367f7a9b7e091faa79c3e2e 241 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 109 203 4.1E-12 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M634_02230 5d3cbcf07367f7a9b7e091faa79c3e2e 241 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 209 2.3E-22 T 12-10-2018 M634_02230 5d3cbcf07367f7a9b7e091faa79c3e2e 241 Gene3D G3DSA:1.20.120.710 15 109 3.1E-59 T 12-10-2018 M634_02230 5d3cbcf07367f7a9b7e091faa79c3e2e 241 SUPERFAMILY SSF56784 3 237 1.11E-42 T 12-10-2018 IPR036412 HAD-like superfamily M634_02230 5d3cbcf07367f7a9b7e091faa79c3e2e 241 Gene3D G3DSA:3.40.50.1000 3 232 3.1E-59 T 12-10-2018 IPR023214 HAD superfamily M634_16495 e8691fdcf43c3628af7f740f48a2ebd4 401 SUPERFAMILY SSF56935 68 302 7.33E-5 T 12-10-2018 M634_16495 e8691fdcf43c3628af7f740f48a2ebd4 401 Gene3D G3DSA:2.40.160.20 235 401 5.9E-6 T 12-10-2018 M634_16495 e8691fdcf43c3628af7f740f48a2ebd4 401 Pfam PF10082 Putative beta-barrel porin 2 34 396 1.3E-30 T 12-10-2018 IPR018759 Putative beta-barrel porin 2 M634_16495 e8691fdcf43c3628af7f740f48a2ebd4 401 SUPERFAMILY SSF56925 280 398 6.8E-7 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel M634_19595 fe29d9d750438abc92a64d1fb86e192d 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.1E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_19595 fe29d9d750438abc92a64d1fb86e192d 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.1E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_19595 fe29d9d750438abc92a64d1fb86e192d 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.1E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_19595 fe29d9d750438abc92a64d1fb86e192d 296 Gene3D G3DSA:3.40.190.10 98 277 2.4E-36 T 12-10-2018 M634_19595 fe29d9d750438abc92a64d1fb86e192d 296 SUPERFAMILY SSF53850 86 281 1.41E-17 T 12-10-2018 M634_19595 fe29d9d750438abc92a64d1fb86e192d 296 Gene3D G3DSA:1.10.10.10 1 92 8.8E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_19595 fe29d9d750438abc92a64d1fb86e192d 296 Pfam PF03466 LysR substrate binding domain 85 280 8.8E-15 T 12-10-2018 IPR005119 LysR, substrate-binding M634_19595 fe29d9d750438abc92a64d1fb86e192d 296 Gene3D G3DSA:3.40.190.10 158 252 2.4E-36 T 12-10-2018 M634_19595 fe29d9d750438abc92a64d1fb86e192d 296 SUPERFAMILY SSF46785 3 81 1.14E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_19595 fe29d9d750438abc92a64d1fb86e192d 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.3E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_21045 433f4e8a7b5712493f39e2de78cad814 157 Gene3D G3DSA:3.30.300.20 1 154 8.2E-48 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta M634_21045 433f4e8a7b5712493f39e2de78cad814 157 SUPERFAMILY SSF82784 1 152 1.44E-47 T 12-10-2018 IPR036102 OsmC/Ohr superfamily M634_21045 433f4e8a7b5712493f39e2de78cad814 157 Pfam PF02566 OsmC-like protein 55 151 2.8E-15 T 12-10-2018 IPR003718 OsmC/Ohr family M634_10625 0d2c86b41af115ef7b9929b915046c4e 69 Pfam PF03692 Putative zinc- or iron-chelating domain 20 57 4.4E-8 T 12-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein M634_20825 4bcd0b57197b1ab516d9a4f12910473c 273 SUPERFAMILY SSF52540 13 251 9.74E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_20825 4bcd0b57197b1ab516d9a4f12910473c 273 Pfam PF00005 ABC transporter 31 179 3.4E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_20825 4bcd0b57197b1ab516d9a4f12910473c 273 Gene3D G3DSA:3.40.50.300 10 253 5.3E-56 T 12-10-2018 M634_20825 4bcd0b57197b1ab516d9a4f12910473c 273 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_20825 4bcd0b57197b1ab516d9a4f12910473c 273 SMART SM00382 40 236 4.5E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_03370 fa2b6ea283a1d2ae93ee95c140b5adcb 58 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 9.1E-27 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03370 fa2b6ea283a1d2ae93ee95c140b5adcb 58 PIRSF PIRSF002211 1 58 1.3E-28 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03370 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 22.06 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_03370 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Gene3D G3DSA:3.30.1390.20 1 58 3.6E-28 T 12-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily M634_03370 fa2b6ea283a1d2ae93ee95c140b5adcb 58 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 12-10-2018 IPR018038 Ribosomal protein L30, conserved site M634_03370 fa2b6ea283a1d2ae93ee95c140b5adcb 58 SUPERFAMILY SSF55129 1 58 1.83E-23 T 12-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily M634_03370 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 2.6E-21 T 12-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain M634_01800 fc8d05ad8946bf0bc01d2fbddc10dd12 145 Gene3D G3DSA:2.60.40.790 34 137 3.3E-23 T 12-10-2018 IPR008978 HSP20-like chaperone M634_01800 fc8d05ad8946bf0bc01d2fbddc10dd12 145 Pfam PF00011 Hsp20/alpha crystallin family 43 136 3.4E-19 T 12-10-2018 IPR002068 Alpha crystallin/Hsp20 domain M634_01800 fc8d05ad8946bf0bc01d2fbddc10dd12 145 SUPERFAMILY SSF49764 6 137 4.19E-23 T 12-10-2018 IPR008978 HSP20-like chaperone M634_12890 f2f8ea3292f61ce78c3f485c2f028bef 429 Gene3D G3DSA:1.20.120.160 310 421 1.2E-20 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 M634_12890 f2f8ea3292f61ce78c3f485c2f028bef 429 SUPERFAMILY SSF47226 309 422 2.09E-20 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 M634_12890 f2f8ea3292f61ce78c3f485c2f028bef 429 Pfam PF01627 Hpt domain 333 409 7.2E-12 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 M634_24115 7f8405f7b8462ae30bbbcfe3c5f1a297 468 Gene3D G3DSA:1.20.1600.10 39 452 1.0E-37 T 12-10-2018 M634_24115 7f8405f7b8462ae30bbbcfe3c5f1a297 468 SUPERFAMILY SSF56954 9 452 3.79E-48 T 12-10-2018 M634_24115 7f8405f7b8462ae30bbbcfe3c5f1a297 468 Pfam PF02321 Outer membrane efflux protein 271 450 1.6E-16 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 M634_24115 7f8405f7b8462ae30bbbcfe3c5f1a297 468 Pfam PF02321 Outer membrane efflux protein 48 229 1.7E-5 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 M634_10935 59ef4c5ed39a45aa15844ef28ca7617b 334 Pfam PF02016 LD-carboxypeptidase 13 317 4.2E-71 T 12-10-2018 IPR003507 Peptidase family S66 M634_10935 59ef4c5ed39a45aa15844ef28ca7617b 334 SUPERFAMILY SSF141986 170 323 1.7E-40 T 12-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily M634_10935 59ef4c5ed39a45aa15844ef28ca7617b 334 Gene3D G3DSA:3.40.50.10740 1 163 1.8E-59 T 12-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal M634_10935 59ef4c5ed39a45aa15844ef28ca7617b 334 Gene3D G3DSA:3.50.30.60 164 334 2.4E-48 T 12-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily M634_10935 59ef4c5ed39a45aa15844ef28ca7617b 334 PIRSF PIRSF028757 1 332 1.1E-92 T 12-10-2018 IPR003507 Peptidase family S66 M634_10935 59ef4c5ed39a45aa15844ef28ca7617b 334 SUPERFAMILY SSF52317 2 168 1.74E-46 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M634_15755 e9c06b87a7d11875005bc90eff05a4f2 366 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 346 1.6E-117 T 12-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 M634_15755 e9c06b87a7d11875005bc90eff05a4f2 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 344 2.8E-70 T 12-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 M634_24470 55d9ffd899a343b59e1207f3e228d6b1 478 Pfam PF13437 HlyD family secretion protein 330 442 2.4E-17 T 12-10-2018 M634_24470 55d9ffd899a343b59e1207f3e228d6b1 478 Gene3D G3DSA:2.40.50.100 104 168 4.4E-6 T 12-10-2018 M634_24470 55d9ffd899a343b59e1207f3e228d6b1 478 SUPERFAMILY SSF111369 94 158 1.03E-5 T 12-10-2018 M634_24470 55d9ffd899a343b59e1207f3e228d6b1 478 Pfam PF13533 Biotin-lipoyl like 105 128 8.2E-6 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain M634_24470 55d9ffd899a343b59e1207f3e228d6b1 478 Gene3D G3DSA:2.40.50.100 319 362 6.5E-12 T 12-10-2018 M634_24470 55d9ffd899a343b59e1207f3e228d6b1 478 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 56 478 3.0E-127 T 12-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 M634_24470 55d9ffd899a343b59e1207f3e228d6b1 478 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 375 399 6.1E-65 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 M634_24470 55d9ffd899a343b59e1207f3e228d6b1 478 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 65 88 6.1E-65 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 M634_24470 55d9ffd899a343b59e1207f3e228d6b1 478 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 342 363 6.1E-65 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 M634_24470 55d9ffd899a343b59e1207f3e228d6b1 478 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 399 422 6.1E-65 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 M634_24470 55d9ffd899a343b59e1207f3e228d6b1 478 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 457 477 6.1E-65 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 M634_24470 55d9ffd899a343b59e1207f3e228d6b1 478 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 107 127 6.1E-65 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 M634_24470 55d9ffd899a343b59e1207f3e228d6b1 478 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 442 457 6.1E-65 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 M634_24470 55d9ffd899a343b59e1207f3e228d6b1 478 Gene3D G3DSA:2.40.30.170 363 409 6.5E-12 T 12-10-2018 M634_24470 55d9ffd899a343b59e1207f3e228d6b1 478 ProSitePatterns PS00543 HlyD family secretion proteins signature. 442 464 - T 12-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 M634_07615 0fefa155f6340a242974833a74f2d1fa 346 Pfam PF00155 Aminotransferase class I and II 42 337 1.7E-55 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 M634_07615 0fefa155f6340a242974833a74f2d1fa 346 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 345 52.878 T 12-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 M634_07615 0fefa155f6340a242974833a74f2d1fa 346 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 206 215 - T 12-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 M634_07615 0fefa155f6340a242974833a74f2d1fa 346 Gene3D G3DSA:3.90.1150.10 4 336 7.1E-122 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M634_07615 0fefa155f6340a242974833a74f2d1fa 346 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 6 343 6.2E-118 T 12-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 M634_07615 0fefa155f6340a242974833a74f2d1fa 346 SUPERFAMILY SSF53383 10 343 3.03E-74 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_07615 0fefa155f6340a242974833a74f2d1fa 346 Gene3D G3DSA:3.40.640.10 49 253 7.1E-122 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_13150 ef3514b7265186b3827b0d31f92d51b6 593 Gene3D G3DSA:3.30.420.240 392 577 8.3E-12 T 12-10-2018 M634_13150 ef3514b7265186b3827b0d31f92d51b6 593 Pfam PF17289 Terminase RNaseH-like domain 417 576 7.6E-35 T 12-10-2018 IPR035421 Terminase, large subunit gp17-like M634_13150 ef3514b7265186b3827b0d31f92d51b6 593 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 6 63 1.1E-12 T 12-10-2018 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 M634_13150 ef3514b7265186b3827b0d31f92d51b6 593 Pfam PF03237 Terminase-like family 169 390 1.7E-63 T 12-10-2018 IPR004921 Terminase large subunit, T4likevirus-type M634_13150 ef3514b7265186b3827b0d31f92d51b6 593 Gene3D G3DSA:3.40.50.300 84 311 1.8E-22 T 12-10-2018 M634_13960 a1cadd3fdee7378dbfb047d0f45419be 280 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 238 264 - T 12-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 M634_13960 a1cadd3fdee7378dbfb047d0f45419be 280 Pfam PF01148 Cytidylyltransferase family 2 280 4.0E-70 T 12-10-2018 M634_13640 b411291b7ee311009155f3dd5f9057cb 351 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 20 349 4.8E-98 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 M634_13640 b411291b7ee311009155f3dd5f9057cb 351 SUPERFAMILY SSF48029 26 135 2.75E-20 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical M634_13640 b411291b7ee311009155f3dd5f9057cb 351 Pfam PF14841 FliG middle domain 134 206 4.5E-26 T 12-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain M634_13640 b411291b7ee311009155f3dd5f9057cb 351 PIRSF PIRSF003161 18 351 1.0E-114 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 M634_13640 b411291b7ee311009155f3dd5f9057cb 351 Gene3D G3DSA:1.10.220.30 214 351 1.7E-43 T 12-10-2018 M634_13640 b411291b7ee311009155f3dd5f9057cb 351 Gene3D G3DSA:1.10.220.30 108 212 2.4E-29 T 12-10-2018 M634_13640 b411291b7ee311009155f3dd5f9057cb 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 214 239 1.0E-59 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 M634_13640 b411291b7ee311009155f3dd5f9057cb 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 53 79 1.0E-59 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 M634_13640 b411291b7ee311009155f3dd5f9057cb 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 24 40 1.0E-59 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 M634_13640 b411291b7ee311009155f3dd5f9057cb 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 267 287 1.0E-59 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 M634_13640 b411291b7ee311009155f3dd5f9057cb 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 245 265 1.0E-59 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 M634_13640 b411291b7ee311009155f3dd5f9057cb 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 133 156 1.0E-59 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 M634_13640 b411291b7ee311009155f3dd5f9057cb 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 291 317 1.0E-59 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 M634_13640 b411291b7ee311009155f3dd5f9057cb 351 Gene3D G3DSA:1.10.220.30 19 103 2.3E-18 T 12-10-2018 M634_13640 b411291b7ee311009155f3dd5f9057cb 351 SUPERFAMILY SSF48029 133 344 5.23E-67 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical M634_13640 b411291b7ee311009155f3dd5f9057cb 351 Pfam PF01706 FliG C-terminal domain 236 343 5.2E-41 T 12-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal M634_13640 b411291b7ee311009155f3dd5f9057cb 351 Pfam PF14842 FliG N-terminal domain 24 124 1.9E-28 T 12-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain M634_05485 66f042aa00b4d52c14ba96ad8bcbb4a1 416 Pfam PF00464 Serine hydroxymethyltransferase 8 385 2.0E-183 T 12-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 M634_05485 66f042aa00b4d52c14ba96ad8bcbb4a1 416 PIRSF PIRSF000412 1 416 2.6E-169 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 M634_05485 66f042aa00b4d52c14ba96ad8bcbb4a1 416 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 416 52.536 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 M634_05485 66f042aa00b4d52c14ba96ad8bcbb4a1 416 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 12-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 M634_05485 66f042aa00b4d52c14ba96ad8bcbb4a1 416 SUPERFAMILY SSF53383 6 415 3.85E-185 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_05485 66f042aa00b4d52c14ba96ad8bcbb4a1 416 Gene3D G3DSA:3.40.640.10 37 288 1.1E-187 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_05485 66f042aa00b4d52c14ba96ad8bcbb4a1 416 Gene3D G3DSA:3.90.1150.10 10 396 1.1E-187 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M634_13075 8de4e807e026db715522286136f3eed6 628 Pfam PF10145 Phage-related minor tail protein 88 284 4.8E-27 T 12-10-2018 IPR010090 Phage tail tape measure protein M634_13075 8de4e807e026db715522286136f3eed6 628 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 49 389 1.0E-23 T 12-10-2018 IPR010090 Phage tail tape measure protein M634_20920 47a83303cd7c5620d70949ceff5ef7c6 535 Pfam PF01039 Carboxyl transferase domain 48 525 1.2E-151 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 M634_20920 47a83303cd7c5620d70949ceff5ef7c6 535 Gene3D G3DSA:3.90.226.10 273 535 1.0E-103 T 12-10-2018 M634_20920 47a83303cd7c5620d70949ceff5ef7c6 535 SUPERFAMILY SSF52096 237 517 8.16E-86 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily M634_20920 47a83303cd7c5620d70949ceff5ef7c6 535 Gene3D G3DSA:3.90.226.10 1 270 1.0E-97 T 12-10-2018 M634_20920 47a83303cd7c5620d70949ceff5ef7c6 535 SUPERFAMILY SSF52096 24 267 1.11E-72 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily M634_08035 e17fd3cea2daff38256cdd8940a3fed0 223 Pfam PF00005 ABC transporter 21 167 6.2E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_08035 e17fd3cea2daff38256cdd8940a3fed0 223 SUPERFAMILY SSF52540 1 217 2.23E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_08035 e17fd3cea2daff38256cdd8940a3fed0 223 SMART SM00382 30 218 5.9E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_08035 e17fd3cea2daff38256cdd8940a3fed0 223 Gene3D G3DSA:3.40.50.300 1 223 1.4E-57 T 12-10-2018 M634_08035 e17fd3cea2daff38256cdd8940a3fed0 223 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_08845 151e838636cedc33ddb4b3f1dfb48f1c 361 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 157 314 4.1E-24 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_08845 151e838636cedc33ddb4b3f1dfb48f1c 361 SUPERFAMILY SSF161098 136 318 3.92E-41 T 12-10-2018 IPR035906 MetI-like superfamily M634_08845 151e838636cedc33ddb4b3f1dfb48f1c 361 Gene3D G3DSA:1.10.3720.10 132 321 1.9E-36 T 12-10-2018 IPR035906 MetI-like superfamily M634_10355 e84ef2944968d52c43f873cc365d4118 502 Pfam PF00563 EAL domain 264 489 6.6E-52 T 12-10-2018 IPR001633 EAL domain M634_10355 e84ef2944968d52c43f873cc365d4118 502 Gene3D G3DSA:3.20.20.450 257 497 6.0E-65 T 12-10-2018 IPR035919 EAL domain superfamily M634_10355 e84ef2944968d52c43f873cc365d4118 502 SUPERFAMILY SSF141868 264 496 2.88E-64 T 12-10-2018 IPR035919 EAL domain superfamily M634_10355 e84ef2944968d52c43f873cc365d4118 502 SMART SM00052 256 494 1.0E-66 T 12-10-2018 IPR001633 EAL domain M634_03250 46ffd02714fe52feb90c9585bc66328a 181 Pfam PF05036 Sporulation related domain 107 176 3.3E-14 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 M634_03250 46ffd02714fe52feb90c9585bc66328a 181 Gene3D G3DSA:3.30.70.1070 101 179 4.2E-28 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 M634_03250 46ffd02714fe52feb90c9585bc66328a 181 TIGRFAM TIGR02223 ftsN: cell division protein FtsN 100 178 7.5E-33 T 12-10-2018 IPR011930 Cell division protein FtsN GO:0005515 M634_03250 46ffd02714fe52feb90c9585bc66328a 181 TIGRFAM TIGR02223 ftsN: cell division protein FtsN 2 100 1.5E-31 T 12-10-2018 IPR011930 Cell division protein FtsN GO:0005515 M634_03250 46ffd02714fe52feb90c9585bc66328a 181 SUPERFAMILY SSF110997 106 177 3.4E-17 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 M634_14420 eadebec42ef3787859848a99f7acbd00 370 Pfam PF14378 PAP2 superfamily 146 354 2.2E-41 T 12-10-2018 IPR026841 Inositolphosphotransferase Aur1/Ipt1 M634_19275 a63827a7ecb7de9cd6dfbe462265a7e6 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 63 195 1.3E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M634_19275 a63827a7ecb7de9cd6dfbe462265a7e6 224 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 3 222 1.1E-86 T 12-10-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 M634_19275 a63827a7ecb7de9cd6dfbe462265a7e6 224 Gene3D G3DSA:1.10.150.240 16 95 2.1E-64 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 M634_19275 a63827a7ecb7de9cd6dfbe462265a7e6 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 96 189 1.5E-15 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M634_19275 a63827a7ecb7de9cd6dfbe462265a7e6 224 Gene3D G3DSA:3.40.50.1000 5 218 2.1E-64 T 12-10-2018 IPR023214 HAD superfamily M634_19275 a63827a7ecb7de9cd6dfbe462265a7e6 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 184 197 6.3E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M634_19275 a63827a7ecb7de9cd6dfbe462265a7e6 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 6.3E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M634_19275 a63827a7ecb7de9cd6dfbe462265a7e6 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 6.3E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M634_19275 a63827a7ecb7de9cd6dfbe462265a7e6 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 6.3E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M634_19275 a63827a7ecb7de9cd6dfbe462265a7e6 224 SUPERFAMILY SSF56784 2 222 2.9E-49 T 12-10-2018 IPR036412 HAD-like superfamily M634_19275 a63827a7ecb7de9cd6dfbe462265a7e6 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 194 1.9E-23 T 12-10-2018 M634_04665 a43df60f994572fbe48595a9551e420b 242 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 240 37.401 T 12-10-2018 IPR017689 Outer membrane protein assembly factor BamD M634_04665 a43df60f994572fbe48595a9551e420b 242 Pfam PF13525 Outer membrane lipoprotein 26 232 1.5E-79 T 12-10-2018 IPR039565 Outer membrane lipoprotein BamD-like M634_04665 a43df60f994572fbe48595a9551e420b 242 Gene3D G3DSA:1.25.40.10 28 242 6.5E-54 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_04665 a43df60f994572fbe48595a9551e420b 242 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 5 239 3.6E-80 T 12-10-2018 IPR017689 Outer membrane protein assembly factor BamD M634_04665 a43df60f994572fbe48595a9551e420b 242 SUPERFAMILY SSF48452 30 119 6.07E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_21625 6b4bf25c4010a7a56904adc6a8759269 77 Pfam PF06742 Protein of unknown function (DUF1214) 2 61 8.0E-13 T 12-10-2018 IPR010621 Domain of unknown function DUF1214 M634_21625 6b4bf25c4010a7a56904adc6a8759269 77 Gene3D G3DSA:2.60.120.600 1 77 1.1E-31 T 12-10-2018 IPR037049 Domain of unknown function DUF1214, C-terminal domain superfamily M634_21625 6b4bf25c4010a7a56904adc6a8759269 77 SUPERFAMILY SSF160935 2 76 1.31E-26 T 12-10-2018 M634_20410 eb7f9189f7471cca7117d76a4e9968b0 325 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 118 4.1E-25 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 M634_20410 eb7f9189f7471cca7117d76a4e9968b0 325 SUPERFAMILY SSF51735 2 134 1.9E-44 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_20410 eb7f9189f7471cca7117d76a4e9968b0 325 Gene3D G3DSA:3.30.360.10 135 325 2.3E-51 T 12-10-2018 M634_20410 eb7f9189f7471cca7117d76a4e9968b0 325 SUPERFAMILY SSF55347 127 289 7.36E-23 T 12-10-2018 M634_20410 eb7f9189f7471cca7117d76a4e9968b0 325 Gene3D G3DSA:3.40.50.720 1 134 5.9E-37 T 12-10-2018 M634_05285 e5a7ceae8b07e08cda9e808a6667544b 154 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 153 37.91 T 12-10-2018 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 M634_05285 e5a7ceae8b07e08cda9e808a6667544b 154 Gene3D G3DSA:3.40.50.2020 1 152 1.7E-41 T 12-10-2018 M634_05285 e5a7ceae8b07e08cda9e808a6667544b 154 SUPERFAMILY SSF53271 5 146 8.95E-28 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like M634_05285 e5a7ceae8b07e08cda9e808a6667544b 154 Pfam PF00156 Phosphoribosyl transferase domain 28 145 2.3E-13 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 M634_14595 17c33db8d7c9f5bcbb717c5c77b51f43 167 SUPERFAMILY SSF55729 1 127 5.48E-27 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_14595 17c33db8d7c9f5bcbb717c5c77b51f43 167 Pfam PF13527 Acetyltransferase (GNAT) domain 3 123 6.1E-9 T 12-10-2018 M634_14595 17c33db8d7c9f5bcbb717c5c77b51f43 167 Gene3D G3DSA:3.40.630.30 1 167 5.1E-46 T 12-10-2018 M634_17860 445fc692bbb9defba291f99802b30823 365 Gene3D G3DSA:1.25.40.10 15 231 3.7E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_17860 445fc692bbb9defba291f99802b30823 365 Pfam PF02698 DUF218 domain 194 320 1.4E-19 T 12-10-2018 IPR003848 Domain of unknown function DUF218 M634_17860 445fc692bbb9defba291f99802b30823 365 SUPERFAMILY SSF48452 85 152 1.06E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_19670 91f7fafb84975e8466d5a0dcd1679673 160 SUPERFAMILY SSF55068 2 149 5.23E-51 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 M634_19670 91f7fafb84975e8466d5a0dcd1679673 160 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 3 146 6.5E-33 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 M634_19670 91f7fafb84975e8466d5a0dcd1679673 160 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 2 152 27.656 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 M634_19670 91f7fafb84975e8466d5a0dcd1679673 160 Pfam PF01625 Peptide methionine sulfoxide reductase 5 147 1.3E-44 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 M634_19670 91f7fafb84975e8466d5a0dcd1679673 160 Gene3D G3DSA:3.30.1060.10 1 155 2.5E-43 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 M634_24730 1e1fb172b8694f8995cdac1744d29889 71 Gene3D G3DSA:2.30.330.10 1 71 1.3E-14 T 12-10-2018 IPR036429 SpoA-like superfamily M634_24730 1e1fb172b8694f8995cdac1744d29889 71 SUPERFAMILY SSF101801 2 66 5.23E-14 T 12-10-2018 IPR036429 SpoA-like superfamily M634_24730 1e1fb172b8694f8995cdac1744d29889 71 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 1 66 4.2E-15 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) M634_05925 1f4e8a9ab739f5f3492005286b86436d 308 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 10 305 4.7E-129 T 12-10-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 M634_05925 1f4e8a9ab739f5f3492005286b86436d 308 PRINTS PR01002 Flagellar protein FlgJ signature 288 306 1.8E-28 T 12-10-2018 M634_05925 1f4e8a9ab739f5f3492005286b86436d 308 PRINTS PR01002 Flagellar protein FlgJ signature 223 244 1.8E-28 T 12-10-2018 M634_05925 1f4e8a9ab739f5f3492005286b86436d 308 PRINTS PR01002 Flagellar protein FlgJ signature 182 200 1.8E-28 T 12-10-2018 M634_05925 1f4e8a9ab739f5f3492005286b86436d 308 PRINTS PR01002 Flagellar protein FlgJ signature 245 266 1.8E-28 T 12-10-2018 M634_05925 1f4e8a9ab739f5f3492005286b86436d 308 PRINTS PR01002 Flagellar protein FlgJ signature 79 101 1.8E-28 T 12-10-2018 M634_05925 1f4e8a9ab739f5f3492005286b86436d 308 PRINTS PR01002 Flagellar protein FlgJ signature 31 54 1.8E-28 T 12-10-2018 M634_05925 1f4e8a9ab739f5f3492005286b86436d 308 Gene3D G3DSA:1.10.530.10 160 306 1.9E-46 T 12-10-2018 M634_05925 1f4e8a9ab739f5f3492005286b86436d 308 Pfam PF10135 Rod binding protein 53 102 3.7E-15 T 12-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal M634_05925 1f4e8a9ab739f5f3492005286b86436d 308 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 169 305 2.7E-21 T 12-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 M634_05925 1f4e8a9ab739f5f3492005286b86436d 308 SMART SM00047 146 307 6.2E-49 T 12-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 M634_21075 beb1842f9d73049df94620fe284da950 225 Pfam PF09335 SNARE associated Golgi protein 54 173 7.8E-17 T 12-10-2018 IPR032816 SNARE associated Golgi protein M634_13015 7ba0377cf8a5a5462b817e7d475c7b5f 94 SUPERFAMILY SSF54909 1 93 1.46E-28 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel M634_13015 7ba0377cf8a5a5462b817e7d475c7b5f 94 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 75 9.4E-20 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain M634_13015 7ba0377cf8a5a5462b817e7d475c7b5f 94 Gene3D G3DSA:3.30.70.100 1 94 8.9E-30 T 12-10-2018 M634_15965 83edae8821c8bc66595f3d35abe49a5f 1292 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 7 1280 0.0 T 12-10-2018 IPR011836 Conserved hypothetical protein CHP02099 M634_15965 83edae8821c8bc66595f3d35abe49a5f 1292 Pfam PF13502 AsmA-like C-terminal region 1030 1270 5.6E-57 T 12-10-2018 IPR032712 AsmA-like, C-terminal M634_15965 83edae8821c8bc66595f3d35abe49a5f 1292 Pfam PF13116 Protein of unknown function 506 792 3.0E-94 T 12-10-2018 IPR025263 Domain of unknown function DUF3971 M634_07970 794c27336a9ea7e1ba09adb2723b5d2f 141 Gene3D G3DSA:3.10.450.40 74 129 2.4E-6 T 12-10-2018 M634_21820 70a66d69951146ecd414978de6cd02d1 142 Pfam PF03061 Thioesterase superfamily 59 109 5.1E-5 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 M634_21820 70a66d69951146ecd414978de6cd02d1 142 Gene3D G3DSA:3.10.129.10 4 142 7.7E-25 T 12-10-2018 M634_21820 70a66d69951146ecd414978de6cd02d1 142 SUPERFAMILY SSF54637 13 137 1.5E-22 T 12-10-2018 IPR029069 HotDog domain superfamily M634_06355 59ff60715d17d594c86dc19341dfc751 563 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 544 1.6E-17 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain M634_06355 59ff60715d17d594c86dc19341dfc751 563 Gene3D G3DSA:3.30.300.310 458 559 5.6E-30 T 12-10-2018 M634_06355 59ff60715d17d594c86dc19341dfc751 563 SUPERFAMILY SSF56801 13 553 4.06E-150 T 12-10-2018 M634_06355 59ff60715d17d594c86dc19341dfc751 563 Gene3D G3DSA:3.40.50.12780 9 457 7.8E-118 T 12-10-2018 M634_06355 59ff60715d17d594c86dc19341dfc751 563 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 12-10-2018 IPR020845 AMP-binding, conserved site M634_06355 59ff60715d17d594c86dc19341dfc751 563 Pfam PF00501 AMP-binding enzyme 29 461 2.7E-107 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 M634_12365 10a7b8e335c552f73a67dd9aa0f57c58 230 SUPERFAMILY SSF52540 49 159 1.17E-27 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_12365 10a7b8e335c552f73a67dd9aa0f57c58 230 Gene3D G3DSA:3.40.50.300 52 158 2.4E-27 T 12-10-2018 M634_12365 10a7b8e335c552f73a67dd9aa0f57c58 230 Pfam PF00154 recA bacterial DNA recombination protein 29 125 1.3E-5 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 M634_12365 10a7b8e335c552f73a67dd9aa0f57c58 230 PIRSF PIRSF037290 1 230 4.7E-80 T 12-10-2018 IPR017166 Uncharacterised conserved protein UCP037290 M634_03035 788b5c221513a54393adb62a76c7ac88 201 Gene3D G3DSA:2.160.10.10 25 194 5.2E-32 T 12-10-2018 M634_03035 788b5c221513a54393adb62a76c7ac88 201 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 145 179 1.9E-11 T 12-10-2018 IPR001451 Hexapeptide repeat M634_03035 788b5c221513a54393adb62a76c7ac88 201 SUPERFAMILY SSF51161 15 188 1.02E-27 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily M634_19405 44641ca947dabbab5c43ee2503f368e3 374 SUPERFAMILY SSF53187 106 372 1.82E-63 T 12-10-2018 M634_19405 44641ca947dabbab5c43ee2503f368e3 374 Gene3D G3DSA:2.60.40.3120 1 112 1.2E-42 T 12-10-2018 M634_19405 44641ca947dabbab5c43ee2503f368e3 374 Pfam PF00246 Zinc carboxypeptidase 125 341 2.6E-24 T 12-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 M634_19405 44641ca947dabbab5c43ee2503f368e3 374 Gene3D G3DSA:3.40.630.10 113 374 4.8E-72 T 12-10-2018 M634_19405 44641ca947dabbab5c43ee2503f368e3 374 SMART SM00631 112 362 1.7E-4 T 12-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 M634_02345 94630e1e224e5f453ca924b453437f2a 279 Gene3D G3DSA:3.40.50.150 1 279 1.8E-115 T 12-10-2018 M634_02345 94630e1e224e5f453ca924b453437f2a 279 SUPERFAMILY SSF53335 9 274 5.21E-96 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_02345 94630e1e224e5f453ca924b453437f2a 279 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.412 T 12-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 M634_02345 94630e1e224e5f453ca924b453437f2a 279 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 277 1.0E-115 T 12-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 M634_15860 4abbb43ad4f9138fbc24759a92c25f91 321 Gene3D G3DSA:1.20.1420.30 35 308 1.2E-86 T 12-10-2018 M634_15860 4abbb43ad4f9138fbc24759a92c25f91 321 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 3 311 1.4E-83 T 12-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 M634_15860 4abbb43ad4f9138fbc24759a92c25f91 321 Gene3D G3DSA:1.20.58.1130 8 206 1.2E-86 T 12-10-2018 M634_15860 4abbb43ad4f9138fbc24759a92c25f91 321 Pfam PF01699 Sodium/calcium exchanger protein 175 316 3.0E-29 T 12-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 M634_15860 4abbb43ad4f9138fbc24759a92c25f91 321 Pfam PF01699 Sodium/calcium exchanger protein 5 143 3.7E-27 T 12-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 M634_12395 85fe0608a3c9a0181678607f988bac1d 383 SUPERFAMILY SSF52151 25 304 2.88E-35 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase M634_12395 85fe0608a3c9a0181678607f988bac1d 383 Gene3D G3DSA:3.40.1090.10 138 265 5.1E-6 T 12-10-2018 M634_12395 85fe0608a3c9a0181678607f988bac1d 383 Gene3D G3DSA:3.40.1090.10 16 133 6.0E-11 T 12-10-2018 M634_12395 85fe0608a3c9a0181678607f988bac1d 383 Pfam PF01734 Patatin-like phospholipase 30 199 2.0E-19 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 M634_03160 539462e25c74ce1d99dcdc58720b926c 215 Gene3D G3DSA:2.160.10.10 92 205 9.8E-32 T 12-10-2018 M634_03160 539462e25c74ce1d99dcdc58720b926c 215 SUPERFAMILY SSF51161 8 213 3.19E-37 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily M634_03160 539462e25c74ce1d99dcdc58720b926c 215 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 120 154 6.5E-6 T 12-10-2018 IPR001451 Hexapeptide repeat M634_03160 539462e25c74ce1d99dcdc58720b926c 215 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 8 210 2.3E-55 T 12-10-2018 IPR020019 Sialic acid O-acyltransferase NeuD-like M634_03160 539462e25c74ce1d99dcdc58720b926c 215 Gene3D G3DSA:3.40.50.20 2 90 5.8E-22 T 12-10-2018 M634_00410 9e0e12bb67758a7965da5d7c3a123320 674 SMART SM00382 372 538 1.1E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_00410 9e0e12bb67758a7965da5d7c3a123320 674 SMART SM00382 61 258 9.5E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_00410 9e0e12bb67758a7965da5d7c3a123320 674 Pfam PF00005 ABC transporter 363 494 3.7E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_00410 9e0e12bb67758a7965da5d7c3a123320 674 Gene3D G3DSA:3.40.50.300 311 575 2.7E-55 T 12-10-2018 M634_00410 9e0e12bb67758a7965da5d7c3a123320 674 SUPERFAMILY SSF52540 312 529 6.76E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_00410 9e0e12bb67758a7965da5d7c3a123320 674 Pfam PF12848 ABC transporter 252 330 2.2E-27 T 12-10-2018 IPR032781 ABC-transporter extension domain M634_00410 9e0e12bb67758a7965da5d7c3a123320 674 Pfam PF00005 ABC transporter 52 213 7.3E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_00410 9e0e12bb67758a7965da5d7c3a123320 674 ProSitePatterns PS00211 ABC transporters family signature. 466 480 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_00410 9e0e12bb67758a7965da5d7c3a123320 674 SUPERFAMILY SSF52540 30 293 8.04E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_00410 9e0e12bb67758a7965da5d7c3a123320 674 Gene3D G3DSA:3.40.50.300 42 308 1.9E-58 T 12-10-2018 M634_00410 9e0e12bb67758a7965da5d7c3a123320 674 ProSitePatterns PS00211 ABC transporters family signature. 185 199 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_17520 f9b12a3b377ad2fd95c53f82d88c3af6 155 Pfam PF07670 Nucleoside recognition 31 124 8.4E-7 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 M634_06910 65b3f3c2cfb3c23215b426db66044499 169 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 23 164 3.3E-45 T 12-10-2018 IPR018639 Domain of unknown function DUF2062 M634_19920 77c51d39e0f68821fc2f274b452772fc 539 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 48 524 6.6E-144 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 M634_03550 75a1b68650bb38d6b3b73a23761e88a3 338 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 6 197 1.9E-75 T 12-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 M634_03550 75a1b68650bb38d6b3b73a23761e88a3 338 PIRSF PIRSF000904 1 337 5.0E-127 T 12-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 M634_03550 75a1b68650bb38d6b3b73a23761e88a3 338 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 5 333 43.15 T 12-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 M634_03550 75a1b68650bb38d6b3b73a23761e88a3 338 SUPERFAMILY SSF56655 3 331 7.89E-115 T 12-10-2018 M634_03550 75a1b68650bb38d6b3b73a23761e88a3 338 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 273 285 - T 12-10-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 M634_03550 75a1b68650bb38d6b3b73a23761e88a3 338 PIRSF PIRSF500210 1 336 7.6E-130 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 M634_03550 75a1b68650bb38d6b3b73a23761e88a3 338 Gene3D G3DSA:3.40.190.80 200 336 1.4E-60 T 12-10-2018 M634_03550 75a1b68650bb38d6b3b73a23761e88a3 338 Gene3D G3DSA:3.30.540.10 4 198 2.4E-76 T 12-10-2018 M634_03550 75a1b68650bb38d6b3b73a23761e88a3 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 151 174 2.8E-75 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 M634_03550 75a1b68650bb38d6b3b73a23761e88a3 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 182 205 2.8E-75 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 M634_03550 75a1b68650bb38d6b3b73a23761e88a3 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 307 332 2.8E-75 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 M634_03550 75a1b68650bb38d6b3b73a23761e88a3 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 208 235 2.8E-75 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 M634_03550 75a1b68650bb38d6b3b73a23761e88a3 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 30 57 2.8E-75 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 M634_03550 75a1b68650bb38d6b3b73a23761e88a3 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 67 93 2.8E-75 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 M634_07355 f6963b3e10d6ccac873ab6bc4c67134e 304 SUPERFAMILY SSF110849 45 120 4.53E-5 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily M634_07355 f6963b3e10d6ccac873ab6bc4c67134e 304 SMART SM00470 8 120 0.005 T 12-10-2018 IPR003115 ParB/Sulfiredoxin M634_20470 1343bc968a281e908679d7a1f5912d04 220 Pfam PF12945 Flagellar protein YcgR 15 105 7.1E-13 T 12-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal M634_20470 1343bc968a281e908679d7a1f5912d04 220 SUPERFAMILY SSF141371 3 115 6.28E-30 T 12-10-2018 M634_20470 1343bc968a281e908679d7a1f5912d04 220 Gene3D G3DSA:2.30.110.10 3 112 6.5E-11 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 M634_20470 1343bc968a281e908679d7a1f5912d04 220 Gene3D G3DSA:2.40.10.220 113 212 8.7E-6 T 12-10-2018 M634_20470 1343bc968a281e908679d7a1f5912d04 220 Pfam PF07238 PilZ domain 113 204 9.0E-12 T 12-10-2018 IPR009875 PilZ domain GO:0035438 M634_20470 1343bc968a281e908679d7a1f5912d04 220 SUPERFAMILY SSF141371 116 217 2.55E-17 T 12-10-2018 M634_20940 f5b2003a7793f68087f7b6dc185032da 497 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 5 481 9.1E-242 T 12-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 M634_20940 f5b2003a7793f68087f7b6dc185032da 497 Gene3D G3DSA:3.40.605.10 24 458 1.7E-141 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 M634_20940 f5b2003a7793f68087f7b6dc185032da 497 Pfam PF00171 Aldehyde dehydrogenase family 17 477 6.1E-138 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 M634_20940 f5b2003a7793f68087f7b6dc185032da 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 M634_20940 f5b2003a7793f68087f7b6dc185032da 497 SUPERFAMILY SSF53720 2 483 1.96E-143 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 M634_20940 f5b2003a7793f68087f7b6dc185032da 497 Gene3D G3DSA:3.40.309.10 250 450 1.7E-141 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 M634_03690 89c0690983dbd59d79203f6a75410c34 200 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 44.355 T 12-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 M634_03690 89c0690983dbd59d79203f6a75410c34 200 Gene3D G3DSA:3.20.19.10 1 180 1.6E-77 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 M634_03690 89c0690983dbd59d79203f6a75410c34 200 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 188 2.9E-99 T 12-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 M634_03690 89c0690983dbd59d79203f6a75410c34 200 Pfam PF00694 Aconitase C-terminal domain 1 125 3.1E-39 T 12-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 M634_03690 89c0690983dbd59d79203f6a75410c34 200 SUPERFAMILY SSF52016 1 196 1.26E-59 T 12-10-2018 M634_18910 1249b03ec1417738da5a6ec124447dbf 244 SUPERFAMILY SSF52540 5 227 1.15E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_18910 1249b03ec1417738da5a6ec124447dbf 244 SMART SM00382 30 214 5.6E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_18910 1249b03ec1417738da5a6ec124447dbf 244 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_18910 1249b03ec1417738da5a6ec124447dbf 244 Pfam PF00005 ABC transporter 21 166 2.6E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_18910 1249b03ec1417738da5a6ec124447dbf 244 Gene3D G3DSA:3.40.50.300 3 243 6.4E-55 T 12-10-2018 M634_16270 2dfd3de4e99aafab3a003dfb72d4558d 179 Gene3D G3DSA:3.30.70.1530 23 85 5.6E-6 T 12-10-2018 M634_24510 4d4d451ea03f34d9bd4d44b7910c1308 174 SUPERFAMILY SSF56399 2 41 5.25E-10 T 12-10-2018 M634_24510 4d4d451ea03f34d9bd4d44b7910c1308 174 Gene3D G3DSA:3.90.175.10 1 81 1.6E-5 T 12-10-2018 M634_20745 1f91076fe83177a60313599ede5b03e2 135 Gene3D G3DSA:1.10.260.40 2 66 7.3E-6 T 12-10-2018 M634_20745 1f91076fe83177a60313599ede5b03e2 135 SUPERFAMILY SSF47413 2 61 7.13E-6 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M634_21745 0847a84e329db23471e87ddfb2b51cc3 470 Pfam PF00171 Aldehyde dehydrogenase family 31 440 2.0E-97 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 M634_21745 0847a84e329db23471e87ddfb2b51cc3 470 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 217 224 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 M634_21745 0847a84e329db23471e87ddfb2b51cc3 470 SUPERFAMILY SSF53720 14 441 3.53E-122 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 M634_21745 0847a84e329db23471e87ddfb2b51cc3 470 Gene3D G3DSA:3.40.309.10 221 420 4.8E-158 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 M634_21745 0847a84e329db23471e87ddfb2b51cc3 470 Gene3D G3DSA:3.40.605.10 22 440 4.8E-158 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 M634_21745 0847a84e329db23471e87ddfb2b51cc3 470 PIRSF PIRSF036492 2 469 1.2E-163 T 12-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 M634_01020 65404a86db4fa0242add40f2285e8dbf 232 PIRSF PIRSF028160 1 232 6.8E-126 T 12-10-2018 IPR016872 Uncharacterised conserved protein UCP028160 M634_01020 65404a86db4fa0242add40f2285e8dbf 232 Pfam PF07356 Protein of unknown function (DUF1481) 34 228 6.6E-57 T 12-10-2018 IPR010858 Protein of unknown function DUF1481 M634_21990 ec14fec0b07769ea014c2584e647e6f0 207 SUPERFAMILY SSF47413 26 90 1.47E-14 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M634_21990 ec14fec0b07769ea014c2584e647e6f0 207 SUPERFAMILY SSF51182 97 204 1.44E-25 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily M634_21990 ec14fec0b07769ea014c2584e647e6f0 207 Gene3D G3DSA:2.60.120.10 94 205 1.7E-26 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M634_21990 ec14fec0b07769ea014c2584e647e6f0 207 Pfam PF01381 Helix-turn-helix 32 84 1.4E-11 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 M634_21990 ec14fec0b07769ea014c2584e647e6f0 207 Pfam PF07883 Cupin domain 147 204 1.1E-10 T 12-10-2018 IPR013096 Cupin 2, conserved barrel M634_21990 ec14fec0b07769ea014c2584e647e6f0 207 SMART SM00530 31 86 1.3E-12 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 M634_21990 ec14fec0b07769ea014c2584e647e6f0 207 Gene3D G3DSA:1.10.260.40 26 93 2.5E-15 T 12-10-2018 M634_03575 c1fcc08326d94acc2147e85a1900c860 234 SMART SM00382 24 207 1.7E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_03575 c1fcc08326d94acc2147e85a1900c860 234 SUPERFAMILY SSF52540 1 230 6.12E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_03575 c1fcc08326d94acc2147e85a1900c860 234 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 M634_03575 c1fcc08326d94acc2147e85a1900c860 234 Pfam PF00005 ABC transporter 18 157 6.9E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_03575 c1fcc08326d94acc2147e85a1900c860 234 Gene3D G3DSA:3.40.50.300 1 233 2.8E-61 T 12-10-2018 M634_03575 c1fcc08326d94acc2147e85a1900c860 234 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 212 6.5E-102 T 12-10-2018 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0016021|GO:0042626|GO:0071934 M634_18935 54075c01b1afa8f51e8e8d874cfce23b 401 SUPERFAMILY SSF103473 11 389 4.71E-57 T 12-10-2018 IPR036259 MFS transporter superfamily M634_18935 54075c01b1afa8f51e8e8d874cfce23b 401 Gene3D G3DSA:1.20.1720.10 10 387 5.4E-97 T 12-10-2018 M634_18935 54075c01b1afa8f51e8e8d874cfce23b 401 Pfam PF07690 Major Facilitator Superfamily 15 354 3.8E-44 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M634_18935 54075c01b1afa8f51e8e8d874cfce23b 401 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 9 386 2.1E-60 T 12-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 M634_18935 54075c01b1afa8f51e8e8d874cfce23b 401 PRINTS PR01036 Tetracycline resistance protein TetB signature 134 158 2.4E-5 T 12-10-2018 M634_18935 54075c01b1afa8f51e8e8d874cfce23b 401 PRINTS PR01036 Tetracycline resistance protein TetB signature 73 95 2.4E-5 T 12-10-2018 M634_18935 54075c01b1afa8f51e8e8d874cfce23b 401 PRINTS PR01036 Tetracycline resistance protein TetB signature 280 304 2.4E-5 T 12-10-2018 M634_00785 2557d338590b01dce372d7892bb886af 460 Pfam PF01554 MatE 32 191 2.4E-25 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M634_00785 2557d338590b01dce372d7892bb886af 460 Pfam PF01554 MatE 255 416 5.8E-24 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M634_00785 2557d338590b01dce372d7892bb886af 460 TIGRFAM TIGR00797 matE: MATE efflux family protein 32 423 3.2E-57 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M634_00785 2557d338590b01dce372d7892bb886af 460 PIRSF PIRSF006603 6 459 5.4E-132 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M634_00105 493de4d4c96d3a7b3c96b482352f79b8 219 Pfam PF13505 Outer membrane protein beta-barrel domain 9 219 3.1E-8 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel M634_00105 493de4d4c96d3a7b3c96b482352f79b8 219 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 5 219 2.2E-54 T 12-10-2018 IPR026387 Outer membrane protein M634_00175 651a2b034d77ed5ba0c119708376fd32 100 SUPERFAMILY SSF50249 1 99 2.19E-25 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold M634_00175 651a2b034d77ed5ba0c119708376fd32 100 Pfam PF00436 Single-strand binding protein family 3 88 4.4E-7 T 12-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 M634_00175 651a2b034d77ed5ba0c119708376fd32 100 Hamap MF_00720 Primosomal replication protein N [priB]. 2 100 22.81 T 12-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 M634_00175 651a2b034d77ed5ba0c119708376fd32 100 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 3 100 3.0E-31 T 12-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 M634_00175 651a2b034d77ed5ba0c119708376fd32 100 Gene3D G3DSA:2.40.50.140 1 100 6.0E-29 T 12-10-2018 M634_00175 651a2b034d77ed5ba0c119708376fd32 100 PIRSF PIRSF003135 1 100 1.3E-46 T 12-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 M634_02635 4a8cf08d817675a862fcc3a966f69db4 305 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 164 297 1.4E-45 T 12-10-2018 IPR012660 Thioesterase, putative M634_02635 4a8cf08d817675a862fcc3a966f69db4 305 SUPERFAMILY SSF54637 154 296 2.95E-40 T 12-10-2018 IPR029069 HotDog domain superfamily M634_02635 4a8cf08d817675a862fcc3a966f69db4 305 Pfam PF00583 Acetyltransferase (GNAT) family 35 122 9.7E-11 T 12-10-2018 IPR000182 GNAT domain M634_02635 4a8cf08d817675a862fcc3a966f69db4 305 Gene3D G3DSA:3.40.630.30 3 145 7.6E-27 T 12-10-2018 M634_02635 4a8cf08d817675a862fcc3a966f69db4 305 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 157 296 1.0E-52 T 12-10-2018 IPR012660 Thioesterase, putative M634_02635 4a8cf08d817675a862fcc3a966f69db4 305 Gene3D G3DSA:3.10.129.10 147 298 5.6E-48 T 12-10-2018 M634_02635 4a8cf08d817675a862fcc3a966f69db4 305 SUPERFAMILY SSF55729 2 157 8.68E-30 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_03060 10fecefe5f7259f290244a88f3071e5f 329 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 15 304 2.5E-78 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 M634_03060 10fecefe5f7259f290244a88f3071e5f 329 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 7 311 49.178 T 12-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 M634_03060 10fecefe5f7259f290244a88f3071e5f 329 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 13 312 3.9E-110 T 12-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 M634_03060 10fecefe5f7259f290244a88f3071e5f 329 PIRSF PIRSF026649 12 313 3.8E-82 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 M634_02435 b90ff7ebfcb97ce60caa6f0508c521b2 143 Pfam PF09537 Domain of unknown function (DUF2383) 5 111 2.5E-23 T 12-10-2018 IPR019052 Domain of unknown function DUF2383 M634_02435 b90ff7ebfcb97ce60caa6f0508c521b2 143 Gene3D G3DSA:1.20.1260.10 2 140 5.6E-10 T 12-10-2018 IPR012347 Ferritin-like M634_06380 69bc732cb94a84ad80d16bb7c045ebbf 94 Hamap MF_01866 Protein YcgL [ycgL]. 1 87 27.303 T 12-10-2018 IPR027354 YcgL domain M634_06380 69bc732cb94a84ad80d16bb7c045ebbf 94 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 73 1.0E-36 T 12-10-2018 IPR027354 YcgL domain M634_06380 69bc732cb94a84ad80d16bb7c045ebbf 94 Pfam PF05166 YcgL domain 3 74 6.5E-32 T 12-10-2018 IPR027354 YcgL domain M634_06380 69bc732cb94a84ad80d16bb7c045ebbf 94 Gene3D G3DSA:3.10.510.20 1 73 5.3E-30 T 12-10-2018 IPR038068 YcgL-like superfamily M634_06380 69bc732cb94a84ad80d16bb7c045ebbf 94 SUPERFAMILY SSF160191 1 92 1.22E-37 T 12-10-2018 IPR038068 YcgL-like superfamily M634_03100 bc2cc8a28d57cf4701be914c63a035a7 323 Pfam PF02706 Chain length determinant protein 24 126 2.1E-17 T 12-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 M634_09980 e9af46b9c7139cdba7cb4bacf85d817f 126 Gene3D G3DSA:1.20.120.160 4 118 1.6E-19 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 M634_09980 e9af46b9c7139cdba7cb4bacf85d817f 126 Pfam PF01627 Hpt domain 34 109 6.8E-12 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 M634_09980 e9af46b9c7139cdba7cb4bacf85d817f 126 SUPERFAMILY SSF47226 10 118 1.13E-20 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 M634_15325 9f343ef5df2f2ccfeefb8aa7a3129226 86 Pfam PF03937 Flavinator of succinate dehydrogenase 7 77 2.0E-24 T 12-10-2018 IPR005631 Flavinator of succinate dehydrogenase M634_15325 9f343ef5df2f2ccfeefb8aa7a3129226 86 Gene3D G3DSA:1.10.150.250 1 86 3.9E-37 T 12-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily M634_15325 9f343ef5df2f2ccfeefb8aa7a3129226 86 SUPERFAMILY SSF109910 2 79 4.84E-26 T 12-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily M634_15430 2f2f69e0b2dc697edc5667edf2cba2ae 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 6.2E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_15430 2f2f69e0b2dc697edc5667edf2cba2ae 297 Gene3D G3DSA:3.40.190.290 92 289 6.1E-31 T 12-10-2018 M634_15430 2f2f69e0b2dc697edc5667edf2cba2ae 297 Gene3D G3DSA:1.10.10.10 1 91 6.9E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_15430 2f2f69e0b2dc697edc5667edf2cba2ae 297 Pfam PF03466 LysR substrate binding domain 88 289 1.3E-19 T 12-10-2018 IPR005119 LysR, substrate-binding M634_15430 2f2f69e0b2dc697edc5667edf2cba2ae 297 SUPERFAMILY SSF53850 89 291 3.8E-26 T 12-10-2018 M634_15430 2f2f69e0b2dc697edc5667edf2cba2ae 297 SUPERFAMILY SSF46785 2 112 1.16E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_03465 dbe8ec41d80dff8c3f0ae0d143e2a6e8 574 Pfam PF03600 Citrate transporter 29 518 9.3E-30 T 12-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 M634_03465 dbe8ec41d80dff8c3f0ae0d143e2a6e8 574 SUPERFAMILY SSF116726 290 349 5.1E-13 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 M634_03465 dbe8ec41d80dff8c3f0ae0d143e2a6e8 574 Gene3D G3DSA:3.30.70.1450 206 279 3.5E-13 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 M634_03465 dbe8ec41d80dff8c3f0ae0d143e2a6e8 574 Gene3D G3DSA:3.30.70.1450 289 359 1.6E-11 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 M634_03465 dbe8ec41d80dff8c3f0ae0d143e2a6e8 574 Pfam PF02080 TrkA-C domain 293 349 2.1E-11 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 M634_03465 dbe8ec41d80dff8c3f0ae0d143e2a6e8 574 Pfam PF02080 TrkA-C domain 209 276 5.8E-12 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 M634_03465 dbe8ec41d80dff8c3f0ae0d143e2a6e8 574 SUPERFAMILY SSF116726 206 283 2.88E-16 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 M634_07625 f681c056fc2700eeef963e519fc5c76d 204 Gene3D G3DSA:3.40.50.880 2 204 1.1E-73 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M634_07625 f681c056fc2700eeef963e519fc5c76d 204 PIRSF PIRSF000495 4 204 1.2E-64 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 M634_07625 f681c056fc2700eeef963e519fc5c76d 204 Pfam PF00117 Glutamine amidotransferase class-I 8 202 1.4E-17 T 12-10-2018 IPR017926 Glutamine amidotransferase M634_07625 f681c056fc2700eeef963e519fc5c76d 204 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 5 204 33.792 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 M634_07625 f681c056fc2700eeef963e519fc5c76d 204 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 6 203 5.9E-69 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 M634_07625 f681c056fc2700eeef963e519fc5c76d 204 SUPERFAMILY SSF52317 5 203 2.9E-53 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M634_18285 dc88040fe661a21a694fb9eb01df2753 343 SMART SM00387 242 340 2.5E-7 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_18285 dc88040fe661a21a694fb9eb01df2753 343 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 247 339 4.5E-6 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase M634_18285 dc88040fe661a21a694fb9eb01df2753 343 Gene3D G3DSA:3.30.565.10 182 343 4.6E-18 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_18285 dc88040fe661a21a694fb9eb01df2753 343 SUPERFAMILY SSF55874 211 338 7.8E-16 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily M634_18285 dc88040fe661a21a694fb9eb01df2753 343 Pfam PF06580 Histidine kinase 149 227 1.0E-24 T 12-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 M634_17775 ef82393698bd49754249b3bcedf17f36 609 Pfam PF04183 IucA / IucC family 163 383 1.7E-51 T 12-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 M634_17775 ef82393698bd49754249b3bcedf17f36 609 Pfam PF06276 Ferric iron reductase FhuF-like transporter 430 588 1.3E-28 T 12-10-2018 IPR022770 Ferric iron reductase FhuF domain M634_17775 ef82393698bd49754249b3bcedf17f36 609 Gene3D G3DSA:1.10.340.60 497 568 3.2E-20 T 12-10-2018 M634_17775 ef82393698bd49754249b3bcedf17f36 609 Gene3D G3DSA:1.10.150.640 26 149 1.0E-5 T 12-10-2018 M634_17775 ef82393698bd49754249b3bcedf17f36 609 Gene3D G3DSA:3.10.450.440 45 111 1.0E-5 T 12-10-2018 M634_08840 e73f4d12cc0e5eed7c271e6d04b26768 335 Gene3D G3DSA:3.40.190.10 29 330 2.0E-139 T 12-10-2018 M634_08840 e73f4d12cc0e5eed7c271e6d04b26768 335 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 34 317 2.7E-51 T 12-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 M634_08840 e73f4d12cc0e5eed7c271e6d04b26768 335 SUPERFAMILY SSF53850 28 332 4.07E-89 T 12-10-2018 M634_08840 e73f4d12cc0e5eed7c271e6d04b26768 335 Gene3D G3DSA:3.40.190.100 117 258 2.0E-139 T 12-10-2018 M634_02625 5d900ee438e6030ac98f1f7c86e8eb1c 314 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 8 296 23.777 T 12-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial M634_02625 5d900ee438e6030ac98f1f7c86e8eb1c 314 Pfam PF03631 Virulence factor BrkB 33 279 1.5E-58 T 12-10-2018 IPR017039 Virulence factor BrkB M634_02625 5d900ee438e6030ac98f1f7c86e8eb1c 314 PIRSF PIRSF035875 9 296 1.6E-53 T 12-10-2018 IPR017039 Virulence factor BrkB M634_02625 5d900ee438e6030ac98f1f7c86e8eb1c 314 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 21 279 4.9E-81 T 12-10-2018 IPR017039 Virulence factor BrkB M634_03615 3ef43929ebda4198851e0f7557e065b5 333 Gene3D G3DSA:1.10.600.10 4 333 1.8E-119 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily M634_03615 3ef43929ebda4198851e0f7557e065b5 333 SUPERFAMILY SSF48576 12 332 9.89E-99 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily M634_03615 3ef43929ebda4198851e0f7557e065b5 333 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site M634_03615 3ef43929ebda4198851e0f7557e065b5 333 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 91 105 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site M634_03615 3ef43929ebda4198851e0f7557e065b5 333 Pfam PF00348 Polyprenyl synthetase 42 281 9.7E-73 T 12-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 M634_11300 ef51fd0818d5678631f686fc1e9d8512 179 Gene3D G3DSA:3.40.630.30 22 179 1.7E-14 T 12-10-2018 M634_11300 ef51fd0818d5678631f686fc1e9d8512 179 SUPERFAMILY SSF55729 25 175 5.23E-13 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_11300 ef51fd0818d5678631f686fc1e9d8512 179 Pfam PF00583 Acetyltransferase (GNAT) family 43 157 5.6E-5 T 12-10-2018 IPR000182 GNAT domain M634_18880 50f290df2841478f1cb0bb93d6d4f384 209 Pfam PF16357 Putative PepSY_TM-like 10 209 5.5E-67 T 12-10-2018 IPR032307 Putative PepSY TM-like protein M634_13315 3320ec689d6c695c82d672f5faa286ec 368 Gene3D G3DSA:3.60.40.10 164 344 2.8E-6 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 M634_13315 3320ec689d6c695c82d672f5faa286ec 368 SMART SM00448 20 132 1.1E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_13315 3320ec689d6c695c82d672f5faa286ec 368 SUPERFAMILY SSF52172 19 137 1.38E-34 T 12-10-2018 IPR011006 CheY-like superfamily M634_13315 3320ec689d6c695c82d672f5faa286ec 368 Gene3D G3DSA:3.40.50.2300 8 148 3.1E-35 T 12-10-2018 M634_13315 3320ec689d6c695c82d672f5faa286ec 368 Pfam PF00072 Response regulator receiver domain 22 132 7.4E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_07795 d3fb6fc756b8e2870cd6095c292533f9 343 Gene3D G3DSA:2.40.50.100 56 188 1.2E-73 T 12-10-2018 M634_07795 d3fb6fc756b8e2870cd6095c292533f9 343 Gene3D G3DSA:2.40.30.170 41 267 1.2E-73 T 12-10-2018 M634_07795 d3fb6fc756b8e2870cd6095c292533f9 343 Pfam PF13437 HlyD family secretion protein 154 250 8.7E-10 T 12-10-2018 M634_07795 d3fb6fc756b8e2870cd6095c292533f9 343 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 337 1.5E-84 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 M634_07795 d3fb6fc756b8e2870cd6095c292533f9 343 Gene3D G3DSA:1.10.287.470 90 149 1.2E-73 T 12-10-2018 M634_07795 d3fb6fc756b8e2870cd6095c292533f9 343 Gene3D G3DSA:2.40.420.20 35 334 1.2E-73 T 12-10-2018 M634_07795 d3fb6fc756b8e2870cd6095c292533f9 343 Pfam PF13533 Biotin-lipoyl like 61 104 6.5E-11 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain M634_07795 d3fb6fc756b8e2870cd6095c292533f9 343 SUPERFAMILY SSF111369 47 264 8.76E-33 T 12-10-2018 M634_19825 f4936b34318c70978311798db625eca0 298 Gene3D G3DSA:1.25.40.10 112 294 3.9E-16 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_19825 f4936b34318c70978311798db625eca0 298 SMART SM00028 201 234 13.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_19825 f4936b34318c70978311798db625eca0 298 SMART SM00028 235 268 0.0055 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 M634_19825 f4936b34318c70978311798db625eca0 298 SUPERFAMILY SSF48452 187 297 6.45E-17 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_08255 810af036702acc256655ca9c79cd0bdb 153 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 109 153 2.0E-20 T 12-10-2018 M634_08255 810af036702acc256655ca9c79cd0bdb 153 Gene3D G3DSA:1.20.120.1630 3 153 6.3E-23 T 12-10-2018 M634_08255 810af036702acc256655ca9c79cd0bdb 153 Pfam PF04191 Phospholipid methyltransferase 40 142 1.5E-12 T 12-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 M634_15070 097e880333c3c16abf740f6e904129b9 203 Gene3D G3DSA:1.10.530.10 38 198 9.0E-15 T 12-10-2018 M634_15070 097e880333c3c16abf740f6e904129b9 203 SUPERFAMILY SSF53955 16 168 9.52E-23 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily M634_05035 6df95e76c8786b87fff3e6affcff54cd 325 PIRSF PIRSF015558 11 297 3.0E-64 T 12-10-2018 IPR016634 WYL domain protein, s026 type M634_05035 6df95e76c8786b87fff3e6affcff54cd 325 Pfam PF13280 WYL domain 126 216 8.9E-8 T 12-10-2018 IPR026881 WYL domain M634_22335 0fc9c473e4dcbfa18d139843fb3ebda2 200 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 23 33 - T 12-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 M634_22335 0fc9c473e4dcbfa18d139843fb3ebda2 200 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 25 183 2.5E-22 T 12-10-2018 IPR013830 SGNH hydrolase-type esterase domain M634_22335 0fc9c473e4dcbfa18d139843fb3ebda2 200 SUPERFAMILY SSF52266 22 199 4.58E-51 T 12-10-2018 M634_22335 0fc9c473e4dcbfa18d139843fb3ebda2 200 Gene3D G3DSA:3.40.50.1110 20 200 3.7E-64 T 12-10-2018 IPR036514 SGNH hydrolase superfamily M634_19960 918d24648d40492bef3f1eaa6dee3853 360 Gene3D G3DSA:2.40.420.20 38 350 1.2E-56 T 12-10-2018 M634_19960 918d24648d40492bef3f1eaa6dee3853 360 SUPERFAMILY SSF111369 50 222 1.31E-19 T 12-10-2018 M634_19960 918d24648d40492bef3f1eaa6dee3853 360 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 36 350 3.8E-54 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 M634_19960 918d24648d40492bef3f1eaa6dee3853 360 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 259 6.9E-15 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain M634_19960 918d24648d40492bef3f1eaa6dee3853 360 Gene3D G3DSA:2.40.50.100 60 206 1.2E-56 T 12-10-2018 M634_19960 918d24648d40492bef3f1eaa6dee3853 360 Gene3D G3DSA:1.10.287.470 94 167 1.2E-56 T 12-10-2018 M634_19960 918d24648d40492bef3f1eaa6dee3853 360 Gene3D G3DSA:2.40.30.170 45 281 1.2E-56 T 12-10-2018 M634_04720 0e9d1278d18251e4f9c7a9206755ddcc 110 Gene3D G3DSA:3.30.429.10 1 110 1.4E-44 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily M634_04720 0e9d1278d18251e4f9c7a9206755ddcc 110 SUPERFAMILY SSF55331 1 110 7.32E-38 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily M634_04720 0e9d1278d18251e4f9c7a9206755ddcc 110 Pfam PF08921 Domain of unknown function (DUF1904) 1 109 2.4E-38 T 12-10-2018 IPR015017 Protein of unknown function DUF1904 M634_02390 d868e2c4104b7fdf3457c06410874bc3 107 Pfam PF10625 Universal stress protein B (UspB) 1 106 1.8E-51 T 12-10-2018 IPR019598 Universal stress protein B M634_02390 d868e2c4104b7fdf3457c06410874bc3 107 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 39.364 T 12-10-2018 IPR019598 Universal stress protein B M634_00520 15eae480957df433a9e0e84f5c04e93e 326 PIRSF PIRSF005651 1 326 1.0E-95 T 12-10-2018 IPR010200 HflC GO:0016021|GO:0052547 M634_00520 15eae480957df433a9e0e84f5c04e93e 326 SMART SM00244 18 218 5.4E-49 T 12-10-2018 IPR001107 Band 7 domain M634_00520 15eae480957df433a9e0e84f5c04e93e 326 TIGRFAM TIGR01932 hflC: HflC protein 1 318 2.2E-136 T 12-10-2018 IPR010200 HflC GO:0016021|GO:0052547 M634_00520 15eae480957df433a9e0e84f5c04e93e 326 SUPERFAMILY SSF117892 56 223 2.88E-21 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily M634_00520 15eae480957df433a9e0e84f5c04e93e 326 Pfam PF01145 SPFH domain / Band 7 family 22 233 1.1E-29 T 12-10-2018 IPR001107 Band 7 domain M634_08920 f4287ea5b6729072ae1a1d7178f8db5e 326 Gene3D G3DSA:2.40.30.170 38 323 6.4E-31 T 12-10-2018 M634_08920 f4287ea5b6729072ae1a1d7178f8db5e 326 Gene3D G3DSA:1.10.287.470 78 207 6.4E-31 T 12-10-2018 M634_08920 f4287ea5b6729072ae1a1d7178f8db5e 326 SUPERFAMILY SSF111369 43 124 1.11E-8 T 12-10-2018 M634_08920 f4287ea5b6729072ae1a1d7178f8db5e 326 Gene3D G3DSA:2.40.50.100 44 242 6.4E-31 T 12-10-2018 M634_08920 f4287ea5b6729072ae1a1d7178f8db5e 326 Pfam PF13437 HlyD family secretion protein 208 312 4.7E-6 T 12-10-2018 M634_08920 f4287ea5b6729072ae1a1d7178f8db5e 326 Pfam PF13533 Biotin-lipoyl like 47 91 1.5E-12 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain M634_16015 ec02ed77d1d1594e50350b3031c6a3d1 159 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 29 9.9E-5 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M634_16015 ec02ed77d1d1594e50350b3031c6a3d1 159 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 30 3.8E-5 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M634_16015 ec02ed77d1d1594e50350b3031c6a3d1 159 SUPERFAMILY SSF54523 10 69 6.36E-7 T 12-10-2018 M634_16015 ec02ed77d1d1594e50350b3031c6a3d1 159 Gene3D G3DSA:3.30.700.10 10 159 1.3E-5 T 12-10-2018 M634_21160 2a115b0198b5d9f917b5282d5201cb48 311 Pfam PF01032 FecCD transport family 8 306 6.0E-64 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 M634_21160 2a115b0198b5d9f917b5282d5201cb48 311 Gene3D G3DSA:1.10.3470.10 1 311 1.7E-62 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M634_21160 2a115b0198b5d9f917b5282d5201cb48 311 SUPERFAMILY SSF81345 4 306 2.62E-63 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M634_15830 cc5c0fb71aa223afc63d92251587f5b9 84 PIRSF PIRSF003113 2 83 1.7E-22 T 12-10-2018 IPR002634 BolA protein M634_15830 cc5c0fb71aa223afc63d92251587f5b9 84 Pfam PF01722 BolA-like protein 18 74 9.4E-15 T 12-10-2018 IPR002634 BolA protein M634_15830 cc5c0fb71aa223afc63d92251587f5b9 84 Gene3D G3DSA:3.30.300.90 1 84 1.9E-33 T 12-10-2018 M634_15830 cc5c0fb71aa223afc63d92251587f5b9 84 SUPERFAMILY SSF82657 4 82 1.57E-28 T 12-10-2018 IPR036065 BolA-like superfamily M634_06840 1f0b8cc0aedb7bf7c4e0efe24837c777 116 Pfam PF01230 HIT domain 12 109 2.5E-29 T 12-10-2018 IPR001310 Histidine triad (HIT) protein M634_06840 1f0b8cc0aedb7bf7c4e0efe24837c777 116 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 12-10-2018 IPR019808 Histidine triad, conserved site M634_06840 1f0b8cc0aedb7bf7c4e0efe24837c777 116 PRINTS PR00332 Histidine triad family signature 6 22 2.2E-19 T 12-10-2018 IPR001310 Histidine triad (HIT) protein M634_06840 1f0b8cc0aedb7bf7c4e0efe24837c777 116 PRINTS PR00332 Histidine triad family signature 27 45 2.2E-19 T 12-10-2018 IPR001310 Histidine triad (HIT) protein M634_06840 1f0b8cc0aedb7bf7c4e0efe24837c777 116 PRINTS PR00332 Histidine triad family signature 95 105 2.2E-19 T 12-10-2018 IPR001310 Histidine triad (HIT) protein M634_06840 1f0b8cc0aedb7bf7c4e0efe24837c777 116 Gene3D G3DSA:3.30.428.10 1 111 8.9E-36 T 12-10-2018 IPR036265 HIT-like superfamily M634_06840 1f0b8cc0aedb7bf7c4e0efe24837c777 116 SUPERFAMILY SSF54197 2 112 3.56E-35 T 12-10-2018 IPR036265 HIT-like superfamily M634_17465 81ec02a340a9d0968e7b7c075fa582e0 422 Pfam PF08874 Domain of unknown function (DUF1835) 100 215 4.9E-11 T 12-10-2018 IPR014973 Protein of unknown function DUF1835 M634_18505 c597cd67a52aa4a84847c0f1a8c6bb7f 279 Gene3D G3DSA:3.40.50.1820 3 278 3.4E-95 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_18505 c597cd67a52aa4a84847c0f1a8c6bb7f 279 SUPERFAMILY SSF53474 3 277 1.89E-91 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_18505 c597cd67a52aa4a84847c0f1a8c6bb7f 279 Pfam PF00756 Putative esterase 23 271 5.9E-61 T 12-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 M634_18505 c597cd67a52aa4a84847c0f1a8c6bb7f 279 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 5 277 2.5E-124 T 12-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 M634_11645 e3e9e395140b3fc8f9790c531e7f4612 274 Pfam PF10065 Uncharacterized conserved protein (DUF2303) 24 273 9.0E-67 T 12-10-2018 IPR019276 Protein of unkown function DUF2303 M634_02990 ca08f3be0adab506d89576dd19e59a19 135 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 82 93 - T 12-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 M634_02990 ca08f3be0adab506d89576dd19e59a19 135 Pfam PF01219 Prokaryotic diacylglycerol kinase 28 129 2.7E-33 T 12-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 M634_02990 ca08f3be0adab506d89576dd19e59a19 135 Gene3D G3DSA:1.10.3830.10 15 133 5.2E-39 T 12-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 M634_20835 2510c5f892dd8daa47cae00b149dd069 200 Gene3D G3DSA:3.40.50.150 1 200 6.2E-43 T 12-10-2018 M634_20835 2510c5f892dd8daa47cae00b149dd069 200 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 10 178 3.7E-29 T 12-10-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 M634_20835 2510c5f892dd8daa47cae00b149dd069 200 SUPERFAMILY SSF53335 8 199 2.81E-43 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_01345 7dbd13d0cf427e2670a09038cb1c5e88 109 Pfam PF10694 Protein of unknown function (DUF2500) 2 105 1.2E-24 T 12-10-2018 IPR019635 Protein of unknown function DUF2500 M634_01345 7dbd13d0cf427e2670a09038cb1c5e88 109 Gene3D G3DSA:2.40.50.660 32 108 6.4E-7 T 12-10-2018 M634_03900 c8d0e8995ec145f6d5d56d9b14a841c8 321 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 35 236 2.3E-28 T 12-10-2018 IPR000477 Reverse transcriptase domain M634_03900 c8d0e8995ec145f6d5d56d9b14a841c8 321 SUPERFAMILY SSF56672 27 226 8.9E-13 T 12-10-2018 M634_03900 c8d0e8995ec145f6d5d56d9b14a841c8 321 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 44 56 4.4E-28 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M634_03900 c8d0e8995ec145f6d5d56d9b14a841c8 321 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 91 109 4.4E-28 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M634_03900 c8d0e8995ec145f6d5d56d9b14a841c8 321 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 75 89 4.4E-28 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M634_03900 c8d0e8995ec145f6d5d56d9b14a841c8 321 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 144 157 4.4E-28 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M634_03900 c8d0e8995ec145f6d5d56d9b14a841c8 321 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 232 238 4.4E-28 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M634_03900 c8d0e8995ec145f6d5d56d9b14a841c8 321 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 30 43 4.4E-28 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M634_03900 c8d0e8995ec145f6d5d56d9b14a841c8 321 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 177 188 4.4E-28 T 12-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 M634_17770 30bf3bf518a64066613ab14c45d95bb8 401 Gene3D G3DSA:1.20.1250.20 2 386 8.0E-40 T 12-10-2018 M634_17770 30bf3bf518a64066613ab14c45d95bb8 401 Pfam PF07690 Major Facilitator Superfamily 8 265 5.6E-20 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M634_17770 30bf3bf518a64066613ab14c45d95bb8 401 SUPERFAMILY SSF103473 5 386 1.57E-43 T 12-10-2018 IPR036259 MFS transporter superfamily M634_02560 d16719e913d949a70071cffc341d3f3f 180 Pfam PF04220 Der GTPase activator (YihI) 21 170 7.8E-46 T 12-10-2018 IPR007336 Der GTPase activator GO:0005096 M634_02560 d16719e913d949a70071cffc341d3f3f 180 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 173 16.644 T 12-10-2018 IPR007336 Der GTPase activator GO:0005096 M634_06510 5f3d7b7ed86823b541c860e07128bc12 414 Gene3D G3DSA:3.50.50.60 2 413 1.5E-125 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_06510 5f3d7b7ed86823b541c860e07128bc12 414 SUPERFAMILY SSF51905 4 389 2.28E-45 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_06510 5f3d7b7ed86823b541c860e07128bc12 414 Pfam PF01494 FAD binding domain 7 164 1.1E-15 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 M634_09900 b38e9c025c49678d74f0b98f3e663677 139 Pfam PF00293 NUDIX domain 6 127 2.4E-16 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 M634_09900 b38e9c025c49678d74f0b98f3e663677 139 PRINTS PR00502 NUDIX hydrolase family signature 31 45 3.0E-5 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 M634_09900 b38e9c025c49678d74f0b98f3e663677 139 PRINTS PR00502 NUDIX hydrolase family signature 45 60 3.0E-5 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 M634_09900 b38e9c025c49678d74f0b98f3e663677 139 Gene3D G3DSA:3.90.79.10 3 138 3.8E-21 T 12-10-2018 M634_09900 b38e9c025c49678d74f0b98f3e663677 139 SUPERFAMILY SSF55811 6 137 3.93E-22 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 M634_14275 55837dbaff7b94043a2b7dae6051ace9 607 PIRSF PIRSF004950 1 606 7.5E-234 T 12-10-2018 IPR012159 Inner membrane protein YejM M634_14275 55837dbaff7b94043a2b7dae6051ace9 607 Gene3D G3DSA:3.40.720.10 238 528 2.7E-52 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 M634_14275 55837dbaff7b94043a2b7dae6051ace9 607 SUPERFAMILY SSF53649 247 571 3.93E-60 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 M634_14275 55837dbaff7b94043a2b7dae6051ace9 607 Pfam PF11893 Domain of unknown function (DUF3413) 3 242 2.1E-50 T 12-10-2018 IPR024588 Inner membrane protein YejM, N-terminal M634_14275 55837dbaff7b94043a2b7dae6051ace9 607 Pfam PF00884 Sulfatase 250 521 1.5E-32 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 M634_19265 41e8b0e5490b01c3e30a677893bf8862 104 SUPERFAMILY SSF54909 3 79 9.12E-12 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel M634_24220 d1d7f1d0650835c2b24641bd6f6ea42c 97 Pfam PF12840 Helix-turn-helix domain 8 69 1.3E-11 T 12-10-2018 M634_24220 d1d7f1d0650835c2b24641bd6f6ea42c 97 SMART SM00418 8 88 1.1E-5 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M634_24220 d1d7f1d0650835c2b24641bd6f6ea42c 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 1.7E-6 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M634_24220 d1d7f1d0650835c2b24641bd6f6ea42c 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 1.7E-6 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M634_24220 d1d7f1d0650835c2b24641bd6f6ea42c 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 1.7E-6 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 M634_24220 d1d7f1d0650835c2b24641bd6f6ea42c 97 Gene3D G3DSA:1.10.10.10 1 97 5.0E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_24220 d1d7f1d0650835c2b24641bd6f6ea42c 97 SUPERFAMILY SSF46785 1 93 6.17E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_23130 8e98ed34523e0ad52a250847fa3b1cdf 151 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 14 144 8.6E-41 T 12-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN M634_23130 8e98ed34523e0ad52a250847fa3b1cdf 151 Gene3D G3DSA:2.60.40.4150 26 151 8.9E-40 T 12-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily M634_23130 8e98ed34523e0ad52a250847fa3b1cdf 151 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 8 146 5.9E-51 T 12-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN M634_05875 5205aeb81f32ee592b36e66e7574a29e 275 SUPERFAMILY SSF53335 76 269 2.55E-50 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_05875 5205aeb81f32ee592b36e66e7574a29e 275 Gene3D G3DSA:3.40.50.150 75 274 1.8E-60 T 12-10-2018 M634_05875 5205aeb81f32ee592b36e66e7574a29e 275 Gene3D G3DSA:1.10.155.10 1 74 1.3E-10 T 12-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily M634_05875 5205aeb81f32ee592b36e66e7574a29e 275 SMART SM00138 8 272 4.7E-132 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 M634_05875 5205aeb81f32ee592b36e66e7574a29e 275 Pfam PF03705 CheR methyltransferase, all-alpha domain 9 55 7.1E-10 T 12-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal M634_05875 5205aeb81f32ee592b36e66e7574a29e 275 Pfam PF01739 CheR methyltransferase, SAM binding domain 76 269 9.9E-69 T 12-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal M634_05875 5205aeb81f32ee592b36e66e7574a29e 275 PRINTS PR00996 Glutamate methyltransferase family signature 143 159 1.3E-43 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 M634_05875 5205aeb81f32ee592b36e66e7574a29e 275 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 1.3E-43 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 M634_05875 5205aeb81f32ee592b36e66e7574a29e 275 PRINTS PR00996 Glutamate methyltransferase family signature 231 254 1.3E-43 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 M634_05875 5205aeb81f32ee592b36e66e7574a29e 275 PRINTS PR00996 Glutamate methyltransferase family signature 212 226 1.3E-43 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 M634_05875 5205aeb81f32ee592b36e66e7574a29e 275 PRINTS PR00996 Glutamate methyltransferase family signature 69 81 1.3E-43 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 M634_05875 5205aeb81f32ee592b36e66e7574a29e 275 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 1.3E-43 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 M634_05875 5205aeb81f32ee592b36e66e7574a29e 275 SUPERFAMILY SSF47757 3 75 2.48E-14 T 12-10-2018 M634_09950 8831a6f65e0d5a520b1274adf1fc4a6f 336 Pfam PF11279 Protein of unknown function (DUF3080) 26 328 2.2E-94 T 12-10-2018 IPR021431 Protein of unknown function DUF3080 M634_02645 b3035c1dd8d90a33ff051778a2360f95 542 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 266 281 - T 12-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 M634_02645 b3035c1dd8d90a33ff051778a2360f95 542 Pfam PF01293 Phosphoenolpyruvate carboxykinase 24 491 2.8E-211 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 M634_02645 b3035c1dd8d90a33ff051778a2360f95 542 SUPERFAMILY SSF68923 11 228 2.62E-88 T 12-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 M634_02645 b3035c1dd8d90a33ff051778a2360f95 542 Gene3D G3DSA:3.40.449.10 25 235 4.6E-237 T 12-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 M634_02645 b3035c1dd8d90a33ff051778a2360f95 542 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 11 541 1.1E-278 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 M634_02645 b3035c1dd8d90a33ff051778a2360f95 542 Gene3D G3DSA:3.90.228.20 236 526 4.6E-237 T 12-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 M634_02645 b3035c1dd8d90a33ff051778a2360f95 542 Gene3D G3DSA:2.170.8.10 49 351 4.6E-237 T 12-10-2018 M634_02645 b3035c1dd8d90a33ff051778a2360f95 542 PIRSF PIRSF006294 4 541 1.9E-227 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 M634_02645 b3035c1dd8d90a33ff051778a2360f95 542 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 18 539 55.124 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 M634_02645 b3035c1dd8d90a33ff051778a2360f95 542 SUPERFAMILY SSF53795 230 541 1.96E-128 T 12-10-2018 M634_02045 7fb338c03342b8b0a00ea32803f4f47f 194 Pfam PF11355 Protein of unknown function (DUF3157) 2 193 4.0E-77 T 12-10-2018 IPR021501 Protein of unknown function DUF3157 M634_04635 54b7d082cb25a2c3839659c645c15b47 648 Gene3D G3DSA:1.10.530.10 477 648 5.3E-49 T 12-10-2018 M634_04635 54b7d082cb25a2c3839659c645c15b47 648 Pfam PF01464 Transglycosylase SLT domain 489 600 1.9E-28 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 M634_04635 54b7d082cb25a2c3839659c645c15b47 648 Gene3D G3DSA:1.10.1240.20 410 476 6.9E-21 T 12-10-2018 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily GO:0004553|GO:0042597 M634_04635 54b7d082cb25a2c3839659c645c15b47 648 SUPERFAMILY SSF48435 33 481 3.66E-128 T 12-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 M634_04635 54b7d082cb25a2c3839659c645c15b47 648 SUPERFAMILY SSF53955 484 643 1.99E-47 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily M634_04635 54b7d082cb25a2c3839659c645c15b47 648 Gene3D G3DSA:1.25.20.10 33 394 2.0E-101 T 12-10-2018 M634_04635 54b7d082cb25a2c3839659c645c15b47 648 Pfam PF14718 Soluble lytic murein transglycosylase L domain 411 476 1.6E-24 T 12-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 M634_23965 fabccb2f627cb40db9b20f702b7e5f0c 454 Pfam PF07670 Nucleoside recognition 140 233 1.8E-7 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 M634_22780 4b8d79791254a3183cda154bc7bcfe4f 131 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 8 101 2.0E-49 T 12-10-2018 IPR020483 Uncharacterised protein family YgbA M634_22780 4b8d79791254a3183cda154bc7bcfe4f 131 Pfam PF11756 Nitrous oxide-stimulated promoter 8 111 8.1E-47 T 12-10-2018 IPR020483 Uncharacterised protein family YgbA M634_19685 bcb2848735401b61775261ca1f8e2ffc 118 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 112 3.3E-8 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain M634_19685 bcb2848735401b61775261ca1f8e2ffc 118 SUPERFAMILY SSF54593 6 115 3.03E-21 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M634_19685 bcb2848735401b61775261ca1f8e2ffc 118 Gene3D G3DSA:3.10.180.10 1 117 1.1E-18 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M634_21555 d12605e869b7ddac70ff3f45d6009c40 447 Pfam PF13629 Pilus formation protein N terminal region 26 94 1.9E-16 T 12-10-2018 IPR032789 Pilus formation protein, N-terminal M634_21555 d12605e869b7ddac70ff3f45d6009c40 447 PRINTS PR00811 Bacterial general secretion pathway protein D signature 189 199 3.8E-6 T 12-10-2018 IPR001775 GspD/PilQ family M634_21555 d12605e869b7ddac70ff3f45d6009c40 447 PRINTS PR00811 Bacterial general secretion pathway protein D signature 367 385 3.8E-6 T 12-10-2018 IPR001775 GspD/PilQ family M634_21555 d12605e869b7ddac70ff3f45d6009c40 447 Pfam PF00263 Bacterial type II and III secretion system protein 247 402 2.0E-42 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 M634_18420 83230ae89e3934682629beb4227cb6b4 341 Pfam PF01757 Acyltransferase family 8 326 3.2E-23 T 12-10-2018 IPR002656 Acyltransferase 3 GO:0016747 M634_21535 f2226906d68365424c34179588240f61 302 SUPERFAMILY SSF53850 96 242 1.09E-5 T 12-10-2018 M634_21535 f2226906d68365424c34179588240f61 302 SUPERFAMILY SSF46785 4 114 4.71E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_21535 f2226906d68365424c34179588240f61 302 Gene3D G3DSA:1.10.10.10 4 89 1.8E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_21535 f2226906d68365424c34179588240f61 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 68 1.2E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_21535 f2226906d68365424c34179588240f61 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 1.0E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_21535 f2226906d68365424c34179588240f61 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 1.0E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_21535 f2226906d68365424c34179588240f61 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 1.0E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_08570 dbf5720b8f5254f7f6ddc0d4ecffa0a2 357 Gene3D G3DSA:3.40.190.10 30 335 2.4E-119 T 12-10-2018 M634_08570 dbf5720b8f5254f7f6ddc0d4ecffa0a2 357 Pfam PF13416 Bacterial extracellular solute-binding protein 46 318 6.8E-36 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein M634_08570 dbf5720b8f5254f7f6ddc0d4ecffa0a2 357 SUPERFAMILY SSF53850 25 355 4.8E-60 T 12-10-2018 M634_08570 dbf5720b8f5254f7f6ddc0d4ecffa0a2 357 Gene3D G3DSA:3.40.190.10 137 341 2.4E-119 T 12-10-2018 M634_07020 bf8ecca6cd0f80976c6fa9b9f5b2f656 54 Pfam PF10689 Protein of unknown function (DUF2496) 8 50 1.7E-23 T 12-10-2018 IPR019630 Protein of unknown function DUF2496, YbaM-related M634_20320 01a173b5f77a8c7d662fb96e1e15bde1 218 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 14 210 2.3E-75 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 M634_20320 01a173b5f77a8c7d662fb96e1e15bde1 218 Gene3D G3DSA:3.90.870.10 6 218 2.1E-87 T 12-10-2018 M634_20320 01a173b5f77a8c7d662fb96e1e15bde1 218 SUPERFAMILY SSF55821 10 213 5.04E-81 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily M634_20320 01a173b5f77a8c7d662fb96e1e15bde1 218 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 12 214 42.126 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 M634_20320 01a173b5f77a8c7d662fb96e1e15bde1 218 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 18 209 5.5E-78 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 M634_04390 a1a792c641e0afd3a0884054ee2d94ea 189 Gene3D G3DSA:1.20.120.520 4 159 2.9E-17 T 12-10-2018 M634_04390 a1a792c641e0afd3a0884054ee2d94ea 189 Pfam PF01814 Hemerythrin HHE cation binding domain 8 141 1.7E-15 T 12-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 M634_13620 3db5fbef805194d8953879f8781981ff 643 Gene3D G3DSA:3.30.750.140 492 605 2.0E-31 T 12-10-2018 IPR038610 FliK-like, C-terminal domain superfamily M634_13620 3db5fbef805194d8953879f8781981ff 643 Pfam PF02120 Flagellar hook-length control protein FliK 513 596 7.4E-25 T 12-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal M634_13920 db36fb53eae6cd0d96a88b1e4da6f3d2 379 SUPERFAMILY SSF53756 6 379 1.12E-27 T 12-10-2018 M634_13920 db36fb53eae6cd0d96a88b1e4da6f3d2 379 Pfam PF02684 Lipid-A-disaccharide synthetase 7 372 2.5E-131 T 12-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 M634_13920 db36fb53eae6cd0d96a88b1e4da6f3d2 379 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 3 376 3.1E-145 T 12-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 M634_13920 db36fb53eae6cd0d96a88b1e4da6f3d2 379 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 4 378 41.983 T 12-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 M634_23335 44ac30e2a82271ee6aca78323ea7b655 277 Gene3D G3DSA:1.10.10.10 1 91 2.6E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_23335 44ac30e2a82271ee6aca78323ea7b655 277 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.7E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_23335 44ac30e2a82271ee6aca78323ea7b655 277 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.7E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_23335 44ac30e2a82271ee6aca78323ea7b655 277 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.7E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_23335 44ac30e2a82271ee6aca78323ea7b655 277 SUPERFAMILY SSF53850 88 255 3.72E-22 T 12-10-2018 M634_23335 44ac30e2a82271ee6aca78323ea7b655 277 Gene3D G3DSA:3.40.190.10 93 254 6.2E-42 T 12-10-2018 M634_23335 44ac30e2a82271ee6aca78323ea7b655 277 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 7.1E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_23335 44ac30e2a82271ee6aca78323ea7b655 277 Pfam PF03466 LysR substrate binding domain 88 255 2.4E-21 T 12-10-2018 IPR005119 LysR, substrate-binding M634_23335 44ac30e2a82271ee6aca78323ea7b655 277 Gene3D G3DSA:3.40.190.10 159 249 6.2E-42 T 12-10-2018 M634_23335 44ac30e2a82271ee6aca78323ea7b655 277 SUPERFAMILY SSF46785 1 87 8.16E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_21860 968e6154a108d9a994eb5d6b842e2801 109 Pfam PF07119 Protein of unknown function (DUF1375) 15 85 1.6E-14 T 12-10-2018 IPR010780 Protein of unknown function DUF1375 M634_13485 5c61fe3e6a6be3d8b1e44214dca3a1c6 184 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 176 6.5E-71 T 12-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 M634_13485 5c61fe3e6a6be3d8b1e44214dca3a1c6 184 Gene3D G3DSA:3.40.30.10 20 184 3.1E-44 T 12-10-2018 M634_13485 5c61fe3e6a6be3d8b1e44214dca3a1c6 184 ProSitePatterns PS00194 Thioredoxin family active site. 71 89 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 M634_13485 5c61fe3e6a6be3d8b1e44214dca3a1c6 184 SUPERFAMILY SSF52833 46 178 2.78E-38 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M634_13485 5c61fe3e6a6be3d8b1e44214dca3a1c6 184 Pfam PF08534 Redoxin 41 164 4.1E-27 T 12-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 M634_03390 e8b2fa34d117e41896678b4dde01c2be 118 Gene3D G3DSA:4.10.910.10 72 118 1.3E-26 T 12-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03390 e8b2fa34d117e41896678b4dde01c2be 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.7E-53 T 12-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_03390 e8b2fa34d117e41896678b4dde01c2be 118 SUPERFAMILY SSF46946 2 114 4.42E-45 T 12-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 M634_03390 e8b2fa34d117e41896678b4dde01c2be 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 3.4E-32 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03390 e8b2fa34d117e41896678b4dde01c2be 118 PIRSF PIRSF002134 1 118 4.1E-41 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03390 e8b2fa34d117e41896678b4dde01c2be 118 Gene3D G3DSA:1.10.8.50 1 71 5.4E-28 T 12-10-2018 M634_03390 e8b2fa34d117e41896678b4dde01c2be 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 12-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_03390 e8b2fa34d117e41896678b4dde01c2be 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 27.075 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 M634_09140 8023b5b64fab7f68f7c76908c3758e1a 123 Pfam PF05932 Tir chaperone protein (CesT) family 9 117 1.6E-6 T 12-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 M634_09140 8023b5b64fab7f68f7c76908c3758e1a 123 Gene3D G3DSA:3.30.1460.10 1 123 5.4E-47 T 12-10-2018 M634_09140 8023b5b64fab7f68f7c76908c3758e1a 123 TIGRFAM TIGR02503 type_III_SycN: type III secretion chaperone SycN 4 122 1.6E-46 T 12-10-2018 IPR012673 Type III secretion system chaperone SycN GO:0009306 M634_09140 8023b5b64fab7f68f7c76908c3758e1a 123 SUPERFAMILY SSF69635 2 121 2.08E-45 T 12-10-2018 M634_00180 0434b8f5a05bcdaa7fd0ca134c8e4546 129 Gene3D G3DSA:3.30.70.60 1 92 4.2E-33 T 12-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 M634_00180 0434b8f5a05bcdaa7fd0ca134c8e4546 129 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 12-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 M634_00180 0434b8f5a05bcdaa7fd0ca134c8e4546 129 SUPERFAMILY SSF54995 1 103 2.09E-38 T 12-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_00180 0434b8f5a05bcdaa7fd0ca134c8e4546 129 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 22.163 T 12-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 M634_00180 0434b8f5a05bcdaa7fd0ca134c8e4546 129 Pfam PF01250 Ribosomal protein S6 3 91 1.4E-28 T 12-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_00180 0434b8f5a05bcdaa7fd0ca134c8e4546 129 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 7.9E-39 T 12-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_24355 dc9cb6221ac103bfc20995381795689f 345 SUPERFAMILY SSF81345 5 339 3.66E-84 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M634_24355 dc9cb6221ac103bfc20995381795689f 345 Gene3D G3DSA:1.10.3470.10 5 344 7.6E-105 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M634_24355 dc9cb6221ac103bfc20995381795689f 345 Pfam PF01032 FecCD transport family 19 338 9.9E-92 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 M634_19755 ae669867d31727f30f7ee65000d19654 174 Gene3D G3DSA:2.40.128.640 66 174 1.4E-42 T 12-10-2018 M634_19755 ae669867d31727f30f7ee65000d19654 174 Pfam PF04170 NlpE N-terminal domain 79 163 1.5E-32 T 12-10-2018 IPR007298 Copper resistance lipoprotein NlpE M634_01330 491c42c8ce65c657fed9e36f5daf27c0 206 Pfam PF07947 YhhN family 26 204 3.0E-32 T 12-10-2018 IPR012506 YhhN-like GO:0016021 M634_24340 ce80840cd7b30e43f315eb35851b9112 232 Pfam PF01618 MotA/TolQ/ExbB proton channel family 95 194 3.3E-22 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel M634_06665 48aefd042fd0cf276d3551f7e685df01 288 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 18 287 56.471 T 12-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 M634_06665 48aefd042fd0cf276d3551f7e685df01 288 Gene3D G3DSA:1.10.12.10 226 276 5.4E-31 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal M634_06665 48aefd042fd0cf276d3551f7e685df01 288 Pfam PF00378 Enoyl-CoA hydratase/isomerase 34 282 3.7E-78 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 M634_06665 48aefd042fd0cf276d3551f7e685df01 288 TIGRFAM TIGR01929 menB: naphthoate synthase 25 284 6.2E-145 T 12-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 M634_06665 48aefd042fd0cf276d3551f7e685df01 288 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 126 146 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 M634_06665 48aefd042fd0cf276d3551f7e685df01 288 Gene3D G3DSA:3.90.226.10 3 225 3.4E-84 T 12-10-2018 M634_06665 48aefd042fd0cf276d3551f7e685df01 288 SUPERFAMILY SSF52096 22 284 2.28E-78 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily M634_22045 fcf65056c549e557049968f585817f5e 317 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 44 306 9.1E-10 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase M634_22045 fcf65056c549e557049968f585817f5e 317 SUPERFAMILY SSF56219 5 314 1.83E-31 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily M634_22045 fcf65056c549e557049968f585817f5e 317 Gene3D G3DSA:3.60.10.10 2 310 2.4E-33 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily M634_12900 beded363512931529777b905dc94eef2 75 Gene3D G3DSA:1.10.3390.10 1 75 2.3E-32 T 12-10-2018 IPR023202 YejL-like superfamily M634_12900 beded363512931529777b905dc94eef2 75 PIRSF PIRSF006188 1 72 9.2E-37 T 12-10-2018 IPR009857 Uncharacterised protein family UPF0352 M634_12900 beded363512931529777b905dc94eef2 75 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 7.0E-33 T 12-10-2018 IPR009857 Uncharacterised protein family UPF0352 M634_12900 beded363512931529777b905dc94eef2 75 SUPERFAMILY SSF158651 1 75 7.59E-29 T 12-10-2018 IPR023202 YejL-like superfamily M634_12900 beded363512931529777b905dc94eef2 75 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 6.5E-19 T 12-10-2018 IPR009857 Uncharacterised protein family UPF0352 M634_12900 beded363512931529777b905dc94eef2 75 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 23.22 T 12-10-2018 IPR009857 Uncharacterised protein family UPF0352 M634_23855 e3bde7ebcd3456d8a60c01e604f19ba0 545 PRINTS PR01165 Cytochrome c oxidase subunit I signature 313 328 4.5E-122 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23855 e3bde7ebcd3456d8a60c01e604f19ba0 545 PRINTS PR01165 Cytochrome c oxidase subunit I signature 187 205 4.5E-122 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23855 e3bde7ebcd3456d8a60c01e604f19ba0 545 PRINTS PR01165 Cytochrome c oxidase subunit I signature 114 138 4.5E-122 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23855 e3bde7ebcd3456d8a60c01e604f19ba0 545 PRINTS PR01165 Cytochrome c oxidase subunit I signature 216 235 4.5E-122 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23855 e3bde7ebcd3456d8a60c01e604f19ba0 545 PRINTS PR01165 Cytochrome c oxidase subunit I signature 267 288 4.5E-122 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23855 e3bde7ebcd3456d8a60c01e604f19ba0 545 PRINTS PR01165 Cytochrome c oxidase subunit I signature 157 169 4.5E-122 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23855 e3bde7ebcd3456d8a60c01e604f19ba0 545 PRINTS PR01165 Cytochrome c oxidase subunit I signature 372 390 4.5E-122 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23855 e3bde7ebcd3456d8a60c01e604f19ba0 545 PRINTS PR01165 Cytochrome c oxidase subunit I signature 400 419 4.5E-122 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23855 e3bde7ebcd3456d8a60c01e604f19ba0 545 PRINTS PR01165 Cytochrome c oxidase subunit I signature 450 471 4.5E-122 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23855 e3bde7ebcd3456d8a60c01e604f19ba0 545 PRINTS PR01165 Cytochrome c oxidase subunit I signature 337 358 4.5E-122 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23855 e3bde7ebcd3456d8a60c01e604f19ba0 545 PRINTS PR01165 Cytochrome c oxidase subunit I signature 40 65 4.5E-122 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23855 e3bde7ebcd3456d8a60c01e604f19ba0 545 PRINTS PR01165 Cytochrome c oxidase subunit I signature 87 110 4.5E-122 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23855 e3bde7ebcd3456d8a60c01e604f19ba0 545 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 49 491 1.3E-150 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23855 e3bde7ebcd3456d8a60c01e604f19ba0 545 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 41 544 1.4E-213 T 12-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 M634_23855 e3bde7ebcd3456d8a60c01e604f19ba0 545 SUPERFAMILY SSF81442 37 544 4.58E-193 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23855 e3bde7ebcd3456d8a60c01e604f19ba0 545 Gene3D G3DSA:1.20.210.10 27 545 4.4E-220 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23855 e3bde7ebcd3456d8a60c01e604f19ba0 545 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 269 323 - T 12-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_09295 ce7b6e7cc56f37757d58b0e4b7b36f0b 436 Gene3D G3DSA:1.20.1600.10 22 427 2.0E-82 T 12-10-2018 M634_09295 ce7b6e7cc56f37757d58b0e4b7b36f0b 436 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 22 430 1.5E-120 T 12-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 M634_09295 ce7b6e7cc56f37757d58b0e4b7b36f0b 436 Pfam PF02321 Outer membrane efflux protein 24 212 3.7E-27 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 M634_09295 ce7b6e7cc56f37757d58b0e4b7b36f0b 436 Pfam PF02321 Outer membrane efflux protein 233 416 1.7E-30 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 M634_09295 ce7b6e7cc56f37757d58b0e4b7b36f0b 436 SUPERFAMILY SSF56954 23 430 5.36E-88 T 12-10-2018 M634_21475 c41a0de8c39156fe4887a95d0102f4ef 307 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 13 302 4.6E-63 T 12-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 M634_21475 c41a0de8c39156fe4887a95d0102f4ef 307 SUPERFAMILY SSF51735 1 303 1.38E-75 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_21475 c41a0de8c39156fe4887a95d0102f4ef 307 Gene3D G3DSA:3.30.1780.10 4 302 5.2E-75 T 12-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 M634_21475 c41a0de8c39156fe4887a95d0102f4ef 307 PIRSF PIRSF001439 1 307 2.8E-75 T 12-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 M634_21475 c41a0de8c39156fe4887a95d0102f4ef 307 Gene3D G3DSA:3.40.50.720 122 283 5.2E-75 T 12-10-2018 M634_13615 def32e1f79e59eb3748f88296a497652 167 Pfam PF03748 Flagellar basal body-associated protein FliL 66 167 2.6E-19 T 12-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 M634_24565 5f28adb482caf81876712fb481544afc 107 Pfam PF00699 Urease beta subunit 3 101 1.3E-43 T 12-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 M634_24565 5f28adb482caf81876712fb481544afc 107 SUPERFAMILY SSF51278 1 105 4.45E-46 T 12-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 M634_24565 5f28adb482caf81876712fb481544afc 107 Hamap MF_01954 Urease subunit beta [ureB]. 1 103 31.197 T 12-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 M634_24565 5f28adb482caf81876712fb481544afc 107 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 104 3.3E-43 T 12-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 M634_24565 5f28adb482caf81876712fb481544afc 107 Gene3D G3DSA:2.10.150.10 1 107 5.3E-46 T 12-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 M634_08855 0fafd3bbe1bb4a3d066a300c1f5836b1 626 Pfam PF03445 Putative nucleotidyltransferase DUF294 304 441 1.0E-48 T 12-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 M634_08855 0fafd3bbe1bb4a3d066a300c1f5836b1 626 SMART SM00100 17 134 3.0E-9 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain M634_08855 0fafd3bbe1bb4a3d066a300c1f5836b1 626 SUPERFAMILY SSF51206 7 135 3.4E-27 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like M634_08855 0fafd3bbe1bb4a3d066a300c1f5836b1 626 Gene3D G3DSA:2.60.120.10 1 141 3.1E-22 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M634_08855 0fafd3bbe1bb4a3d066a300c1f5836b1 626 SUPERFAMILY SSF54631 146 278 1.52E-29 T 12-10-2018 M634_08855 0fafd3bbe1bb4a3d066a300c1f5836b1 626 Pfam PF00571 CBS domain 225 277 4.2E-11 T 12-10-2018 IPR000644 CBS domain M634_08855 0fafd3bbe1bb4a3d066a300c1f5836b1 626 Pfam PF00571 CBS domain 153 211 4.1E-9 T 12-10-2018 IPR000644 CBS domain M634_08855 0fafd3bbe1bb4a3d066a300c1f5836b1 626 Gene3D G3DSA:3.10.580.10 144 281 1.5E-34 T 12-10-2018 M634_08855 0fafd3bbe1bb4a3d066a300c1f5836b1 626 SMART SM00116 232 279 1.6E-4 T 12-10-2018 IPR000644 CBS domain M634_08855 0fafd3bbe1bb4a3d066a300c1f5836b1 626 SMART SM00116 159 215 0.003 T 12-10-2018 IPR000644 CBS domain M634_08855 0fafd3bbe1bb4a3d066a300c1f5836b1 626 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 478 621 2.6E-44 T 12-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding M634_08855 0fafd3bbe1bb4a3d066a300c1f5836b1 626 Pfam PF00027 Cyclic nucleotide-binding domain 37 118 4.2E-12 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain M634_24575 cb3a82b1a9e60dd17aaeb21825ac4458 280 Pfam PF01774 UreD urease accessory protein 53 252 8.1E-42 T 12-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 M634_24575 cb3a82b1a9e60dd17aaeb21825ac4458 280 Hamap MF_01384 Urease accessory protein UreD [ureD]. 11 264 25.682 T 12-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 M634_04825 378b6d36b73ceb8447db98df6921f363 158 SUPERFAMILY SSF54631 7 138 1.23E-31 T 12-10-2018 M634_04825 378b6d36b73ceb8447db98df6921f363 158 SMART SM00116 17 65 7.4E-9 T 12-10-2018 IPR000644 CBS domain M634_04825 378b6d36b73ceb8447db98df6921f363 158 SMART SM00116 90 137 1.3E-5 T 12-10-2018 IPR000644 CBS domain M634_04825 378b6d36b73ceb8447db98df6921f363 158 Pfam PF00571 CBS domain 85 133 3.5E-8 T 12-10-2018 IPR000644 CBS domain M634_04825 378b6d36b73ceb8447db98df6921f363 158 Pfam PF00571 CBS domain 10 64 2.5E-12 T 12-10-2018 IPR000644 CBS domain M634_04825 378b6d36b73ceb8447db98df6921f363 158 Gene3D G3DSA:3.10.580.10 5 158 5.2E-49 T 12-10-2018 M634_23825 71024b211d0b0e8629b029eb7860cdee 339 Pfam PF02628 Cytochrome oxidase assembly protein 6 315 4.8E-81 T 12-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 M634_06845 341729b0e9ddcd3e3a407e1fe1d66ed2 465 SUPERFAMILY SSF48452 67 259 9.28E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_14405 0ba1056d2493ab1ec9f9a3bb77c89139 477 PIRSF PIRSF006060 1 476 1.9E-52 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 M634_14405 0ba1056d2493ab1ec9f9a3bb77c89139 477 Gene3D G3DSA:1.20.1740.10 7 472 2.2E-9 T 12-10-2018 M634_14405 0ba1056d2493ab1ec9f9a3bb77c89139 477 Pfam PF13520 Amino acid permease 11 443 1.6E-30 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 M634_15695 2cb55ab4bbded94cf21b7321df0c8ee3 447 PIRSF PIRSF006351 7 438 7.2E-146 T 12-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 M634_15695 2cb55ab4bbded94cf21b7321df0c8ee3 447 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 19 427 2.3E-112 T 12-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 M634_15695 2cb55ab4bbded94cf21b7321df0c8ee3 447 Pfam PF02378 Phosphotransferase system, EIIC 35 354 3.7E-64 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 M634_16730 23b75d1fe62dbe284804f99444e87830 308 Pfam PF01882 Protein of unknown function DUF58 54 138 5.0E-19 T 12-10-2018 IPR002881 Domain of unknown function DUF58 M634_16855 17219cdea0ccda59d3f195f97ff9c391 527 SUPERFAMILY SSF55073 374 524 2.28E-36 T 12-10-2018 IPR029787 Nucleotide cyclase M634_16855 17219cdea0ccda59d3f195f97ff9c391 527 Gene3D G3DSA:1.25.40.10 21 347 9.7E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_16855 17219cdea0ccda59d3f195f97ff9c391 527 SMART SM00267 358 526 1.4E-30 T 12-10-2018 IPR000160 GGDEF domain M634_16855 17219cdea0ccda59d3f195f97ff9c391 527 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 366 524 5.2E-34 T 12-10-2018 IPR000160 GGDEF domain M634_16855 17219cdea0ccda59d3f195f97ff9c391 527 SUPERFAMILY SSF48452 41 222 1.33E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_16855 17219cdea0ccda59d3f195f97ff9c391 527 Gene3D G3DSA:3.30.70.270 355 526 1.8E-43 T 12-10-2018 M634_16855 17219cdea0ccda59d3f195f97ff9c391 527 Pfam PF00990 Diguanylate cyclase, GGDEF domain 370 522 7.0E-33 T 12-10-2018 IPR000160 GGDEF domain M634_10195 dff16230c0307d404f6690eb21698542 396 SUPERFAMILY SSF56796 26 392 3.27E-109 T 12-10-2018 M634_10195 dff16230c0307d404f6690eb21698542 396 Pfam PF00465 Iron-containing alcohol dehydrogenase 27 385 1.1E-107 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 M634_10195 dff16230c0307d404f6690eb21698542 396 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 276 296 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 M634_10195 dff16230c0307d404f6690eb21698542 396 Gene3D G3DSA:3.40.50.1970 14 200 7.2E-52 T 12-10-2018 M634_10195 dff16230c0307d404f6690eb21698542 396 Gene3D G3DSA:1.20.1090.10 201 393 2.3E-54 T 12-10-2018 M634_12730 e288927910891d0203033d57f6e27cc8 230 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 200 2.8E-65 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 M634_12730 e288927910891d0203033d57f6e27cc8 230 PIRSF PIRSF006102 1 220 1.9E-78 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 M634_12730 e288927910891d0203033d57f6e27cc8 230 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 6 208 7.7E-89 T 12-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 M634_12730 e288927910891d0203033d57f6e27cc8 230 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 210 28.166 T 12-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 M634_06925 deb566ecd963a7333bfd99fb8d464f28 335 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 324 40.018 T 12-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 M634_06925 deb566ecd963a7333bfd99fb8d464f28 335 SUPERFAMILY SSF52540 50 163 1.15E-11 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_06925 deb566ecd963a7333bfd99fb8d464f28 335 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 23 325 1.3E-94 T 12-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 M634_06925 deb566ecd963a7333bfd99fb8d464f28 335 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 18 323 3.9E-111 T 12-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 M634_21580 702893b2247b30d748f7cf7d6ff69e87 288 Pfam PF00482 Type II secretion system (T2SS), protein F 152 278 4.0E-16 T 12-10-2018 IPR018076 Type II secretion system F domain M634_03510 682deef7517050039f3288863cbfbf95 183 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 182 2.3E-87 T 12-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ M634_03510 682deef7517050039f3288863cbfbf95 183 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 24 181 2.4E-75 T 12-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ M634_18825 d948345976e7c1e1fbe81994ddc50dc7 236 SUPERFAMILY SSF51695 3 235 1.41E-64 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 M634_18825 d948345976e7c1e1fbe81994ddc50dc7 236 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 8 232 1.5E-36 T 12-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 M634_18825 d948345976e7c1e1fbe81994ddc50dc7 236 Gene3D G3DSA:3.20.20.190 1 236 2.0E-67 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 M634_20540 543449dd2def3ee20cd097eb15435df1 591 SUPERFAMILY SSF53474 225 527 1.58E-34 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_20540 543449dd2def3ee20cd097eb15435df1 591 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 55 584 5.1E-250 T 12-10-2018 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 M634_20540 543449dd2def3ee20cd097eb15435df1 591 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 95 266 9.6E-74 T 12-10-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 M634_20540 543449dd2def3ee20cd097eb15435df1 591 Gene3D G3DSA:3.40.50.1820 229 515 6.0E-9 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_06610 84db6800118b3f1188e01ec53ac1d371 90 Gene3D G3DSA:4.10.520.10 1 90 2.3E-36 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 M634_06610 84db6800118b3f1188e01ec53ac1d371 90 SMART SM00411 1 90 4.1E-44 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 M634_06610 84db6800118b3f1188e01ec53ac1d371 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 4.9E-34 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 M634_06610 84db6800118b3f1188e01ec53ac1d371 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 6.3E-21 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 M634_06610 84db6800118b3f1188e01ec53ac1d371 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 6.3E-21 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 M634_06610 84db6800118b3f1188e01ec53ac1d371 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 6.3E-21 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 M634_06610 84db6800118b3f1188e01ec53ac1d371 90 SUPERFAMILY SSF47729 1 90 3.39E-32 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 M634_06610 84db6800118b3f1188e01ec53ac1d371 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 M634_16840 813210113194d30ddcc7b01714613609 236 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.842 T 12-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 M634_16840 813210113194d30ddcc7b01714613609 236 Gene3D G3DSA:3.40.50.1580 1 236 9.0E-76 T 12-10-2018 M634_16840 813210113194d30ddcc7b01714613609 236 Pfam PF01048 Phosphorylase superfamily 17 222 1.3E-34 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 M634_16840 813210113194d30ddcc7b01714613609 236 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 233 8.7E-114 T 12-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 M634_16840 813210113194d30ddcc7b01714613609 236 SUPERFAMILY SSF53167 3 234 5.37E-92 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 M634_00730 2e77446d68474e830ab1e9975649be88 127 Pfam PF02300 Fumarate reductase subunit C 2 127 1.6E-49 T 12-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 M634_00730 2e77446d68474e830ab1e9975649be88 127 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 1 127 26.979 T 12-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 M634_00730 2e77446d68474e830ab1e9975649be88 127 Gene3D G3DSA:1.20.1300.10 1 127 3.4E-48 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M634_00730 2e77446d68474e830ab1e9975649be88 127 PIRSF PIRSF000180 1 127 2.1E-57 T 12-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 M634_00730 2e77446d68474e830ab1e9975649be88 127 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 7 127 5.0E-52 T 12-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 M634_00730 2e77446d68474e830ab1e9975649be88 127 SUPERFAMILY SSF81343 1 127 1.02E-52 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 M634_04420 14ff6078140d0bf60e9e75ea0922125d 437 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 413 2.4E-133 T 12-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 M634_04420 14ff6078140d0bf60e9e75ea0922125d 437 Pfam PF05525 Branched-chain amino acid transport protein 8 426 1.3E-150 T 12-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 M634_06210 72c74e1b419ed75ee229e1ed104d65d8 256 Pfam PF08907 Domain of unknown function (DUF1853) 33 212 4.1E-39 T 12-10-2018 IPR015003 Protein of unknown function DUF1853 M634_24280 aab0f2f54b704c63e01b0671aee4a469 149 SUPERFAMILY SSF69635 14 141 4.47E-5 T 12-10-2018 M634_21565 a4b955056e22d7abd25d2b4866748e5d 399 SUPERFAMILY SSF52540 151 332 4.98E-13 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_21565 a4b955056e22d7abd25d2b4866748e5d 399 Gene3D G3DSA:3.40.50.300 149 380 5.5E-16 T 12-10-2018 M634_21565 a4b955056e22d7abd25d2b4866748e5d 399 Pfam PF13614 AAA domain 153 310 8.5E-7 T 12-10-2018 IPR025669 AAA domain M634_21925 4de07af9b0108503df52c9d4d2ea2153 286 Pfam PF15575 Immunity protein 49 94 276 1.6E-25 T 12-10-2018 IPR029074 Immunity protein 49 M634_21735 d9dfb9abab3932c71a40ed33e3aabd39 161 Pfam PF00583 Acetyltransferase (GNAT) family 32 138 8.1E-21 T 12-10-2018 IPR000182 GNAT domain M634_21735 d9dfb9abab3932c71a40ed33e3aabd39 161 SUPERFAMILY SSF55729 5 153 2.74E-39 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_21735 d9dfb9abab3932c71a40ed33e3aabd39 161 Gene3D G3DSA:3.40.630.30 2 160 3.9E-49 T 12-10-2018 M634_04040 1fdacfb7350e318011aa8c4140ad3d5b 452 Pfam PF02321 Outer membrane efflux protein 240 434 3.6E-32 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 M634_04040 1fdacfb7350e318011aa8c4140ad3d5b 452 Pfam PF02321 Outer membrane efflux protein 25 216 2.4E-28 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 M634_04040 1fdacfb7350e318011aa8c4140ad3d5b 452 SUPERFAMILY SSF56954 1 440 2.75E-89 T 12-10-2018 M634_04040 1fdacfb7350e318011aa8c4140ad3d5b 452 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 23 447 3.6E-106 T 12-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 M634_04040 1fdacfb7350e318011aa8c4140ad3d5b 452 Gene3D G3DSA:1.20.1600.10 23 452 1.8E-118 T 12-10-2018 M634_15030 443d5e413515bcbb4e5c5095f1d00eb0 117 PIRSF PIRSF002191 1 117 4.6E-51 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_15030 443d5e413515bcbb4e5c5095f1d00eb0 117 Pfam PF01245 Ribosomal protein L19 3 113 5.1E-50 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_15030 443d5e413515bcbb4e5c5095f1d00eb0 117 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 31.297 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_15030 443d5e413515bcbb4e5c5095f1d00eb0 117 SUPERFAMILY SSF50104 2 115 1.81E-47 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily M634_15030 443d5e413515bcbb4e5c5095f1d00eb0 117 PRINTS PR00061 Ribosomal protein L19 signature 88 113 1.7E-40 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_15030 443d5e413515bcbb4e5c5095f1d00eb0 117 PRINTS PR00061 Ribosomal protein L19 signature 34 63 1.7E-40 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_15030 443d5e413515bcbb4e5c5095f1d00eb0 117 PRINTS PR00061 Ribosomal protein L19 signature 4 33 1.7E-40 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_15030 443d5e413515bcbb4e5c5095f1d00eb0 117 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 9.1E-52 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_15030 443d5e413515bcbb4e5c5095f1d00eb0 117 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 12-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 M634_15030 443d5e413515bcbb4e5c5095f1d00eb0 117 Gene3D G3DSA:2.30.30.790 3 117 1.8E-17 T 12-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 M634_23835 17b161ece49ed65af047685fe12c0aaf 278 Pfam PF02104 SURF1 family 46 253 1.5E-22 T 12-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_20140 c8aa8d3b19b1f4b363c5f5f58494d013 267 SUPERFAMILY SSF81345 40 243 7.98E-11 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M634_20140 c8aa8d3b19b1f4b363c5f5f58494d013 267 Pfam PF00950 ABC 3 transport family 4 159 9.7E-6 T 12-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 M634_20140 c8aa8d3b19b1f4b363c5f5f58494d013 267 Pfam PF00950 ABC 3 transport family 171 247 1.2E-6 T 12-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 M634_03090 13a94222a71086c78bc2916719e17de9 171 Pfam PF13505 Outer membrane protein beta-barrel domain 12 171 2.3E-16 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel M634_03090 13a94222a71086c78bc2916719e17de9 171 SUPERFAMILY SSF56925 25 171 2.09E-18 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel M634_03090 13a94222a71086c78bc2916719e17de9 171 Gene3D G3DSA:2.40.160.20 22 171 2.3E-15 T 12-10-2018 M634_06620 0e645258babc7ee1bfca482e85c9400d 97 SUPERFAMILY SSF47781 30 97 8.0E-28 T 12-10-2018 IPR010994 RuvA domain 2-like M634_06620 0e645258babc7ee1bfca482e85c9400d 97 Gene3D G3DSA:1.10.150.280 24 97 9.0E-24 T 12-10-2018 M634_06620 0e645258babc7ee1bfca482e85c9400d 97 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 35 97 2.1E-26 T 12-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain M634_06620 0e645258babc7ee1bfca482e85c9400d 97 Pfam PF12836 Helix-hairpin-helix motif 35 95 1.2E-22 T 12-10-2018 M634_06620 0e645258babc7ee1bfca482e85c9400d 97 SMART SM00278 45 64 5.2 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 M634_06620 0e645258babc7ee1bfca482e85c9400d 97 SMART SM00278 75 94 69.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 M634_20715 a95f9f5cc3bc67582b2fecca099da563 217 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 96 112 - T 12-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 M634_20715 a95f9f5cc3bc67582b2fecca099da563 217 SUPERFAMILY SSF55620 10 216 1.56E-74 T 12-10-2018 M634_20715 a95f9f5cc3bc67582b2fecca099da563 217 Gene3D G3DSA:1.10.286.10 1 84 2.5E-37 T 12-10-2018 M634_20715 a95f9f5cc3bc67582b2fecca099da563 217 Gene3D G3DSA:3.30.1130.10 85 217 2.6E-52 T 12-10-2018 M634_20715 a95f9f5cc3bc67582b2fecca099da563 217 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 34 217 33.921 T 12-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 M634_20715 a95f9f5cc3bc67582b2fecca099da563 217 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 144 154 - T 12-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 M634_20715 a95f9f5cc3bc67582b2fecca099da563 217 Pfam PF01227 GTP cyclohydrolase I 38 215 3.7E-64 T 12-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 M634_20715 a95f9f5cc3bc67582b2fecca099da563 217 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 38 216 7.0E-80 T 12-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 M634_07850 a5adc1029e60c5a85016e5ad9db83b78 310 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 25 310 1.3E-177 T 12-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 M634_07850 a5adc1029e60c5a85016e5ad9db83b78 310 SUPERFAMILY SSF53335 9 287 2.46E-52 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_07850 a5adc1029e60c5a85016e5ad9db83b78 310 Gene3D G3DSA:3.40.50.150 79 295 1.3E-46 T 12-10-2018 M634_08425 8a3ded6d64f0fe2cc40da1066b335858 231 Pfam PF13460 NAD(P)H-binding 13 162 1.5E-10 T 12-10-2018 IPR016040 NAD(P)-binding domain M634_08425 8a3ded6d64f0fe2cc40da1066b335858 231 SUPERFAMILY SSF51735 7 219 1.59E-33 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_08425 8a3ded6d64f0fe2cc40da1066b335858 231 Gene3D G3DSA:3.40.50.720 2 230 2.4E-50 T 12-10-2018 M634_14665 8f03d3599fe349cb69069d3cf3f64f88 151 SUPERFAMILY SSF75420 2 83 2.62E-26 T 12-10-2018 IPR035956 RimP, N-terminal domain superfamily M634_14665 8f03d3599fe349cb69069d3cf3f64f88 151 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 24.688 T 12-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 M634_14665 8f03d3599fe349cb69069d3cf3f64f88 151 Pfam PF17384 RimP C-terminal SH3 domain 86 151 6.1E-21 T 12-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal M634_14665 8f03d3599fe349cb69069d3cf3f64f88 151 Pfam PF02576 RimP N-terminal domain 12 83 1.7E-29 T 12-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal M634_14665 8f03d3599fe349cb69069d3cf3f64f88 151 SUPERFAMILY SSF74942 84 151 1.02E-17 T 12-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily M634_14665 8f03d3599fe349cb69069d3cf3f64f88 151 Gene3D G3DSA:3.30.300.70 1 80 8.7E-27 T 12-10-2018 IPR035956 RimP, N-terminal domain superfamily M634_07310 f691456d7931b3f55a79f132bd9e47dc 347 Gene3D G3DSA:3.40.50.720 112 233 3.6E-12 T 12-10-2018 M634_07310 f691456d7931b3f55a79f132bd9e47dc 347 Gene3D G3DSA:1.10.287.70 3 104 4.7E-13 T 12-10-2018 M634_07310 f691456d7931b3f55a79f132bd9e47dc 347 Pfam PF07885 Ion channel 26 100 9.3E-15 T 12-10-2018 IPR013099 Potassium channel domain M634_07310 f691456d7931b3f55a79f132bd9e47dc 347 SUPERFAMILY SSF81324 9 138 6.67E-18 T 12-10-2018 M634_07310 f691456d7931b3f55a79f132bd9e47dc 347 SUPERFAMILY SSF51735 121 240 6.4E-12 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_13905 10c2fc00d62e32921e0ec79f79fdac43 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 6.0E-165 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M634_13905 10c2fc00d62e32921e0ec79f79fdac43 319 Gene3D G3DSA:3.90.226.10 4 319 1.4E-120 T 12-10-2018 M634_13905 10c2fc00d62e32921e0ec79f79fdac43 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 50.996 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M634_13905 10c2fc00d62e32921e0ec79f79fdac43 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 7.9E-49 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M634_13905 10c2fc00d62e32921e0ec79f79fdac43 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 7.9E-49 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M634_13905 10c2fc00d62e32921e0ec79f79fdac43 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 7.9E-49 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M634_13905 10c2fc00d62e32921e0ec79f79fdac43 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 7.9E-49 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M634_13905 10c2fc00d62e32921e0ec79f79fdac43 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 7.9E-49 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M634_13905 10c2fc00d62e32921e0ec79f79fdac43 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 7.9E-49 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M634_13905 10c2fc00d62e32921e0ec79f79fdac43 319 SUPERFAMILY SSF52096 5 318 3.25E-106 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily M634_13905 10c2fc00d62e32921e0ec79f79fdac43 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 6 151 9.1E-64 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 M634_24130 503293ade43be0eb2e52ae74f5d4a399 188 Gene3D G3DSA:2.60.40.420 64 188 2.8E-18 T 12-10-2018 IPR008972 Cupredoxin M634_24130 503293ade43be0eb2e52ae74f5d4a399 188 SUPERFAMILY SSF49503 77 187 2.75E-22 T 12-10-2018 IPR008972 Cupredoxin M634_21705 5b9f8cc12a5067b6549655de7a1be86a 179 Pfam PF01569 PAP2 superfamily 83 158 2.8E-14 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase M634_21705 5b9f8cc12a5067b6549655de7a1be86a 179 SUPERFAMILY SSF48317 26 166 8.11E-29 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily M634_21705 5b9f8cc12a5067b6549655de7a1be86a 179 SMART SM00014 53 153 1.6E-5 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase M634_21705 5b9f8cc12a5067b6549655de7a1be86a 179 Gene3D G3DSA:1.20.144.10 82 164 8.8E-17 T 12-10-2018 M634_21405 b40be18665bc19f1e0afd818fa3ce898 393 Gene3D G3DSA:3.40.640.10 59 290 2.5E-140 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_21405 b40be18665bc19f1e0afd818fa3ce898 393 Gene3D G3DSA:3.90.1150.10 21 382 2.5E-140 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 M634_21405 b40be18665bc19f1e0afd818fa3ce898 393 Pfam PF00155 Aminotransferase class I and II 45 379 2.7E-29 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 M634_21405 b40be18665bc19f1e0afd818fa3ce898 393 SUPERFAMILY SSF53383 37 387 2.53E-72 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_19910 ccde1f511b7f0b7e5837bbdd7ba3755b 360 Gene3D G3DSA:3.40.190.10 72 323 1.6E-35 T 12-10-2018 M634_19910 ccde1f511b7f0b7e5837bbdd7ba3755b 360 Pfam PF13343 Bacterial extracellular solute-binding protein 97 318 7.8E-35 T 12-10-2018 M634_19910 ccde1f511b7f0b7e5837bbdd7ba3755b 360 Gene3D G3DSA:3.40.190.10 146 327 1.6E-35 T 12-10-2018 M634_19910 ccde1f511b7f0b7e5837bbdd7ba3755b 360 SUPERFAMILY SSF53850 51 353 4.78E-48 T 12-10-2018 M634_19400 5e42c9c5d97ba992b9577f10d914d81f 466 Pfam PF01266 FAD dependent oxidoreductase 30 393 6.1E-48 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 M634_19400 5e42c9c5d97ba992b9577f10d914d81f 466 Gene3D G3DSA:3.50.50.60 30 395 6.0E-60 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_19400 5e42c9c5d97ba992b9577f10d914d81f 466 SUPERFAMILY SSF51905 17 308 5.37E-36 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_19400 5e42c9c5d97ba992b9577f10d914d81f 466 TIGRFAM TIGR03329 Phn_aa_oxid: putative aminophosphonate oxidoreductase 5 464 2.6E-258 T 12-10-2018 IPR017715 Putative aminophosphonate oxidoreductase M634_19400 5e42c9c5d97ba992b9577f10d914d81f 466 Gene3D G3DSA:3.30.9.10 124 354 6.0E-60 T 12-10-2018 M634_17250 e63b8b367c306ed4f8ccde005c9a959a 71 Pfam PF09493 Tryptophan-rich protein (DUF2389) 12 71 9.3E-24 T 12-10-2018 IPR012663 Conserved hypothetical protein CHP02450, tryptophan-rich M634_17250 e63b8b367c306ed4f8ccde005c9a959a 71 TIGRFAM TIGR02450 TIGR02450: tryptophan-rich conserved hypothetical protein 10 71 9.9E-28 T 12-10-2018 IPR012663 Conserved hypothetical protein CHP02450, tryptophan-rich M634_10100 eebf77e2b4b8d6f9cd525eb5c9f4aba7 434 Pfam PF06629 MltA-interacting protein MipA 42 237 2.7E-21 T 12-10-2018 IPR010583 MltA-interacting MipA M634_05525 29f9ffc63867a72288d109d8c45c7a17 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 156 5.4E-78 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 M634_05525 29f9ffc63867a72288d109d8c45c7a17 156 PIRSF PIRSF004505 1 155 8.4E-44 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 M634_05525 29f9ffc63867a72288d109d8c45c7a17 156 Gene3D G3DSA:3.40.1280.10 1 156 7.7E-53 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal M634_05525 29f9ffc63867a72288d109d8c45c7a17 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 27.687 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 M634_05525 29f9ffc63867a72288d109d8c45c7a17 156 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 9.6E-49 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 M634_05525 29f9ffc63867a72288d109d8c45c7a17 156 SUPERFAMILY SSF75217 1 154 2.04E-50 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases M634_07540 d014ef297f4ab885a1a5005ae3055dd5 418 SUPERFAMILY SSF53335 21 371 5.46E-89 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_07540 d014ef297f4ab885a1a5005ae3055dd5 418 Gene3D G3DSA:3.40.50.150 149 418 2.5E-99 T 12-10-2018 M634_07540 d014ef297f4ab885a1a5005ae3055dd5 418 PIRSF PIRSF003085 26 418 1.5E-119 T 12-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 M634_07540 d014ef297f4ab885a1a5005ae3055dd5 418 Pfam PF02353 Mycolic acid cyclopropane synthetase 142 411 1.9E-78 T 12-10-2018 M634_18310 aaec01478c1f75074c639a2f6aac6ca1 128 SUPERFAMILY SSF52833 2 40 4.32E-5 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M634_18310 aaec01478c1f75074c639a2f6aac6ca1 128 Pfam PF04134 Protein of unknown function, DUF393 6 112 6.2E-27 T 12-10-2018 IPR007263 Protein of unknown function DUF393 M634_18720 a6758154a7308a43a651cebb7b13bcc1 220 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 12 216 1.4E-39 T 12-10-2018 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356 M634_18720 a6758154a7308a43a651cebb7b13bcc1 220 SUPERFAMILY SSF48613 3 216 6.27E-67 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 M634_18720 a6758154a7308a43a651cebb7b13bcc1 220 Pfam PF03070 TENA/THI-4/PQQC family 9 217 3.8E-45 T 12-10-2018 IPR004305 Thiaminase-2/PQQC M634_18720 a6758154a7308a43a651cebb7b13bcc1 220 Gene3D G3DSA:1.20.910.10 2 220 1.0E-62 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 M634_09145 49f8ca3b2b553ec6a508ee6420267ce6 125 Pfam PF09474 Type III secretion system YscX (type_III_YscX) 1 125 8.9E-52 T 12-10-2018 IPR012672 Type III secretion system YscX M634_09145 49f8ca3b2b553ec6a508ee6420267ce6 125 TIGRFAM TIGR02502 type_III_YscX: type III secretion protein, YscX family 1 125 6.0E-57 T 12-10-2018 IPR012672 Type III secretion system YscX M634_08900 e35262fde4517e1bf7bb1248e60474e9 328 Gene3D G3DSA:1.10.760.10 39 186 1.5E-113 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_08900 e35262fde4517e1bf7bb1248e60474e9 328 Pfam PF00034 Cytochrome c 195 304 1.0E-10 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_08900 e35262fde4517e1bf7bb1248e60474e9 328 Pfam PF03150 Di-haem cytochrome c peroxidase 39 186 9.1E-50 T 12-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 M634_08900 e35262fde4517e1bf7bb1248e60474e9 328 PIRSF PIRSF000294 13 328 6.6E-125 T 12-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 M634_08900 e35262fde4517e1bf7bb1248e60474e9 328 SUPERFAMILY SSF46626 173 324 2.19E-42 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_08900 e35262fde4517e1bf7bb1248e60474e9 328 SUPERFAMILY SSF46626 27 174 1.41E-48 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_08900 e35262fde4517e1bf7bb1248e60474e9 328 Gene3D G3DSA:1.10.760.10 37 310 1.5E-113 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_19095 8fbfd73bf0f41bf8a515ea5bc03686af 94 SMART SM00530 6 61 4.4E-10 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 M634_19095 8fbfd73bf0f41bf8a515ea5bc03686af 94 SUPERFAMILY SSF47413 1 65 1.83E-15 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M634_19095 8fbfd73bf0f41bf8a515ea5bc03686af 94 Gene3D G3DSA:1.10.260.40 1 70 1.3E-15 T 12-10-2018 M634_19095 8fbfd73bf0f41bf8a515ea5bc03686af 94 Pfam PF01381 Helix-turn-helix 10 59 3.2E-11 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 M634_15705 ce088cf7604e49d20ca6ed608f779259 427 SMART SM00495 332 378 6.7E-4 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M634_15705 ce088cf7604e49d20ca6ed608f779259 427 SMART SM00495 381 427 4.0 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M634_15705 ce088cf7604e49d20ca6ed608f779259 427 SUPERFAMILY SSF88713 29 336 4.45E-26 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 M634_15705 ce088cf7604e49d20ca6ed608f779259 427 Gene3D G3DSA:2.10.10.90 333 427 1.2E-34 T 12-10-2018 M634_15705 ce088cf7604e49d20ca6ed608f779259 427 SUPERFAMILY SSF51055 334 377 1.83E-13 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M634_15705 ce088cf7604e49d20ca6ed608f779259 427 SUPERFAMILY SSF51055 383 426 1.07E-14 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 M634_15705 ce088cf7604e49d20ca6ed608f779259 427 Gene3D G3DSA:3.20.20.370 26 332 5.1E-107 T 12-10-2018 M634_15705 ce088cf7604e49d20ca6ed608f779259 427 Pfam PF01522 Polysaccharide deacetylase 23 126 1.2E-12 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 M634_12605 3f97c8832b3f74a36d2f213d785d5f16 150 Pfam PF04217 Protein of unknown function, DUF412 8 146 3.7E-58 T 12-10-2018 IPR007334 Uncharacterised protein family UPF0208 M634_12605 3f97c8832b3f74a36d2f213d785d5f16 150 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 5 150 36.052 T 12-10-2018 IPR007334 Uncharacterised protein family UPF0208 M634_23715 bf5bcac4083f268b59adb103baaf99c5 358 Gene3D G3DSA:2.120.10.30 15 358 2.8E-100 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like M634_23715 bf5bcac4083f268b59adb103baaf99c5 358 Pfam PF07995 Glucose / Sorbosone dehydrogenase 30 353 1.3E-110 T 12-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase M634_23715 bf5bcac4083f268b59adb103baaf99c5 358 SUPERFAMILY SSF50952 22 350 4.58E-40 T 12-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 M634_17835 ba97dc037c543e3450b80bfe4ebebf6a 246 Gene3D G3DSA:3.40.225.10 17 243 2.9E-55 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily M634_17835 ba97dc037c543e3450b80bfe4ebebf6a 246 SUPERFAMILY SSF53639 18 235 6.87E-64 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily M634_17835 ba97dc037c543e3450b80bfe4ebebf6a 246 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 23 209 9.6E-43 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal M634_17835 ba97dc037c543e3450b80bfe4ebebf6a 246 SMART SM01007 22 210 1.6E-56 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal M634_14470 151a71f54a6abacda5a2187b4a56706b 487 Pfam PF00263 Bacterial type II and III secretion system protein 254 417 4.4E-38 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 M634_14470 151a71f54a6abacda5a2187b4a56706b 487 PRINTS PR00811 Bacterial general secretion pathway protein D signature 406 420 3.3E-10 T 12-10-2018 IPR001775 GspD/PilQ family M634_14470 151a71f54a6abacda5a2187b4a56706b 487 PRINTS PR00811 Bacterial general secretion pathway protein D signature 177 187 3.3E-10 T 12-10-2018 IPR001775 GspD/PilQ family M634_14470 151a71f54a6abacda5a2187b4a56706b 487 PRINTS PR00811 Bacterial general secretion pathway protein D signature 383 401 3.3E-10 T 12-10-2018 IPR001775 GspD/PilQ family M634_14470 151a71f54a6abacda5a2187b4a56706b 487 PRINTS PR00811 Bacterial general secretion pathway protein D signature 249 273 3.3E-10 T 12-10-2018 IPR001775 GspD/PilQ family M634_14470 151a71f54a6abacda5a2187b4a56706b 487 Pfam PF13629 Pilus formation protein N terminal region 27 96 2.3E-19 T 12-10-2018 IPR032789 Pilus formation protein, N-terminal M634_06215 e5c2680aed09406fe2c49fc087cf8b12 252 Gene3D G3DSA:3.40.1390.30 14 237 1.7E-81 T 12-10-2018 M634_06215 e5c2680aed09406fe2c49fc087cf8b12 252 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 251 8.7E-69 T 12-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 M634_06215 e5c2680aed09406fe2c49fc087cf8b12 252 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 239 3.3E-58 T 12-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 M634_06215 e5c2680aed09406fe2c49fc087cf8b12 252 Gene3D G3DSA:3.40.1390.30 97 223 1.7E-81 T 12-10-2018 M634_06215 e5c2680aed09406fe2c49fc087cf8b12 252 SUPERFAMILY SSF102705 1 251 2.35E-82 T 12-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily M634_24360 58371ee490b44cf48c00c039b95c778a 260 SUPERFAMILY SSF52540 9 237 3.47E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_24360 58371ee490b44cf48c00c039b95c778a 260 SMART SM00382 30 219 3.6E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_24360 58371ee490b44cf48c00c039b95c778a 260 Gene3D G3DSA:3.40.50.300 1 259 6.5E-64 T 12-10-2018 M634_24360 58371ee490b44cf48c00c039b95c778a 260 Pfam PF00005 ABC transporter 21 170 1.1E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_23190 a8107946299266310eab2c2dd3f5b810 304 Pfam PF01738 Dienelactone hydrolase family 91 300 3.8E-45 T 12-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 M634_23190 a8107946299266310eab2c2dd3f5b810 304 SUPERFAMILY SSF53474 77 301 8.64E-42 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_23190 a8107946299266310eab2c2dd3f5b810 304 Gene3D G3DSA:3.40.50.1820 64 301 2.3E-59 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_06815 45b41599a35a13cf00b5c5ba9d39c373 139 Gene3D G3DSA:3.10.580.10 1 128 1.4E-30 T 12-10-2018 M634_06815 45b41599a35a13cf00b5c5ba9d39c373 139 SUPERFAMILY SSF54631 1 127 1.39E-31 T 12-10-2018 M634_06815 45b41599a35a13cf00b5c5ba9d39c373 139 Pfam PF00571 CBS domain 73 127 1.6E-13 T 12-10-2018 IPR000644 CBS domain M634_06815 45b41599a35a13cf00b5c5ba9d39c373 139 Pfam PF00571 CBS domain 6 61 4.0E-7 T 12-10-2018 IPR000644 CBS domain M634_06815 45b41599a35a13cf00b5c5ba9d39c373 139 SMART SM00116 80 128 3.4E-9 T 12-10-2018 IPR000644 CBS domain M634_06815 45b41599a35a13cf00b5c5ba9d39c373 139 SMART SM00116 13 61 0.032 T 12-10-2018 IPR000644 CBS domain M634_14195 fce05c5cde159a978059e4e00e1f09a0 198 SMART SM00464 3 190 0.0061 T 12-10-2018 IPR003111 Lon, substrate-binding domain M634_14195 fce05c5cde159a978059e4e00e1f09a0 198 Gene3D G3DSA:2.30.130.40 1 111 5.3E-30 T 12-10-2018 M634_14195 fce05c5cde159a978059e4e00e1f09a0 198 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 3 118 2.8E-16 T 12-10-2018 IPR003111 Lon, substrate-binding domain M634_14195 fce05c5cde159a978059e4e00e1f09a0 198 SUPERFAMILY SSF88697 3 189 2.49E-46 T 12-10-2018 IPR015947 PUA-like superfamily M634_13265 ed5cf05f12fb6ee278856a602a8d2437 425 PIRSF PIRSF006054 1 425 3.6E-191 T 12-10-2018 IPR021144 Uncharacterised protein family UPF0597 M634_13265 ed5cf05f12fb6ee278856a602a8d2437 425 Pfam PF03313 Serine dehydratase alpha chain 128 420 9.7E-51 T 12-10-2018 IPR005130 Serine dehydratase-like, alpha subunit M634_13265 ed5cf05f12fb6ee278856a602a8d2437 425 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 4 425 34.741 T 12-10-2018 IPR021144 Uncharacterised protein family UPF0597 M634_23430 7dd91816679549a5f656df46a726e216 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 261 1.5E-58 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 M634_23430 7dd91816679549a5f656df46a726e216 261 Gene3D G3DSA:3.90.226.10 5 201 1.4E-59 T 12-10-2018 M634_23430 7dd91816679549a5f656df46a726e216 261 SUPERFAMILY SSF52096 5 260 4.42E-77 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily M634_23430 7dd91816679549a5f656df46a726e216 261 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 102 122 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 M634_23430 7dd91816679549a5f656df46a726e216 261 Gene3D G3DSA:1.10.12.10 202 260 2.7E-18 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal M634_12150 c1d19751ea2d29f95374369204979f13 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 3.4E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_12150 c1d19751ea2d29f95374369204979f13 286 Pfam PF03466 LysR substrate binding domain 89 285 5.3E-28 T 12-10-2018 IPR005119 LysR, substrate-binding M634_12150 c1d19751ea2d29f95374369204979f13 286 SUPERFAMILY SSF53850 89 286 2.71E-31 T 12-10-2018 M634_12150 c1d19751ea2d29f95374369204979f13 286 SUPERFAMILY SSF46785 4 89 1.6E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_12150 c1d19751ea2d29f95374369204979f13 286 Gene3D G3DSA:3.40.190.290 94 284 6.2E-39 T 12-10-2018 M634_12150 c1d19751ea2d29f95374369204979f13 286 Gene3D G3DSA:1.10.10.10 3 93 6.9E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_23090 8b2868ea3537a3e5cf0af6dc7c45b0a2 497 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 21 493 2.2E-200 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath M634_23090 8b2868ea3537a3e5cf0af6dc7c45b0a2 497 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 64 493 1.3E-183 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath M634_03585 b436f092d35c3aeb10f245778772314a 859 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 134 667 1.0E-75 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit M634_03585 b436f092d35c3aeb10f245778772314a 859 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 32 728 1.0E-213 T 12-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ M634_03585 b436f092d35c3aeb10f245778772314a 859 Pfam PF11874 Domain of unknown function (DUF3394) 674 853 1.3E-70 T 12-10-2018 IPR021814 Protein of unknown function DUF3394 M634_13810 37a80f5e4d3d7bd2f8a638bf84ce1ffc 417 Pfam PF00860 Permease family 3 371 4.6E-91 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 M634_13810 37a80f5e4d3d7bd2f8a638bf84ce1ffc 417 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 319 339 - T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 M634_13810 37a80f5e4d3d7bd2f8a638bf84ce1ffc 417 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 4 395 1.5E-110 T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 M634_12325 4ffee1892647968b3f418c6ccaba17d5 233 SUPERFAMILY SSF51366 1 228 8.48E-78 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 M634_12325 4ffee1892647968b3f418c6ccaba17d5 233 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 225 6.6E-52 T 12-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 M634_12325 4ffee1892647968b3f418c6ccaba17d5 233 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 231 40.493 T 12-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 M634_12325 4ffee1892647968b3f418c6ccaba17d5 233 Gene3D G3DSA:3.20.20.70 2 230 4.9E-86 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_12325 4ffee1892647968b3f418c6ccaba17d5 233 SMART SM00934 5 226 1.1E-101 T 12-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 M634_12325 4ffee1892647968b3f418c6ccaba17d5 233 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 57 70 - T 12-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 M634_12325 4ffee1892647968b3f418c6ccaba17d5 233 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 6 226 1.3E-58 T 12-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 M634_14820 78be8f7c7fd39e240ad75958c278110a 296 Gene3D G3DSA:3.30.420.40 115 261 6.8E-68 T 12-10-2018 M634_14820 78be8f7c7fd39e240ad75958c278110a 296 Gene3D G3DSA:3.30.420.40 4 114 6.8E-68 T 12-10-2018 M634_14820 78be8f7c7fd39e240ad75958c278110a 296 SUPERFAMILY SSF53067 1 111 3.61E-25 T 12-10-2018 M634_14820 78be8f7c7fd39e240ad75958c278110a 296 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 6 283 5.1E-45 T 12-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 M634_14820 78be8f7c7fd39e240ad75958c278110a 296 SUPERFAMILY SSF53067 114 283 3.33E-43 T 12-10-2018 M634_24305 3294e949e9801e6c77dda3b7a9099c65 92 SUPERFAMILY SSF54534 7 90 1.44E-25 T 12-10-2018 M634_24305 3294e949e9801e6c77dda3b7a9099c65 92 Gene3D G3DSA:3.10.50.40 2 92 9.6E-34 T 12-10-2018 M634_24305 3294e949e9801e6c77dda3b7a9099c65 92 Pfam PF13616 PPIC-type PPIASE domain 13 89 2.1E-22 T 12-10-2018 M634_04735 e83f80bf7eb0e0d62336ed8f693e6f96 84 Gene3D G3DSA:3.30.70.20 2 83 5.9E-34 T 12-10-2018 M634_04735 e83f80bf7eb0e0d62336ed8f693e6f96 84 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site M634_04735 e83f80bf7eb0e0d62336ed8f693e6f96 84 SUPERFAMILY SSF54862 4 72 5.59E-17 T 12-10-2018 M634_04735 e83f80bf7eb0e0d62336ed8f693e6f96 84 Pfam PF00037 4Fe-4S binding domain 5 25 6.6E-6 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain M634_07505 d19333d2cbb1e4551c7f9998ec91e415 228 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 6.1E-55 T 12-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 M634_07505 d19333d2cbb1e4551c7f9998ec91e415 228 SUPERFAMILY SSF52540 1 215 3.35E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_07505 d19333d2cbb1e4551c7f9998ec91e415 228 PIRSF PIRSF006755 1 226 1.2E-79 T 12-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 M634_07505 d19333d2cbb1e4551c7f9998ec91e415 228 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 212 29.933 T 12-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 M634_07505 d19333d2cbb1e4551c7f9998ec91e415 228 Pfam PF13500 AAA domain 4 211 1.2E-39 T 12-10-2018 M634_07505 d19333d2cbb1e4551c7f9998ec91e415 228 Gene3D G3DSA:3.40.50.300 3 224 4.7E-70 T 12-10-2018 M634_10525 bc3cdfee6709df6a7b3de8295fb4e147 76 SUPERFAMILY SSF46689 7 74 2.33E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_10525 bc3cdfee6709df6a7b3de8295fb4e147 76 Pfam PF01527 Transposase 9 59 4.1E-8 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 M634_18850 47e81efdaa178905d1903b009cb8a3dd 252 Pfam PF11932 Protein of unknown function (DUF3450) 6 245 3.2E-87 T 12-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 M634_18850 47e81efdaa178905d1903b009cb8a3dd 252 PIRSF PIRSF028069 1 252 1.6E-109 T 12-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 M634_08865 2d26e7aecc6fc2a920d178a5971ee98b 553 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 45 540 1.0E-170 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 M634_08865 2d26e7aecc6fc2a920d178a5971ee98b 553 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 84 540 2.0E-134 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 M634_04925 f6e03058b34aaf1e52f46a75a058d6fd 316 Gene3D G3DSA:1.10.260.40 7 116 9.7E-25 T 12-10-2018 M634_04925 f6e03058b34aaf1e52f46a75a058d6fd 316 Pfam PF13413 Helix-turn-helix domain 20 78 1.5E-19 T 12-10-2018 M634_04925 f6e03058b34aaf1e52f46a75a058d6fd 316 SUPERFAMILY SSF47413 14 79 4.79E-8 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M634_04925 f6e03058b34aaf1e52f46a75a058d6fd 316 Pfam PF13464 Domain of unknown function (DUF4115) 241 314 5.6E-26 T 12-10-2018 IPR025194 Domain of unknown function DUF4115 M634_04925 f6e03058b34aaf1e52f46a75a058d6fd 316 SMART SM00530 19 80 7.8E-5 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 M634_20760 ee8fdf844c4136b726db729c4c07c9e9 145 SUPERFAMILY SSF55785 10 127 7.5E-12 T 12-10-2018 IPR035965 PAS domain superfamily M634_20760 ee8fdf844c4136b726db729c4c07c9e9 145 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 16 77 1.3E-5 T 12-10-2018 IPR000014 PAS domain M634_20760 ee8fdf844c4136b726db729c4c07c9e9 145 Gene3D G3DSA:3.30.450.20 6 140 1.2E-31 T 12-10-2018 M634_20760 ee8fdf844c4136b726db729c4c07c9e9 145 SMART SM00091 12 78 0.0096 T 12-10-2018 IPR000014 PAS domain M634_20760 ee8fdf844c4136b726db729c4c07c9e9 145 Pfam PF00989 PAS fold 16 134 2.0E-6 T 12-10-2018 IPR013767 PAS fold GO:0006355 M634_10035 abef0b94477d9b8ccae264512de0c8ca 212 Pfam PF02397 Bacterial sugar transferase 14 207 4.5E-62 T 12-10-2018 IPR003362 Bacterial sugar transferase M634_17990 d0460f015dab2ed6e521b1e6e430b208 209 Gene3D G3DSA:3.20.20.70 1 209 5.4E-76 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_17990 d0460f015dab2ed6e521b1e6e430b208 209 SUPERFAMILY SSF51569 4 208 2.93E-67 T 12-10-2018 M634_17990 d0460f015dab2ed6e521b1e6e430b208 209 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 12-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 M634_17990 d0460f015dab2ed6e521b1e6e430b208 209 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 5 206 5.7E-83 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 M634_17990 d0460f015dab2ed6e521b1e6e430b208 209 Pfam PF01081 KDPG and KHG aldolase 4 198 4.4E-80 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 M634_17990 d0460f015dab2ed6e521b1e6e430b208 209 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 12-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 M634_15055 6c8392dd3201ac22e233d59fdc5620cf 264 Pfam PF01578 Cytochrome C assembly protein 39 262 1.2E-45 T 12-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 M634_23100 c789e8a341512bb022779bf5cf5c36d7 373 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 10 366 1.3E-78 T 12-10-2018 IPR017740 Type VI secretion system-associated, ImpA M634_23100 c789e8a341512bb022779bf5cf5c36d7 373 Pfam PF06812 ImpA, N-terminal, type VI secretion system 13 142 9.8E-31 T 12-10-2018 IPR010657 ImpA, N-terminal M634_01270 fdbdb7df44a266fc457e5d63d09e49ae 183 SUPERFAMILY SSF64288 11 178 6.12E-46 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily M634_01270 fdbdb7df44a266fc457e5d63d09e49ae 183 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 19 178 23.643 T 12-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 M634_01270 fdbdb7df44a266fc457e5d63d09e49ae 183 Gene3D G3DSA:3.40.1410.10 13 178 3.7E-41 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily M634_01270 fdbdb7df44a266fc457e5d63d09e49ae 183 Pfam PF04345 Chorismate lyase 18 182 4.8E-57 T 12-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 M634_24015 b8588b2c1499969812080a8497035be7 423 Gene3D G3DSA:3.40.50.720 159 320 1.4E-35 T 12-10-2018 M634_24015 b8588b2c1499969812080a8497035be7 423 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 99 4.7E-6 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 M634_24015 b8588b2c1499969812080a8497035be7 423 Pfam PF00107 Zinc-binding dehydrogenase 188 327 2.4E-11 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 M634_24015 b8588b2c1499969812080a8497035be7 423 Gene3D G3DSA:3.90.180.10 16 351 1.4E-35 T 12-10-2018 M634_24015 b8588b2c1499969812080a8497035be7 423 SUPERFAMILY SSF50129 4 189 2.13E-20 T 12-10-2018 IPR011032 GroES-like superfamily M634_24015 b8588b2c1499969812080a8497035be7 423 SUPERFAMILY SSF51735 160 338 7.18E-15 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_11635 97b7b81f49576bf5b2e1c26971c00bbc 177 Gene3D G3DSA:2.10.109.10 54 173 3.1E-6 T 12-10-2018 M634_11635 97b7b81f49576bf5b2e1c26971c00bbc 177 SUPERFAMILY SSF51306 94 155 2.79E-5 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily M634_17375 d4a11cca13d88c30919583e90a254759 96 SUPERFAMILY SSF54909 1 80 1.38E-25 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel M634_17375 d4a11cca13d88c30919583e90a254759 96 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 1.2E-18 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain M634_17375 d4a11cca13d88c30919583e90a254759 96 Gene3D G3DSA:3.30.70.100 1 89 1.0E-26 T 12-10-2018 M634_06565 81b180d179d9769677e3869c2e03c5cf 453 PIRSF PIRSF006066 1 447 1.2E-136 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 M634_06565 81b180d179d9769677e3869c2e03c5cf 453 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 260 2.1E-85 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 M634_06565 81b180d179d9769677e3869c2e03c5cf 453 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 437 4.6E-117 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit M634_02595 5983b22542806655bdd8ead1c0aed849 193 Pfam PF13511 Domain of unknown function (DUF4124) 15 68 3.1E-12 T 12-10-2018 IPR025392 Domain of unknown function DUF4124 M634_06630 47e4d72b3d514937938797b8fefa00e8 204 Pfam PF03942 DTW domain 3 188 8.1E-51 T 12-10-2018 IPR005636 DTW M634_06630 47e4d72b3d514937938797b8fefa00e8 204 SMART SM01144 1 193 1.3E-69 T 12-10-2018 IPR005636 DTW M634_23515 702629e1c25e59e3e3bcde61bb9dda0b 132 Pfam PF11225 Protein of unknown function (DUF3024) 73 131 2.7E-20 T 12-10-2018 IPR021388 Bacteriophage 933W, L0084 M634_24335 d45d1b1a6adc635aa75b4e4e99c4e2ff 247 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 168 245 2.0E-21 T 12-10-2018 IPR037682 TonB, C-terminal GO:0055085 M634_24335 d45d1b1a6adc635aa75b4e4e99c4e2ff 247 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 169 245 3.4E-22 T 12-10-2018 IPR006260 TonB/TolA, C-terminal M634_24335 d45d1b1a6adc635aa75b4e4e99c4e2ff 247 Gene3D G3DSA:3.30.1150.10 143 246 4.1E-21 T 12-10-2018 M634_24335 d45d1b1a6adc635aa75b4e4e99c4e2ff 247 SUPERFAMILY SSF74653 167 243 9.03E-22 T 12-10-2018 M634_07480 a0fa87d05fe2e548bdd860c911a1bd31 88 SUPERFAMILY SSF57716 38 71 5.13E-7 T 12-10-2018 M634_07480 a0fa87d05fe2e548bdd860c911a1bd31 88 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 36 68 2.2E-13 T 12-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 M634_07480 a0fa87d05fe2e548bdd860c911a1bd31 88 Gene3D G3DSA:1.20.120.910 1 73 1.1E-22 T 12-10-2018 M634_20905 96435948441c1a19958af036b639be52 300 Gene3D G3DSA:3.20.20.70 1 296 2.6E-127 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_20905 96435948441c1a19958af036b639be52 300 SUPERFAMILY SSF51569 3 290 1.52E-72 T 12-10-2018 M634_20905 96435948441c1a19958af036b639be52 300 Pfam PF00682 HMGL-like 5 274 2.0E-51 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 M634_19385 bd04d6141ce57c7833e7f2e03590bae8 183 Pfam PF13505 Outer membrane protein beta-barrel domain 7 183 9.9E-16 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel M634_19385 bd04d6141ce57c7833e7f2e03590bae8 183 Gene3D G3DSA:2.40.160.20 23 183 5.0E-18 T 12-10-2018 M634_19385 bd04d6141ce57c7833e7f2e03590bae8 183 SUPERFAMILY SSF56925 21 183 9.68E-19 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel M634_22065 221feabc58cdc07884220ddc1ea195cb 306 Gene3D G3DSA:1.10.3720.10 68 303 2.2E-51 T 12-10-2018 IPR035906 MetI-like superfamily M634_22065 221feabc58cdc07884220ddc1ea195cb 306 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 71 140 2.4E-15 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 M634_22065 221feabc58cdc07884220ddc1ea195cb 306 SUPERFAMILY SSF161098 72 293 7.33E-41 T 12-10-2018 IPR035906 MetI-like superfamily M634_22065 221feabc58cdc07884220ddc1ea195cb 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 300 2.6E-22 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_10840 cb79e69190cf1cfde89fb71e5341c981 212 SUPERFAMILY SSF53335 3 200 5.73E-35 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_10840 cb79e69190cf1cfde89fb71e5341c981 212 Pfam PF13489 Methyltransferase domain 38 193 1.1E-16 T 12-10-2018 M634_10840 cb79e69190cf1cfde89fb71e5341c981 212 Gene3D G3DSA:3.40.50.150 9 210 1.4E-32 T 12-10-2018 M634_14130 85a3bd980ff96eea1e3fa3cbb8f797e1 210 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 195 2.6E-62 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 M634_14130 85a3bd980ff96eea1e3fa3cbb8f797e1 210 PIRSF PIRSF006102 3 210 5.4E-73 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 M634_14130 85a3bd980ff96eea1e3fa3cbb8f797e1 210 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 36.857 T 12-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 M634_14130 85a3bd980ff96eea1e3fa3cbb8f797e1 210 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 3 207 1.5E-109 T 12-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 M634_14020 a8773241d069147ad6132a78619df7b7 168 Pfam PF13302 Acetyltransferase (GNAT) domain 30 139 1.4E-19 T 12-10-2018 IPR000182 GNAT domain M634_14020 a8773241d069147ad6132a78619df7b7 168 SUPERFAMILY SSF55729 3 146 4.37E-24 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_14020 a8773241d069147ad6132a78619df7b7 168 Gene3D G3DSA:3.40.630.30 1 148 1.0E-25 T 12-10-2018 M634_06090 ba6e34bbaaec981eb6fbe6c2baff1a09 135 SMART SM00116 83 130 1.9E-5 T 12-10-2018 IPR000644 CBS domain M634_06090 ba6e34bbaaec981eb6fbe6c2baff1a09 135 SMART SM00116 16 65 11.0 T 12-10-2018 IPR000644 CBS domain M634_06090 ba6e34bbaaec981eb6fbe6c2baff1a09 135 SUPERFAMILY SSF54631 7 126 3.16E-24 T 12-10-2018 M634_06090 ba6e34bbaaec981eb6fbe6c2baff1a09 135 Pfam PF00571 CBS domain 78 125 2.0E-10 T 12-10-2018 IPR000644 CBS domain M634_06090 ba6e34bbaaec981eb6fbe6c2baff1a09 135 Gene3D G3DSA:3.10.580.10 1 134 1.3E-26 T 12-10-2018 M634_04485 3a7e5296b64c4f64efa626914b2f2ce3 174 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 M634_04485 3a7e5296b64c4f64efa626914b2f2ce3 174 Pfam PF00293 NUDIX domain 7 145 6.4E-27 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 M634_04485 3a7e5296b64c4f64efa626914b2f2ce3 174 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.547 T 12-10-2018 IPR022927 RNA pyrophosphohydrolase RppH M634_04485 3a7e5296b64c4f64efa626914b2f2ce3 174 PRINTS PR00502 NUDIX hydrolase family signature 33 47 3.5E-8 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 M634_04485 3a7e5296b64c4f64efa626914b2f2ce3 174 PRINTS PR00502 NUDIX hydrolase family signature 47 62 3.5E-8 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 M634_04485 3a7e5296b64c4f64efa626914b2f2ce3 174 Gene3D G3DSA:3.90.79.10 1 159 7.9E-51 T 12-10-2018 M634_04485 3a7e5296b64c4f64efa626914b2f2ce3 174 SUPERFAMILY SSF55811 6 152 8.53E-32 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 M634_03720 d16a8bc84e86e30d9afe00dee4a42a4b 348 Pfam PF13528 Glycosyl transferase family 1 1 300 2.6E-37 T 12-10-2018 M634_03720 d16a8bc84e86e30d9afe00dee4a42a4b 348 TIGRFAM TIGR00661 MJ1255: conserved hypothetical protein 2 311 1.4E-106 T 12-10-2018 IPR005262 Conserved hypothetical protein CHP00661 M634_03720 d16a8bc84e86e30d9afe00dee4a42a4b 348 Gene3D G3DSA:3.40.50.2000 199 314 1.1E-5 T 12-10-2018 M634_03720 d16a8bc84e86e30d9afe00dee4a42a4b 348 SUPERFAMILY SSF53756 8 291 1.06E-12 T 12-10-2018 M634_22800 82b0f8ead411bd4839c8e6b33e843b16 245 TIGRFAM TIGR03950 sidero_Fe_reduc: siderophore ferric iron reductase, AHA_1954 family 9 231 7.7E-90 T 12-10-2018 IPR023998 Siderophore ferric iron reductase, AHA1954 family M634_22800 82b0f8ead411bd4839c8e6b33e843b16 245 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 211 231 1.0E-5 T 12-10-2018 IPR024726 Ferric iron reductase, C-terminal GO:0051537 M634_20860 e5eaf0a99bda6bf42d2c3296c0659a4c 125 SUPERFAMILY SSF69118 4 122 6.48E-36 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 M634_20860 e5eaf0a99bda6bf42d2c3296c0659a4c 125 Gene3D G3DSA:1.20.1290.10 2 125 2.2E-41 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 M634_20860 e5eaf0a99bda6bf42d2c3296c0659a4c 125 Pfam PF02627 Carboxymuconolactone decarboxylase family 33 118 2.9E-22 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 M634_21250 e181b4e566de5f38930bb4f06e04c45f 140 SMART SM00862 59 135 2.1E-13 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_21250 e181b4e566de5f38930bb4f06e04c45f 140 SUPERFAMILY SSF46894 43 135 5.39E-19 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M634_21250 e181b4e566de5f38930bb4f06e04c45f 140 Pfam PF00486 Transcriptional regulatory protein, C terminal 60 135 2.8E-18 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_21250 e181b4e566de5f38930bb4f06e04c45f 140 Gene3D G3DSA:1.10.10.10 26 139 1.1E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_22990 066667893d642e6f81b43f149df670c4 510 Pfam PF03606 C4-dicarboxylate anaerobic carrier 20 505 2.1E-138 T 12-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 M634_23690 114542aff8f2014be7f46f6f44545dec 188 SUPERFAMILY SSF55729 95 177 2.21E-6 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_23690 114542aff8f2014be7f46f6f44545dec 188 Gene3D G3DSA:3.40.630.30 52 180 5.6E-8 T 12-10-2018 M634_08565 bee99f7038babe55cec9de12a1aaec97 418 Gene3D G3DSA:3.30.9.10 142 360 5.7E-35 T 12-10-2018 M634_08565 bee99f7038babe55cec9de12a1aaec97 418 Gene3D G3DSA:3.50.50.60 112 402 5.7E-35 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_08565 bee99f7038babe55cec9de12a1aaec97 418 SUPERFAMILY SSF54373 273 360 1.57E-8 T 12-10-2018 M634_08565 bee99f7038babe55cec9de12a1aaec97 418 Gene3D G3DSA:3.50.50.60 12 65 2.2E-11 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily M634_08565 bee99f7038babe55cec9de12a1aaec97 418 SUPERFAMILY SSF51971 10 405 2.82E-39 T 12-10-2018 M634_08565 bee99f7038babe55cec9de12a1aaec97 418 Pfam PF01266 FAD dependent oxidoreductase 12 399 2.3E-52 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 M634_23340 ec95854ab965f12373f69bd3a64b67f5 190 Gene3D G3DSA:2.60.130.10 18 187 2.9E-43 T 12-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 M634_23340 ec95854ab965f12373f69bd3a64b67f5 190 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 61 89 - T 12-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 M634_23340 ec95854ab965f12373f69bd3a64b67f5 190 Pfam PF00775 Dioxygenase 32 156 4.8E-22 T 12-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 M634_23340 ec95854ab965f12373f69bd3a64b67f5 190 SUPERFAMILY SSF49482 17 189 3.66E-47 T 12-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 M634_24430 c9e76bf56c41e17b5b07cf7bce84c95f 305 Pfam PF00246 Zinc carboxypeptidase 74 146 1.1E-6 T 12-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 M634_24430 c9e76bf56c41e17b5b07cf7bce84c95f 305 Gene3D G3DSA:3.40.630.10 4 305 2.4E-117 T 12-10-2018 M634_24430 c9e76bf56c41e17b5b07cf7bce84c95f 305 SUPERFAMILY SSF53187 36 289 4.96E-39 T 12-10-2018 M634_12905 276634740da20fce12ed1a971e8f967a 602 Gene3D G3DSA:3.40.720.10 248 548 4.2E-38 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 M634_12905 276634740da20fce12ed1a971e8f967a 602 Pfam PF00884 Sulfatase 267 515 6.5E-21 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 M634_12905 276634740da20fce12ed1a971e8f967a 602 Pfam PF11893 Domain of unknown function (DUF3413) 6 250 2.0E-98 T 12-10-2018 IPR024588 Inner membrane protein YejM, N-terminal M634_12905 276634740da20fce12ed1a971e8f967a 602 SUPERFAMILY SSF53649 257 584 1.05E-51 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 M634_12905 276634740da20fce12ed1a971e8f967a 602 PIRSF PIRSF004950 6 600 2.4E-254 T 12-10-2018 IPR012159 Inner membrane protein YejM M634_21335 112eedbb50016b708431427f1f834a56 215 Gene3D G3DSA:2.40.160.20 17 215 1.4E-22 T 12-10-2018 M634_21335 112eedbb50016b708431427f1f834a56 215 SUPERFAMILY SSF56925 20 215 8.63E-23 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel M634_21335 112eedbb50016b708431427f1f834a56 215 Pfam PF13505 Outer membrane protein beta-barrel domain 5 215 2.3E-17 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel M634_14570 fa5fc2b3cc78eb06290bc0749ceade74 65 Pfam PF17320 Family of unknown function (DUF5363) 1 46 4.3E-9 T 12-10-2018 IPR035292 Protein of unknown function DUF5363 M634_12880 0b345bc90b52667383c6102eba96b0b7 477 Pfam PF03553 Na+/H+ antiporter family 161 453 3.0E-66 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 M634_12880 0b345bc90b52667383c6102eba96b0b7 477 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 7 457 5.0E-163 T 12-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 M634_02910 c72d4990e2cf36802e1fbe2ea44d48bb 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 12-10-2018 IPR018336 Ribonuclease PH, conserved site M634_02910 c72d4990e2cf36802e1fbe2ea44d48bb 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 1.6E-23 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 M634_02910 c72d4990e2cf36802e1fbe2ea44d48bb 238 Gene3D G3DSA:3.30.230.70 13 238 3.8E-63 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 M634_02910 c72d4990e2cf36802e1fbe2ea44d48bb 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 4.0E-111 T 12-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 M634_02910 c72d4990e2cf36802e1fbe2ea44d48bb 238 SUPERFAMILY SSF54211 1 181 3.44E-45 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold M634_02910 c72d4990e2cf36802e1fbe2ea44d48bb 238 Pfam PF03725 3' exoribonuclease family, domain 2 159 222 2.1E-10 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 M634_02910 c72d4990e2cf36802e1fbe2ea44d48bb 238 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 43.798 T 12-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 M634_02910 c72d4990e2cf36802e1fbe2ea44d48bb 238 SUPERFAMILY SSF55666 153 236 3.01E-25 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 M634_01275 b5cfbdadbe5d9ffca382a4afe1f4e96b 136 Pfam PF03748 Flagellar basal body-associated protein FliL 34 136 1.2E-19 T 12-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 M634_06760 7a1761ae656e5afe523e66f0ba133818 364 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 31 316 2.1E-41 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme M634_06760 7a1761ae656e5afe523e66f0ba133818 364 Gene3D G3DSA:3.40.50.1100 25 324 1.9E-68 T 12-10-2018 M634_06760 7a1761ae656e5afe523e66f0ba133818 364 Gene3D G3DSA:3.40.50.1100 51 157 1.9E-68 T 12-10-2018 M634_06760 7a1761ae656e5afe523e66f0ba133818 364 SUPERFAMILY SSF53686 23 335 1.06E-70 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme M634_05280 796647f71fcc01e5bc627e38421a3e03 429 Pfam PF00860 Permease family 17 391 2.1E-56 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 M634_05280 796647f71fcc01e5bc627e38421a3e03 429 PIRSF PIRSF005353 1 429 4.2E-189 T 12-10-2018 IPR026033 Purine permease PbuG-like M634_10595 e4e01fea4f8e3468b01c282cd10f3667 273 SMART SM00507 188 242 0.002 T 12-10-2018 IPR003615 HNH nuclease M634_10595 e4e01fea4f8e3468b01c282cd10f3667 273 Pfam PF01844 HNH endonuclease 201 246 4.7E-6 T 12-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 M634_03885 1fae097ed999fd3c0929f77f56bdfce3 422 Pfam PF05272 Virulence-associated protein E 108 284 1.3E-29 T 12-10-2018 IPR007936 Virulence-associated E M634_13235 7ce0e31b14ae671ebe8a920507f22e0a 344 Pfam PF00589 Phage integrase family 177 324 1.3E-16 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 M634_13235 7ce0e31b14ae671ebe8a920507f22e0a 344 SUPERFAMILY SSF56349 65 332 4.41E-39 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 M634_13235 7ce0e31b14ae671ebe8a920507f22e0a 344 Gene3D G3DSA:1.10.443.10 172 342 1.2E-37 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 M634_07435 c8974a68e4e3082901a4c45aa2da80c6 398 Pfam PF13679 Methyltransferase domain 108 230 1.3E-17 T 12-10-2018 IPR025714 Methyltransferase domain M634_07435 c8974a68e4e3082901a4c45aa2da80c6 398 SUPERFAMILY SSF53335 118 198 1.75E-6 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_07435 c8974a68e4e3082901a4c45aa2da80c6 398 Gene3D G3DSA:3.40.50.150 81 242 1.9E-5 T 12-10-2018 M634_20445 073573455fbdab513bfeb40d9677e3c4 365 Gene3D G3DSA:3.40.50.2300 33 363 8.8E-149 T 12-10-2018 M634_20445 073573455fbdab513bfeb40d9677e3c4 365 Gene3D G3DSA:3.40.50.2300 180 359 8.8E-149 T 12-10-2018 M634_20445 073573455fbdab513bfeb40d9677e3c4 365 Pfam PF13407 Periplasmic binding protein domain 69 324 8.4E-15 T 12-10-2018 IPR025997 Periplasmic binding protein M634_20445 073573455fbdab513bfeb40d9677e3c4 365 SUPERFAMILY SSF53822 27 364 8.06E-84 T 12-10-2018 IPR028082 Periplasmic binding protein-like I M634_14435 48820c9e4f8479d3f44cd7ded62b0c0a 322 Pfam PF00482 Type II secretion system (T2SS), protein F 156 279 7.5E-18 T 12-10-2018 IPR018076 Type II secretion system F domain M634_19975 f99f427a1a8193263feec43fe69e5961 344 Pfam PF13416 Bacterial extracellular solute-binding protein 40 307 1.1E-37 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein M634_19975 f99f427a1a8193263feec43fe69e5961 344 PIRSF PIRSF019574 2 344 1.3E-107 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 M634_19975 f99f427a1a8193263feec43fe69e5961 344 Gene3D G3DSA:3.40.190.10 130 338 7.8E-107 T 12-10-2018 M634_19975 f99f427a1a8193263feec43fe69e5961 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 289 315 2.0E-64 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 M634_19975 f99f427a1a8193263feec43fe69e5961 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 45 66 2.0E-64 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 M634_19975 f99f427a1a8193263feec43fe69e5961 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 89 102 2.0E-64 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 M634_19975 f99f427a1a8193263feec43fe69e5961 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 200 219 2.0E-64 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 M634_19975 f99f427a1a8193263feec43fe69e5961 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 120 136 2.0E-64 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 M634_19975 f99f427a1a8193263feec43fe69e5961 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 145 159 2.0E-64 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 M634_19975 f99f427a1a8193263feec43fe69e5961 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 244 263 2.0E-64 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 M634_19975 f99f427a1a8193263feec43fe69e5961 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 29 45 2.0E-64 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 M634_19975 f99f427a1a8193263feec43fe69e5961 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 163 182 2.0E-64 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 M634_19975 f99f427a1a8193263feec43fe69e5961 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 73 87 2.0E-64 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 M634_19975 f99f427a1a8193263feec43fe69e5961 344 SUPERFAMILY SSF53850 24 341 4.39E-87 T 12-10-2018 M634_19975 f99f427a1a8193263feec43fe69e5961 344 Gene3D G3DSA:3.40.190.10 27 308 7.8E-107 T 12-10-2018 M634_24265 ae51a10353c59eba049e6c7244471fcb 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 133 151 1.3E-10 T 12-10-2018 IPR002177 DNA-binding protein Dps M634_24265 ae51a10353c59eba049e6c7244471fcb 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 62 78 1.3E-10 T 12-10-2018 IPR002177 DNA-binding protein Dps M634_24265 ae51a10353c59eba049e6c7244471fcb 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 38 54 1.3E-10 T 12-10-2018 IPR002177 DNA-binding protein Dps M634_24265 ae51a10353c59eba049e6c7244471fcb 156 SUPERFAMILY SSF47240 4 154 3.57E-46 T 12-10-2018 IPR009078 Ferritin-like superfamily M634_24265 ae51a10353c59eba049e6c7244471fcb 156 ProSitePatterns PS00818 Dps protein family signature 1. 38 54 - T 12-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 M634_24265 ae51a10353c59eba049e6c7244471fcb 156 PIRSF PIRSF005900 1 156 1.1E-47 T 12-10-2018 IPR002177 DNA-binding protein Dps M634_24265 ae51a10353c59eba049e6c7244471fcb 156 ProSitePatterns PS00819 Dps protein family signature 2. 64 78 - T 12-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 M634_24265 ae51a10353c59eba049e6c7244471fcb 156 Pfam PF00210 Ferritin-like domain 18 154 1.4E-28 T 12-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 M634_24265 ae51a10353c59eba049e6c7244471fcb 156 Gene3D G3DSA:1.20.1260.10 1 156 5.3E-57 T 12-10-2018 IPR012347 Ferritin-like M634_15825 80471aea24c4fd89b7b616acfda1e18e 418 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 4.0E-182 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 M634_15825 80471aea24c4fd89b7b616acfda1e18e 418 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 11 407 1.6E-122 T 12-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 M634_15825 80471aea24c4fd89b7b616acfda1e18e 418 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 43.79 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 M634_15825 80471aea24c4fd89b7b616acfda1e18e 418 Gene3D G3DSA:3.65.10.10 22 229 2.8E-171 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 M634_15825 80471aea24c4fd89b7b616acfda1e18e 418 Gene3D G3DSA:3.65.10.10 12 414 2.8E-171 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 M634_15825 80471aea24c4fd89b7b616acfda1e18e 418 SUPERFAMILY SSF55205 6 417 1.8E-141 T 12-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 M634_18470 3ed3bc99986239db3ebc8718fb1b1396 206 SUPERFAMILY SSF52833 3 202 7.98E-26 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M634_18470 3ed3bc99986239db3ebc8718fb1b1396 206 Gene3D G3DSA:3.40.30.10 1 205 3.0E-42 T 12-10-2018 M634_18470 3ed3bc99986239db3ebc8718fb1b1396 206 Pfam PF01323 DSBA-like thioredoxin domain 3 182 2.3E-9 T 12-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 M634_04340 4cefa865e6c099572c70b8abc4900b99 238 SUPERFAMILY SSF52172 2 130 2.99E-36 T 12-10-2018 IPR011006 CheY-like superfamily M634_04340 4cefa865e6c099572c70b8abc4900b99 238 SMART SM00862 156 232 2.4E-14 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_04340 4cefa865e6c099572c70b8abc4900b99 238 Pfam PF00072 Response regulator receiver domain 6 113 3.4E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_04340 4cefa865e6c099572c70b8abc4900b99 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.8E-17 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 M634_04340 4cefa865e6c099572c70b8abc4900b99 238 Gene3D G3DSA:1.10.10.10 123 236 5.0E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_04340 4cefa865e6c099572c70b8abc4900b99 238 SMART SM00448 4 114 2.7E-37 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 M634_04340 4cefa865e6c099572c70b8abc4900b99 238 SUPERFAMILY SSF46894 137 233 9.92E-21 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 M634_04340 4cefa865e6c099572c70b8abc4900b99 238 Gene3D G3DSA:3.40.50.2300 2 122 3.5E-33 T 12-10-2018 M634_17430 e22657c36f0f23735755a9f049b4f392 240 SUPERFAMILY SSF55469 1 238 4.45E-76 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 M634_17430 e22657c36f0f23735755a9f049b4f392 240 Pfam PF00881 Nitroreductase family 8 159 9.8E-26 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 M634_17430 e22657c36f0f23735755a9f049b4f392 240 PIRSF PIRSF005426 1 240 1.6E-85 T 12-10-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 M634_17430 e22657c36f0f23735755a9f049b4f392 240 Gene3D G3DSA:3.40.109.10 1 240 1.9E-79 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 M634_14040 ce4533789e9b3bd3331fd4f4c731effb 528 Pfam PF03806 AbgT putative transporter family 19 526 7.4E-226 T 12-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 M634_20415 bdca699b6b457761b0b637b81ed5a625 460 Pfam PF01554 MatE 37 197 1.2E-21 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M634_20415 bdca699b6b457761b0b637b81ed5a625 460 Pfam PF01554 MatE 256 413 1.3E-17 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M634_20415 bdca699b6b457761b0b637b81ed5a625 460 TIGRFAM TIGR00797 matE: MATE efflux family protein 37 419 1.9E-46 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M634_20415 bdca699b6b457761b0b637b81ed5a625 460 PIRSF PIRSF006603 12 459 9.7E-82 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M634_09345 c5bce57ffe724b3b0c85f2afd92cc219 222 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 216 3.2E-45 T 12-10-2018 IPR006214 Bax inhibitor 1-related M634_13530 ebe42b1a52dba749ae175f6685d3d634 366 SUPERFAMILY SSF50341 220 356 9.29E-15 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 M634_13530 ebe42b1a52dba749ae175f6685d3d634 366 Pfam PF01584 CheW-like domain 223 355 9.6E-15 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 M634_13530 ebe42b1a52dba749ae175f6685d3d634 366 SMART SM00260 219 353 3.4E-4 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 M634_13530 ebe42b1a52dba749ae175f6685d3d634 366 PIRSF PIRSF020479 5 366 9.5E-152 T 12-10-2018 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like M634_10645 3eed76cd943738c130f4ed983a0c0a57 157 Gene3D G3DSA:3.30.460.10 4 157 2.3E-20 T 12-10-2018 M634_10645 3eed76cd943738c130f4ed983a0c0a57 157 SUPERFAMILY SSF81301 8 156 1.05E-31 T 12-10-2018 M634_10645 3eed76cd943738c130f4ed983a0c0a57 157 Pfam PF04229 GrpB protein 8 154 3.5E-23 T 12-10-2018 IPR007344 GrpB/Dephospho-CoA kinase M634_17900 bed88e88a8f9d7c4b44cb11b4f91429f 228 Pfam PF01965 DJ-1/PfpI family 32 202 1.4E-18 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 M634_17900 bed88e88a8f9d7c4b44cb11b4f91429f 228 Gene3D G3DSA:3.40.50.880 22 227 4.0E-47 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M634_17900 bed88e88a8f9d7c4b44cb11b4f91429f 228 SUPERFAMILY SSF52317 32 222 9.82E-40 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M634_21690 175a3952f3134eaf689e884c8d55448b 301 TIGRFAM TIGR00688 rarD: protein RarD 7 259 3.3E-52 T 12-10-2018 IPR004626 RarD protein GO:0005887 M634_21690 175a3952f3134eaf689e884c8d55448b 301 SUPERFAMILY SSF103481 189 285 5.36E-8 T 12-10-2018 M634_21690 175a3952f3134eaf689e884c8d55448b 301 Pfam PF00892 EamA-like transporter family 6 141 7.8E-14 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M634_21690 175a3952f3134eaf689e884c8d55448b 301 Pfam PF00892 EamA-like transporter family 151 283 7.6E-7 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M634_21690 175a3952f3134eaf689e884c8d55448b 301 SUPERFAMILY SSF103481 58 143 6.54E-12 T 12-10-2018 M634_15885 75ed7b0fa3ce1962d44e75b2902963ea 488 Pfam PF04552 Sigma-54, DNA binding domain 328 486 3.8E-72 T 12-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding M634_15885 75ed7b0fa3ce1962d44e75b2902963ea 488 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 485 2.2E-157 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 M634_15885 75ed7b0fa3ce1962d44e75b2902963ea 488 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 49 5.9E-17 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 M634_15885 75ed7b0fa3ce1962d44e75b2902963ea 488 Gene3D G3DSA:1.10.10.1330 129 247 2.0E-25 T 12-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily M634_15885 75ed7b0fa3ce1962d44e75b2902963ea 488 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 466 473 - T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 M634_15885 75ed7b0fa3ce1962d44e75b2902963ea 488 PRINTS PR00045 Sigma-54 factor signature 403 414 7.6E-32 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 M634_15885 75ed7b0fa3ce1962d44e75b2902963ea 488 PRINTS PR00045 Sigma-54 factor signature 387 399 7.6E-32 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 M634_15885 75ed7b0fa3ce1962d44e75b2902963ea 488 PRINTS PR00045 Sigma-54 factor signature 199 216 7.6E-32 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 M634_15885 75ed7b0fa3ce1962d44e75b2902963ea 488 PRINTS PR00045 Sigma-54 factor signature 461 479 7.6E-32 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 M634_15885 75ed7b0fa3ce1962d44e75b2902963ea 488 Gene3D G3DSA:1.10.10.60 428 485 2.3E-23 T 12-10-2018 M634_15885 75ed7b0fa3ce1962d44e75b2902963ea 488 Pfam PF04963 Sigma-54 factor, core binding domain 127 316 5.1E-61 T 12-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 M634_15885 75ed7b0fa3ce1962d44e75b2902963ea 488 PIRSF PIRSF000774 1 488 1.2E-152 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 M634_15885 75ed7b0fa3ce1962d44e75b2902963ea 488 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 375 394 - T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 M634_17890 622e16a042e5cff1a8c5c492e7cb9c17 179 Gene3D G3DSA:3.40.33.10 19 177 1.1E-44 T 12-10-2018 IPR035940 CAP superfamily M634_17890 622e16a042e5cff1a8c5c492e7cb9c17 179 SUPERFAMILY SSF55797 42 176 5.62E-21 T 12-10-2018 IPR035940 CAP superfamily M634_17890 622e16a042e5cff1a8c5c492e7cb9c17 179 Pfam PF00188 Cysteine-rich secretory protein family 48 175 9.0E-19 T 12-10-2018 IPR014044 CAP domain M634_04955 f1fee2139b68f0fa64e0bf3401a29363 317 SUPERFAMILY SSF55186 145 296 1.79E-14 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 M634_18860 3d1c2abbb6dc9114715acb72f34e4fec 184 Pfam PF01618 MotA/TolQ/ExbB proton channel family 73 177 5.0E-22 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel M634_19705 d069c118aa2095b3146be8359a809651 241 Pfam PF00293 NUDIX domain 19 148 1.3E-8 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 M634_19705 d069c118aa2095b3146be8359a809651 241 Gene3D G3DSA:3.90.79.10 3 161 4.6E-26 T 12-10-2018 M634_19705 d069c118aa2095b3146be8359a809651 241 SUPERFAMILY SSF55811 16 159 2.84E-18 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 M634_19640 ed05f320167b513fb492fabb3006fcbd 901 SUPERFAMILY SSF48208 313 887 8.96E-28 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 M634_19640 ed05f320167b513fb492fabb3006fcbd 901 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 8 595 1.6E-85 T 12-10-2018 IPR005887 Alpha-1,2-mannosidase, putative M634_19640 ed05f320167b513fb492fabb3006fcbd 901 Pfam PF07971 Glycosyl hydrolase family 92 286 891 1.2E-141 T 12-10-2018 IPR012939 Glycosyl hydrolase family 92 M634_15305 c2c93ca3c83b26bf1f16020d8e621d53 320 Gene3D G3DSA:3.30.200.100 218 317 3.1E-28 T 12-10-2018 IPR038484 MucB/RseB, C-terminal domain superfamily M634_15305 c2c93ca3c83b26bf1f16020d8e621d53 320 Pfam PF03888 MucB/RseB N-terminal domain 26 195 2.4E-57 T 12-10-2018 IPR033434 MucB/RseB, N-terminal M634_15305 c2c93ca3c83b26bf1f16020d8e621d53 320 PIRSF PIRSF005427 1 318 1.5E-82 T 12-10-2018 IPR005588 MucB/RseB M634_15305 c2c93ca3c83b26bf1f16020d8e621d53 320 Pfam PF17188 MucB/RseB C-terminal domain 218 311 8.2E-28 T 12-10-2018 IPR033436 MucB/RseB, C-terminal M634_15305 c2c93ca3c83b26bf1f16020d8e621d53 320 Gene3D G3DSA:2.50.20.10 24 208 9.3E-51 T 12-10-2018 M634_20535 1cb7bd39d2e44206170dd668e850d1e2 115 PIRSF PIRSF028226 1 115 2.2E-57 T 12-10-2018 IPR014176 Phasin, subfamily 3 M634_20535 1cb7bd39d2e44206170dd668e850d1e2 115 TIGRFAM TIGR02809 phasin_3: phasin family protein 4 113 1.2E-55 T 12-10-2018 IPR014176 Phasin, subfamily 3 M634_20535 1cb7bd39d2e44206170dd668e850d1e2 115 Pfam PF09361 Phasin protein 8 108 9.8E-21 T 12-10-2018 IPR018968 Phasin M634_21620 99a30d0c504ed106d04758e7e66ea1ad 299 Gene3D G3DSA:3.40.190.10 79 286 3.2E-25 T 12-10-2018 M634_21620 99a30d0c504ed106d04758e7e66ea1ad 299 SUPERFAMILY SSF53850 79 289 1.99E-23 T 12-10-2018 M634_21620 99a30d0c504ed106d04758e7e66ea1ad 299 Pfam PF03466 LysR substrate binding domain 87 289 3.7E-14 T 12-10-2018 IPR005119 LysR, substrate-binding M634_21620 99a30d0c504ed106d04758e7e66ea1ad 299 Gene3D G3DSA:3.40.190.10 160 264 3.2E-25 T 12-10-2018 M634_07875 3cff73318994e4131ccb0bab7605f512 203 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 89 - T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 M634_07875 3cff73318994e4131ccb0bab7605f512 203 Gene3D G3DSA:1.20.120.1760 3 199 1.2E-19 T 12-10-2018 M634_07875 3cff73318994e4131ccb0bab7605f512 203 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 89 3.4E-9 T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 M634_06445 055aece7a3c5ba9c1fa6b1e473c4dc49 206 SUPERFAMILY SSF89392 27 192 3.45E-20 T 12-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX M634_06445 055aece7a3c5ba9c1fa6b1e473c4dc49 206 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 39 192 6.7E-12 T 12-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like M634_06445 055aece7a3c5ba9c1fa6b1e473c4dc49 206 Gene3D G3DSA:2.50.20.10 26 206 1.9E-25 T 12-10-2018 M634_20865 f243ccbbedd5f9ee2b43b9d47d75b1a0 42 Pfam PF10617 Protein of unknown function (DUF2474) 4 42 1.3E-18 T 12-10-2018 IPR018895 Protein of unknown function DUF2474 M634_14110 ee5fee26a6b30fea8604031a92ee8701 77 Pfam PF04400 (Na+)-NQR maturation NqrM 22 63 1.7E-21 T 12-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM M634_10030 46b979d13437bd50ffd91abfe360fe65 397 Pfam PF13641 Glycosyltransferase like family 2 59 279 2.0E-19 T 12-10-2018 M634_10030 46b979d13437bd50ffd91abfe360fe65 397 SUPERFAMILY SSF53448 49 327 2.25E-34 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M634_10030 46b979d13437bd50ffd91abfe360fe65 397 Gene3D G3DSA:3.90.550.10 49 264 1.0E-23 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M634_15555 10319446766a2c160e097d6858847d6a 379 Pfam PF11873 Domain of unknown function (DUF3393) 3 205 1.3E-79 T 12-10-2018 IPR024570 Murein transglycosylase-C, N-terminal M634_15555 10319446766a2c160e097d6858847d6a 379 Pfam PF01464 Transglycosylase SLT domain 211 332 3.9E-28 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 M634_15555 10319446766a2c160e097d6858847d6a 379 SUPERFAMILY SSF53955 188 371 2.34E-36 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily M634_15555 10319446766a2c160e097d6858847d6a 379 Gene3D G3DSA:1.10.530.10 190 371 2.0E-49 T 12-10-2018 M634_15555 10319446766a2c160e097d6858847d6a 379 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 228 256 - T 12-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 M634_10495 759e4c73e2d0d0c061a42ae956b54c47 451 Pfam PF04632 Fusaric acid resistance protein family 9 233 2.7E-30 T 12-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 M634_11040 4306abb7acc4b826a13b6d5887a71322 73 Pfam PF09905 DNA-binding protein VF530 6 68 8.4E-35 T 12-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 M634_11040 4306abb7acc4b826a13b6d5887a71322 73 Gene3D G3DSA:1.10.720.30 14 72 3.5E-30 T 12-10-2018 IPR036361 SAP domain superfamily M634_01555 0d3c64a089576d693ccd5aad6b16d982 222 Pfam PF02592 Putative vitamin uptake transporter 43 199 7.9E-38 T 12-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 M634_01555 0d3c64a089576d693ccd5aad6b16d982 222 Hamap MF_02088 Probable queuosine precursor transporter. 7 214 15.432 T 12-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 M634_01555 0d3c64a089576d693ccd5aad6b16d982 222 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 13 204 4.2E-62 T 12-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 M634_04495 ab6afa3288c68b3f768509d6de9af831 263 Pfam PF01925 Sulfite exporter TauE/SafE 9 261 1.0E-50 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 M634_15490 f8f9fdca1fafe81f487e5f1615a7f662 346 Pfam PF00437 Type II/IV secretion system protein 12 270 1.1E-47 T 12-10-2018 IPR001482 Type II/IV secretion system protein M634_15490 f8f9fdca1fafe81f487e5f1615a7f662 346 Gene3D G3DSA:3.30.450.90 1 100 1.3E-36 T 12-10-2018 M634_15490 f8f9fdca1fafe81f487e5f1615a7f662 346 SUPERFAMILY SSF52540 5 335 4.29E-75 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_15490 f8f9fdca1fafe81f487e5f1615a7f662 346 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 333 6.1E-153 T 12-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 M634_15490 f8f9fdca1fafe81f487e5f1615a7f662 346 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 12-10-2018 IPR001482 Type II/IV secretion system protein M634_15490 f8f9fdca1fafe81f487e5f1615a7f662 346 Gene3D G3DSA:3.40.50.300 101 344 4.3E-103 T 12-10-2018 M634_13060 444866511390047f3ae9984bb5515b69 200 Pfam PF09684 Phage tail protein (Tail_P2_I) 22 108 3.4E-5 T 12-10-2018 IPR006521 Tail protein I M634_14340 3b9f49e9264c6d99a78e68d849c5cb9b 183 SUPERFAMILY SSF110857 1 123 1.03E-16 T 12-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily M634_14340 3b9f49e9264c6d99a78e68d849c5cb9b 183 Gene3D G3DSA:3.10.490.10 1 121 6.7E-9 T 12-10-2018 M634_14340 3b9f49e9264c6d99a78e68d849c5cb9b 183 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 108 1.3E-8 T 12-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like M634_17825 9b4d32c66d33b51df8a982ee2f2cafa5 333 SUPERFAMILY SSF53822 33 331 7.26E-66 T 12-10-2018 IPR028082 Periplasmic binding protein-like I M634_17825 9b4d32c66d33b51df8a982ee2f2cafa5 333 PIRSF PIRSF002816 1 333 8.8E-147 T 12-10-2018 IPR026266 L-arabinose-binding periplasmic protein GO:0042882 M634_17825 9b4d32c66d33b51df8a982ee2f2cafa5 333 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 34 326 2.1E-72 T 12-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain M634_17825 9b4d32c66d33b51df8a982ee2f2cafa5 333 Gene3D G3DSA:3.40.50.2300 34 315 1.5E-122 T 12-10-2018 M634_17825 9b4d32c66d33b51df8a982ee2f2cafa5 333 Gene3D G3DSA:3.40.50.2300 139 324 1.5E-122 T 12-10-2018 M634_14440 991bea8fa108915eaf7985dad874c357 483 Gene3D G3DSA:3.40.50.300 228 450 1.9E-69 T 12-10-2018 M634_14440 991bea8fa108915eaf7985dad874c357 483 Pfam PF00437 Type II/IV secretion system protein 132 409 1.7E-83 T 12-10-2018 IPR001482 Type II/IV secretion system protein M634_14440 991bea8fa108915eaf7985dad874c357 483 Gene3D G3DSA:3.30.450.380 15 227 2.2E-45 T 12-10-2018 M634_14440 991bea8fa108915eaf7985dad874c357 483 SUPERFAMILY SSF52540 112 453 2.25E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_21105 8cbf958b1de85ccee0e6497d93b1b524 139 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 139 33.253 T 12-10-2018 IPR023064 D-ribose pyranase GO:0016872 M634_21105 8cbf958b1de85ccee0e6497d93b1b524 139 SUPERFAMILY SSF102546 1 139 3.92E-44 T 12-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 M634_21105 8cbf958b1de85ccee0e6497d93b1b524 139 Gene3D G3DSA:3.40.1650.10 8 136 1.2E-37 T 12-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 M634_21105 8cbf958b1de85ccee0e6497d93b1b524 139 Pfam PF05025 RbsD / FucU transport protein family 1 138 1.3E-48 T 12-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 M634_12600 866192ad1c35f529ceca0a451612e3d2 321 Pfam PF04392 ABC transporter substrate binding protein 29 320 1.2E-111 T 12-10-2018 IPR007487 ABC transporter, substrate-binding protein M634_12600 866192ad1c35f529ceca0a451612e3d2 321 Gene3D G3DSA:3.40.50.2300 46 292 2.7E-101 T 12-10-2018 M634_12600 866192ad1c35f529ceca0a451612e3d2 321 Gene3D G3DSA:3.40.50.2300 143 314 2.7E-101 T 12-10-2018 M634_12600 866192ad1c35f529ceca0a451612e3d2 321 SUPERFAMILY SSF53822 43 279 2.94E-18 T 12-10-2018 IPR028082 Periplasmic binding protein-like I M634_18685 ebc2465b95d1da929f438b781090611c 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 242 1.3E-62 T 12-10-2018 M634_18685 ebc2465b95d1da929f438b781090611c 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 2.4E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_18685 ebc2465b95d1da929f438b781090611c 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 2.4E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_18685 ebc2465b95d1da929f438b781090611c 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 2.4E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_18685 ebc2465b95d1da929f438b781090611c 243 Gene3D G3DSA:3.40.50.720 1 243 1.3E-82 T 12-10-2018 M634_18685 ebc2465b95d1da929f438b781090611c 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 3.0E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_18685 ebc2465b95d1da929f438b781090611c 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 3.0E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_18685 ebc2465b95d1da929f438b781090611c 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 3.0E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_18685 ebc2465b95d1da929f438b781090611c 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.0E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_18685 ebc2465b95d1da929f438b781090611c 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 3.0E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_18685 ebc2465b95d1da929f438b781090611c 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 3.0E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_18685 ebc2465b95d1da929f438b781090611c 243 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 174 9.3E-4 T 12-10-2018 M634_18685 ebc2465b95d1da929f438b781090611c 243 SUPERFAMILY SSF51735 2 242 2.82E-81 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_04995 07af19b286828bad86626b07b3f817f5 74 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 9 57 1.3E-15 T 12-10-2018 IPR010260 DNA-binding transcriptional activator AlpA M634_04995 07af19b286828bad86626b07b3f817f5 74 SUPERFAMILY SSF46955 9 66 2.38E-7 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily M634_01350 3b290efba296fc814f83de5da7707fd9 337 Pfam PF01757 Acyltransferase family 7 326 1.2E-29 T 12-10-2018 IPR002656 Acyltransferase 3 GO:0016747 M634_18190 8322c33190d1cda2d09786c2bbe0c47f 673 Gene3D G3DSA:3.40.50.12320 174 333 2.1E-47 T 12-10-2018 M634_18190 8322c33190d1cda2d09786c2bbe0c47f 673 Gene3D G3DSA:3.40.630.30 336 540 9.2E-67 T 12-10-2018 M634_18190 8322c33190d1cda2d09786c2bbe0c47f 673 SUPERFAMILY SSF55729 373 540 4.22E-12 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_18190 8322c33190d1cda2d09786c2bbe0c47f 673 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 19 671 40.968 T 12-10-2018 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 M634_18190 8322c33190d1cda2d09786c2bbe0c47f 673 Pfam PF08351 Domain of unknown function (DUF1726) 67 115 7.0E-6 T 12-10-2018 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal Reactome: R-HSA-6790901 M634_18190 8322c33190d1cda2d09786c2bbe0c47f 673 Gene3D G3DSA:3.40.50.11040 3 165 1.8E-19 T 12-10-2018 M634_18190 8322c33190d1cda2d09786c2bbe0c47f 673 SUPERFAMILY SSF52540 153 287 9.89E-13 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_18190 8322c33190d1cda2d09786c2bbe0c47f 673 Pfam PF05127 Helicase 176 343 1.8E-58 T 12-10-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 M634_18190 8322c33190d1cda2d09786c2bbe0c47f 673 Pfam PF13718 GNAT acetyltransferase 2 378 491 1.2E-18 T 12-10-2018 IPR000182 GNAT domain M634_17025 e0804799cae5321ee68ef960441b2156 171 SUPERFAMILY SSF49329 25 170 5.63E-50 T 12-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 M634_17025 e0804799cae5321ee68ef960441b2156 171 Gene3D G3DSA:2.60.40.200 21 171 1.6E-46 T 12-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 M634_17025 e0804799cae5321ee68ef960441b2156 171 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 63 73 - T 12-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 M634_17025 e0804799cae5321ee68ef960441b2156 171 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 159 170 - T 12-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 M634_17025 e0804799cae5321ee68ef960441b2156 171 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 32 170 4.4E-31 T 12-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 M634_01385 39244b493cadc6439292df864b3b9288 205 Pfam PF01810 LysE type translocator 15 202 7.5E-35 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 M634_01385 39244b493cadc6439292df864b3b9288 205 PIRSF PIRSF006324 1 205 7.7E-56 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 M634_20930 bdb1696f7b8901fbe06871e42f49c1a3 128 SUPERFAMILY SSF46955 4 117 2.97E-26 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily M634_20930 bdb1696f7b8901fbe06871e42f49c1a3 128 Gene3D G3DSA:1.10.1660.10 1 123 9.9E-28 T 12-10-2018 M634_20930 bdb1696f7b8901fbe06871e42f49c1a3 128 Pfam PF09278 MerR, DNA binding 47 110 6.0E-17 T 12-10-2018 IPR015358 Transcription regulator MerR, DNA binding M634_20930 bdb1696f7b8901fbe06871e42f49c1a3 128 Pfam PF00376 MerR family regulatory protein 5 40 7.1E-11 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M634_20930 bdb1696f7b8901fbe06871e42f49c1a3 128 SMART SM00422 4 71 1.5E-21 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 M634_15475 482a9d8ba676136fac1dd9a1fb752ab9 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 39.395 T 12-10-2018 IPR003774 Protein of unknown function UPF0301 M634_15475 482a9d8ba676136fac1dd9a1fb752ab9 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 1.4E-50 T 12-10-2018 IPR003774 Protein of unknown function UPF0301 M634_15475 482a9d8ba676136fac1dd9a1fb752ab9 187 Gene3D G3DSA:3.40.1740.10 1 187 2.4E-69 T 12-10-2018 M634_15475 482a9d8ba676136fac1dd9a1fb752ab9 187 SUPERFAMILY SSF143456 1 187 2.09E-67 T 12-10-2018 M634_14780 b08aec168c5ec5b16e745d7d4ba21ec8 341 Pfam PF05175 Methyltransferase small domain 172 336 2.4E-61 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 M634_14780 b08aec168c5ec5b16e745d7d4ba21ec8 341 Pfam PF08468 Methyltransferase small domain N-terminal 8 163 2.1E-57 T 12-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 M634_14780 b08aec168c5ec5b16e745d7d4ba21ec8 341 Gene3D G3DSA:3.40.50.150 1 157 1.1E-49 T 12-10-2018 M634_14780 b08aec168c5ec5b16e745d7d4ba21ec8 341 Gene3D G3DSA:3.40.50.150 158 341 1.2E-41 T 12-10-2018 M634_14780 b08aec168c5ec5b16e745d7d4ba21ec8 341 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 340 46.601 T 12-10-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 M634_14780 b08aec168c5ec5b16e745d7d4ba21ec8 341 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 269 275 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 M634_14780 b08aec168c5ec5b16e745d7d4ba21ec8 341 SUPERFAMILY SSF53335 152 332 6.64E-27 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_12025 13de2619ec4466a2dab53964b665b78e 396 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 12-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 M634_12025 13de2619ec4466a2dab53964b665b78e 396 SUPERFAMILY SSF53686 5 387 2.88E-142 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme M634_12025 13de2619ec4466a2dab53964b665b78e 396 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 6 388 3.1E-195 T 12-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 M634_12025 13de2619ec4466a2dab53964b665b78e 396 Gene3D G3DSA:3.40.50.1100 9 204 5.4E-184 T 12-10-2018 M634_12025 13de2619ec4466a2dab53964b665b78e 396 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 373 1.9E-49 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme M634_12025 13de2619ec4466a2dab53964b665b78e 396 PIRSF PIRSF001413 1 395 1.5E-168 T 12-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 M634_12025 13de2619ec4466a2dab53964b665b78e 396 Gene3D G3DSA:3.40.50.1100 53 383 5.4E-184 T 12-10-2018 M634_12025 13de2619ec4466a2dab53964b665b78e 396 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 50.053 T 12-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 M634_13710 ca318126169b7d58b8fb1ff2d120471a 300 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 293 4.4E-83 T 12-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 M634_13710 ca318126169b7d58b8fb1ff2d120471a 300 Pfam PF04261 Dyp-type peroxidase family 5 293 4.4E-88 T 12-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 M634_13710 ca318126169b7d58b8fb1ff2d120471a 300 SUPERFAMILY SSF54909 1 297 3.93E-93 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel M634_24755 5e1dde32f310474936a95a1c93c38252 346 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 198 216 6.5E-28 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 M634_24755 5e1dde32f310474936a95a1c93c38252 346 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 218 235 6.5E-28 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 M634_24755 5e1dde32f310474936a95a1c93c38252 346 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 261 276 6.5E-28 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 M634_24755 5e1dde32f310474936a95a1c93c38252 346 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 8 30 6.5E-28 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 M634_24755 5e1dde32f310474936a95a1c93c38252 346 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 291 312 6.5E-28 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 M634_24755 5e1dde32f310474936a95a1c93c38252 346 SUPERFAMILY SSF160544 243 344 3.14E-22 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal M634_24755 5e1dde32f310474936a95a1c93c38252 346 Gene3D G3DSA:3.40.1690.10 208 346 3.2E-35 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal M634_24755 5e1dde32f310474936a95a1c93c38252 346 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 335 2.7E-75 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 M634_04470 4e02ba87d9e8216914ddc37f7be684e5 352 Gene3D G3DSA:3.20.20.100 9 352 8.6E-135 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily M634_04470 4e02ba87d9e8216914ddc37f7be684e5 352 Pfam PF00248 Aldo/keto reductase family 23 343 4.5E-75 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain M634_04470 4e02ba87d9e8216914ddc37f7be684e5 352 SUPERFAMILY SSF51430 9 351 2.75E-108 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily M634_05385 ccddb1d622b9078e79e90c2e187c79ae 207 Gene3D G3DSA:3.40.50.1820 13 203 5.7E-31 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_05385 ccddb1d622b9078e79e90c2e187c79ae 207 SUPERFAMILY SSF53474 6 202 7.44E-28 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_05385 ccddb1d622b9078e79e90c2e187c79ae 207 Pfam PF12697 Alpha/beta hydrolase family 15 126 3.8E-7 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 M634_17490 c7d09a3cbcf3e3909b5c2ec188e6b6e4 434 Pfam PF00375 Sodium:dicarboxylate symporter family 9 405 4.3E-130 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 M634_17490 c7d09a3cbcf3e3909b5c2ec188e6b6e4 434 Gene3D G3DSA:1.10.3860.10 1 423 1.2E-139 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 M634_17490 c7d09a3cbcf3e3909b5c2ec188e6b6e4 434 PRINTS PR00173 Glutamate-aspartate symporter signature 231 250 9.1E-52 T 12-10-2018 M634_17490 c7d09a3cbcf3e3909b5c2ec188e6b6e4 434 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 9.1E-52 T 12-10-2018 M634_17490 c7d09a3cbcf3e3909b5c2ec188e6b6e4 434 PRINTS PR00173 Glutamate-aspartate symporter signature 56 76 9.1E-52 T 12-10-2018 M634_17490 c7d09a3cbcf3e3909b5c2ec188e6b6e4 434 PRINTS PR00173 Glutamate-aspartate symporter signature 86 111 9.1E-52 T 12-10-2018 M634_17490 c7d09a3cbcf3e3909b5c2ec188e6b6e4 434 PRINTS PR00173 Glutamate-aspartate symporter signature 298 324 9.1E-52 T 12-10-2018 M634_17490 c7d09a3cbcf3e3909b5c2ec188e6b6e4 434 PRINTS PR00173 Glutamate-aspartate symporter signature 360 380 9.1E-52 T 12-10-2018 M634_17490 c7d09a3cbcf3e3909b5c2ec188e6b6e4 434 PRINTS PR00173 Glutamate-aspartate symporter signature 196 215 9.1E-52 T 12-10-2018 M634_17490 c7d09a3cbcf3e3909b5c2ec188e6b6e4 434 PRINTS PR00173 Glutamate-aspartate symporter signature 333 352 9.1E-52 T 12-10-2018 M634_17490 c7d09a3cbcf3e3909b5c2ec188e6b6e4 434 SUPERFAMILY SSF118215 9 407 9.29E-121 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 M634_15995 4ba32dd1f77bf3f3fd7433c4e9eb866a 1466 SUPERFAMILY SSF49899 487 746 2.13E-21 T 12-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily M634_15995 4ba32dd1f77bf3f3fd7433c4e9eb866a 1466 Gene3D G3DSA:2.60.120.200 489 744 9.1E-19 T 12-10-2018 M634_00705 f8d27142aa74d06966cb35a8c19a0dbe 124 Pfam PF04892 VanZ like family 33 109 9.8E-9 T 12-10-2018 IPR006976 VanZ-like M634_18605 db0c8cf4c01bb9cdd8ce5621a570689f 161 Gene3D G3DSA:3.10.180.10 1 150 1.0E-25 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M634_18605 db0c8cf4c01bb9cdd8ce5621a570689f 161 SUPERFAMILY SSF54593 1 150 9.8E-29 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M634_18605 db0c8cf4c01bb9cdd8ce5621a570689f 161 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 12-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 M634_18605 db0c8cf4c01bb9cdd8ce5621a570689f 161 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 147 6.6E-16 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain M634_04760 29d0537eedaa52203a95c399e6ff4b06 319 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 7 305 3.0E-76 T 12-10-2018 IPR011862 Phosphate binding protein GO:0042301 M634_04760 29d0537eedaa52203a95c399e6ff4b06 319 Pfam PF12849 PBP superfamily domain 34 291 2.6E-29 T 12-10-2018 IPR024370 PBP domain M634_04760 29d0537eedaa52203a95c399e6ff4b06 319 SUPERFAMILY SSF53850 38 316 4.59E-65 T 12-10-2018 M634_04760 29d0537eedaa52203a95c399e6ff4b06 319 Gene3D G3DSA:3.40.190.10 121 263 2.2E-99 T 12-10-2018 M634_04760 29d0537eedaa52203a95c399e6ff4b06 319 Gene3D G3DSA:3.40.190.10 37 307 2.2E-99 T 12-10-2018 M634_16995 311cf844ea5bb11e32046556b503ad50 181 SMART SM00972 122 178 8.2E-7 T 12-10-2018 IPR007893 Spore coat protein U M634_16995 311cf844ea5bb11e32046556b503ad50 181 Pfam PF05229 Spore Coat Protein U domain 29 178 5.6E-21 T 12-10-2018 IPR007893 Spore coat protein U M634_07815 77d8359fc4a1c707757cdc087c8d424c 283 Pfam PF03280 Proteobacterial lipase chaperone protein 85 269 2.5E-39 T 12-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 M634_07815 77d8359fc4a1c707757cdc087c8d424c 283 SUPERFAMILY SSF158855 30 280 3.92E-61 T 12-10-2018 M634_17620 47f7ae6badf60aecae7f30c382e89554 62 SMART SM00966 6 49 1.9E-5 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 M634_17620 47f7ae6badf60aecae7f30c382e89554 62 Gene3D G3DSA:2.10.260.10 2 46 5.1E-7 T 12-10-2018 M634_17620 47f7ae6badf60aecae7f30c382e89554 62 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 6 45 2.0E-8 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 M634_17620 47f7ae6badf60aecae7f30c382e89554 62 SUPERFAMILY SSF89447 1 48 3.14E-10 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily M634_17620 47f7ae6badf60aecae7f30c382e89554 62 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 6 45 1.3E-8 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 M634_08420 94d9c0fe743431fa3113cabef08e4063 457 Gene3D G3DSA:1.10.3860.10 18 456 6.6E-98 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 M634_08420 94d9c0fe743431fa3113cabef08e4063 457 Pfam PF00375 Sodium:dicarboxylate symporter family 32 441 7.4E-99 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 M634_08420 94d9c0fe743431fa3113cabef08e4063 457 PRINTS PR00173 Glutamate-aspartate symporter signature 259 278 7.8E-31 T 12-10-2018 M634_08420 94d9c0fe743431fa3113cabef08e4063 457 PRINTS PR00173 Glutamate-aspartate symporter signature 369 388 7.8E-31 T 12-10-2018 M634_08420 94d9c0fe743431fa3113cabef08e4063 457 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 7.8E-31 T 12-10-2018 M634_08420 94d9c0fe743431fa3113cabef08e4063 457 PRINTS PR00173 Glutamate-aspartate symporter signature 396 416 7.8E-31 T 12-10-2018 M634_08420 94d9c0fe743431fa3113cabef08e4063 457 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 7.8E-31 T 12-10-2018 M634_08420 94d9c0fe743431fa3113cabef08e4063 457 PRINTS PR00173 Glutamate-aspartate symporter signature 181 203 7.8E-31 T 12-10-2018 M634_08420 94d9c0fe743431fa3113cabef08e4063 457 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 7.8E-31 T 12-10-2018 M634_08420 94d9c0fe743431fa3113cabef08e4063 457 SUPERFAMILY SSF118215 29 441 1.7E-91 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 M634_02565 47b69980f004c7fecddeb9c1c8820f89 162 Pfam PF10675 Protein of unknown function (DUF2489) 14 145 1.9E-44 T 12-10-2018 IPR019617 Domain of unknown function DUF2489 M634_16005 b6b584312f620721a47fb2882e33b5a3 237 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 25 2.6E-6 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M634_16005 b6b584312f620721a47fb2882e33b5a3 237 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 1.6E-5 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site M634_22285 19ad3399a204da224cd07116336e3c32 77 Pfam PF11869 Protein of unknown function (DUF3389) 1 76 4.7E-34 T 12-10-2018 IPR021811 Protein of unknown function DUF3389 M634_08610 4b12418a2694535ff27e50da27d6dd03 598 SUPERFAMILY SSF53092 14 139 1.06E-12 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal M634_08610 4b12418a2694535ff27e50da27d6dd03 598 Pfam PF01321 Creatinase/Prolidase N-terminal domain 10 136 8.2E-21 T 12-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 M634_08610 4b12418a2694535ff27e50da27d6dd03 598 Pfam PF00557 Metallopeptidase family M24 325 526 5.8E-42 T 12-10-2018 IPR000994 Peptidase M24 M634_08610 4b12418a2694535ff27e50da27d6dd03 598 Gene3D G3DSA:3.40.350.10 1 151 2.2E-46 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal M634_08610 4b12418a2694535ff27e50da27d6dd03 598 Gene3D G3DSA:3.40.350.10 152 299 4.7E-37 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal M634_08610 4b12418a2694535ff27e50da27d6dd03 598 SUPERFAMILY SSF55920 308 562 9.55E-50 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like M634_08610 4b12418a2694535ff27e50da27d6dd03 598 SUPERFAMILY SSF53092 164 237 7.67E-5 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal M634_08610 4b12418a2694535ff27e50da27d6dd03 598 Pfam PF16189 Creatinase/Prolidase N-terminal domain 153 311 1.3E-39 T 12-10-2018 M634_08610 4b12418a2694535ff27e50da27d6dd03 598 Pfam PF16188 C-terminal region of peptidase_M24 537 594 7.9E-23 T 12-10-2018 IPR032416 Peptidase M24, C-terminal domain M634_08610 4b12418a2694535ff27e50da27d6dd03 598 Gene3D G3DSA:3.90.230.10 305 596 7.9E-93 T 12-10-2018 M634_13125 e50bce4a5ce8658d947aff89452d15a1 164 Pfam PF06891 P2 phage tail completion protein R (GpR) 9 143 8.3E-28 T 12-10-2018 IPR009678 Bacteriophage tail completion protein R M634_13250 d3d7925cb235c99d6892ccb724b5f5f4 82 Pfam PF04226 Transglycosylase associated protein 33 81 4.9E-13 T 12-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 M634_20390 1a58c3655808daf6ca39dd4db3babe6c 204 PIRSF PIRSF006324 1 204 1.2E-41 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 M634_20390 1a58c3655808daf6ca39dd4db3babe6c 204 Pfam PF01810 LysE type translocator 15 202 2.5E-32 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 M634_08235 8e016047ad19431bfdf668f825439073 222 Gene3D G3DSA:3.30.1330.60 80 222 2.7E-44 T 12-10-2018 IPR036737 OmpA-like domain superfamily M634_08235 8e016047ad19431bfdf668f825439073 222 Pfam PF13488 Glycine zipper 38 86 6.1E-11 T 12-10-2018 IPR039567 Glycine zipper domain M634_08235 8e016047ad19431bfdf668f825439073 222 Pfam PF00691 OmpA family 118 212 3.2E-23 T 12-10-2018 IPR006665 OmpA-like domain M634_08235 8e016047ad19431bfdf668f825439073 222 SUPERFAMILY SSF103088 106 221 4.71E-37 T 12-10-2018 IPR036737 OmpA-like domain superfamily M634_08235 8e016047ad19431bfdf668f825439073 222 PRINTS PR01021 OMPA domain signature 118 140 5.0E-12 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M634_08235 8e016047ad19431bfdf668f825439073 222 PRINTS PR01021 OMPA domain signature 148 163 5.0E-12 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M634_08235 8e016047ad19431bfdf668f825439073 222 PRINTS PR01021 OMPA domain signature 163 179 5.0E-12 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 M634_08235 8e016047ad19431bfdf668f825439073 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 201 221 8.9E-7 T 12-10-2018 M634_08235 8e016047ad19431bfdf668f825439073 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 163 180 8.9E-7 T 12-10-2018 M634_08235 8e016047ad19431bfdf668f825439073 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 181 200 8.9E-7 T 12-10-2018 M634_01795 2f4ede850c130cb6b20a5fd81129ace0 417 Gene3D G3DSA:3.40.640.10 1 415 7.4E-150 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 M634_01795 2f4ede850c130cb6b20a5fd81129ace0 417 SUPERFAMILY SSF53383 13 411 1.34E-61 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase M634_01795 2f4ede850c130cb6b20a5fd81129ace0 417 Pfam PF00155 Aminotransferase class I and II 67 401 3.9E-27 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 M634_14220 725621ad575424b49b024cdec513cb3a 142 Pfam PF02657 Fe-S metabolism associated domain 21 139 5.0E-47 T 12-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like M634_14220 725621ad575424b49b024cdec513cb3a 142 SUPERFAMILY SSF82649 4 141 3.66E-50 T 12-10-2018 M634_14220 725621ad575424b49b024cdec513cb3a 142 Gene3D G3DSA:3.90.1010.10 1 142 3.6E-52 T 12-10-2018 M634_14220 725621ad575424b49b024cdec513cb3a 142 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 7 141 2.7E-48 T 12-10-2018 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE M634_21065 6477c3e6d4c62569ace10243126850fa 172 Pfam PF13590 Domain of unknown function (DUF4136) 20 169 9.1E-26 T 12-10-2018 IPR025411 Domain of unknown function DUF4136 M634_21065 6477c3e6d4c62569ace10243126850fa 172 Gene3D G3DSA:3.30.160.670 13 171 6.8E-25 T 12-10-2018 M634_08240 d4557b6e321b905dc0a84f43d0686a9a 231 Pfam PF10979 Protein of unknown function (DUF2786) 5 42 2.8E-12 T 12-10-2018 IPR024498 Domain of unknown function DUF2786 M634_08240 d4557b6e321b905dc0a84f43d0686a9a 231 PIRSF PIRSF028111 1 230 1.0E-84 T 12-10-2018 IPR016868 Bacteriophage B3, Orf5 M634_08040 5d7b7723749ab31bb6a4dd287463134b 836 Pfam PF02687 FtsX-like permease family 734 828 7.4E-8 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 M634_08040 5d7b7723749ab31bb6a4dd287463134b 836 Pfam PF12704 MacB-like periplasmic core domain 484 676 5.4E-7 T 12-10-2018 IPR025857 MacB-like periplasmic core domain M634_10320 fd8cf83fc0fd11eec26552a7e9fd3c56 119 Pfam PF04237 YjbR 15 104 4.4E-26 T 12-10-2018 IPR007351 Uncharacterised protein YjbR M634_10320 fd8cf83fc0fd11eec26552a7e9fd3c56 119 Gene3D G3DSA:3.90.1150.30 3 119 5.4E-43 T 12-10-2018 IPR038056 YjbR-like superfamily M634_10320 fd8cf83fc0fd11eec26552a7e9fd3c56 119 SUPERFAMILY SSF142906 3 117 2.35E-39 T 12-10-2018 IPR038056 YjbR-like superfamily M634_09020 dc9a67594531919f8688963a90a52c63 69 TIGRFAM TIGR02501 type_III_yscE: type III secretion system protein, YseE family 1 63 1.8E-10 T 12-10-2018 IPR012671 Type III secretion system, secretion protein E GO:0009405 M634_09020 dc9a67594531919f8688963a90a52c63 69 Gene3D G3DSA:1.20.5.420 1 66 8.7E-8 T 12-10-2018 M634_09020 dc9a67594531919f8688963a90a52c63 69 Pfam PF08988 Type III secretion system, cytoplasmic E component of needle 1 62 1.3E-10 T 12-10-2018 IPR012671 Type III secretion system, secretion protein E GO:0009405 M634_09160 e35423b2f0e796785c9faa642cc6e2ed 137 Pfam PF09621 Type III secretion system regulator (LcrR) 2 137 2.1E-63 T 12-10-2018 IPR022797 Type III secretion system regulator LcrR/Chaperone CesD2 M634_09160 e35423b2f0e796785c9faa642cc6e2ed 137 TIGRFAM TIGR02572 LcrR: type III secretion system regulator LcrR 1 137 4.0E-66 T 12-10-2018 IPR013405 Type III secretion system regulator, LcrR M634_13585 56621eec9c20725334f08bef98541dc3 260 Pfam PF01311 Bacterial export proteins, family 1 13 243 7.4E-56 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 M634_13585 56621eec9c20725334f08bef98541dc3 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 7.9E-16 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 M634_13585 56621eec9c20725334f08bef98541dc3 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 7.9E-16 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 M634_13585 56621eec9c20725334f08bef98541dc3 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 7.9E-16 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 M634_13585 56621eec9c20725334f08bef98541dc3 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 7.9E-16 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 M634_13585 56621eec9c20725334f08bef98541dc3 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 12 256 4.3E-74 T 12-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 M634_19220 7dca8de30122d7cb20e628f67ccfd1cf 50 PIRSF PIRSF037205 1 50 1.0E-26 T 12-10-2018 IPR017136 Uncharacterised conserved protein UCP037205 M634_19220 7dca8de30122d7cb20e628f67ccfd1cf 50 Pfam PF10013 Uncharacterized protein conserved in bacteria (DUF2256) 6 43 7.6E-23 T 12-10-2018 IPR017136 Uncharacterised conserved protein UCP037205 M634_00255 c2266f393dd81e0db1cf5f33d8eb1009 90 Pfam PF12292 Protein of unknown function (DUF3624) 1 79 4.3E-37 T 12-10-2018 IPR022072 Protein of unknown function DUF3624 M634_09095 997043b5955f4719925c13598e103b9c 261 TIGRFAM TIGR01401 fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT 5 242 2.3E-78 T 12-10-2018 IPR006304 Type III secretion protein SpaR/YscT GO:0016021 M634_09095 997043b5955f4719925c13598e103b9c 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 182 204 5.2E-30 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 M634_09095 997043b5955f4719925c13598e103b9c 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 5.2E-30 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 M634_09095 997043b5955f4719925c13598e103b9c 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 19 40 5.2E-30 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 M634_09095 997043b5955f4719925c13598e103b9c 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 204 223 5.2E-30 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 M634_09095 997043b5955f4719925c13598e103b9c 261 Pfam PF01311 Bacterial export proteins, family 1 12 246 1.9E-55 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 M634_09785 b4f4fba01c9efbdb4557a3f0a5e21985 67 TIGRFAM TIGR02811 formate_TAT: formate dehydrogenase region TAT target 2 67 6.8E-33 T 12-10-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing M634_09785 b4f4fba01c9efbdb4557a3f0a5e21985 67 PIRSF PIRSF036704 1 67 2.8E-35 T 12-10-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing M634_09785 b4f4fba01c9efbdb4557a3f0a5e21985 67 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 10 38 3.9E-4 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal M634_20225 549c16254c8d849dd386bf98b6b874cc 302 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 18 300 3.0E-65 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 M634_20225 549c16254c8d849dd386bf98b6b874cc 302 Pfam PF01545 Cation efflux family 22 230 4.9E-38 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 M634_20225 549c16254c8d849dd386bf98b6b874cc 302 SUPERFAMILY SSF161111 14 231 7.45E-53 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily M634_20225 549c16254c8d849dd386bf98b6b874cc 302 Gene3D G3DSA:1.20.1510.10 18 230 4.6E-34 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily M634_03045 214eb2547fb80afadaf242b89fbd78c0 242 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 6 179 4.4E-35 T 12-10-2018 IPR002654 Glycosyl transferase, family 25 M634_17805 71ba05765cdade363cd64d8e28a68ef3 148 Gene3D G3DSA:3.30.310.70 23 145 4.2E-14 T 12-10-2018 IPR035923 TT1751-like domain superfamily M634_17805 71ba05765cdade363cd64d8e28a68ef3 148 Pfam PF03625 Domain of unknown function DUF302 54 116 5.6E-20 T 12-10-2018 IPR005180 Domain of unknown function DUF302 M634_17805 71ba05765cdade363cd64d8e28a68ef3 148 SUPERFAMILY SSF103247 24 146 1.05E-33 T 12-10-2018 IPR035923 TT1751-like domain superfamily M634_08505 00264ba58581edf94c2ee780dca0f3a0 379 Pfam PF04230 Polysaccharide pyruvyl transferase 16 317 7.4E-27 T 12-10-2018 IPR007345 Polysaccharide pyruvyl transferase M634_05065 d266071fa3f7231e9335522055c41e83 515 Pfam PF01235 Sodium:alanine symporter family 51 472 9.5E-149 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M634_05065 d266071fa3f7231e9335522055c41e83 515 PRINTS PR00175 Sodium/alanine symporter signature 304 322 5.7E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M634_05065 d266071fa3f7231e9335522055c41e83 515 PRINTS PR00175 Sodium/alanine symporter signature 217 236 5.7E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M634_05065 d266071fa3f7231e9335522055c41e83 515 PRINTS PR00175 Sodium/alanine symporter signature 365 387 5.7E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M634_05065 d266071fa3f7231e9335522055c41e83 515 PRINTS PR00175 Sodium/alanine symporter signature 189 207 5.7E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M634_05065 d266071fa3f7231e9335522055c41e83 515 PRINTS PR00175 Sodium/alanine symporter signature 428 448 5.7E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M634_05065 d266071fa3f7231e9335522055c41e83 515 PRINTS PR00175 Sodium/alanine symporter signature 86 108 5.7E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M634_05065 d266071fa3f7231e9335522055c41e83 515 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 86 101 - T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M634_05065 d266071fa3f7231e9335522055c41e83 515 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 462 1.0E-134 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 M634_06130 4e49d39a3778e430750fa78390c80496 320 TIGRFAM TIGR00109 hemH: ferrochelatase 4 320 1.1E-106 T 12-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 M634_06130 4e49d39a3778e430750fa78390c80496 320 Pfam PF00762 Ferrochelatase 6 319 3.5E-111 T 12-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 M634_06130 4e49d39a3778e430750fa78390c80496 320 Gene3D G3DSA:3.40.50.1400 163 301 1.4E-95 T 12-10-2018 M634_06130 4e49d39a3778e430750fa78390c80496 320 Gene3D G3DSA:3.40.50.1400 8 320 1.4E-95 T 12-10-2018 M634_06130 4e49d39a3778e430750fa78390c80496 320 Hamap MF_00323 Ferrochelatase [hemH]. 5 320 38.757 T 12-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 M634_06130 4e49d39a3778e430750fa78390c80496 320 ProSitePatterns PS00534 Ferrochelatase signature. 189 207 - T 12-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 M634_06130 4e49d39a3778e430750fa78390c80496 320 SUPERFAMILY SSF53800 4 319 1.19E-106 T 12-10-2018 M634_07570 f1555e0b3ce263e2b1f956825af51d6b 374 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 7 365 1.5E-152 T 12-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 M634_07570 f1555e0b3ce263e2b1f956825af51d6b 374 Gene3D G3DSA:2.30.30.280 216 286 1.0E-24 T 12-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 M634_07570 f1555e0b3ce263e2b1f956825af51d6b 374 Gene3D G3DSA:2.40.30.10 287 372 8.6E-34 T 12-10-2018 M634_07570 f1555e0b3ce263e2b1f956825af51d6b 374 SUPERFAMILY SSF52402 5 247 1.15E-56 T 12-10-2018 M634_07570 f1555e0b3ce263e2b1f956825af51d6b 374 Pfam PF03054 tRNA methyl transferase 7 365 3.0E-142 T 12-10-2018 M634_07570 f1555e0b3ce263e2b1f956825af51d6b 374 Gene3D G3DSA:3.40.50.620 1 214 6.6E-95 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M634_07570 f1555e0b3ce263e2b1f956825af51d6b 374 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 366 39.944 T 12-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 M634_22610 6bc64b957d61b702df5624e11a2d20e4 123 Gene3D G3DSA:2.40.50.200 19 123 7.2E-16 T 12-10-2018 IPR036700 Bacterial OB-fold superfamily M634_22610 6bc64b957d61b702df5624e11a2d20e4 123 Pfam PF04076 Bacterial OB fold (BOF) protein 44 120 2.9E-9 T 12-10-2018 IPR005220 Bacterial OB-fold M634_22610 6bc64b957d61b702df5624e11a2d20e4 123 SUPERFAMILY SSF101756 23 122 1.7E-22 T 12-10-2018 IPR036700 Bacterial OB-fold superfamily M634_00985 949299f4909427106130255e379ea98e 447 PIRSF PIRSF006060 1 446 1.3E-50 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 M634_00985 949299f4909427106130255e379ea98e 447 Pfam PF13520 Amino acid permease 8 421 1.4E-36 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 M634_00985 949299f4909427106130255e379ea98e 447 Gene3D G3DSA:1.20.1740.10 1 440 4.1E-58 T 12-10-2018 M634_08030 4528158dd3ca18046d2b6fcd3b809cfb 458 Pfam PF01554 MatE 25 185 4.7E-24 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M634_08030 4528158dd3ca18046d2b6fcd3b809cfb 458 Pfam PF01554 MatE 252 413 6.1E-20 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M634_08030 4528158dd3ca18046d2b6fcd3b809cfb 458 PIRSF PIRSF006603 10 458 4.4E-67 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M634_08030 4528158dd3ca18046d2b6fcd3b809cfb 458 TIGRFAM TIGR00797 matE: MATE efflux family protein 25 423 4.3E-60 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 M634_23210 618a584ce139f7c13b0b854659f2592a 144 SUPERFAMILY SSF55729 2 140 1.43E-26 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_23210 618a584ce139f7c13b0b854659f2592a 144 Gene3D G3DSA:3.40.630.30 1 143 3.4E-31 T 12-10-2018 M634_23210 618a584ce139f7c13b0b854659f2592a 144 Pfam PF00583 Acetyltransferase (GNAT) family 24 121 1.1E-14 T 12-10-2018 IPR000182 GNAT domain M634_10715 170e833042008961e7d20e45ab8a4ff8 283 Gene3D G3DSA:3.30.420.10 118 271 3.3E-18 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M634_10715 170e833042008961e7d20e45ab8a4ff8 283 SUPERFAMILY SSF53098 115 277 4.1E-42 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M634_10715 170e833042008961e7d20e45ab8a4ff8 283 Pfam PF13276 HTH-like domain 42 96 2.1E-9 T 12-10-2018 IPR025948 HTH-like domain M634_10715 170e833042008961e7d20e45ab8a4ff8 283 Pfam PF00665 Integrase core domain 121 234 1.1E-32 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M634_17275 88f5cc2f38db9abd76be085d4e82b7d6 224 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 4 210 6.1E-44 T 12-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 M634_17275 88f5cc2f38db9abd76be085d4e82b7d6 224 Gene3D G3DSA:3.20.20.70 1 220 8.8E-77 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_17275 88f5cc2f38db9abd76be085d4e82b7d6 224 SUPERFAMILY SSF51569 3 216 5.44E-62 T 12-10-2018 M634_17275 88f5cc2f38db9abd76be085d4e82b7d6 224 ProSitePatterns PS01054 Transaldolase signature 1. 25 33 - T 12-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 M634_02485 6845434acf0af52b47fc01aeaeaad214 211 Gene3D G3DSA:3.30.1050.10 7 118 3.1E-6 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily M634_02485 6845434acf0af52b47fc01aeaeaad214 211 Pfam PF02036 SCP-2 sterol transfer family 15 111 2.1E-23 T 12-10-2018 IPR003033 SCP2 sterol-binding domain M634_02485 6845434acf0af52b47fc01aeaeaad214 211 SUPERFAMILY SSF55718 15 117 3.53E-11 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily M634_16785 3c8fe518aa162305392a067ab73adad9 188 Pfam PF07603 Protein of unknown function (DUF1566) 42 184 2.1E-21 T 12-10-2018 IPR011460 Protein of unknown function DUF1566 M634_11340 3df51bf23070cb2a80fa5b4de52bad4c 202 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 28 114 2.3E-24 T 12-10-2018 IPR014054 Bacteriophage regulatory protein, Rha family M634_11340 3df51bf23070cb2a80fa5b4de52bad4c 202 TIGRFAM TIGR02681 phage_pRha: phage regulatory protein, Rha family 22 120 1.1E-26 T 12-10-2018 IPR014054 Bacteriophage regulatory protein, Rha family M634_09870 488ce924a3f2e35155697daa9b6f47cf 249 Pfam PF03942 DTW domain 29 221 1.6E-39 T 12-10-2018 IPR005636 DTW M634_09870 488ce924a3f2e35155697daa9b6f47cf 249 SMART SM01144 27 227 4.7E-61 T 12-10-2018 IPR005636 DTW M634_04205 ba836bb858ddff8bcf7baba18e76deb8 260 Gene3D G3DSA:3.10.20.310 55 123 2.0E-24 T 12-10-2018 M634_04205 ba836bb858ddff8bcf7baba18e76deb8 260 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 23 247 22.495 T 12-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 M634_04205 ba836bb858ddff8bcf7baba18e76deb8 260 Gene3D G3DSA:3.40.50.11690 125 252 4.7E-37 T 12-10-2018 M634_04205 ba836bb858ddff8bcf7baba18e76deb8 260 Pfam PF03799 Cell division protein FtsQ 127 239 2.5E-24 T 12-10-2018 IPR005548 Cell division protein FtsQ/DivIB M634_04205 ba836bb858ddff8bcf7baba18e76deb8 260 Pfam PF08478 POTRA domain, FtsQ-type 54 123 2.8E-17 T 12-10-2018 IPR013685 POTRA domain, FtsQ-type M634_24505 f390acb57f286fc9cf804d50a4ebf2c3 402 Pfam PF00872 Transposase, Mutator family 9 377 1.5E-118 T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 M634_24505 f390acb57f286fc9cf804d50a4ebf2c3 402 ProSitePatterns PS01007 Transposases, Mutator family, signature. 232 256 - T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 M634_21385 c67fdfa1d28ccb17becc3796e69dd110 374 Pfam PF00487 Fatty acid desaturase 45 262 1.6E-20 T 12-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 M634_21385 c67fdfa1d28ccb17becc3796e69dd110 374 PRINTS PR00075 Fatty acid desaturase family 1 signature 188 209 3.4E-31 T 12-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 M634_21385 c67fdfa1d28ccb17becc3796e69dd110 374 PRINTS PR00075 Fatty acid desaturase family 1 signature 37 59 3.4E-31 T 12-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 M634_21385 c67fdfa1d28ccb17becc3796e69dd110 374 PRINTS PR00075 Fatty acid desaturase family 1 signature 231 245 3.4E-31 T 12-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 M634_21385 c67fdfa1d28ccb17becc3796e69dd110 374 PRINTS PR00075 Fatty acid desaturase family 1 signature 98 127 3.4E-31 T 12-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 M634_21385 c67fdfa1d28ccb17becc3796e69dd110 374 PRINTS PR00075 Fatty acid desaturase family 1 signature 60 80 3.4E-31 T 12-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 M634_21385 c67fdfa1d28ccb17becc3796e69dd110 374 PIRSF PIRSF000345 6 330 2.9E-99 T 12-10-2018 IPR009160 Acyl-CoA desaturase, haem/steroid binding domain-containing GO:0004768|GO:0006636|GO:0016021 MetaCyc: PWY-5987|MetaCyc: PWY-5996 M634_19550 0e86125b2842cdc22cb6b3ab2c8073a8 599 SUPERFAMILY SSF51735 399 490 4.86E-8 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_19550 0e86125b2842cdc22cb6b3ab2c8073a8 599 Pfam PF00999 Sodium/hydrogen exchanger family 16 386 1.0E-32 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 M634_19550 0e86125b2842cdc22cb6b3ab2c8073a8 599 Gene3D G3DSA:1.20.1530.20 6 388 8.5E-14 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily M634_19550 0e86125b2842cdc22cb6b3ab2c8073a8 599 Gene3D G3DSA:3.40.50.720 397 508 1.4E-9 T 12-10-2018 M634_19550 0e86125b2842cdc22cb6b3ab2c8073a8 599 Pfam PF02254 TrkA-N domain 399 489 1.8E-7 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 M634_24700 1e79d1b7af92ff033591314e1688e0fb 488 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 433 466 - T 12-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 M634_24700 1e79d1b7af92ff033591314e1688e0fb 488 PRINTS PR00811 Bacterial general secretion pathway protein D signature 196 206 3.4E-5 T 12-10-2018 IPR001775 GspD/PilQ family M634_24700 1e79d1b7af92ff033591314e1688e0fb 488 PRINTS PR00811 Bacterial general secretion pathway protein D signature 452 470 3.4E-5 T 12-10-2018 IPR001775 GspD/PilQ family M634_24700 1e79d1b7af92ff033591314e1688e0fb 488 Pfam PF00263 Bacterial type II and III secretion system protein 328 487 1.9E-26 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 M634_24700 1e79d1b7af92ff033591314e1688e0fb 488 Pfam PF03958 Bacterial type II/III secretion system short domain 199 277 8.9E-9 T 12-10-2018 IPR005644 NolW-like M634_00645 addc4f421586b9d413ebbb73e1080d9c 471 Pfam PF00939 Sodium:sulfate symporter transmembrane region 10 465 3.8E-49 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 M634_00645 addc4f421586b9d413ebbb73e1080d9c 471 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 36 467 8.5E-82 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 M634_03490 3771304e6fb05e0e6e77c7d578078dc7 419 Pfam PF02687 FtsX-like permease family 317 410 4.6E-12 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 M634_03490 3771304e6fb05e0e6e77c7d578078dc7 419 Pfam PF12704 MacB-like periplasmic core domain 20 207 2.5E-9 T 12-10-2018 IPR025857 MacB-like periplasmic core domain M634_08280 08a530a0f422fe5a87508db86e88b02a 565 TIGRFAM TIGR01228 hutU: urocanate hydratase 15 556 6.8E-292 T 12-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 M634_08280 08a530a0f422fe5a87508db86e88b02a 565 Pfam PF17392 Urocanase C-terminal domain 354 548 1.4E-91 T 12-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 M634_08280 08a530a0f422fe5a87508db86e88b02a 565 PIRSF PIRSF001423 1 563 8.3E-295 T 12-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 M634_08280 08a530a0f422fe5a87508db86e88b02a 565 ProSitePatterns PS01233 Urocanase signature. 444 459 - T 12-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 M634_08280 08a530a0f422fe5a87508db86e88b02a 565 Gene3D G3DSA:3.40.50.10730 147 351 3.7E-258 T 12-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 M634_08280 08a530a0f422fe5a87508db86e88b02a 565 Pfam PF17391 Urocanase N-terminal domain 17 143 9.3E-63 T 12-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 M634_08280 08a530a0f422fe5a87508db86e88b02a 565 Pfam PF01175 Urocanase Rossmann-like domain 146 351 2.5E-84 T 12-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 M634_08280 08a530a0f422fe5a87508db86e88b02a 565 Gene3D G3DSA:3.40.1770.10 22 544 3.7E-258 T 12-10-2018 M634_08280 08a530a0f422fe5a87508db86e88b02a 565 SUPERFAMILY SSF111326 11 557 1.07E-259 T 12-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 M634_08280 08a530a0f422fe5a87508db86e88b02a 565 Hamap MF_00577 Urocanate hydratase [hutU]. 2 558 49.362 T 12-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 M634_22750 eeee529eea74b8d9b3623f89c6fcb09e 441 Pfam PF07394 Protein of unknown function (DUF1501) 36 421 1.5E-67 T 12-10-2018 IPR010869 Protein of unknown function DUF1501 M634_19460 ca963d0b0f12d38ddb3a42ab41cfe6f7 172 Pfam PF00293 NUDIX domain 23 145 2.1E-16 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 M634_19460 ca963d0b0f12d38ddb3a42ab41cfe6f7 172 ProSitePatterns PS00893 Nudix box signature. 52 73 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 M634_19460 ca963d0b0f12d38ddb3a42ab41cfe6f7 172 SUPERFAMILY SSF55811 23 142 2.57E-21 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 M634_19460 ca963d0b0f12d38ddb3a42ab41cfe6f7 172 Gene3D G3DSA:3.90.79.10 14 151 3.6E-26 T 12-10-2018 M634_18970 f6b384a7b3c7ba17a2bed6ffb0d9d553 296 SUPERFAMILY SSF46785 2 111 5.2E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily M634_18970 f6b384a7b3c7ba17a2bed6ffb0d9d553 296 Gene3D G3DSA:1.10.10.10 5 69 2.5E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_18970 f6b384a7b3c7ba17a2bed6ffb0d9d553 296 Gene3D G3DSA:3.40.190.10 91 280 1.1E-15 T 12-10-2018 M634_18970 f6b384a7b3c7ba17a2bed6ffb0d9d553 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 4.2E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_18970 f6b384a7b3c7ba17a2bed6ffb0d9d553 296 SUPERFAMILY SSF53850 88 291 1.79E-28 T 12-10-2018 M634_18970 f6b384a7b3c7ba17a2bed6ffb0d9d553 296 Pfam PF03466 LysR substrate binding domain 89 284 1.2E-26 T 12-10-2018 IPR005119 LysR, substrate-binding M634_18970 f6b384a7b3c7ba17a2bed6ffb0d9d553 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.3E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_18970 f6b384a7b3c7ba17a2bed6ffb0d9d553 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.3E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_18970 f6b384a7b3c7ba17a2bed6ffb0d9d553 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.3E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 M634_18970 f6b384a7b3c7ba17a2bed6ffb0d9d553 296 Gene3D G3DSA:3.40.190.10 163 268 1.1E-15 T 12-10-2018 M634_15960 acae1ae0d076d30cce684588d0835aa6 273 Gene3D G3DSA:3.60.110.10 1 268 5.3E-90 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily M634_15960 acae1ae0d076d30cce684588d0835aa6 273 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 149 169 - T 12-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site M634_15960 acae1ae0d076d30cce684588d0835aa6 273 Pfam PF00795 Carbon-nitrogen hydrolase 3 256 3.2E-55 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 M634_15960 acae1ae0d076d30cce684588d0835aa6 273 SUPERFAMILY SSF56317 3 263 2.49E-80 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily M634_16400 fee90c9881494758032406422f4848b4 399 Pfam PF06527 TniQ 9 161 7.6E-19 T 12-10-2018 IPR009492 TniQ M634_13915 3db2c0234a49bb797b02049d14189feb 211 Gene3D G3DSA:3.30.420.10 4 211 3.8E-80 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M634_13915 3db2c0234a49bb797b02049d14189feb 211 SUPERFAMILY SSF53098 19 209 1.44E-71 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M634_13915 3db2c0234a49bb797b02049d14189feb 211 Pfam PF01351 Ribonuclease HII 27 203 8.5E-39 T 12-10-2018 IPR024567 Ribonuclease HII/HIII domain M634_13915 3db2c0234a49bb797b02049d14189feb 211 Hamap MF_00052_B Ribonuclease HII [rnhB]. 25 204 38.261 T 12-10-2018 IPR022898 Ribonuclease HII GO:0004523 M634_08790 b1b9f0f33d7808608e3a7e4b4ec2e81c 255 Pfam PF03741 Integral membrane protein TerC family 16 203 6.7E-44 T 12-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 M634_03030 9f0d55ff3dc6e3f1bf32af2a5eecd16b 314 Gene3D G3DSA:3.90.550.10 8 260 3.5E-26 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M634_03030 9f0d55ff3dc6e3f1bf32af2a5eecd16b 314 SUPERFAMILY SSF53448 10 212 2.48E-25 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M634_03030 9f0d55ff3dc6e3f1bf32af2a5eecd16b 314 Pfam PF00535 Glycosyl transferase family 2 10 140 5.4E-13 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 M634_06435 e92733b77d9276add8e41ff14a5e702d 203 Pfam PF11659 Protein of unknown function (DUF3261) 55 198 7.7E-32 T 12-10-2018 IPR021675 Protein of unknown function DUF3261 M634_18820 5574b6e810aa7cd5c274e466d1013754 165 Gene3D G3DSA:2.40.440.10 19 165 4.6E-18 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like M634_18820 5574b6e810aa7cd5c274e466d1013754 165 Pfam PF03734 L,D-transpeptidase catalytic domain 29 163 2.5E-19 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 M634_18820 5574b6e810aa7cd5c274e466d1013754 165 SUPERFAMILY SSF141523 29 163 1.96E-24 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like M634_07735 8edbbf50f9f49759270dbf023a825190 404 Pfam PF11449 Putative, 10TM heavy-metal exporter 40 402 2.5E-165 T 12-10-2018 IPR021552 Putative, 10TM heavy-metal exporter M634_11825 40cb01282a66f9652c7be9a94dcfe6b1 136 TIGRFAM TIGR03147 cyt_nit_nrfF: cytochrome c nitrite reductase, accessory protein NrfF 26 135 1.0E-48 T 12-10-2018 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF M634_11825 40cb01282a66f9652c7be9a94dcfe6b1 136 Gene3D G3DSA:1.10.8.640 28 113 8.9E-33 T 12-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily M634_11825 40cb01282a66f9652c7be9a94dcfe6b1 136 Pfam PF03918 Cytochrome C biogenesis protein 28 135 1.2E-41 T 12-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family M634_20245 2e184b7f07c124fd51a95835a1f9e323 404 Pfam PF07690 Major Facilitator Superfamily 16 357 5.4E-38 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M634_20245 2e184b7f07c124fd51a95835a1f9e323 404 SUPERFAMILY SSF103473 10 395 3.92E-57 T 12-10-2018 IPR036259 MFS transporter superfamily M634_20245 2e184b7f07c124fd51a95835a1f9e323 404 Gene3D G3DSA:1.20.1250.20 7 394 3.5E-51 T 12-10-2018 M634_19320 928d59a03c8b7aa0da943d51bd3597fe 418 Pfam PF03611 PTS system sugar-specific permease component 11 405 7.2E-145 T 12-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 M634_24400 b89ed1b08101e64777458624f69fa5b6 177 Gene3D G3DSA:3.40.50.620 1 177 4.3E-46 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold M634_24400 b89ed1b08101e64777458624f69fa5b6 177 Pfam PF01467 Cytidylyltransferase-like 6 144 1.3E-6 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 M634_24400 b89ed1b08101e64777458624f69fa5b6 177 SUPERFAMILY SSF52374 1 171 3.07E-27 T 12-10-2018 M634_23645 fbeab15fb01d7c888eadf4a732cd8cb2 589 Gene3D G3DSA:2.130.10.10 52 303 1.9E-9 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 M634_23645 fbeab15fb01d7c888eadf4a732cd8cb2 589 SUPERFAMILY SSF75011 144 517 3.53E-15 T 12-10-2018 M634_14300 2b0e103ca4c77eb59ffa40e3b6d6d22f 351 Gene3D G3DSA:3.20.20.190 21 350 5.5E-124 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 M634_14300 2b0e103ca4c77eb59ffa40e3b6d6d22f 351 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 28 344 3.9E-64 T 12-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 M634_14300 2b0e103ca4c77eb59ffa40e3b6d6d22f 351 SUPERFAMILY SSF51695 22 349 1.81E-90 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 M634_04555 bbaaf692ba62ad3f9d8a4da4cdcf693c 152 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 12 148 2.9E-13 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain M634_04555 bbaaf692ba62ad3f9d8a4da4cdcf693c 152 Gene3D G3DSA:2.40.10.330 81 137 1.3E-42 T 12-10-2018 M634_04555 bbaaf692ba62ad3f9d8a4da4cdcf693c 152 SUPERFAMILY SSF54534 13 151 9.43E-37 T 12-10-2018 M634_04555 bbaaf692ba62ad3f9d8a4da4cdcf693c 152 Gene3D G3DSA:3.10.50.40 22 149 1.3E-42 T 12-10-2018 M634_07785 655bb8128e16ed0c3d0911f8b5737918 77 Pfam PF06667 Phage shock protein B 4 74 9.9E-32 T 12-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 M634_07785 655bb8128e16ed0c3d0911f8b5737918 77 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 75 4.1E-35 T 12-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 M634_04005 a15cd5ea85fe881c35f30392eb122d80 419 Pfam PF01384 Phosphate transporter family 26 407 1.7E-112 T 12-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 M634_19540 fec552816bb6d4a6e60f7edbde90bfe2 346 SUPERFAMILY SSF64518 61 312 1.57E-6 T 12-10-2018 M634_12595 c172ec8286c9b2011d481458a87f43bd 311 Pfam PF02653 Branched-chain amino acid transport system / permease component 7 265 1.5E-25 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 M634_00420 d3518e5e5b170e4370860c3389348574 335 Pfam PF00561 alpha/beta hydrolase fold 61 301 3.1E-19 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 M634_00420 d3518e5e5b170e4370860c3389348574 335 Gene3D G3DSA:3.40.50.1820 34 312 6.4E-26 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_00420 d3518e5e5b170e4370860c3389348574 335 PIRSF PIRSF005211 1 334 2.5E-105 T 12-10-2018 IPR012020 AB hydrolase 4 family M634_00420 d3518e5e5b170e4370860c3389348574 335 SUPERFAMILY SSF53474 32 299 2.41E-39 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_00420 d3518e5e5b170e4370860c3389348574 335 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 227 268 - T 12-10-2018 IPR000952 AB hydrolase 4, conserved site M634_09550 c68fb755ceab56b85d5739b337cab12c 119 Pfam PF06950 Protein of unknown function (DUF1293) 1 115 3.4E-74 T 12-10-2018 IPR009712 Vibrio phage Vf33, Vpf117 M634_13465 8268b5a6d3415eb9c1fd840338075d2b 439 Gene3D G3DSA:2.40.160.60 26 439 6.1E-124 T 12-10-2018 M634_13465 8268b5a6d3415eb9c1fd840338075d2b 439 SUPERFAMILY SSF56935 26 439 4.27E-101 T 12-10-2018 M634_13465 8268b5a6d3415eb9c1fd840338075d2b 439 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 19 439 1.1E-129 T 12-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) M634_03010 3c6990256b8b212afae4f490ac9a2bfb 142 Pfam PF05523 WxcM-like, C-terminal 4 132 3.7E-51 T 12-10-2018 IPR008894 WxcM-like, C-terminal KEGG: 00523+5.3.2.3|MetaCyc: PWY-6953|MetaCyc: PWY-7688 M634_03010 3c6990256b8b212afae4f490ac9a2bfb 142 Gene3D G3DSA:2.60.120.10 1 141 9.2E-52 T 12-10-2018 IPR014710 RmlC-like jelly roll fold M634_03010 3c6990256b8b212afae4f490ac9a2bfb 142 SUPERFAMILY SSF51182 5 130 2.11E-42 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily M634_22295 aa5e924ec361a5cd80a48fde906bcf5b 110 SUPERFAMILY SSF54913 4 106 1.15E-33 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta M634_22295 aa5e924ec361a5cd80a48fde906bcf5b 110 Gene3D G3DSA:3.30.70.120 1 108 4.4E-36 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal M634_22295 aa5e924ec361a5cd80a48fde906bcf5b 110 Pfam PF03091 CutA1 divalent ion tolerance protein 8 104 5.9E-33 T 12-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 M634_14610 65b61a5759c066526d59ae5cd070d75d 337 Pfam PF01136 Peptidase family U32 75 336 2.8E-68 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 M634_14610 65b61a5759c066526d59ae5cd070d75d 337 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 M634_15815 5ac54a5a25634668ef0ba7ba95ce8563 129 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 127 1.2E-53 T 12-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 M634_15815 5ac54a5a25634668ef0ba7ba95ce8563 129 Pfam PF01042 Endoribonuclease L-PSP 8 127 2.7E-45 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 M634_15815 5ac54a5a25634668ef0ba7ba95ce8563 129 SUPERFAMILY SSF55298 2 128 3.46E-44 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 M634_15815 5ac54a5a25634668ef0ba7ba95ce8563 129 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 104 122 - T 12-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 M634_15815 5ac54a5a25634668ef0ba7ba95ce8563 129 Gene3D G3DSA:3.30.1330.40 2 129 5.4E-48 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 M634_06780 b5f00cc08e6763c983f26c33f415e1a8 144 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 34 136 1.3E-43 T 12-10-2018 IPR039366 YscW/ExsB M634_18200 c33fb4e702871383b136e2c3c1e5f113 430 Gene3D G3DSA:1.10.1660.30 61 127 8.8E-6 T 12-10-2018 M634_18200 c33fb4e702871383b136e2c3c1e5f113 430 SUPERFAMILY SSF52540 133 392 1.91E-32 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_18200 c33fb4e702871383b136e2c3c1e5f113 430 Pfam PF13614 AAA domain 135 320 1.5E-22 T 12-10-2018 IPR025669 AAA domain M634_18200 c33fb4e702871383b136e2c3c1e5f113 430 Gene3D G3DSA:3.40.50.300 132 422 3.0E-56 T 12-10-2018 M634_06755 89c06f2bad6c57acfa9424dff5db7f92 119 Gene3D G3DSA:1.10.3340.10 18 119 3.4E-45 T 12-10-2018 IPR036810 SMc04008-like superfamily M634_06755 89c06f2bad6c57acfa9424dff5db7f92 119 Pfam PF06844 Protein of unknown function (DUF1244) 49 115 5.3E-35 T 12-10-2018 IPR023163 SMc04008-like domain M634_06755 89c06f2bad6c57acfa9424dff5db7f92 119 SUPERFAMILY SSF158757 22 99 7.19E-36 T 12-10-2018 IPR036810 SMc04008-like superfamily M634_22150 8e3c73e7b50a7440681bde26469fcf98 169 Gene3D G3DSA:3.40.630.30 3 147 6.9E-6 T 12-10-2018 M634_13385 ad074658f3fcfd2e81690e849c769126 87 Pfam PF08891 YfcL protein 4 84 5.4E-33 T 12-10-2018 IPR014987 Uncharacterised protein family YfcL M634_24495 2eabc7489dc93beef59359c72e8b9777 183 SUPERFAMILY SSF53098 61 174 5.46E-19 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M634_24495 2eabc7489dc93beef59359c72e8b9777 183 Gene3D G3DSA:3.30.420.10 63 179 2.4E-10 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M634_24495 2eabc7489dc93beef59359c72e8b9777 183 Pfam PF00665 Integrase core domain 64 174 2.5E-15 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M634_09640 18f026c88365322d3ea62d86d65162d7 278 Gene3D G3DSA:1.10.530.10 134 275 3.3E-15 T 12-10-2018 M634_09640 18f026c88365322d3ea62d86d65162d7 278 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 136 273 5.6E-18 T 12-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 M634_21965 b03bb4146a99351dee2f6540e4204d30 164 Pfam PF14317 YcxB-like protein 99 154 7.8E-7 T 12-10-2018 IPR025588 YcxB-like protein M634_08220 b65f023d75220261032832b51819bb19 130 Pfam PF03846 Cell division inhibitor SulA 17 96 4.3E-7 T 12-10-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 M634_08220 b65f023d75220261032832b51819bb19 130 SUPERFAMILY SSF52540 22 97 3.56E-6 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_08220 b65f023d75220261032832b51819bb19 130 Gene3D G3DSA:3.40.50.300 15 123 3.5E-10 T 12-10-2018 M634_10815 0883ef0d842be4d4bd7eade16b57ef51 164 SUPERFAMILY SSF55729 1 152 2.02E-14 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_10815 0883ef0d842be4d4bd7eade16b57ef51 164 Gene3D G3DSA:3.40.630.30 17 142 1.6E-15 T 12-10-2018 M634_10815 0883ef0d842be4d4bd7eade16b57ef51 164 Pfam PF13302 Acetyltransferase (GNAT) domain 64 142 6.4E-8 T 12-10-2018 IPR000182 GNAT domain M634_24230 0a5a84c909fe714a211cb025ee268d4a 76 Pfam PF09016 Pas factor saposin fold 1 76 1.5E-45 T 12-10-2018 IPR015106 Pas factor saposin domain M634_24230 0a5a84c909fe714a211cb025ee268d4a 76 Gene3D G3DSA:1.20.1280.100 1 73 1.5E-39 T 12-10-2018 M634_18995 76d3c9aa4459653aff4e34610cb247f2 112 Pfam PF04320 Protein with unknown function (DUF469) 11 111 7.5E-33 T 12-10-2018 IPR007416 Protein of unknown function DUF469 M634_17510 5f2856a28e3d41a3dbfa34692d9d093f 124 Pfam PF06803 Protein of unknown function (DUF1232) 63 98 7.2E-14 T 12-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 M634_17510 5f2856a28e3d41a3dbfa34692d9d093f 124 PIRSF PIRSF031804 1 124 1.9E-41 T 12-10-2018 IPR016983 Uncharacterised conserved protein UCP031804 M634_07885 6267031ef59b57a153acfcee8cc0de49 569 SUPERFAMILY SSF161098 301 541 3.27E-25 T 12-10-2018 IPR035906 MetI-like superfamily M634_07885 6267031ef59b57a153acfcee8cc0de49 569 Gene3D G3DSA:1.10.3720.10 297 549 1.5E-19 T 12-10-2018 IPR035906 MetI-like superfamily M634_07885 6267031ef59b57a153acfcee8cc0de49 569 Gene3D G3DSA:1.10.3720.10 3 279 1.6E-18 T 12-10-2018 IPR035906 MetI-like superfamily M634_07885 6267031ef59b57a153acfcee8cc0de49 569 SUPERFAMILY SSF161098 5 276 5.01E-24 T 12-10-2018 IPR035906 MetI-like superfamily M634_05115 ce59b6a61551780d69b04238fe8a66a7 476 Pfam PF03553 Na+/H+ antiporter family 37 234 1.6E-12 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 M634_20170 6534ba7b019378d2da72f19c53a3428d 285 Gene3D G3DSA:1.20.1050.10 132 248 3.7E-111 T 12-10-2018 M634_20170 6534ba7b019378d2da72f19c53a3428d 285 Pfam PF02798 Glutathione S-transferase, N-terminal domain 64 126 4.2E-6 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 M634_20170 6534ba7b019378d2da72f19c53a3428d 285 Gene3D G3DSA:3.40.30.10 17 254 3.7E-111 T 12-10-2018 M634_20170 6534ba7b019378d2da72f19c53a3428d 285 SUPERFAMILY SSF52833 38 130 2.15E-15 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M634_20170 6534ba7b019378d2da72f19c53a3428d 285 Pfam PF13410 Glutathione S-transferase, C-terminal domain 176 244 6.0E-10 T 12-10-2018 M634_20170 6534ba7b019378d2da72f19c53a3428d 285 SUPERFAMILY SSF47616 132 278 9.69E-32 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily M634_17760 2fe12402a9a33c6de0f3a9b4da2d06f1 403 SUPERFAMILY SSF56059 93 321 1.69E-29 T 12-10-2018 M634_17760 2fe12402a9a33c6de0f3a9b4da2d06f1 403 Gene3D G3DSA:3.30.470.20 108 400 3.4E-33 T 12-10-2018 M634_06535 268d3c4ce8b8260a0e53cde940d9f146 455 Pfam PF02386 Cation transport protein 51 437 1.9E-54 T 12-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 M634_06535 268d3c4ce8b8260a0e53cde940d9f146 455 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 42 427 6.7E-127 T 12-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 M634_18360 6d363609de8b91e2dbea6a57653dffd4 117 Pfam PF04219 Protein of unknown function, DUF 12 100 4.7E-36 T 12-10-2018 IPR007335 Protein of unknown function DUF413 M634_24100 7f288113168bc741d9b85dd5b2ad9bf6 315 SUPERFAMILY SSF56219 81 310 1.31E-24 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily M634_24100 7f288113168bc741d9b85dd5b2ad9bf6 315 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 94 245 1.1E-7 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase M634_24100 7f288113168bc741d9b85dd5b2ad9bf6 315 Gene3D G3DSA:3.60.10.10 88 313 7.7E-21 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily M634_17220 5bf144c2af82cdb5014ec4b0b42822c3 166 Pfam PF03748 Flagellar basal body-associated protein FliL 67 166 3.1E-14 T 12-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 M634_22245 59e4ed712940e35efe2679184ca8b94b 339 Pfam PF03741 Integral membrane protein TerC family 92 293 3.3E-54 T 12-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 M634_22245 59e4ed712940e35efe2679184ca8b94b 339 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 20 325 4.1E-106 T 12-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 M634_06265 2b44f15fe054601eb69ef281a111be30 261 Gene3D G3DSA:1.10.3470.10 28 260 2.9E-8 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M634_06265 2b44f15fe054601eb69ef281a111be30 261 Pfam PF00950 ABC 3 transport family 1 256 3.2E-74 T 12-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 M634_06265 2b44f15fe054601eb69ef281a111be30 261 SUPERFAMILY SSF81345 2 253 5.36E-38 T 12-10-2018 IPR037294 ABC transporter, BtuC-like M634_14585 b5fb5a39746943dbdff167c21d4ee46d 69 Pfam PF03603 DNA polymerase III psi subunit 1 67 1.8E-17 T 12-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_14585 b5fb5a39746943dbdff167c21d4ee46d 69 Gene3D G3DSA:3.40.50.10220 1 69 1.2E-21 T 12-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_14585 b5fb5a39746943dbdff167c21d4ee46d 69 SUPERFAMILY SSF102220 1 68 5.49E-22 T 12-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_14585 b5fb5a39746943dbdff167c21d4ee46d 69 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 1 65 0.003 T 12-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 M634_23960 07437745990dad79bb21bc4452a5bbe2 223 Pfam PF06912 Protein of unknown function (DUF1275) 13 208 1.7E-30 T 12-10-2018 IPR010699 Protein of unknown function DUF1275 M634_20130 d83d9a0fab8606b46ff72c54bf71e58e 378 Gene3D G3DSA:2.40.160.10 29 367 8.0E-8 T 12-10-2018 IPR023614 Porin domain superfamily M634_20130 d83d9a0fab8606b46ff72c54bf71e58e 378 SUPERFAMILY SSF56935 33 370 1.51E-21 T 12-10-2018 M634_16605 3a19c049ba5d4b9b7a6580632c95cb4e 244 SUPERFAMILY SSF52096 44 141 1.39E-6 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily M634_16605 3a19c049ba5d4b9b7a6580632c95cb4e 244 Gene3D G3DSA:3.90.226.10 31 215 1.0E-6 T 12-10-2018 M634_00405 df07dd6bab28fd52f314f2c572c2f66b 197 Gene3D G3DSA:3.40.50.360 10 188 2.1E-52 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M634_00405 df07dd6bab28fd52f314f2c572c2f66b 197 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 5 191 49.585 T 12-10-2018 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 M634_00405 df07dd6bab28fd52f314f2c572c2f66b 197 SUPERFAMILY SSF52218 10 184 8.38E-47 T 12-10-2018 IPR029039 Flavoprotein-like superfamily M634_00405 df07dd6bab28fd52f314f2c572c2f66b 197 Pfam PF02525 Flavodoxin-like fold 10 168 4.9E-41 T 12-10-2018 IPR003680 Flavodoxin-like fold M634_14930 f76a0dd491250c34052c7ba072bffbdf 256 Pfam PF01061 ABC-2 type transporter 8 218 2.0E-38 T 12-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 M634_14930 f76a0dd491250c34052c7ba072bffbdf 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 1.9E-7 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 M634_14930 f76a0dd491250c34052c7ba072bffbdf 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 102 127 1.9E-7 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 M634_14930 f76a0dd491250c34052c7ba072bffbdf 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 1.9E-7 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 M634_14930 f76a0dd491250c34052c7ba072bffbdf 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 1.9E-7 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 M634_14930 f76a0dd491250c34052c7ba072bffbdf 256 PIRSF PIRSF006648 5 253 3.2E-27 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 M634_15915 db251288558bb64f6a33bf6517bdbce4 447 Pfam PF01523 Putative modulator of DNA gyrase 32 324 9.2E-61 T 12-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 M634_15915 db251288558bb64f6a33bf6517bdbce4 447 SUPERFAMILY SSF111283 12 447 3.92E-129 T 12-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 M634_15915 db251288558bb64f6a33bf6517bdbce4 447 Gene3D G3DSA:3.30.2290.10 7 232 1.4E-83 T 12-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal M634_06100 770c99463c11d8f5abae93a0553e0221 92 SUPERFAMILY SSF52833 5 87 2.46E-29 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M634_06100 770c99463c11d8f5abae93a0553e0221 92 Gene3D G3DSA:3.40.30.10 2 92 2.2E-39 T 12-10-2018 M634_06100 770c99463c11d8f5abae93a0553e0221 92 Pfam PF10262 Rdx family 6 78 1.3E-31 T 12-10-2018 IPR011893 Selenoprotein, Rdx-type M634_06100 770c99463c11d8f5abae93a0553e0221 92 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 6 77 1.0E-24 T 12-10-2018 IPR011893 Selenoprotein, Rdx-type M634_12100 d5fffe628b3a662bf30e324f5950660a 66 Pfam PF14056 Domain of unknown function (DUF4250) 10 61 1.5E-18 T 12-10-2018 IPR025346 Protein of unknown function DUF4250 M634_18000 2f9a43039af0199040060342e716750d 249 Gene3D G3DSA:1.20.1290.10 24 249 1.3E-48 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 M634_18000 2f9a43039af0199040060342e716750d 249 SUPERFAMILY SSF69118 36 247 1.52E-43 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 M634_18000 2f9a43039af0199040060342e716750d 249 Pfam PF02627 Carboxymuconolactone decarboxylase family 158 238 7.1E-11 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 M634_18000 2f9a43039af0199040060342e716750d 249 Pfam PF02627 Carboxymuconolactone decarboxylase family 37 104 1.3E-8 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 M634_14800 37aaf7fda8e4cb8bdcca023778366716 341 Gene3D G3DSA:1.10.3720.10 94 303 1.3E-15 T 12-10-2018 IPR035906 MetI-like superfamily M634_14800 37aaf7fda8e4cb8bdcca023778366716 341 SUPERFAMILY SSF161098 96 288 4.97E-20 T 12-10-2018 IPR035906 MetI-like superfamily M634_14800 37aaf7fda8e4cb8bdcca023778366716 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 305 1.1E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_08015 990aa46a4c83ab0ba1598b95b50e7364 207 SUPERFAMILY SSF46626 37 115 4.25E-10 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_08015 990aa46a4c83ab0ba1598b95b50e7364 207 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 128 202 6.3E-6 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_08015 990aa46a4c83ab0ba1598b95b50e7364 207 Gene3D G3DSA:1.10.760.10 118 206 2.7E-20 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_08015 990aa46a4c83ab0ba1598b95b50e7364 207 Gene3D G3DSA:1.10.760.10 30 114 8.8E-13 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_08015 990aa46a4c83ab0ba1598b95b50e7364 207 PIRSF PIRSF000005 3 207 2.1E-30 T 12-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 M634_08015 990aa46a4c83ab0ba1598b95b50e7364 207 SUPERFAMILY SSF46626 122 205 9.91E-15 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_04085 817b5bdb89ce9db6e0bf271de9de5a39 147 PIRSF PIRSF006318 1 136 3.2E-57 T 12-10-2018 IPR009386 Protein of unknown function DUF1043 M634_04085 817b5bdb89ce9db6e0bf271de9de5a39 147 Pfam PF06295 Protein of unknown function (DUF1043) 6 129 2.2E-47 T 12-10-2018 IPR009386 Protein of unknown function DUF1043 M634_11295 f6b2af11015c970c2d1c78bf30643012 571 Pfam PF00563 EAL domain 358 567 2.7E-38 T 12-10-2018 IPR001633 EAL domain M634_11295 f6b2af11015c970c2d1c78bf30643012 571 SUPERFAMILY SSF141868 356 567 2.22E-45 T 12-10-2018 IPR035919 EAL domain superfamily M634_11295 f6b2af11015c970c2d1c78bf30643012 571 Gene3D G3DSA:3.20.20.450 350 570 3.4E-44 T 12-10-2018 IPR035919 EAL domain superfamily M634_11295 f6b2af11015c970c2d1c78bf30643012 571 SMART SM00052 343 571 6.4E-19 T 12-10-2018 IPR001633 EAL domain M634_20325 b8aa42b528bd2854ec3527f21d4bbda2 205 SUPERFAMILY SSF53474 3 188 7.37E-15 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_16295 81f9591e9d429d3b166b085992fc0ecb 290 Pfam PF03421 YopJ Serine/Threonine acetyltransferase 23 194 1.2E-49 T 12-10-2018 IPR005083 Serine/Threonine acetyltransferase, YopJ M634_12955 08636ebe8e00e7f795b2d8b9b6761900 94 Pfam PF07023 Protein of unknown function (DUF1315) 4 84 1.8E-28 T 12-10-2018 IPR009749 Protein of unknown function DUF1315 M634_20095 7dcabb89cab6b20aee2feb1165794f3e 108 Pfam PF13698 Domain of unknown function (DUF4156) 22 106 8.0E-23 T 12-10-2018 IPR025294 Protein of unknown function DUF4156 M634_17455 7faac44598013f1d3ab944de3e618edf 102 Gene3D G3DSA:3.30.70.100 1 102 2.6E-41 T 12-10-2018 M634_17455 7faac44598013f1d3ab944de3e618edf 102 Pfam PF08803 Putative mono-oxygenase ydhR 4 99 1.5E-41 T 12-10-2018 IPR014910 Putative monooxygenase YdhR M634_17455 7faac44598013f1d3ab944de3e618edf 102 SUPERFAMILY SSF54909 3 96 5.09E-34 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel M634_05410 d663da9f57f7fc40b430fe02984d7bd1 453 Pfam PF11892 Domain of unknown function (DUF3412) 330 450 9.1E-56 T 12-10-2018 IPR021826 Domain of unknown function DUF3412 KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 M634_05410 d663da9f57f7fc40b430fe02984d7bd1 453 Gene3D G3DSA:3.40.50.450 121 450 2.1E-124 T 12-10-2018 M634_05410 d663da9f57f7fc40b430fe02984d7bd1 453 Pfam PF14793 Domain of unknown function (DUF4478) 4 109 1.1E-49 T 12-10-2018 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 M634_05410 d663da9f57f7fc40b430fe02984d7bd1 453 SUPERFAMILY SSF102405 119 327 1.16E-42 T 12-10-2018 M634_05410 d663da9f57f7fc40b430fe02984d7bd1 453 Pfam PF03641 Possible lysine decarboxylase 187 326 1.5E-35 T 12-10-2018 IPR031100 LOG family M634_05410 d663da9f57f7fc40b430fe02984d7bd1 453 Gene3D G3DSA:3.30.1850.10 1 120 3.1E-56 T 12-10-2018 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 M634_18500 10ea93b4939844548476010835d91db4 154 SUPERFAMILY SSF56524 30 149 6.28E-11 T 12-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 M634_01775 29e5144c676220cfc79e820602524b47 184 Pfam PF01169 Uncharacterized protein family UPF0016 7 80 1.4E-20 T 12-10-2018 IPR001727 Gdt1 family M634_01775 29e5144c676220cfc79e820602524b47 184 Pfam PF01169 Uncharacterized protein family UPF0016 103 178 1.5E-20 T 12-10-2018 IPR001727 Gdt1 family M634_07550 dc8c42986c1382a9c11ed4faaf0154b0 197 Pfam PF16036 Chalcone isomerase-like 58 193 8.7E-8 T 12-10-2018 IPR016087 Chalcone isomerase GO:0016872 M634_11835 79f156c8e433885cdfea9088ee474689 635 Pfam PF01578 Cytochrome C assembly protein 89 294 4.0E-40 T 12-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 M634_11835 79f156c8e433885cdfea9088ee474689 635 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 314 621 6.5E-59 T 12-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal M634_11835 79f156c8e433885cdfea9088ee474689 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 158 180 5.3E-63 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 M634_11835 79f156c8e433885cdfea9088ee474689 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 293 309 5.3E-63 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 M634_11835 79f156c8e433885cdfea9088ee474689 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 131 148 5.3E-63 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 M634_11835 79f156c8e433885cdfea9088ee474689 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 5.3E-63 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 M634_11835 79f156c8e433885cdfea9088ee474689 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 209 235 5.3E-63 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 M634_11835 79f156c8e433885cdfea9088ee474689 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 243 263 5.3E-63 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 M634_11835 79f156c8e433885cdfea9088ee474689 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 273 293 5.3E-63 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 M634_06270 238bc1359af429508a1f3d610be403f3 262 Pfam PF00005 ABC transporter 20 148 3.6E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 M634_06270 238bc1359af429508a1f3d610be403f3 262 SUPERFAMILY SSF52540 4 217 1.31E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_06270 238bc1359af429508a1f3d610be403f3 262 SMART SM00382 29 199 4.1E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain M634_06270 238bc1359af429508a1f3d610be403f3 262 Gene3D G3DSA:3.40.50.300 1 239 7.1E-56 T 12-10-2018 M634_14085 6ec68111eae600563ad797c2f2ee97cc 247 Pfam PF11101 Protein of unknown function (DUF2884) 21 245 5.1E-74 T 12-10-2018 IPR021307 Protein of unknown function DUF2884 M634_09515 ff799fbd6c22188e67e800f4540257c2 302 Pfam PF11185 Protein of unknown function (DUF2971) 143 230 5.3E-9 T 12-10-2018 IPR021352 Protein of unknown function DUF2971 M634_18600 3db3bd58a2ea047b90d2922714daa6d5 141 Gene3D G3DSA:3.10.180.10 13 136 8.4E-22 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M634_18600 3db3bd58a2ea047b90d2922714daa6d5 141 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 134 5.1E-7 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain M634_18600 3db3bd58a2ea047b90d2922714daa6d5 141 SUPERFAMILY SSF54593 9 134 2.48E-21 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase M634_06495 5549e74ff79577adb0c4e7d8b0cbcebf 242 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 28 239 5.6E-76 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal M634_06495 5549e74ff79577adb0c4e7d8b0cbcebf 242 SUPERFAMILY SSF53901 37 156 1.51E-5 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 M634_02475 032efd005b7ca790d1671bf50051cf18 514 Pfam PF02646 RmuC family 181 477 9.3E-107 T 12-10-2018 IPR003798 DNA recombination RmuC M634_20060 7381e4fb21b8ff5c3bd55eb1f0c47059 374 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 344 8.2E-97 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 M634_20060 7381e4fb21b8ff5c3bd55eb1f0c47059 374 SUPERFAMILY SSF51395 3 370 7.94E-126 T 12-10-2018 M634_20060 7381e4fb21b8ff5c3bd55eb1f0c47059 374 Gene3D G3DSA:3.20.20.70 6 373 6.2E-140 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_12835 4605642be30adfb47e16ec839c737968 209 SUPERFAMILY SSF52833 1 184 3.41E-35 T 12-10-2018 IPR036249 Thioredoxin-like superfamily M634_12835 4605642be30adfb47e16ec839c737968 209 Gene3D G3DSA:3.40.30.10 1 208 1.7E-58 T 12-10-2018 M634_12835 4605642be30adfb47e16ec839c737968 209 Pfam PF13743 Thioredoxin 6 175 4.7E-23 T 12-10-2018 M634_16100 6b874ad4546fbbf7e14461a1af179da8 592 Pfam PF04932 O-Antigen ligase 221 369 5.4E-14 T 12-10-2018 IPR007016 O-antigen ligase-related M634_16100 6b874ad4546fbbf7e14461a1af179da8 592 Pfam PF15864 Protein glycosylation ligase 174 199 9.1E-11 T 12-10-2018 IPR031726 Protein glycosylation ligase domain M634_16100 6b874ad4546fbbf7e14461a1af179da8 592 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 390 579 1.7E-65 T 12-10-2018 IPR021797 Virulence factor membrane-bound polymerase, C-terminal M634_09525 a753b729ca4f515e8058a230ccf105a0 461 Pfam PF05707 Zonular occludens toxin (Zot) 2 255 9.9E-78 T 12-10-2018 IPR008900 Zona occludens toxin M634_21805 1740aa0911312c1a311a7d1e9f1ea3dd 91 Pfam PF03206 Nitrogen fixation protein NifW 7 72 1.8E-5 T 12-10-2018 IPR004893 Nitrogen fixation protein NifW GO:0009399 M634_14035 70c5a1bffefba3033fde0d0f122953c0 147 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 29.757 T 12-10-2018 IPR003791 Protein of unknown function UPF0178 M634_14035 70c5a1bffefba3033fde0d0f122953c0 147 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 18 145 1.1E-47 T 12-10-2018 IPR003791 Protein of unknown function UPF0178 M634_22625 6531db6db38ea88be9182db807844cd1 225 Gene3D G3DSA:2.40.70.10 83 209 1.6E-39 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily M634_22625 6531db6db38ea88be9182db807844cd1 225 SUPERFAMILY SSF50630 85 216 5.63E-42 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily M634_22625 6531db6db38ea88be9182db807844cd1 225 Pfam PF05618 Putative ATP-dependant zinc protease 85 219 9.6E-43 T 12-10-2018 M634_22845 33f32f80e10066ca200ac485f6ae581f 135 Pfam PF14760 Rnk N-terminus 6 43 4.2E-12 T 12-10-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain M634_22845 33f32f80e10066ca200ac485f6ae581f 135 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 125 1.3E-16 T 12-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 M634_22845 33f32f80e10066ca200ac485f6ae581f 135 PIRSF PIRSF006092 22 127 5.7E-30 T 12-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 M634_22845 33f32f80e10066ca200ac485f6ae581f 135 PIRSF PIRSF006092 1 31 24.0 T 12-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 M634_22845 33f32f80e10066ca200ac485f6ae581f 135 SUPERFAMILY SSF54534 49 126 2.62E-16 T 12-10-2018 M634_22845 33f32f80e10066ca200ac485f6ae581f 135 Gene3D G3DSA:3.10.50.30 45 135 5.5E-26 T 12-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 M634_16980 de5ce4311edfd1f6f380833291fb5867 791 Gene3D G3DSA:2.60.40.2610 610 699 1.3E-7 T 12-10-2018 M634_16980 de5ce4311edfd1f6f380833291fb5867 791 Pfam PF00577 Outer membrane usher protein 206 683 1.8E-32 T 12-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 M634_16980 de5ce4311edfd1f6f380833291fb5867 791 Gene3D G3DSA:2.60.40.3110 230 319 3.4E-9 T 12-10-2018 M634_16790 be6232f18c66470b76432bffb14c2c79 480 Pfam PF07603 Protein of unknown function (DUF1566) 294 416 3.1E-11 T 12-10-2018 IPR011460 Protein of unknown function DUF1566 M634_14065 f4e1e330892cd49d36410c8593a56b45 68 Pfam PF06786 Uncharacterised protein family (UPF0253) 1 67 8.9E-37 T 12-10-2018 IPR009624 Uncharacterised protein family UPF0253 M634_14065 f4e1e330892cd49d36410c8593a56b45 68 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 7 65 2.0E-26 T 12-10-2018 IPR009624 Uncharacterised protein family UPF0253 M634_14065 f4e1e330892cd49d36410c8593a56b45 68 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 68 29.948 T 12-10-2018 IPR009624 Uncharacterised protein family UPF0253 M634_11865 f8083130876f7b8d459d3f0955c035d6 235 Gene3D G3DSA:1.25.40.10 143 235 3.8E-27 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_11865 f8083130876f7b8d459d3f0955c035d6 235 SUPERFAMILY SSF48452 102 208 1.39E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_09555 1989e2e4264f09cf9c0d049b1309f21e 402 Pfam PF02486 Replication initiation factor 203 380 2.0E-30 T 12-10-2018 IPR003491 Replication initiation factor GO:0003677|GO:0003916|GO:0006270 M634_02265 f7df2ace1a62f836d2a7d01fbd669ffb 312 Pfam PF05036 Sporulation related domain 51 120 1.5E-4 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 M634_21115 7be8dc909a862f374c6235818acfde86 327 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 319 1.4E-53 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 M634_21770 1940a4885ef633b0bfc675366e3f4d5c 159 Pfam PF04073 Aminoacyl-tRNA editing domain 34 143 1.2E-19 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 M634_21770 1940a4885ef633b0bfc675366e3f4d5c 159 SUPERFAMILY SSF55826 5 147 2.75E-30 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 M634_21770 1940a4885ef633b0bfc675366e3f4d5c 159 Gene3D G3DSA:3.90.960.10 3 150 6.4E-40 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 M634_13335 80dbfe999b03d8ee1add25901a6f73e9 202 Pfam PF05036 Sporulation related domain 126 194 7.7E-13 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 M634_13335 80dbfe999b03d8ee1add25901a6f73e9 202 Gene3D G3DSA:3.30.70.1070 120 196 4.1E-11 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 M634_13335 80dbfe999b03d8ee1add25901a6f73e9 202 SUPERFAMILY SSF110997 125 198 2.62E-16 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 M634_04580 77d04baf20b33300ee25d9445ebeee26 113 Pfam PF10973 Protein of unknown function (DUF2799) 28 108 6.0E-22 T 12-10-2018 IPR021242 Protein of unknown function DUF2799 M634_01040 df5c7204138923472c7521cc4722793b 130 SUPERFAMILY SSF46689 9 109 8.42E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_12935 71c8b0a657f7955d4e377ebb13d79b3f 182 Pfam PF00881 Nitroreductase family 8 161 8.2E-23 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 M634_12935 71c8b0a657f7955d4e377ebb13d79b3f 182 SUPERFAMILY SSF55469 1 181 7.85E-42 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 M634_12935 71c8b0a657f7955d4e377ebb13d79b3f 182 PIRSF PIRSF000232 1 182 1.9E-62 T 12-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like M634_12935 71c8b0a657f7955d4e377ebb13d79b3f 182 Gene3D G3DSA:3.40.109.10 1 182 2.3E-42 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 M634_08830 e0633be7f864e23fbdf9d36ba2467860 519 SUPERFAMILY SSF56801 2 486 2.49E-86 T 12-10-2018 M634_08830 e0633be7f864e23fbdf9d36ba2467860 519 ProSitePatterns PS00455 Putative AMP-binding domain signature. 156 167 - T 12-10-2018 IPR020845 AMP-binding, conserved site M634_08830 e0633be7f864e23fbdf9d36ba2467860 519 Pfam PF00501 AMP-binding enzyme 10 391 6.5E-60 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 M634_08830 e0633be7f864e23fbdf9d36ba2467860 519 Gene3D G3DSA:3.40.50.12780 4 384 2.0E-69 T 12-10-2018 M634_01660 0dbf107ad56c40c1189db148a4430d00 260 TIGRFAM TIGR02356 adenyl_thiF: thiazole biosynthesis adenylyltransferase ThiF 9 214 2.9E-88 T 12-10-2018 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF KEGG: 00730+2.7.7.73|MetaCyc: PWY-6891|MetaCyc: PWY-6892 M634_01660 0dbf107ad56c40c1189db148a4430d00 260 SUPERFAMILY SSF69572 2 251 2.35E-74 T 12-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 M634_01660 0dbf107ad56c40c1189db148a4430d00 260 Gene3D G3DSA:3.40.50.720 2 258 1.3E-83 T 12-10-2018 M634_01660 0dbf107ad56c40c1189db148a4430d00 260 Pfam PF00899 ThiF family 10 247 9.9E-58 T 12-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 M634_00935 dd13abffb2a40adc67dc1e9dfdf89bc9 385 PRINTS PR01035 Tetracycline resistance protein signature 97 118 6.9E-10 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 M634_00935 dd13abffb2a40adc67dc1e9dfdf89bc9 385 PRINTS PR01035 Tetracycline resistance protein signature 237 257 6.9E-10 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 M634_00935 dd13abffb2a40adc67dc1e9dfdf89bc9 385 PRINTS PR01035 Tetracycline resistance protein signature 39 58 6.9E-10 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 M634_00935 dd13abffb2a40adc67dc1e9dfdf89bc9 385 PRINTS PR01035 Tetracycline resistance protein signature 127 149 6.9E-10 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 M634_00935 dd13abffb2a40adc67dc1e9dfdf89bc9 385 PRINTS PR01035 Tetracycline resistance protein signature 293 313 6.9E-10 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 M634_00935 dd13abffb2a40adc67dc1e9dfdf89bc9 385 Pfam PF07690 Major Facilitator Superfamily 7 341 1.6E-37 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M634_00935 dd13abffb2a40adc67dc1e9dfdf89bc9 385 Gene3D G3DSA:1.20.1250.20 3 373 1.4E-46 T 12-10-2018 M634_00935 dd13abffb2a40adc67dc1e9dfdf89bc9 385 SUPERFAMILY SSF103473 5 372 4.32E-55 T 12-10-2018 IPR036259 MFS transporter superfamily M634_23990 29cb387d4a4c9aac844e07c159fa1729 111 SUPERFAMILY SSF47413 5 61 1.77E-11 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M634_23990 29cb387d4a4c9aac844e07c159fa1729 111 Gene3D G3DSA:1.10.260.40 4 67 5.3E-11 T 12-10-2018 M634_23990 29cb387d4a4c9aac844e07c159fa1729 111 Pfam PF13560 Helix-turn-helix domain 13 61 5.4E-10 T 12-10-2018 M634_23990 29cb387d4a4c9aac844e07c159fa1729 111 SMART SM00530 9 64 3.6E-8 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 M634_02640 be0a7f0b02cd4c0fe3a11bd117e5cf11 684 Pfam PF05170 AsmA family 1 569 6.5E-181 T 12-10-2018 IPR007844 AsmA M634_05310 8b6e2d56a80c13dffcbefc58a0bb340e 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 6.9E-73 T 12-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 M634_05310 8b6e2d56a80c13dffcbefc58a0bb340e 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 90.329 T 12-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 M634_05310 8b6e2d56a80c13dffcbefc58a0bb340e 149 Pfam PF03477 ATP cone domain 50 136 2.2E-17 T 12-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 M634_12645 b35e8e61415bef43f4a31cf0e4c5589f 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 1.9E-41 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_12645 b35e8e61415bef43f4a31cf0e4c5589f 306 Gene3D G3DSA:1.10.3720.10 84 301 5.7E-22 T 12-10-2018 IPR035906 MetI-like superfamily M634_12645 b35e8e61415bef43f4a31cf0e4c5589f 306 SUPERFAMILY SSF161098 88 291 1.53E-20 T 12-10-2018 IPR035906 MetI-like superfamily M634_20545 ed5dddd9b6824d4ecb573ac45538d7fd 44 TIGRFAM TIGR02808 short_TIGR02808: TIGR02808 family protein 1 42 3.3E-26 T 12-10-2018 IPR014175 Conserved hypothetical protein CHP02808 M634_20545 ed5dddd9b6824d4ecb573ac45538d7fd 44 Pfam PF09574 Protein of unknown function (Duf2374) 1 42 1.5E-26 T 12-10-2018 IPR014175 Conserved hypothetical protein CHP02808 M634_09190 e88b25c60d56252b71d2872c451148ef 323 SUPERFAMILY SSF53850 27 322 6.44E-92 T 12-10-2018 M634_09190 e88b25c60d56252b71d2872c451148ef 323 Pfam PF16868 NMT1-like family 31 320 9.9E-98 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family M634_09190 e88b25c60d56252b71d2872c451148ef 323 Gene3D G3DSA:3.40.190.10 31 320 2.5E-109 T 12-10-2018 M634_09190 e88b25c60d56252b71d2872c451148ef 323 Gene3D G3DSA:3.40.190.10 118 256 2.5E-109 T 12-10-2018 M634_09190 e88b25c60d56252b71d2872c451148ef 323 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 5 320 1.1E-121 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family M634_12190 02d5289c67c40fe3a3d8a0e86c12d48d 427 Pfam PF12704 MacB-like periplasmic core domain 20 255 6.2E-27 T 12-10-2018 IPR025857 MacB-like periplasmic core domain M634_12190 02d5289c67c40fe3a3d8a0e86c12d48d 427 Pfam PF02687 FtsX-like permease family 322 420 4.6E-10 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 M634_02455 82f0fe044bb4c40d905ff0952b7e4523 342 Pfam PF01594 AI-2E family transporter 14 332 1.6E-47 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like M634_02615 f2d417bb2d68ed2952a06d4e53f8066f 180 SUPERFAMILY SSF52540 3 171 1.85E-17 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_02615 f2d417bb2d68ed2952a06d4e53f8066f 180 Pfam PF13521 AAA domain 4 164 5.4E-40 T 12-10-2018 IPR038727 NadR/Ttd14, AAA domain M634_02615 f2d417bb2d68ed2952a06d4e53f8066f 180 Gene3D G3DSA:3.40.50.300 1 168 4.1E-8 T 12-10-2018 M634_12850 13f0bbe4f83fe25cbccb35458d79b77a 167 Pfam PF11993 Ribosomal S4P (gammaproteobacterial) 1 164 9.8E-64 T 12-10-2018 IPR021879 Ribosomal S4P (gammaproteobacterial) M634_23025 660bdc4e69827693af044a5ff6bb2073 128 Gene3D G3DSA:3.10.450.10 37 122 2.4E-7 T 12-10-2018 M634_23025 660bdc4e69827693af044a5ff6bb2073 128 SUPERFAMILY SSF54403 44 114 3.89E-14 T 12-10-2018 M634_23025 660bdc4e69827693af044a5ff6bb2073 128 Pfam PF00031 Cystatin domain 52 109 2.2E-5 T 12-10-2018 IPR000010 Cystatin domain GO:0004869 M634_19990 ca38a089449481a9fd59b89661a1fac5 259 Pfam PF04366 Las17-binding protein actin regulator 171 256 2.4E-5 T 12-10-2018 IPR007461 Ysc84 actin-binding domain M634_02040 32a55727af32f0d9dcbd492ed0690f62 217 Pfam PF03006 Haemolysin-III related 10 207 3.2E-39 T 12-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 M634_02040 32a55727af32f0d9dcbd492ed0690f62 217 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 13 213 6.9E-69 T 12-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 M634_03840 23d1750a7f08c7a8751daf57493bf1a9 239 Pfam PF04402 Protein of unknown function (DUF541) 41 217 1.7E-16 T 12-10-2018 IPR007497 Protein of unknown function DUF541 M634_03840 23d1750a7f08c7a8751daf57493bf1a9 239 PIRSF PIRSF029033 1 239 4.4E-109 T 12-10-2018 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein M634_03840 23d1750a7f08c7a8751daf57493bf1a9 239 Gene3D G3DSA:3.30.70.2970 53 169 1.3E-11 T 12-10-2018 M634_03840 23d1750a7f08c7a8751daf57493bf1a9 239 Gene3D G3DSA:3.30.110.170 43 211 1.3E-11 T 12-10-2018 M634_10425 106a6bfd21dd4636cfcec072b93fbba3 94 Pfam PF01527 Transposase 10 73 4.7E-9 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 M634_10425 106a6bfd21dd4636cfcec072b93fbba3 94 SUPERFAMILY SSF46689 7 92 1.08E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_22365 0bb77bc03885f74ff7917d09321017d7 251 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 6 251 43.529 T 12-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 M634_22365 0bb77bc03885f74ff7917d09321017d7 251 Gene3D G3DSA:3.20.20.370 6 251 1.1E-97 T 12-10-2018 M634_22365 0bb77bc03885f74ff7917d09321017d7 251 SUPERFAMILY SSF88713 7 249 2.74E-91 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 M634_22365 0bb77bc03885f74ff7917d09321017d7 251 Pfam PF03746 LamB/YcsF family 9 246 3.4E-94 T 12-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 M634_18950 f23fa1bcbaecb7609cec4bd365f05b5c 253 SMART SM00849 10 209 6.1E-16 T 12-10-2018 IPR001279 Metallo-beta-lactamase M634_18950 f23fa1bcbaecb7609cec4bd365f05b5c 253 Pfam PF00753 Metallo-beta-lactamase superfamily 10 209 1.9E-18 T 12-10-2018 IPR001279 Metallo-beta-lactamase M634_18950 f23fa1bcbaecb7609cec4bd365f05b5c 253 SUPERFAMILY SSF56281 8 243 2.36E-37 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M634_18950 f23fa1bcbaecb7609cec4bd365f05b5c 253 Gene3D G3DSA:3.60.15.10 2 236 9.2E-33 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like M634_20895 f76afabc1b2e4239d58ee00f6b6320c4 280 SUPERFAMILY SSF53850 34 252 1.81E-14 T 12-10-2018 M634_20895 f76afabc1b2e4239d58ee00f6b6320c4 280 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 41 270 4.5E-44 T 12-10-2018 M634_20895 f76afabc1b2e4239d58ee00f6b6320c4 280 Gene3D G3DSA:3.40.190.10 41 251 3.1E-27 T 12-10-2018 M634_20895 f76afabc1b2e4239d58ee00f6b6320c4 280 Gene3D G3DSA:3.40.190.10 120 219 3.1E-27 T 12-10-2018 M634_04130 99b5f4effe777918e054de9f378fe3fe 235 SMART SM00749 125 188 0.0033 T 12-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria M634_04130 99b5f4effe777918e054de9f378fe3fe 235 SMART SM00749 48 111 33.0 T 12-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria M634_04130 99b5f4effe777918e054de9f378fe3fe 235 Pfam PF04972 BON domain 120 185 2.2E-16 T 12-10-2018 IPR007055 BON domain M634_04130 99b5f4effe777918e054de9f378fe3fe 235 Pfam PF04972 BON domain 44 110 4.4E-13 T 12-10-2018 IPR007055 BON domain M634_07025 ba8e79430027099d2bf1a5778a204c64 181 Pfam PF07445 Primosomal replication protein priC 4 178 8.7E-51 T 12-10-2018 IPR010890 Primosomal replication PriB/PriC M634_07025 ba8e79430027099d2bf1a5778a204c64 181 Gene3D G3DSA:1.20.1270.340 1 98 3.8E-16 T 12-10-2018 IPR038338 PriB/PriC superfamily M634_11490 9ba5b191e8b93e1b221a4659f3288999 89 SUPERFAMILY SSF88697 2 87 7.95E-7 T 12-10-2018 IPR015947 PUA-like superfamily M634_11490 9ba5b191e8b93e1b221a4659f3288999 89 Gene3D G3DSA:2.30.130.30 1 77 2.0E-17 T 12-10-2018 M634_13885 c4c60cce6942f5fefda755c00c620373 281 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 66 270 2.5E-6 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase M634_13885 c4c60cce6942f5fefda755c00c620373 281 Gene3D G3DSA:3.60.10.10 60 281 1.5E-19 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily M634_13885 c4c60cce6942f5fefda755c00c620373 281 Hamap MF_01119 UPF0294 protein YafD [yafD]. 1 278 58.789 T 12-10-2018 IPR022958 Uncharacterised protein family UPF0294 M634_13885 c4c60cce6942f5fefda755c00c620373 281 SUPERFAMILY SSF56219 61 277 7.2E-23 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily M634_14940 a37ef6f9457cd46bb5b0b72537245580 556 SUPERFAMILY SSF52091 439 541 1.37E-10 T 12-10-2018 IPR036513 STAS domain superfamily M634_14940 a37ef6f9457cd46bb5b0b72537245580 556 Gene3D G3DSA:3.30.750.24 428 550 1.2E-13 T 12-10-2018 IPR036513 STAS domain superfamily M634_14940 a37ef6f9457cd46bb5b0b72537245580 556 Pfam PF00916 Sulfate permease family 11 376 1.2E-85 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 M634_14940 a37ef6f9457cd46bb5b0b72537245580 556 Pfam PF01740 STAS domain 440 533 4.8E-12 T 12-10-2018 IPR002645 STAS domain M634_09865 ed3f5ac3804734195da5365d4410bb10 302 Gene3D G3DSA:3.30.420.40 119 290 1.2E-100 T 12-10-2018 M634_09865 ed3f5ac3804734195da5365d4410bb10 302 Gene3D G3DSA:3.30.420.40 4 297 1.2E-100 T 12-10-2018 M634_09865 ed3f5ac3804734195da5365d4410bb10 302 Pfam PF00480 ROK family 2 300 8.6E-74 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 M634_09865 ed3f5ac3804734195da5365d4410bb10 302 ProSitePatterns PS01125 ROK family signature. 130 157 - T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 M634_09865 ed3f5ac3804734195da5365d4410bb10 302 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 302 64.255 T 12-10-2018 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906 M634_09865 ed3f5ac3804734195da5365d4410bb10 302 SUPERFAMILY SSF53067 1 299 1.8E-57 T 12-10-2018 M634_06470 a159733ab94a5b9e1b17064dcfbeb937 466 Gene3D G3DSA:3.40.50.12780 10 329 1.0E-24 T 12-10-2018 M634_06470 a159733ab94a5b9e1b17064dcfbeb937 466 Pfam PF00501 AMP-binding enzyme 20 317 1.5E-18 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 M634_06470 a159733ab94a5b9e1b17064dcfbeb937 466 SUPERFAMILY SSF56801 18 465 7.2E-56 T 12-10-2018 M634_06470 a159733ab94a5b9e1b17064dcfbeb937 466 Pfam PF13193 AMP-binding enzyme C-terminal domain 372 455 2.2E-7 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain M634_06470 a159733ab94a5b9e1b17064dcfbeb937 466 Gene3D G3DSA:3.30.300.30 357 463 1.8E-16 T 12-10-2018 M634_03810 6bd2e231adb31ca0a1ea20809ed780a6 176 Pfam PF05068 Mannitol repressor 7 170 1.3E-61 T 12-10-2018 IPR007761 Mannitol repressor MtlR-like M634_03810 6bd2e231adb31ca0a1ea20809ed780a6 176 Gene3D G3DSA:1.20.120.330 1 172 5.7E-72 T 12-10-2018 M634_03810 6bd2e231adb31ca0a1ea20809ed780a6 176 SUPERFAMILY SSF158668 4 170 4.32E-58 T 12-10-2018 IPR038026 MtlR-like superfamily M634_04775 d7f5338fd1510c9fb05d19df6670063f 734 SUPERFAMILY SSF69322 69 379 8.5E-8 T 12-10-2018 M634_04775 d7f5338fd1510c9fb05d19df6670063f 734 SUPERFAMILY SSF161098 418 530 5.72E-8 T 12-10-2018 IPR035906 MetI-like superfamily M634_04775 d7f5338fd1510c9fb05d19df6670063f 734 SUPERFAMILY SSF161098 502 720 1.83E-18 T 12-10-2018 IPR035906 MetI-like superfamily M634_04775 d7f5338fd1510c9fb05d19df6670063f 734 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 452 728 1.2E-12 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_23080 4a940286bd9f5897ca328612f39dba4a 265 PIRSF PIRSF029288 1 265 6.5E-91 T 12-10-2018 IPR009211 Predicted virulence protein, SciE type M634_23080 4a940286bd9f5897ca328612f39dba4a 265 SUPERFAMILY SSF144059 3 261 4.45E-84 T 12-10-2018 M634_23080 4a940286bd9f5897ca328612f39dba4a 265 Pfam PF07024 ImpE protein 139 258 6.3E-34 T 12-10-2018 IPR009211 Predicted virulence protein, SciE type M634_23080 4a940286bd9f5897ca328612f39dba4a 265 Gene3D G3DSA:1.25.40.10 1 86 1.1E-17 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_16445 1025edcbc28ecddc58edb32083dc24c1 608 SUPERFAMILY SSF53098 217 359 3.34E-15 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily M634_16445 1025edcbc28ecddc58edb32083dc24c1 608 Gene3D G3DSA:3.30.420.10 212 434 3.6E-31 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 M634_16445 1025edcbc28ecddc58edb32083dc24c1 608 Pfam PF00665 Integrase core domain 221 356 2.6E-14 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 M634_12000 5e574226282986cc10d22760ec2aef27 41 Pfam PF08056 Tryptophan operon leader peptide 1 41 5.1E-31 T 12-10-2018 IPR012639 Tryptophan operon leader peptide M634_12000 5e574226282986cc10d22760ec2aef27 41 ProDom PD926058 BIOSYNTHESIS PEPTIDE LEADER AROMATIC VC1176 VV1222 OPERON ACID AMINO AMINO-ACID 1 41 1.0E-7 T 12-10-2018 IPR012639 Tryptophan operon leader peptide M634_01765 0a88463a9b23da10bf76a1b135f757f8 82 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 12-10-2018 IPR001455 TusA-like domain M634_01765 0a88463a9b23da10bf76a1b135f757f8 82 Gene3D G3DSA:3.30.110.40 5 80 2.0E-28 T 12-10-2018 IPR036868 TusA-like domain superfamily M634_01765 0a88463a9b23da10bf76a1b135f757f8 82 SUPERFAMILY SSF64307 9 80 8.11E-25 T 12-10-2018 IPR036868 TusA-like domain superfamily M634_01765 0a88463a9b23da10bf76a1b135f757f8 82 Pfam PF01206 Sulfurtransferase TusA 10 79 8.4E-23 T 12-10-2018 IPR001455 TusA-like domain M634_01765 0a88463a9b23da10bf76a1b135f757f8 82 Hamap MF_00413 Sulfur carrier protein TusA [tusA]. 3 81 28.713 T 12-10-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 M634_09875 9318fbff297757e3fcb6f7559ca724e1 275 Pfam PF04116 Fatty acid hydroxylase superfamily 92 229 2.8E-25 T 12-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 M634_09475 06cf9e75a9f6afa02021b5694dddb58f 574 Pfam PF11949 Protein of unknown function (DUF3466) 250 574 9.2E-53 T 12-10-2018 IPR022562 Protein of unknown function DUF3466 M634_09475 06cf9e75a9f6afa02021b5694dddb58f 574 Pfam PF11949 Protein of unknown function (DUF3466) 5 198 1.3E-8 T 12-10-2018 IPR022562 Protein of unknown function DUF3466 M634_09475 06cf9e75a9f6afa02021b5694dddb58f 574 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 555 574 0.001 T 12-10-2018 IPR020008 GlyGly-CTERM domain M634_06525 53053c3deaa1020cf35cc4314a923fb3 411 SMART SM00487 20 221 6.2E-59 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain M634_06525 53053c3deaa1020cf35cc4314a923fb3 411 Pfam PF00270 DEAD/DEAH box helicase 25 194 9.5E-48 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 M634_06525 53053c3deaa1020cf35cc4314a923fb3 411 Gene3D G3DSA:3.40.50.300 1 216 1.3E-72 T 12-10-2018 M634_06525 53053c3deaa1020cf35cc4314a923fb3 411 Pfam PF00271 Helicase conserved C-terminal domain 233 338 9.0E-27 T 12-10-2018 IPR001650 Helicase, C-terminal M634_06525 53053c3deaa1020cf35cc4314a923fb3 411 SMART SM00490 257 338 1.4E-30 T 12-10-2018 IPR001650 Helicase, C-terminal M634_06525 53053c3deaa1020cf35cc4314a923fb3 411 SUPERFAMILY SSF52540 74 359 6.56E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_06525 53053c3deaa1020cf35cc4314a923fb3 411 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site M634_06525 53053c3deaa1020cf35cc4314a923fb3 411 Gene3D G3DSA:3.40.50.300 217 372 1.2E-44 T 12-10-2018 M634_17070 49b61c97af7f440e0825056d5a40d232 479 Pfam PF03929 PepSY-associated TM region 24 416 2.4E-62 T 12-10-2018 IPR005625 PepSY-associated TM protein M634_23955 06be14a81d7cedcca0b5c2e54c0e4a96 133 SUPERFAMILY SSF51316 3 132 1.57E-32 T 12-10-2018 IPR011057 Mss4-like superfamily M634_23955 06be14a81d7cedcca0b5c2e54c0e4a96 133 Gene3D G3DSA:2.170.150.70 7 122 1.7E-11 T 12-10-2018 M634_23955 06be14a81d7cedcca0b5c2e54c0e4a96 133 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 28 117 1.3E-20 T 12-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 M634_07520 54b7e66df6817f98fadd0a2ae984bc2f 139 Pfam PF12680 SnoaL-like domain 8 108 3.1E-12 T 12-10-2018 IPR037401 SnoaL-like domain M634_07520 54b7e66df6817f98fadd0a2ae984bc2f 139 Gene3D G3DSA:3.10.450.50 4 125 1.0E-20 T 12-10-2018 M634_07520 54b7e66df6817f98fadd0a2ae984bc2f 139 SUPERFAMILY SSF54427 5 129 2.44E-22 T 12-10-2018 IPR032710 NTF2-like domain superfamily M634_05860 da8461a8599cad61e1e0ddb10063f9bc 105 Pfam PF04316 Anti-sigma-28 factor, FlgM 42 95 1.0E-17 T 12-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal M634_05860 da8461a8599cad61e1e0ddb10063f9bc 105 SUPERFAMILY SSF101498 2 98 2.48E-21 T 12-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily M634_05860 da8461a8599cad61e1e0ddb10063f9bc 105 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 4 98 1.3E-23 T 12-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 M634_19445 6b4070943283e4ed6d9eb36472003fd6 280 Pfam PF02698 DUF218 domain 6 133 3.2E-16 T 12-10-2018 IPR003848 Domain of unknown function DUF218 M634_09355 9fc148b54172e40b534d3817c5ff86a2 365 Gene3D G3DSA:1.10.3720.10 148 363 4.8E-48 T 12-10-2018 IPR035906 MetI-like superfamily M634_09355 9fc148b54172e40b534d3817c5ff86a2 365 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 173 357 3.0E-22 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_09355 9fc148b54172e40b534d3817c5ff86a2 365 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 155 251 6.9E-22 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 M634_09355 9fc148b54172e40b534d3817c5ff86a2 365 SUPERFAMILY SSF161098 155 346 6.15E-40 T 12-10-2018 IPR035906 MetI-like superfamily M634_10315 cea0991ee4bc5712c2f936cc7bca6c7a 144 Pfam PF06127 Protein of unknown function (DUF962) 1 142 2.1E-20 T 12-10-2018 IPR009305 Protein of unknown function DUF962 M634_18760 f4c000a41f1e212336e74e1d6d7c1cdd 174 Pfam PF11286 Protein of unknown function (DUF3087) 1 171 2.8E-64 T 12-10-2018 IPR021438 Protein of unknown function DUF3087 M634_13650 765f204838c257ecffd979823c886ad3 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 67 83 1.0E-12 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 M634_13650 765f204838c257ecffd979823c886ad3 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 88 101 1.0E-12 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 M634_13650 765f204838c257ecffd979823c886ad3 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 32 48 1.0E-12 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 M634_13650 765f204838c257ecffd979823c886ad3 103 Pfam PF02049 Flagellar hook-basal body complex protein FliE 18 103 6.0E-29 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 M634_13650 765f204838c257ecffd979823c886ad3 103 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 18 102 1.1E-18 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 M634_13650 765f204838c257ecffd979823c886ad3 103 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 1 103 16.721 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 M634_22460 581ce7b32a3080e2cc35709a99e492b5 380 Pfam PF05707 Zonular occludens toxin (Zot) 1 193 1.9E-33 T 12-10-2018 IPR008900 Zona occludens toxin M634_22460 581ce7b32a3080e2cc35709a99e492b5 380 Gene3D G3DSA:3.40.50.300 1 194 3.2E-43 T 12-10-2018 M634_22460 581ce7b32a3080e2cc35709a99e492b5 380 SUPERFAMILY SSF52540 4 141 9.31E-7 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_03845 4b1a857b19bf8be91cb5c42d388bf003 349 Pfam PF14321 Domain of unknown function (DUF4382) 32 200 5.7E-21 T 12-10-2018 IPR025491 Domain of unknown function DUF4382 M634_01405 59dfe607cf3fa03e91fe28febcb349eb 516 PIRSF PIRSF028175 1 516 0.0 T 12-10-2018 IPR014540 Uncharacterised conserved protein UCP028175 M634_18130 0ea69d8673236d03ec0023af2ff324f9 197 Pfam PF00924 Mechanosensitive ion channel 75 174 6.5E-12 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 M634_18130 0ea69d8673236d03ec0023af2ff324f9 197 Gene3D G3DSA:2.30.30.60 124 176 1.9E-7 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily M634_18130 0ea69d8673236d03ec0023af2ff324f9 197 SUPERFAMILY SSF50182 109 175 7.52E-12 T 12-10-2018 IPR010920 LSM domain superfamily M634_15340 3b8ac1e2f2e6db60eb6026a3926eecb9 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 63 1.0E-30 T 12-10-2018 IPR009491 Protein of unknown function DUF1107 M634_15340 3b8ac1e2f2e6db60eb6026a3926eecb9 68 Gene3D G3DSA:3.30.1910.10 1 63 1.6E-29 T 12-10-2018 M634_15340 3b8ac1e2f2e6db60eb6026a3926eecb9 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 4.9E-29 T 12-10-2018 IPR009491 Protein of unknown function DUF1107 M634_20815 9cd08abb4b23f32085bd5c49d770af5b 355 Pfam PF02653 Branched-chain amino acid transport system / permease component 50 330 1.2E-39 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 M634_09240 c75e887e8459167b43bd2b65697e2007 395 Pfam PF04303 PrpF protein 8 390 8.1E-174 T 12-10-2018 IPR007400 PrpF protein M634_09240 c75e887e8459167b43bd2b65697e2007 395 SUPERFAMILY SSF54506 6 184 2.67E-70 T 12-10-2018 M634_09240 c75e887e8459167b43bd2b65697e2007 395 Gene3D G3DSA:3.10.310.10 183 373 1.0E-148 T 12-10-2018 M634_09240 c75e887e8459167b43bd2b65697e2007 395 SUPERFAMILY SSF54506 188 393 3.14E-75 T 12-10-2018 M634_09240 c75e887e8459167b43bd2b65697e2007 395 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 7 394 1.3E-234 T 12-10-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 M634_09240 c75e887e8459167b43bd2b65697e2007 395 Gene3D G3DSA:3.10.310.10 13 387 1.0E-148 T 12-10-2018 M634_12195 ae604478b81231f31a1b96cfc8971491 404 Pfam PF12704 MacB-like periplasmic core domain 19 236 1.2E-23 T 12-10-2018 IPR025857 MacB-like periplasmic core domain M634_12195 ae604478b81231f31a1b96cfc8971491 404 Pfam PF02687 FtsX-like permease family 305 396 1.3E-13 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 M634_13775 6ad5deff04bc83d5cfdf43927cea1144 356 Pfam PF01594 AI-2E family transporter 20 345 2.0E-76 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like M634_19810 3adb8c0598f2d0067c19278069eacfd4 402 Pfam PF07690 Major Facilitator Superfamily 11 296 1.9E-10 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 M634_19810 3adb8c0598f2d0067c19278069eacfd4 402 Gene3D G3DSA:1.20.1250.20 8 385 6.1E-24 T 12-10-2018 M634_19810 3adb8c0598f2d0067c19278069eacfd4 402 SUPERFAMILY SSF103473 9 388 2.88E-34 T 12-10-2018 IPR036259 MFS transporter superfamily M634_02125 430db4e2e543ba11498a682841a4929e 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 96 129 1.7E-5 T 12-10-2018 IPR001451 Hexapeptide repeat M634_02125 430db4e2e543ba11498a682841a4929e 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 40 9.7E-4 T 12-10-2018 IPR001451 Hexapeptide repeat M634_02125 430db4e2e543ba11498a682841a4929e 182 SUPERFAMILY SSF51161 4 174 1.14E-43 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily M634_02125 430db4e2e543ba11498a682841a4929e 182 Gene3D G3DSA:2.160.10.10 1 182 2.5E-55 T 12-10-2018 M634_23075 2961b510bb18ec010f7358c6b4d2b672 154 Pfam PF04965 Gene 25-like lysozyme 35 130 4.4E-18 T 12-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD M634_23075 2961b510bb18ec010f7358c6b4d2b672 154 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 5 144 7.3E-31 T 12-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein M634_23075 2961b510bb18ec010f7358c6b4d2b672 154 SUPERFAMILY SSF160719 60 139 2.35E-8 T 12-10-2018 M634_20890 1e86b3e95f9751d97eec5deae1b36120 106 Pfam PF08895 Domain of unknown function (DUF1840) 1 103 7.7E-33 T 12-10-2018 IPR014991 Protein of unknown function DUF1840 M634_02375 084b28add471c09568ac383b83683c0a 292 SUPERFAMILY SSF103481 183 276 1.57E-5 T 12-10-2018 M634_02375 084b28add471c09568ac383b83683c0a 292 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 274 6.3E-71 T 12-10-2018 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 M634_02375 084b28add471c09568ac383b83683c0a 292 Pfam PF00892 EamA-like transporter family 139 275 7.4E-7 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M634_02375 084b28add471c09568ac383b83683c0a 292 SUPERFAMILY SSF103481 35 131 3.4E-5 T 12-10-2018 M634_08520 06d27412c7107e7d8fa74e3c4bdc1c43 269 Pfam PF04991 LicD family 24 242 6.9E-53 T 12-10-2018 IPR007074 LicD family M634_07835 420e99dacea79597d3b0d419598323e4 476 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 34 48 - T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 M634_07835 420e99dacea79597d3b0d419598323e4 476 SUPERFAMILY SSF161070 10 457 9.94E-129 T 12-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 M634_07835 420e99dacea79597d3b0d419598323e4 476 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 18 39 3.8E-12 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 M634_07835 420e99dacea79597d3b0d419598323e4 476 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 315 335 3.8E-12 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 M634_07835 420e99dacea79597d3b0d419598323e4 476 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 91 117 3.8E-12 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 M634_07835 420e99dacea79597d3b0d419598323e4 476 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 47 66 3.8E-12 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 M634_07835 420e99dacea79597d3b0d419598323e4 476 Pfam PF00209 Sodium:neurotransmitter symporter family 10 120 2.0E-21 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 M634_07835 420e99dacea79597d3b0d419598323e4 476 Pfam PF00209 Sodium:neurotransmitter symporter family 150 447 5.9E-33 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 M634_09735 9795ca5f823a7517b0d45fa81a7b6fa0 293 Pfam PF15575 Immunity protein 49 73 277 2.2E-42 T 12-10-2018 IPR029074 Immunity protein 49 M634_15745 9fb8429631f43774aead51c9239df2f7 159 Pfam PF06271 RDD family 9 149 8.6E-20 T 12-10-2018 IPR010432 RDD M634_07690 4487098a4ac6844d586314ab88bed5e2 140 Pfam PF05232 Chlorhexidine efflux transporter 69 131 8.8E-22 T 12-10-2018 IPR007896 Chlorhexidine efflux transporter M634_07690 4487098a4ac6844d586314ab88bed5e2 140 Pfam PF05232 Chlorhexidine efflux transporter 1 63 6.9E-24 T 12-10-2018 IPR007896 Chlorhexidine efflux transporter M634_14010 6df234353995f79e429c3ad8be9cec4b 104 PIRSF PIRSF006257 1 104 3.2E-44 T 12-10-2018 IPR007384 Protein of unknown function UCP006257 M634_14010 6df234353995f79e429c3ad8be9cec4b 104 SUPERFAMILY SSF158452 1 103 2.09E-38 T 12-10-2018 IPR036814 YqcC-like superfamily M634_14010 6df234353995f79e429c3ad8be9cec4b 104 Gene3D G3DSA:1.20.1440.40 1 104 4.3E-35 T 12-10-2018 IPR036814 YqcC-like superfamily M634_14010 6df234353995f79e429c3ad8be9cec4b 104 Pfam PF04287 tRNA pseudouridine synthase C 7 102 2.0E-35 T 12-10-2018 IPR023376 YqcC-like domain M634_15850 7f19a0a3a457d364d2dcd77b170ad226 263 Pfam PF02405 Permease MlaE 48 259 7.0E-74 T 12-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 M634_15850 7f19a0a3a457d364d2dcd77b170ad226 263 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 9 261 1.2E-95 T 12-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria M634_11775 9c7601e1f1b8186b51d0f95800f17d64 221 Pfam PF11201 Protein of unknown function (DUF2982) 67 216 2.9E-62 T 12-10-2018 IPR021367 Protein of unknown function DUF2982 M634_21005 dc5733a29f7be4d9cafc9d2a7c2c12c1 244 Gene3D G3DSA:3.40.109.10 27 243 5.7E-50 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 M634_21005 dc5733a29f7be4d9cafc9d2a7c2c12c1 244 Pfam PF00881 Nitroreductase family 36 219 4.4E-19 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 M634_21005 dc5733a29f7be4d9cafc9d2a7c2c12c1 244 SUPERFAMILY SSF55469 31 242 2.22E-55 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 M634_11655 9f3ad2b8be9cd18c494d7dbedc991423 208 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 6 12 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 M634_11655 9f3ad2b8be9cd18c494d7dbedc991423 208 SUPERFAMILY SSF53335 2 156 2.13E-9 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_11655 9f3ad2b8be9cd18c494d7dbedc991423 208 Pfam PF05063 MT-A70 3 175 1.1E-21 T 12-10-2018 IPR007757 MT-A70-like M634_05005 2c6b02c6443bae8ded1a46075e96150a 214 SUPERFAMILY SSF101082 5 183 4.84E-29 T 12-10-2018 M634_05005 2c6b02c6443bae8ded1a46075e96150a 214 TIGRFAM TIGR02780 TrbJ_Ti: P-type conjugative transfer protein TrbJ 2 209 1.6E-50 T 12-10-2018 IPR014147 Type IV conjugative transfer protein TrbJ M634_19195 ea90a7e8bc9e518d87c5d54763bc0504 194 Gene3D G3DSA:2.170.170.11 20 136 1.3E-28 T 12-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 M634_19195 ea90a7e8bc9e518d87c5d54763bc0504 194 SUPERFAMILY SSF51645 22 189 9.02E-25 T 12-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 M634_23415 842b94d66cda860aebfb26dfafdcab11 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 7.0E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_23415 842b94d66cda860aebfb26dfafdcab11 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 7.0E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_23415 842b94d66cda860aebfb26dfafdcab11 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 7.0E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_23415 842b94d66cda860aebfb26dfafdcab11 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 7.0E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_23415 842b94d66cda860aebfb26dfafdcab11 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 7.0E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_23415 842b94d66cda860aebfb26dfafdcab11 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 7.0E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_23415 842b94d66cda860aebfb26dfafdcab11 252 Gene3D G3DSA:3.40.50.720 1 252 1.3E-71 T 12-10-2018 M634_23415 842b94d66cda860aebfb26dfafdcab11 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 2.8E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_23415 842b94d66cda860aebfb26dfafdcab11 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 2.8E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_23415 842b94d66cda860aebfb26dfafdcab11 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.8E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_23415 842b94d66cda860aebfb26dfafdcab11 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 M634_23415 842b94d66cda860aebfb26dfafdcab11 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 250 2.7E-54 T 12-10-2018 M634_23415 842b94d66cda860aebfb26dfafdcab11 252 SUPERFAMILY SSF51735 4 250 2.82E-68 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_23415 842b94d66cda860aebfb26dfafdcab11 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 193 0.0014 T 12-10-2018 M634_10055 ce4b206c108e8a9637b17a4b4bbd100a 171 Gene3D G3DSA:2.40.160.20 19 171 1.1E-25 T 12-10-2018 M634_10055 ce4b206c108e8a9637b17a4b4bbd100a 171 Pfam PF13505 Outer membrane protein beta-barrel domain 6 170 1.0E-18 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel M634_10055 ce4b206c108e8a9637b17a4b4bbd100a 171 SUPERFAMILY SSF56925 19 170 8.37E-28 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel M634_09530 06a7964132c3d48db3d4dddbd03249fd 114 Pfam PF10734 Protein of unknown function (DUF2523) 37 110 2.7E-5 T 12-10-2018 IPR019670 Protein of unkown function DUF2523 M634_16065 977d741e90fcde84ce93ee05c43b72e5 216 Pfam PF04612 Type II secretion system (T2SS), protein M 8 75 2.5E-8 T 12-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 M634_02050 95f947c1cc032d553bb1d0878d8d71a4 481 Pfam PF02386 Cation transport protein 51 475 2.6E-49 T 12-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 M634_02050 95f947c1cc032d553bb1d0878d8d71a4 481 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 464 1.0E-114 T 12-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 M634_02050 95f947c1cc032d553bb1d0878d8d71a4 481 PIRSF PIRSF006247 1 481 6.5E-166 T 12-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 M634_03475 b19e530badd02435691790ef1c9f3407 301 TIGRFAM TIGR03899 TIGR03899: TIGR03899 family protein 40 289 1.2E-109 T 12-10-2018 IPR021254 Protein of unknown function DUF2806 M634_03475 b19e530badd02435691790ef1c9f3407 301 Pfam PF10987 Protein of unknown function (DUF2806) 61 279 5.1E-86 T 12-10-2018 IPR021254 Protein of unknown function DUF2806 M634_20620 df56bf59109833babfe537412175b38f 137 SUPERFAMILY SSF75620 8 115 7.45E-11 T 12-10-2018 M634_20620 df56bf59109833babfe537412175b38f 137 Pfam PF00472 RF-1 domain 7 132 1.9E-23 T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 M634_20620 df56bf59109833babfe537412175b38f 137 Gene3D G3DSA:3.30.160.20 1 136 9.5E-38 T 12-10-2018 M634_20620 df56bf59109833babfe537412175b38f 137 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 M634_10185 5cd9f3642768f4ba804a1db1f6a8088c 374 Pfam PF13487 HD domain 273 304 4.3E-9 T 12-10-2018 M634_10185 5cd9f3642768f4ba804a1db1f6a8088c 374 Gene3D G3DSA:1.10.3210.10 156 368 2.7E-33 T 12-10-2018 M634_10185 5cd9f3642768f4ba804a1db1f6a8088c 374 SUPERFAMILY SSF109604 174 352 1.51E-13 T 12-10-2018 M634_10185 5cd9f3642768f4ba804a1db1f6a8088c 374 SUPERFAMILY SSF55781 13 138 6.67E-6 T 12-10-2018 M634_09180 43b8a9378790cbf792756ddce82a3a97 399 Pfam PF04888 Secretion system effector C (SseC) like family 116 394 1.9E-50 T 12-10-2018 IPR006972 Secretion system effector C, SseC-like GO:0009405 M634_19305 9603f0d6daf355dba0e2451aaeb2ac7f 418 Gene3D G3DSA:3.40.50.1110 133 412 6.3E-39 T 12-10-2018 IPR036514 SGNH hydrolase superfamily M634_19305 9603f0d6daf355dba0e2451aaeb2ac7f 418 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 147 158 - T 12-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 M634_19305 9603f0d6daf355dba0e2451aaeb2ac7f 418 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 147 405 3.3E-18 T 12-10-2018 IPR001087 GDSL lipase/esterase GO:0016788 M634_19305 9603f0d6daf355dba0e2451aaeb2ac7f 418 SUPERFAMILY SSF52266 146 408 2.66E-22 T 12-10-2018 M634_06305 47b7b6ae62f8cc7c048f1764167eb56a 142 Gene3D G3DSA:3.30.428.10 1 141 1.8E-43 T 12-10-2018 IPR036265 HIT-like superfamily M634_06305 47b7b6ae62f8cc7c048f1764167eb56a 142 Pfam PF01230 HIT domain 11 99 3.1E-19 T 12-10-2018 IPR001310 Histidine triad (HIT) protein M634_06305 47b7b6ae62f8cc7c048f1764167eb56a 142 SUPERFAMILY SSF54197 3 133 1.36E-34 T 12-10-2018 IPR036265 HIT-like superfamily M634_06305 47b7b6ae62f8cc7c048f1764167eb56a 142 PIRSF PIRSF000714 2 140 2.2E-54 T 12-10-2018 IPR026026 Histidine triad hydrolase, Hint-type M634_07780 c876ee75fd892a0aef41b1172d2fd6fc 223 Pfam PF04012 PspA/IM30 family 2 217 8.2E-61 T 12-10-2018 IPR007157 PspA/IM30 M634_07780 c876ee75fd892a0aef41b1172d2fd6fc 223 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 219 3.0E-94 T 12-10-2018 IPR014319 Phage shock protein, PspA M634_11965 3ff203dbec738d24b3f086cdba7ceaa2 255 SUPERFAMILY SSF81301 6 64 3.64E-7 T 12-10-2018 M634_11965 3ff203dbec738d24b3f086cdba7ceaa2 255 Gene3D G3DSA:3.30.460.10 7 93 1.6E-6 T 12-10-2018 M634_12495 81712478b8d8879e5386a2c10e9ceb6a 174 Pfam PF02620 Uncharacterized ACR, COG1399 62 173 6.8E-17 T 12-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD M634_20625 e859da8137b882e8cf936bd1e2cebfd1 200 Gene3D G3DSA:1.10.150.240 22 94 2.2E-43 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 M634_20625 e859da8137b882e8cf936bd1e2cebfd1 200 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 9 189 2.5E-55 T 12-10-2018 IPR010976 Beta-phosphoglucomutase hydrolase M634_20625 e859da8137b882e8cf936bd1e2cebfd1 200 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 128 189 3.9E-12 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 M634_20625 e859da8137b882e8cf936bd1e2cebfd1 200 Gene3D G3DSA:3.40.50.1000 11 191 2.2E-43 T 12-10-2018 IPR023214 HAD superfamily M634_20625 e859da8137b882e8cf936bd1e2cebfd1 200 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 189 2.2E-26 T 12-10-2018 M634_20625 e859da8137b882e8cf936bd1e2cebfd1 200 SUPERFAMILY SSF56784 8 194 1.73E-44 T 12-10-2018 IPR036412 HAD-like superfamily M634_05120 c50194fd0e1a7a911d48727f1f81aa45 203 Pfam PF09335 SNARE associated Golgi protein 37 157 4.5E-22 T 12-10-2018 IPR032816 SNARE associated Golgi protein M634_21540 ce3b38971e6b741dda0e435ee758973f 147 Pfam PF01478 Type IV leader peptidase family 13 108 3.3E-8 T 12-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 M634_15720 f21482f9ff48126dddec2d40dcc0dfb7 223 Pfam PF08887 GAD-like domain 5 107 1.5E-37 T 12-10-2018 IPR014983 GAD-related M634_01895 cd65b4d2aa7b3afd5c8f13b0bc7b3152 129 Pfam PF03899 ATP synthase I chain 15 111 1.3E-20 T 12-10-2018 IPR005598 ATP synthase protein I M634_06005 dfe868abf109633eecb603986d637898 153 Gene3D G3DSA:2.40.50.140 80 153 7.6E-11 T 12-10-2018 M634_06005 dfe868abf109633eecb603986d637898 153 Pfam PF01957 NfeD-like C-terminal, partner-binding 14 150 5.6E-26 T 12-10-2018 IPR002810 NfeD-like, C-terminal domain M634_06005 dfe868abf109633eecb603986d637898 153 SUPERFAMILY SSF141322 113 151 2.62E-5 T 12-10-2018 M634_13070 780504f7de70ace41b29b3bdbabdbfdc 115 Pfam PF10761 Protein of unknown function (DUF2590) 8 105 6.5E-39 T 12-10-2018 IPR019697 Bacteriophage HP1, Orf28 M634_22455 baebe967d11122b8c9724c2bf54f8391 104 Pfam PF10734 Protein of unknown function (DUF2523) 15 95 7.2E-7 T 12-10-2018 IPR019670 Protein of unkown function DUF2523 M634_15980 2876cdfb1001051c471230199773e91e 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 154 1.5E-36 T 12-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 M634_15980 2876cdfb1001051c471230199773e91e 162 Pfam PF04093 rod shape-determining protein MreD 9 154 8.5E-40 T 12-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 M634_15980 2876cdfb1001051c471230199773e91e 162 PIRSF PIRSF018472 1 162 9.3E-42 T 12-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type M634_19610 4410907091e640c25c1b09c9b48097dd 178 SUPERFAMILY SSF46689 3 69 1.75E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 M634_19610 4410907091e640c25c1b09c9b48097dd 178 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 56 1.6E-15 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M634_19610 4410907091e640c25c1b09c9b48097dd 178 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 7.2E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M634_19610 4410907091e640c25c1b09c9b48097dd 178 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 7.2E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 M634_19610 4410907091e640c25c1b09c9b48097dd 178 Gene3D G3DSA:1.10.357.10 1 172 5.1E-25 T 12-10-2018 M634_19610 4410907091e640c25c1b09c9b48097dd 178 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 54 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site M634_10025 fb67ebfe8a317180c9af94db6984bf27 372 Gene3D G3DSA:3.40.50.2000 40 364 3.8E-66 T 12-10-2018 M634_10025 fb67ebfe8a317180c9af94db6984bf27 372 Gene3D G3DSA:3.40.50.2000 181 353 3.8E-66 T 12-10-2018 M634_10025 fb67ebfe8a317180c9af94db6984bf27 372 Pfam PF13439 Glycosyltransferase Family 4 26 184 2.4E-20 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 M634_10025 fb67ebfe8a317180c9af94db6984bf27 372 SUPERFAMILY SSF53756 15 365 6.28E-73 T 12-10-2018 M634_10025 fb67ebfe8a317180c9af94db6984bf27 372 Pfam PF00534 Glycosyl transferases group 1 190 341 7.1E-37 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 M634_24610 1746ded537674c0a6a4b060b7ebbcad7 306 Pfam PF13737 Transposase DDE domain 19 129 5.2E-45 T 12-10-2018 IPR025668 Transposase DDE domain M634_03530 7edbe168061a6d70a726ed50563fd910 1255 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 920 1254 5.4E-65 T 12-10-2018 IPR007452 Translocation and assembly module TamB M634_15085 a8d1a60fdfbcfeb7cbe75d5fbe5c5e01 153 Pfam PF09335 SNARE associated Golgi protein 56 146 1.3E-9 T 12-10-2018 IPR032816 SNARE associated Golgi protein M634_15085 a8d1a60fdfbcfeb7cbe75d5fbe5c5e01 153 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 24 136 0.007 T 12-10-2018 IPR020143 Uncharacterised protein family, RP436 M634_00415 f8501f3b395171da03d3d40e8d176649 162 Pfam PF09523 Protein of unknown function (DUF2390) 15 115 4.1E-28 T 12-10-2018 IPR012659 Conserved hypothetical protein CHP02444 M634_00415 f8501f3b395171da03d3d40e8d176649 162 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 13 119 6.2E-35 T 12-10-2018 IPR012659 Conserved hypothetical protein CHP02444 M634_17810 06b2f3448f33688b042b1722420ad020 663 Pfam PF01136 Peptidase family U32 447 591 4.6E-9 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 M634_17810 06b2f3448f33688b042b1722420ad020 663 Pfam PF01136 Peptidase family U32 78 293 5.8E-65 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 M634_06980 3fcccd89ef56a2c3b1e5091c6e65ed55 515 Pfam PF11840 Protein of unknown function (DUF3360) 11 514 1.1E-264 T 12-10-2018 IPR021794 Protein of unknown function DUF3360 M634_09850 faf97d47f4f2899581e495ee547f1684 195 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 8 188 2.6E-73 T 12-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 M634_09850 faf97d47f4f2899581e495ee547f1684 195 Pfam PF12804 MobA-like NTP transferase domain 10 158 2.3E-34 T 12-10-2018 IPR025877 MobA-like NTP transferase M634_09850 faf97d47f4f2899581e495ee547f1684 195 Gene3D G3DSA:3.90.550.10 3 193 1.8E-58 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M634_09850 faf97d47f4f2899581e495ee547f1684 195 SUPERFAMILY SSF53448 7 189 1.71E-35 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M634_09850 faf97d47f4f2899581e495ee547f1684 195 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 5 190 30.234 T 12-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 M634_03235 6950a5837dae6fc055af7b2698601bfc 305 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 13 295 1.3E-98 T 12-10-2018 M634_03235 6950a5837dae6fc055af7b2698601bfc 305 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 4 298 20.796 T 12-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 M634_03235 6950a5837dae6fc055af7b2698601bfc 305 Pfam PF01040 UbiA prenyltransferase family 21 270 1.5E-39 T 12-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 M634_03235 6950a5837dae6fc055af7b2698601bfc 305 PIRSF PIRSF005355 1 303 7.9E-85 T 12-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 M634_11800 66dcbda0d824997f2248c24d793140cc 345 Gene3D G3DSA:1.20.1420.20 27 345 5.2E-74 T 12-10-2018 IPR038352 Imelysin-like domain superfamily M634_11800 66dcbda0d824997f2248c24d793140cc 345 Pfam PF09375 Imelysin 48 324 4.5E-41 T 12-10-2018 IPR018976 Imelysin-like domain M634_09725 42ae72536f7bc1c00d76572a226dee15 299 Pfam PF15575 Immunity protein 49 68 283 2.3E-41 T 12-10-2018 IPR029074 Immunity protein 49 M634_22560 009ce51e9e8cf89f18627de2d8954c45 93 Pfam PF10115 Transcriptional activator HlyU 2 92 1.3E-40 T 12-10-2018 IPR018772 Transcription activator HlyU M634_16905 07d9176ded47a82373367682da67901b 324 Pfam PF02958 Ecdysteroid kinase 169 266 5.6E-10 T 12-10-2018 IPR004119 Protein of unknown function DUF227 M634_16905 07d9176ded47a82373367682da67901b 324 Pfam PF02958 Ecdysteroid kinase 80 145 1.0E-4 T 12-10-2018 IPR004119 Protein of unknown function DUF227 M634_16905 07d9176ded47a82373367682da67901b 324 Gene3D G3DSA:3.90.1200.10 122 270 4.0E-7 T 12-10-2018 M634_16905 07d9176ded47a82373367682da67901b 324 SUPERFAMILY SSF56112 26 310 2.15E-24 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily M634_23045 e73794c5dbeb512e6a109b5a460fe184 96 Pfam PF05488 PAAR motif 18 85 1.0E-23 T 12-10-2018 IPR008727 PAAR motif M634_23045 e73794c5dbeb512e6a109b5a460fe184 96 Gene3D G3DSA:2.60.200.60 1 53 2.0E-11 T 12-10-2018 M634_23045 e73794c5dbeb512e6a109b5a460fe184 96 Gene3D G3DSA:2.60.200.60 54 95 1.7E-11 T 12-10-2018 M634_10290 f7e2165c12b4683181052f5d3211a3af 159 SUPERFAMILY SSF53850 41 155 1.14E-5 T 12-10-2018 M634_14360 b3c3a2b6844d3fa319d15ec7b6712d99 356 SUPERFAMILY SSF51445 7 313 1.07E-51 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily M634_14360 b3c3a2b6844d3fa319d15ec7b6712d99 356 Gene3D G3DSA:3.20.20.80 20 313 4.7E-32 T 12-10-2018 M634_14360 b3c3a2b6844d3fa319d15ec7b6712d99 356 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 40 292 6.4E-11 T 12-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 M634_14360 b3c3a2b6844d3fa319d15ec7b6712d99 356 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 163 172 - T 12-10-2018 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 M634_08595 63d626aaafdef44c66a8fbb68ff5aa6b 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 266 3.0E-18 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_08595 63d626aaafdef44c66a8fbb68ff5aa6b 282 SUPERFAMILY SSF161098 10 278 1.96E-56 T 12-10-2018 IPR035906 MetI-like superfamily M634_08595 63d626aaafdef44c66a8fbb68ff5aa6b 282 Gene3D G3DSA:1.10.3720.10 13 278 4.9E-53 T 12-10-2018 IPR035906 MetI-like superfamily M634_22995 8d97a2489749934d9691f16da0a32ec8 331 PIRSF PIRSF039012 9 331 7.0E-91 T 12-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 M634_22995 8d97a2489749934d9691f16da0a32ec8 331 SUPERFAMILY SSF53187 37 330 4.63E-52 T 12-10-2018 M634_22995 8d97a2489749934d9691f16da0a32ec8 331 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 56 329 8.3E-72 T 12-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 M634_22995 8d97a2489749934d9691f16da0a32ec8 331 Gene3D G3DSA:3.40.630.10 14 329 3.7E-71 T 12-10-2018 M634_04115 a893671035d3d515bb610a7dc544dd4e 245 Gene3D G3DSA:1.10.760.10 26 210 1.2E-16 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_04115 a893671035d3d515bb610a7dc544dd4e 245 SUPERFAMILY SSF46626 16 208 6.59E-50 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 M634_04115 a893671035d3d515bb610a7dc544dd4e 245 Pfam PF02167 Cytochrome C1 family 33 244 5.3E-16 T 12-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 M634_17150 146b446e9b39563579ba8c0a62357a1c 272 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 200 261 7.8E-11 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) M634_17150 146b446e9b39563579ba8c0a62357a1c 272 SUPERFAMILY SSF101801 197 262 2.62E-9 T 12-10-2018 IPR036429 SpoA-like superfamily M634_18655 0da2d3aa91792a116fd982f8dab51212 299 SUPERFAMILY SSF103481 188 285 5.1E-12 T 12-10-2018 M634_18655 0da2d3aa91792a116fd982f8dab51212 299 Pfam PF00892 EamA-like transporter family 9 135 5.5E-14 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M634_18655 0da2d3aa91792a116fd982f8dab51212 299 Pfam PF00892 EamA-like transporter family 151 283 1.5E-13 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 M634_18655 0da2d3aa91792a116fd982f8dab51212 299 SUPERFAMILY SSF103481 42 138 3.14E-12 T 12-10-2018 M634_07580 00d178314ba1d6efd52a463da030d502 434 SUPERFAMILY SSF53613 31 417 1.77E-44 T 12-10-2018 IPR029056 Ribokinase-like M634_07580 00d178314ba1d6efd52a463da030d502 434 Pfam PF00294 pfkB family carbohydrate kinase 77 292 1.1E-11 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB M634_17505 416e6456a503e5ebbef8074d70d9e6e9 64 Gene3D G3DSA:3.40.50.1820 3 64 8.4E-7 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold M634_23875 5f06b316249994294522b1c693ec3cc5 210 PIRSF PIRSF006324 1 209 1.6E-58 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 M634_23875 5f06b316249994294522b1c693ec3cc5 210 Pfam PF01810 LysE type translocator 16 205 6.0E-28 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 M634_12990 49315f9a3431af8cc37ee7cf3fad903c 315 SUPERFAMILY SSF159501 32 282 1.78E-74 T 12-10-2018 M634_12990 49315f9a3431af8cc37ee7cf3fad903c 315 Gene3D G3DSA:1.10.8.760 155 219 1.9E-28 T 12-10-2018 M634_12990 49315f9a3431af8cc37ee7cf3fad903c 315 Gene3D G3DSA:3.40.50.11550 45 268 1.9E-28 T 12-10-2018 M634_12990 49315f9a3431af8cc37ee7cf3fad903c 315 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 55 255 8.5E-61 T 12-10-2018 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN M634_12990 49315f9a3431af8cc37ee7cf3fad903c 315 PIRSF PIRSF020419 1 299 3.6E-79 T 12-10-2018 IPR016773 Ferric uptake regulator, CjrA, predicted M634_23180 b2c2dbecaab209e2fbfa3ff408202410 134 Pfam PF03479 Domain of unknown function (DUF296) 5 110 7.5E-23 T 12-10-2018 IPR005175 PPC domain M634_23180 b2c2dbecaab209e2fbfa3ff408202410 134 SUPERFAMILY SSF117856 4 131 3.66E-36 T 12-10-2018 M634_23180 b2c2dbecaab209e2fbfa3ff408202410 134 Gene3D G3DSA:3.30.1330.80 2 134 1.2E-46 T 12-10-2018 M634_17635 3ca3e1cd7c43b5272ddacb7c4862b7a2 182 SUPERFAMILY SSF47413 42 87 5.33E-5 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 M634_24025 5b452ca3a927f28b55a5881fa0b3f13f 147 SUPERFAMILY SSF55804 1 145 1.7E-35 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 M634_24025 5b452ca3a927f28b55a5881fa0b3f13f 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 145 1.0E-31 T 12-10-2018 IPR002178 PTS EIIA type-2 domain M634_24025 5b452ca3a927f28b55a5881fa0b3f13f 147 Gene3D G3DSA:3.40.930.10 1 146 8.9E-48 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 M634_20520 2000a0129de57d82a4272d94a06c8ddf 206 PIRSF PIRSF006324 1 206 4.9E-44 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 M634_20520 2000a0129de57d82a4272d94a06c8ddf 206 Pfam PF01810 LysE type translocator 15 204 4.8E-27 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 M634_24140 d4ade5ef69667ed20e61582cfc734a11 310 Pfam PF13354 Beta-lactamase enzyme family 74 279 1.5E-35 T 12-10-2018 M634_24140 d4ade5ef69667ed20e61582cfc734a11 310 Gene3D G3DSA:3.40.710.10 47 308 4.9E-67 T 12-10-2018 M634_24140 d4ade5ef69667ed20e61582cfc734a11 310 PRINTS PR00118 Beta-lactamase class A signature 52 76 3.8E-57 T 12-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 M634_24140 d4ade5ef69667ed20e61582cfc734a11 310 PRINTS PR00118 Beta-lactamase class A signature 125 150 3.8E-57 T 12-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 M634_24140 d4ade5ef69667ed20e61582cfc734a11 310 PRINTS PR00118 Beta-lactamase class A signature 83 100 3.8E-57 T 12-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 M634_24140 d4ade5ef69667ed20e61582cfc734a11 310 PRINTS PR00118 Beta-lactamase class A signature 187 212 3.8E-57 T 12-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 M634_24140 d4ade5ef69667ed20e61582cfc734a11 310 PRINTS PR00118 Beta-lactamase class A signature 161 185 3.8E-57 T 12-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 M634_24140 d4ade5ef69667ed20e61582cfc734a11 310 PRINTS PR00118 Beta-lactamase class A signature 240 255 3.8E-57 T 12-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 M634_24140 d4ade5ef69667ed20e61582cfc734a11 310 PRINTS PR00118 Beta-lactamase class A signature 223 238 3.8E-57 T 12-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 M634_24140 d4ade5ef69667ed20e61582cfc734a11 310 SUPERFAMILY SSF56601 47 307 2.64E-72 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like M634_24140 d4ade5ef69667ed20e61582cfc734a11 310 ProSitePatterns PS00146 Beta-lactamase class-A active site. 85 100 - T 12-10-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 M634_03020 273743232d5cbd96ddf574cb5ca91342 136 SUPERFAMILY SSF54637 5 134 2.2E-36 T 12-10-2018 IPR029069 HotDog domain superfamily M634_03020 273743232d5cbd96ddf574cb5ca91342 136 Pfam PF01575 MaoC like domain 12 108 1.3E-23 T 12-10-2018 IPR002539 MaoC-like dehydratase domain M634_03020 273743232d5cbd96ddf574cb5ca91342 136 Gene3D G3DSA:3.10.129.10 1 136 3.9E-43 T 12-10-2018 M634_19570 f08cc2457da0981dff3f9347f0e9ccae 132 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 26 112 3.3E-19 T 12-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 M634_19570 f08cc2457da0981dff3f9347f0e9ccae 132 SUPERFAMILY SSF51316 2 131 3.87E-43 T 12-10-2018 IPR011057 Mss4-like superfamily M634_19570 f08cc2457da0981dff3f9347f0e9ccae 132 Gene3D G3DSA:3.90.1590.10 1 116 8.2E-20 T 12-10-2018 M634_10555 5a76caaa9f8bedcf7b075c2ade73ceb1 179 Pfam PF03703 Bacterial PH domain 104 174 8.4E-9 T 12-10-2018 IPR005182 Domain of unknown function DUF304 M634_11810 76211c15a57714a3c29af513bde5e1fb 420 Gene3D G3DSA:1.20.1420.20 15 402 1.7E-85 T 12-10-2018 IPR038352 Imelysin-like domain superfamily M634_11810 76211c15a57714a3c29af513bde5e1fb 420 Pfam PF09375 Imelysin 40 397 3.1E-97 T 12-10-2018 IPR018976 Imelysin-like domain M634_12075 8d1219cc7bcf0bfefea182cb03561265 98 Gene3D G3DSA:3.30.70.1060 1 98 5.2E-38 T 12-10-2018 M634_12075 8d1219cc7bcf0bfefea182cb03561265 98 Pfam PF03795 YCII-related domain 1 95 2.2E-29 T 12-10-2018 IPR005545 YCII-related M634_12075 8d1219cc7bcf0bfefea182cb03561265 98 SUPERFAMILY SSF54909 1 98 2.5E-32 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel M634_16625 51c6c6bbcbf7049c71b03541edcacbc4 454 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 43 426 2.6E-107 T 12-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 M634_16625 51c6c6bbcbf7049c71b03541edcacbc4 454 Pfam PF02386 Cation transport protein 52 437 5.5E-56 T 12-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 M634_04515 9619a9c6c8b28d7e71b5acb69ef1fb20 382 Pfam PF02690 Na+/Pi-cotransporter 218 326 1.7E-18 T 12-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 M634_04515 9619a9c6c8b28d7e71b5acb69ef1fb20 382 Pfam PF02690 Na+/Pi-cotransporter 30 150 8.4E-23 T 12-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 M634_22525 57015d1def650269a45670420ddaeda7 55 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 49 3.0E-25 T 12-10-2018 IPR005371 Uncharacterised protein family UPF0181 M634_22525 57015d1def650269a45670420ddaeda7 55 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 48 3.0E-20 T 12-10-2018 IPR005371 Uncharacterised protein family UPF0181 M634_22525 57015d1def650269a45670420ddaeda7 55 Hamap MF_00507 UPF0181 protein YoaH [yoaH]. 1 53 17.438 T 12-10-2018 IPR005371 Uncharacterised protein family UPF0181 M634_21380 71ecbd99fd15e4a6cd18bc5662a7e7f6 455 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 55 441 6.7E-140 T 12-10-2018 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 M634_21380 71ecbd99fd15e4a6cd18bc5662a7e7f6 455 Pfam PF03606 C4-dicarboxylate anaerobic carrier 2 451 3.8E-124 T 12-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 M634_02085 3a2ab64676fc6eb4c4cdc4225c143439 159 Pfam PF04361 Protein of unknown function (DUF494) 2 159 4.9E-59 T 12-10-2018 IPR007456 Smg M634_02085 3a2ab64676fc6eb4c4cdc4225c143439 159 Hamap MF_00598 Protein Smg [smg]. 2 159 32.554 T 12-10-2018 IPR007456 Smg M634_22420 1796c3ab717928c78bb80e76c6388886 126 Pfam PF12472 Phage related protein 67 123 2.9E-21 T 12-10-2018 IPR021096 Vibrio phage VSK, Orf152 M634_06940 c8f6de4be4fd3f98fc420e412257c871 519 Pfam PF04293 SpoVR like protein 26 456 1.7E-177 T 12-10-2018 IPR007390 Sporulation stage V, protein R M634_22140 b3b8c2e58f231087a4554e0617f5092e 434 Pfam PF00294 pfkB family carbohydrate kinase 138 300 3.5E-12 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB M634_22140 b3b8c2e58f231087a4554e0617f5092e 434 SUPERFAMILY SSF53613 34 417 4.32E-46 T 12-10-2018 IPR029056 Ribokinase-like M634_23845 f3b14e42e2a2b6a5e707ff616ebb3e0b 294 Pfam PF00510 Cytochrome c oxidase subunit III 8 293 4.9E-49 T 12-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23845 f3b14e42e2a2b6a5e707ff616ebb3e0b 294 Gene3D G3DSA:1.20.120.80 79 294 6.7E-62 T 12-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23845 f3b14e42e2a2b6a5e707ff616ebb3e0b 294 SUPERFAMILY SSF81452 4 294 4.5E-78 T 12-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 M634_23845 f3b14e42e2a2b6a5e707ff616ebb3e0b 294 Gene3D G3DSA:1.10.287.70 1 78 4.9E-17 T 12-10-2018 M634_00110 3faf671063ed37328ab3277abda8ec75 71 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 63 9.8E-24 T 12-10-2018 IPR014318 Phage shock protein, PspG M634_00110 3faf671063ed37328ab3277abda8ec75 71 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 2 64 9.3E-23 T 12-10-2018 IPR014318 Phage shock protein, PspG M634_13455 df96a08a448a897ce7293e77b18d64dd 242 Pfam PF11859 Protein of unknown function (DUF3379) 1 238 4.8E-88 T 12-10-2018 IPR021806 Protein of unknown function DUF3379 M634_22890 663741fd95ac96fb542f85216093da39 310 Pfam PF05235 CHAD domain 29 254 2.2E-46 T 12-10-2018 IPR007899 CHAD domain M634_22890 663741fd95ac96fb542f85216093da39 310 Gene3D G3DSA:1.40.20.10 6 309 1.2E-58 T 12-10-2018 IPR038186 CHAD domain superfamily M634_22890 663741fd95ac96fb542f85216093da39 310 SMART SM00880 26 288 3.2E-29 T 12-10-2018 IPR007899 CHAD domain M634_09805 737de206bd328ba21922455e7b622778 154 Pfam PF11749 Protein of unknown function (DUF3305) 58 144 2.2E-19 T 12-10-2018 IPR021736 Protein of unknown function DUF3305 M634_15690 816a9d4ada2159d98d21889893eae897 103 Gene3D G3DSA:1.20.58.280 1 101 9.5E-35 T 12-10-2018 M634_15690 816a9d4ada2159d98d21889893eae897 103 PIRSF PIRSF000699 1 103 2.7E-37 T 12-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 M634_15690 816a9d4ada2159d98d21889893eae897 103 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 6 97 1.3E-33 T 12-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 M634_15690 816a9d4ada2159d98d21889893eae897 103 SUPERFAMILY SSF46973 2 98 4.32E-34 T 12-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 M634_09615 8178aeeb0ddbca8d855865851aa4ec3e 225 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 8 213 7.6E-56 T 12-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain M634_07260 3cd22e08fd674eb53e4dbf06352a574e 35 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 30 1.1E-20 T 12-10-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 M634_07260 3cd22e08fd674eb53e4dbf06352a574e 35 Pfam PF08173 Membrane bound YbgT-like protein 1 27 1.3E-17 T 12-10-2018 IPR012994 Membrane bound YbgT-like M634_06485 1e9afbe002c9f4c5ca79e786f786e9f2 86 SUPERFAMILY SSF47336 5 85 9.29E-14 T 12-10-2018 IPR036736 ACP-like superfamily M634_06485 1e9afbe002c9f4c5ca79e786f786e9f2 86 Pfam PF00550 Phosphopantetheine attachment site 8 80 2.8E-9 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain M634_06485 1e9afbe002c9f4c5ca79e786f786e9f2 86 Gene3D G3DSA:1.10.1200.10 3 86 6.1E-21 T 12-10-2018 IPR036736 ACP-like superfamily M634_11840 8987c3a52c9e43ed334a8a9372fe385f 323 Pfam PF03916 Polysulphide reductase, NrfD 6 322 7.2E-78 T 12-10-2018 IPR005614 NrfD family M634_11840 8987c3a52c9e43ed334a8a9372fe385f 323 TIGRFAM TIGR03148 cyt_nit_nrfD: cytochrome c nitrite reductase, NrfD subunit 6 323 4.0E-147 T 12-10-2018 IPR017566 NrfD M634_06465 3c02b83f3283a64694d84cd15371b95d 122 PIRSF PIRSF030962 1 122 4.5E-49 T 12-10-2018 IPR016962 Dehydrase, ECs4332, predicted KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 M634_06465 3c02b83f3283a64694d84cd15371b95d 122 SUPERFAMILY SSF54637 12 107 1.94E-15 T 12-10-2018 IPR029069 HotDog domain superfamily M634_06465 3c02b83f3283a64694d84cd15371b95d 122 Gene3D G3DSA:3.10.129.10 3 122 1.7E-33 T 12-10-2018 M634_24380 a290d5c21c8f8dce05751b912b81c649 199 Gene3D G3DSA:3.80.10.10 22 196 1.2E-6 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily M634_03205 b95a25f5633231d84fc45f61a1898b84 140 Pfam PF05656 Protein of unknown function (DUF805) 8 139 5.3E-20 T 12-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 M634_23890 40ab7e02086f4ed9691e3125f872bb52 103 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 2 100 2.4E-24 T 12-10-2018 IPR008407 Branched-chain amino acid transport, AzlD M634_10855 fe09dc1479b5d9389415c4d8370f221b 81 Pfam PF10387 Protein of unknown function (DUF2442) 6 79 6.8E-9 T 12-10-2018 IPR018841 Protein of unknown function DUF2442 M634_10855 fe09dc1479b5d9389415c4d8370f221b 81 SUPERFAMILY SSF143880 4 67 1.06E-6 T 12-10-2018 IPR036782 NE0471-like, N-terminal M634_09045 00f494c288617b9e8be7aea9f061d629 237 Pfam PF06578 YOP proteins translocation protein K (YscK) 26 237 5.0E-88 T 12-10-2018 IPR009510 Type III secretion system, secretion protein K GO:0009405 M634_09045 00f494c288617b9e8be7aea9f061d629 237 ProDom PD023059 PLASMID TYPE PROTEINS YOP III YSCK VIRULENCE K TRANSLOCATION PSCK 30 236 8.0E-119 T 12-10-2018 IPR009510 Type III secretion system, secretion protein K GO:0009405 M634_12830 036d82cb29b663d3e81f3a2f852801da 441 Pfam PF13726 Na+-H+ antiporter family 2 88 9.9E-36 T 12-10-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal M634_12830 036d82cb29b663d3e81f3a2f852801da 441 PRINTS PR00173 Glutamate-aspartate symporter signature 20 40 1.5E-6 T 12-10-2018 M634_12830 036d82cb29b663d3e81f3a2f852801da 441 PRINTS PR00173 Glutamate-aspartate symporter signature 374 393 1.5E-6 T 12-10-2018 M634_12830 036d82cb29b663d3e81f3a2f852801da 441 Pfam PF03553 Na+/H+ antiporter family 150 435 3.3E-75 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 M634_13305 1659556be09b1df1311e55d41522c9f4 134 PIRSF PIRSF016789 8 129 1.6E-41 T 12-10-2018 IPR007401 Protein of unknown function DUF454 M634_13305 1659556be09b1df1311e55d41522c9f4 134 Pfam PF04304 Protein of unknown function (DUF454) 9 122 8.1E-38 T 12-10-2018 IPR007401 Protein of unknown function DUF454 M634_04050 d5ee8f466d1dc26caef7374b3eccafbc 147 Pfam PF06853 Protein of unknown function (DUF1249) 27 139 2.4E-38 T 12-10-2018 IPR009659 Protein of unknown function DUF1249 M634_16715 67b8da02f5343a77547b20e68db567f2 66 SUPERFAMILY SSF116734 10 52 2.29E-5 T 12-10-2018 M634_04265 9fd793e9916f6e6d9971af5242d69daa 259 Pfam PF01925 Sulfite exporter TauE/SafE 11 246 3.3E-42 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 M634_23220 9780eeaea0638163277fd935a228a36a 418 Pfam PF03222 Tryptophan/tyrosine permease family 30 406 1.1E-16 T 12-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 M634_01410 95ee3dffb351e615145da3d66544464d 204 Pfam PF03942 DTW domain 5 183 1.3E-42 T 12-10-2018 IPR005636 DTW M634_01410 95ee3dffb351e615145da3d66544464d 204 SMART SM01144 1 192 1.3E-54 T 12-10-2018 IPR005636 DTW M634_13170 d0e010b2a494b3cbb8429488095c5ff3 95 Pfam PF04606 Ogr/Delta-like zinc finger 20 62 2.0E-11 T 12-10-2018 IPR007684 Zinc finger, Ogr/Delta-type M634_13505 a256e6be9b8e9ee594674b31033cf068 247 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 228 1.7E-85 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 M634_13505 a256e6be9b8e9ee594674b31033cf068 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 3.8E-65 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 M634_13505 a256e6be9b8e9ee594674b31033cf068 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 3.8E-65 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 M634_13505 a256e6be9b8e9ee594674b31033cf068 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 3.8E-65 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 M634_13505 a256e6be9b8e9ee594674b31033cf068 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 3.8E-65 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 M634_13505 a256e6be9b8e9ee594674b31033cf068 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 204 228 3.8E-65 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 M634_13505 a256e6be9b8e9ee594674b31033cf068 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 3.8E-65 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 M634_13505 a256e6be9b8e9ee594674b31033cf068 247 Pfam PF01578 Cytochrome C assembly protein 29 184 1.6E-32 T 12-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 M634_23775 959d5e07a3a1b09fe3420be951fca513 97 Pfam PF03889 Domain of unknown function 22 59 5.7E-22 T 12-10-2018 IPR005589 Alternative ribosome-rescue factor A GO:0072344 M634_03155 a377739b09d38403a32e13e33b53cba1 199 Pfam PF02397 Bacterial sugar transferase 3 177 2.6E-64 T 12-10-2018 IPR003362 Bacterial sugar transferase M634_16750 80d4d1019c7bfaef57b6a90a79980f7c 547 Pfam PF13584 Oxygen tolerance 16 448 4.8E-74 T 12-10-2018 IPR025738 Aerotolerance-related protein BatD M634_09915 19551a27bd6366571d66463f5758e7ad 114 Pfam PF12290 Protein of unknown function (DUF3802) 2 110 1.6E-43 T 12-10-2018 IPR020979 Uncharacterised protein family A0KLC6 M634_07810 c9aba226bf835c2c94c76069ab18e881 188 Pfam PF03352 Methyladenine glycosylase 9 184 2.0E-72 T 12-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 M634_07810 c9aba226bf835c2c94c76069ab18e881 188 Gene3D G3DSA:1.10.340.30 4 188 7.6E-76 T 12-10-2018 M634_07810 c9aba226bf835c2c94c76069ab18e881 188 SUPERFAMILY SSF48150 5 186 1.41E-73 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 M634_16450 00115659aa2a0c964b720a56ccb7bc87 229 Gene3D G3DSA:1.10.10.10 163 219 3.3E-5 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily M634_16450 00115659aa2a0c964b720a56ccb7bc87 229 Pfam PF08722 TnsA endonuclease N terminal 65 139 4.2E-11 T 12-10-2018 IPR014833 TnsA endonuclease, N-terminal M634_11325 35744ae451eaeeecd1961c119046b189 159 Pfam PF13274 Protein of unknown function (DUF4065) 27 121 2.2E-21 T 12-10-2018 IPR025272 Domain of unknown function DUF4065 M634_16535 47a8eee626330fa85deeae3adea039bf 435 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 349 431 6.5E-8 T 12-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain M634_16535 47a8eee626330fa85deeae3adea039bf 435 Pfam PF01943 Polysaccharide biosynthesis protein 28 297 5.4E-14 T 12-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 M634_05790 3c0df60e1299bb093e3c235b08c5b59e 230 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 83 204 1.6E-6 T 12-10-2018 IPR009331 Oligogalacturonate-specific porin M634_05790 3c0df60e1299bb093e3c235b08c5b59e 230 Gene3D G3DSA:2.40.160.40 36 230 6.7E-13 T 12-10-2018 M634_09195 6cfe4c58b526880de9d641aab5c68711 256 Pfam PF01925 Sulfite exporter TauE/SafE 8 249 3.7E-37 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 M634_03500 5d09457d87c3c7da3962b5269d1681d1 212 Pfam PF10986 Protein of unknown function (DUF2796) 29 207 7.7E-50 T 12-10-2018 IPR021253 Protein of unknown function DUF2796 M634_04285 3a24a44bc464c5e73e704333388b7245 317 Pfam PF03186 CobD/Cbib protein 19 283 1.0E-31 T 12-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 M634_11605 c64b60d8f6982db6ff962c045fd8b207 101 SUPERFAMILY SSF52309 1 91 6.87E-16 T 12-10-2018 M634_11605 c64b60d8f6982db6ff962c045fd8b207 101 Pfam PF14359 Domain of unknown function (DUF4406) 3 89 1.6E-21 T 12-10-2018 IPR025518 Protein of unknown function DUF4406 M634_11605 c64b60d8f6982db6ff962c045fd8b207 101 Gene3D G3DSA:3.40.50.450 1 97 3.0E-6 T 12-10-2018 M634_21710 87d3f8cd9ff32b264faebc8f6804ae13 455 SUPERFAMILY SSF56219 33 451 6.84E-15 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily M634_21710 87d3f8cd9ff32b264faebc8f6804ae13 455 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 38 446 2.7E-26 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase M634_09800 98a7e188c12962e3400cd509c6dda130 209 Pfam PF11748 Protein of unknown function (DUF3306) 4 120 2.1E-27 T 12-10-2018 IPR021735 Protein of unknown function DUF3306 M634_23305 89d93ce705de988f87ef6c0ead16958a 106 SUPERFAMILY SSF143410 1 102 7.32E-34 T 12-10-2018 IPR023389 DOPA-like superfamily M634_23305 89d93ce705de988f87ef6c0ead16958a 106 Gene3D G3DSA:3.30.70.1240 1 104 8.6E-30 T 12-10-2018 IPR023389 DOPA-like superfamily M634_23305 89d93ce705de988f87ef6c0ead16958a 106 PIRSF PIRSF028139 1 106 8.9E-43 T 12-10-2018 IPR014980 Dopa 4,5-dioxygenase M634_23305 89d93ce705de988f87ef6c0ead16958a 106 Pfam PF08883 Dopa 4,5-dioxygenase family 2 99 1.4E-28 T 12-10-2018 IPR014980 Dopa 4,5-dioxygenase M634_11900 eb71989768140c9f9912f9e8702820f1 326 Pfam PF13084 Domain of unknown function (DUF3943) 163 272 1.5E-37 T 12-10-2018 IPR025079 Domain of unknown function DUF3943 M634_05550 c838035ff294595391f79e160b558804 156 Pfam PF07295 Zinc-ribbon containing domain 14 152 4.4E-47 T 12-10-2018 IPR009912 Zinc-ribbon containing domain M634_05165 2e38f6fae1a7233b9b951f323ba84437 396 Pfam PF11301 Protein of unknown function (DUF3103) 40 394 2.3E-180 T 12-10-2018 IPR021452 Protein of unknown function DUF3103 M634_18575 106ee917a2fbc1c15618ac3e0cfccb8b 81 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 1 80 2.7E-28 T 12-10-2018 IPR009778 Modulator of Rho-dependent transcription termination M634_18575 106ee917a2fbc1c15618ac3e0cfccb8b 81 Gene3D G3DSA:2.30.30.400 2 79 1.3E-15 T 12-10-2018 IPR038626 Rof-like superfamily M634_18575 106ee917a2fbc1c15618ac3e0cfccb8b 81 SUPERFAMILY SSF101744 1 80 1.1E-21 T 12-10-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 M634_04345 ff0828ee0c05ebbadd315cc72a09e236 135 Pfam PF11697 Protein of unknown function (DUF3293) 36 105 3.2E-19 T 12-10-2018 IPR021710 Protein of unknown function DUF3293 M634_21575 129d402188a0e17a2c4c6dc8e28482de 304 Pfam PF00482 Type II secretion system (T2SS), protein F 137 261 7.1E-18 T 12-10-2018 IPR018076 Type II secretion system F domain M634_21575 129d402188a0e17a2c4c6dc8e28482de 304 Gene3D G3DSA:1.20.81.30 129 241 3.9E-5 T 12-10-2018 M634_01445 72c76b5bcc047186906099d33f9202e3 38 Pfam PF13627 Prokaryotic lipoprotein-attachment site 6 28 2.1E-9 T 12-10-2018 IPR032831 Prokaryotic lipoprotein-attachment site M634_18270 a0e33ae370bb8ad36d730dcf1e45faac 422 Pfam PF02687 FtsX-like permease family 315 411 5.4E-10 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 M634_18270 a0e33ae370bb8ad36d730dcf1e45faac 422 Pfam PF12704 MacB-like periplasmic core domain 23 247 2.3E-15 T 12-10-2018 IPR025857 MacB-like periplasmic core domain M634_02035 79f394008a2bc7309eb7c7ad2b219ca6 268 Pfam PF07070 SpoOM protein 4 219 4.0E-77 T 12-10-2018 IPR009776 Sporulation stage 0, protein M M634_09610 a14767708335afdb128dbd5496ce4387 54 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 7.5E-21 T 12-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type M634_09610 a14767708335afdb128dbd5496ce4387 54 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 50 2.0E-17 T 12-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type M634_20310 c5c15b3b8552f73a53c3bbe526967d66 148 Pfam PF11911 Protein of unknown function (DUF3429) 7 146 1.9E-26 T 12-10-2018 IPR021836 Protein of unknown function DUF3429 M634_02305 6bc77d413a8b1cbac0b27b316549c104 134 SUPERFAMILY SSF103481 6 108 2.75E-14 T 12-10-2018 M634_02305 6bc77d413a8b1cbac0b27b316549c104 134 Gene3D G3DSA:1.10.3730.20 4 110 2.7E-28 T 12-10-2018 M634_02305 6bc77d413a8b1cbac0b27b316549c104 134 Pfam PF00893 Small Multidrug Resistance protein 6 94 5.0E-19 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 M634_09285 2ed6c366ea54cf78b6b2e048b2c01d82 117 Pfam PF11042 Protein of unknown function (DUF2750) 13 113 2.0E-33 T 12-10-2018 IPR021284 Protein of unknown function DUF2750 M634_17315 46e366140088802de8146368d7194009 724 Pfam PF04632 Fusaric acid resistance protein family 6 524 8.1E-42 T 12-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 M634_07715 9f657ac1a0e1a4621841f78ed9ef2748 59 Pfam PF06796 Periplasmic nitrate reductase protein NapE 5 55 3.4E-24 T 12-10-2018 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE M634_07715 9f657ac1a0e1a4621841f78ed9ef2748 59 TIGRFAM TIGR02972 TMAO_torE: trimethylamine N-oxide reductase system, TorE protein 8 57 5.6E-28 T 12-10-2018 IPR014316 Trimethylamine N-oxide reductase system, TorE M634_05110 36f77b5d024a6590e4338444339f3557 279 Pfam PF05853 beta-keto acid cleavage enzyme 11 278 6.6E-58 T 12-10-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247 M634_05110 36f77b5d024a6590e4338444339f3557 279 Gene3D G3DSA:3.20.20.70 4 279 3.0E-59 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 M634_20590 76a0783b2889cf9eb6ea94256aaef799 287 PIRSF PIRSF028200 12 287 6.0E-103 T 12-10-2018 IPR016875 Uncharacterised conserved protein UCP028200 M634_12305 b2131cfd6730577d03e853e6cb252bab 249 Gene3D G3DSA:3.90.550.10 2 240 1.4E-36 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M634_12305 b2131cfd6730577d03e853e6cb252bab 249 Pfam PF00535 Glycosyl transferase family 2 6 120 2.5E-25 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 M634_12305 b2131cfd6730577d03e853e6cb252bab 249 SUPERFAMILY SSF53448 1 232 5.63E-43 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases M634_19130 60a9452d9a15b4021227b05a80e3a73c 1281 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 212 388 1.4E-10 T 12-10-2018 IPR000477 Reverse transcriptase domain M634_19130 60a9452d9a15b4021227b05a80e3a73c 1281 SUPERFAMILY SSF56317 1054 1244 3.79E-5 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily M634_08300 859a99a95af357e5fe8b83c5b11a41c8 247 Pfam PF07070 SpoOM protein 2 215 4.7E-63 T 12-10-2018 IPR009776 Sporulation stage 0, protein M M634_02255 5569591b569a2244bbf20d8610430fc7 361 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 149 354 1.1E-39 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_02255 5569591b569a2244bbf20d8610430fc7 361 SUPERFAMILY SSF161098 126 338 1.31E-17 T 12-10-2018 IPR035906 MetI-like superfamily M634_02255 5569591b569a2244bbf20d8610430fc7 361 Gene3D G3DSA:1.10.3720.10 120 350 5.2E-20 T 12-10-2018 IPR035906 MetI-like superfamily M634_12295 f24048647d851fe10a2095a7baab1b19 574 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 74 233 3.6E-11 T 12-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like M634_07590 5666af6e2a5c480fab03d03926c5c250 533 Pfam PF03553 Na+/H+ antiporter family 165 497 8.6E-109 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 M634_15750 25c3242acc03122b0688a67d575a2e5e 356 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 354 1.2E-132 T 12-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 M634_15750 25c3242acc03122b0688a67d575a2e5e 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 8 354 3.9E-70 T 12-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 M634_10400 8ee21bf5be296db6da85bd012d94036e 248 SUPERFAMILY SSF52317 5 246 1.1E-38 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M634_10400 8ee21bf5be296db6da85bd012d94036e 248 Gene3D G3DSA:3.40.50.880 4 248 7.8E-63 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like M634_10400 8ee21bf5be296db6da85bd012d94036e 248 Pfam PF07722 Peptidase C26 7 226 3.4E-70 T 12-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 M634_05980 c9829a790b47f1b2cf8b21973897d249 247 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 7 247 28.146 T 12-10-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 M634_05980 c9829a790b47f1b2cf8b21973897d249 247 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 13 229 3.0E-40 T 12-10-2018 M634_17290 c6ff8fee51175b8b7bb574894301504d 156 Gene3D G3DSA:3.40.630.30 2 155 2.8E-22 T 12-10-2018 M634_17290 c6ff8fee51175b8b7bb574894301504d 156 SUPERFAMILY SSF55729 1 152 1.32E-20 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_17290 c6ff8fee51175b8b7bb574894301504d 156 Pfam PF00583 Acetyltransferase (GNAT) family 39 134 5.3E-10 T 12-10-2018 IPR000182 GNAT domain M634_11590 bf1dc10ac65734a2a9291f4b667af191 269 Pfam PF02498 BRO family, N-terminal domain 15 110 1.0E-22 T 12-10-2018 IPR003497 BRO N-terminal domain M634_11590 bf1dc10ac65734a2a9291f4b667af191 269 SMART SM01040 13 110 5.6E-23 T 12-10-2018 IPR003497 BRO N-terminal domain M634_24490 831587b7fdc8d4c796d3f7210640e298 78 Pfam PF13551 Winged helix-turn helix 11 74 5.9E-21 T 12-10-2018 M634_24490 831587b7fdc8d4c796d3f7210640e298 78 SUPERFAMILY SSF48295 21 62 9.94E-5 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 M634_24760 b4d3e58da097d06635db5336b9f596a0 628 Pfam PF00771 FHIPEP family 429 616 2.4E-12 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M634_24760 b4d3e58da097d06635db5336b9f596a0 628 Pfam PF00771 FHIPEP family 26 323 1.5E-108 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M634_24760 b4d3e58da097d06635db5336b9f596a0 628 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 30 43 8.5E-47 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M634_24760 b4d3e58da097d06635db5336b9f596a0 628 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 229 243 8.5E-47 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M634_24760 b4d3e58da097d06635db5336b9f596a0 628 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 148 166 8.5E-47 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M634_24760 b4d3e58da097d06635db5336b9f596a0 628 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 178 195 8.5E-47 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M634_24760 b4d3e58da097d06635db5336b9f596a0 628 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 67 86 8.5E-47 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M634_24760 b4d3e58da097d06635db5336b9f596a0 628 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 129 145 8.5E-47 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 M634_19165 5b69f6b4df77cd5d49b7477968f302c7 485 Gene3D G3DSA:1.10.443.10 194 435 1.6E-14 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 M634_19165 5b69f6b4df77cd5d49b7477968f302c7 485 Pfam PF00589 Phage integrase family 216 431 2.1E-5 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 M634_19165 5b69f6b4df77cd5d49b7477968f302c7 485 SUPERFAMILY SSF56349 213 436 7.95E-18 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 M634_09500 c941fad53bcbd2d59b1c2d77b709643e 103 Pfam PF12321 Protein of unknown function (DUF3634) 2 101 2.2E-43 T 12-10-2018 IPR022090 Protein of unknown function DUF3634 M634_16275 b7290d9a5c996ab5b41ccc7b01e8d06a 84 TIGRFAM TIGR02497 yscI_hrpB_dom: type III secretion apparatus protein, YscI/HrpB, C-terminal domain 49 84 1.4E-6 T 12-10-2018 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 M634_05055 0f13211df1d38cb525325ca3058ca744 196 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 7 16 - T 12-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 M634_05055 0f13211df1d38cb525325ca3058ca744 196 Pfam PF01184 GPR1/FUN34/yaaH family 3 174 9.4E-35 T 12-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 M634_16880 a8dbd1494eba1d6f686332545cfe5cde 279 Pfam PF02361 Cobalt transport protein 17 236 3.4E-32 T 12-10-2018 IPR003339 ABC/ECF transporter, transmembrane component M634_24650 85ccf1dff9fb45b5689e57271d206773 122 Pfam PF13006 Insertion element 4 transposase N-terminal 36 120 1.9E-17 T 12-10-2018 IPR024473 Transposase, IS4, N-terminal M634_18890 53a67ac5c36bb7b0f63ddd8a5df03d5a 276 Pfam PF10670 Domain of unknown function (DUF4198) 24 251 1.4E-50 T 12-10-2018 IPR019613 Protein of unknown function DUF4198 M634_00515 ee9568479a083c373f404a27701cb661 61 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 59 1.4E-23 T 12-10-2018 IPR019201 Protein of unknown function DUF2065 M634_04295 11ae0fa19ab73e21110d99d816785401 142 Pfam PF07386 Protein of unknown function (DUF1499) 30 135 5.6E-25 T 12-10-2018 IPR010865 Protein of unknown function DUF1499 M634_04295 11ae0fa19ab73e21110d99d816785401 142 PIRSF PIRSF026426 1 142 2.6E-50 T 12-10-2018 IPR010865 Protein of unknown function DUF1499 M634_08590 e81b12e81c8fb7eda8a1a73d13dca2f5 426 SUPERFAMILY SSF161098 37 416 3.27E-44 T 12-10-2018 IPR035906 MetI-like superfamily M634_08590 e81b12e81c8fb7eda8a1a73d13dca2f5 426 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 226 412 3.5E-8 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 M634_08590 e81b12e81c8fb7eda8a1a73d13dca2f5 426 Gene3D G3DSA:1.10.3720.10 173 425 2.9E-47 T 12-10-2018 IPR035906 MetI-like superfamily M634_01810 5007badc304a1d694db87dd8f4f04169 138 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 49 119 1.8E-8 T 12-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 M634_01810 5007badc304a1d694db87dd8f4f04169 138 Gene3D G3DSA:3.10.50.30 46 127 6.3E-10 T 12-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 M634_01810 5007badc304a1d694db87dd8f4f04169 138 SUPERFAMILY SSF54534 49 121 1.44E-10 T 12-10-2018 M634_22110 5c97160a99f1f224b68a1b787121f902 218 Pfam PF07947 YhhN family 24 204 8.5E-42 T 12-10-2018 IPR012506 YhhN-like GO:0016021 M634_19750 86ec8de1a1426da48fc0da821574faab 258 Pfam PF06629 MltA-interacting protein MipA 44 258 1.5E-37 T 12-10-2018 IPR010583 MltA-interacting MipA M634_02830 31b6dfdeff52eba56df1887a51c23424 135 Gene3D G3DSA:3.30.420.270 61 129 8.2E-10 T 12-10-2018 M634_02830 31b6dfdeff52eba56df1887a51c23424 135 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 133 2.8E-32 T 12-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 M634_09935 c5ccb96f2d1e84d40dfde27878226057 64 Pfam PF14255 Cysteine-rich CPXCG 9 59 2.4E-21 T 12-10-2018 IPR025990 Cysteine-rich CPXCG protein M634_09935 c5ccb96f2d1e84d40dfde27878226057 64 PIRSF PIRSF037225 1 64 5.3E-24 T 12-10-2018 IPR017143 Uncharacterised conserved protein UCP037225 M634_05740 317b0fd0b44a314178369748273d6e70 269 Pfam PF13369 Transglutaminase-like superfamily 33 184 8.4E-45 T 12-10-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 M634_05740 317b0fd0b44a314178369748273d6e70 269 SUPERFAMILY SSF48452 191 255 2.76E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_05740 317b0fd0b44a314178369748273d6e70 269 Pfam PF13371 Tetratricopeptide repeat 187 259 3.4E-23 T 12-10-2018 M634_07925 6e85094f4febf4cc446ca65330080d73 148 Pfam PF03724 META domain 34 141 7.5E-28 T 12-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ M634_07925 6e85094f4febf4cc446ca65330080d73 148 Gene3D G3DSA:2.40.128.270 40 143 5.2E-29 T 12-10-2018 IPR038670 HslJ-like superfamily M634_01470 f4d740a720deb2fd6eb8b140158c5ae6 403 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 63 391 1.6E-107 T 12-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX M634_06075 c39e2c8591248b3c36716ef47e922cc0 244 Pfam PF07556 Protein of unknown function (DUF1538) 21 241 4.6E-72 T 12-10-2018 IPR011435 Protein of unknown function DUF1538 M634_13680 689e96c04e0c6852ca86fe8f9a99ef75 666 Pfam PF07196 Flagellin hook IN motif 125 177 3.3E-6 T 12-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 M634_13680 689e96c04e0c6852ca86fe8f9a99ef75 666 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 431 655 1.0E-57 T 12-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 M634_13680 689e96c04e0c6852ca86fe8f9a99ef75 666 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 107 6.9E-21 T 12-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 M634_03540 4d69c34306956ab89094b810345789c1 120 Pfam PF10973 Protein of unknown function (DUF2799) 29 112 4.4E-19 T 12-10-2018 IPR021242 Protein of unknown function DUF2799 M634_10485 fc64530cf34bf9936bdadcc628e287ce 70 Pfam PF07869 Protein of unknown function (DUF1656) 7 61 2.2E-15 T 12-10-2018 IPR012451 Protein of unknown function DUF1656 M634_24540 28520a3d9ca442409c4e21d297eeaa23 306 Pfam PF13737 Transposase DDE domain 19 129 5.2E-45 T 12-10-2018 IPR025668 Transposase DDE domain M634_12855 7f2aa4ce448df1b2c2f10bc576a45d61 247 Gene3D G3DSA:3.40.50.720 21 240 1.9E-20 T 12-10-2018 M634_12855 7f2aa4ce448df1b2c2f10bc576a45d61 247 Pfam PF00106 short chain dehydrogenase 27 211 3.1E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR M634_12855 7f2aa4ce448df1b2c2f10bc576a45d61 247 SUPERFAMILY SSF51735 20 210 1.86E-20 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily M634_17045 a6ba3c3633e2d21dd71c077ff56fcbbe 227 Gene3D G3DSA:2.60.40.2130 26 168 1.3E-12 T 12-10-2018 IPR038678 Spondin, N-terminal domain superfamily Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 M634_17045 a6ba3c3633e2d21dd71c077ff56fcbbe 227 Pfam PF06468 Spondin_N 40 157 4.7E-10 T 12-10-2018 IPR009465 Spondin, N-terminal Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 M634_05265 8cc503398290b26f0ebbfb37f3c6401e 179 Pfam PF11810 Domain of unknown function (DUF3332) 7 175 1.3E-41 T 12-10-2018 IPR021768 Protein of unknown function DUF3332 M634_22195 f97ae050921968b95958301bc9eb7af7 80 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 2 75 2.7E-27 T 12-10-2018 IPR018680 Protein of unknown function DUF2164 M634_19455 222459c6389dee6929c8fc879c966656 86 Pfam PF03891 Domain of unknown function (DUF333) 34 78 9.0E-18 T 12-10-2018 IPR005590 Protein of unknown function DUF333 M634_07130 ff7c404ffc658502291838718ff45030 106 Pfam PF09413 Putative prokaryotic signal transducing protein 2 68 5.3E-6 T 12-10-2018 IPR018551 Domain of unknown function DUF2007 M634_07130 ff7c404ffc658502291838718ff45030 106 ProSitePatterns PS01358 Zinc finger RanBP2-type signature. 80 99 - T 12-10-2018 IPR001876 Zinc finger, RanBP2-type M634_23630 8ec37e408d0be734de28b57fbf15a6f5 71 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 15 68 1.0E-12 T 12-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor M634_23630 8ec37e408d0be734de28b57fbf15a6f5 71 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 4 68 1.9E-30 T 12-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor M634_15505 b9c733cc32cf84337266bc1e6ea91e01 185 Pfam PF02325 YGGT family 109 173 1.4E-18 T 12-10-2018 IPR003425 CCB3/YggT GO:0016020 M634_15505 b9c733cc32cf84337266bc1e6ea91e01 185 Pfam PF02325 YGGT family 10 77 2.2E-19 T 12-10-2018 IPR003425 CCB3/YggT GO:0016020 M634_19560 6da81dfd330e0cf0f4c716b7ce2e3017 87 Pfam PF11216 Protein of unknown function (DUF3012) 56 87 7.9E-21 T 12-10-2018 IPR021379 Protein of unknown function DUF3012 M634_19560 6da81dfd330e0cf0f4c716b7ce2e3017 87 Pfam PF11216 Protein of unknown function (DUF3012) 21 52 3.1E-19 T 12-10-2018 IPR021379 Protein of unknown function DUF3012 M634_24675 045a29ef636ef6b386cbcaf95f9638d5 125 SUPERFAMILY SSF69635 12 118 4.47E-6 T 12-10-2018 M634_13390 4873e4eb32ee3daca5435a0f3d33135e 176 Pfam PF04315 Elongation factor P hydroxylase 11 172 9.5E-73 T 12-10-2018 IPR007411 Elongation factor P hydroxylase M634_15395 23b7b47d241cdea4d39a9fd97990f09d 209 Pfam PF01810 LysE type translocator 15 202 1.4E-43 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 M634_21685 c28a3bec0d7922f9a5c6b58f6e725af0 240 Pfam PF01925 Sulfite exporter TauE/SafE 11 230 3.7E-25 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 M634_13480 1e3e613abe17e38b1667cf42f630872c 161 Gene3D G3DSA:1.10.8.640 20 105 2.3E-36 T 12-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily M634_13480 1e3e613abe17e38b1667cf42f630872c 161 Pfam PF03918 Cytochrome C biogenesis protein 9 152 4.4E-55 T 12-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family M634_24090 4cca53c655c167b5d1913e220569f2c8 366 Pfam PF12698 ABC-2 family transporter protein 25 357 1.4E-45 T 12-10-2018 M634_24090 4cca53c655c167b5d1913e220569f2c8 366 PRINTS PR00164 ABC-2 type transport system membrane protein signature 251 275 6.0E-7 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 M634_24090 4cca53c655c167b5d1913e220569f2c8 366 PRINTS PR00164 ABC-2 type transport system membrane protein signature 288 307 6.0E-7 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 M634_24090 4cca53c655c167b5d1913e220569f2c8 366 PRINTS PR00164 ABC-2 type transport system membrane protein signature 308 327 6.0E-7 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 M634_22830 c3989e36bd94c9dc0440ee50b281be92 282 Gene3D G3DSA:1.20.1080.10 2 251 1.7E-62 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 M634_22830 c3989e36bd94c9dc0440ee50b281be92 282 Pfam PF01226 Formate/nitrite transporter 9 258 3.0E-58 T 12-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 M634_05390 327dfb4b237d84f9e786b2770cdfc6a7 132 Pfam PF04241 Protein of unknown function (DUF423) 20 110 2.1E-28 T 12-10-2018 IPR006696 Protein of unknown function DUF423 M634_05205 41041c483d0f24f178adbd4c0e12d2fb 196 PIRSF PIRSF004525 3 196 1.2E-14 T 12-10-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted M634_07995 1171c786d2a80b3d3bf5b6009eb5e633 219 Pfam PF11140 Protein of unknown function (DUF2913) 3 214 6.7E-85 T 12-10-2018 IPR021316 Protein of unknown function DUF2913 M634_13210 98d6f0be9ff101dd3ef0457fe9eaa560 149 Pfam PF06892 Phage regulatory protein CII (CP76) 1 139 9.2E-40 T 12-10-2018 IPR009679 Bacteriophage 186, CII M634_13725 db25e19ed01cf212da255c21a1976201 110 Pfam PF13698 Domain of unknown function (DUF4156) 24 108 6.5E-24 T 12-10-2018 IPR025294 Protein of unknown function DUF4156 M634_12300 f258869fa8a6479d2f62cb31a93e6483 222 Pfam PF09335 SNARE associated Golgi protein 62 177 4.6E-18 T 12-10-2018 IPR032816 SNARE associated Golgi protein M634_10005 f9a7b952f6a57d492615d268a5a3bf4e 476 Pfam PF01943 Polysaccharide biosynthesis protein 7 268 8.5E-12 T 12-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 M634_03210 d307077290fcec3436ac203f67d1a483 112 Pfam PF11333 Protein of unknown function (DUF3135) 12 91 5.7E-35 T 12-10-2018 IPR021482 Protein of unknown function DUF3135 M634_02405 edbd6cf31789284535e711f840f7ecc4 183 Pfam PF04972 BON domain 115 182 6.8E-16 T 12-10-2018 IPR007055 BON domain M634_02405 edbd6cf31789284535e711f840f7ecc4 183 Pfam PF04972 BON domain 33 99 1.0E-17 T 12-10-2018 IPR007055 BON domain M634_02405 edbd6cf31789284535e711f840f7ecc4 183 SMART SM00749 37 100 42.0 T 12-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria M634_02405 edbd6cf31789284535e711f840f7ecc4 183 SMART SM00749 120 183 0.0048 T 12-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria M634_05010 a1a042c1c4a6eed865e08c9ac2189e3b 78 TIGRFAM TIGR04359 TrbK_RP4: entry exclusion lipoprotein TrbK 9 77 7.1E-11 T 12-10-2018 IPR027584 Entry exclusion lipoprotein TrbK M634_22145 7e15723ee2444b0d79fd9b79f231afd6 157 Pfam PF05981 CreA protein 22 144 1.3E-44 T 12-10-2018 IPR010292 Uncharacterised protein family CreA M634_22145 7e15723ee2444b0d79fd9b79f231afd6 157 PIRSF PIRSF003174 1 155 4.9E-50 T 12-10-2018 IPR010292 Uncharacterised protein family CreA M634_08160 5f4870eb3ff8b7cfa743cb95377bf1bc 219 Gene3D G3DSA:2.60.120.620 1 216 3.2E-54 T 12-10-2018 M634_08160 5f4870eb3ff8b7cfa743cb95377bf1bc 219 Pfam PF10014 2OG-Fe dioxygenase 25 209 1.5E-54 T 12-10-2018 IPR018724 2OG-Fe dioxygenase M634_01365 f576f4545dab4556d9d7b335e7802280 164 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 109 119 - T 12-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 M634_01365 f576f4545dab4556d9d7b335e7802280 164 SUPERFAMILY SSF52799 13 161 6.8E-32 T 12-10-2018 IPR029021 Protein-tyrosine phosphatase-like M634_01365 f576f4545dab4556d9d7b335e7802280 164 Gene3D G3DSA:3.90.190.10 5 164 1.3E-31 T 12-10-2018 IPR029021 Protein-tyrosine phosphatase-like M634_01365 f576f4545dab4556d9d7b335e7802280 164 Pfam PF05706 Cyclin-dependent kinase inhibitor 3 (CDKN3) 19 128 1.1E-9 T 12-10-2018 IPR022778 CDKN3 domain GO:0004721|GO:0004725 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 M634_14290 221d58badd8fd220e4f8d703d1e2d751 98 Gene3D G3DSA:1.10.10.710 21 93 1.1E-7 T 12-10-2018 IPR038627 YebG-like superfamily M634_14290 221d58badd8fd220e4f8d703d1e2d751 98 Pfam PF07130 YebG protein 1 72 1.8E-31 T 12-10-2018 IPR009813 Uncharacterised protein family YebG M634_04275 314fc721af5109515e83594631336930 206 Pfam PF03458 UPF0126 domain 95 166 5.5E-19 T 12-10-2018 IPR005115 Uncharacterised domain UPF0126 M634_04275 314fc721af5109515e83594631336930 206 Pfam PF03458 UPF0126 domain 8 81 4.7E-22 T 12-10-2018 IPR005115 Uncharacterised domain UPF0126 M634_18440 ce97b8e5b30965996e31aa764bdb1004 167 Pfam PF11012 Protein of unknown function (DUF2850) 59 137 7.6E-30 T 12-10-2018 IPR021271 Protein of unknown function DUF2850 M634_02620 a414d6a11424af8b6d2bf1f9ca33b8b0 213 Pfam PF11172 Protein of unknown function (DUF2959) 13 210 1.6E-90 T 12-10-2018 IPR021342 Protein of unknown function DUF2959 M634_10130 224a9e1e4238cb7e119dcc21fe3b2554 210 Pfam PF10816 Domain of unknown function (DUF2760) 87 209 2.0E-54 T 12-10-2018 IPR021212 Domain of unknown function DUF2760 M634_18210 43de4c152bae2ac841e03a2ee7ff1016 656 Pfam PF11826 Protein of unknown function (DUF3346) 290 514 2.9E-141 T 12-10-2018 IPR021781 Protein of unknown function DUF3346 M634_07390 b4e8b805395776c1c0856c3eb25854e8 329 Pfam PF03547 Membrane transport protein 175 318 1.0E-13 T 12-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 M634_16540 6e63346ca705bc9baeb692db64308c62 133 Pfam PF04892 VanZ like family 40 121 6.4E-9 T 12-10-2018 IPR006976 VanZ-like M634_16440 0e2cb4419dbbe3f7d4bc4aa7fe606e9b 331 SUPERFAMILY SSF52540 42 272 1.82E-22 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase M634_16440 0e2cb4419dbbe3f7d4bc4aa7fe606e9b 331 Pfam PF05621 Bacterial TniB protein 15 265 4.7E-41 T 12-10-2018 IPR008868 Bacterial TniB M634_16440 0e2cb4419dbbe3f7d4bc4aa7fe606e9b 331 Gene3D G3DSA:3.40.50.300 22 196 8.2E-18 T 12-10-2018 M634_22675 4d7be7cebb75c40e3230d3f26a79a8b4 139 Pfam PF04143 Sulphur transport 5 126 3.7E-10 T 12-10-2018 IPR007272 Sulphur transport domain M634_11005 591f3cd3accab9813f7aa54ab8041ff7 169 Gene3D G3DSA:1.25.40.10 74 168 2.1E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 M634_23840 f1c18b2a2e9699f73f16dbafdc433a23 65 Pfam PF11137 Protein of unknown function (DUF2909) 1 58 6.5E-19 T 12-10-2018 IPR021313 Protein of unknown function DUF2909 M634_19015 0de6c5abd9656a390cd89866234a8315 375 Pfam PF13729 F plasmid transfer operon, TraF, protein 47 292 4.5E-62 T 12-10-2018 IPR032811 Putative conjugal transfer protein TraF-related M634_10860 4d9b2b3474d1cf5fb73cf5b26c29f911 106 Pfam PF13711 Domain of unknown function (DUF4160) 9 79 1.2E-14 T 12-10-2018 IPR025427 Protein of unknown function DUF4160 M634_03995 afd5db9dd2c125e62c827e1a61f3a9b0 227 Pfam PF16537 Type II secretion system protein B 162 221 5.8E-25 T 12-10-2018 IPR032389 Type II secretion system protein B M634_06410 3da958e6c46039c61bbaea7f1a8e9d34 563 Pfam PF13395 HNH endonuclease 454 492 7.7E-5 T 12-10-2018 IPR003615 HNH nuclease M634_06410 3da958e6c46039c61bbaea7f1a8e9d34 563 SUPERFAMILY SSF53335 7 168 1.86E-26 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase M634_06410 3da958e6c46039c61bbaea7f1a8e9d34 563 Pfam PF13489 Methyltransferase domain 35 169 1.7E-11 T 12-10-2018 M634_06410 3da958e6c46039c61bbaea7f1a8e9d34 563 Gene3D G3DSA:3.40.50.150 1 195 9.0E-25 T 12-10-2018 M634_19525 3141d1e0e4fe0ebf6baa6b95e7516cd5 179 Pfam PF10135 Rod binding protein 54 104 4.8E-12 T 12-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal M634_09405 d0c86e7e4602fc531d44d7b7dfebdc92 882 Pfam PF02470 MlaD protein 398 463 4.5E-6 T 12-10-2018 IPR003399 Mce/MlaD M634_09405 d0c86e7e4602fc531d44d7b7dfebdc92 882 Pfam PF02470 MlaD protein 47 138 6.1E-13 T 12-10-2018 IPR003399 Mce/MlaD M634_09405 d0c86e7e4602fc531d44d7b7dfebdc92 882 Pfam PF02470 MlaD protein 752 820 1.5E-7 T 12-10-2018 IPR003399 Mce/MlaD M634_09405 d0c86e7e4602fc531d44d7b7dfebdc92 882 Pfam PF02470 MlaD protein 283 356 7.4E-7 T 12-10-2018 IPR003399 Mce/MlaD M634_13085 77a9916311fe8405720f232626743c5d 87 ProDom PD068655 ORF26 3'REGION LYS GENE PRECURSOR ORF30 SIGNAL PHAGE 5 86 2.0E-9 T 12-10-2018 IPR024406 Phage tail assembly chaperone TAC-10 M634_13085 77a9916311fe8405720f232626743c5d 87 Pfam PF10963 Phage tail assembly chaperone 5 87 5.3E-23 T 12-10-2018 IPR024406 Phage tail assembly chaperone TAC-10 M634_20115 8dfec600f20aa11108c3457fd09f657d 390 Pfam PF14321 Domain of unknown function (DUF4382) 76 254 2.4E-21 T 12-10-2018 IPR025491 Domain of unknown function DUF4382 M634_11650 4e4bf118f015bed77344bd48caf1c521 374 Gene3D G3DSA:1.10.150.20 276 355 4.7E-6 T 12-10-2018 M634_11225 99953f8dbdc9fa5568f29ca4c52987ac 157 Pfam PF11163 Protein of unknown function (DUF2947) 3 154 2.6E-72 T 12-10-2018 IPR021334 Protein of unknown function DUF2947 M634_21880 8be998295a902cd00735692baf2aa056 167 Pfam PF11158 Protein of unknown function (DUF2938) 11 158 1.0E-56 T 12-10-2018 IPR021329 Protein of unknown function DUF2938 M634_11460 d43bc10d1c914f0b54a0e6fbdcc293d2 140 Gene3D G3DSA:3.40.960.10 22 133 2.9E-8 T 12-10-2018 M634_22220 0b640d0ec6a9f776a93e76f459304c42 160 Pfam PF06496 Protein of unknown function (DUF1097) 9 141 1.1E-37 T 12-10-2018 IPR009476 Protein of unknown function DUF1097 M634_02895 1a263d57abc3cb0ce8c0ee304b335357 115 Pfam PF04138 GtrA-like protein 4 110 1.6E-11 T 12-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 M634_02835 25b4b38bc266da9b422f96ad7903882a 175 Pfam PF01618 MotA/TolQ/ExbB proton channel family 59 168 2.1E-20 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel M634_23740 cda72ec9f2d6bdbdd0ab18d12f0ea331 405 SUPERFAMILY SSF56935 42 405 4.21E-9 T 12-10-2018 M634_08375 74319d92e323811fee3d1a040b184884 292 Pfam PF03547 Membrane transport protein 145 284 1.5E-6 T 12-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 M634_19115 f73bf447573862cfede921380b8d0f2d 407 SUPERFAMILY SSF110849 103 170 2.44E-7 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily M634_07190 b64c9da87d887cfb722038c13faa78a1 322 SUPERFAMILY SSF56059 36 277 7.69E-20 T 12-10-2018 M634_07190 b64c9da87d887cfb722038c13faa78a1 322 Pfam PF14397 Sugar-transfer associated ATP-grasp 22 294 7.1E-115 T 12-10-2018 IPR039523 Alpha-L-glutamate ligase-related protein, ATP-grasp domain KEGG: 00270+6.3.2.2+6.3.2.3|KEGG: 00480+6.3.2.2+6.3.2.3|MetaCyc: PWY-6840|MetaCyc: PWY-7255 M634_07190 b64c9da87d887cfb722038c13faa78a1 322 TIGRFAM TIGR02291 rimK_rel_E_lig: alpha-L-glutamate ligase homolog 5 320 3.3E-180 T 12-10-2018 IPR011758 Alpha-L-glutamate ligase-related protein M634_09750 e3c1607c93fdd9132766688f5d094840 299 Pfam PF15575 Immunity protein 49 68 283 1.1E-43 T 12-10-2018 IPR029074 Immunity protein 49 M634_17325 65c48d69d0d411a0ce57021f254e3c18 67 Pfam PF07869 Protein of unknown function (DUF1656) 4 58 8.7E-16 T 12-10-2018 IPR012451 Protein of unknown function DUF1656 M634_16350 fa17075241db36e9aea47d9af42e7eaa 306 Pfam PF13737 Transposase DDE domain 19 129 1.7E-43 T 12-10-2018 IPR025668 Transposase DDE domain M634_15710 309309e99af9a0cfabf6d913563be7c5 158 Pfam PF00872 Transposase, Mutator family 6 158 1.2E-36 T 12-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 M634_08910 913f5b203fff4c07472e2d2ad438c31a 383 Pfam PF12698 ABC-2 family transporter protein 22 367 1.2E-40 T 12-10-2018 M634_14165 2792dd0b12bcde33b626e82fd743aac4 189 Pfam PF03923 Uncharacterized lipoprotein 28 186 4.7E-52 T 12-10-2018 IPR005619 Uncharacterised protein family, YajG M634_22685 e15a4df6955c00f9156b88d257b1a2fc 61 Pfam PF11127 Protein of unknown function (DUF2892) 2 56 3.2E-13 T 12-10-2018 IPR021309 Protein of unknown function DUF2892 M634_07265 81b1e126ab672b87e02db89073504a78 65 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 1 62 2.8E-24 T 12-10-2018 IPR011846 Cyd operon protein YbgE M634_07265 81b1e126ab672b87e02db89073504a78 65 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 1 65 3.8E-28 T 12-10-2018 IPR011846 Cyd operon protein YbgE M634_08480 6e9717e38b1de5fdc37bf42fd061fe53 193 Pfam PF07209 Protein of unknown function (DUF1415) 17 185 6.9E-66 T 12-10-2018 IPR009858 Protein of unknown function DUF1415 M634_17965 4443e88c5a5af6712529573cfb7f61ec 171 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 24 155 4.2E-29 T 12-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ M634_24275 bd2ef1f4c2e00cb4f6a7b59e0b049524 184 Pfam PF01292 Prokaryotic cytochrome b561 18 182 4.7E-23 T 12-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 M634_24275 bd2ef1f4c2e00cb4f6a7b59e0b049524 184 SUPERFAMILY SSF81342 19 182 5.18E-24 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 M634_07030 1d716beccaeb0215283f87e8d8cac576 261 Pfam PF01925 Sulfite exporter TauE/SafE 12 251 7.4E-46 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 M634_16990 7bd5348979d04f1510452cdaede4457d 177 Pfam PF05229 Spore Coat Protein U domain 25 174 1.0E-31 T 12-10-2018 IPR007893 Spore coat protein U M634_16990 7bd5348979d04f1510452cdaede4457d 177 SMART SM00972 117 174 0.0079 T 12-10-2018 IPR007893 Spore coat protein U M634_07870 3d30083ca70528ed0e3061c2f58b0fac 159 Pfam PF05433 Glycine zipper 2TM domain 65 105 1.1E-7 T 12-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 M634_22575 686197e973d873449394c27ef14e31d1 329 Pfam PF11557 Solitary outer membrane autotransporter beta-barrel domain 13 328 5.7E-114 T 12-10-2018 IPR021621 Solitary outer membrane autotransporter beta-barrel domain M634_23425 fc3ec69de581967af2311b6ac70c35ee 378 Pfam PF16113 Enoyl-CoA hydratase/isomerase 19 358 7.3E-104 T 12-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 M634_23425 fc3ec69de581967af2311b6ac70c35ee 378 Gene3D G3DSA:3.90.226.10 5 375 9.7E-110 T 12-10-2018 M634_23425 fc3ec69de581967af2311b6ac70c35ee 378 SUPERFAMILY SSF52096 16 340 3.94E-52 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily M634_00225 18f8639373c4ccff1378f68d7700e421 192 Pfam PF05137 Fimbrial assembly protein (PilN) 103 177 9.0E-11 T 12-10-2018 IPR007813 Fimbrial assembly PilN M634_10910 95b159701eb0befc3743980526930c52 260 Pfam PF14337 Domain of unknown function (DUF4393) 70 251 5.8E-14 T 12-10-2018 IPR025506 Protein of unknown function DUF4393 M634_22745 70c24bd44cf321b75d05d7cee24afb0e 520 Pfam PF08811 Protein of unknown function (DUF1800) 41 503 6.7E-94 T 12-10-2018 IPR014917 Protein of unknown function DUF1800 M634_22410 acc76390403dada85514d3a0036c62e5 129 Pfam PF11782 Protein of unknown function (DUF3319) 1 89 3.5E-44 T 12-10-2018 IPR021753 Protein of unknown function DUF3319 M634_22530 6b7fead035375392960e4ee5b4a44b9f 373 Pfam PF13729 F plasmid transfer operon, TraF, protein 49 289 2.1E-67 T 12-10-2018 IPR032811 Putative conjugal transfer protein TraF-related M634_22530 6b7fead035375392960e4ee5b4a44b9f 373 SUPERFAMILY SSF56925 217 342 2.86E-5 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel M634_18680 6d349ab404f9e8f55e3368aafd92210a 156 Pfam PF00583 Acetyltransferase (GNAT) family 37 145 1.4E-16 T 12-10-2018 IPR000182 GNAT domain M634_18680 6d349ab404f9e8f55e3368aafd92210a 156 SUPERFAMILY SSF55729 1 153 5.15E-32 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase M634_18680 6d349ab404f9e8f55e3368aafd92210a 156 Gene3D G3DSA:3.40.630.30 4 156 6.0E-36 T 12-10-2018 M634_21090 b50bde339360da120f98c8a45e804088 213 Pfam PF13645 L,D-transpeptidase catalytic domain 50 211 5.5E-66 T 12-10-2018 IPR032676 Putative L,D-transpeptidase tautomerase M634_11285 25bddb62c860257c1477f2e205a606ab 417 Pfam PF03222 Tryptophan/tyrosine permease family 28 383 1.5E-17 T 12-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 M634_07895 085d14be9fca6f9dc0a6e4e9662dfbde 225 Pfam PF09335 SNARE associated Golgi protein 62 178 2.0E-24 T 12-10-2018 IPR032816 SNARE associated Golgi protein M634_05250 036203cbb998ecf414f7d4b315b44aa6 100 Pfam PF12286 Protein of unknown function (DUF3622) 1 71 2.8E-35 T 12-10-2018 IPR022069 Protein of unknown function DUF3622 M634_13115 9632e5822413350c6bb7fa1b28dd244e 376 Pfam PF10758 Protein of unknown function (DUF2586) 4 367 2.8E-153 T 12-10-2018 IPR019694 Bacteriophage HP1, Orf23 M634_06560 79a00c04a8bcbbe266a593acfb0ef214 224 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 28 180 7.8E-26 T 12-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ M634_12815 f6052482c0bd65097e9bdc0a4aff783f 144 Pfam PF10952 Protein of unknown function (DUF2753) 5 144 2.8E-76 T 12-10-2018 IPR020206 Uncharacterised protein family, VP2110 M634_12815 f6052482c0bd65097e9bdc0a4aff783f 144 ProDom PD087558 YRN2_VIBPA ORF2 VV1184 VV13101 MOTY 3'REGION VC1009 VP2110 1 143 3.0E-72 T 12-10-2018 IPR020206 Uncharacterised protein family, VP2110 M634_17855 8199b82546c7a5695bd16a09d2745bb8 81 Pfam PF11730 Protein of unknown function (DUF3297) 10 80 1.9E-38 T 12-10-2018 IPR021724 Protein of unknown function DUF3297 M634_19725 a852a98f4290c29b8d7f3f0ade9af5ec 172 Pfam PF05433 Glycine zipper 2TM domain 67 108 3.7E-9 T 12-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 M634_17120 f753c50aac9f448488201ec55cdfe281 251 SUPERFAMILY SSF160527 132 241 1.96E-6 T 12-10-2018 M634_17120 f753c50aac9f448488201ec55cdfe281 251 Pfam PF02108 Flagellar assembly protein FliH 106 228 3.3E-29 T 12-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE M634_21245 2a6092d16169c45931b9f2e023ecd326 794 Pfam PF06934 Fatty acid cis/trans isomerase (CTI) 112 793 9.9E-301 T 12-10-2018 IPR010706 Fatty acid cis-trans isomerase M634_00740 33df1b110013ffe7bc7e82044398f948 467 Pfam PF01145 SPFH domain / Band 7 family 45 296 6.3E-39 T 12-10-2018 IPR001107 Band 7 domain M634_21050 88aef5ef150d15d05ef03f71568875e1 336 SUPERFAMILY SSF159245 119 287 8.5E-6 T 12-10-2018 M634_21050 88aef5ef150d15d05ef03f71568875e1 336 Pfam PF10974 Protein of unknown function (DUF2804) 28 335 3.2E-86 T 12-10-2018 IPR021243 Protein of unknown function DUF2804 M634_08305 255db108f9970148715bb6d826c751c6 331 Pfam PF11383 Protein of unknown function (DUF3187) 6 322 1.6E-133 T 12-10-2018 IPR021523 Protein of unknown function DUF3187 M634_07315 3edfc7edf3ba1b0a402dd20583ff2bdb 138 Pfam PF03994 Domain of Unknown Function (DUF350) 83 136 1.3E-13 T 12-10-2018 IPR007140 Protein of unknown function DUF350 M634_07315 3edfc7edf3ba1b0a402dd20583ff2bdb 138 Pfam PF03994 Domain of Unknown Function (DUF350) 17 70 7.5E-12 T 12-10-2018 IPR007140 Protein of unknown function DUF350 M634_07135 fb033df1d41c1538fc44caac3124021a 230 Pfam PF09335 SNARE associated Golgi protein 65 181 5.4E-23 T 12-10-2018 IPR032816 SNARE associated Golgi protein M634_01315 f9c6a561672ee2879f13e1d026d281d4 88 Pfam PF06611 Protein of unknown function (DUF1145) 4 59 6.5E-19 T 12-10-2018 IPR009525 Protein of unknown function DUF1145 M634_23755 7fdb4e0921336f443a50f90eb4700e63 409 Pfam PF02687 FtsX-like permease family 292 396 8.2E-11 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 M634_13055 45852d622290b06eed900ec43265ad7e 835 Pfam PF12571 Phage tail-collar fibre protein 7 160 6.3E-29 T 12-10-2018 IPR022225 Phage tail fibre protein M634_18640 496e74bd2f4ff95b08658e2f5069514e 450 Pfam PF02447 GntP family permease 1 448 5.1E-98 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 M634_13880 dd43f7e9c5daacddabbe240b810566b1 228 Pfam PF06930 Protein of unknown function (DUF1282) 14 223 4.6E-41 T 12-10-2018 IPR009698 Protein of unknown function DUF1282 M634_09590 487df863603d25f7619264723d3ac43e 57 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 6 45 3.3E-10 T 12-10-2018 IPR008621 Cbb3-type cytochrome oxidase component M634_22435 c7add3a55bfcdadb6c237c5dcb68663b 117 Pfam PF06950 Protein of unknown function (DUF1293) 1 115 3.8E-73 T 12-10-2018 IPR009712 Vibrio phage Vf33, Vpf117 M634_05225 ed275367c75d71fa27c754722686dd53 519 Pfam PF03806 AbgT putative transporter family 19 517 1.1E-210 T 12-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 M634_10410 08e201ec9c10f3af6921896d543a880c 494 Pfam PF03553 Na+/H+ antiporter family 226 494 2.0E-29 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 M634_14775 008064e014d7ffd25f66525b32f61cde 361 Pfam PF01594 AI-2E family transporter 14 347 2.7E-54 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like M634_06190 3ef3128db6b17e3e51d02feb5ab367d0 73 Pfam PF10981 Protein of unknown function (DUF2788) 18 67 4.4E-19 T 12-10-2018 IPR021249 Protein of unknown function DUF2788 M634_10795 d877bf74b3c35e5e49cecdaf36a9b674 420 SMART SM00901 18 118 2.6E-5 T 12-10-2018 IPR014966 FRG domain M634_10010 078ffe869097ffb743e3cdef59583858 454 Pfam PF04932 O-Antigen ligase 239 377 1.2E-19 T 12-10-2018 IPR007016 O-antigen ligase-related M634_18355 40636fd19ec4528110c55c0548118261 83 Pfam PF11280 Protein of unknown function (DUF3081) 5 81 2.1E-29 T 12-10-2018 IPR021432 Protein of unknown function DUF3081 M634_10775 8a257324030be8dd74c4fb8b60076c5c 416 Pfam PF05272 Virulence-associated protein E 106 279 5.6E-31 T 12-10-2018 IPR007936 Virulence-associated E M634_11065 83d211f344054a2461cf86da919fd7a1 90 Pfam PF14110 Domain of unknown function (DUF4282) 5 82 2.8E-15 T 12-10-2018 IPR025557 Protein of unknown function DUF4282 M634_17255 bb84067aeca4afdf24359122323cddd1 157 Pfam PF04982 HPP family 34 147 3.3E-34 T 12-10-2018 IPR007065 HPP M634_05045 1dabd8878d30f5bfd30f04c6f52fd152 506 Pfam PF03553 Na+/H+ antiporter family 161 469 3.1E-51 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 M634_20240 35496e83b03d7922d902e486651deab5 143 PIRSF PIRSF028777 1 138 3.8E-52 T 12-10-2018 IPR031308 Uncharacterised conserved protein UCP028777 M634_20240 35496e83b03d7922d902e486651deab5 143 Pfam PF03733 Inner membrane component domain 4 54 3.7E-15 T 12-10-2018 IPR005185 Inner membrane component domain M634_20240 35496e83b03d7922d902e486651deab5 143 Pfam PF03733 Inner membrane component domain 76 126 3.3E-18 T 12-10-2018 IPR005185 Inner membrane component domain M634_02175 140300a1e9b0fcb980c8f5b46803efe0 83 Pfam PF04380 Membrane fusogenic activity 1 78 2.9E-28 T 12-10-2018 IPR007475 Membrane fusogenic activity M634_14450 38bb8c3b998187bc9f4b21a84617053d 172 Pfam PF07811 TadE-like protein 10 52 9.6E-8 T 12-10-2018 IPR012495 TadE-like M634_08475 3076024723039e745f44502b81c828fb 191 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 19 82 3.7E-7 T 12-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 M634_08915 95e8db8b65b3fad6cdc42c402dcf0410 388 Pfam PF12698 ABC-2 family transporter protein 15 360 1.3E-39 T 12-10-2018 M634_07535 98cba1eb666ebb4507d557be5fec6024 279 Pfam PF07103 Protein of unknown function (DUF1365) 16 252 2.3E-69 T 12-10-2018 IPR010775 Protein of unknown function DUF1365 M634_13255 22519aafa5bea0bd81fde397c22af33a 82 Pfam PF03692 Putative zinc- or iron-chelating domain 3 59 2.5E-6 T 12-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein M634_01295 4152388650525887cd105aa00404d56f 322 PIRSF PIRSF003097 24 318 1.1E-60 T 12-10-2018 IPR004513 Cell division protein FtsX GO:0016021 M634_08170 47ea9ddc75e8f8c73cc853ee709e0576 274 Pfam PF10977 Protein of unknown function (DUF2797) 38 270 1.5E-95 T 12-10-2018 IPR021246 Protein of unknown function DUF2797 M634_05845 1a4d857fa8561ee85e407ab2711e57c7 212 PIRSF PIRSF028688 1 212 3.2E-118 T 12-10-2018 IPR014549 Flagellar protein FlgO M634_13720 b76025886f4d9bf0bd970417a802dfc9 118 Pfam PF11169 Protein of unknown function (DUF2956) 12 115 1.4E-43 T 12-10-2018 IPR021339 Protein of unknown function DUF2956 M634_07095 30f91b7f3ce44e163bcac86b002f7153 159 Pfam PF05433 Glycine zipper 2TM domain 64 101 1.5E-9 T 12-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 M634_21055 64b2990f7abfe373e0583962f8205053 290 Pfam PF04116 Fatty acid hydroxylase superfamily 97 231 2.9E-31 T 12-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 M634_03640 ccb24e4c73aaab4c16a474c7626cb583 157 Pfam PF12821 Threonine/Serine exporter, ThrE 13 147 6.6E-38 T 12-10-2018 IPR024528 Threonine/Serine exporter, ThrE M634_13400 0a19cb2c9b507d8f05a0bf9141ddb630 207 Pfam PF03458 UPF0126 domain 5 76 5.5E-19 T 12-10-2018 IPR005115 Uncharacterised domain UPF0126 M634_13400 0a19cb2c9b507d8f05a0bf9141ddb630 207 Pfam PF03458 UPF0126 domain 92 163 1.7E-19 T 12-10-2018 IPR005115 Uncharacterised domain UPF0126 M634_13130 3aa026fc6988f86510089535c142d739 139 Pfam PF05926 Phage head completion protein (GPL) 20 136 5.9E-17 T 12-10-2018 IPR009225 Bacteriophage head completion protein GpL GO:0019069 M634_09120 b95f5521142082af5b3b996298a5815c 153 Pfam PF07321 Type III secretion protein YscO 2 149 7.1E-43 T 12-10-2018 IPR009929 Type III secretion sytem,YscO M634_01615 c06d7ca3f5c7fb518e12d65913912325 252 Pfam PF09836 Putative DNA-binding domain 6 93 2.2E-22 T 12-10-2018 IPR018640 Putative DNA-binding domain, bacteria M634_00825 1d886d8bfeaab0f452750d55a3e4d41c 172 Pfam PF04186 FxsA cytoplasmic membrane protein 7 114 1.8E-34 T 12-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 M634_13805 80e51210d035aac2184398ae36a93871 403 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 21 252 1.6E-68 T 12-10-2018 IPR018642 Protein of unknown function DUF2066 M634_07745 758e594d86f852528cd004629150bf82 129 Pfam PF11042 Protein of unknown function (DUF2750) 23 122 1.0E-37 T 12-10-2018 IPR021284 Protein of unknown function DUF2750 M634_23885 913407106e455fb3d7785fa131869c99 236 Pfam PF03591 AzlC protein 25 163 2.6E-35 T 12-10-2018 IPR011606 Branched-chain amino acid transport, permease M634_23475 c942ca051fe5c2f60213e1ed12e68446 183 Pfam PF10063 Uncharacterized integral membrane protein (DUF2301) 100 181 1.1E-6 T 12-10-2018 IPR019275 Protein of unknown function DUF2301 M634_18530 b7e47e5a8a717d566aa7b3502e28e2bf 194 Pfam PF01810 LysE type translocator 17 188 1.7E-15 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 M634_08270 60d02b5d6e2984f12ae7507ec8f1b433 241 Pfam PF12119 Protein of unknown function (DUF3581) 1 217 1.4E-99 T 12-10-2018 IPR021974 Protein of unknown function DUF3581 M634_07930 013a53a7ad0dca055d5932186b5ff1f9 82 Pfam PF06945 Protein of unknown function (DUF1289) 11 56 7.6E-18 T 12-10-2018 IPR010710 Protein of unknown function DUF1289 M634_02765 584f923bb6b3a11ba299c28f5b2eb942 130 Pfam PF06476 Protein of unknown function (DUF1090) 16 117 1.6E-32 T 12-10-2018 IPR009468 Protein of unknown function DUF1090 M634_11760 4b7c11f503ce9980d03c24e4bcf7733c 179 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 30 161 3.7E-27 T 12-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ M634_16520 4c4e86460bde5b0ab933b34426196ca4 444 Pfam PF04932 O-Antigen ligase 213 370 1.2E-11 T 12-10-2018 IPR007016 O-antigen ligase-related M634_10540 617457b5baf0845725677b927ce05ab4 178 Pfam PF06042 Nucleotidyltransferase 20 176 9.5E-59 T 12-10-2018 IPR009267 Putative nucleotidyltransferase M634_16405 01eb18a6c9b3b3c3e0e8c8ea3e86f909 640 Pfam PF09614 CRISPR-associated protein (Cas_Csy2) 392 492 7.0E-13 T 12-10-2018 IPR013398 CRISPR-associated protein Csy2 M634_24385 137f3a27035512a3abfa5e512b579b96 369 SUPERFAMILY SSF69593 89 317 7.06E-9 T 12-10-2018 M634_24385 137f3a27035512a3abfa5e512b579b96 369 Pfam PF01553 Acyltransferase 92 203 1.2E-9 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 M634_18185 dea8c5c958610ab5689a9a284ce966e0 559 Pfam PF03961 Flagellar Assembly Protein A 81 545 1.9E-126 T 12-10-2018 IPR005646 Flagellar assembly protein A M634_06080 4ab690b43a97d511e5cb63f08730bd78 263 Pfam PF07556 Protein of unknown function (DUF1538) 21 246 1.6E-70 T 12-10-2018 IPR011435 Protein of unknown function DUF1538