locus-tag class description C9I78_00010 PF00589 Phage integrase family C9I78_00010 PF02899 Phage integrase, N-terminal SAM-like domain C9I78_00020 PF00009 Elongation factor Tu GTP binding domain C9I78_00020 PF03143 Elongation factor Tu C-terminal domain C9I78_00020 PF03144 Elongation factor Tu domain 2 C9I78_00030 PF00584 SecE/Sec61-gamma subunits of protein translocation complex C9I78_00035 PF00467 KOW motif C9I78_00035 PF02357 Transcription termination factor nusG C9I78_00040 PF03946 Ribosomal protein L11, N-terminal domain C9I78_00040 PF00298 Ribosomal protein L11, RNA binding domain C9I78_00045 PF00687 Ribosomal protein L1p/L10e family C9I78_00050 PF00466 Ribosomal protein L10 C9I78_00055 PF16320 Ribosomal protein L7/L12 dimerisation domain C9I78_00055 PF00542 Ribosomal protein L7/L12 C-terminal domain C9I78_00060 PF00562 RNA polymerase Rpb2, domain 6 C9I78_00060 PF04561 RNA polymerase Rpb2, domain 2 C9I78_00060 PF04560 RNA polymerase Rpb2, domain 7 C9I78_00060 PF04563 RNA polymerase beta subunit C9I78_00060 PF10385 RNA polymerase beta subunit external 1 domain C9I78_00060 PF04565 RNA polymerase Rpb2, domain 3 C9I78_00065 PF04998 RNA polymerase Rpb1, domain 5 C9I78_00065 PF04997 RNA polymerase Rpb1, domain 1 C9I78_00065 PF00623 RNA polymerase Rpb1, domain 2 C9I78_00065 PF04983 RNA polymerase Rpb1, domain 3 C9I78_00065 PF05000 RNA polymerase Rpb1, domain 4 C9I78_00070 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ C9I78_00075 PF00293 NUDIX domain C9I78_00075 PF09297 NADH pyrophosphatase zinc ribbon domain C9I78_00090 PF01208 Uroporphyrinogen decarboxylase (URO-D) C9I78_00095 PF03167 Uracil DNA glycosylase superfamily C9I78_00100 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C9I78_00105 PF04222 Protein of unknown function (DUF416) C9I78_00110 PF01595 Cyclin M transmembrane N-terminal domain C9I78_00110 PF00571 CBS domain C9I78_00115 PF00216 Bacterial DNA-binding protein C9I78_00125 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain C9I78_00125 PF02843 Phosphoribosylglycinamide synthetase, C domain C9I78_00125 PF02844 Phosphoribosylglycinamide synthetase, N domain C9I78_00135 PF01808 AICARFT/IMPCHase bienzyme C9I78_00135 PF02142 MGS-like domain C9I78_00145 PF13411 MerR HTH family regulatory protein C9I78_00150 PF18500 CadC C-terminal domain 1 C9I78_00150 PF00486 Transcriptional regulatory protein, C terminal C9I78_00160 PF13520 Amino acid permease C9I78_00165 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain C9I78_00165 PF01276 Orn/Lys/Arg decarboxylase, major domain C9I78_00165 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain C9I78_00230 PF00990 Diguanylate cyclase, GGDEF domain C9I78_00230 PF05230 MASE2 domain C9I78_00235 PF01610 Transposase C9I78_00235 PF13542 Helix-turn-helix domain of transposase family ISL3 C9I78_00235 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C9I78_00245 PF12848 ABC transporter C9I78_00245 PF00005 ABC transporter C9I78_00250 PF07690 Major Facilitator Superfamily C9I78_00260 PF06480 FtsH Extracellular C9I78_00260 PF00004 ATPase family associated with various cellular activities (AAA) C9I78_00260 PF17862 AAA+ lid domain C9I78_00260 PF01434 Peptidase family M41 C9I78_00315 PF02954 Bacterial regulatory protein, Fis family C9I78_00320 PF01207 Dihydrouridine synthase (Dus) C9I78_00335 PF00289 Biotin carboxylase, N-terminal domain C9I78_00335 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C9I78_00335 PF02785 Biotin carboxylase C-terminal domain C9I78_00340 PF00364 Biotin-requiring enzyme C9I78_00345 PF01220 Dehydroquinase class II C9I78_00350 PF00501 AMP-binding enzyme C9I78_00350 PF16177 Acetyl-coenzyme A synthetase N-terminus C9I78_00350 PF13193 AMP-binding enzyme C-terminal domain C9I78_00365 PF12832 MFS_1 like family C9I78_00370 PF00072 Response regulator receiver domain C9I78_00370 PF09308 LuxQ, periplasmic C9I78_00370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_00370 PF00512 His Kinase A (phospho-acceptor) domain C9I78_00375 PF00206 Lyase C9I78_00375 PF10415 Fumarase C C-terminus C9I78_00395 PF00474 Sodium:solute symporter family C9I78_00405 PF00999 Sodium/hydrogen exchanger family C9I78_00405 PF03471 Transporter associated domain C9I78_00405 PF02080 TrkA-C domain C9I78_00410 PF00072 Response regulator receiver domain C9I78_00410 PF00196 Bacterial regulatory proteins, luxR family C9I78_00415 PF02683 Cytochrome C biogenesis protein transmembrane region C9I78_00415 PF11412 Disulphide bond corrector protein DsbC C9I78_00420 PF03605 Anaerobic c4-dicarboxylate membrane transporter C9I78_00425 PF00206 Lyase C9I78_00425 PF10415 Fumarase C C-terminus C9I78_00430 PF04186 FxsA cytoplasmic membrane protein C9I78_00435 PF00588 SpoU rRNA Methylase family C9I78_00440 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C9I78_00440 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C9I78_00445 PF16527 Two-component sensor protein CpxA, periplasmic domain C9I78_00445 PF00672 HAMP domain C9I78_00445 PF00512 His Kinase A (phospho-acceptor) domain C9I78_00445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_00450 PF00072 Response regulator receiver domain C9I78_00450 PF00486 Transcriptional regulatory protein, C terminal C9I78_00460 PF07813 LTXXQ motif family protein C9I78_00465 PF16916 Dimerisation domain of Zinc Transporter C9I78_00465 PF01545 Cation efflux family C9I78_00470 PF00365 Phosphofructokinase C9I78_00475 PF01554 MatE C9I78_00480 PF00166 Chaperonin 10 Kd subunit C9I78_00485 PF00118 TCP-1/cpn60 chaperonin family C9I78_00495 PF02308 MgtC family C9I78_00505 PF01168 Alanine racemase, N-terminal domain C9I78_00505 PF00842 Alanine racemase, C-terminal domain C9I78_00515 PF04055 Radical SAM superfamily C9I78_00520 PF09285 Elongation factor P, C-terminal C9I78_00520 PF08207 Elongation factor P (EF-P) KOW-like domain C9I78_00520 PF01132 Elongation factor P (EF-P) OB domain C9I78_00530 PF02313 Fumarate reductase subunit D C9I78_00535 PF02300 Fumarate reductase subunit C C9I78_00540 PF13183 4Fe-4S dicluster domain C9I78_00540 PF13085 2Fe-2S iron-sulfur cluster binding domain C9I78_00545 PF00890 FAD binding domain C9I78_00545 PF02910 Fumarate reductase flavoprotein C-term C9I78_00555 PF00152 tRNA synthetases class II (D, K and N) C9I78_00565 PF08360 QacR-like protein, C-terminal region C9I78_00565 PF00440 Bacterial regulatory proteins, tetR family C9I78_00575 PF01551 Peptidase family M23 C9I78_00580 PF06426 Serine acetyltransferase, N-terminal C9I78_00580 PF00132 Bacterial transferase hexapeptide (six repeats) C9I78_00585 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C9I78_00585 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C9I78_00590 PF02556 Preprotein translocase subunit SecB C9I78_00595 PF00581 Rhodanese-like domain C9I78_00600 PF01676 Metalloenzyme superfamily C9I78_00600 PF06415 BPG-independent PGAM N-terminus (iPGM_N) C9I78_00610 PF02743 Cache domain C9I78_00610 PF00672 HAMP domain C9I78_00610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C9I78_00615 PF00939 Sodium:sulfate symporter transmembrane region C9I78_00620 PF02666 Phosphatidylserine decarboxylase C9I78_00625 PF03193 RsgA GTPase C9I78_00630 PF00929 Exonuclease C9I78_00700 PF08331 Domain of unknown function (DUF1730) C9I78_00705 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE C9I78_00710 PF01520 N-acetylmuramoyl-L-alanine amidase C9I78_00715 PF01119 DNA mismatch repair protein, C-terminal domain C9I78_00715 PF08676 MutL C terminal dimerisation domain C9I78_00725 PF17209 Hfq protein C9I78_00730 PF16360 GTP-binding GTPase Middle Region C9I78_00730 PF13167 GTP-binding GTPase N-terminal C9I78_00730 PF01926 50S ribosome-binding GTPase C9I78_00735 PF01145 SPFH domain / Band 7 family C9I78_00735 PF12221 Bacterial membrane protein N terminal C9I78_00740 PF01145 SPFH domain / Band 7 family C9I78_00745 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) C9I78_00750 PF00709 Adenylosuccinate synthetase C9I78_00760 PF08238 Sel1 repeat C9I78_00765 PF00042 Globin C9I78_00765 PF00175 Oxidoreductase NAD-binding domain C9I78_00765 PF00970 Oxidoreductase FAD-binding domain C9I78_00770 PF02082 Transcriptional regulator C9I78_00775 PF08206 Ribonuclease B OB domain C9I78_00775 PF17876 Cold shock domain C9I78_00775 PF08461 Ribonuclease R winged-helix domain C9I78_00775 PF00575 S1 RNA binding domain C9I78_00775 PF00773 RNB domain C9I78_00780 PF00588 SpoU rRNA Methylase family C9I78_00780 PF08032 RNA 2'-O ribose methyltransferase substrate binding C9I78_00785 PF13419 Haloacid dehalogenase-like hydrolase C9I78_00790 PF00579 tRNA synthetases class I (W and Y) C9I78_00820 PF00117 Glutamine amidotransferase class-I C9I78_00825 PF00202 Aminotransferase class-III C9I78_00830 PF04958 Arginine N-succinyltransferase beta subunit C9I78_00835 PF00171 Aldehyde dehydrogenase family C9I78_00845 PF13545 Crp-like helix-turn-helix domain C9I78_00845 PF00027 Cyclic nucleotide-binding domain C9I78_00850 PF00485 Phosphoribulokinase / Uridine kinase family C9I78_00855 PF06794 Uncharacterised protein family (UPF0270) C9I78_00860 PF00561 alpha/beta hydrolase fold C9I78_00870 PF12848 ABC transporter C9I78_00870 PF00005 ABC transporter C9I78_00880 PF02525 Flavodoxin-like fold C9I78_00885 PF02254 TrkA-N domain C9I78_00885 PF00999 Sodium/hydrogen exchanger family C9I78_00895 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C9I78_00905 PF01112 Asparaginase C9I78_00910 PF04102 SlyX C9I78_00920 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C9I78_00920 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C9I78_00925 PF13309 HTH domain C9I78_00925 PF08348 YheO-like PAS domain C9I78_00930 PF02635 DsrE/DsrF-like family C9I78_00935 PF02635 DsrE/DsrF-like family C9I78_00940 PF04077 DsrH like protein C9I78_00945 PF00164 Ribosomal protein S12/S23 C9I78_00950 PF00177 Ribosomal protein S7p/S5e C9I78_00955 PF03764 Elongation factor G, domain IV C9I78_00955 PF00679 Elongation factor G C-terminus C9I78_00955 PF14492 Elongation Factor G, domain II C9I78_00955 PF00009 Elongation factor Tu GTP binding domain C9I78_00955 PF03144 Elongation factor Tu domain 2 C9I78_00960 PF03144 Elongation factor Tu domain 2 C9I78_00960 PF00009 Elongation factor Tu GTP binding domain C9I78_00960 PF03143 Elongation factor Tu C-terminal domain C9I78_00965 PF04324 BFD-like [2Fe-2S] binding domain C9I78_00970 PF00210 Ferritin-like domain C9I78_00975 PF00390 Malic enzyme, N-terminal domain C9I78_00975 PF03949 Malic enzyme, NAD binding domain C9I78_00980 PF01340 Met Apo-repressor, MetJ C9I78_00985 PF01053 Cys/Met metabolism PLP-dependent enzyme C9I78_00990 PF03447 Homoserine dehydrogenase, NAD binding domain C9I78_00990 PF00696 Amino acid kinase family C9I78_00990 PF00742 Homoserine dehydrogenase C9I78_00995 PF02219 Methylenetetrahydrofolate reductase C9I78_01005 PF00311 Phosphoenolpyruvate carboxylase C9I78_01010 PF07687 Peptidase dimerisation domain C9I78_01010 PF01546 Peptidase family M20/M25/M40 C9I78_01015 PF01118 Semialdehyde dehydrogenase, NAD binding domain C9I78_01015 PF02774 Semialdehyde dehydrogenase, dimerisation domain C9I78_01020 PF00696 Amino acid kinase family C9I78_01025 PF00764 Arginosuccinate synthase C9I78_01030 PF14698 Argininosuccinate lyase C-terminal C9I78_01030 PF00206 Lyase C9I78_01030 PF00583 Acetyltransferase (GNAT) family C9I78_01045 PF08534 Redoxin C9I78_01045 PF00462 Glutaredoxin C9I78_01050 PF03466 LysR substrate binding domain C9I78_01050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_01055 PF00912 Transglycosylase C9I78_01055 PF00905 Penicillin binding protein transpeptidase domain C9I78_01055 PF17092 Penicillin-binding protein OB-like domain C9I78_01080 PF07660 Secretin and TonB N terminus short domain C9I78_01080 PF03958 Bacterial type II/III secretion system short domain C9I78_01080 PF00263 Bacterial type II and III secretion system protein C9I78_01080 PF11741 AMIN domain C9I78_01085 PF01202 Shikimate kinase C9I78_01090 PF01761 3-dehydroquinate synthase C9I78_01100 PF02086 D12 class N6 adenine-specific DNA methyltransferase C9I78_01105 PF00834 Ribulose-phosphate 3 epimerase family C9I78_01110 PF13542 Helix-turn-helix domain of transposase family ISL3 C9I78_01110 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C9I78_01110 PF01610 Transposase C9I78_01115 PF01250 Ribosomal protein S6 C9I78_01120 PF00436 Single-strand binding protein family C9I78_01125 PF01084 Ribosomal protein S18 C9I78_01130 PF01281 Ribosomal protein L9, N-terminal domain C9I78_01130 PF03948 Ribosomal protein L9, C-terminal domain C9I78_01140 PF00772 DnaB-like helicase N terminal domain C9I78_01140 PF03796 DnaB-like helicase C terminal domain C9I78_01145 PF00842 Alanine racemase, C-terminal domain C9I78_01145 PF01168 Alanine racemase, N-terminal domain C9I78_01155 PF01894 Uncharacterised protein family UPF0047 C9I78_01160 PF00342 Phosphoglucose isomerase C9I78_01170 PF01475 Ferric uptake regulator family C9I78_01180 PF01207 Dihydrouridine synthase (Dus) C9I78_01205 PF00175 Oxidoreductase NAD-binding domain C9I78_01205 PF00258 Flavodoxin C9I78_01205 PF00667 FAD binding domain C9I78_01210 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C9I78_01210 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C9I78_01215 PF01507 Phosphoadenosine phosphosulfate reductase family C9I78_01285 PF13358 DDE superfamily endonuclease C9I78_01295 PF00999 Sodium/hydrogen exchanger family C9I78_01300 PF02965 Vitamin B12 dependent methionine synthase, activation domain C9I78_01300 PF02607 B12 binding domain C9I78_01300 PF02310 B12 binding domain C9I78_01300 PF02574 Homocysteine S-methyltransferase C9I78_01300 PF00809 Pterin binding enzyme C9I78_01305 PF01842 ACT domain C9I78_01305 PF00696 Amino acid kinase family C9I78_01315 PF00266 Aminotransferase class-V C9I78_01325 PF17760 UvrA interaction domain C9I78_01325 PF00005 ABC transporter C9I78_01325 PF17755 UvrA DNA-binding domain C9I78_01330 PF00483 Nucleotidyl transferase C9I78_01335 PF00196 Bacterial regulatory proteins, luxR family C9I78_01340 PF00436 Single-strand binding protein family C9I78_01370 PF13538 UvrD-like helicase C-terminal domain C9I78_01370 PF14490 Helix-hairpin-helix containing domain C9I78_01370 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain C9I78_01390 PF00990 Diguanylate cyclase, GGDEF domain C9I78_01390 PF00563 EAL domain C9I78_01390 PF17157 Gammaproteobacterial periplasmic sensor domain C9I78_01410 PF00263 Bacterial type II and III secretion system protein C9I78_01410 PF11741 AMIN domain C9I78_01410 PF03958 Bacterial type II/III secretion system short domain C9I78_01410 PF07660 Secretin and TonB N terminus short domain C9I78_01415 PF13401 AAA domain C9I78_01415 PF01471 Putative peptidoglycan binding domain C9I78_01425 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C9I78_01425 PF00437 Type II/IV secretion system protein C9I78_01430 PF00482 Type II secretion system (T2SS), protein F C9I78_01440 PF07963 Prokaryotic N-terminal methylation motif C9I78_01440 PF00114 Pilin (bacterial filament) C9I78_01480 PF04085 rod shape-determining protein MreC C9I78_01485 PF04093 rod shape-determining protein MreD C9I78_01490 PF02545 Maf-like protein C9I78_01495 PF00575 S1 RNA binding domain C9I78_01495 PF10150 Ribonuclease E/G family C9I78_01500 PF13502 AsmA-like C-terminal region C9I78_01500 PF13116 Protein of unknown function C9I78_01505 PF00795 Carbon-nitrogen hydrolase C9I78_01510 PF01523 Putative modulator of DNA gyrase C9I78_01515 PF13638 PIN domain C9I78_01515 PF02562 PhoH-like protein C9I78_01520 PF18339 RapA N-terminal Tudor like domain 1 C9I78_01520 PF00176 SNF2 family N-terminal domain C9I78_01520 PF12137 RNA polymerase recycling family C-terminal C9I78_01520 PF00271 Helicase conserved C-terminal domain C9I78_01520 PF18337 RapA N-terminal Tudor like domain C9I78_01535 PF00849 RNA pseudouridylate synthase C9I78_01540 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C9I78_01540 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C9I78_01545 PF04751 Protein of unknown function (DUF615) C9I78_01550 PF01523 Putative modulator of DNA gyrase C9I78_01555 PF00571 CBS domain C9I78_01555 PF01769 Divalent cation transporter C9I78_01555 PF03448 MgtE intracellular N domain C9I78_01560 PF00381 PTS HPr component phosphorylation site C9I78_01565 PF03668 P-loop ATPase protein family C9I78_01570 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C9I78_01575 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C9I78_01580 PF04552 Sigma-54, DNA binding domain C9I78_01580 PF04963 Sigma-54 factor, core binding domain C9I78_01580 PF00309 Sigma-54 factor, Activator interacting domain (AID) C9I78_01585 PF00005 ABC transporter C9I78_01585 PF12399 Branched-chain amino acid ATP-binding cassette transporter C9I78_01590 PF03968 OstA-like protein C9I78_01600 PF01380 SIS domain C9I78_01600 PF00571 CBS domain C9I78_01605 PF01699 Sodium/calcium exchanger protein C9I78_01610 PF00005 ABC transporter C9I78_01615 PF02405 Permease MlaE C9I78_01620 PF02470 MlaD protein C9I78_01625 PF05494 MlaC protein C9I78_01635 PF01722 BolA-like protein C9I78_01640 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C9I78_01645 PF01553 Acyltransferase C9I78_01650 PF01042 Endoribonuclease L-PSP C9I78_01655 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain C9I78_01655 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain C9I78_01660 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C9I78_01660 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C9I78_01670 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C9I78_01670 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C9I78_01685 PF06877 Regulator of ribonuclease activity B C9I78_01745 PF00583 Acetyltransferase (GNAT) family C9I78_01755 PF00133 tRNA synthetases class I (I, L, M and V) C9I78_01755 PF08264 Anticodon-binding domain of tRNA C9I78_01755 PF10458 Valyl tRNA synthetase tRNA binding arm C9I78_01760 PF04364 DNA polymerase III chi subunit, HolC C9I78_01765 PF00883 Cytosol aminopeptidase family, catalytic domain C9I78_01765 PF02789 Cytosol aminopeptidase family, N-terminal domain C9I78_01770 PF03739 Lipopolysaccharide export system permease LptF/LptG C9I78_01775 PF03739 Lipopolysaccharide export system permease LptF/LptG C9I78_01785 PF10011 Predicted membrane protein (DUF2254) C9I78_01790 PF00106 short chain dehydrogenase C9I78_01805 PF01522 Polysaccharide deacetylase C9I78_01810 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C9I78_01815 PF02378 Phosphotransferase system, EIIC C9I78_01820 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit C9I78_01825 PF02056 Family 4 glycosyl hydrolase C9I78_01825 PF11975 Family 4 glycosyl hydrolase C-terminal domain C9I78_01830 PF04794 YdjC-like protein C9I78_01835 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C9I78_01835 PF00356 Bacterial regulatory proteins, lacI family C9I78_01840 PF00072 Response regulator receiver domain C9I78_01890 PF00171 Aldehyde dehydrogenase family C9I78_01920 PF17200 Single Cache domain 2 C9I78_01920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C9I78_01920 PF00672 HAMP domain C9I78_01960 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain C9I78_01960 PF01464 Transglycosylase SLT domain C9I78_01965 PF04362 Bacterial Fe(2+) trafficking C9I78_01970 PF14815 NUDIX domain C9I78_01970 PF00730 HhH-GPD superfamily base excision DNA repair protein C9I78_01970 PF00633 Helix-hairpin-helix motif C9I78_01975 PF02390 Putative methyltransferase C9I78_01980 PF02086 D12 class N6 adenine-specific DNA methyltransferase C9I78_01985 PF04960 Glutaminase C9I78_01990 PF04055 Radical SAM superfamily C9I78_01990 PF06969 HemN C-terminal domain C9I78_01995 PF01725 Ham1 family C9I78_02005 PF02594 Uncharacterised ACR, YggU family COG1872 C9I78_02010 PF02325 YGGT family C9I78_02015 PF14748 Pyrroline-5-carboxylate reductase dimerisation C9I78_02015 PF03807 NADP oxidoreductase coenzyme F420-dependent C9I78_02020 PF01168 Alanine racemase, N-terminal domain C9I78_02025 PF00437 Type II/IV secretion system protein C9I78_02030 PF00437 Type II/IV secretion system protein C9I78_02035 PF03652 Holliday junction resolvase C9I78_02040 PF02622 Uncharacterized ACR, COG1678 C9I78_02045 PF02951 Prokaryotic glutathione synthetase, N-terminal domain C9I78_02045 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain C9I78_02050 PF04452 RNA methyltransferase C9I78_02055 PF04231 Endonuclease I C9I78_02060 PF17283 SprT-like zinc ribbon domain C9I78_02060 PF10263 SprT-like family C9I78_02070 PF02773 S-adenosylmethionine synthetase, C-terminal domain C9I78_02070 PF00438 S-adenosylmethionine synthetase, N-terminal domain C9I78_02070 PF02772 S-adenosylmethionine synthetase, central domain C9I78_02080 PF02779 Transketolase, pyrimidine binding domain C9I78_02080 PF00456 Transketolase, thiamine diphosphate binding domain C9I78_02080 PF02780 Transketolase, C-terminal domain C9I78_02085 PF03466 LysR substrate binding domain C9I78_02085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_02090 PF00593 TonB dependent receptor C9I78_02090 PF07715 TonB-dependent Receptor Plug Domain C9I78_02095 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C9I78_02095 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C9I78_02100 PF00162 Phosphoglycerate kinase C9I78_02105 PF01116 Fructose-bisphosphate aldolase class-II C9I78_02110 PF00924 Mechanosensitive ion channel C9I78_02110 PF05552 Conserved TM helix C9I78_02115 PF04073 Aminoacyl-tRNA editing domain C9I78_02120 PF01810 LysE type translocator C9I78_02125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_02125 PF03466 LysR substrate binding domain C9I78_02130 PF04402 Protein of unknown function (DUF541) C9I78_02135 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C9I78_02135 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C9I78_02135 PF01842 ACT domain C9I78_02140 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) C9I78_02145 PF01812 5-formyltetrahydrofolate cyclo-ligase family C9I78_02155 PF05164 Cell division protein ZapA C9I78_02165 PF03695 Uncharacterised protein family (UPF0149) C9I78_02170 PF01494 FAD binding domain C9I78_02175 PF01494 FAD binding domain C9I78_02190 PF01571 Aminomethyltransferase folate-binding domain C9I78_02195 PF03937 Flavinator of succinate dehydrogenase C9I78_02205 PF00890 FAD binding domain C9I78_02205 PF02910 Fumarate reductase flavoprotein C-term C9I78_02215 PF04542 Sigma-70 region 2 C9I78_02215 PF08281 Sigma-70, region 4 C9I78_02220 PF03872 Anti sigma-E protein RseA, N-terminal domain C9I78_02220 PF03873 Anti sigma-E protein RseA, C-terminal domain C9I78_02225 PF03888 MucB/RseB N-terminal domain C9I78_02225 PF17188 MucB/RseB C-terminal domain C9I78_02235 PF06421 GTP-binding protein LepA C-terminus C9I78_02235 PF00679 Elongation factor G C-terminus C9I78_02235 PF00009 Elongation factor Tu GTP binding domain C9I78_02235 PF03144 Elongation factor Tu domain 2 C9I78_02240 PF10502 Signal peptidase, peptidase S26 C9I78_02245 PF14622 Ribonuclease-III-like C9I78_02245 PF00035 Double-stranded RNA binding motif C9I78_02250 PF07650 KH domain C9I78_02250 PF01926 50S ribosome-binding GTPase C9I78_02255 PF02565 Recombination protein O C terminal C9I78_02255 PF11967 Recombination protein O N terminal C9I78_02260 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ C9I78_02265 PF01648 4'-phosphopantetheinyl transferase superfamily C9I78_02270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_02270 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C9I78_02270 PF00512 His Kinase A (phospho-acceptor) domain C9I78_02270 PF00072 Response regulator receiver domain C9I78_02270 PF00672 HAMP domain C9I78_02270 PF01627 Hpt domain C9I78_02280 PF05958 tRNA (Uracil-5-)-methyltransferase C9I78_02280 PF01938 TRAM domain C9I78_02290 PF02824 TGS domain C9I78_02290 PF13291 ACT domain C9I78_02290 PF04607 Region found in RelA / SpoT proteins C9I78_02295 PF03819 MazG nucleotide pyrophosphohydrolase domain C9I78_02300 PF00117 Glutamine amidotransferase class-I C9I78_02300 PF06418 CTP synthase N-terminus C9I78_02305 PF00113 Enolase, C-terminal TIM barrel domain C9I78_02305 PF03952 Enolase, N-terminal domain C9I78_02310 PF04977 Septum formation initiator C9I78_02315 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase C9I78_02320 PF02542 YgbB family C9I78_02325 PF01142 tRNA pseudouridine synthase D (TruD) C9I78_02330 PF01975 Survival protein SurE C9I78_02340 PF01551 Peptidase family M23 C9I78_02340 PF01476 LysM domain C9I78_02350 PF05190 MutS family domain IV C9I78_02350 PF01624 MutS domain I C9I78_02350 PF05188 MutS domain II C9I78_02350 PF05192 MutS domain III C9I78_02350 PF00488 MutS domain V C9I78_02355 PF02464 Competence-damaged protein C9I78_02365 PF00154 recA bacterial DNA recombination protein C9I78_02430 PF02631 RecX family C9I78_02435 PF01411 tRNA synthetases class II (A) C9I78_02435 PF02272 DHHA1 domain C9I78_02435 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C9I78_02440 PF00696 Amino acid kinase family C9I78_02440 PF01842 ACT domain C9I78_02440 PF13840 ACT domain C9I78_02445 PF02599 Global regulator protein family C9I78_02500 PF04277 Oxaloacetate decarboxylase, gamma chain C9I78_02505 PF02436 Conserved carboxylase domain C9I78_02505 PF00682 HMGL-like C9I78_02505 PF00364 Biotin-requiring enzyme C9I78_02510 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit C9I78_02515 PF08240 Alcohol dehydrogenase GroES-like domain C9I78_02515 PF00107 Zinc-binding dehydrogenase C9I78_02520 PF09335 SNARE associated Golgi protein C9I78_02525 PF05193 Peptidase M16 inactive domain C9I78_02525 PF00675 Insulinase (Peptidase family M16) C9I78_02530 PF04262 Glutamate-cysteine ligase C9I78_02540 PF02664 S-Ribosylhomocysteinase (LuxS) C9I78_02545 PF00571 CBS domain C9I78_02545 PF03471 Transporter associated domain C9I78_02545 PF01595 Cyclin M transmembrane N-terminal domain C9I78_02550 PF01578 Cytochrome C assembly protein C9I78_02555 PF02978 Signal peptide binding domain C9I78_02555 PF02881 SRP54-type protein, helical bundle domain C9I78_02555 PF00448 SRP54-type protein, GTPase domain C9I78_02560 PF00886 Ribosomal protein S16 C9I78_02565 PF01782 RimM N-terminal domain C9I78_02565 PF05239 PRC-barrel domain C9I78_02570 PF01746 tRNA (Guanine-1)-methyltransferase C9I78_02575 PF01245 Ribosomal protein L19 C9I78_02580 PF03884 DNA gyrase inhibitor YacG C9I78_02585 PF07072 Cell division protein C9I78_02590 PF01121 Dephospho-CoA kinase C9I78_02595 PF01478 Type IV leader peptidase family C9I78_02595 PF06750 Bacterial Peptidase A24 N-terminal domain C9I78_02600 PF00482 Type II secretion system (T2SS), protein F C9I78_02605 PF00437 Type II/IV secretion system protein C9I78_02605 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C9I78_02615 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain C9I78_02615 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain C9I78_02620 PF01510 N-acetylmuramoyl-L-alanine amidase C9I78_02625 PF00392 Bacterial regulatory proteins, gntR family C9I78_02625 PF07729 FCD domain C9I78_02630 PF17831 Pyruvate dehydrogenase E1 component middle domain C9I78_02630 PF00456 Transketolase, thiamine diphosphate binding domain C9I78_02635 PF02817 e3 binding domain C9I78_02635 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C9I78_02635 PF00364 Biotin-requiring enzyme C9I78_02640 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C9I78_02640 PF07992 Pyridine nucleotide-disulphide oxidoreductase C9I78_02645 PF00440 Bacterial regulatory proteins, tetR family C9I78_02650 PF00156 Phosphoribosyl transferase domain C9I78_02655 PF00484 Carbonic anhydrase C9I78_02660 PF01740 STAS domain C9I78_02660 PF00916 Sulfate permease family C9I78_02670 PF00005 ABC transporter C9I78_02675 PF01061 ABC-2 type transporter C9I78_02685 PF03279 Bacterial lipid A biosynthesis acyltransferase C9I78_02695 PF02569 Pantoate-beta-alanine ligase C9I78_02700 PF02548 Ketopantoate hydroxymethyltransferase C9I78_02705 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C9I78_02710 PF12627 Probable RNA and SrmB- binding site of polymerase A C9I78_02710 PF12626 Polymerase A arginine-rich C-terminus C9I78_02710 PF01743 Poly A polymerase head domain C9I78_02720 PF00749 tRNA synthetases class I (E and Q), catalytic domain C9I78_02730 PF01258 Prokaryotic dksA/traR C4-type zinc finger C9I78_02735 PF03749 Sugar fermentation stimulation protein RE domain C9I78_02735 PF17746 SfsA N-terminal OB domain C9I78_02775 PF07804 HipA-like C-terminal domain C9I78_02775 PF13657 HipA N-terminal domain C9I78_02785 PF01381 Helix-turn-helix C9I78_02845 PF14814 Bifunctional transglycosylase second domain C9I78_02845 PF00905 Penicillin binding protein transpeptidase domain C9I78_02845 PF00912 Transglycosylase C9I78_02850 PF01734 Patatin-like phospholipase C9I78_02855 PF06434 Aconitate hydratase 2 N-terminus C9I78_02855 PF11791 Aconitate B N-terminal domain C9I78_02855 PF00330 Aconitase family (aconitate hydratase) C9I78_02860 PF06062 Uncharacterised protein family (UPF0231) C9I78_02865 PF00543 Nitrogen regulatory protein P-II C9I78_02870 PF00909 Ammonium Transporter Family C9I78_02875 PF13416 Bacterial extracellular solute-binding protein C9I78_02885 PF00005 ABC transporter C9I78_02885 PF08402 TOBE domain C9I78_02890 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C9I78_02890 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C9I78_02890 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C9I78_02895 PF06165 Glycosyltransferase family 36 C9I78_02895 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain C9I78_02900 PF00728 Glycosyl hydrolase family 20, catalytic domain C9I78_02900 PF02838 Glycosyl hydrolase family 20, domain 2 C9I78_02905 PF01869 BadF/BadG/BcrA/BcrD ATPase family C9I78_02915 PF00005 ABC transporter C9I78_02915 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C9I78_02920 PF00005 ABC transporter C9I78_02920 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C9I78_02925 PF00528 Binding-protein-dependent transport system inner membrane component C9I78_02925 PF12911 N-terminal TM domain of oligopeptide transport permease C C9I78_02930 PF00528 Binding-protein-dependent transport system inner membrane component C9I78_02935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C9I78_02940 PF00512 His Kinase A (phospho-acceptor) domain C9I78_02940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_02940 PF00497 Bacterial extracellular solute-binding proteins, family 3 C9I78_02940 PF00072 Response regulator receiver domain C9I78_02950 PF08468 Methyltransferase small domain N-terminal C9I78_02950 PF05175 Methyltransferase small domain C9I78_02955 PF01594 AI-2E family transporter C9I78_02960 PF00202 Aminotransferase class-III C9I78_02965 PF01521 Iron-sulphur cluster biosynthesis C9I78_02975 PF00873 AcrB/AcrD/AcrF family C9I78_02980 PF01476 LysM domain C9I78_02980 PF01551 Peptidase family M23 C9I78_02980 PF08525 Opacity-associated protein A N-terminal motif C9I78_02985 PF00579 tRNA synthetases class I (W and Y) C9I78_02995 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family C9I78_03000 PF13609 Gram-negative porin C9I78_03005 PF01272 Transcription elongation factor, GreA/GreB, C-term C9I78_03005 PF03449 Transcription elongation factor, N-terminal C9I78_03010 PF01985 CRS1 / YhbY (CRM) domain C9I78_03015 PF01728 FtsJ-like methyltransferase C9I78_03020 PF06480 FtsH Extracellular C9I78_03020 PF17862 AAA+ lid domain C9I78_03020 PF00004 ATPase family associated with various cellular activities (AAA) C9I78_03020 PF01434 Peptidase family M41 C9I78_03025 PF00809 Pterin binding enzyme C9I78_03030 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C9I78_03030 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C9I78_03030 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C9I78_03030 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C9I78_03040 PF03840 Preprotein translocase SecG subunit C9I78_03055 PF02576 RimP N-terminal domain C9I78_03055 PF17384 RimP C-terminal SH3 domain C9I78_03060 PF13184 NusA-like KH domain C9I78_03060 PF08529 NusA N-terminal domain C9I78_03060 PF00575 S1 RNA binding domain C9I78_03065 PF00009 Elongation factor Tu GTP binding domain C9I78_03065 PF11987 Translation-initiation factor 2 C9I78_03065 PF08364 Bacterial translation initiation factor IF-2 associated region C9I78_03065 PF04760 Translation initiation factor IF-2, N-terminal region C9I78_03070 PF02033 Ribosome-binding factor A C9I78_03075 PF01509 TruB family pseudouridylate synthase (N terminal domain) C9I78_03075 PF09157 Pseudouridine synthase II TruB, C-terminal C9I78_03075 PF16198 tRNA pseudouridylate synthase B C-terminal domain C9I78_03080 PF00312 Ribosomal protein S15 C9I78_03085 PF00013 KH domain C9I78_03085 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain C9I78_03085 PF01138 3' exoribonuclease family, domain 1 C9I78_03085 PF03725 3' exoribonuclease family, domain 2 C9I78_03085 PF00575 S1 RNA binding domain C9I78_03090 PF07719 Tetratricopeptide repeat C9I78_03090 PF13181 Tetratricopeptide repeat C9I78_03100 PF01554 MatE C9I78_03115 PF00990 Diguanylate cyclase, GGDEF domain C9I78_03115 PF03707 Bacterial signalling protein N terminal repeat C9I78_03115 PF00563 EAL domain C9I78_03125 PF13508 Acetyltransferase (GNAT) domain C9I78_03145 PF16658 Class II release factor RF3, C-terminal domain C9I78_03145 PF00009 Elongation factor Tu GTP binding domain C9I78_03145 PF03144 Elongation factor Tu domain 2 C9I78_03155 PF01026 TatD related DNase C9I78_03160 PF07670 Nucleoside recognition C9I78_03160 PF01773 Na+ dependent nucleoside transporter N-terminus C9I78_03160 PF07662 Na+ dependent nucleoside transporter C-terminus C9I78_03165 PF01791 DeoC/LacD family aldolase C9I78_03170 PF00591 Glycosyl transferase family, a/b domain C9I78_03170 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain C9I78_03170 PF02885 Glycosyl transferase family, helical bundle domain C9I78_03175 PF01676 Metalloenzyme superfamily C9I78_03180 PF01048 Phosphorylase superfamily C9I78_03190 PF18429 Domain of unknown function (DUF5609) C9I78_03200 PF18073 Rubredoxin metal binding domain C9I78_03205 PF00679 Elongation factor G C-terminus C9I78_03205 PF00009 Elongation factor Tu GTP binding domain C9I78_03205 PF14492 Elongation Factor G, domain II C9I78_03205 PF03764 Elongation factor G, domain IV C9I78_03205 PF03144 Elongation factor Tu domain 2 C9I78_03210 PF03466 LysR substrate binding domain C9I78_03210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_03225 PF12833 Helix-turn-helix domain C9I78_03225 PF02805 Metal binding domain of Ada C9I78_03250 PF00263 Bacterial type II and III secretion system protein C9I78_03250 PF04972 BON domain C9I78_03250 PF13629 Pilus formation protein N terminal region C9I78_03280 PF00437 Type II/IV secretion system protein C9I78_03310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_03310 PF03466 LysR substrate binding domain C9I78_03315 PF13520 Amino acid permease C9I78_03320 PF04074 YhcH/YjgK/YiaL C9I78_03325 PF16353 Domain of unknown function(DUF4981) C9I78_03325 PF00703 Glycosyl hydrolases family 2 C9I78_03325 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C9I78_03325 PF02929 Beta galactosidase small chain C9I78_03325 PF02837 Glycosyl hydrolases family 2, sugar binding domain C9I78_03330 PF00356 Bacterial regulatory proteins, lacI family C9I78_03340 PF16363 GDP-mannose 4,6 dehydratase C9I78_03345 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain C9I78_03345 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain C9I78_03350 PF08544 GHMP kinases C terminal C9I78_03350 PF00288 GHMP kinases N terminal domain C9I78_03350 PF10509 Galactokinase galactose-binding signature C9I78_03355 PF01263 Aldose 1-epimerase C9I78_03360 PF00356 Bacterial regulatory proteins, lacI family C9I78_03375 PF00356 Bacterial regulatory proteins, lacI family C9I78_03380 PF01588 Putative tRNA binding domain C9I78_03395 PF01544 CorA-like Mg2+ transporter protein C9I78_03400 PF16901 C-terminal domain of alpha-glycerophosphate oxidase C9I78_03400 PF01266 FAD dependent oxidoreductase C9I78_03405 PF00455 DeoR C terminal sensor domain C9I78_03405 PF08220 DeoR-like helix-turn-helix domain C9I78_03410 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C9I78_03410 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C9I78_03415 PF00230 Major intrinsic protein C9I78_03430 PF07690 Major Facilitator Superfamily C9I78_03435 PF03009 Glycerophosphoryl diester phosphodiesterase family C9I78_03440 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle C9I78_03440 PF14602 Hexapeptide repeat of succinyl-transferase C9I78_03445 PF07130 YebG protein C9I78_03450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_03450 PF03466 LysR substrate binding domain C9I78_03460 PF11893 Domain of unknown function (DUF3413) C9I78_03460 PF00884 Sulfatase C9I78_03465 PF17946 RecC C-terminal domain C9I78_03475 PF12705 PD-(D/E)XK nuclease superfamily C9I78_03475 PF00580 UvrD/REP helicase N-terminal domain C9I78_03475 PF13361 UvrD-like helicase C-terminal domain C9I78_03480 PF13538 UvrD-like helicase C-terminal domain C9I78_03490 PF00583 Acetyltransferase (GNAT) family C9I78_03490 PF00696 Amino acid kinase family C9I78_03505 PF03562 MltA specific insert domain C9I78_03505 PF06725 3D domain C9I78_03510 PF00899 ThiF family C9I78_03515 PF02657 Fe-S metabolism associated domain C9I78_03520 PF00990 Diguanylate cyclase, GGDEF domain C9I78_03520 PF17158 Membrane-associated sensor, integral membrane domain C9I78_03525 PF00266 Aminotransferase class-V C9I78_03530 PF01965 DJ-1/PfpI family C9I78_03535 PF08546 Ketopantoate reductase PanE/ApbA C terminal C9I78_03535 PF02558 Ketopantoate reductase PanE/ApbA C9I78_03540 PF03502 Nucleoside-specific channel-forming protein, Tsx C9I78_03560 PF04545 Sigma-70, region 4 C9I78_03560 PF04542 Sigma-70 region 2 C9I78_03570 PF07690 Major Facilitator Superfamily C9I78_03575 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C9I78_03580 PF08139 Prokaryotic membrane lipoprotein lipid attachment site C9I78_03580 PF03923 Uncharacterized lipoprotein C9I78_03585 PF05175 Methyltransferase small domain C9I78_03590 PF01722 BolA-like protein C9I78_03600 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) C9I78_03600 PF11973 NQRA C-terminal domain C9I78_03605 PF03116 NQR2, RnfD, RnfE family C9I78_03610 PF04205 FMN-binding domain C9I78_03615 PF02508 Rnf-Nqr subunit, membrane protein C9I78_03620 PF02508 Rnf-Nqr subunit, membrane protein C9I78_03625 PF00970 Oxidoreductase FAD-binding domain C9I78_03625 PF00175 Oxidoreductase NAD-binding domain C9I78_03625 PF00111 2Fe-2S iron-sulfur cluster binding domain C9I78_03630 PF02424 ApbE family C9I78_03645 PF00817 impB/mucB/samB family C9I78_03645 PF11799 impB/mucB/samB family C-terminal domain C9I78_03645 PF11798 IMS family HHH motif C9I78_03650 PF00271 Helicase conserved C-terminal domain C9I78_03650 PF00570 HRDC domain C9I78_03650 PF09382 RQC domain C9I78_03650 PF16124 RecQ zinc-binding C9I78_03650 PF00270 DEAD/DEAH box helicase C9I78_03655 PF03449 Transcription elongation factor, N-terminal C9I78_03655 PF01272 Transcription elongation factor, GreA/GreB, C-term C9I78_03670 PF00209 Sodium:neurotransmitter symporter family C9I78_03680 PF06786 Uncharacterised protein family (UPF0253) C9I78_03690 PF03129 Anticodon binding domain C9I78_03690 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C9I78_03690 PF04073 Aminoacyl-tRNA editing domain C9I78_03695 PF18389 TrmO C-terminal domain C9I78_03695 PF01980 tRNA-methyltransferase O C9I78_03700 PF01197 Ribosomal protein L31 C9I78_03705 PF00444 Ribosomal protein L36 C9I78_03715 PF03806 AbgT putative transporter family C9I78_03720 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 C9I78_03745 PF04287 tRNA pseudouridine synthase C C9I78_03750 PF00849 RNA pseudouridylate synthase C9I78_03755 PF11944 Protein of unknown function (DUF3461) C9I78_03760 PF01842 ACT domain C9I78_03760 PF08335 GlnD PII-uridylyltransferase C9I78_03760 PF01966 HD domain C9I78_03760 PF01909 Nucleotidyltransferase domain C9I78_03765 PF00557 Metallopeptidase family M24 C9I78_03770 PF00318 Ribosomal protein S2 C9I78_03775 PF00889 Elongation factor TS C9I78_03780 PF00696 Amino acid kinase family C9I78_03785 PF01765 Ribosome recycling factor C9I78_03790 PF01255 Putative undecaprenyl diphosphate synthase C9I78_03800 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain C9I78_03800 PF13288 DXP reductoisomerase C-terminal domain C9I78_03800 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase C9I78_03805 PF17820 PDZ domain C9I78_03805 PF02163 Peptidase family M50 C9I78_03810 PF01103 Surface antigen C9I78_03810 PF07244 Surface antigen variable number repeat C9I78_03815 PF03938 Outer membrane protein (OmpH-like) C9I78_03820 PF00132 Bacterial transferase hexapeptide (six repeats) C9I78_03820 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD C9I78_03825 PF07977 FabA-like domain C9I78_03830 PF00132 Bacterial transferase hexapeptide (six repeats) C9I78_03830 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 C9I78_03835 PF02684 Lipid-A-disaccharide synthetase C9I78_03840 PF01351 Ribonuclease HII C9I78_03845 PF02811 PHP domain C9I78_03845 PF01336 OB-fold nucleic acid binding domain C9I78_03845 PF14579 Helix-hairpin-helix motif C9I78_03845 PF07733 Bacterial DNA polymerase III alpha NTPase domain C9I78_03845 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C9I78_03850 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit C9I78_03855 PF11734 TilS substrate C-terminal domain C9I78_03855 PF01171 PP-loop family C9I78_03855 PF09179 TilS substrate binding domain C9I78_03860 PF00034 Cytochrome c C9I78_03865 PF00543 Nitrogen regulatory protein P-II C9I78_03870 PF03372 Endonuclease/Exonuclease/phosphatase family C9I78_03880 PF01476 LysM domain C9I78_03880 PF01464 Transglycosylase SLT domain C9I78_03885 PF00753 Metallo-beta-lactamase superfamily C9I78_03885 PF16123 Hydroxyacylglutathione hydrolase C-terminus C9I78_03890 PF08241 Methyltransferase domain C9I78_03895 PF00075 RNase H C9I78_03900 PF00929 Exonuclease C9I78_03925 PF01740 STAS domain C9I78_03925 PF00916 Sulfate permease family C9I78_03930 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C9I78_03930 PF02770 Acyl-CoA dehydrogenase, middle domain C9I78_03930 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C9I78_03930 PF09317 Domain of unknown function (DUF1974) C9I78_03935 PF13580 SIS domain C9I78_03940 PF13230 Glutamine amidotransferases class-II C9I78_03945 PF00551 Formyl transferase C9I78_03950 PF02769 AIR synthase related protein, C-terminal domain C9I78_03950 PF00586 AIR synthase related protein, N-terminal domain C9I78_03960 PF00860 Permease family C9I78_03975 PF03358 NADPH-dependent FMN reductase C9I78_03980 PF03960 ArsC family C9I78_03985 PF01435 Peptidase family M48 C9I78_03985 PF13181 Tetratricopeptide repeat C9I78_03995 PF01594 AI-2E family transporter C9I78_04000 PF00578 AhpC/TSA family C9I78_04005 PF01842 ACT domain C9I78_04010 PF00701 Dihydrodipicolinate synthetase family C9I78_04030 PF01546 Peptidase family M20/M25/M40 C9I78_04030 PF07687 Peptidase dimerisation domain C9I78_04035 PF03960 ArsC family C9I78_04060 PF11143 Protein of unknown function (DUF2919) C9I78_04065 PF04261 Dyp-type peroxidase family C9I78_04070 PF00669 Bacterial flagellin N-terminal helical region C9I78_04070 PF07196 Flagellin hook IN motif C9I78_04070 PF00700 Bacterial flagellin C-terminal helical region C9I78_04080 PF07196 Flagellin hook IN motif C9I78_04080 PF00669 Bacterial flagellin N-terminal helical region C9I78_04080 PF00700 Bacterial flagellin C-terminal helical region C9I78_04085 PF00669 Bacterial flagellin N-terminal helical region C9I78_04085 PF07196 Flagellin hook IN motif C9I78_04085 PF00700 Bacterial flagellin C-terminal helical region C9I78_04090 PF03646 FlaG protein C9I78_04095 PF07196 Flagellin hook IN motif C9I78_04095 PF02465 Flagellar hook-associated protein 2 N-terminus C9I78_04095 PF07195 Flagellar hook-associated protein 2 C-terminus C9I78_04105 PF02561 Flagellar protein FliS C9I78_04110 PF01590 GAF domain C9I78_04110 PF02954 Bacterial regulatory protein, Fis family C9I78_04110 PF00158 Sigma-54 interaction domain C9I78_04115 PF00512 His Kinase A (phospho-acceptor) domain C9I78_04115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_04120 PF02954 Bacterial regulatory protein, Fis family C9I78_04120 PF00072 Response regulator receiver domain C9I78_04120 PF00158 Sigma-54 interaction domain C9I78_04125 PF02049 Flagellar hook-basal body complex protein FliE C9I78_04130 PF01514 Secretory protein of YscJ/FliF family C9I78_04130 PF08345 Flagellar M-ring protein C-terminal C9I78_04135 PF14841 FliG middle domain C9I78_04135 PF14842 FliG N-terminal domain C9I78_04135 PF01706 FliG C-terminal domain C9I78_04145 PF18269 T3SS EscN ATPase C-terminal domain C9I78_04145 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C9I78_04165 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C9I78_04165 PF02154 Flagellar motor switch protein FliM C9I78_04170 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C9I78_04175 PF04347 Flagellar biosynthesis protein, FliO C9I78_04180 PF00813 FliP family C9I78_04185 PF01313 Bacterial export proteins, family 3 C9I78_04190 PF01311 Bacterial export proteins, family 1 C9I78_04195 PF01312 FlhB HrpN YscU SpaS Family C9I78_04200 PF00771 FHIPEP family C9I78_04205 PF00448 SRP54-type protein, GTPase domain C9I78_04210 PF10609 NUBPL iron-transfer P-loop NTPase C9I78_04215 PF04545 Sigma-70, region 4 C9I78_04215 PF04542 Sigma-70 region 2 C9I78_04215 PF04539 Sigma-70 region 3 C9I78_04220 PF00072 Response regulator receiver domain C9I78_04225 PF04344 Chemotaxis phosphatase, CheZ C9I78_04230 PF01584 CheW-like domain C9I78_04230 PF02895 Signal transducing histidine kinase, homodimeric domain C9I78_04230 PF07194 P2 response regulator binding domain C9I78_04230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_04230 PF01627 Hpt domain C9I78_04235 PF00072 Response regulator receiver domain C9I78_04235 PF01339 CheB methylesterase C9I78_04240 PF13614 AAA domain C9I78_04250 PF01584 CheW-like domain C9I78_04260 PF00005 ABC transporter C9I78_04265 PF03379 CcmB protein C9I78_04270 PF01578 Cytochrome C assembly protein C9I78_04275 PF04995 Heme exporter protein D (CcmD) C9I78_04280 PF03100 CcmE C9I78_04285 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal C9I78_04285 PF01578 Cytochrome C assembly protein C9I78_04290 PF08534 Redoxin C9I78_04295 PF03918 Cytochrome C biogenesis protein C9I78_04305 PF04333 MlaA lipoprotein C9I78_04310 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) C9I78_04315 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) C9I78_04325 PF04542 Sigma-70 region 2 C9I78_04325 PF08281 Sigma-70, region 4 C9I78_04335 PF00108 Thiolase, N-terminal domain C9I78_04335 PF02803 Thiolase, C-terminal domain C9I78_04340 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C9I78_04340 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C9I78_04340 PF00378 Enoyl-CoA hydratase/isomerase C9I78_04350 PF00675 Insulinase (Peptidase family M16) C9I78_04350 PF05193 Peptidase M16 inactive domain C9I78_04350 PF16187 Middle or third domain of peptidase_M16 C9I78_04355 PF00300 Histidine phosphatase superfamily (branch 1) C9I78_04360 PF01713 Smr domain C9I78_04365 PF05175 Methyltransferase small domain C9I78_04370 PF01264 Chorismate synthase C9I78_04375 PF03458 UPF0126 domain C9I78_04385 PF04315 Elongation factor P hydroxylase C9I78_04390 PF08891 YfcL protein C9I78_04400 PF03358 NADPH-dependent FMN reductase C9I78_04405 PF01266 FAD dependent oxidoreductase C9I78_04405 PF05430 S-adenosyl-L-methionine-dependent methyltransferase C9I78_04410 PF02801 Beta-ketoacyl synthase, C-terminal domain C9I78_04410 PF00109 Beta-ketoacyl synthase, N-terminal domain C9I78_04420 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C9I78_04420 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C9I78_04420 PF11890 Domain of unknown function (DUF3410) C9I78_04425 PF02774 Semialdehyde dehydrogenase, dimerisation domain C9I78_04425 PF01118 Semialdehyde dehydrogenase, NAD binding domain C9I78_04435 PF01416 tRNA pseudouridine synthase C9I78_04440 PF01039 Carboxyl transferase domain C9I78_04440 PF17848 Acetyl-coA carboxylase zinc finger domain C9I78_04445 PF08245 Mur ligase middle domain C9I78_04445 PF02875 Mur ligase family, glutamate ligase domain C9I78_04450 PF05036 Sporulation related domain C9I78_04455 PF02674 Colicin V production protein C9I78_04460 PF00156 Phosphoribosyl transferase domain C9I78_04465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_04465 PF03466 LysR substrate binding domain C9I78_04470 PF00072 Response regulator receiver domain C9I78_04480 PF04304 Protein of unknown function (DUF454) C9I78_04485 PF00156 Phosphoribosyl transferase domain C9I78_04490 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding C9I78_04490 PF12169 DNA polymerase III subunits gamma and tau domain III C9I78_04490 PF12170 DNA polymerase III tau subunit V interacting with alpha C9I78_04495 PF02575 YbaB/EbfC DNA-binding family C9I78_04500 PF13662 Toprim domain C9I78_04500 PF02132 RecR protein C9I78_04505 PF00230 Major intrinsic protein C9I78_04515 PF01042 Endoribonuclease L-PSP C9I78_04520 PF03313 Serine dehydratase alpha chain C9I78_04530 PF03692 Putative zinc- or iron-chelating domain C9I78_04535 PF04226 Transglycosylase associated protein C9I78_04540 PF03692 Putative zinc- or iron-chelating domain C9I78_04545 PF05552 Conserved TM helix C9I78_04545 PF00924 Mechanosensitive ion channel C9I78_04550 PF03992 Antibiotic biosynthesis monooxygenase C9I78_04555 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C9I78_04565 PF00245 Alkaline phosphatase C9I78_04585 PF13847 Methyltransferase domain C9I78_04590 PF00672 HAMP domain C9I78_04590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C9I78_04590 PF02743 Cache domain C9I78_04595 PF01263 Aldose 1-epimerase C9I78_04600 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C9I78_04600 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C9I78_04605 PF01641 SelR domain C9I78_04615 PF07023 Protein of unknown function (DUF1315) C9I78_04620 PF17763 Glutaminase/Asparaginase C-terminal domain C9I78_04620 PF00710 Asparaginase, N-terminal C9I78_04625 PF01343 Peptidase family S49 C9I78_04630 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C9I78_04630 PF07992 Pyridine nucleotide-disulphide oxidoreductase C9I78_04635 PF00881 Nitroreductase family C9I78_04640 PF01131 DNA topoisomerase C9I78_04640 PF01751 Toprim domain C9I78_04655 PF00106 short chain dehydrogenase C9I78_04660 PF00850 Histone deacetylase domain C9I78_04670 PF11893 Domain of unknown function (DUF3413) C9I78_04670 PF00884 Sulfatase C9I78_04675 PF07208 Protein of unknown function (DUF1414) C9I78_04680 PF04245 37-kD nucleoid-associated bacterial protein C9I78_04695 PF03553 Na+/H+ antiporter family C9I78_04700 PF01118 Semialdehyde dehydrogenase, NAD binding domain C9I78_04700 PF02774 Semialdehyde dehydrogenase, dimerisation domain C9I78_04705 PF00520 Ion transport protein C9I78_04705 PF00027 Cyclic nucleotide-binding domain C9I78_04710 PF01914 MarC family integral membrane protein C9I78_04715 PF00465 Iron-containing alcohol dehydrogenase C9I78_04715 PF00171 Aldehyde dehydrogenase family C9I78_04730 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C9I78_04730 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C9I78_04735 PF00462 Glutaredoxin C9I78_04745 PF03553 Na+/H+ antiporter family C9I78_04745 PF13726 Na+-H+ antiporter family C9I78_04750 PF00929 Exonuclease C9I78_04765 PF18393 MotY N-terminal domain C9I78_04765 PF00691 OmpA family C9I78_04770 PF10952 Protein of unknown function (DUF2753) C9I78_04775 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C9I78_04780 PF00633 Helix-hairpin-helix motif C9I78_04780 PF00730 HhH-GPD superfamily base excision DNA repair protein C9I78_04780 PF10576 Iron-sulfur binding domain of endonuclease III C9I78_04785 PF02508 Rnf-Nqr subunit, membrane protein C9I78_04790 PF04205 FMN-binding domain C9I78_04795 PF03116 NQR2, RnfD, RnfE family C9I78_04800 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C9I78_04800 PF12838 4Fe-4S dicluster domain C9I78_04800 PF13375 RnfC Barrel sandwich hybrid domain C9I78_04800 PF10531 SLBB domain C9I78_04805 PF04060 Putative Fe-S cluster C9I78_04810 PF02508 Rnf-Nqr subunit, membrane protein C9I78_04825 PF12344 Ultra-violet resistance protein B C9I78_04825 PF02151 UvrB/uvrC motif C9I78_04825 PF04851 Type III restriction enzyme, res subunit C9I78_04825 PF00271 Helicase conserved C-terminal domain C9I78_04825 PF17757 UvrB interaction domain C9I78_04830 PF02954 Bacterial regulatory protein, Fis family C9I78_04830 PF00158 Sigma-54 interaction domain C9I78_04830 PF00072 Response regulator receiver domain C9I78_04835 PF01627 Hpt domain C9I78_04840 PF01933 Uncharacterised protein family UPF0052 C9I78_04845 PF04055 Radical SAM superfamily C9I78_04845 PF06463 Molybdenum Cofactor Synthesis C C9I78_04850 PF00994 Probable molybdopterin binding domain C9I78_04855 PF01967 MoaC family C9I78_04860 PF02597 ThiS family C9I78_04865 PF02391 MoaE protein C9I78_04870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C9I78_04875 PF00528 Binding-protein-dependent transport system inner membrane component C9I78_04880 PF12911 N-terminal TM domain of oligopeptide transport permease C C9I78_04880 PF00528 Binding-protein-dependent transport system inner membrane component C9I78_04885 PF00005 ABC transporter C9I78_04885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C9I78_04890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C9I78_04890 PF00005 ABC transporter C9I78_04895 PF13409 Glutathione S-transferase, N-terminal domain C9I78_04905 PF13194 Domain of unknown function (DUF4010) C9I78_04910 PF01515 Phosphate acetyl/butaryl transferase C9I78_04910 PF07085 DRTGG domain C9I78_04915 PF00871 Acetokinase family C9I78_04920 PF04217 Protein of unknown function, DUF412 C9I78_04930 PF02653 Branched-chain amino acid transport system / permease component C9I78_04935 PF00005 ABC transporter C9I78_04940 PF02903 Alpha amylase, N-terminal ig-like domain C9I78_04940 PF00128 Alpha amylase, catalytic domain C9I78_04945 PF00990 Diguanylate cyclase, GGDEF domain C9I78_04945 PF00072 Response regulator receiver domain C9I78_04950 PF01207 Dihydrouridine synthase (Dus) C9I78_04955 PF02810 SEC-C motif C9I78_04955 PF07516 SecA Wing and Scaffold domain C9I78_04955 PF01043 SecA preprotein cross-linking domain C9I78_04955 PF07517 SecA DEAD-like domain C9I78_04960 PF02600 Disulfide bond formation protein DsbB C9I78_04965 PF06450 Bacterial Na+/H+ antiporter B (NhaB) C9I78_04970 PF00392 Bacterial regulatory proteins, gntR family C9I78_04970 PF07840 FadR C-terminal domain C9I78_04980 PF09334 tRNA synthetases class I (M) C9I78_04980 PF01588 Putative tRNA binding domain C9I78_04985 PF10609 NUBPL iron-transfer P-loop NTPase C9I78_04990 PF00485 Phosphoribulokinase / Uridine kinase family C9I78_05000 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP C9I78_05000 PF12557 Cob(I)alamin adenosyltransferase N terminal C9I78_05005 PF01451 Low molecular weight phosphotyrosine protein phosphatase C9I78_05010 PF00916 Sulfate permease family C9I78_05010 PF01740 STAS domain C9I78_05020 PF00575 S1 RNA binding domain C9I78_05020 PF12111 Polyribonucleotide phosphorylase C terminal C9I78_05020 PF10150 Ribonuclease E/G family C9I78_05035 PF00849 RNA pseudouridylate synthase C9I78_05035 PF01479 S4 domain C9I78_05040 PF02545 Maf-like protein C9I78_05045 PF02620 Large ribosomal RNA subunit accumulation protein YceD C9I78_05050 PF01783 Ribosomal L32p protein family C9I78_05055 PF02504 Fatty acid synthesis protein C9I78_05060 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C9I78_05060 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C9I78_05065 PF00698 Acyl transferase domain C9I78_05075 PF00550 Phosphopantetheine attachment site C9I78_05080 PF02801 Beta-ketoacyl synthase, C-terminal domain C9I78_05080 PF00109 Beta-ketoacyl synthase, N-terminal domain C9I78_05085 PF01063 Amino-transferase class IV C9I78_05090 PF02618 YceG-like family C9I78_05095 PF02223 Thymidylate kinase C9I78_05100 PF09115 DNA polymerase III, delta subunit, C terminal C9I78_05105 PF01026 TatD related DNase C9I78_05110 PF00367 phosphotransferase system, EIIB C9I78_05110 PF02378 Phosphotransferase system, EIIC C9I78_05130 PF00209 Sodium:neurotransmitter symporter family C9I78_05145 PF01734 Patatin-like phospholipase C9I78_05150 PF02887 Pyruvate kinase, alpha/beta domain C9I78_05150 PF00224 Pyruvate kinase, barrel domain C9I78_05155 PF00480 ROK family C9I78_05160 PF00072 Response regulator receiver domain C9I78_05160 PF01584 CheW-like domain C9I78_05165 PF07733 Bacterial DNA polymerase III alpha NTPase domain C9I78_05165 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C9I78_05165 PF14579 Helix-hairpin-helix motif C9I78_05165 PF02811 PHP domain C9I78_05165 PF01336 OB-fold nucleic acid binding domain C9I78_05180 PF00106 short chain dehydrogenase C9I78_05185 PF08496 Peptidase family S49 N-terminal C9I78_05185 PF01343 Peptidase family S49 C9I78_05190 PF02224 Cytidylate kinase C9I78_05195 PF00575 S1 RNA binding domain C9I78_05200 PF00216 Bacterial DNA-binding protein C9I78_05205 PF06305 Lipopolysaccharide assembly protein A domain C9I78_05210 PF18073 Rubredoxin metal binding domain C9I78_05215 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family C9I78_05220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C9I78_05230 PF01370 NAD dependent epimerase/dehydratase family C9I78_05235 PF00535 Glycosyl transferase family 2 C9I78_05245 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase C9I78_05255 PF02470 MlaD protein C9I78_05260 PF04403 Paraquat-inducible protein A C9I78_05265 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C9I78_05270 PF00034 Cytochrome c C9I78_05275 PF01568 Molydopterin dinucleotide binding domain C9I78_05275 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C9I78_05275 PF00384 Molybdopterin oxidoreductase C9I78_05280 PF03916 Polysulphide reductase, NrfD C9I78_05285 PF13247 4Fe-4S dicluster domain C9I78_05290 PF00512 His Kinase A (phospho-acceptor) domain C9I78_05290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_05295 PF00196 Bacterial regulatory proteins, luxR family C9I78_05295 PF00072 Response regulator receiver domain C9I78_05300 PF03466 LysR substrate binding domain C9I78_05300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_05310 PF02683 Cytochrome C biogenesis protein transmembrane region C9I78_05310 PF11412 Disulphide bond corrector protein DsbC C9I78_05315 PF00085 Thioredoxin C9I78_05330 PF01938 TRAM domain C9I78_05330 PF05958 tRNA (Uracil-5-)-methyltransferase C9I78_05345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C9I78_05355 PF00005 ABC transporter C9I78_05355 PF02687 FtsX-like permease family C9I78_05355 PF12704 MacB-like periplasmic core domain C9I78_05360 PF12704 MacB-like periplasmic core domain C9I78_05360 PF02687 FtsX-like permease family C9I78_05360 PF00005 ABC transporter C9I78_05365 PF00005 ABC transporter C9I78_05365 PF12704 MacB-like periplasmic core domain C9I78_05365 PF02687 FtsX-like permease family C9I78_05370 PF00857 Isochorismatase family C9I78_05375 PF12833 Helix-turn-helix domain C9I78_05375 PF02311 AraC-like ligand binding domain C9I78_05385 PF08267 Cobalamin-independent synthase, N-terminal domain C9I78_05385 PF01717 Cobalamin-independent synthase, Catalytic domain C9I78_05395 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C9I78_05395 PF00529 HlyD membrane-fusion protein of T1SS C9I78_05400 PF03466 LysR substrate binding domain C9I78_05400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_05420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_05420 PF00672 HAMP domain C9I78_05420 PF00512 His Kinase A (phospho-acceptor) domain C9I78_05425 PF00486 Transcriptional regulatory protein, C terminal C9I78_05425 PF00072 Response regulator receiver domain C9I78_05435 PF00672 HAMP domain C9I78_05435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C9I78_05440 PF08497 Radical SAM N-terminal C9I78_05440 PF04055 Radical SAM superfamily C9I78_05440 PF11842 Domain of unknown function (DUF3362) C9I78_05445 PF00360 Phytochrome region C9I78_05445 PF00990 Diguanylate cyclase, GGDEF domain C9I78_05445 PF00563 EAL domain C9I78_05445 PF01590 GAF domain C9I78_05460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_05460 PF03466 LysR substrate binding domain C9I78_05470 PF08267 Cobalamin-independent synthase, N-terminal domain C9I78_05470 PF01717 Cobalamin-independent synthase, Catalytic domain C9I78_05480 PF03795 YCII-related domain C9I78_05485 PF03061 Thioesterase superfamily C9I78_05490 PF04279 Intracellular septation protein A C9I78_05500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_05500 PF00072 Response regulator receiver domain C9I78_05505 PF17327 Acyl homoserine lactone synthase C9I78_05510 PF00375 Sodium:dicarboxylate symporter family C9I78_05520 PF00501 AMP-binding enzyme C9I78_05520 PF13193 AMP-binding enzyme C-terminal domain C9I78_05525 PF00027 Cyclic nucleotide-binding domain C9I78_05525 PF13545 Crp-like helix-turn-helix domain C9I78_05530 PF00290 Tryptophan synthase alpha chain C9I78_05535 PF00291 Pyridoxal-phosphate dependent enzyme C9I78_05540 PF00218 Indole-3-glycerol phosphate synthase C9I78_05540 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase C9I78_05545 PF02885 Glycosyl transferase family, helical bundle domain C9I78_05545 PF00591 Glycosyl transferase family, a/b domain C9I78_05550 PF00117 Glutamine amidotransferase class-I C9I78_05555 PF00425 chorismate binding enzyme C9I78_05555 PF04715 Anthranilate synthase component I, N terminal region C9I78_05560 PF08056 Tryptophan operon leader peptide C9I78_05565 PF02811 PHP domain C9I78_05570 PF01300 Telomere recombination C9I78_05580 PF01479 S4 domain C9I78_05580 PF00849 RNA pseudouridylate synthase C9I78_05590 PF04269 Protein of unknown function, DUF440 C9I78_05595 PF08207 Elongation factor P (EF-P) KOW-like domain C9I78_05595 PF09285 Elongation factor P, C-terminal C9I78_05595 PF01132 Elongation factor P (EF-P) OB domain C9I78_05605 PF03104 DNA polymerase family B, exonuclease domain C9I78_05605 PF00136 DNA polymerase family B C9I78_05610 PF00072 Response regulator receiver domain C9I78_05610 PF00196 Bacterial regulatory proteins, luxR family C9I78_05615 PF02151 UvrB/uvrC motif C9I78_05615 PF08459 UvrC Helix-hairpin-helix N-terminal C9I78_05615 PF01541 GIY-YIG catalytic domain C9I78_05620 PF01066 CDP-alcohol phosphatidyltransferase C9I78_05645 PF00202 Aminotransferase class-III C9I78_05650 PF03435 Saccharopine dehydrogenase NADP binding domain C9I78_05650 PF16653 Saccharopine dehydrogenase C-terminal domain C9I78_05655 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C9I78_05670 PF00994 Probable molybdopterin binding domain C9I78_05680 PF00268 Ribonucleotide reductase, small chain C9I78_05685 PF02867 Ribonucleotide reductase, barrel domain C9I78_05685 PF03477 ATP cone domain C9I78_05685 PF00317 Ribonucleotide reductase, all-alpha domain C9I78_05695 PF00521 DNA gyrase/topoisomerase IV, subunit A C9I78_05695 PF03989 DNA gyrase C-terminal domain, beta-propeller C9I78_05710 PF02335 Cytochrome c552 C9I78_05720 PF13247 4Fe-4S dicluster domain C9I78_05725 PF03916 Polysulphide reductase, NrfD C9I78_05730 PF01578 Cytochrome C assembly protein C9I78_05730 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal C9I78_05735 PF08534 Redoxin C9I78_05740 PF03918 Cytochrome C biogenesis protein C9I78_05750 PF00925 GTP cyclohydrolase II C9I78_05775 PF03734 L,D-transpeptidase catalytic domain C9I78_05775 PF01471 Putative peptidoglycan binding domain C9I78_05780 PF05951 Bacterial protein of unknown function (DUF882) C9I78_05785 PF00753 Metallo-beta-lactamase superfamily C9I78_05800 PF03480 Bacterial extracellular solute-binding protein, family 7 C9I78_05810 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component C9I78_05815 PF07730 Histidine kinase C9I78_05815 PF17200 Single Cache domain 2 C9I78_05820 PF00196 Bacterial regulatory proteins, luxR family C9I78_05820 PF00072 Response regulator receiver domain C9I78_05825 PF01047 MarR family C9I78_05830 PF02028 BCCT, betaine/carnitine/choline family transporter C9I78_05835 PF00672 HAMP domain C9I78_05835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C9I78_05855 PF00155 Aminotransferase class I and II C9I78_05880 PF00392 Bacterial regulatory proteins, gntR family C9I78_05880 PF00155 Aminotransferase class I and II C9I78_05890 PF01336 OB-fold nucleic acid binding domain C9I78_05890 PF00152 tRNA synthetases class II (D, K and N) C9I78_05895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C9I78_05895 PF00672 HAMP domain C9I78_05895 PF02743 Cache domain C9I78_05900 PF01242 6-pyruvoyl tetrahydropterin synthase C9I78_05910 PF00563 EAL domain C9I78_05910 PF04940 Sensors of blue-light using FAD C9I78_05915 PF03313 Serine dehydratase alpha chain C9I78_05915 PF03315 Serine dehydratase beta chain C9I78_05920 PF03222 Tryptophan/tyrosine permease family C9I78_05925 PF00293 NUDIX domain C9I78_05940 PF04715 Anthranilate synthase component I, N terminal region C9I78_05940 PF00425 chorismate binding enzyme C9I78_05960 PF04317 YcjX-like family, DUF463 C9I78_05965 PF05128 Domain of unknown function (DUF697) C9I78_05970 PF00158 Sigma-54 interaction domain C9I78_05970 PF18024 Helix-turn-helix domain C9I78_05975 PF13302 Acetyltransferase (GNAT) domain C9I78_05990 PF00589 Phage integrase family C9I78_05990 PF13495 Phage integrase, N-terminal SAM-like domain C9I78_06015 PF13276 HTH-like domain C9I78_06015 PF00665 Integrase core domain C9I78_06015 PF13333 Integrase core domain C9I78_06115 PF01337 Barstar (barnase inhibitor) C9I78_06155 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C9I78_06365 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C9I78_06450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C9I78_06595 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C9I78_06660 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system C9I78_06665 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system C9I78_06675 PF13333 Integrase core domain C9I78_06675 PF00665 Integrase core domain C9I78_06675 PF13276 HTH-like domain C9I78_06680 PF13276 HTH-like domain C9I78_06680 PF00665 Integrase core domain C9I78_06680 PF13333 Integrase core domain C9I78_06730 PF03553 Na+/H+ antiporter family C9I78_06735 PF00120 Glutamine synthetase, catalytic domain C9I78_06745 PF07722 Peptidase C26 C9I78_06750 PF01381 Helix-turn-helix C9I78_06750 PF07883 Cupin domain C9I78_06755 PF00171 Aldehyde dehydrogenase family C9I78_06760 PF01266 FAD dependent oxidoreductase C9I78_06765 PF00795 Carbon-nitrogen hydrolase C9I78_06770 PF04371 Porphyromonas-type peptidyl-arginine deiminase C9I78_06775 PF00171 Aldehyde dehydrogenase family C9I78_06780 PF00202 Aminotransferase class-III C9I78_06785 PF02833 DHHA2 domain C9I78_06785 PF01368 DHH family C9I78_06795 PF00563 EAL domain C9I78_06795 PF00196 Bacterial regulatory proteins, luxR family C9I78_06820 PF01047 MarR family C9I78_06825 PF04237 YjbR C9I78_06835 PF01928 CYTH domain C9I78_06845 PF12464 Maltose acetyltransferase C9I78_06845 PF00132 Bacterial transferase hexapeptide (six repeats) C9I78_06860 PF00512 His Kinase A (phospho-acceptor) domain C9I78_06860 PF01627 Hpt domain C9I78_06860 PF00072 Response regulator receiver domain C9I78_06860 PF00672 HAMP domain C9I78_06860 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C9I78_06860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_06865 PF00563 EAL domain C9I78_06865 PF00990 Diguanylate cyclase, GGDEF domain C9I78_06865 PF03707 Bacterial signalling protein N terminal repeat C9I78_06880 PF04204 Homoserine O-succinyltransferase C9I78_06895 PF13520 Amino acid permease C9I78_06905 PF03279 Bacterial lipid A biosynthesis acyltransferase C9I78_06910 PF02074 Carboxypeptidase Taq (M32) metallopeptidase C9I78_06915 PF01810 LysE type translocator C9I78_06925 PF01235 Sodium:alanine symporter family C9I78_06950 PF00884 Sulfatase C9I78_06955 PF00512 His Kinase A (phospho-acceptor) domain C9I78_06955 PF08521 Two-component sensor kinase N-terminal C9I78_06955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_06960 PF00486 Transcriptional regulatory protein, C terminal C9I78_06960 PF00072 Response regulator receiver domain C9I78_06980 PF00501 AMP-binding enzyme C9I78_06990 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C9I78_06995 PF00528 Binding-protein-dependent transport system inner membrane component C9I78_07000 PF00005 ABC transporter C9I78_07000 PF00571 CBS domain C9I78_07015 PF02028 BCCT, betaine/carnitine/choline family transporter C9I78_07020 PF00583 Acetyltransferase (GNAT) family C9I78_07025 PF00202 Aminotransferase class-III C9I78_07030 PF06339 Ectoine synthase C9I78_07035 PF13840 ACT domain C9I78_07035 PF00696 Amino acid kinase family C9I78_07050 PF00034 Cytochrome c C9I78_07050 PF03150 Di-haem cytochrome c peroxidase C9I78_07065 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C9I78_07080 PF00989 PAS fold C9I78_07080 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain C9I78_07080 PF17203 Single cache domain 3 C9I78_07080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_07085 PF12431 Transcriptional regulator C9I78_07085 PF00072 Response regulator receiver domain C9I78_07090 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain C9I78_07090 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain C9I78_07095 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase C9I78_07100 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain C9I78_07100 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C9I78_07115 PF01590 GAF domain C9I78_07115 PF00158 Sigma-54 interaction domain C9I78_07115 PF02954 Bacterial regulatory protein, Fis family C9I78_07120 PF00171 Aldehyde dehydrogenase family C9I78_07140 PF12833 Helix-turn-helix domain C9I78_07160 PF16697 Inner membrane component of T3SS, cytoplasmic domain C9I78_07160 PF16693 Inner membrane component of T3SS, periplasmic domain C9I78_07170 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF C9I78_07175 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) C9I78_07185 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI C9I78_07190 PF01514 Secretory protein of YscJ/FliF family C9I78_07200 PF02108 Flagellar assembly protein FliH C9I78_07210 PF02661 Fic/DOC family C9I78_07245 PF13533 Biotin-lipoyl like C9I78_07255 PF08360 QacR-like protein, C-terminal region C9I78_07255 PF00440 Bacterial regulatory proteins, tetR family C9I78_07260 PF01312 FlhB HrpN YscU SpaS Family C9I78_07265 PF01311 Bacterial export proteins, family 1 C9I78_07270 PF01313 Bacterial export proteins, family 3 C9I78_07275 PF00813 FliP family C9I78_07280 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C9I78_07295 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C9I78_07295 PF02874 ATP synthase alpha/beta family, beta-barrel domain C9I78_07295 PF18269 T3SS EscN ATPase C-terminal domain C9I78_07300 PF07201 HrpJ-like domain C9I78_07305 PF09059 TyeA C9I78_07325 PF00771 FHIPEP family C9I78_07330 PF09621 Type III secretion system regulator (LcrR) C9I78_07335 PF07216 LcrG protein C9I78_07340 PF04792 V antigen (LcrV) protein C9I78_07345 PF07720 Tetratricopeptide repeat C9I78_07355 PF05844 YopD protein C9I78_07365 PF01925 Sulfite exporter TauE/SafE C9I78_07370 PF01970 Tripartite tricarboxylate transporter TctA family C9I78_07400 PF00285 Citrate synthase, C-terminal domain C9I78_07405 PF00694 Aconitase C-terminal domain C9I78_07405 PF00330 Aconitase family (aconitate hydratase) C9I78_07410 PF04303 PrpF protein C9I78_07415 PF13193 AMP-binding enzyme C-terminal domain C9I78_07415 PF00501 AMP-binding enzyme C9I78_07415 PF16177 Acetyl-coenzyme A synthetase N-terminus C9I78_07420 PF00583 Acetyltransferase (GNAT) family C9I78_07425 PF00089 Trypsin C9I78_07440 PF04055 Radical SAM superfamily C9I78_07445 PF06508 Queuosine biosynthesis protein QueC C9I78_07450 PF17158 Membrane-associated sensor, integral membrane domain C9I78_07450 PF00990 Diguanylate cyclase, GGDEF domain C9I78_07460 PF05736 OprF membrane domain C9I78_07460 PF00691 OmpA family C9I78_07475 PF05736 OprF membrane domain C9I78_07475 PF00691 OmpA family C9I78_07490 PF17785 PUA-like domain C9I78_07490 PF10672 S-adenosylmethionine-dependent methyltransferase C9I78_07495 PF00672 HAMP domain C9I78_07495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C9I78_07495 PF02743 Cache domain C9I78_07500 PF00708 Acylphosphatase C9I78_07505 PF04358 DsrC like protein C9I78_07515 PF01027 Inhibitor of apoptosis-promoting Bax1 C9I78_07520 PF00005 ABC transporter C9I78_07525 PF00528 Binding-protein-dependent transport system inner membrane component C9I78_07530 PF00528 Binding-protein-dependent transport system inner membrane component C9I78_07535 PF00497 Bacterial extracellular solute-binding proteins, family 3 C9I78_07545 PF10414 Sirohaem synthase dimerisation region C9I78_07545 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C9I78_07545 PF14824 Sirohaem biosynthesis protein central C9I78_07555 PF04461 Protein of unknown function (DUF520) C9I78_07560 PF00793 DAHP synthetase I family C9I78_07580 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF C9I78_07580 PF01189 16S rRNA methyltransferase RsmB/F C9I78_07580 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF C9I78_07590 PF02470 MlaD protein C9I78_07595 PF04403 Paraquat-inducible protein A C9I78_07600 PF00664 ABC transporter transmembrane region C9I78_07600 PF00005 ABC transporter C9I78_07605 PF13185 GAF domain C9I78_07610 PF17516 ProQ C-terminal domain C9I78_07610 PF04352 ProQ/FINO family C9I78_07615 PF03572 Peptidase family S41 C9I78_07615 PF17804 Tail specific protease N-terminal domain C9I78_07615 PF11818 C-terminal domain of tail specific protease (DUF3340) C9I78_07615 PF00595 PDZ domain C9I78_07625 PF01433 Peptidase family M1 domain C9I78_07625 PF17432 Domain of unknown function (DUF3458_C) ARM repeats C9I78_07625 PF11940 Domain of unknown function (DUF3458) Ig-like fold C9I78_07635 PF05088 Bacterial NAD-glutamate dehydrogenase C9I78_07640 PF01180 Dihydroorotate dehydrogenase C9I78_07645 PF07126 Cell-division protein ZapC C9I78_07655 PF01170 Putative RNA methylase family UPF0020 C9I78_07655 PF10672 S-adenosylmethionine-dependent methyltransferase C9I78_07655 PF02926 THUMP domain C9I78_07675 PF04957 Ribosome modulation factor C9I78_07680 PF07977 FabA-like domain C9I78_07685 PF05362 Lon protease (S16) C-terminal proteolytic domain C9I78_07685 PF13654 AAA domain C9I78_07690 PF17414 MatP C-terminal ribbon-helix-helix domain C9I78_07690 PF06303 MatP N-terminal domain C9I78_07725 PF05840 Bacteriophage replication gene A protein (GPA) C9I78_07830 PF00512 His Kinase A (phospho-acceptor) domain C9I78_07830 PF09308 LuxQ, periplasmic C9I78_07830 PF00072 Response regulator receiver domain C9I78_07830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_07845 PF00115 Cytochrome C and Quinol oxidase polypeptide I C9I78_07860 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP C9I78_07860 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C9I78_07870 PF00403 Heavy-metal-associated domain C9I78_07885 PF00027 Cyclic nucleotide-binding domain C9I78_07885 PF13545 Crp-like helix-turn-helix domain C9I78_07890 PF00582 Universal stress protein family C9I78_07900 PF01171 PP-loop family C9I78_07920 PF08402 TOBE domain C9I78_07920 PF00005 ABC transporter C9I78_07925 PF00528 Binding-protein-dependent transport system inner membrane component C9I78_07930 PF00528 Binding-protein-dependent transport system inner membrane component C9I78_07935 PF13416 Bacterial extracellular solute-binding protein C9I78_07940 PF13416 Bacterial extracellular solute-binding protein C9I78_07945 PF02146 Sir2 family C9I78_07955 PF00909 Ammonium Transporter Family C9I78_08010 PF13247 4Fe-4S dicluster domain C9I78_08015 PF01568 Molydopterin dinucleotide binding domain C9I78_08015 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C9I78_08015 PF00384 Molybdopterin oxidoreductase C9I78_08025 PF02613 Nitrate reductase delta subunit C9I78_08050 PF02634 FdhD/NarQ family C9I78_08055 PF00005 ABC transporter C9I78_08055 PF12848 ABC transporter C9I78_08065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_08065 PF00512 His Kinase A (phospho-acceptor) domain C9I78_08070 PF00072 Response regulator receiver domain C9I78_08070 PF02954 Bacterial regulatory protein, Fis family C9I78_08070 PF00158 Sigma-54 interaction domain C9I78_08080 PF12849 PBP superfamily domain C9I78_08085 PF00528 Binding-protein-dependent transport system inner membrane component C9I78_08090 PF00005 ABC transporter C9I78_08090 PF08402 TOBE domain C9I78_08095 PF12804 MobA-like NTP transferase domain C9I78_08100 PF00994 Probable molybdopterin binding domain C9I78_08100 PF03454 MoeA C-terminal region (domain IV) C9I78_08100 PF03453 MoeA N-terminal region (domain I and II) C9I78_08110 PF00480 ROK family C9I78_08150 PF17202 Single cache domain 3 C9I78_08150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C9I78_08150 PF00672 HAMP domain C9I78_08155 PF00877 NlpC/P60 family C9I78_08165 PF00990 Diguanylate cyclase, GGDEF domain C9I78_08165 PF05230 MASE2 domain C9I78_08170 PF00072 Response regulator receiver domain C9I78_08170 PF01339 CheB methylesterase C9I78_08185 PF00677 Lumazine binding domain C9I78_08190 PF01554 MatE C9I78_08200 PF01068 ATP dependent DNA ligase domain C9I78_08200 PF14743 DNA ligase OB-like domain C9I78_08205 PF01740 STAS domain C9I78_08215 PF02563 Polysaccharide biosynthesis/export protein C9I78_08215 PF10531 SLBB domain C9I78_08235 PF02954 Bacterial regulatory protein, Fis family C9I78_08235 PF00158 Sigma-54 interaction domain C9I78_08235 PF00072 Response regulator receiver domain C9I78_08240 PF00534 Glycosyl transferases group 1 C9I78_08240 PF13439 Glycosyltransferase Family 4 C9I78_08245 PF00534 Glycosyl transferases group 1 C9I78_08245 PF13439 Glycosyltransferase Family 4 C9I78_08280 PF00534 Glycosyl transferases group 1 C9I78_08280 PF13439 Glycosyltransferase Family 4 C9I78_08285 PF00535 Glycosyl transferase family 2 C9I78_08290 PF02397 Bacterial sugar transferase C9I78_08300 PF02028 BCCT, betaine/carnitine/choline family transporter C9I78_08315 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold C9I78_08315 PF00270 DEAD/DEAH box helicase C9I78_08315 PF00271 Helicase conserved C-terminal domain C9I78_08315 PF04408 Helicase associated domain (HA2) C9I78_08315 PF11898 Domain of unknown function (DUF3418) C9I78_08320 PF02525 Flavodoxin-like fold C9I78_08330 PF02613 Nitrate reductase delta subunit C9I78_08335 PF04976 DMSO reductase anchor subunit (DmsC) C9I78_08340 PF12800 4Fe-4S binding domain C9I78_08340 PF13247 4Fe-4S dicluster domain C9I78_08345 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C9I78_08345 PF00384 Molybdopterin oxidoreductase C9I78_08345 PF01568 Molydopterin dinucleotide binding domain C9I78_08375 PF17158 Membrane-associated sensor, integral membrane domain C9I78_08375 PF00990 Diguanylate cyclase, GGDEF domain C9I78_08385 PF00012 Hsp70 protein C9I78_08390 PF00012 Hsp70 protein C9I78_08420 PF00664 ABC transporter transmembrane region C9I78_08420 PF00005 ABC transporter C9I78_08425 PF00005 ABC transporter C9I78_08425 PF00664 ABC transporter transmembrane region C9I78_08450 PF03222 Tryptophan/tyrosine permease family C9I78_08455 PF00465 Iron-containing alcohol dehydrogenase C9I78_08465 PF01966 HD domain C9I78_08560 PF01037 Lrp/AsnC ligand binding domain C9I78_08595 PF00069 Protein kinase domain C9I78_08620 PF04717 Type VI secretion system, phage-baseplate injector C9I78_08625 PF05638 Type VI secretion system effector, Hcp C9I78_08630 PF17871 AAA lid domain C9I78_08630 PF10431 C-terminal, D2-small domain, of ClpB protein C9I78_08630 PF00004 ATPase family associated with various cellular activities (AAA) C9I78_08630 PF07724 AAA domain (Cdc48 subfamily) C9I78_08635 PF02954 Bacterial regulatory protein, Fis family C9I78_08635 PF00072 Response regulator receiver domain C9I78_08635 PF00158 Sigma-54 interaction domain C9I78_08640 PF00691 OmpA family C9I78_08660 PF08525 Opacity-associated protein A N-terminal motif C9I78_08660 PF01551 Peptidase family M23 C9I78_08660 PF01476 LysM domain C9I78_08670 PF03741 Integral membrane protein TerC family C9I78_08680 PF04055 Radical SAM superfamily C9I78_08685 PF11230 Protein of unknown function (DUF3029) C9I78_08690 PF01810 LysE type translocator C9I78_08695 PF11871 Domain of unknown function (DUF3391) C9I78_08695 PF01966 HD domain C9I78_08700 PF03707 Bacterial signalling protein N terminal repeat C9I78_08700 PF00563 EAL domain C9I78_08700 PF00990 Diguanylate cyclase, GGDEF domain C9I78_08705 PF00158 Sigma-54 interaction domain C9I78_08705 PF00072 Response regulator receiver domain C9I78_08705 PF02954 Bacterial regulatory protein, Fis family C9I78_08710 PF00497 Bacterial extracellular solute-binding proteins, family 3 C9I78_08710 PF00512 His Kinase A (phospho-acceptor) domain C9I78_08710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_08715 PF00939 Sodium:sulfate symporter transmembrane region C9I78_08730 PF00300 Histidine phosphatase superfamily (branch 1) C9I78_08750 PF01546 Peptidase family M20/M25/M40 C9I78_08750 PF07687 Peptidase dimerisation domain C9I78_08755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_08755 PF03466 LysR substrate binding domain C9I78_08770 PF08543 Phosphomethylpyrimidine kinase C9I78_08775 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain C9I78_08775 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain C9I78_08775 PF01276 Orn/Lys/Arg decarboxylase, major domain C9I78_08780 PF01276 Orn/Lys/Arg decarboxylase, major domain C9I78_08780 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain C9I78_08780 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain C9I78_08785 PF13520 Amino acid permease C9I78_08795 PF13520 Amino acid permease C9I78_08810 PF13533 Biotin-lipoyl like C9I78_08825 PF12794 Mechanosensitive ion channel inner membrane domain 1 C9I78_08825 PF00924 Mechanosensitive ion channel C9I78_08825 PF12795 Mechanosensitive ion channel porin domain C9I78_08840 PF00005 ABC transporter C9I78_08845 PF02405 Permease MlaE C9I78_08885 PF14497 Glutathione S-transferase, C-terminal domain C9I78_08885 PF02798 Glutathione S-transferase, N-terminal domain C9I78_08895 PF04209 homogentisate 1,2-dioxygenase C9I78_08900 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C9I78_08910 PF01546 Peptidase family M20/M25/M40 C9I78_08910 PF07687 Peptidase dimerisation domain C9I78_08915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C9I78_08920 PF00528 Binding-protein-dependent transport system inner membrane component C9I78_08925 PF00528 Binding-protein-dependent transport system inner membrane component C9I78_08925 PF12911 N-terminal TM domain of oligopeptide transport permease C C9I78_08930 PF00005 ABC transporter C9I78_08930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C9I78_08935 PF00005 ABC transporter C9I78_08935 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C9I78_08950 PF08453 Peptidase family M9 N-terminal C9I78_08950 PF01752 Collagenase C9I78_08965 PF00528 Binding-protein-dependent transport system inner membrane component C9I78_08970 PF00528 Binding-protein-dependent transport system inner membrane component C9I78_08975 PF00005 ABC transporter C9I78_08975 PF08402 TOBE domain C9I78_08980 PF00701 Dihydrodipicolinate synthetase family C9I78_08985 PF02423 Ornithine cyclodeaminase/mu-crystallin family C9I78_09005 PF05544 Proline racemase C9I78_09010 PF00171 Aldehyde dehydrogenase family C9I78_09015 PF00392 Bacterial regulatory proteins, gntR family C9I78_09035 PF05971 RNA methyltransferase C9I78_09040 PF01863 Protein of unknown function DUF45 C9I78_09045 PF04991 LicD family C9I78_09050 PF16363 GDP-mannose 4,6 dehydratase C9I78_09055 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase C9I78_09075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_09075 PF03466 LysR substrate binding domain C9I78_09095 PF00005 ABC transporter C9I78_09100 PF01032 FecCD transport family C9I78_09105 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family C9I78_09120 PF00300 Histidine phosphatase superfamily (branch 1) C9I78_09125 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase C9I78_09130 PF02654 Cobalamin-5-phosphate synthase C9I78_09135 PF02277 Phosphoribosyltransferase C9I78_09140 PF13460 NAD(P)H-binding C9I78_09150 PF00929 Exonuclease C9I78_09150 PF08411 Exonuclease C-terminal C9I78_09155 PF03788 LrgA family C9I78_09160 PF04172 LrgB-like family C9I78_09165 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C9I78_09165 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region C9I78_09170 PF02222 ATP-grasp domain C9I78_09175 PF05724 Thiopurine S-methyltransferase (TPMT) C9I78_09185 PF00216 Bacterial DNA-binding protein C9I78_09200 PF01588 Putative tRNA binding domain C9I78_09200 PF03484 tRNA synthetase B5 domain C9I78_09200 PF03483 B3/4 domain C9I78_09200 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain C9I78_09200 PF03147 Ferredoxin-fold anticodon binding domain C9I78_09205 PF01409 tRNA synthetases class II core domain (F) C9I78_09205 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain C9I78_09210 PF00990 Diguanylate cyclase, GGDEF domain C9I78_09210 PF17158 Membrane-associated sensor, integral membrane domain C9I78_09240 PF01906 Putative heavy-metal-binding C9I78_09245 PF00453 Ribosomal protein L20 C9I78_09250 PF01632 Ribosomal protein L35 C9I78_09255 PF00707 Translation initiation factor IF-3, C-terminal domain C9I78_09255 PF05198 Translation initiation factor IF-3, N-terminal domain C9I78_09260 PF02824 TGS domain C9I78_09260 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C9I78_09260 PF03129 Anticodon binding domain C9I78_09260 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C9I78_09275 PF00392 Bacterial regulatory proteins, gntR family C9I78_09275 PF07702 UTRA domain C9I78_09280 PF01979 Amidohydrolase family C9I78_09285 PF00491 Arginase family C9I78_09290 PF17391 Urocanase N-terminal domain C9I78_09290 PF01175 Urocanase Rossmann-like domain C9I78_09290 PF17392 Urocanase C-terminal domain C9I78_09295 PF00221 Aromatic amino acid lyase C9I78_09305 PF04191 Phospholipid methyltransferase C9I78_09310 PF02913 FAD linked oxidases, C-terminal domain C9I78_09310 PF01565 FAD binding domain C9I78_09310 PF13183 4Fe-4S dicluster domain C9I78_09325 PF00691 OmpA family C9I78_09325 PF05736 OprF membrane domain C9I78_09345 PF01259 SAICAR synthetase C9I78_09350 PF16655 PhoD-like phosphatase, N-terminal domain C9I78_09350 PF09423 PhoD-like phosphatase C9I78_09360 PF02253 Phospholipase A1 C9I78_09365 PF08482 ATP-dependent helicase C-terminal C9I78_09365 PF00271 Helicase conserved C-terminal domain C9I78_09365 PF00270 DEAD/DEAH box helicase C9I78_09365 PF04408 Helicase associated domain (HA2) C9I78_09370 PF03949 Malic enzyme, NAD binding domain C9I78_09370 PF00390 Malic enzyme, N-terminal domain C9I78_09375 PF02698 DUF218 domain C9I78_09380 PF00939 Sodium:sulfate symporter transmembrane region C9I78_09385 PF00990 Diguanylate cyclase, GGDEF domain C9I78_09385 PF00072 Response regulator receiver domain C9I78_09395 PF00266 Aminotransferase class-V C9I78_09405 PF07992 Pyridine nucleotide-disulphide oxidoreductase C9I78_09410 PF00664 ABC transporter transmembrane region C9I78_09410 PF00005 ABC transporter C9I78_09415 PF00664 ABC transporter transmembrane region C9I78_09415 PF00005 ABC transporter C9I78_09420 PF00291 Pyridoxal-phosphate dependent enzyme C9I78_09425 PF00266 Aminotransferase class-V C9I78_09435 PF00512 His Kinase A (phospho-acceptor) domain C9I78_09435 PF00497 Bacterial extracellular solute-binding proteins, family 3 C9I78_09435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_09450 PF04994 TfoX C-terminal domain C9I78_09450 PF04993 TfoX N-terminal domain C9I78_09470 PF03956 Lysine exporter LysO C9I78_09480 PF00282 Pyridoxal-dependent decarboxylase conserved domain C9I78_09485 PF01418 Helix-turn-helix domain, rpiR family C9I78_09485 PF01380 SIS domain C9I78_09490 PF00465 Iron-containing alcohol dehydrogenase C9I78_09500 PF00462 Glutaredoxin C9I78_09505 PF02080 TrkA-C domain C9I78_09505 PF06826 Predicted Permease Membrane Region C9I78_09510 PF12241 Trans-2-enoyl-CoA reductase catalytic region C9I78_09510 PF07055 Enoyl reductase FAD binding domain C9I78_09510 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase C9I78_09515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C9I78_09515 PF02770 Acyl-CoA dehydrogenase, middle domain C9I78_09515 PF09317 Domain of unknown function (DUF1974) C9I78_09515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C9I78_09520 PF00440 Bacterial regulatory proteins, tetR family C9I78_09520 PF16295 Tetracyclin repressor-like, C-terminal domain C9I78_09525 PF06965 Na+/H+ antiporter 1 C9I78_09540 PF00005 ABC transporter C9I78_09545 PF01554 MatE C9I78_09550 PF11066 Protein of unknown function (DUF2867) C9I78_09550 PF13460 NAD(P)H-binding C9I78_09555 PF03264 NapC/NirT cytochrome c family, N-terminal region C9I78_09570 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) C9I78_09585 PF07690 Major Facilitator Superfamily C9I78_09590 PF00849 RNA pseudouridylate synthase C9I78_09590 PF01479 S4 domain C9I78_09595 PF04851 Type III restriction enzyme, res subunit C9I78_09595 PF00271 Helicase conserved C-terminal domain C9I78_09605 PF00486 Transcriptional regulatory protein, C terminal C9I78_09605 PF00072 Response regulator receiver domain C9I78_09610 PF00672 HAMP domain C9I78_09610 PF00512 His Kinase A (phospho-acceptor) domain C9I78_09610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_09615 PF01386 Ribosomal L25p family C9I78_09630 PF02872 5'-nucleotidase, C-terminal domain C9I78_09630 PF00149 Calcineurin-like phosphoesterase C9I78_09645 PF06945 Protein of unknown function (DUF1289) C9I78_09655 PF00072 Response regulator receiver domain C9I78_09655 PF00196 Bacterial regulatory proteins, luxR family C9I78_09660 PF00512 His Kinase A (phospho-acceptor) domain C9I78_09660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_09670 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C9I78_09670 PF07992 Pyridine nucleotide-disulphide oxidoreductase C9I78_09680 PF09335 SNARE associated Golgi protein C9I78_09685 PF13416 Bacterial extracellular solute-binding protein C9I78_09690 PF00528 Binding-protein-dependent transport system inner membrane component C9I78_09695 PF00005 ABC transporter C9I78_09700 PF01066 CDP-alcohol phosphatidyltransferase C9I78_09715 PF00158 Sigma-54 interaction domain C9I78_09715 PF01590 GAF domain C9I78_09720 PF03063 Prismane/CO dehydrogenase family C9I78_09725 PF00175 Oxidoreductase NAD-binding domain C9I78_09725 PF00111 2Fe-2S iron-sulfur cluster binding domain C9I78_09725 PF00970 Oxidoreductase FAD-binding domain C9I78_09735 PF00849 RNA pseudouridylate synthase C9I78_09740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C9I78_09740 PF00672 HAMP domain C9I78_09740 PF12729 Four helix bundle sensory module for signal transduction C9I78_09745 PF00209 Sodium:neurotransmitter symporter family C9I78_09750 PF13091 PLD-like domain C9I78_09750 PF13396 Phospholipase_D-nuclease N-terminal C9I78_09755 PF01053 Cys/Met metabolism PLP-dependent enzyme C9I78_09760 PF00561 alpha/beta hydrolase fold C9I78_09765 PF03280 Proteobacterial lipase chaperone protein C9I78_09770 PF03352 Methyladenine glycosylase C9I78_09775 PF00873 AcrB/AcrD/AcrF family C9I78_09780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C9I78_09785 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C9I78_09790 PF04024 PspC domain C9I78_09795 PF06667 Phage shock protein B C9I78_09800 PF04012 PspA/IM30 family C9I78_09805 PF02954 Bacterial regulatory protein, Fis family C9I78_09805 PF00158 Sigma-54 interaction domain C9I78_09810 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C9I78_09815 PF00528 Binding-protein-dependent transport system inner membrane component C9I78_09820 PF00528 Binding-protein-dependent transport system inner membrane component C9I78_09820 PF12911 N-terminal TM domain of oligopeptide transport permease C C9I78_09825 PF00005 ABC transporter C9I78_09825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C9I78_09830 PF00005 ABC transporter C9I78_09840 PF01368 DHH family C9I78_09840 PF02833 DHHA2 domain C9I78_09850 PF16875 Glycosyl hydrolase family 36 N-terminal domain C9I78_09850 PF16874 Glycosyl hydrolase family 36 C-terminal domain C9I78_09855 PF01568 Molydopterin dinucleotide binding domain C9I78_09855 PF18364 Molybdopterin oxidoreductase N-terminal domain C9I78_09855 PF00384 Molybdopterin oxidoreductase C9I78_09860 PF03264 NapC/NirT cytochrome c family, N-terminal region C9I78_09865 PF06796 Periplasmic nitrate reductase protein NapE C9I78_09870 PF03649 Uncharacterised protein family (UPF0014) C9I78_09880 PF01226 Formate/nitrite transporter C9I78_09905 PF02698 DUF218 domain C9I78_09910 PF00265 Thymidine kinase C9I78_09915 PF01406 tRNA synthetases class I (C) catalytic domain C9I78_09915 PF09190 DALR domain C9I78_09920 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C9I78_09925 PF00149 Calcineurin-like phosphoesterase C9I78_09930 PF00563 EAL domain C9I78_09930 PF08668 HDOD domain C9I78_09940 PF02810 SEC-C motif C9I78_09945 PF01502 Phosphoribosyl-AMP cyclohydrolase C9I78_09945 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase C9I78_09950 PF00977 Histidine biosynthesis protein C9I78_09955 PF00977 Histidine biosynthesis protein C9I78_09960 PF00117 Glutamine amidotransferase class-I C9I78_09965 PF00475 Imidazoleglycerol-phosphate dehydratase C9I78_09965 PF08645 Polynucleotide kinase 3 phosphatase C9I78_09970 PF00155 Aminotransferase class I and II C9I78_09975 PF00815 Histidinol dehydrogenase C9I78_09980 PF08029 HisG, C-terminal domain C9I78_09980 PF01634 ATP phosphoribosyltransferase C9I78_09985 PF00158 Sigma-54 interaction domain C9I78_09985 PF02954 Bacterial regulatory protein, Fis family C9I78_09985 PF00072 Response regulator receiver domain C9I78_09995 PF03553 Na+/H+ antiporter family C9I78_10000 PF00816 H-NS histone family C9I78_10005 PF00294 pfkB family carbohydrate kinase C9I78_10020 PF04356 Protein of unknown function (DUF489) C9I78_10025 PF08328 Adenylosuccinate lyase C-terminal C9I78_10025 PF00206 Lyase C9I78_10065 PF00106 short chain dehydrogenase C9I78_10075 PF01435 Peptidase family M48 C9I78_10090 PF08241 Methyltransferase domain C9I78_10095 PF00155 Aminotransferase class I and II C9I78_10100 PF06968 Biotin and Thiamin Synthesis associated domain C9I78_10100 PF04055 Radical SAM superfamily C9I78_10105 PF00202 Aminotransferase class-III C9I78_10110 PF01258 Prokaryotic dksA/traR C4-type zinc finger C9I78_10125 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C9I78_10125 PF02403 Seryl-tRNA synthetase N-terminal domain C9I78_10130 PF12002 MgsA AAA+ ATPase C terminal C9I78_10130 PF16193 AAA C-terminal domain C9I78_10130 PF00004 ATPase family associated with various cellular activities (AAA) C9I78_10135 PF03548 Outer membrane lipoprotein carrier protein LolA C9I78_10140 PF01580 FtsK/SpoIIIE family C9I78_10140 PF09397 Ftsk gamma domain C9I78_10140 PF13491 4TM region of DNA translocase FtsK/SpoIIIE C9I78_10140 PF17854 FtsK alpha domain C9I78_10145 PF01037 Lrp/AsnC ligand binding domain C9I78_10150 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C9I78_10150 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C9I78_10160 PF03466 LysR substrate binding domain C9I78_10160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_10170 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) C9I78_10175 PF03372 Endonuclease/Exonuclease/phosphatase family C9I78_10185 PF00579 tRNA synthetases class I (W and Y) C9I78_10205 PF00873 AcrB/AcrD/AcrF family C9I78_10210 PF00529 HlyD membrane-fusion protein of T1SS C9I78_10210 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C9I78_10225 PF00672 HAMP domain C9I78_10225 PF02743 Cache domain C9I78_10225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C9I78_10235 PF02796 Helix-turn-helix domain of resolvase C9I78_10235 PF00239 Resolvase, N terminal domain C9I78_10275 PF06610 L-alanine exporter C9I78_10280 PF00072 Response regulator receiver domain C9I78_10280 PF09308 LuxQ, periplasmic C9I78_10280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_10280 PF00512 His Kinase A (phospho-acceptor) domain C9I78_10290 PF03738 Glutathionylspermidine synthase preATP-grasp C9I78_10300 PF03994 Domain of Unknown Function (DUF350) C9I78_10310 PF02445 Quinolinate synthetase A protein C9I78_10315 PF13174 Tetratricopeptide repeat C9I78_10315 PF16331 TolA binding protein trimerisation C9I78_10320 PF00691 OmpA family C9I78_10325 PF04052 TolB amino-terminal domain C9I78_10325 PF07676 WD40-like Beta Propeller Repeat C9I78_10335 PF02472 Biopolymer transport protein ExbD/TolR C9I78_10340 PF01618 MotA/TolQ/ExbB proton channel family C9I78_10345 PF03061 Thioesterase superfamily C9I78_10355 PF08173 Membrane bound YbgT-like protein C9I78_10360 PF02322 Cytochrome bd terminal oxidase subunit II C9I78_10365 PF01654 Cytochrome bd terminal oxidase subunit I C9I78_10370 PF05496 Holliday junction DNA helicase RuvB P-loop domain C9I78_10370 PF05491 RuvB C-terminal winged helix domain C9I78_10370 PF17864 RuvB AAA lid domain C9I78_10375 PF01330 RuvA N terminal domain C9I78_10375 PF07499 RuvA, C-terminal domain C9I78_10380 PF02203 Tar ligand binding domain homologue C9I78_10380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C9I78_10380 PF00672 HAMP domain C9I78_10385 PF02075 Crossover junction endodeoxyribonuclease RuvC C9I78_10390 PF01336 OB-fold nucleic acid binding domain C9I78_10390 PF00152 tRNA synthetases class II (D, K and N) C9I78_10390 PF02938 GAD domain C9I78_10395 PF01904 Protein of unknown function DUF72 C9I78_10400 PF13649 Methyltransferase domain C9I78_10405 PF08003 Protein of unknown function (DUF1698) C9I78_10415 PF08443 RimK-like ATP-grasp domain C9I78_10415 PF18030 RimK PreATP-grasp domain C9I78_10425 PF18030 RimK PreATP-grasp domain C9I78_10425 PF08443 RimK-like ATP-grasp domain C9I78_10435 PF16330 MukB hinge domain C9I78_10435 PF04310 MukB N-terminal C9I78_10440 PF04288 MukE-like family C9I78_10445 PF17193 MukF C-terminal domain C9I78_10445 PF17192 MukF middle domain C9I78_10445 PF03882 MukF winged-helix domain C9I78_10455 PF02698 DUF218 domain C9I78_10460 PF00486 Transcriptional regulatory protein, C terminal C9I78_10460 PF00072 Response regulator receiver domain C9I78_10465 PF02613 Nitrate reductase delta subunit C9I78_10470 PF00356 Bacterial regulatory proteins, lacI family C9I78_10475 PF04993 TfoX N-terminal domain C9I78_10475 PF04994 TfoX C-terminal domain C9I78_10495 PF08323 Starch synthase catalytic domain C9I78_10495 PF00534 Glycosyl transferases group 1 C9I78_10500 PF00483 Nucleotidyl transferase C9I78_10510 PF10692 Protein of unknown function (DUF2498) C9I78_10515 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C9I78_10525 PF03588 Leucyl/phenylalanyl-tRNA protein transferase C9I78_10530 PF04377 Arginine-tRNA-protein transferase, C terminus C9I78_10530 PF04376 Arginine-tRNA-protein transferase, N terminus C9I78_10535 PF01176 Translation initiation factor 1A / IF-1 C9I78_10545 PF17871 AAA lid domain C9I78_10545 PF00004 ATPase family associated with various cellular activities (AAA) C9I78_10545 PF02861 Clp amino terminal domain, pathogenicity island component C9I78_10545 PF10431 C-terminal, D2-small domain, of ClpB protein C9I78_10545 PF07724 AAA domain (Cdc48 subfamily) C9I78_10550 PF02617 ATP-dependent Clp protease adaptor protein ClpS C9I78_10555 PF00313 'Cold-shock' DNA-binding domain C9I78_10560 PF03971 Monomeric isocitrate dehydrogenase C9I78_10565 PF00849 RNA pseudouridylate synthase C9I78_10570 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) C9I78_10580 PF13307 Helicase C-terminal domain C9I78_10580 PF06733 DEAD_2 C9I78_10585 PF01925 Sulfite exporter TauE/SafE C9I78_10590 PF07445 Primosomal replication protein priC C9I78_10595 PF10689 Protein of unknown function (DUF2496) C9I78_10600 PF03372 Endonuclease/Exonuclease/phosphatase family C9I78_10610 PF00528 Binding-protein-dependent transport system inner membrane component C9I78_10615 PF00528 Binding-protein-dependent transport system inner membrane component C9I78_10620 PF00497 Bacterial extracellular solute-binding proteins, family 3 C9I78_10625 PF00005 ABC transporter C9I78_10645 PF02901 Pyruvate formate lyase-like C9I78_10645 PF01228 Glycine radical C9I78_10655 PF04055 Radical SAM superfamily C9I78_10665 PF03887 YfbU domain C9I78_10675 PF08298 PrkA AAA domain C9I78_10675 PF06798 PrkA serine protein kinase C-terminal domain C9I78_10680 PF04285 Protein of unknown function (DUF444) C9I78_10685 PF04293 SpoVR like protein C9I78_10690 PF02348 Cytidylyltransferase C9I78_10695 PF03966 Trm112p-like protein C9I78_10700 PF02606 Tetraacyldisaccharide-1-P 4'-kinase C9I78_10705 PF00005 ABC transporter C9I78_10705 PF00664 ABC transporter transmembrane region C9I78_10710 PF00753 Metallo-beta-lactamase superfamily C9I78_10710 PF03772 Competence protein C9I78_10710 PF13567 Domain of unknown function (DUF4131) C9I78_10720 PF12704 MacB-like periplasmic core domain C9I78_10720 PF02687 FtsX-like permease family C9I78_10725 PF00005 ABC transporter C9I78_10730 PF12704 MacB-like periplasmic core domain C9I78_10730 PF02687 FtsX-like permease family C9I78_10740 PF02559 CarD-like/TRCF domain C9I78_10740 PF17757 UvrB interaction domain C9I78_10740 PF03461 TRCF domain C9I78_10740 PF00270 DEAD/DEAH box helicase C9I78_10740 PF00271 Helicase conserved C-terminal domain C9I78_10755 PF07992 Pyridine nucleotide-disulphide oxidoreductase C9I78_10765 PF05728 Uncharacterised protein family (UPF0227) C9I78_10775 PF13036 Peptidoglycan-synthase activator LpoB C9I78_10775 PF08139 Prokaryotic membrane lipoprotein lipid attachment site C9I78_10790 PF01230 HIT domain C9I78_10795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C9I78_10795 PF00672 HAMP domain C9I78_10810 PF01048 Phosphorylase superfamily C9I78_10815 PF00403 Heavy-metal-associated domain C9I78_10820 PF00478 IMP dehydrogenase / GMP reductase domain C9I78_10820 PF00571 CBS domain C9I78_10835 PF00037 4Fe-4S binding domain C9I78_10835 PF11953 Domain of unknown function (DUF3470) C9I78_10840 PF08032 RNA 2'-O ribose methyltransferase substrate binding C9I78_10840 PF00588 SpoU rRNA Methylase family C9I78_10850 PF00990 Diguanylate cyclase, GGDEF domain C9I78_10850 PF17152 Periplasmic sensor domain C9I78_10860 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C9I78_10865 PF09619 Type III secretion system lipoprotein chaperone (YscW) C9I78_10880 PF13404 AsnC-type helix-turn-helix domain C9I78_10880 PF01037 Lrp/AsnC ligand binding domain C9I78_10885 PF00291 Pyridoxal-phosphate dependent enzyme C9I78_10910 PF00873 AcrB/AcrD/AcrF family C9I78_10915 PF13533 Biotin-lipoyl like C9I78_10960 PF07690 Major Facilitator Superfamily C9I78_10965 PF03601 Conserved hypothetical protein 698 C9I78_10975 PF13193 AMP-binding enzyme C-terminal domain C9I78_10975 PF00501 AMP-binding enzyme C9I78_10980 PF13378 Enolase C-terminal domain-like C9I78_10985 PF00378 Enoyl-CoA hydratase/isomerase C9I78_10990 PF12697 Alpha/beta hydrolase family C9I78_10995 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C9I78_10995 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C9I78_10995 PF16582 Middle domain of thiamine pyrophosphate C9I78_11000 PF00425 chorismate binding enzyme C9I78_11005 PF00155 Aminotransferase class I and II C9I78_11015 PF01966 HD domain C9I78_11015 PF13286 Phosphohydrolase-associated domain C9I78_11035 PF13145 PPIC-type PPIASE domain C9I78_11040 PF00216 Bacterial DNA-binding protein C9I78_11045 PF00004 ATPase family associated with various cellular activities (AAA) C9I78_11045 PF05362 Lon protease (S16) C-terminal proteolytic domain C9I78_11045 PF02190 ATP-dependent protease La (LON) substrate-binding domain C9I78_11050 PF06689 ClpX C4-type zinc finger C9I78_11050 PF10431 C-terminal, D2-small domain, of ClpB protein C9I78_11050 PF07724 AAA domain (Cdc48 subfamily) C9I78_11055 PF00574 Clp protease C9I78_11060 PF05698 Bacterial trigger factor protein (TF) C-terminus C9I78_11060 PF05697 Bacterial trigger factor protein (TF) C9I78_11060 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C9I78_11065 PF02743 Cache domain C9I78_11065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_11065 PF00512 His Kinase A (phospho-acceptor) domain C9I78_11080 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component C9I78_11085 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component C9I78_11090 PF03480 Bacterial extracellular solute-binding protein, family 7 C9I78_11095 PF02696 Uncharacterized ACR, YdiU/UPF0061 family C9I78_11115 PF02386 Cation transport protein C9I78_11120 PF02254 TrkA-N domain C9I78_11120 PF02080 TrkA-C domain C9I78_11125 PF00271 Helicase conserved C-terminal domain C9I78_11125 PF00270 DEAD/DEAH box helicase C9I78_11130 PF01595 Cyclin M transmembrane N-terminal domain C9I78_11130 PF00571 CBS domain C9I78_11130 PF03471 Transporter associated domain C9I78_11140 PF04820 Tryptophan halogenase C9I78_11165 PF00550 Phosphopantetheine attachment site C9I78_11170 PF00550 Phosphopantetheine attachment site C9I78_11190 PF00535 Glycosyl transferase family 2 C9I78_11195 PF00221 Aromatic amino acid lyase C9I78_11220 PF00109 Beta-ketoacyl synthase, N-terminal domain C9I78_11220 PF02801 Beta-ketoacyl synthase, C-terminal domain C9I78_11225 PF07977 FabA-like domain C9I78_11235 PF02801 Beta-ketoacyl synthase, C-terminal domain C9I78_11235 PF00109 Beta-ketoacyl synthase, N-terminal domain C9I78_11250 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain C9I78_11250 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain C9I78_11255 PF07670 Nucleoside recognition C9I78_11255 PF01773 Na+ dependent nucleoside transporter N-terminus C9I78_11255 PF07662 Na+ dependent nucleoside transporter C-terminus C9I78_11260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_11260 PF03466 LysR substrate binding domain C9I78_11265 PF13406 Transglycosylase SLT domain C9I78_11270 PF05166 YcgL domain C9I78_11275 PF05209 Septum formation inhibitor MinC, N-terminal domain C9I78_11275 PF03775 Septum formation inhibitor MinC, C-terminal domain C9I78_11280 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C9I78_11285 PF03776 Septum formation topological specificity factor MinE C9I78_11290 PF01612 3'-5' exonuclease C9I78_11290 PF00570 HRDC domain C9I78_11295 PF00501 AMP-binding enzyme C9I78_11295 PF13193 AMP-binding enzyme C-terminal domain C9I78_11300 PF00561 alpha/beta hydrolase fold C9I78_11315 PF00814 Glycoprotease family C9I78_11320 PF13307 Helicase C-terminal domain C9I78_11320 PF04851 Type III restriction enzyme, res subunit C9I78_11325 PF00551 Formyl transferase C9I78_11325 PF01842 ACT domain C9I78_11330 PF06185 YecM protein C9I78_11340 PF00750 tRNA synthetases class I (R) C9I78_11340 PF05746 DALR anticodon binding domain C9I78_11340 PF03485 Arginyl tRNA synthetase N terminal domain C9I78_11355 PF07670 Nucleoside recognition C9I78_11355 PF02421 Ferrous iron transport protein B C9I78_11355 PF07664 Ferrous iron transport protein B C terminus C9I78_11355 PF17910 FeoB cytosolic helical domain C9I78_11360 PF04023 FeoA domain C9I78_11375 PF12833 Helix-turn-helix domain C9I78_11375 PF02311 AraC-like ligand binding domain C9I78_11380 PF01297 Zinc-uptake complex component A periplasmic C9I78_11385 PF00005 ABC transporter C9I78_11390 PF00950 ABC 3 transport family C9I78_11395 PF00549 CoA-ligase C9I78_11395 PF02629 CoA binding domain C9I78_11400 PF08442 ATP-grasp domain C9I78_11400 PF00549 CoA-ligase C9I78_11405 PF00364 Biotin-requiring enzyme C9I78_11405 PF02817 e3 binding domain C9I78_11405 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C9I78_11410 PF16078 2-oxoglutarate dehydrogenase N-terminus C9I78_11410 PF02779 Transketolase, pyrimidine binding domain C9I78_11410 PF00676 Dehydrogenase E1 component C9I78_11410 PF16870 2-oxoglutarate dehydrogenase C-terminal C9I78_11415 PF13085 2Fe-2S iron-sulfur cluster binding domain C9I78_11420 PF02910 Fumarate reductase flavoprotein C-term C9I78_11420 PF00890 FAD binding domain C9I78_11425 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C9I78_11430 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C9I78_11435 PF00285 Citrate synthase, C-terminal domain C9I78_11440 PF01784 NIF3 (NGG1p interacting factor 3) C9I78_11450 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C9I78_11450 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C9I78_11450 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C9I78_11450 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C9I78_11455 PF03925 SeqA protein C-terminal domain C9I78_11455 PF17206 SeqA protein N-terminal domain C9I78_11460 PF12697 Alpha/beta hydrolase family C9I78_11470 PF00258 Flavodoxin C9I78_11475 PF01118 Semialdehyde dehydrogenase, NAD binding domain C9I78_11475 PF02774 Semialdehyde dehydrogenase, dimerisation domain C9I78_11480 PF01475 Ferric uptake regulator family C9I78_11485 PF00749 tRNA synthetases class I (E and Q), catalytic domain C9I78_11485 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain C9I78_11490 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C9I78_11490 PF00367 phosphotransferase system, EIIB C9I78_11490 PF02378 Phosphotransferase system, EIIC C9I78_11500 PF01979 Amidohydrolase family C9I78_11505 PF01047 MarR family C9I78_11505 PF00480 ROK family C9I78_11510 PF02254 TrkA-N domain C9I78_11510 PF00999 Sodium/hydrogen exchanger family C9I78_11515 PF00733 Asparagine synthase C9I78_11515 PF13537 Glutamine amidotransferase domain C9I78_11520 PF02357 Transcription termination factor nusG C9I78_11525 PF00854 POT family C9I78_11530 PF00762 Ferrochelatase C9I78_11535 PF05191 Adenylate kinase, active site lid C9I78_11540 PF00183 Hsp90 protein C9I78_11540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_11545 PF00486 Transcriptional regulatory protein, C terminal C9I78_11550 PF17323 Trans-membrane regulatory protein ToxS C9I78_11565 PF12850 Calcineurin-like phosphoesterase superfamily domain C9I78_11585 PF07556 Protein of unknown function (DUF1538) C9I78_11590 PF07556 Protein of unknown function (DUF1538) C9I78_11595 PF08338 Domain of unknown function (DUF1731) C9I78_11595 PF01370 NAD dependent epimerase/dehydratase family C9I78_11600 PF00106 short chain dehydrogenase C9I78_11610 PF00085 Thioredoxin C9I78_11615 PF01145 SPFH domain / Band 7 family C9I78_11615 PF16200 C-terminal region of band_7 C9I78_11630 PF03573 outer membrane porin, OprD family C9I78_11645 PF12826 Helix-hairpin-helix motif C9I78_11645 PF00533 BRCA1 C Terminus (BRCT) domain C9I78_11645 PF03120 NAD-dependent DNA ligase OB-fold domain C9I78_11645 PF03119 NAD-dependent DNA ligase C4 zinc finger domain C9I78_11645 PF01653 NAD-dependent DNA ligase adenylation domain C9I78_11650 PF04354 ZipA, C-terminal FtsZ-binding domain C9I78_11660 PF00291 Pyridoxal-phosphate dependent enzyme C9I78_11670 PF00381 PTS HPr component phosphorylation site C9I78_11675 PF02896 PEP-utilising enzyme, TIM barrel domain C9I78_11675 PF00391 PEP-utilising enzyme, mobile domain C9I78_11675 PF05524 PEP-utilising enzyme, N-terminal C9I78_11680 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C9I78_11690 PF00700 Bacterial flagellin C-terminal helical region C9I78_11690 PF07196 Flagellin hook IN motif C9I78_11690 PF00669 Bacterial flagellin N-terminal helical region C9I78_11695 PF07196 Flagellin hook IN motif C9I78_11695 PF00700 Bacterial flagellin C-terminal helical region C9I78_11695 PF00669 Bacterial flagellin N-terminal helical region C9I78_11705 PF00700 Bacterial flagellin C-terminal helical region C9I78_11705 PF07196 Flagellin hook IN motif C9I78_11705 PF00669 Bacterial flagellin N-terminal helical region C9I78_11715 PF00669 Bacterial flagellin N-terminal helical region C9I78_11720 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C9I78_11720 PF07196 Flagellin hook IN motif C9I78_11725 PF10135 Rod binding protein C9I78_11725 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase C9I78_11730 PF02119 Flagellar P-ring protein C9I78_11735 PF02107 Flagellar L-ring protein C9I78_11740 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C9I78_11740 PF00460 Flagella basal body rod protein C9I78_11745 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C9I78_11745 PF00460 Flagella basal body rod protein C9I78_11755 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C9I78_11755 PF00460 Flagella basal body rod protein C9I78_11755 PF07559 Flagellar basal body protein FlaE C9I78_11760 PF13860 FlgD Ig-like domain C9I78_11760 PF03963 Flagellar hook capping protein - N-terminal region C9I78_11760 PF13861 FlgD Tudor-like domain C9I78_11765 PF00460 Flagella basal body rod protein C9I78_11765 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C9I78_11770 PF00460 Flagella basal body rod protein C9I78_11775 PF01739 CheR methyltransferase, SAM binding domain C9I78_11775 PF03705 CheR methyltransferase, all-alpha domain C9I78_11780 PF01584 CheW-like domain C9I78_11780 PF00072 Response regulator receiver domain C9I78_11830 PF00691 OmpA family C9I78_11830 PF01389 OmpA-like transmembrane domain C9I78_11840 PF00749 tRNA synthetases class I (E and Q), catalytic domain C9I78_11845 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) C9I78_11850 PF13609 Gram-negative porin C9I78_11860 PF00403 Heavy-metal-associated domain C9I78_11875 PF03173 Putative carbohydrate binding domain C9I78_11875 PF02838 Glycosyl hydrolase family 20, domain 2 C9I78_11875 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain C9I78_11875 PF00728 Glycosyl hydrolase family 20, catalytic domain C9I78_11900 PF01713 Smr domain C9I78_11905 PF00849 RNA pseudouridylate synthase C9I78_11905 PF01479 S4 domain C9I78_11910 PF04073 Aminoacyl-tRNA editing domain C9I78_11915 PF02872 5'-nucleotidase, C-terminal domain C9I78_11915 PF00149 Calcineurin-like phosphoesterase C9I78_11920 PF00793 DAHP synthetase I family C9I78_11925 PF13369 Transglutaminase-like superfamily C9I78_11930 PF04247 Invasion gene expression up-regulator, SirB C9I78_11935 PF13847 Methyltransferase domain C9I78_11935 PF17827 PrmC N-terminal domain C9I78_11940 PF00472 RF-1 domain C9I78_11940 PF03462 PCRF domain C9I78_11945 PF01488 Shikimate / quinate 5-dehydrogenase C9I78_11945 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain C9I78_11945 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain C9I78_11950 PF03550 Outer membrane lipoprotein LolB C9I78_11955 PF00288 GHMP kinases N terminal domain C9I78_11955 PF08544 GHMP kinases C terminal C9I78_11960 PF14572 Phosphoribosyl synthetase-associated domain C9I78_11960 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase C9I78_11965 PF01195 Peptidyl-tRNA hydrolase C9I78_11970 PF06071 Protein of unknown function (DUF933) C9I78_11970 PF01926 50S ribosome-binding GTPase C9I78_12085 PF01494 FAD binding domain C9I78_12095 PF00919 Uncharacterized protein family UPF0004 C9I78_12095 PF04055 Radical SAM superfamily C9I78_12095 PF01938 TRAM domain C9I78_12100 PF02562 PhoH-like protein C9I78_12105 PF02130 Uncharacterized protein family UPF0054 C9I78_12110 PF03471 Transporter associated domain C9I78_12110 PF00571 CBS domain C9I78_12115 PF00795 Carbon-nitrogen hydrolase C9I78_12120 PF07295 Zinc-ribbon containing domain C9I78_12125 PF13603 Leucyl-tRNA synthetase, Domain 2 C9I78_12125 PF00133 tRNA synthetases class I (I, L, M and V) C9I78_12125 PF08264 Anticodon-binding domain of tRNA C9I78_12130 PF04390 Lipopolysaccharide-assembly C9I78_12135 PF06144 DNA polymerase III, delta subunit C9I78_12135 PF14840 Processivity clamp loader gamma complex DNA pol III C-term C9I78_12145 PF02590 Predicted SPOUT methyltransferase C9I78_12150 PF03717 Penicillin-binding Protein dimerisation domain C9I78_12150 PF00905 Penicillin binding protein transpeptidase domain C9I78_12155 PF01098 Cell cycle protein C9I78_12160 PF05036 Sporulation related domain C9I78_12160 PF03330 Lytic transglycolase C9I78_12165 PF07943 Penicillin-binding protein 5, C-terminal domain C9I78_12165 PF00768 D-alanyl-D-alanine carboxypeptidase C9I78_12170 PF04359 Protein of unknown function (DUF493) C9I78_12175 PF03099 Biotin/lipoate A/B protein ligase family C9I78_12180 PF04055 Radical SAM superfamily C9I78_12180 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family C9I78_12185 PF00464 Serine hydroxymethyltransferase C9I78_12190 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) C9I78_12190 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 C9I78_12205 PF00128 Alpha amylase, catalytic domain C9I78_12205 PF16657 Maltogenic Amylase, C-terminal domain C9I78_12210 PF00367 phosphotransferase system, EIIB C9I78_12210 PF02378 Phosphotransferase system, EIIC C9I78_12215 PF00356 Bacterial regulatory proteins, lacI family C9I78_12230 PF00005 ABC transporter C9I78_12230 PF09383 NIL domain C9I78_12235 PF00528 Binding-protein-dependent transport system inner membrane component C9I78_12240 PF03180 NLPA lipoprotein C9I78_12245 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) C9I78_12250 PF07348 Syd protein (SUKH-2) C9I78_12255 PF14489 QueF-like protein C9I78_12255 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term C9I78_12265 PF00072 Response regulator receiver domain C9I78_12265 PF00990 Diguanylate cyclase, GGDEF domain C9I78_12270 PF03641 Possible lysine decarboxylase C9I78_12270 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases C9I78_12270 PF11892 Domain of unknown function (DUF3412) C9I78_12275 PF01367 5'-3' exonuclease, C-terminal SAM fold C9I78_12275 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C9I78_12280 PF01223 DNA/RNA non-specific endonuclease C9I78_12285 PF18125 RlmM ferredoxin-like domain C9I78_12285 PF01728 FtsJ-like methyltransferase C9I78_12290 PF04241 Protein of unknown function (DUF423) C9I78_12300 PF03466 LysR substrate binding domain C9I78_12300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_12305 PF02926 THUMP domain C9I78_12305 PF02568 Thiamine biosynthesis protein (ThiI) C9I78_12310 PF00691 OmpA family C9I78_12315 PF01618 MotA/TolQ/ExbB proton channel family C9I78_12320 PF02609 Exonuclease VII small subunit C9I78_12325 PF00348 Polyprenyl synthetase C9I78_12330 PF13292 1-deoxy-D-xylulose-5-phosphate synthase C9I78_12330 PF02780 Transketolase, C-terminal domain C9I78_12330 PF02779 Transketolase, pyrimidine binding domain C9I78_12335 PF04608 Phosphatidylglycerophosphatase A C9I78_12340 PF00586 AIR synthase related protein, N-terminal domain C9I78_12340 PF02769 AIR synthase related protein, C-terminal domain C9I78_12345 PF01029 NusB family C9I78_12350 PF00885 6,7-dimethyl-8-ribityllumazine synthase C9I78_12355 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C9I78_12355 PF00925 GTP cyclohydrolase II C9I78_12360 PF00677 Lumazine binding domain C9I78_12365 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C9I78_12365 PF01872 RibD C-terminal domain C9I78_12370 PF03477 ATP cone domain C9I78_12375 PF00171 Aldehyde dehydrogenase family C9I78_12380 PF00696 Amino acid kinase family C9I78_12380 PF01472 PUA domain C9I78_12385 PF07417 Sigma factor-binding transcriptional regulator Crl C9I78_12395 PF00156 Phosphoribosyl transferase domain C9I78_12400 PF00860 Permease family C9I78_12405 PF01546 Peptidase family M20/M25/M40 C9I78_12405 PF07687 Peptidase dimerisation domain C9I78_12430 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal C9I78_12430 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain C9I78_12430 PF02769 AIR synthase related protein, C-terminal domain C9I78_12435 PF01464 Transglycosylase SLT domain C9I78_12435 PF00497 Bacterial extracellular solute-binding proteins, family 3 C9I78_12445 PF14437 MafB19-like deaminase C9I78_12450 PF03806 AbgT putative transporter family C9I78_12475 PF07963 Prokaryotic N-terminal methylation motif C9I78_12475 PF00114 Pilin (bacterial filament) C9I78_12480 PF07963 Prokaryotic N-terminal methylation motif C9I78_12480 PF00114 Pilin (bacterial filament) C9I78_12490 PF00684 DnaJ central domain C9I78_12490 PF00226 DnaJ domain C9I78_12490 PF01556 DnaJ C terminal domain C9I78_12495 PF00012 Hsp70 protein C9I78_12500 PF00375 Sodium:dicarboxylate symporter family C9I78_12505 PF01025 GrpE C9I78_12510 PF01513 ATP-NAD kinase C9I78_12520 PF02463 RecF/RecN/SMC N terminal domain C9I78_12525 PF04355 SmpA / OmlA family C9I78_12530 PF03658 RnfH family Ubiquitin C9I78_12535 PF03364 Polyketide cyclase / dehydrase and lipid transport C9I78_12540 PF01668 SmpB protein C9I78_12550 PF13356 Arm DNA-binding domain C9I78_12550 PF00589 Phage integrase family C9I78_12565 PF04851 Type III restriction enzyme, res subunit C9I78_12565 PF00271 Helicase conserved C-terminal domain C9I78_12565 PF08463 EcoEI R protein C-terminal C9I78_12565 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) C9I78_12570 PF01555 DNA methylase C9I78_12605 PF02384 N-6 DNA Methylase C9I78_12605 PF12161 HsdM N-terminal domain C9I78_12610 PF01420 Type I restriction modification DNA specificity domain C9I78_12620 PF13737 Transposase DDE domain C9I78_12630 PF00239 Resolvase, N terminal domain C9I78_12630 PF02796 Helix-turn-helix domain of resolvase C9I78_12650 PF00072 Response regulator receiver domain C9I78_12650 PF00990 Diguanylate cyclase, GGDEF domain C9I78_12700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_12700 PF03466 LysR substrate binding domain C9I78_12705 PF00795 Carbon-nitrogen hydrolase C9I78_12705 PF00583 Acetyltransferase (GNAT) family C9I78_12725 PF00202 Aminotransferase class-III C9I78_12730 PF01053 Cys/Met metabolism PLP-dependent enzyme C9I78_12735 PF07969 Amidohydrolase family C9I78_12755 PF03466 LysR substrate binding domain C9I78_12755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_12760 PF01266 FAD dependent oxidoreductase C9I78_12765 PF01235 Sodium:alanine symporter family C9I78_12775 PF01184 GPR1/FUN34/yaaH family C9I78_12780 PF06483 Chitinase C C9I78_12780 PF00704 Glycosyl hydrolases family 18 C9I78_12785 PF03553 Na+/H+ antiporter family C9I78_12840 PF13737 Transposase DDE domain C9I78_12865 PF13356 Arm DNA-binding domain C9I78_12865 PF00589 Phage integrase family C9I78_12870 PF02540 NAD synthase C9I78_12870 PF00958 GMP synthase C terminal domain C9I78_12870 PF00117 Glutamine amidotransferase class-I C9I78_12875 PF00571 CBS domain C9I78_12875 PF00478 IMP dehydrogenase / GMP reductase domain C9I78_12880 PF13742 OB-fold nucleic acid binding domain C9I78_12880 PF02601 Exonuclease VII, large subunit C9I78_12895 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal C9I78_12895 PF01926 50S ribosome-binding GTPase C9I78_12900 PF13360 PQQ-like domain C9I78_12905 PF09976 Tetratricopeptide repeat-like domain C9I78_12910 PF03129 Anticodon binding domain C9I78_12910 PF13393 Histidyl-tRNA synthetase C9I78_12915 PF04551 GcpE protein C9I78_12920 PF13464 Domain of unknown function (DUF4115) C9I78_12930 PF04055 Radical SAM superfamily C9I78_12935 PF00334 Nucleoside diphosphate kinase C9I78_12940 PF00883 Cytosol aminopeptidase family, catalytic domain C9I78_12940 PF12404 Peptidase C9I78_12945 PF04384 Iron-sulphur cluster assembly C9I78_12950 PF00111 2Fe-2S iron-sulfur cluster binding domain C9I78_12955 PF00012 Hsp70 protein C9I78_12960 PF07743 HSCB C-terminal oligomerisation domain C9I78_12960 PF00226 DnaJ domain C9I78_12965 PF01521 Iron-sulphur cluster biosynthesis C9I78_12970 PF01592 NifU-like N terminal domain C9I78_12975 PF00266 Aminotransferase class-V C9I78_12980 PF02082 Transcriptional regulator C9I78_12985 PF00588 SpoU rRNA Methylase family C9I78_12990 PF00459 Inositol monophosphatase family C9I78_13000 PF02355 Protein export membrane protein C9I78_13000 PF07549 SecD/SecF GG Motif C9I78_13005 PF13721 SecD export protein N-terminal TM region C9I78_13005 PF07549 SecD/SecF GG Motif C9I78_13005 PF02355 Protein export membrane protein C9I78_13010 PF02699 Preprotein translocase subunit C9I78_13015 PF01702 Queuine tRNA-ribosyltransferase C9I78_13020 PF02547 Queuosine biosynthesis protein C9I78_13035 PF00571 CBS domain C9I78_13040 PF00463 Isocitrate lyase family C9I78_13045 PF01274 Malate synthase C9I78_13055 PF03466 LysR substrate binding domain C9I78_13055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_13060 PF00578 AhpC/TSA family C9I78_13060 PF10417 C-terminal domain of 1-Cys peroxiredoxin C9I78_13070 PF03932 CutC family C9I78_13075 PF03976 Polyphosphate kinase 2 (PPK2) C9I78_13080 PF01895 PhoU domain C9I78_13085 PF00005 ABC transporter C9I78_13090 PF00528 Binding-protein-dependent transport system inner membrane component C9I78_13095 PF00528 Binding-protein-dependent transport system inner membrane component C9I78_13100 PF02503 Polyphosphate kinase middle domain C9I78_13100 PF13090 Polyphosphate kinase C-terminal domain 2 C9I78_13100 PF13089 Polyphosphate kinase N-terminal domain C9I78_13100 PF17941 Polyphosphate kinase C-terminal domain 1 C9I78_13105 PF02541 Ppx/GppA phosphatase family C9I78_13110 PF12849 PBP superfamily domain C9I78_13115 PF00512 His Kinase A (phospho-acceptor) domain C9I78_13115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_13115 PF11808 Phosphate regulon sensor protein PhoR C9I78_13115 PF00989 PAS fold C9I78_13120 PF00486 Transcriptional regulatory protein, C terminal C9I78_13120 PF00072 Response regulator receiver domain C9I78_13130 PF04381 Putative exonuclease, RdgC C9I78_13140 PF00037 4Fe-4S binding domain C9I78_13150 PF03411 Penicillin-insensitive murein endopeptidase C9I78_13200 PF10431 C-terminal, D2-small domain, of ClpB protein C9I78_13200 PF02861 Clp amino terminal domain, pathogenicity island component C9I78_13200 PF17871 AAA lid domain C9I78_13200 PF00004 ATPase family associated with various cellular activities (AAA) C9I78_13200 PF07724 AAA domain (Cdc48 subfamily) C9I78_13210 PF01479 S4 domain C9I78_13210 PF00849 RNA pseudouridylate synthase C9I78_13215 PF13525 Outer membrane lipoprotein C9I78_13220 PF01464 Transglycosylase SLT domain C9I78_13225 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C9I78_13230 PF01817 Chorismate mutase type II C9I78_13230 PF00800 Prephenate dehydratase C9I78_13235 PF01931 Protein of unknown function DUF84 C9I78_13240 PF01371 Trp repressor protein C9I78_13245 PF01464 Transglycosylase SLT domain C9I78_13245 PF14718 Soluble lytic murein transglycosylase L domain C9I78_13250 PF00005 ABC transporter C9I78_13250 PF12848 ABC transporter C9I78_13260 PF07238 PilZ domain C9I78_13265 PF04225 Opacity-associated protein A LysM-like domain C9I78_13265 PF01551 Peptidase family M23 C9I78_13270 PF02153 Prephenate dehydrogenase C9I78_13270 PF01817 Chorismate mutase type II C9I78_13275 PF00793 DAHP synthetase I family C9I78_13280 PF00933 Glycosyl hydrolase family 3 N terminal domain C9I78_13285 PF03702 Anhydro-N-acetylmuramic acid kinase C9I78_13290 PF13580 SIS domain C9I78_13305 PF02554 Carbon starvation protein CstA C9I78_13310 PF06580 Histidine kinase C9I78_13310 PF07694 5TMR of 5TMR-LYT C9I78_13315 PF04397 LytTr DNA-binding domain C9I78_13315 PF00072 Response regulator receiver domain C9I78_13320 PF02401 LytB protein C9I78_13325 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C9I78_13330 PF01252 Signal peptidase (SPase) II C9I78_13335 PF08264 Anticodon-binding domain of tRNA C9I78_13335 PF00133 tRNA synthetases class I (I, L, M and V) C9I78_13335 PF06827 Zinc finger found in FPG and IleRS C9I78_13340 PF06574 FAD synthetase C9I78_13340 PF01687 Riboflavin kinase C9I78_13345 PF03023 Lipid II flippase MurJ C9I78_13350 PF01649 Ribosomal protein S20 C9I78_13360 PF01022 Bacterial regulatory protein, arsR family C9I78_13370 PF03466 LysR substrate binding domain C9I78_13370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_13375 PF02690 Na+/Pi-cotransporter C9I78_13385 PF00303 Thymidylate synthase C9I78_13390 PF01790 Prolipoprotein diacylglyceryl transferase C9I78_13395 PF01925 Sulfite exporter TauE/SafE C9I78_13400 PF01590 GAF domain C9I78_13400 PF00391 PEP-utilising enzyme, mobile domain C9I78_13400 PF05524 PEP-utilising enzyme, N-terminal C9I78_13400 PF02896 PEP-utilising enzyme, TIM barrel domain C9I78_13405 PF00293 NUDIX domain C9I78_13415 PF02976 DNA mismatch repair enzyme MutH C9I78_13425 PF00248 Aldo/keto reductase family C9I78_13435 PF00158 Sigma-54 interaction domain C9I78_13435 PF02954 Bacterial regulatory protein, Fis family C9I78_13435 PF00072 Response regulator receiver domain C9I78_13440 PF01336 OB-fold nucleic acid binding domain C9I78_13440 PF00152 tRNA synthetases class II (D, K and N) C9I78_13450 PF01368 DHH family C9I78_13450 PF02272 DHHA1 domain C9I78_13450 PF17768 RecJ OB domain C9I78_13455 PF13098 Thioredoxin-like domain C9I78_13455 PF10411 Disulfide bond isomerase protein N-terminus C9I78_13460 PF02899 Phage integrase, N-terminal SAM-like domain C9I78_13460 PF00589 Phage integrase family C9I78_13465 PF00258 Flavodoxin C9I78_13470 PF05525 Branched-chain amino acid transport protein C9I78_13475 PF05175 Methyltransferase small domain C9I78_13480 PF00271 Helicase conserved C-terminal domain C9I78_13480 PF00270 DEAD/DEAH box helicase C9I78_13485 PF03883 Peroxide stress protein YaaA C9I78_13490 PF01235 Sodium:alanine symporter family C9I78_13505 PF03167 Uracil DNA glycosylase superfamily C9I78_13515 PF01261 Xylose isomerase-like TIM barrel C9I78_13520 PF01228 Glycine radical C9I78_13525 PF01228 Glycine radical C9I78_13575 PF00291 Pyridoxal-phosphate dependent enzyme C9I78_13575 PF14821 Threonine synthase N terminus C9I78_13580 PF00288 GHMP kinases N terminal domain C9I78_13580 PF08544 GHMP kinases C terminal C9I78_13585 PF01842 ACT domain C9I78_13585 PF00742 Homoserine dehydrogenase C9I78_13585 PF13840 ACT domain C9I78_13585 PF00696 Amino acid kinase family C9I78_13585 PF03447 Homoserine dehydrogenase, NAD binding domain C9I78_13595 PF03737 Aldolase/RraA C9I78_13610 PF00072 Response regulator receiver domain C9I78_13610 PF00486 Transcriptional regulatory protein, C terminal C9I78_13620 PF18415 Histidine kinase receptor ArcB trans-membrane domain C9I78_13620 PF00072 Response regulator receiver domain C9I78_13620 PF01627 Hpt domain C9I78_13620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_13620 PF00989 PAS fold C9I78_13620 PF00512 His Kinase A (phospho-acceptor) domain C9I78_13625 PF00990 Diguanylate cyclase, GGDEF domain C9I78_13625 PF00360 Phytochrome region C9I78_13625 PF01590 GAF domain C9I78_13625 PF00563 EAL domain C9I78_13630 PF04055 Radical SAM superfamily C9I78_13630 PF16199 Radical_SAM C-terminal domain C9I78_13635 PF04898 Glutamate synthase central domain C9I78_13635 PF01645 Conserved region in glutamate synthase C9I78_13635 PF01493 GXGXG motif C9I78_13635 PF00310 Glutamine amidotransferases class-II C9I78_13640 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C9I78_13640 PF07992 Pyridine nucleotide-disulphide oxidoreductase C9I78_13645 PF00310 Glutamine amidotransferases class-II C9I78_13645 PF04898 Glutamate synthase central domain C9I78_13645 PF01645 Conserved region in glutamate synthase C9I78_13645 PF01493 GXGXG motif C9I78_13650 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C9I78_13650 PF07992 Pyridine nucleotide-disulphide oxidoreductase C9I78_13660 PF01048 Phosphorylase superfamily C9I78_13665 PF03186 CobD/Cbib protein C9I78_13665 PF17113 Regulatory signalling modulator protein AmpE C9I78_13670 PF01497 Periplasmic binding protein C9I78_13675 PF03458 UPF0126 domain C9I78_13680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_13680 PF03466 LysR substrate binding domain C9I78_13685 PF01925 Sulfite exporter TauE/SafE C9I78_13700 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C9I78_13700 PF02142 MGS-like domain C9I78_13700 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C9I78_13705 PF00117 Glutamine amidotransferase class-I C9I78_13705 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain C9I78_13710 PF01113 Dihydrodipicolinate reductase, N-terminus C9I78_13710 PF05173 Dihydrodipicolinate reductase, C-terminus C9I78_13715 PF00293 NUDIX domain C9I78_13720 PF07517 SecA DEAD-like domain C9I78_13720 PF01043 SecA preprotein cross-linking domain C9I78_13720 PF02810 SEC-C motif C9I78_13720 PF07516 SecA Wing and Scaffold domain C9I78_13730 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase C9I78_13735 PF00091 Tubulin/FtsZ family, GTPase domain C9I78_13735 PF12327 FtsZ family, C-terminal domain C9I78_13740 PF02491 SHS2 domain inserted in FTSA C9I78_13745 PF08478 POTRA domain, FtsQ-type C9I78_13745 PF03799 Cell division protein FtsQ C9I78_13750 PF08245 Mur ligase middle domain C9I78_13750 PF02875 Mur ligase family, glutamate ligase domain C9I78_13750 PF01225 Mur ligase family, catalytic domain C9I78_13755 PF03033 Glycosyltransferase family 28 N-terminal domain C9I78_13755 PF04101 Glycosyltransferase family 28 C-terminal domain C9I78_13760 PF01098 Cell cycle protein C9I78_13765 PF02875 Mur ligase family, glutamate ligase domain C9I78_13765 PF08245 Mur ligase middle domain C9I78_13770 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 C9I78_13770 PF00953 Glycosyl transferase family 4 C9I78_13775 PF01225 Mur ligase family, catalytic domain C9I78_13775 PF02875 Mur ligase family, glutamate ligase domain C9I78_13775 PF08245 Mur ligase middle domain C9I78_13780 PF08245 Mur ligase middle domain C9I78_13780 PF02875 Mur ligase family, glutamate ligase domain C9I78_13780 PF01225 Mur ligase family, catalytic domain C9I78_13785 PF00905 Penicillin binding protein transpeptidase domain C9I78_13785 PF03717 Penicillin-binding Protein dimerisation domain C9I78_13790 PF04999 Cell division protein FtsL C9I78_13795 PF01795 MraW methylase family C9I78_13810 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C9I78_13815 PF04348 LppC putative lipoprotein C9I78_13820 PF02021 Uncharacterised protein family UPF0102 C9I78_13825 PF13580 SIS domain C9I78_13830 PF04972 BON domain C9I78_13835 PF04386 Stringent starvation protein B C9I78_13840 PF02798 Glutathione S-transferase, N-terminal domain C9I78_13840 PF00043 Glutathione S-transferase, C-terminal domain C9I78_13845 PF02167 Cytochrome C1 family C9I78_13850 PF00032 Cytochrome b(C-terminal)/b6/petD C9I78_13850 PF00033 Cytochrome b/b6/petB C9I78_13855 PF00355 Rieske [2Fe-2S] domain C9I78_13855 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal C9I78_13860 PF00380 Ribosomal protein S9/S16 C9I78_13865 PF00572 Ribosomal protein L13 C9I78_13875 PF03969 AFG1-like ATPase C9I78_13885 PF06295 Protein of unknown function (DUF1043) C9I78_13890 PF00595 PDZ domain C9I78_13895 PF13180 PDZ domain C9I78_13900 PF03989 DNA gyrase C-terminal domain, beta-propeller C9I78_13900 PF00521 DNA gyrase/topoisomerase IV, subunit A C9I78_13905 PF00986 DNA gyrase B subunit, carboxyl terminus C9I78_13905 PF01751 Toprim domain C9I78_13905 PF00204 DNA gyrase B C9I78_13905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_13910 PF05728 Uncharacterised protein family (UPF0227) C9I78_13915 PF00149 Calcineurin-like phosphoesterase C9I78_13920 PF06853 Protein of unknown function (DUF1249) C9I78_13925 PF00293 NUDIX domain C9I78_13930 PF02321 Outer membrane efflux protein C9I78_13935 PF01467 Cytidylyltransferase-like C9I78_13935 PF00294 pfkB family carbohydrate kinase C9I78_13940 PF08335 GlnD PII-uridylyltransferase C9I78_13940 PF03710 Glutamate-ammonia ligase adenylyltransferase C9I78_13945 PF00672 HAMP domain C9I78_13945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C9I78_13955 PF01928 CYTH domain C9I78_13960 PF01865 Protein of unknown function DUF47 C9I78_13965 PF01384 Phosphate transporter family C9I78_13970 PF08239 Bacterial SH3 domain C9I78_13980 PF13401 AAA domain C9I78_13980 PF01471 Putative peptidoglycan binding domain C9I78_13985 PF01966 HD domain C9I78_13985 PF12627 Probable RNA and SrmB- binding site of polymerase A C9I78_13985 PF01743 Poly A polymerase head domain C9I78_13990 PF02673 Bacitracin resistance protein BacA C9I78_13995 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C9I78_14000 PF02152 Dihydroneopterin aldolase C9I78_14005 PF02660 Glycerol-3-phosphate acyltransferase C9I78_14010 PF12697 Alpha/beta hydrolase family C9I78_14015 PF00814 Glycoprotease family C9I78_14020 PF01165 Ribosomal protein S21 C9I78_14025 PF09424 Yqey-like protein C9I78_14030 PF08275 DNA primase catalytic core, N-terminal domain C9I78_14030 PF08278 DNA primase DnaG DnaB-binding C9I78_14030 PF01807 CHC2 zinc finger C9I78_14030 PF10410 DnaB-helicase binding domain of primase C9I78_14035 PF04546 Sigma-70, non-essential region C9I78_14035 PF03979 Sigma-70 factor, region 1.1 C9I78_14035 PF00140 Sigma-70 factor, region 1.2 C9I78_14035 PF04545 Sigma-70, region 4 C9I78_14035 PF04539 Sigma-70 region 3 C9I78_14035 PF04542 Sigma-70 region 2 C9I78_14045 PF00145 C-5 cytosine-specific DNA methylase C9I78_14080 PF07196 Flagellin hook IN motif C9I78_14080 PF00700 Bacterial flagellin C-terminal helical region C9I78_14080 PF00669 Bacterial flagellin N-terminal helical region C9I78_14085 PF13737 Transposase DDE domain C9I78_14090 PF00700 Bacterial flagellin C-terminal helical region C9I78_14090 PF07196 Flagellin hook IN motif C9I78_14090 PF00669 Bacterial flagellin N-terminal helical region C9I78_14105 PF13657 HipA N-terminal domain C9I78_14105 PF07804 HipA-like C-terminal domain C9I78_14115 PF00563 EAL domain C9I78_14115 PF03707 Bacterial signalling protein N terminal repeat C9I78_14115 PF00990 Diguanylate cyclase, GGDEF domain C9I78_14145 PF04851 Type III restriction enzyme, res subunit C9I78_14145 PF00271 Helicase conserved C-terminal domain C9I78_14145 PF08463 EcoEI R protein C-terminal C9I78_14145 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) C9I78_14160 PF02384 N-6 DNA Methylase C9I78_14160 PF12161 HsdM N-terminal domain C9I78_14165 PF01420 Type I restriction modification DNA specificity domain C9I78_14200 PF03193 RsgA GTPase C9I78_14205 PF02899 Phage integrase, N-terminal SAM-like domain C9I78_14205 PF00589 Phage integrase family C9I78_14210 PF00990 Diguanylate cyclase, GGDEF domain C9I78_14210 PF08448 PAS fold C9I78_14245 PF03180 NLPA lipoprotein C9I78_14255 PF12833 Helix-turn-helix domain C9I78_14290 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C9I78_14290 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C9I78_14290 PF02378 Phosphotransferase system, EIIC C9I78_14295 PF01232 Mannitol dehydrogenase Rossmann domain C9I78_14295 PF08125 Mannitol dehydrogenase C-terminal domain C9I78_14300 PF05068 Mannitol repressor C9I78_14305 PF00158 Sigma-54 interaction domain C9I78_14305 PF00989 PAS fold C9I78_14305 PF02954 Bacterial regulatory protein, Fis family C9I78_14310 PF00391 PEP-utilising enzyme, mobile domain C9I78_14310 PF02896 PEP-utilising enzyme, TIM barrel domain C9I78_14310 PF05524 PEP-utilising enzyme, N-terminal C9I78_14315 PF02734 DAK2 domain C9I78_14320 PF02733 Dak1 domain C9I78_14325 PF00465 Iron-containing alcohol dehydrogenase C9I78_14330 PF00672 HAMP domain C9I78_14330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_14330 PF00512 His Kinase A (phospho-acceptor) domain C9I78_14335 PF00486 Transcriptional regulatory protein, C terminal C9I78_14335 PF00072 Response regulator receiver domain C9I78_14345 PF01380 SIS domain C9I78_14350 PF08220 DeoR-like helix-turn-helix domain C9I78_14350 PF00455 DeoR C terminal sensor domain C9I78_14360 PF02887 Pyruvate kinase, alpha/beta domain C9I78_14360 PF00224 Pyruvate kinase, barrel domain C9I78_14370 PF00990 Diguanylate cyclase, GGDEF domain C9I78_14370 PF07694 5TMR of 5TMR-LYT C9I78_14375 PF10369 Small subunit of acetolactate synthase C9I78_14380 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C9I78_14380 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C9I78_14380 PF00205 Thiamine pyrophosphate enzyme, central domain C9I78_14385 PF00501 AMP-binding enzyme C9I78_14390 PF03466 LysR substrate binding domain C9I78_14390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_14410 PF08502 LeuA allosteric (dimerisation) domain C9I78_14410 PF00682 HMGL-like C9I78_14415 PF00180 Isocitrate/isopropylmalate dehydrogenase C9I78_14420 PF00330 Aconitase family (aconitate hydratase) C9I78_14425 PF00694 Aconitase C-terminal domain C9I78_14435 PF00226 DnaJ domain C9I78_14435 PF05099 Tellurite resistance protein TerB C9I78_14440 PF04453 LPS transport system D C9I78_14440 PF03968 OstA-like protein C9I78_14445 PF09312 SurA N-terminal domain C9I78_14450 PF04166 Pyridoxal phosphate biosynthetic protein PdxA C9I78_14455 PF00398 Ribosomal RNA adenine dimethylase C9I78_14460 PF04379 ApaG domain C9I78_14465 PF00149 Calcineurin-like phosphoesterase C9I78_14470 PF00186 Dihydrofolate reductase C9I78_14475 PF12821 Threonine/Serine exporter, ThrE C9I78_14480 PF06738 Putative threonine/serine exporter C9I78_14485 PF01926 50S ribosome-binding GTPase C9I78_14485 PF01018 GTP1/OBG C9I78_14490 PF01016 Ribosomal L27 protein C9I78_14495 PF00829 Ribosomal prokaryotic L21 protein C9I78_14500 PF00348 Polyprenyl synthetase C9I78_14510 PF00056 lactate/malate dehydrogenase, NAD binding domain C9I78_14510 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain C9I78_14515 PF01316 Arginine repressor, DNA binding domain C9I78_14515 PF02863 Arginine repressor, C-terminal domain C9I78_14525 PF16868 NMT1-like family C9I78_14545 PF00005 ABC transporter C9I78_14550 PF00528 Binding-protein-dependent transport system inner membrane component C9I78_14560 PF02441 Flavoprotein C9I78_14565 PF01225 Mur ligase family, catalytic domain C9I78_14565 PF02875 Mur ligase family, glutamate ligase domain C9I78_14565 PF08245 Mur ligase middle domain C9I78_14575 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain C9I78_14580 PF00719 Inorganic pyrophosphatase C9I78_14590 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like C9I78_14595 PF04357 TamB, inner membrane protein subunit of TAM complex C9I78_14600 PF17243 POTRA domain TamA domain 1 C9I78_14600 PF01103 Surface antigen C9I78_14605 PF01625 Peptide methionine sulfoxide reductase C9I78_14610 PF06526 Protein of unknown function (DUF1107) C9I78_14615 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) C9I78_14620 PF10795 Protein of unknown function (DUF2607) C9I78_14630 PF00005 ABC transporter C9I78_14655 PF03600 Citrate transporter C9I78_14655 PF02080 TrkA-C domain C9I78_14665 PF00009 Elongation factor Tu GTP binding domain C9I78_14670 PF01507 Phosphoadenosine phosphosulfate reductase family C9I78_14675 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C9I78_14675 PF10414 Sirohaem synthase dimerisation region C9I78_14675 PF14824 Sirohaem biosynthesis protein central C9I78_14680 PF00149 Calcineurin-like phosphoesterase C9I78_14680 PF02872 5'-nucleotidase, C-terminal domain C9I78_14690 PF00270 DEAD/DEAH box helicase C9I78_14690 PF00271 Helicase conserved C-terminal domain C9I78_14690 PF03880 DbpA RNA binding domain C9I78_14695 PF13673 Acetyltransferase (GNAT) domain C9I78_14705 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C9I78_14705 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C9I78_14715 PF01196 Ribosomal protein L17 C9I78_14720 PF01000 RNA polymerase Rpb3/RpoA insert domain C9I78_14720 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain C9I78_14720 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain C9I78_14725 PF01479 S4 domain C9I78_14725 PF00163 Ribosomal protein S4/S9 N-terminal domain C9I78_14730 PF00411 Ribosomal protein S11 C9I78_14735 PF00416 Ribosomal protein S13/S18 C9I78_14740 PF00444 Ribosomal protein L36 C9I78_14745 PF00344 SecY translocase C9I78_14750 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A C9I78_14755 PF00327 Ribosomal protein L30p/L7e C9I78_14760 PF00333 Ribosomal protein S5, N-terminal domain C9I78_14760 PF03719 Ribosomal protein S5, C-terminal domain C9I78_14765 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast C9I78_14770 PF00347 Ribosomal protein L6 C9I78_14775 PF00410 Ribosomal protein S8 C9I78_14780 PF00253 Ribosomal protein S14p/S29e C9I78_14785 PF00281 Ribosomal protein L5 C9I78_14785 PF00673 ribosomal L5P family C-terminus C9I78_14790 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 C9I78_14790 PF00467 KOW motif C9I78_14795 PF00238 Ribosomal protein L14p/L23e C9I78_14800 PF00366 Ribosomal protein S17 C9I78_14805 PF00831 Ribosomal L29 protein C9I78_14810 PF00252 Ribosomal protein L16p/L10e C9I78_14815 PF07650 KH domain C9I78_14815 PF00189 Ribosomal protein S3, C-terminal domain C9I78_14820 PF00237 Ribosomal protein L22p/L17e C9I78_14825 PF00203 Ribosomal protein S19 C9I78_14830 PF00181 Ribosomal Proteins L2, RNA binding domain C9I78_14830 PF03947 Ribosomal Proteins L2, C-terminal domain C9I78_14835 PF00276 Ribosomal protein L23 C9I78_14840 PF00573 Ribosomal protein L4/L1 family C9I78_14845 PF00297 Ribosomal protein L3 C9I78_14850 PF00338 Ribosomal protein S10p/S20e C9I78_14855 PF01197 Ribosomal protein L31 C9I78_14865 PF18319 PriA DNA helicase Cys-rich region (CRR) domain C9I78_14865 PF00270 DEAD/DEAH box helicase C9I78_14865 PF17764 3′ DNA-binding domain (3′BD) C9I78_14865 PF00271 Helicase conserved C-terminal domain C9I78_14865 PF18074 Primosomal protein N C-terminal domain C9I78_14870 PF00356 Bacterial regulatory proteins, lacI family C9I78_14880 PF00227 Proteasome subunit C9I78_14885 PF07724 AAA domain (Cdc48 subfamily) C9I78_14885 PF00004 ATPase family associated with various cellular activities (AAA) C9I78_14890 PF01040 UbiA prenyltransferase family C9I78_14895 PF03737 Aldolase/RraA C9I78_14900 PF06005 Cell division protein ZapB C9I78_14910 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded C9I78_14915 PF08220 DeoR-like helix-turn-helix domain C9I78_14915 PF00455 DeoR C terminal sensor domain C9I78_14935 PF00121 Triosephosphate isomerase C9I78_14940 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain C9I78_14940 PF00753 Metallo-beta-lactamase superfamily C9I78_14940 PF10996 Beta-Casp domain C9I78_14945 PF00483 Nucleotidyl transferase C9I78_14950 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C9I78_14950 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C9I78_14950 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C9I78_14955 PF02397 Bacterial sugar transferase C9I78_14960 PF00535 Glycosyl transferase family 2 C9I78_14970 PF00534 Glycosyl transferases group 1 C9I78_14970 PF17103 Stealth protein CR4, conserved region 4 C9I78_14970 PF17101 Stealth protein CR1, conserved region 1 C9I78_14970 PF11380 Stealth protein CR2, conserved region 2 C9I78_14970 PF17102 Stealth protein CR3, conserved region 3 C9I78_14975 PF00535 Glycosyl transferase family 2 C9I78_14995 PF02706 Chain length determinant protein C9I78_15025 PF06082 Exopolysaccharide biosynthesis protein YbjH C9I78_15030 PF01370 NAD dependent epimerase/dehydratase family C9I78_15035 PF03279 Bacterial lipid A biosynthesis acyltransferase C9I78_15045 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C9I78_15050 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) C9I78_15060 PF02719 Polysaccharide biosynthesis protein C9I78_15065 PF00733 Asparagine synthase C9I78_15065 PF13537 Glutamine amidotransferase domain C9I78_15070 PF02397 Bacterial sugar transferase C9I78_15080 PF03023 Lipid II flippase MurJ C9I78_15090 PF02348 Cytidylyltransferase C9I78_15100 PF01219 Prokaryotic diacylglycerol kinase C9I78_15105 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C9I78_15110 PF00535 Glycosyl transferase family 2 C9I78_15115 PF00535 Glycosyl transferase family 2 C9I78_15120 PF05686 Glycosyl transferase family 90 C9I78_15125 PF01467 Cytidylyltransferase-like C9I78_15130 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain C9I78_15130 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain C9I78_15130 PF06827 Zinc finger found in FPG and IleRS C9I78_15140 PF00884 Sulfatase C9I78_15145 PF00471 Ribosomal protein L33 C9I78_15150 PF00830 Ribosomal L28 family C9I78_15155 PF04002 RadC-like JAB domain C9I78_15160 PF17200 Single Cache domain 2 C9I78_15160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C9I78_15160 PF00672 HAMP domain C9I78_15170 PF02441 Flavoprotein C9I78_15170 PF04127 DNA / pantothenate metabolism flavoprotein C9I78_15175 PF00440 Bacterial regulatory proteins, tetR family C9I78_15180 PF03279 Bacterial lipid A biosynthesis acyltransferase C9I78_15185 PF00156 Phosphoribosyl transferase domain C9I78_15190 PF03725 3' exoribonuclease family, domain 2 C9I78_15190 PF01138 3' exoribonuclease family, domain 1 C9I78_15200 PF03755 YicC-like family, N-terminal region C9I78_15200 PF08340 Domain of unknown function (DUF1732) C9I78_15255 PF18272 single-stranded DNA binding TraI N-terminal subdomain C9I78_15255 PF07057 DNA helicase TraI C9I78_15255 PF18340 DNA relaxase TraI 2B/2B-like domain C9I78_15255 PF08751 TrwC relaxase C9I78_15280 PF01555 DNA methylase C9I78_15335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C9I78_15335 PF00005 ABC transporter C9I78_15340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C9I78_15340 PF00005 ABC transporter C9I78_15345 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C9I78_15355 PF00528 Binding-protein-dependent transport system inner membrane component C9I78_15365 PF07715 TonB-dependent Receptor Plug Domain C9I78_15365 PF00593 TonB dependent receptor C9I78_15380 PF01618 MotA/TolQ/ExbB proton channel family C9I78_15385 PF02472 Biopolymer transport protein ExbD/TolR C9I78_15400 PF00625 Guanylate kinase C9I78_15405 PF01192 RNA polymerase Rpb6 C9I78_15410 PF04607 Region found in RelA / SpoT proteins C9I78_15410 PF13291 ACT domain C9I78_15410 PF02824 TGS domain C9I78_15415 PF12105 SpoU, rRNA methylase, C-terminal C9I78_15415 PF00588 SpoU rRNA Methylase family C9I78_15420 PF17191 RecG wedge domain C9I78_15420 PF00270 DEAD/DEAH box helicase C9I78_15420 PF00271 Helicase conserved C-terminal domain C9I78_15430 PF00860 Permease family C9I78_15435 PF00512 His Kinase A (phospho-acceptor) domain C9I78_15435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_15435 PF00672 HAMP domain C9I78_15440 PF00486 Transcriptional regulatory protein, C terminal C9I78_15440 PF00072 Response regulator receiver domain C9I78_15450 PF03449 Transcription elongation factor, N-terminal C9I78_15450 PF01272 Transcription elongation factor, GreA/GreB, C-term C9I78_15460 PF17674 HHH domain C9I78_15460 PF16921 Tex protein YqgF-like domain C9I78_15460 PF09371 Tex-like protein N-terminal domain C9I78_15460 PF00575 S1 RNA binding domain C9I78_15470 PF00561 alpha/beta hydrolase fold C9I78_15475 PF00156 Phosphoribosyl transferase domain C9I78_15480 PF01106 NifU-like domain C9I78_15480 PF01521 Iron-sulphur cluster biosynthesis C9I78_15485 PF00293 NUDIX domain C9I78_15490 PF00459 Inositol monophosphatase family C9I78_15495 PF01203 Type II secretion system (T2SS), protein N C9I78_15500 PF04612 Type II secretion system (T2SS), protein M C9I78_15505 PF12693 GspL periplasmic domain C9I78_15505 PF05134 Type II secretion system (T2SS), protein L C9I78_15510 PF03934 Type II secretion system (T2SS), protein K C9I78_15515 PF07963 Prokaryotic N-terminal methylation motif C9I78_15515 PF11612 Type II secretion system (T2SS), protein J C9I78_15520 PF02501 Type II secretion system (T2SS), protein I C9I78_15520 PF07963 Prokaryotic N-terminal methylation motif C9I78_15525 PF12019 Type II transport protein GspH C9I78_15530 PF08334 Type II secretion system (T2SS), protein G C9I78_15530 PF07963 Prokaryotic N-terminal methylation motif C9I78_15535 PF00482 Type II secretion system (T2SS), protein F C9I78_15540 PF00437 Type II/IV secretion system protein C9I78_15545 PF03958 Bacterial type II/III secretion system short domain C9I78_15545 PF00263 Bacterial type II and III secretion system protein C9I78_15550 PF11356 Type II secretion system protein C C9I78_15555 PF01479 S4 domain C9I78_15560 PF01430 Hsp33 protein C9I78_15565 PF01293 Phosphoenolpyruvate carboxykinase C9I78_15575 PF00583 Acetyltransferase (GNAT) family C9I78_15575 PF09500 Putative thioesterase (yiiD_Cterm) C9I78_15580 PF02580 D-Tyr-tRNA(Tyr) deacylase C9I78_15585 PF03631 Virulence factor BrkB C9I78_15605 PF00120 Glutamine synthetase, catalytic domain C9I78_15605 PF03951 Glutamine synthetase, beta-Grasp domain C9I78_15615 PF00989 PAS fold C9I78_15615 PF00512 His Kinase A (phospho-acceptor) domain C9I78_15615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_15620 PF02954 Bacterial regulatory protein, Fis family C9I78_15620 PF00072 Response regulator receiver domain C9I78_15620 PF00158 Sigma-54 interaction domain C9I78_15625 PF03707 Bacterial signalling protein N terminal repeat C9I78_15625 PF00990 Diguanylate cyclase, GGDEF domain C9I78_15625 PF00563 EAL domain C9I78_15630 PF00962 Adenosine/AMP deaminase C9I78_15635 PF04055 Radical SAM superfamily C9I78_15635 PF06969 HemN C-terminal domain C9I78_15640 PF10675 Protein of unknown function (DUF2489) C9I78_15645 PF04220 Der GTPase activator (YihI) C9I78_15665 PF00034 Cytochrome c C9I78_15670 PF01926 50S ribosome-binding GTPase C9I78_15680 PF01612 3'-5' exonuclease C9I78_15680 PF00476 DNA polymerase family A C9I78_15680 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C9I78_15680 PF01367 5'-3' exonuclease, C-terminal SAM fold C9I78_15695 PF00490 Delta-aminolevulinic acid dehydratase C9I78_15705 PF01026 TatD related DNase C9I78_15715 PF00902 Sec-independent protein translocase protein (TatC) C9I78_15720 PF02416 mttA/Hcf106 family C9I78_15725 PF02416 mttA/Hcf106 family C9I78_15730 PF03109 ABC1 family C9I78_15735 PF02036 SCP-2 sterol transfer family C9I78_15740 PF01209 ubiE/COQ5 methyltransferase family C9I78_15745 PF02646 RmuC family C9I78_15755 PF00990 Diguanylate cyclase, GGDEF domain C9I78_15755 PF03707 Bacterial signalling protein N terminal repeat C9I78_15755 PF00563 EAL domain C9I78_15760 PF01594 AI-2E family transporter C9I78_15790 PF00781 Diacylglycerol kinase catalytic domain C9I78_15810 PF04972 BON domain C9I78_15815 PF00158 Sigma-54 interaction domain C9I78_15815 PF02954 Bacterial regulatory protein, Fis family C9I78_15815 PF01590 GAF domain C9I78_15825 PF10625 Universal stress protein B (UspB) C9I78_15830 PF00210 Ferritin-like domain C9I78_15835 PF00582 Universal stress protein family C9I78_15840 PF00892 EamA-like transporter family C9I78_15850 PF04445 Putative SAM-dependent methyltransferase C9I78_15855 PF00990 Diguanylate cyclase, GGDEF domain C9I78_15855 PF08448 PAS fold C9I78_15855 PF00563 EAL domain C9I78_15860 PF01037 Lrp/AsnC ligand binding domain C9I78_15865 PF01432 Peptidase family M3 C9I78_15875 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ C9I78_15880 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C9I78_15880 PF07992 Pyridine nucleotide-disulphide oxidoreductase C9I78_15885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_15885 PF03466 LysR substrate binding domain C9I78_15890 PF01048 Phosphorylase superfamily C9I78_15895 PF01081 KDPG and KHG aldolase C9I78_15900 PF02447 GntP family permease C9I78_15905 PF01202 Shikimate kinase C9I78_15910 PF00920 Dehydratase family C9I78_15915 PF00893 Small Multidrug Resistance protein C9I78_15920 PF00893 Small Multidrug Resistance protein C9I78_15925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_15925 PF03466 LysR substrate binding domain C9I78_15930 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C9I78_15930 PF00356 Bacterial regulatory proteins, lacI family C9I78_15935 PF00069 Protein kinase domain C9I78_15970 PF00528 Binding-protein-dependent transport system inner membrane component C9I78_15970 PF12911 N-terminal TM domain of oligopeptide transport permease C C9I78_15980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C9I78_15985 PF00005 ABC transporter C9I78_15985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C9I78_16000 PF13419 Haloacid dehalogenase-like hydrolase C9I78_16035 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C9I78_16040 PF00580 UvrD/REP helicase N-terminal domain C9I78_16040 PF13361 UvrD-like helicase C-terminal domain C9I78_16045 PF16295 Tetracyclin repressor-like, C-terminal domain C9I78_16045 PF00440 Bacterial regulatory proteins, tetR family C9I78_16050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C9I78_16055 PF00873 AcrB/AcrD/AcrF family C9I78_16065 PF04380 Membrane fusogenic activity C9I78_16070 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain C9I78_16070 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain C9I78_16075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_16075 PF03466 LysR substrate binding domain C9I78_16120 PF12724 Flavodoxin domain C9I78_16125 PF02386 Cation transport protein C9I78_16130 PF09186 Domain of unknown function (DUF1949) C9I78_16130 PF01205 Uncharacterized protein family UPF0029 C9I78_16135 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C9I78_16135 PF00378 Enoyl-CoA hydratase/isomerase C9I78_16135 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C9I78_16140 PF02803 Thiolase, C-terminal domain C9I78_16140 PF00108 Thiolase, N-terminal domain C9I78_16145 PF00107 Zinc-binding dehydrogenase C9I78_16145 PF08240 Alcohol dehydrogenase GroES-like domain C9I78_16150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_16150 PF03466 LysR substrate binding domain C9I78_16160 PF01206 Sulfurtransferase TusA C9I78_16170 PF01169 Uncharacterized protein family UPF0016 C9I78_16175 PF02091 Glycyl-tRNA synthetase alpha subunit C9I78_16180 PF02092 Glycyl-tRNA synthetase beta subunit C9I78_16180 PF05746 DALR anticodon binding domain C9I78_16185 PF00128 Alpha amylase, catalytic domain C9I78_16190 PF00155 Aminotransferase class I and II C9I78_16195 PF00011 Hsp20/alpha crystallin family C9I78_16215 PF00204 DNA gyrase B C9I78_16215 PF00986 DNA gyrase B subunit, carboxyl terminus C9I78_16215 PF01751 Toprim domain C9I78_16215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_16215 PF18053 DNA gyrase B subunit insert domain C9I78_16220 PF02463 RecF/RecN/SMC N terminal domain C9I78_16225 PF02768 DNA polymerase III beta subunit, C-terminal domain C9I78_16225 PF00712 DNA polymerase III beta subunit, N-terminal domain C9I78_16225 PF02767 DNA polymerase III beta subunit, central domain C9I78_16230 PF08299 Bacterial dnaA protein helix-turn-helix C9I78_16230 PF00308 Bacterial dnaA protein C9I78_16230 PF11638 DnaA N-terminal domain C9I78_16240 PF00497 Bacterial extracellular solute-binding proteins, family 3 C9I78_16245 PF00528 Binding-protein-dependent transport system inner membrane component C9I78_16250 PF00005 ABC transporter C9I78_16255 PF00468 Ribosomal protein L34 C9I78_16260 PF00825 Ribonuclease P C9I78_16265 PF01809 Putative membrane protein insertion efficiency factor C9I78_16270 PF14849 YidC periplasmic domain C9I78_16270 PF02096 60Kd inner membrane protein C9I78_16275 PF10396 GTP-binding protein TrmE N-terminus C9I78_16275 PF12631 MnmE helical domain C9I78_16275 PF01926 50S ribosome-binding GTPase C9I78_16280 PF00258 Flavodoxin C9I78_16285 PF01134 Glucose inhibited division protein A C9I78_16285 PF13932 GidA associated domain C9I78_16290 PF02527 rRNA small subunit methyltransferase G C9I78_16295 PF13614 AAA domain C9I78_16300 PF02195 ParB-like nuclease domain C9I78_16300 PF17762 HTH domain found in ParB protein C9I78_16305 PF03899 ATP synthase I chain C9I78_16310 PF00119 ATP synthase A chain C9I78_16315 PF00137 ATP synthase subunit C C9I78_16320 PF00430 ATP synthase B/B' CF(0) C9I78_16325 PF00213 ATP synthase delta (OSCP) subunit C9I78_16330 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C9I78_16330 PF02874 ATP synthase alpha/beta family, beta-barrel domain C9I78_16330 PF00306 ATP synthase alpha/beta chain, C terminal domain C9I78_16335 PF00231 ATP synthase C9I78_16340 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C9I78_16340 PF02874 ATP synthase alpha/beta family, beta-barrel domain C9I78_16345 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain C9I78_16345 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain C9I78_16350 PF12804 MobA-like NTP transferase domain C9I78_16350 PF00132 Bacterial transferase hexapeptide (six repeats) C9I78_16355 PF00528 Binding-protein-dependent transport system inner membrane component C9I78_16360 PF00497 Bacterial extracellular solute-binding proteins, family 3 C9I78_16365 PF07690 Major Facilitator Superfamily C9I78_16370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_16370 PF03466 LysR substrate binding domain C9I78_16375 PF00585 C-terminal regulatory domain of Threonine dehydratase C9I78_16375 PF00291 Pyridoxal-phosphate dependent enzyme C9I78_16380 PF00920 Dehydratase family C9I78_16385 PF01063 Amino-transferase class IV C9I78_16395 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C9I78_16395 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C9I78_16395 PF00205 Thiamine pyrophosphate enzyme, central domain C9I78_16400 PF13335 Magnesium chelatase, subunit ChlI C-terminal C9I78_16400 PF01078 Magnesium chelatase, subunit ChlI C9I78_16410 PF01553 Acyltransferase C9I78_16415 PF01323 DSBA-like thioredoxin domain C9I78_16420 PF01636 Phosphotransferase enzyme family C9I78_16425 PF13746 4Fe-4S dicluster domain C9I78_16425 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase C9I78_16425 PF12801 4Fe-4S binding domain C9I78_16430 PF06288 Protein of unknown function (DUF1040) C9I78_16440 PF07070 SpoOM protein C9I78_16445 PF03006 Haemolysin-III related C9I78_16455 PF02386 Cation transport protein C9I78_16460 PF02080 TrkA-C domain C9I78_16460 PF02254 TrkA-N domain C9I78_16465 PF01189 16S rRNA methyltransferase RsmB/F C9I78_16465 PF01029 NusB family C9I78_16470 PF00551 Formyl transferase C9I78_16470 PF02911 Formyl transferase, C-terminal domain C9I78_16475 PF01327 Polypeptide deformylase C9I78_16485 PF17782 DprA winged helix domain C9I78_16485 PF02481 DNA recombination-mediator protein A C9I78_16490 PF04361 Protein of unknown function (DUF494) C9I78_16495 PF01396 Topoisomerase DNA binding C4 zinc finger C9I78_16500 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain C9I78_16500 PF02222 ATP-grasp domain C9I78_16505 PF00731 AIR carboxylase C9I78_16510 PF01300 Telomere recombination C9I78_16515 PF01218 Coproporphyrinogen III oxidase C9I78_16520 PF01488 Shikimate / quinate 5-dehydrogenase C9I78_16520 PF08501 Shikimate dehydrogenase substrate binding domain C9I78_16520 PF18317 Shikimate 5'-dehydrogenase C-terminal domain C9I78_16525 PF07369 Protein of unknown function (DUF1488) C9I78_16530 PF00132 Bacterial transferase hexapeptide (six repeats) C9I78_16595 PF02537 CrcB-like protein, Camphor Resistance (CrcB) C9I78_16600 PF01964 Radical SAM ThiC family C9I78_16600 PF13667 ThiC-associated domain C9I78_16605 PF02581 Thiamine monophosphate synthase C9I78_16610 PF00899 ThiF family C9I78_16615 PF02597 ThiS family C9I78_16620 PF05690 Thiazole biosynthesis protein ThiG C9I78_16625 PF04055 Radical SAM superfamily C9I78_16625 PF06968 Biotin and Thiamin Synthesis associated domain C9I78_16630 PF01321 Creatinase/Prolidase N-terminal domain C9I78_16630 PF00557 Metallopeptidase family M24 C9I78_16630 PF01321 Creatinase/Prolidase N-terminal domain C9I78_16630 PF00557 Metallopeptidase family M24 C9I78_16635 PF03466 LysR substrate binding domain C9I78_16635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_16640 PF07690 Major Facilitator Superfamily C9I78_16660 PF05114 Protein of unknown function (DUF692) C9I78_16670 PF00580 UvrD/REP helicase N-terminal domain C9I78_16670 PF13361 UvrD-like helicase C-terminal domain C9I78_16685 PF01810 LysE type translocator C9I78_16695 PF00892 EamA-like transporter family C9I78_16700 PF09382 RQC domain C9I78_16700 PF00570 HRDC domain C9I78_16700 PF00271 Helicase conserved C-terminal domain C9I78_16700 PF00270 DEAD/DEAH box helicase C9I78_16700 PF16124 RecQ zinc-binding C9I78_16715 PF02592 Putative vitamin uptake transporter C9I78_16720 PF02541 Ppx/GppA phosphatase family C9I78_16725 PF00271 Helicase conserved C-terminal domain C9I78_16725 PF00270 DEAD/DEAH box helicase C9I78_16730 PF00085 Thioredoxin C9I78_16735 PF07498 Rho termination factor, N-terminal domain C9I78_16735 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C9I78_16735 PF07497 Rho termination factor, RNA-binding domain C9I78_16750 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase C9I78_16755 PF00111 2Fe-2S iron-sulfur cluster binding domain C9I78_16760 PF00175 Oxidoreductase NAD-binding domain C9I78_16810 PF07219 HemY protein N-terminus C9I78_16815 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase C9I78_16820 PF02602 Uroporphyrinogen-III synthase HemD C9I78_16825 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain C9I78_16825 PF03900 Porphobilinogen deaminase, C-terminal domain C9I78_16830 PF12633 Adenylate cyclase NT domain C9I78_16830 PF01295 Adenylate cyclase, class-I C9I78_16835 PF01491 Frataxin-like domain C9I78_16845 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C9I78_16845 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C9I78_16850 PF01678 Diaminopimelate epimerase C9I78_16860 PF00589 Phage integrase family C9I78_16860 PF02899 Phage integrase, N-terminal SAM-like domain C9I78_16865 PF13419 Haloacid dehalogenase-like hydrolase C9I78_16870 PF10442 FIST C domain C9I78_16870 PF00563 EAL domain C9I78_16870 PF08495 FIST N domain C9I78_16870 PF00990 Diguanylate cyclase, GGDEF domain C9I78_16900 PF12146 Serine aminopeptidase, S33 C9I78_16905 PF01810 LysE type translocator C9I78_16910 PF00563 EAL domain C9I78_16910 PF08668 HDOD domain C9I78_16915 PF01022 Bacterial regulatory protein, arsR family C9I78_16920 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C9I78_16920 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C9I78_16980 PF01914 MarC family integral membrane protein C9I78_16985 PF12826 Helix-hairpin-helix motif C9I78_16985 PF00533 BRCA1 C Terminus (BRCT) domain C9I78_16985 PF03120 NAD-dependent DNA ligase OB-fold domain C9I78_16985 PF01653 NAD-dependent DNA ligase adenylation domain C9I78_16985 PF03119 NAD-dependent DNA ligase C4 zinc finger domain C9I78_17000 PF13538 UvrD-like helicase C-terminal domain C9I78_17000 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain C9I78_17000 PF14490 Helix-hairpin-helix containing domain C9I78_17040 PF00448 SRP54-type protein, GTPase domain C9I78_17040 PF02881 SRP54-type protein, helical bundle domain C9I78_17045 PF00005 ABC transporter C9I78_17050 PF18075 FtsX extracellular domain C9I78_17055 PF04545 Sigma-70, region 4 C9I78_17055 PF00140 Sigma-70 factor, region 1.2 C9I78_17055 PF04542 Sigma-70 region 2 C9I78_17065 PF00581 Rhodanese-like domain C9I78_17070 PF01694 Rhomboid family C9I78_17070 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease C9I78_17075 PF03748 Flagellar basal body-associated protein FliL C9I78_17080 PF04345 Chorismate lyase C9I78_17085 PF01040 UbiA prenyltransferase family C9I78_17090 PF01553 Acyltransferase C9I78_17105 PF01726 LexA DNA binding domain C9I78_17105 PF00717 Peptidase S24-like C9I78_17110 PF04072 Leucine carboxyl methyltransferase C9I78_17115 PF01554 MatE C9I78_17120 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C9I78_17120 PF07992 Pyridine nucleotide-disulphide oxidoreductase C9I78_17125 PF00440 Bacterial regulatory proteins, tetR family C9I78_17135 PF05958 tRNA (Uracil-5-)-methyltransferase C9I78_17140 PF07715 TonB-dependent Receptor Plug Domain C9I78_17140 PF00593 TonB dependent receptor C9I78_17150 PF01177 Asp/Glu/Hydantoin racemase C9I78_17220 PF13091 PLD-like domain C9I78_17230 PF01565 FAD binding domain C9I78_17230 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain C9I78_17235 PF08279 HTH domain C9I78_17235 PF02237 Biotin protein ligase C terminal domain C9I78_17235 PF03099 Biotin/lipoate A/B protein ligase family C9I78_17240 PF00485 Phosphoribulokinase / Uridine kinase family C9I78_17260 PF02796 Helix-turn-helix domain of resolvase C9I78_17260 PF00239 Resolvase, N terminal domain C9I78_17285 PF14490 Helix-hairpin-helix containing domain C9I78_17285 PF13538 UvrD-like helicase C-terminal domain C9I78_17285 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain C9I78_17315 PF02796 Helix-turn-helix domain of resolvase C9I78_17315 PF00239 Resolvase, N terminal domain C9I78_17360 PF01048 Phosphorylase superfamily C9I78_17365 PF00990 Diguanylate cyclase, GGDEF domain C9I78_17365 PF00563 EAL domain C9I78_17370 PF05025 RbsD / FucU transport protein family C9I78_17375 PF00005 ABC transporter C9I78_17380 PF02653 Branched-chain amino acid transport system / permease component C9I78_17385 PF13407 Periplasmic binding protein domain C9I78_17390 PF00294 pfkB family carbohydrate kinase C9I78_17395 PF00356 Bacterial regulatory proteins, lacI family C9I78_17405 PF04973 Nicotinamide mononucleotide transporter C9I78_17410 PF01048 Phosphorylase superfamily C9I78_17430 PF00072 Response regulator receiver domain C9I78_17430 PF00486 Transcriptional regulatory protein, C terminal C9I78_17445 PF00245 Alkaline phosphatase C9I78_17455 PF00082 Subtilase family C9I78_17455 PF01483 Proprotein convertase P-domain C9I78_17465 PF00990 Diguanylate cyclase, GGDEF domain C9I78_17465 PF00072 Response regulator receiver domain C9I78_17475 PF03222 Tryptophan/tyrosine permease family C9I78_17480 PF00583 Acetyltransferase (GNAT) family C9I78_17485 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C9I78_17485 PF00384 Molybdopterin oxidoreductase C9I78_17485 PF01568 Molydopterin dinucleotide binding domain C9I78_17490 PF14824 Sirohaem biosynthesis protein central C9I78_17490 PF10414 Sirohaem synthase dimerisation region C9I78_17490 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C9I78_17495 PF00591 Glycosyl transferase family, a/b domain C9I78_17495 PF02885 Glycosyl transferase family, helical bundle domain C9I78_17505 PF01738 Dienelactone hydrolase family C9I78_17510 PF03861 ANTAR domain C9I78_17510 PF08376 Nitrate and nitrite sensing C9I78_17520 PF00005 ABC transporter C9I78_17525 PF00528 Binding-protein-dependent transport system inner membrane component C9I78_17530 PF00005 ABC transporter C9I78_17535 PF04324 BFD-like [2Fe-2S] binding domain C9I78_17535 PF07992 Pyridine nucleotide-disulphide oxidoreductase C9I78_17535 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C9I78_17535 PF13806 Rieske-like [2Fe-2S] domain C9I78_17535 PF18267 Rubredoxin NAD+ reductase C-terminal domain C9I78_17535 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C9I78_17550 PF08361 MAATS-type transcriptional repressor, C-terminal region C9I78_17550 PF00440 Bacterial regulatory proteins, tetR family C9I78_17565 PF00211 Adenylate and Guanylate cyclase catalytic domain C9I78_17565 PF00072 Response regulator receiver domain C9I78_17590 PF03793 PASTA domain C9I78_17590 PF00069 Protein kinase domain C9I78_17615 PF13677 Membrane MotB of proton-channel complex MotA/MotB C9I78_17615 PF00691 OmpA family C9I78_17675 PF07724 AAA domain (Cdc48 subfamily) C9I78_17675 PF00004 ATPase family associated with various cellular activities (AAA) C9I78_17675 PF17871 AAA lid domain C9I78_17675 PF10431 C-terminal, D2-small domain, of ClpB protein C9I78_17685 PF04717 Type VI secretion system, phage-baseplate injector C9I78_17685 PF16671 Actin cross-linking domain C9I78_17700 PF12320 Type 5 capsule protein repressor C-terminal domain C9I78_17700 PF00149 Calcineurin-like phosphoesterase C9I78_17705 PF13476 AAA domain C9I78_17725 PF08212 Lipocalin-like domain C9I78_17735 PF07690 Major Facilitator Superfamily C9I78_17745 PF03606 C4-dicarboxylate anaerobic carrier C9I78_17755 PF00034 Cytochrome c C9I78_17760 PF01212 Beta-eliminating lyase C9I78_17770 PF17868 AAA lid domain C9I78_17770 PF07728 AAA domain (dynein-related subfamily) C9I78_17770 PF12592 Protein of unknown function (DUF3763) C9I78_17775 PF05762 VWA domain containing CoxE-like protein C9I78_17795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_17795 PF03466 LysR substrate binding domain C9I78_17800 PF01565 FAD binding domain C9I78_17800 PF09330 D-lactate dehydrogenase, membrane binding C9I78_17820 PF00842 Alanine racemase, C-terminal domain C9I78_17820 PF01168 Alanine racemase, N-terminal domain C9I78_17825 PF00672 HAMP domain C9I78_17825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C9I78_17840 PF00128 Alpha amylase, catalytic domain C9I78_17840 PF09154 Domain of unknown function (DUF1939) C9I78_17860 PF06965 Na+/H+ antiporter 1 C9I78_17860 PF13462 Thioredoxin C9I78_17910 PF14760 Rnk N-terminus C9I78_17910 PF01272 Transcription elongation factor, GreA/GreB, C-term C9I78_17915 PF07992 Pyridine nucleotide-disulphide oxidoreductase C9I78_17915 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C9I78_17915 PF04324 BFD-like [2Fe-2S] binding domain C9I78_17915 PF18267 Rubredoxin NAD+ reductase C-terminal domain C9I78_17915 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C9I78_17920 PF13806 Rieske-like [2Fe-2S] domain C9I78_17925 PF01226 Formate/nitrite transporter C9I78_17930 PF10414 Sirohaem synthase dimerisation region C9I78_17930 PF14824 Sirohaem biosynthesis protein central C9I78_17930 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C9I78_17945 PF03605 Anaerobic c4-dicarboxylate membrane transporter C9I78_17960 PF07715 TonB-dependent Receptor Plug Domain C9I78_17960 PF00593 TonB dependent receptor C9I78_17975 PF11756 Nitrous oxide-stimulated promoter C9I78_17980 PF01554 MatE C9I78_17990 PF07690 Major Facilitator Superfamily C9I78_17995 PF00085 Thioredoxin C9I78_18000 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C9I78_18000 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C9I78_18020 PF01238 Phosphomannose isomerase type I C9I78_18025 PF07690 Major Facilitator Superfamily C9I78_18030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_18030 PF07730 Histidine kinase C9I78_18030 PF05231 MASE1 C9I78_18035 PF00072 Response regulator receiver domain C9I78_18035 PF00196 Bacterial regulatory proteins, luxR family C9I78_18040 PF07690 Major Facilitator Superfamily C9I78_18045 PF02634 FdhD/NarQ family C9I78_18050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_18050 PF03466 LysR substrate binding domain C9I78_18060 PF00384 Molybdopterin oxidoreductase C9I78_18065 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C9I78_18065 PF07992 Pyridine nucleotide-disulphide oxidoreductase C9I78_18085 PF13737 Transposase DDE domain C9I78_18110 PF00990 Diguanylate cyclase, GGDEF domain C9I78_18160 PF13438 Domain of unknown function (DUF4113) C9I78_18160 PF00817 impB/mucB/samB family C9I78_18160 PF11799 impB/mucB/samB family C-terminal domain C9I78_18160 PF11798 IMS family HHH motif C9I78_18165 PF00717 Peptidase S24-like C9I78_18205 PF13099 Domain of unknown function (DUF3944) C9I78_18205 PF03981 Ubiquinol-cytochrome C chaperone C9I78_18295 PF07804 HipA-like C-terminal domain C9I78_18295 PF13657 HipA N-terminal domain C9I78_18300 PF07992 Pyridine nucleotide-disulphide oxidoreductase C9I78_18300 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C9I78_18320 PF04143 Sulphur transport C9I78_18330 PF00873 AcrB/AcrD/AcrF family C9I78_18335 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C9I78_18350 PF03477 ATP cone domain C9I78_18350 PF13597 Anaerobic ribonucleoside-triphosphate reductase C9I78_18360 PF01554 MatE C9I78_18370 PF12833 Helix-turn-helix domain C9I78_18375 PF00155 Aminotransferase class I and II C9I78_18380 PF08443 RimK-like ATP-grasp domain C9I78_18380 PF18030 RimK PreATP-grasp domain C9I78_18390 PF04076 Bacterial OB fold (BOF) protein C9I78_18395 PF07685 CobB/CobQ-like glutamine amidotransferase domain C9I78_18405 PF00528 Binding-protein-dependent transport system inner membrane component C9I78_18410 PF00005 ABC transporter C9I78_18410 PF03459 TOBE domain C9I78_18420 PF01590 GAF domain C9I78_18420 PF00563 EAL domain C9I78_18420 PF00990 Diguanylate cyclase, GGDEF domain C9I78_18420 PF00360 Phytochrome region C9I78_18430 PF00072 Response regulator receiver domain C9I78_18430 PF00990 Diguanylate cyclase, GGDEF domain C9I78_18445 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C9I78_18445 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C9I78_18445 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch C9I78_18450 PF02233 NAD(P) transhydrogenase beta subunit C9I78_18460 PF00486 Transcriptional regulatory protein, C terminal C9I78_18460 PF00072 Response regulator receiver domain C9I78_18475 PF03701 Uncharacterised protein family (UPF0181) C9I78_18480 PF00582 Universal stress protein family C9I78_18490 PF03466 LysR substrate binding domain C9I78_18490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_18505 PF01253 Translation initiation factor SUI1 C9I78_18515 PF07478 D-ala D-ala ligase C-terminus C9I78_18515 PF01820 D-ala D-ala ligase N-terminus C9I78_18525 PF13607 Succinyl-CoA ligase like flavodoxin domain C9I78_18525 PF13380 CoA binding domain C9I78_18525 PF00583 Acetyltransferase (GNAT) family C9I78_18530 PF03466 LysR substrate binding domain C9I78_18530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_18535 PF00593 TonB dependent receptor C9I78_18535 PF04886 PT repeat C9I78_18535 PF07715 TonB-dependent Receptor Plug Domain C9I78_18545 PF16363 GDP-mannose 4,6 dehydratase C9I78_18550 PF00990 Diguanylate cyclase, GGDEF domain C9I78_18550 PF05231 MASE1 C9I78_18550 PF08448 PAS fold C9I78_18550 PF08447 PAS fold C9I78_18550 PF13426 PAS domain C9I78_18550 PF00563 EAL domain C9I78_18555 PF03746 LamB/YcsF family C9I78_18560 PF02682 Carboxyltransferase domain, subdomain C and D C9I78_18565 PF02626 Carboxyltransferase domain, subdomain A and B C9I78_18580 PF00005 ABC transporter C9I78_18585 PF13472 GDSL-like Lipase/Acylhydrolase family C9I78_18590 PF12241 Trans-2-enoyl-CoA reductase catalytic region C9I78_18590 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase C9I78_18590 PF07055 Enoyl reductase FAD binding domain C9I78_18595 PF03707 Bacterial signalling protein N terminal repeat C9I78_18595 PF00990 Diguanylate cyclase, GGDEF domain C9I78_18595 PF00563 EAL domain C9I78_18595 PF13188 PAS domain C9I78_18605 PF00226 DnaJ domain C9I78_18605 PF00684 DnaJ central domain C9I78_18605 PF01556 DnaJ C terminal domain C9I78_18630 PF12793 Sugar transport-related sRNA regulator N-term C9I78_18630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C9I78_18640 PF03061 Thioesterase superfamily C9I78_18655 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) C9I78_18660 PF12262 Bacterial virulence factor lipase N-terminal C9I78_18675 PF03741 Integral membrane protein TerC family C9I78_18680 PF00149 Calcineurin-like phosphoesterase C9I78_18680 PF02872 5'-nucleotidase, C-terminal domain C9I78_18685 PF11398 Protein of unknown function (DUF2813) C9I78_18690 PF06496 Protein of unknown function (DUF1097) C9I78_18695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_18695 PF03466 LysR substrate binding domain C9I78_18700 PF01226 Formate/nitrite transporter C9I78_18705 PF04264 YceI-like domain C9I78_18710 PF01292 Prokaryotic cytochrome b561 C9I78_18725 PF12792 CSS motif domain associated with EAL C9I78_18725 PF00563 EAL domain C9I78_18730 PF00271 Helicase conserved C-terminal domain C9I78_18730 PF00270 DEAD/DEAH box helicase C9I78_18735 PF04336 Acyl carrier protein phosphodiesterase C9I78_18745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C9I78_18755 PF13419 Haloacid dehalogenase-like hydrolase C9I78_18765 PF11849 Domain of unknown function (DUF3369) C9I78_18785 PF00294 pfkB family carbohydrate kinase C9I78_18790 PF01268 Formate--tetrahydrofolate ligase C9I78_18795 PF00483 Nucleotidyl transferase C9I78_18800 PF06483 Chitinase C C9I78_18800 PF00704 Glycosyl hydrolases family 18 C9I78_18810 PF12833 Helix-turn-helix domain C9I78_18810 PF06719 AraC-type transcriptional regulator N-terminus C9I78_18815 PF00465 Iron-containing alcohol dehydrogenase C9I78_18825 PF00072 Response regulator receiver domain C9I78_18825 PF14532 Sigma-54 interaction domain C9I78_18825 PF02954 Bacterial regulatory protein, Fis family C9I78_18830 PF00512 His Kinase A (phospho-acceptor) domain C9I78_18830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_18830 PF00672 HAMP domain C9I78_18840 PF07690 Major Facilitator Superfamily C9I78_18845 PF02887 Pyruvate kinase, alpha/beta domain C9I78_18845 PF00224 Pyruvate kinase, barrel domain C9I78_18850 PF00005 ABC transporter C9I78_18855 PF00528 Binding-protein-dependent transport system inner membrane component C9I78_18860 PF00497 Bacterial extracellular solute-binding proteins, family 3 C9I78_18865 PF00528 Binding-protein-dependent transport system inner membrane component C9I78_18870 PF00563 EAL domain C9I78_18870 PF01590 GAF domain C9I78_18870 PF00989 PAS fold C9I78_18870 PF00990 Diguanylate cyclase, GGDEF domain C9I78_18890 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C9I78_18890 PF00356 Bacterial regulatory proteins, lacI family C9I78_18895 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C9I78_18895 PF00381 PTS HPr component phosphorylation site C9I78_18900 PF00294 pfkB family carbohydrate kinase C9I78_18905 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C9I78_18905 PF02378 Phosphotransferase system, EIIC C9I78_18915 PF00873 AcrB/AcrD/AcrF family C9I78_18935 PF01571 Aminomethyltransferase folate-binding domain C9I78_18935 PF08669 Glycine cleavage T-protein C-terminal barrel domain C9I78_18945 PF00464 Serine hydroxymethyltransferase C9I78_18950 PF01597 Glycine cleavage H-protein C9I78_18955 PF02347 Glycine cleavage system P-protein C9I78_18995 PF01212 Beta-eliminating lyase C9I78_19000 PF17848 Acetyl-coA carboxylase zinc finger domain C9I78_19000 PF01039 Carboxyl transferase domain C9I78_19005 PF03466 LysR substrate binding domain C9I78_19005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_19010 PF11490 DNA polymerase III polC-type N-terminus II C9I78_19010 PF07733 Bacterial DNA polymerase III alpha NTPase domain C9I78_19010 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C9I78_19010 PF14579 Helix-hairpin-helix motif C9I78_19010 PF02811 PHP domain C9I78_19010 PF00929 Exonuclease C9I78_19015 PF00005 ABC transporter C9I78_19015 PF00664 ABC transporter transmembrane region C9I78_19035 PF02253 Phospholipase A1 C9I78_19050 PF00376 MerR family regulatory protein C9I78_19050 PF09278 MerR, DNA binding C9I78_19055 PF01327 Polypeptide deformylase C9I78_19085 PF01769 Divalent cation transporter C9I78_19085 PF03448 MgtE intracellular N domain C9I78_19085 PF00571 CBS domain C9I78_19105 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C9I78_19110 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C9I78_19120 PF01757 Acyltransferase family C9I78_19135 PF00141 Peroxidase C9I78_19145 PF01645 Conserved region in glutamate synthase C9I78_19145 PF13187 4Fe-4S dicluster domain C9I78_19155 PF12431 Transcriptional regulator C9I78_19155 PF00072 Response regulator receiver domain C9I78_19160 PF17203 Single cache domain 3 C9I78_19160 PF00989 PAS fold C9I78_19160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_19160 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain C9I78_19165 PF00939 Sodium:sulfate symporter transmembrane region C9I78_19170 PF00171 Aldehyde dehydrogenase family C9I78_19190 PF00892 EamA-like transporter family C9I78_19195 PF00893 Small Multidrug Resistance protein C9I78_19200 PF07504 Fungalysin/Thermolysin Propeptide Motif C9I78_19200 PF03413 Peptidase propeptide and YPEB domain C9I78_19200 PF01447 Thermolysin metallopeptidase, catalytic domain C9I78_19200 PF04151 Bacterial pre-peptidase C-terminal domain C9I78_19200 PF02868 Thermolysin metallopeptidase, alpha-helical domain C9I78_19210 PF01569 PAP2 superfamily C9I78_19225 PF00892 EamA-like transporter family C9I78_19245 PF00072 Response regulator receiver domain C9I78_19245 PF01584 CheW-like domain C9I78_19270 PF00196 Bacterial regulatory proteins, luxR family C9I78_19270 PF00072 Response regulator receiver domain C9I78_19280 PF00990 Diguanylate cyclase, GGDEF domain C9I78_19285 PF00072 Response regulator receiver domain C9I78_19285 PF00196 Bacterial regulatory proteins, luxR family C9I78_19290 PF00990 Diguanylate cyclase, GGDEF domain C9I78_19290 PF03707 Bacterial signalling protein N terminal repeat C9I78_19290 PF13188 PAS domain C9I78_19290 PF00563 EAL domain C9I78_19295 PF00512 His Kinase A (phospho-acceptor) domain C9I78_19295 PF00072 Response regulator receiver domain C9I78_19295 PF09456 RcsC Alpha-Beta-Loop (ABL) C9I78_19295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_19315 PF00691 OmpA family C9I78_19315 PF05736 OprF membrane domain C9I78_19350 PF00437 Type II/IV secretion system protein C9I78_19365 PF13629 Pilus formation protein N terminal region C9I78_19365 PF04972 BON domain C9I78_19365 PF00263 Bacterial type II and III secretion system protein C9I78_19385 PF03466 LysR substrate binding domain C9I78_19385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_19390 PF12833 Helix-turn-helix domain C9I78_19400 PF08453 Peptidase family M9 N-terminal C9I78_19400 PF04151 Bacterial pre-peptidase C-terminal domain C9I78_19400 PF01752 Collagenase C9I78_19410 PF01926 50S ribosome-binding GTPase C9I78_19415 PF00155 Aminotransferase class I and II C9I78_19420 PF00072 Response regulator receiver domain C9I78_19420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_19440 PF03606 C4-dicarboxylate anaerobic carrier C9I78_19445 PF04011 LemA family C9I78_19450 PF01435 Peptidase family M48 C9I78_19470 PF18081 Fanconi anemia-associated nuclease SAP domain C9I78_19470 PF08774 VRR-NUC domain C9I78_19480 PF04055 Radical SAM superfamily C9I78_19480 PF13186 Iron-sulfur cluster-binding domain C9I78_19500 PF04076 Bacterial OB fold (BOF) protein C9I78_19505 PF00781 Diacylglycerol kinase catalytic domain C9I78_19510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_19510 PF03466 LysR substrate binding domain C9I78_19515 PF01872 RibD C-terminal domain C9I78_19515 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C9I78_19530 PF00092 von Willebrand factor type A domain C9I78_19545 PF17863 AAA lid domain C9I78_19545 PF07726 ATPase family associated with various cellular activities (AAA) C9I78_19550 PF13186 Iron-sulfur cluster-binding domain C9I78_19550 PF04055 Radical SAM superfamily C9I78_19555 PF00884 Sulfatase C9I78_19560 PF03466 LysR substrate binding domain C9I78_19560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_19570 PF00884 Sulfatase C9I78_19575 PF00884 Sulfatase C9I78_19580 PF00072 Response regulator receiver domain C9I78_19580 PF00486 Transcriptional regulatory protein, C terminal C9I78_19595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_19595 PF00512 His Kinase A (phospho-acceptor) domain C9I78_19595 PF00672 HAMP domain C9I78_19595 PF01627 Hpt domain C9I78_19595 PF00072 Response regulator receiver domain C9I78_19600 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C9I78_19605 PF02142 MGS-like domain C9I78_19610 PF00580 UvrD/REP helicase N-terminal domain C9I78_19610 PF12462 DNA helicase IV / RNA helicase N terminal C9I78_19610 PF13361 UvrD-like helicase C-terminal domain C9I78_19615 PF12805 FUSC-like inner membrane protein yccS C9I78_19650 PF00593 TonB dependent receptor C9I78_19650 PF07715 TonB-dependent Receptor Plug Domain C9I78_19665 PF13411 MerR HTH family regulatory protein C9I78_19670 PF00005 ABC transporter C9I78_19675 PF01032 FecCD transport family C9I78_19680 PF01032 FecCD transport family C9I78_19685 PF01497 Periplasmic binding protein C9I78_19710 PF04314 Copper chaperone PCu(A)C C9I78_19715 PF00012 Hsp70 protein C9I78_19730 PF00676 Dehydrogenase E1 component C9I78_19735 PF02779 Transketolase, pyrimidine binding domain C9I78_19735 PF02780 Transketolase, C-terminal domain C9I78_19740 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C9I78_19740 PF02817 e3 binding domain C9I78_19740 PF00364 Biotin-requiring enzyme C9I78_19750 PF02798 Glutathione S-transferase, N-terminal domain C9I78_19750 PF00043 Glutathione S-transferase, C-terminal domain C9I78_19755 PF03466 LysR substrate binding domain C9I78_19755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_19765 PF00528 Binding-protein-dependent transport system inner membrane component C9I78_19770 PF00528 Binding-protein-dependent transport system inner membrane component C9I78_19775 PF00497 Bacterial extracellular solute-binding proteins, family 3 C9I78_19780 PF00005 ABC transporter C9I78_19785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_19785 PF03466 LysR substrate binding domain C9I78_19800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_19800 PF03466 LysR substrate binding domain C9I78_19805 PF08031 Berberine and berberine like C9I78_19805 PF01565 FAD binding domain C9I78_19810 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C9I78_19815 PF01040 UbiA prenyltransferase family C9I78_19825 PF00510 Cytochrome c oxidase subunit III C9I78_19830 PF00115 Cytochrome C and Quinol oxidase polypeptide I C9I78_19835 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C9I78_19835 PF06481 COX Aromatic Rich Motif C9I78_19845 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C9I78_19845 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C9I78_19850 PF00378 Enoyl-CoA hydratase/isomerase C9I78_19865 PF00171 Aldehyde dehydrogenase family C9I78_19870 PF00108 Thiolase, N-terminal domain C9I78_19870 PF02803 Thiolase, C-terminal domain C9I78_19875 PF00376 MerR family regulatory protein C9I78_19875 PF09278 MerR, DNA binding C9I78_19880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C9I78_19880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C9I78_19880 PF02770 Acyl-CoA dehydrogenase, middle domain C9I78_19885 PF01039 Carboxyl transferase domain C9I78_19890 PF00378 Enoyl-CoA hydratase/isomerase C9I78_19895 PF00682 HMGL-like C9I78_19900 PF10063 Uncharacterized integral membrane protein (DUF2301) C9I78_19910 PF13426 PAS domain C9I78_19910 PF08447 PAS fold C9I78_19910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C9I78_19915 PF00871 Acetokinase family C9I78_19925 PF13426 PAS domain C9I78_19925 PF00563 EAL domain C9I78_19925 PF00990 Diguanylate cyclase, GGDEF domain C9I78_19930 PF00270 DEAD/DEAH box helicase C9I78_19930 PF03880 DbpA RNA binding domain C9I78_19930 PF00271 Helicase conserved C-terminal domain C9I78_19935 PF08206 Ribonuclease B OB domain C9I78_19935 PF00575 S1 RNA binding domain C9I78_19935 PF00773 RNB domain C9I78_19940 PF12833 Helix-turn-helix domain C9I78_19950 PF12849 PBP superfamily domain C9I78_19970 PF00672 HAMP domain C9I78_19970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C9I78_19970 PF12729 Four helix bundle sensory module for signal transduction C9I78_19975 PF00005 ABC transporter C9I78_19980 PF12792 CSS motif domain associated with EAL C9I78_19980 PF00563 EAL domain C9I78_20000 PF00270 DEAD/DEAH box helicase C9I78_20000 PF00271 Helicase conserved C-terminal domain C9I78_20005 PF07683 Cobalamin synthesis protein cobW C-terminal domain C9I78_20005 PF02492 CobW/HypB/UreG, nucleotide-binding domain C9I78_20015 PF01470 Pyroglutamyl peptidase C9I78_20025 PF00291 Pyridoxal-phosphate dependent enzyme C9I78_20030 PF09905 DNA-binding protein VF530 C9I78_20035 PF00270 DEAD/DEAH box helicase C9I78_20035 PF00271 Helicase conserved C-terminal domain C9I78_20040 PF12843 Putative quorum-sensing-regulated virulence factor C9I78_20065 PF01329 Pterin 4 alpha carbinolamine dehydratase C9I78_20070 PF00351 Biopterin-dependent aromatic amino acid hydroxylase C9I78_20075 PF00501 AMP-binding enzyme C9I78_20075 PF13193 AMP-binding enzyme C-terminal domain C9I78_20085 PF03466 LysR substrate binding domain C9I78_20085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_20105 PF00892 EamA-like transporter family C9I78_20120 PF00465 Iron-containing alcohol dehydrogenase C9I78_20125 PF07995 Glucose / Sorbosone dehydrogenase C9I78_20135 PF00210 Ferritin-like domain C9I78_20140 PF00672 HAMP domain C9I78_20140 PF17200 Single Cache domain 2 C9I78_20140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C9I78_20150 PF00005 ABC transporter C9I78_20150 PF02687 FtsX-like permease family C9I78_20150 PF12704 MacB-like periplasmic core domain C9I78_20155 PF02687 FtsX-like permease family C9I78_20155 PF00005 ABC transporter C9I78_20155 PF12704 MacB-like periplasmic core domain C9I78_20170 PF00990 Diguanylate cyclase, GGDEF domain C9I78_20180 PF13426 PAS domain C9I78_20180 PF08447 PAS fold C9I78_20180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C9I78_20185 PF03889 Alternative ribosome-rescue factor A C9I78_20190 PF00313 'Cold-shock' DNA-binding domain C9I78_20225 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C9I78_20225 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C9I78_20230 PF01040 UbiA prenyltransferase family C9I78_20235 PF02628 Cytochrome oxidase assembly protein C9I78_20255 PF00510 Cytochrome c oxidase subunit III C9I78_20260 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 C9I78_20265 PF00115 Cytochrome C and Quinol oxidase polypeptide I C9I78_20270 PF02790 Cytochrome C oxidase subunit II, transmembrane domain C9I78_20270 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C9I78_20275 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C9I78_20275 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C9I78_20275 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C9I78_20275 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C9I78_20285 PF01810 LysE type translocator C9I78_20290 PF12833 Helix-turn-helix domain C9I78_20305 PF01557 Fumarylacetoacetate (FAA) hydrolase family C9I78_20320 PF00892 EamA-like transporter family C9I78_20325 PF00462 Glutaredoxin C9I78_20345 PF07690 Major Facilitator Superfamily C9I78_20350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_20350 PF03466 LysR substrate binding domain C9I78_20355 PF00990 Diguanylate cyclase, GGDEF domain C9I78_20355 PF08448 PAS fold C9I78_20355 PF08447 PAS fold C9I78_20355 PF00563 EAL domain C9I78_20360 PF01551 Peptidase family M23 C9I78_20360 PF01476 LysM domain C9I78_20360 PF08525 Opacity-associated protein A N-terminal motif C9I78_20390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C9I78_20390 PF00672 HAMP domain C9I78_20390 PF02743 Cache domain C9I78_20400 PF03222 Tryptophan/tyrosine permease family C9I78_20435 PF00107 Zinc-binding dehydrogenase C9I78_20435 PF08240 Alcohol dehydrogenase GroES-like domain C9I78_20440 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C9I78_20440 PF02378 Phosphotransferase system, EIIC C9I78_20445 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C9I78_20465 PF01758 Sodium Bile acid symporter family C9I78_20475 PF01161 Phosphatidylethanolamine-binding protein C9I78_20480 PF02567 Phenazine biosynthesis-like protein C9I78_20485 PF10282 Lactonase, 7-bladed beta-propeller C9I78_20490 PF13737 Transposase DDE domain C9I78_20500 PF17200 Single Cache domain 2 C9I78_20500 PF00672 HAMP domain C9I78_20500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C9I78_20510 PF00005 ABC transporter C9I78_20530 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C9I78_20530 PF12838 4Fe-4S dicluster domain C9I78_20530 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C9I78_20530 PF00384 Molybdopterin oxidoreductase C9I78_20530 PF01568 Molydopterin dinucleotide binding domain C9I78_20555 PF00873 AcrB/AcrD/AcrF family C9I78_20575 PF13185 GAF domain C9I78_20575 PF00990 Diguanylate cyclase, GGDEF domain C9I78_20585 PF13302 Acetyltransferase (GNAT) domain C9I78_20595 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) C9I78_20600 PF00873 AcrB/AcrD/AcrF family C9I78_20605 PF13533 Biotin-lipoyl like C9I78_20620 PF00005 ABC transporter C9I78_20620 PF16326 ABC transporter C-terminal domain C9I78_20620 PF12848 ABC transporter C9I78_20625 PF00582 Universal stress protein family C9I78_20630 PF02525 Flavodoxin-like fold C9I78_20635 PF02254 TrkA-N domain C9I78_20635 PF00999 Sodium/hydrogen exchanger family C9I78_20650 PF00128 Alpha amylase, catalytic domain C9I78_20660 PF01752 Collagenase C9I78_20660 PF08453 Peptidase family M9 N-terminal C9I78_20660 PF04151 Bacterial pre-peptidase C-terminal domain C9I78_20675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_20675 PF03466 LysR substrate binding domain C9I78_20685 PF00210 Ferritin-like domain C9I78_20690 PF00141 Peroxidase C9I78_20710 PF00082 Subtilase family C9I78_20715 PF13091 PLD-like domain C9I78_20715 PF13087 AAA domain C9I78_20735 PF00072 Response regulator receiver domain C9I78_20735 PF01584 CheW-like domain C9I78_20745 PF01243 Pyridoxamine 5'-phosphate oxidase C9I78_20750 PF06228 Haem utilisation ChuX/HutX C9I78_20755 PF04055 Radical SAM superfamily C9I78_20760 PF03544 Gram-negative bacterial TonB protein C-terminal C9I78_20765 PF01618 MotA/TolQ/ExbB proton channel family C9I78_20770 PF02472 Biopolymer transport protein ExbD/TolR C9I78_20780 PF01032 FecCD transport family C9I78_20785 PF00005 ABC transporter C9I78_20830 PF01467 Cytidylyltransferase-like C9I78_20835 PF02540 NAD synthase C9I78_20840 PF03473 MOSC domain C9I78_20840 PF00111 2Fe-2S iron-sulfur cluster binding domain C9I78_20840 PF03476 MOSC N-terminal beta barrel domain C9I78_20840 PF03473 MOSC domain C9I78_20840 PF03476 MOSC N-terminal beta barrel domain C9I78_20840 PF00111 2Fe-2S iron-sulfur cluster binding domain C9I78_20850 PF01679 Proteolipid membrane potential modulator C9I78_20860 PF01979 Amidohydrolase family C9I78_20865 PF05661 Protein of unknown function (DUF808) C9I78_20895 PF01497 Periplasmic binding protein C9I78_20895 PF12833 Helix-turn-helix domain C9I78_20900 PF00155 Aminotransferase class I and II C9I78_20930 PF00535 Glycosyl transferase family 2 C9I78_20945 PF00271 Helicase conserved C-terminal domain C9I78_20945 PF00270 DEAD/DEAH box helicase C9I78_20955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_20955 PF03466 LysR substrate binding domain C9I78_20960 PF03466 LysR substrate binding domain C9I78_20960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_20970 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C9I78_20975 PF08240 Alcohol dehydrogenase GroES-like domain C9I78_20975 PF00107 Zinc-binding dehydrogenase C9I78_20990 PF12833 Helix-turn-helix domain C9I78_20990 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term C9I78_21000 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) C9I78_21020 PF03466 LysR substrate binding domain C9I78_21020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_21030 PF17763 Glutaminase/Asparaginase C-terminal domain C9I78_21030 PF00710 Asparaginase, N-terminal C9I78_21035 PF03618 Kinase/pyrophosphorylase C9I78_21040 PF00391 PEP-utilising enzyme, mobile domain C9I78_21040 PF02896 PEP-utilising enzyme, TIM barrel domain C9I78_21040 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain C9I78_21060 PF00579 tRNA synthetases class I (W and Y) C9I78_21065 PF13416 Bacterial extracellular solute-binding protein C9I78_21075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_21075 PF03466 LysR substrate binding domain C9I78_21080 PF13533 Biotin-lipoyl like C9I78_21085 PF00873 AcrB/AcrD/AcrF family C9I78_21100 PF07694 5TMR of 5TMR-LYT C9I78_21100 PF00990 Diguanylate cyclase, GGDEF domain C9I78_21110 PF00196 Bacterial regulatory proteins, luxR family C9I78_21115 PF02836 Glycosyl hydrolases family 2, TIM barrel domain C9I78_21115 PF00703 Glycosyl hydrolases family 2 C9I78_21115 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 C9I78_21115 PF02837 Glycosyl hydrolases family 2, sugar binding domain C9I78_21120 PF02028 BCCT, betaine/carnitine/choline family transporter C9I78_21125 PF00392 Bacterial regulatory proteins, gntR family C9I78_21125 PF07702 UTRA domain C9I78_21150 PF00005 ABC transporter C9I78_21150 PF08402 TOBE domain C9I78_21180 PF00873 AcrB/AcrD/AcrF family C9I78_21185 PF13533 Biotin-lipoyl like C9I78_21195 PF13091 PLD-like domain C9I78_21225 PF00376 MerR family regulatory protein C9I78_21225 PF09278 MerR, DNA binding C9I78_21245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_21245 PF03466 LysR substrate binding domain C9I78_21255 PF13378 Enolase C-terminal domain-like C9I78_21255 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C9I78_21265 PF14492 Elongation Factor G, domain II C9I78_21265 PF00679 Elongation factor G C-terminus C9I78_21265 PF00009 Elongation factor Tu GTP binding domain C9I78_21265 PF03144 Elongation factor Tu domain 2 C9I78_21265 PF03764 Elongation factor G, domain IV C9I78_21290 PF02001 Protein of unknown function DUF134 C9I78_21300 PF17185 NlpE C-terminal OB domain C9I78_21300 PF04170 NlpE N-terminal domain C9I78_21310 PF06629 MltA-interacting protein MipA C9I78_21320 PF01389 OmpA-like transmembrane domain C9I78_21320 PF00691 OmpA family C9I78_21325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_21325 PF03466 LysR substrate binding domain C9I78_21350 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family C9I78_21350 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain C9I78_21360 PF00857 Isochorismatase family C9I78_21370 PF06628 Catalase-related immune-responsive C9I78_21370 PF00199 Catalase C9I78_21380 PF00455 DeoR C terminal sensor domain C9I78_21380 PF08220 DeoR-like helix-turn-helix domain C9I78_21385 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C9I78_21390 PF01641 SelR domain C9I78_21390 PF01625 Peptide methionine sulfoxide reductase C9I78_21410 PF07971 Glycosyl hydrolase family 92 C9I78_21410 PF17678 Glycosyl hydrolase family 92 N-terminal domain C9I78_21415 PF07971 Glycosyl hydrolase family 92 C9I78_21415 PF17678 Glycosyl hydrolase family 92 N-terminal domain C9I78_21425 PF17678 Glycosyl hydrolase family 92 N-terminal domain C9I78_21425 PF07971 Glycosyl hydrolase family 92 C9I78_21430 PF17678 Glycosyl hydrolase family 92 N-terminal domain C9I78_21430 PF07971 Glycosyl hydrolase family 92 C9I78_21435 PF03060 Nitronate monooxygenase C9I78_21440 PF02872 5'-nucleotidase, C-terminal domain C9I78_21440 PF00149 Calcineurin-like phosphoesterase C9I78_21450 PF00440 Bacterial regulatory proteins, tetR family C9I78_21450 PF08359 YsiA-like protein, C-terminal region C9I78_21465 PF03466 LysR substrate binding domain C9I78_21465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_21470 PF01810 LysE type translocator C9I78_21485 PF00118 TCP-1/cpn60 chaperonin family C9I78_21490 PF00166 Chaperonin 10 Kd subunit C9I78_21495 PF00581 Rhodanese-like domain C9I78_21520 PF01070 FMN-dependent dehydrogenase C9I78_21540 PF00669 Bacterial flagellin N-terminal helical region C9I78_21550 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase C9I78_21550 PF10135 Rod binding protein C9I78_21555 PF02119 Flagellar P-ring protein C9I78_21560 PF02107 Flagellar L-ring protein C9I78_21565 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C9I78_21565 PF00460 Flagella basal body rod protein C9I78_21570 PF00460 Flagella basal body rod protein C9I78_21570 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C9I78_21575 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C9I78_21575 PF07559 Flagellar basal body protein FlaE C9I78_21575 PF00460 Flagella basal body rod protein C9I78_21580 PF13860 FlgD Ig-like domain C9I78_21580 PF03963 Flagellar hook capping protein - N-terminal region C9I78_21580 PF13861 FlgD Tudor-like domain C9I78_21585 PF00460 Flagella basal body rod protein C9I78_21585 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C9I78_21590 PF00460 Flagella basal body rod protein C9I78_21610 PF01464 Transglycosylase SLT domain C9I78_21615 PF08264 Anticodon-binding domain of tRNA C9I78_21615 PF00133 tRNA synthetases class I (I, L, M and V) C9I78_21635 PF03313 Serine dehydratase alpha chain C9I78_21635 PF03315 Serine dehydratase beta chain C9I78_21640 PF00854 POT family C9I78_21650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_21650 PF03466 LysR substrate binding domain C9I78_21660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_21660 PF03466 LysR substrate binding domain C9I78_21665 PF00691 OmpA family C9I78_21665 PF01389 OmpA-like transmembrane domain C9I78_21675 PF18027 Cytosolic carboxypeptidase N-terminal domain C9I78_21675 PF00246 Zinc carboxypeptidase C9I78_21680 PF01266 FAD dependent oxidoreductase C9I78_21690 PF04393 Protein of unknown function (DUF535) C9I78_21705 PF00392 Bacterial regulatory proteins, gntR family C9I78_21705 PF07702 UTRA domain C9I78_21710 PF00528 Binding-protein-dependent transport system inner membrane component C9I78_21715 PF00005 ABC transporter C9I78_21730 PF00266 Aminotransferase class-V C9I78_21740 PF13419 Haloacid dehalogenase-like hydrolase C9I78_21745 PF00356 Bacterial regulatory proteins, lacI family C9I78_21750 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C9I78_21760 PF03611 PTS system sugar-specific permease component C9I78_21775 PF00657 GDSL-like Lipase/Acylhydrolase C9I78_21780 PF02321 Outer membrane efflux protein C9I78_21785 PF12704 MacB-like periplasmic core domain C9I78_21785 PF00005 ABC transporter C9I78_21785 PF02687 FtsX-like permease family C9I78_21790 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C9I78_21795 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) C9I78_21800 PF00194 Eukaryotic-type carbonic anhydrase C9I78_21805 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) C9I78_21820 PF13419 Haloacid dehalogenase-like hydrolase C9I78_21825 PF03466 LysR substrate binding domain C9I78_21825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_21860 PF14602 Hexapeptide repeat of succinyl-transferase C9I78_21860 PF12464 Maltose acetyltransferase C9I78_21865 PF02566 OsmC-like protein C9I78_21870 PF01641 SelR domain C9I78_21870 PF01625 Peptide methionine sulfoxide reductase C9I78_21885 PF04244 Deoxyribodipyrimidine photo-lyase-related protein C9I78_21890 PF00875 DNA photolyase C9I78_21890 PF03441 FAD binding domain of DNA photolyase C9I78_21895 PF00990 Diguanylate cyclase, GGDEF domain C9I78_21910 PF12729 Four helix bundle sensory module for signal transduction C9I78_21910 PF00672 HAMP domain C9I78_21910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C9I78_21915 PF00990 Diguanylate cyclase, GGDEF domain C9I78_21915 PF05230 MASE2 domain C9I78_21920 PF13532 2OG-Fe(II) oxygenase superfamily C9I78_21930 PF07670 Nucleoside recognition C9I78_21930 PF07662 Na+ dependent nucleoside transporter C-terminus C9I78_21930 PF01773 Na+ dependent nucleoside transporter N-terminus C9I78_21950 PF01212 Beta-eliminating lyase C9I78_21960 PF01266 FAD dependent oxidoreductase C9I78_21985 PF05525 Branched-chain amino acid transport protein C9I78_21990 PF05230 MASE2 domain C9I78_21990 PF00990 Diguanylate cyclase, GGDEF domain C9I78_21995 PF02954 Bacterial regulatory protein, Fis family C9I78_21995 PF00072 Response regulator receiver domain C9I78_21995 PF00158 Sigma-54 interaction domain C9I78_22000 PF00512 His Kinase A (phospho-acceptor) domain C9I78_22000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_22010 PF00232 Glycosyl hydrolase family 1 C9I78_22035 PF03466 LysR substrate binding domain C9I78_22035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_22045 PF08443 RimK-like ATP-grasp domain C9I78_22045 PF18030 RimK PreATP-grasp domain C9I78_22050 PF08443 RimK-like ATP-grasp domain C9I78_22050 PF18030 RimK PreATP-grasp domain C9I78_22055 PF00753 Metallo-beta-lactamase superfamily C9I78_22060 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C9I78_22060 PF17944 Arginine decarboxylase C-terminal helical extension C9I78_22060 PF17810 Arginine decarboxylase helical bundle domain C9I78_22065 PF00491 Arginase family C9I78_22070 PF07690 Major Facilitator Superfamily C9I78_22075 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain C9I78_22075 PF00326 Prolyl oligopeptidase family C9I78_22090 PF00950 ABC 3 transport family C9I78_22095 PF00005 ABC transporter C9I78_22100 PF01297 Zinc-uptake complex component A periplasmic C9I78_22140 PF02472 Biopolymer transport protein ExbD/TolR C9I78_22145 PF01618 MotA/TolQ/ExbB proton channel family C9I78_22150 PF01618 MotA/TolQ/ExbB proton channel family C9I78_22160 PF07715 TonB-dependent Receptor Plug Domain C9I78_22160 PF00593 TonB dependent receptor C9I78_22165 PF16750 Sensor domain of 2-component histidine kinase C9I78_22165 PF00512 His Kinase A (phospho-acceptor) domain C9I78_22165 PF00672 HAMP domain C9I78_22165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_22170 PF00486 Transcriptional regulatory protein, C terminal C9I78_22170 PF00072 Response regulator receiver domain C9I78_22180 PF03009 Glycerophosphoryl diester phosphodiesterase family C9I78_22190 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C9I78_22190 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C9I78_22195 PF10928 Protein of unknown function (DUF2810) C9I78_22250 PF04013 Putative SAM-dependent RNA methyltransferase C9I78_22255 PF01523 Putative modulator of DNA gyrase C9I78_22270 PF08543 Phosphomethylpyrimidine kinase C9I78_22275 PF00005 ABC transporter C9I78_22280 PF00528 Binding-protein-dependent transport system inner membrane component C9I78_22285 PF09084 NMT1/THI5 like C9I78_22290 PF03070 TENA/THI-4/PQQC family C9I78_22295 PF02110 Hydroxyethylthiazole kinase family C9I78_22300 PF02581 Thiamine monophosphate synthase C9I78_22310 PF01568 Molydopterin dinucleotide binding domain C9I78_22310 PF00384 Molybdopterin oxidoreductase C9I78_22310 PF18364 Molybdopterin oxidoreductase N-terminal domain C9I78_22315 PF03264 NapC/NirT cytochrome c family, N-terminal region C9I78_22340 PF00583 Acetyltransferase (GNAT) family C9I78_22360 PF00392 Bacterial regulatory proteins, gntR family C9I78_22360 PF00155 Aminotransferase class I and II C9I78_22365 PF02595 Glycerate kinase family C9I78_22370 PF02447 GntP family permease C9I78_22375 PF13556 PucR C-terminal helix-turn-helix domain C9I78_22375 PF17853 GGDEF-like domain C9I78_22375 PF05651 Putative sugar diacid recognition C9I78_22400 PF13419 Haloacid dehalogenase-like hydrolase C9I78_22415 PF03466 LysR substrate binding domain C9I78_22415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_22425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_22425 PF03466 LysR substrate binding domain C9I78_22430 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C9I78_22435 PF01661 Macro domain C9I78_22440 PF01204 Trehalase C9I78_22450 PF12706 Beta-lactamase superfamily domain C9I78_22460 PF07690 Major Facilitator Superfamily C9I78_22465 PF13533 Biotin-lipoyl like C9I78_22470 PF03922 OmpW family C9I78_22475 PF13599 Pentapeptide repeats (9 copies) C9I78_22490 PF18416 N-acetylglucosamine binding protein domain 2 C9I78_22490 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading C9I78_22495 PF01037 Lrp/AsnC ligand binding domain C9I78_22500 PF01810 LysE type translocator C9I78_22505 PF08021 Siderophore-interacting FAD-binding domain C9I78_22505 PF04954 Siderophore-interacting protein C9I78_22510 PF14583 Oligogalacturonate lyase C9I78_22515 PF00474 Sodium:solute symporter family C9I78_22520 PF13229 Right handed beta helix region C9I78_22535 PF01081 KDPG and KHG aldolase C9I78_22540 PF00294 pfkB family carbohydrate kinase C9I78_22555 PF07883 Cupin domain C9I78_22560 PF10688 Bacterial inner membrane protein C9I78_22570 PF09339 IclR helix-turn-helix domain C9I78_22570 PF01614 Bacterial transcriptional regulator C9I78_22585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_22585 PF03466 LysR substrate binding domain C9I78_22590 PF00797 N-acetyltransferase C9I78_22595 PF00107 Zinc-binding dehydrogenase C9I78_22595 PF08240 Alcohol dehydrogenase GroES-like domain C9I78_22600 PF00756 Putative esterase C9I78_22610 PF00990 Diguanylate cyclase, GGDEF domain C9I78_22610 PF17152 Periplasmic sensor domain C9I78_22625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_22625 PF03466 LysR substrate binding domain C9I78_22640 PF00849 RNA pseudouridylate synthase C9I78_22645 PF01554 MatE C9I78_22655 PF00990 Diguanylate cyclase, GGDEF domain C9I78_22655 PF00563 EAL domain C9I78_22665 PF06865 Pyrimidine/purine nucleoside phosphorylase C9I78_22675 PF08329 Chitinase A, N-terminal domain C9I78_22675 PF00704 Glycosyl hydrolases family 18 C9I78_22695 PF03600 Citrate transporter C9I78_22705 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 C9I78_22715 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C9I78_22715 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C9I78_22720 PF00730 HhH-GPD superfamily base excision DNA repair protein C9I78_22720 PF06029 AlkA N-terminal domain C9I78_22735 PF07681 DoxX C9I78_22740 PF17954 Quercetinase C-terminal cupin domain C9I78_22740 PF02678 Pirin C9I78_22745 PF03466 LysR substrate binding domain C9I78_22745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_22760 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase C9I78_22775 PF03616 Sodium/glutamate symporter C9I78_22780 PF00155 Aminotransferase class I and II C9I78_22780 PF00392 Bacterial regulatory proteins, gntR family C9I78_22785 PF00005 ABC transporter C9I78_22795 PF03616 Sodium/glutamate symporter C9I78_22810 PF00132 Bacterial transferase hexapeptide (six repeats) C9I78_22825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C9I78_22825 PF17200 Single Cache domain 2 C9I78_22825 PF00672 HAMP domain C9I78_22830 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C9I78_22840 PF00072 Response regulator receiver domain C9I78_22840 PF04397 LytTr DNA-binding domain C9I78_22845 PF06580 Histidine kinase C9I78_22845 PF07694 5TMR of 5TMR-LYT C9I78_22845 PF13492 GAF domain C9I78_22845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_22865 PF00005 ABC transporter C9I78_22880 PF01098 Cell cycle protein C9I78_22885 PF01709 Transcriptional regulator C9I78_22895 PF00512 His Kinase A (phospho-acceptor) domain C9I78_22895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_22895 PF00672 HAMP domain C9I78_22895 PF17149 Periplasmic sensor domain found in signal transduction proteins C9I78_22895 PF00072 Response regulator receiver domain C9I78_22895 PF01627 Hpt domain C9I78_22910 PF00925 GTP cyclohydrolase II C9I78_22910 PF08719 Domain of unknown function (DUF1768) C9I78_22920 PF00005 ABC transporter C9I78_22920 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C9I78_22925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C9I78_22925 PF00005 ABC transporter C9I78_22945 PF18607 ParA helix turn helix domain C9I78_22945 PF13614 AAA domain C9I78_22950 PF08775 ParB family C9I78_22950 PF02195 ParB-like nuclease domain C9I78_22955 PF13718 GNAT acetyltransferase 2 C9I78_22955 PF05127 Helicase C9I78_22965 PF00132 Bacterial transferase hexapeptide (six repeats) C9I78_22970 PF03466 LysR substrate binding domain C9I78_22970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_22975 PF03575 Peptidase family S51 C9I78_22980 PF00267 Gram-negative porin C9I78_22985 PF02378 Phosphotransferase system, EIIC C9I78_22985 PF00367 phosphotransferase system, EIIB C9I78_22990 PF01380 SIS domain C9I78_23000 PF01418 Helix-turn-helix domain, rpiR family C9I78_23000 PF01380 SIS domain C9I78_23005 PF00246 Zinc carboxypeptidase C9I78_23010 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C9I78_23015 PF03358 NADPH-dependent FMN reductase C9I78_23025 PF00664 ABC transporter transmembrane region C9I78_23025 PF00005 ABC transporter C9I78_23025 PF03412 Peptidase C39 family C9I78_23040 PF00529 HlyD membrane-fusion protein of T1SS C9I78_23045 PF00072 Response regulator receiver domain C9I78_23045 PF02954 Bacterial regulatory protein, Fis family C9I78_23045 PF00158 Sigma-54 interaction domain C9I78_23050 PF02743 Cache domain C9I78_23050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_23050 PF00512 His Kinase A (phospho-acceptor) domain C9I78_23060 PF01243 Pyridoxamine 5'-phosphate oxidase C9I78_23060 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region C9I78_23075 PF12833 Helix-turn-helix domain C9I78_23080 PF14850 DNA-binding domain of Proline dehydrogenase C9I78_23080 PF18327 Proline utilization A proline dehydrogenase N-terminal domain C9I78_23080 PF00171 Aldehyde dehydrogenase family C9I78_23080 PF01619 Proline dehydrogenase C9I78_23090 PF00474 Sodium:solute symporter family C9I78_23125 PF01037 Lrp/AsnC ligand binding domain C9I78_23135 PF00005 ABC transporter C9I78_23135 PF00664 ABC transporter transmembrane region C9I78_23145 PF12833 Helix-turn-helix domain C9I78_23145 PF06719 AraC-type transcriptional regulator N-terminus C9I78_23165 PF10688 Bacterial inner membrane protein C9I78_23170 PF01081 KDPG and KHG aldolase C9I78_23180 PF02614 Glucuronate isomerase C9I78_23185 PF08125 Mannitol dehydrogenase C-terminal domain C9I78_23185 PF01232 Mannitol dehydrogenase Rossmann domain C9I78_23190 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component C9I78_23195 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component C9I78_23200 PF03480 Bacterial extracellular solute-binding protein, family 7 C9I78_23205 PF07729 FCD domain C9I78_23205 PF00392 Bacterial regulatory proteins, gntR family C9I78_23210 PF03786 D-mannonate dehydratase (UxuA) C9I78_23215 PF00271 Helicase conserved C-terminal domain C9I78_23215 PF00270 DEAD/DEAH box helicase C9I78_23220 PF03473 MOSC domain C9I78_23220 PF03475 3-alpha domain C9I78_23235 PF11975 Family 4 glycosyl hydrolase C-terminal domain C9I78_23235 PF02056 Family 4 glycosyl hydrolase C9I78_23240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_23240 PF03466 LysR substrate binding domain C9I78_23245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C9I78_23245 PF00672 HAMP domain C9I78_23245 PF12729 Four helix bundle sensory module for signal transduction C9I78_23260 PF08281 Sigma-70, region 4 C9I78_23260 PF04542 Sigma-70 region 2 C9I78_23265 PF12833 Helix-turn-helix domain C9I78_23265 PF01965 DJ-1/PfpI family C9I78_23275 PF03466 LysR substrate binding domain C9I78_23275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_23295 PF07992 Pyridine nucleotide-disulphide oxidoreductase C9I78_23295 PF13192 Thioredoxin domain C9I78_23300 PF10417 C-terminal domain of 1-Cys peroxiredoxin C9I78_23300 PF00578 AhpC/TSA family C9I78_23305 PF01047 MarR family C9I78_23310 PF02566 OsmC-like protein C9I78_23325 PF02311 AraC-like ligand binding domain C9I78_23325 PF12833 Helix-turn-helix domain C9I78_23335 PF11762 L-arabinose isomerase C-terminal domain C9I78_23335 PF02610 L-arabinose isomerase C9I78_23340 PF00596 Class II Aldolase and Adducin N-terminal domain C9I78_23345 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C9I78_23345 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C9I78_23350 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family C9I78_23355 PF00005 ABC transporter C9I78_23360 PF02653 Branched-chain amino acid transport system / permease component C9I78_23375 PF00367 phosphotransferase system, EIIB C9I78_23375 PF02378 Phosphotransferase system, EIIC C9I78_23385 PF00072 Response regulator receiver domain C9I78_23385 PF00486 Transcriptional regulatory protein, C terminal C9I78_23390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_23390 PF00512 His Kinase A (phospho-acceptor) domain C9I78_23390 PF08521 Two-component sensor kinase N-terminal C9I78_23395 PF01547 Bacterial extracellular solute-binding protein C9I78_23400 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C9I78_23400 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C9I78_23405 PF04183 IucA / IucC family C9I78_23405 PF06276 Ferric iron reductase FhuF-like transporter C9I78_23415 PF04183 IucA / IucC family C9I78_23415 PF06276 Ferric iron reductase FhuF-like transporter C9I78_23420 PF02655 ATP-grasp domain C9I78_23420 PF00206 Lyase C9I78_23425 PF07715 TonB-dependent Receptor Plug Domain C9I78_23425 PF00593 TonB dependent receptor C9I78_23430 PF07715 TonB-dependent Receptor Plug Domain C9I78_23430 PF07660 Secretin and TonB N terminus short domain C9I78_23430 PF00593 TonB dependent receptor C9I78_23435 PF01497 Periplasmic binding protein C9I78_23440 PF01032 FecCD transport family C9I78_23445 PF01032 FecCD transport family C9I78_23450 PF00005 ABC transporter C9I78_23455 PF00672 HAMP domain C9I78_23455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C9I78_23455 PF17200 Single Cache domain 2 C9I78_23460 PF00675 Insulinase (Peptidase family M16) C9I78_23460 PF05193 Peptidase M16 inactive domain C9I78_23470 PF04225 Opacity-associated protein A LysM-like domain C9I78_23470 PF01551 Peptidase family M23 C9I78_23480 PF07690 Major Facilitator Superfamily C9I78_23490 PF00128 Alpha amylase, catalytic domain C9I78_23490 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C9I78_23495 PF02264 LamB porin C9I78_23510 PF02903 Alpha amylase, N-terminal ig-like domain C9I78_23510 PF00128 Alpha amylase, catalytic domain C9I78_23510 PF16657 Maltogenic Amylase, C-terminal domain C9I78_23520 PF04231 Endonuclease I C9I78_23525 PF03714 Bacterial pullanase-associated domain C9I78_23525 PF18494 Pullulanase Ins domain C9I78_23525 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C9I78_23525 PF11852 Domain of unknown function (DUF3372) C9I78_23525 PF17967 Pullulanase N2 domain C9I78_23540 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain C9I78_23540 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain C9I78_23540 PF01276 Orn/Lys/Arg decarboxylase, major domain C9I78_23545 PF13520 Amino acid permease C9I78_23555 PF08543 Phosphomethylpyrimidine kinase C9I78_23565 PF00375 Sodium:dicarboxylate symporter family C9I78_23570 PF03193 RsgA GTPase C9I78_23575 PF02378 Phosphotransferase system, EIIC C9I78_23575 PF00367 phosphotransferase system, EIIB C9I78_23585 PF02630 SCO1/SenC C9I78_23600 PF00196 Bacterial regulatory proteins, luxR family C9I78_23600 PF17874 MalT-like TPR region C9I78_23615 PF00343 Carbohydrate phosphorylase C9I78_23620 PF02446 4-alpha-glucanotransferase C9I78_23625 PF02806 Alpha amylase, C-terminal all-beta domain C9I78_23625 PF00128 Alpha amylase, catalytic domain C9I78_23625 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C9I78_23630 PF00912 Transglycosylase C9I78_23635 PF00128 Alpha amylase, catalytic domain C9I78_23650 PF07670 Nucleoside recognition C9I78_23655 PF07670 Nucleoside recognition C9I78_23660 PF01546 Peptidase family M20/M25/M40 C9I78_23660 PF07687 Peptidase dimerisation domain C9I78_23665 PF06803 Protein of unknown function (DUF1232) C9I78_23670 PF00375 Sodium:dicarboxylate symporter family C9I78_23700 PF03466 LysR substrate binding domain C9I78_23700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_23705 PF08803 Putative mono-oxygenase ydhR C9I78_23715 PF13614 AAA domain C9I78_23715 PF02706 Chain length determinant protein C9I78_23715 PF13807 G-rich domain on putative tyrosine kinase C9I78_23720 PF01451 Low molecular weight phosphotyrosine protein phosphatase C9I78_23725 PF02563 Polysaccharide biosynthesis/export protein C9I78_23725 PF18412 Outer-membrane lipoprotein Wza C-terminal domain C9I78_23725 PF10531 SLBB domain C9I78_23730 PF00881 Nitroreductase family C9I78_23735 PF01914 MarC family integral membrane protein C9I78_23740 PF01734 Patatin-like phospholipase C9I78_23745 PF18416 N-acetylglucosamine binding protein domain 2 C9I78_23745 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading C9I78_23760 PF00561 alpha/beta hydrolase fold C9I78_23765 PF00768 D-alanyl-D-alanine carboxypeptidase C9I78_23765 PF07943 Penicillin-binding protein 5, C-terminal domain C9I78_23770 PF00128 Alpha amylase, catalytic domain C9I78_23770 PF00686 Starch binding domain C9I78_23780 PF00881 Nitroreductase family C9I78_23790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_23790 PF03466 LysR substrate binding domain C9I78_23795 PF09905 DNA-binding protein VF530 C9I78_23805 PF00970 Oxidoreductase FAD-binding domain C9I78_23805 PF00175 Oxidoreductase NAD-binding domain C9I78_23815 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) C9I78_23820 PF01594 AI-2E family transporter C9I78_23830 PF13533 Biotin-lipoyl like C9I78_23855 PF00892 EamA-like transporter family C9I78_23860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_23860 PF03466 LysR substrate binding domain C9I78_23865 PF07690 Major Facilitator Superfamily C9I78_23875 PF00583 Acetyltransferase (GNAT) family C9I78_23885 PF00923 Transaldolase/Fructose-6-phosphate aldolase C9I78_23890 PF04055 Radical SAM superfamily C9I78_23935 PF08000 Bacterial PH domain C9I78_23945 PF13677 Membrane MotB of proton-channel complex MotA/MotB C9I78_23945 PF00691 OmpA family C9I78_23950 PF01618 MotA/TolQ/ExbB proton channel family C9I78_23955 PF04545 Sigma-70, region 4 C9I78_23955 PF04542 Sigma-70 region 2 C9I78_23960 PF03748 Flagellar basal body-associated protein FliL C9I78_23975 PF02561 Flagellar protein FliS C9I78_23980 PF07195 Flagellar hook-associated protein 2 C-terminus C9I78_23980 PF02465 Flagellar hook-associated protein 2 N-terminus C9I78_23980 PF07196 Flagellin hook IN motif C9I78_23990 PF00700 Bacterial flagellin C-terminal helical region C9I78_23990 PF00669 Bacterial flagellin N-terminal helical region C9I78_24000 PF00771 FHIPEP family C9I78_24005 PF01312 FlhB HrpN YscU SpaS Family C9I78_24010 PF01311 Bacterial export proteins, family 1 C9I78_24015 PF01313 Bacterial export proteins, family 3 C9I78_24020 PF00813 FliP family C9I78_24025 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C9I78_24040 PF02954 Bacterial regulatory protein, Fis family C9I78_24040 PF00072 Response regulator receiver domain C9I78_24040 PF00158 Sigma-54 interaction domain C9I78_24045 PF02049 Flagellar hook-basal body complex protein FliE C9I78_24050 PF08345 Flagellar M-ring protein C-terminal C9I78_24050 PF01514 Secretory protein of YscJ/FliF family C9I78_24055 PF14842 FliG N-terminal domain C9I78_24055 PF14841 FliG middle domain C9I78_24055 PF01706 FliG C-terminal domain C9I78_24065 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C9I78_24065 PF18269 T3SS EscN ATPase C-terminal domain C9I78_24080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_24080 PF03466 LysR substrate binding domain C9I78_24115 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C9I78_24120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_24120 PF03466 LysR substrate binding domain C9I78_24150 PF00486 Transcriptional regulatory protein, C terminal C9I78_24150 PF00072 Response regulator receiver domain C9I78_24155 PF00072 Response regulator receiver domain C9I78_24155 PF13426 PAS domain C9I78_24155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_24155 PF08448 PAS fold C9I78_24155 PF00512 His Kinase A (phospho-acceptor) domain C9I78_24160 PF00080 Copper/zinc superoxide dismutase (SODC) C9I78_24165 PF00266 Aminotransferase class-V C9I78_24170 PF00497 Bacterial extracellular solute-binding proteins, family 3 C9I78_24175 PF00990 Diguanylate cyclase, GGDEF domain C9I78_24175 PF03707 Bacterial signalling protein N terminal repeat C9I78_24175 PF00563 EAL domain C9I78_24180 PF00155 Aminotransferase class I and II C9I78_24185 PF00107 Zinc-binding dehydrogenase C9I78_24185 PF08240 Alcohol dehydrogenase GroES-like domain C9I78_24220 PF00194 Eukaryotic-type carbonic anhydrase C9I78_24225 PF00924 Mechanosensitive ion channel C9I78_24235 PF01070 FMN-dependent dehydrogenase C9I78_24240 PF02652 L-lactate permease C9I78_24245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_24245 PF03466 LysR substrate binding domain C9I78_24250 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain C9I78_24250 PF00326 Prolyl oligopeptidase family C9I78_24255 PF00005 ABC transporter C9I78_24255 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C9I78_24265 PF05362 Lon protease (S16) C-terminal proteolytic domain C9I78_24265 PF13654 AAA domain C9I78_24270 PF00672 HAMP domain C9I78_24270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C9I78_24275 PF07238 PilZ domain C9I78_24275 PF12945 Flagellar protein YcgR C9I78_24295 PF00583 Acetyltransferase (GNAT) family C9I78_24300 PF12800 4Fe-4S binding domain C9I78_24300 PF12838 4Fe-4S dicluster domain C9I78_24305 PF13237 4Fe-4S dicluster domain C9I78_24305 PF12801 4Fe-4S binding domain C9I78_24320 PF12558 ATP-binding cassette cobalt transporter C9I78_24320 PF00005 ABC transporter C9I78_24325 PF07155 ECF-type riboflavin transporter, S component C9I78_24330 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C9I78_24330 PF00529 HlyD membrane-fusion protein of T1SS C9I78_24335 PF11742 Protein of unknown function (DUF3302) C9I78_24340 PF00990 Diguanylate cyclase, GGDEF domain C9I78_24355 PF01048 Phosphorylase superfamily C9I78_24365 PF08349 Protein of unknown function (DUF1722) C9I78_24370 PF13411 MerR HTH family regulatory protein C9I78_24375 PF03441 FAD binding domain of DNA photolyase C9I78_24375 PF00875 DNA photolyase C9I78_24380 PF03734 L,D-transpeptidase catalytic domain C9I78_24380 PF01476 LysM domain C9I78_24380 PF17969 L,D-transpeptidase C-terminal domain C9I78_24390 PF00270 DEAD/DEAH box helicase C9I78_24390 PF00271 Helicase conserved C-terminal domain C9I78_24395 PF00326 Prolyl oligopeptidase family C9I78_24395 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain C9I78_24400 PF07715 TonB-dependent Receptor Plug Domain C9I78_24400 PF00593 TonB dependent receptor C9I78_24420 PF00672 HAMP domain C9I78_24420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C9I78_24425 PF12849 PBP superfamily domain C9I78_24430 PF00528 Binding-protein-dependent transport system inner membrane component C9I78_24435 PF00528 Binding-protein-dependent transport system inner membrane component C9I78_24440 PF00005 ABC transporter C9I78_24455 PF13519 von Willebrand factor type A domain C9I78_24455 PF07584 Aerotolerance regulator N-terminal C9I78_24460 PF13519 von Willebrand factor type A domain C9I78_24470 PF01882 Protein of unknown function DUF58 C9I78_24475 PF07726 ATPase family associated with various cellular activities (AAA) C9I78_24475 PF17863 AAA lid domain C9I78_24485 PF02743 Cache domain C9I78_24485 PF00672 HAMP domain C9I78_24485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C9I78_24495 PF00196 Bacterial regulatory proteins, luxR family C9I78_24500 PF00196 Bacterial regulatory proteins, luxR family C9I78_24510 PF00664 ABC transporter transmembrane region C9I78_24510 PF00005 ABC transporter C9I78_24515 PF00529 HlyD membrane-fusion protein of T1SS C9I78_24530 PF00691 OmpA family C9I78_24540 PF01032 FecCD transport family C9I78_24545 PF01497 Periplasmic binding protein C9I78_24550 PF00005 ABC transporter C9I78_24555 PF07715 TonB-dependent Receptor Plug Domain C9I78_24555 PF00593 TonB dependent receptor C9I78_24560 PF00664 ABC transporter transmembrane region C9I78_24560 PF00005 ABC transporter C9I78_24565 PF00989 PAS fold C9I78_24565 PF16736 Single Cache-like C9I78_24565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_24565 PF00512 His Kinase A (phospho-acceptor) domain C9I78_24570 PF00486 Transcriptional regulatory protein, C terminal C9I78_24570 PF00072 Response regulator receiver domain C9I78_24575 PF02254 TrkA-N domain C9I78_24575 PF02080 TrkA-C domain C9I78_24580 PF02386 Cation transport protein C9I78_24585 PF00563 EAL domain C9I78_24585 PF03707 Bacterial signalling protein N terminal repeat C9I78_24585 PF00990 Diguanylate cyclase, GGDEF domain C9I78_24590 PF00127 Copper binding proteins, plastocyanin/azurin family C9I78_24595 PF13419 Haloacid dehalogenase-like hydrolase C9I78_24605 PF01238 Phosphomannose isomerase type I C9I78_24610 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C9I78_24610 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C9I78_24615 PF12833 Helix-turn-helix domain C9I78_24625 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C9I78_24635 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C9I78_24635 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C9I78_24640 PF00199 Catalase C9I78_24640 PF06628 Catalase-related immune-responsive C9I78_24645 PF13417 Glutathione S-transferase, N-terminal domain C9I78_24650 PF00107 Zinc-binding dehydrogenase C9I78_24650 PF16884 N-terminal domain of oxidoreductase C9I78_24655 PF00440 Bacterial regulatory proteins, tetR family C9I78_24655 PF16925 Tetracyclin repressor-like, C-terminal domain C9I78_24690 PF00534 Glycosyl transferases group 1 C9I78_24690 PF13439 Glycosyltransferase Family 4 C9I78_24700 PF13807 G-rich domain on putative tyrosine kinase C9I78_24700 PF13614 AAA domain C9I78_24700 PF02706 Chain length determinant protein C9I78_24715 PF02397 Bacterial sugar transferase C9I78_24720 PF08402 TOBE domain C9I78_24720 PF00005 ABC transporter C9I78_24725 PF01547 Bacterial extracellular solute-binding protein C9I78_24730 PF00528 Binding-protein-dependent transport system inner membrane component C9I78_24730 PF14785 Maltose transport system permease protein MalF P2 domain C9I78_24735 PF00528 Binding-protein-dependent transport system inner membrane component C9I78_24795 PF01872 RibD C-terminal domain C9I78_24800 PF00440 Bacterial regulatory proteins, tetR family C9I78_24800 PF02909 Tetracyclin repressor-like, C-terminal domain C9I78_24805 PF02798 Glutathione S-transferase, N-terminal domain C9I78_24820 PF00768 D-alanyl-D-alanine carboxypeptidase C9I78_24820 PF07943 Penicillin-binding protein 5, C-terminal domain C9I78_24840 PF00462 Glutaredoxin C9I78_24840 PF08534 Redoxin C9I78_24845 PF00962 Adenosine/AMP deaminase C9I78_24865 PF00313 'Cold-shock' DNA-binding domain C9I78_24870 PF02678 Pirin C9I78_24870 PF05726 Pirin C-terminal cupin domain C9I78_24875 PF01734 Patatin-like phospholipase C9I78_24885 PF01047 MarR family C9I78_24910 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C9I78_24915 PF00884 Sulfatase C9I78_24915 PF08019 Phosphoethanolamine transferase EptA/EptB C9I78_24920 PF01219 Prokaryotic diacylglycerol kinase C9I78_24930 PF00512 His Kinase A (phospho-acceptor) domain C9I78_24930 PF00672 HAMP domain C9I78_24930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_24935 PF00486 Transcriptional regulatory protein, C terminal C9I78_24935 PF00072 Response regulator receiver domain C9I78_24940 PF00106 short chain dehydrogenase C9I78_24960 PF01323 DSBA-like thioredoxin domain C9I78_24975 PF00255 Glutathione peroxidase C9I78_24980 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C9I78_24990 PF07690 Major Facilitator Superfamily C9I78_25005 PF01966 HD domain C9I78_25015 PF07969 Amidohydrolase family C9I78_25020 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin C9I78_25030 PF03448 MgtE intracellular N domain C9I78_25030 PF01769 Divalent cation transporter C9I78_25030 PF00571 CBS domain C9I78_25035 PF03109 ABC1 family C9I78_25040 PF00529 HlyD membrane-fusion protein of T1SS C9I78_25040 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C9I78_25050 PF12833 Helix-turn-helix domain C9I78_25050 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term C9I78_25065 PF00072 Response regulator receiver domain C9I78_25065 PF00486 Transcriptional regulatory protein, C terminal C9I78_25070 PF00672 HAMP domain C9I78_25070 PF00512 His Kinase A (phospho-acceptor) domain C9I78_25070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_25070 PF16527 Two-component sensor protein CpxA, periplasmic domain C9I78_25080 PF00155 Aminotransferase class I and II C9I78_25080 PF00392 Bacterial regulatory proteins, gntR family C9I78_25085 PF13520 Amino acid permease C9I78_25100 PF03466 LysR substrate binding domain C9I78_25100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_25115 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C9I78_25115 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C9I78_25120 PF00672 HAMP domain C9I78_25120 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C9I78_25120 PF00072 Response regulator receiver domain C9I78_25120 PF01627 Hpt domain C9I78_25120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_25120 PF00512 His Kinase A (phospho-acceptor) domain C9I78_25125 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C9I78_25130 PF01554 MatE C9I78_25135 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 C9I78_25135 PF13542 Helix-turn-helix domain of transposase family ISL3 C9I78_25135 PF01610 Transposase C9I78_25140 PF04363 Protein of unknown function (DUF496) C9I78_25155 PF04337 Protein of unknown function, DUF480 C9I78_25160 PF01541 GIY-YIG catalytic domain C9I78_25165 PF13407 Periplasmic binding protein domain C9I78_25170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_25170 PF00072 Response regulator receiver domain C9I78_25170 PF09308 LuxQ, periplasmic C9I78_25170 PF00512 His Kinase A (phospho-acceptor) domain C9I78_25180 PF00529 HlyD membrane-fusion protein of T1SS C9I78_25180 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C9I78_25200 PF01037 Lrp/AsnC ligand binding domain C9I78_25230 PF02355 Protein export membrane protein C9I78_25230 PF13721 SecD export protein N-terminal TM region C9I78_25230 PF07549 SecD/SecF GG Motif C9I78_25235 PF02355 Protein export membrane protein C9I78_25235 PF07549 SecD/SecF GG Motif C9I78_25250 PF00106 short chain dehydrogenase C9I78_25255 PF02803 Thiolase, C-terminal domain C9I78_25255 PF00108 Thiolase, N-terminal domain C9I78_25265 PF00561 alpha/beta hydrolase fold C9I78_25265 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus C9I78_25275 PF03264 NapC/NirT cytochrome c family, N-terminal region C9I78_25280 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) C9I78_25285 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C9I78_25285 PF00384 Molybdopterin oxidoreductase C9I78_25285 PF01568 Molydopterin dinucleotide binding domain C9I78_25295 PF12838 4Fe-4S dicluster domain C9I78_25295 PF13187 4Fe-4S dicluster domain C9I78_25300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_25300 PF07730 Histidine kinase C9I78_25300 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term C9I78_25300 PF00672 HAMP domain C9I78_25305 PF00196 Bacterial regulatory proteins, luxR family C9I78_25305 PF00072 Response regulator receiver domain C9I78_25320 PF07687 Peptidase dimerisation domain C9I78_25320 PF01546 Peptidase family M20/M25/M40 C9I78_25325 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C9I78_25330 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C9I78_25335 PF00873 AcrB/AcrD/AcrF family C9I78_25340 PF12729 Four helix bundle sensory module for signal transduction C9I78_25340 PF00672 HAMP domain C9I78_25340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C9I78_25345 PF00472 RF-1 domain C9I78_25350 PF13419 Haloacid dehalogenase-like hydrolase C9I78_25355 PF01389 OmpA-like transmembrane domain C9I78_25355 PF00691 OmpA family C9I78_25365 PF00793 DAHP synthetase I family C9I78_25370 PF07690 Major Facilitator Superfamily C9I78_25380 PF08447 PAS fold C9I78_25380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C9I78_25385 PF02780 Transketolase, C-terminal domain C9I78_25385 PF02779 Transketolase, pyrimidine binding domain C9I78_25385 PF00456 Transketolase, thiamine diphosphate binding domain C9I78_25390 PF00923 Transaldolase/Fructose-6-phosphate aldolase C9I78_25410 PF08329 Chitinase A, N-terminal domain C9I78_25410 PF00704 Glycosyl hydrolases family 18 C9I78_25415 PF00990 Diguanylate cyclase, GGDEF domain C9I78_25415 PF00563 EAL domain C9I78_25415 PF03707 Bacterial signalling protein N terminal repeat C9I78_25420 PF00581 Rhodanese-like domain C9I78_25440 PF00899 ThiF family C9I78_25445 PF00994 Probable molybdopterin binding domain C9I78_25445 PF03453 MoeA N-terminal region (domain I and II) C9I78_25445 PF03454 MoeA C-terminal region (domain IV) C9I78_25450 PF01227 GTP cyclohydrolase I C9I78_25455 PF01566 Natural resistance-associated macrophage protein C9I78_25465 PF00654 Voltage gated chloride channel C9I78_25480 PF00248 Aldo/keto reductase family C9I78_25485 PF00072 Response regulator receiver domain C9I78_25495 PF01256 Carbohydrate kinase C9I78_25495 PF03853 YjeF-related protein N-terminus C9I78_25500 PF00478 IMP dehydrogenase / GMP reductase domain C9I78_25505 PF13193 AMP-binding enzyme C-terminal domain C9I78_25505 PF00501 AMP-binding enzyme C9I78_25510 PF01012 Electron transfer flavoprotein domain C9I78_25510 PF00766 Electron transfer flavoprotein FAD-binding domain C9I78_25515 PF01012 Electron transfer flavoprotein domain C9I78_25530 PF12399 Branched-chain amino acid ATP-binding cassette transporter C9I78_25530 PF00005 ABC transporter C9I78_25555 PF00005 ABC transporter C9I78_25560 PF00501 AMP-binding enzyme C9I78_25560 PF14535 AMP-binding enzyme C-terminal domain C9I78_25565 PF05724 Thiopurine S-methyltransferase (TPMT) C9I78_25570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C9I78_25570 PF03466 LysR substrate binding domain C9I78_25575 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg C9I78_25575 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase C9I78_25575 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II C9I78_25580 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C9I78_25585 PF00034 Cytochrome c C9I78_25595 PF13411 MerR HTH family regulatory protein C9I78_25600 PF02627 Carboxymuconolactone decarboxylase family C9I78_25605 PF02567 Phenazine biosynthesis-like protein C9I78_25615 PF02322 Cytochrome bd terminal oxidase subunit II C9I78_25620 PF01654 Cytochrome bd terminal oxidase subunit I C9I78_25625 PF00392 Bacterial regulatory proteins, gntR family C9I78_25625 PF00155 Aminotransferase class I and II C9I78_25630 PF14602 Hexapeptide repeat of succinyl-transferase C9I78_25630 PF12464 Maltose acetyltransferase C9I78_25640 PF00924 Mechanosensitive ion channel C9I78_25640 PF12795 Mechanosensitive ion channel porin domain C9I78_25640 PF12794 Mechanosensitive ion channel inner membrane domain 1 C9I78_25655 PF01627 Hpt domain C9I78_25655 PF00672 HAMP domain C9I78_25655 PF00072 Response regulator receiver domain C9I78_25655 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C9I78_25655 PF00512 His Kinase A (phospho-acceptor) domain C9I78_25655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_25660 PF00682 HMGL-like C9I78_25670 PF00378 Enoyl-CoA hydratase/isomerase C9I78_25675 PF01039 Carboxyl transferase domain C9I78_25680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C9I78_25680 PF02770 Acyl-CoA dehydrogenase, middle domain C9I78_25680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C9I78_25685 PF00376 MerR family regulatory protein C9I78_25685 PF09278 MerR, DNA binding C9I78_25690 PF02803 Thiolase, C-terminal domain C9I78_25690 PF00108 Thiolase, N-terminal domain C9I78_25695 PF00171 Aldehyde dehydrogenase family C9I78_25700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C9I78_25700 PF02770 Acyl-CoA dehydrogenase, middle domain C9I78_25700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C9I78_25705 PF00378 Enoyl-CoA hydratase/isomerase C9I78_25715 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C9I78_25715 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C9I78_25730 PF00990 Diguanylate cyclase, GGDEF domain C9I78_25730 PF17151 Periplasmic sensor domain C9I78_25735 PF13977 BetI-type transcriptional repressor, C-terminal C9I78_25735 PF00440 Bacterial regulatory proteins, tetR family C9I78_25740 PF00171 Aldehyde dehydrogenase family C9I78_25745 PF05199 GMC oxidoreductase C9I78_25745 PF00732 GMC oxidoreductase C9I78_25750 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C9I78_25755 PF00528 Binding-protein-dependent transport system inner membrane component C9I78_25760 PF00571 CBS domain C9I78_25760 PF00005 ABC transporter C9I78_25765 PF00881 Nitroreductase family C9I78_25775 PF01145 SPFH domain / Band 7 family C9I78_25775 PF16200 C-terminal region of band_7 C9I78_25785 PF00563 EAL domain C9I78_25785 PF00990 Diguanylate cyclase, GGDEF domain C9I78_25785 PF03707 Bacterial signalling protein N terminal repeat C9I78_25785 PF13188 PAS domain C9I78_25800 PF03150 Di-haem cytochrome c peroxidase C9I78_25800 PF00034 Cytochrome c C9I78_25805 PF09308 LuxQ, periplasmic C9I78_25805 PF00512 His Kinase A (phospho-acceptor) domain C9I78_25805 PF00072 Response regulator receiver domain C9I78_25805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C9I78_25820 PF04116 Fatty acid hydroxylase superfamily C9I78_25825 PF02899 Phage integrase, N-terminal SAM-like domain C9I78_25825 PF00589 Phage integrase family C9I78_25845 PF14490 Helix-hairpin-helix containing domain C9I78_25845 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain C9I78_25845 PF13538 UvrD-like helicase C-terminal domain C9I78_25865 PF01526 Tn3 transposase DDE domain C9I78_25865 PF13700 Domain of unknown function (DUF4158) C9I78_25870 PF00239 Resolvase, N terminal domain C9I78_25870 PF02796 Helix-turn-helix domain of resolvase C9I78_25900 PF05973 Phage derived protein Gp49-like (DUF891) C9I78_25940 PF13356 Arm DNA-binding domain C9I78_25940 PF00589 Phage integrase family C9I78_25980 PF01555 DNA methylase C9I78_25990 PF02796 Helix-turn-helix domain of resolvase C9I78_25990 PF00239 Resolvase, N terminal domain C9I78_25995 PF00194 Eukaryotic-type carbonic anhydrase C9I78_26000 PF00990 Diguanylate cyclase, GGDEF domain C9I78_26000 PF08448 PAS fold C9I78_26030 PF04002 RadC-like JAB domain C9I78_26045 PF02796 Helix-turn-helix domain of resolvase C9I78_26045 PF00239 Resolvase, N terminal domain C9I78_26050 PF01526 Tn3 transposase DDE domain C9I78_26050 PF13700 Domain of unknown function (DUF4158) C9I78_26055 PF04002 RadC-like JAB domain C9I78_26075 PF00437 Type II/IV secretion system protein C9I78_26085 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C9I78_26100 PF03432 Relaxase/Mobilisation nuclease domain C9I78_26100 PF18821 Large polyvalent protein-associated domain 7 C9I78_26110 PF01848 Hok/gef family C9I78_26125 PF13362 Toprim domain C9I78_26125 PF08401 Domain of unknown function (DUF1738) C9I78_26125 PF18818 Metallopeptidase superfamily domain C9I78_26140 PF01464 Transglycosylase SLT domain C9I78_26150 PF01751 Toprim domain C9I78_26150 PF01131 DNA topoisomerase C9I78_26170 PF10502 Signal peptidase, peptidase S26 C9I78_26175 PF02534 Type IV secretory system Conjugative DNA transfer C9I78_26185 PF03743 Bacterial conjugation TrbI-like protein C9I78_26195 PF03524 Conjugal transfer protein C9I78_26200 PF04335 VirB8 protein C9I78_26220 PF03135 CagE, TrbE, VirB family, component of type IV transporter system C9I78_26230 PF04956 TrbC/VIRB2 family C9I78_26235 PF00717 Peptidase S24-like C9I78_26235 PF01381 Helix-turn-helix C9I78_26245 PF13614 AAA domain C9I78_26260 PF02796 Helix-turn-helix domain of resolvase C9I78_26260 PF00239 Resolvase, N terminal domain C9I78_26280 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system C9I78_26305 PF13614 AAA domain C9I78_26315 PF13700 Domain of unknown function (DUF4158) C9I78_26315 PF01526 Tn3 transposase DDE domain C9I78_26320 PF02796 Helix-turn-helix domain of resolvase C9I78_26320 PF00239 Resolvase, N terminal domain C9I78_26345 PF04956 TrbC/VIRB2 family C9I78_26350 PF05101 Type IV secretory pathway, VirB3-like protein C9I78_26355 PF03135 CagE, TrbE, VirB family, component of type IV transporter system C9I78_26365 PF00437 Type II/IV secretion system protein C9I78_26380 PF03524 Conjugal transfer protein C9I78_26390 PF03743 Bacterial conjugation TrbI-like protein C9I78_26415 PF00437 Type II/IV secretion system protein C9I78_26455 PF01848 Hok/gef family C9I78_26475 PF10502 Signal peptidase, peptidase S26 C9I78_26480 PF01464 Transglycosylase SLT domain C9I78_26545 PF01131 DNA topoisomerase C9I78_26545 PF01751 Toprim domain C9I78_26580 PF18818 Metallopeptidase superfamily domain C9I78_26580 PF13362 Toprim domain C9I78_26580 PF08401 Domain of unknown function (DUF1738) C9I78_26610 PF01848 Hok/gef family C9I78_26635 PF07669 Eco57I restriction-modification methylase C9I78_26635 PF02384 N-6 DNA Methylase C9I78_26640 PF13737 Transposase DDE domain C9I78_26655 PF13737 Transposase DDE domain C9I78_26675 PF13737 Transposase DDE domain