DA442_08900 a3cdbdea3f869d6e8df21192a6f19e92 506 Pfam PF00171 Aldehyde dehydrogenase family 27 493 3.9E-166 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DA442_08900 a3cdbdea3f869d6e8df21192a6f19e92 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DA442_08900 a3cdbdea3f869d6e8df21192a6f19e92 506 SUPERFAMILY SSF53720 13 497 2.36E-162 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DA442_08900 a3cdbdea3f869d6e8df21192a6f19e92 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DA442_08900 a3cdbdea3f869d6e8df21192a6f19e92 506 Gene3D G3DSA:3.40.309.10 266 464 1.8E-165 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DA442_08900 a3cdbdea3f869d6e8df21192a6f19e92 506 Gene3D G3DSA:3.40.605.10 23 492 1.8E-165 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DA442_16330 1da8c6dd3a5ae60ebba39d90bb041539 608 SUPERFAMILY SSF51206 8 128 1.7E-16 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like DA442_16330 1da8c6dd3a5ae60ebba39d90bb041539 608 Gene3D G3DSA:2.60.120.10 5 139 1.4E-12 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DA442_16330 1da8c6dd3a5ae60ebba39d90bb041539 608 Gene3D G3DSA:3.10.580.10 140 288 1.4E-15 T 14-10-2018 DA442_16330 1da8c6dd3a5ae60ebba39d90bb041539 608 Pfam PF03445 Putative nucleotidyltransferase DUF294 302 433 2.4E-42 T 14-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 DA442_16330 1da8c6dd3a5ae60ebba39d90bb041539 608 SUPERFAMILY SSF54631 144 276 8.52E-16 T 14-10-2018 DA442_16330 1da8c6dd3a5ae60ebba39d90bb041539 608 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 471 604 5.1E-39 T 14-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding DA442_16330 1da8c6dd3a5ae60ebba39d90bb041539 608 Pfam PF00027 Cyclic nucleotide-binding domain 31 113 2.2E-9 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain DA442_20725 fe1c5c333cc4c37f5d7558efa8732e91 249 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 8 248 1.6E-135 T 14-10-2018 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823 DA442_20725 fe1c5c333cc4c37f5d7558efa8732e91 249 SUPERFAMILY SSF69572 4 249 4.32E-86 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 DA442_20725 fe1c5c333cc4c37f5d7558efa8732e91 249 Pfam PF00899 ThiF family 12 245 1.4E-64 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 DA442_20725 fe1c5c333cc4c37f5d7558efa8732e91 249 Gene3D G3DSA:3.40.50.720 4 249 4.0E-87 T 14-10-2018 DA442_02840 b59f8a53ea2bc8ae2de550875455e6e9 392 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 9 91 7.1E-27 T 14-10-2018 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 DA442_02840 b59f8a53ea2bc8ae2de550875455e6e9 392 SUPERFAMILY SSF55021 284 381 2.37E-26 T 14-10-2018 DA442_02840 b59f8a53ea2bc8ae2de550875455e6e9 392 Gene3D G3DSA:3.30.70.260 295 383 1.3E-25 T 14-10-2018 DA442_02840 b59f8a53ea2bc8ae2de550875455e6e9 392 SUPERFAMILY SSF53850 109 295 3.8E-56 T 14-10-2018 DA442_02840 b59f8a53ea2bc8ae2de550875455e6e9 392 SMART SM00830 12 93 1.4E-21 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DA442_02840 b59f8a53ea2bc8ae2de550875455e6e9 392 Gene3D G3DSA:3.40.190.10 113 287 4.4E-55 T 14-10-2018 DA442_02840 b59f8a53ea2bc8ae2de550875455e6e9 392 Gene3D G3DSA:3.40.190.10 193 278 4.4E-55 T 14-10-2018 DA442_02840 b59f8a53ea2bc8ae2de550875455e6e9 392 Pfam PF00800 Prephenate dehydratase 110 291 3.7E-60 T 14-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 DA442_02840 b59f8a53ea2bc8ae2de550875455e6e9 392 Gene3D G3DSA:1.20.59.10 3 112 8.6E-31 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DA442_02840 b59f8a53ea2bc8ae2de550875455e6e9 392 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 329 336 - T 14-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 DA442_02840 b59f8a53ea2bc8ae2de550875455e6e9 392 Pfam PF01817 Chorismate mutase type II 12 91 2.8E-16 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DA442_02840 b59f8a53ea2bc8ae2de550875455e6e9 392 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 265 287 - T 14-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 DA442_02840 b59f8a53ea2bc8ae2de550875455e6e9 392 PIRSF PIRSF001500 1 384 6.5E-143 T 14-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 DA442_02840 b59f8a53ea2bc8ae2de550875455e6e9 392 SUPERFAMILY SSF48600 7 95 7.51E-19 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DA442_02485 7bb1ec6c1ccb4c7835f3377e54d393fd 1517 Pfam PF01645 Conserved region in glutamate synthase 817 1187 1.1E-150 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 DA442_02485 7bb1ec6c1ccb4c7835f3377e54d393fd 1517 Gene3D G3DSA:3.60.20.10 21 560 0.0 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DA442_02485 7bb1ec6c1ccb4c7835f3377e54d393fd 1517 Pfam PF00310 Glutamine amidotransferases class-II 21 443 1.2E-184 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain DA442_02485 7bb1ec6c1ccb4c7835f3377e54d393fd 1517 Pfam PF04898 Glutamate synthase central domain 472 756 1.9E-117 T 14-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 DA442_02485 7bb1ec6c1ccb4c7835f3377e54d393fd 1517 Gene3D G3DSA:2.160.20.60 1239 1510 1.4E-109 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 DA442_02485 7bb1ec6c1ccb4c7835f3377e54d393fd 1517 SUPERFAMILY SSF56235 21 447 6.95E-153 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DA442_02485 7bb1ec6c1ccb4c7835f3377e54d393fd 1517 Pfam PF01493 GXGXG motif 1267 1452 1.9E-84 T 14-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 DA442_02485 7bb1ec6c1ccb4c7835f3377e54d393fd 1517 Gene3D G3DSA:3.20.20.70 448 815 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_02485 7bb1ec6c1ccb4c7835f3377e54d393fd 1517 Gene3D G3DSA:3.20.20.70 498 1204 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_02485 7bb1ec6c1ccb4c7835f3377e54d393fd 1517 SUPERFAMILY SSF51395 452 1221 1.58E-268 T 14-10-2018 DA442_02485 7bb1ec6c1ccb4c7835f3377e54d393fd 1517 SUPERFAMILY SSF69336 1235 1498 8.76E-96 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 DA442_04995 cb872498962b58f8185aa370c580cfc0 667 Pfam PF00990 Diguanylate cyclase, GGDEF domain 512 655 4.0E-26 T 14-10-2018 IPR000160 GGDEF domain DA442_04995 cb872498962b58f8185aa370c580cfc0 667 Gene3D G3DSA:3.40.190.10 102 177 6.6E-19 T 14-10-2018 DA442_04995 cb872498962b58f8185aa370c580cfc0 667 Gene3D G3DSA:3.40.190.10 336 433 3.6E-20 T 14-10-2018 DA442_04995 cb872498962b58f8185aa370c580cfc0 667 Gene3D G3DSA:3.30.70.270 504 658 3.0E-31 T 14-10-2018 DA442_04995 cb872498962b58f8185aa370c580cfc0 667 SUPERFAMILY SSF53850 44 200 2.3E-22 T 14-10-2018 DA442_04995 cb872498962b58f8185aa370c580cfc0 667 Gene3D G3DSA:3.40.190.10 44 101 6.6E-19 T 14-10-2018 DA442_04995 cb872498962b58f8185aa370c580cfc0 667 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 257 458 8.6E-19 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DA442_04995 cb872498962b58f8185aa370c580cfc0 667 SUPERFAMILY SSF55073 516 656 4.87E-27 T 14-10-2018 IPR029787 Nucleotide cyclase DA442_04995 cb872498962b58f8185aa370c580cfc0 667 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 45 194 2.6E-16 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DA442_04995 cb872498962b58f8185aa370c580cfc0 667 SMART SM00267 500 660 3.1E-21 T 14-10-2018 IPR000160 GGDEF domain DA442_04995 cb872498962b58f8185aa370c580cfc0 667 SUPERFAMILY SSF53850 250 460 1.12E-25 T 14-10-2018 DA442_04995 cb872498962b58f8185aa370c580cfc0 667 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 509 656 7.3E-28 T 14-10-2018 IPR000160 GGDEF domain DA442_04995 cb872498962b58f8185aa370c580cfc0 667 SMART SM00062 29 227 2.4E-4 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DA442_04995 cb872498962b58f8185aa370c580cfc0 667 Gene3D G3DSA:3.40.190.10 250 460 3.6E-20 T 14-10-2018 DA442_15085 47cd633cd146809c0a693f129e2e3558 309 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 3.0E-33 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 DA442_15085 47cd633cd146809c0a693f129e2e3558 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 9.7E-38 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DA442_15085 47cd633cd146809c0a693f129e2e3558 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 9.7E-38 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DA442_15085 47cd633cd146809c0a693f129e2e3558 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 9.7E-38 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DA442_15085 47cd633cd146809c0a693f129e2e3558 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 9.7E-38 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DA442_15085 47cd633cd146809c0a693f129e2e3558 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 9.7E-38 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DA442_15085 47cd633cd146809c0a693f129e2e3558 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 9.7E-38 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DA442_15085 47cd633cd146809c0a693f129e2e3558 309 Gene3D G3DSA:3.40.50.1370 8 304 1.3E-122 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DA442_15085 47cd633cd146809c0a693f129e2e3558 309 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DA442_15085 47cd633cd146809c0a693f129e2e3558 309 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.935 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DA442_15085 47cd633cd146809c0a693f129e2e3558 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 5.3E-27 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DA442_15085 47cd633cd146809c0a693f129e2e3558 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 5.3E-27 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DA442_15085 47cd633cd146809c0a693f129e2e3558 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 5.3E-27 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DA442_15085 47cd633cd146809c0a693f129e2e3558 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 5.3E-27 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DA442_15085 47cd633cd146809c0a693f129e2e3558 309 Gene3D G3DSA:3.40.50.1370 135 292 1.3E-122 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DA442_15085 47cd633cd146809c0a693f129e2e3558 309 SUPERFAMILY SSF53671 4 307 1.57E-102 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DA442_15085 47cd633cd146809c0a693f129e2e3558 309 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 1.9E-45 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 DA442_15085 47cd633cd146809c0a693f129e2e3558 309 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 1.4E-118 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DA442_20035 c20abe86450ecb11eb2c7f5eff36cf51 231 PIRSF PIRSF029287 2 230 1.8E-33 T 14-10-2018 IPR017748 T6S-associated protein TagF DA442_20035 c20abe86450ecb11eb2c7f5eff36cf51 231 Pfam PF09867 Uncharacterized protein conserved in bacteria (DUF2094) 11 140 3.5E-39 T 14-10-2018 IPR017748 T6S-associated protein TagF DA442_20035 c20abe86450ecb11eb2c7f5eff36cf51 231 Gene3D G3DSA:3.40.1730.10 8 230 5.2E-59 T 14-10-2018 IPR038225 T6S-associated protein TagF superfamily DA442_20035 c20abe86450ecb11eb2c7f5eff36cf51 231 TIGRFAM TIGR03373 VI_minor_4: type VI secretion-associated protein, BMA_A0400 family 11 141 3.9E-45 T 14-10-2018 IPR017748 T6S-associated protein TagF DA442_17175 287a445322cb18ba3ce0a637662362e6 313 Pfam PF03466 LysR substrate binding domain 97 308 7.9E-30 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_17175 287a445322cb18ba3ce0a637662362e6 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 2.6E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_17175 287a445322cb18ba3ce0a637662362e6 313 Gene3D G3DSA:3.40.190.10 94 304 1.4E-59 T 14-10-2018 DA442_17175 287a445322cb18ba3ce0a637662362e6 313 SUPERFAMILY SSF46785 7 86 2.01E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_17175 287a445322cb18ba3ce0a637662362e6 313 Gene3D G3DSA:1.10.10.10 2 89 2.7E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_17175 287a445322cb18ba3ce0a637662362e6 313 Gene3D G3DSA:3.40.190.10 182 280 1.4E-59 T 14-10-2018 DA442_17175 287a445322cb18ba3ce0a637662362e6 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 8.5E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_17175 287a445322cb18ba3ce0a637662362e6 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 8.5E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_17175 287a445322cb18ba3ce0a637662362e6 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 8.5E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_17175 287a445322cb18ba3ce0a637662362e6 313 SUPERFAMILY SSF53850 92 306 1.0E-49 T 14-10-2018 DA442_18335 21842749a9025bde95cdcefd83834e01 309 Gene3D G3DSA:3.40.190.10 96 300 3.6E-46 T 14-10-2018 DA442_18335 21842749a9025bde95cdcefd83834e01 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 50 1.3E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_18335 21842749a9025bde95cdcefd83834e01 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 61 1.3E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_18335 21842749a9025bde95cdcefd83834e01 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 40 1.3E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_18335 21842749a9025bde95cdcefd83834e01 309 SUPERFAMILY SSF46785 10 88 2.13E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_18335 21842749a9025bde95cdcefd83834e01 309 Gene3D G3DSA:3.40.190.10 177 275 3.6E-46 T 14-10-2018 DA442_18335 21842749a9025bde95cdcefd83834e01 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 70 2.2E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_18335 21842749a9025bde95cdcefd83834e01 309 Pfam PF03466 LysR substrate binding domain 105 302 6.8E-20 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_18335 21842749a9025bde95cdcefd83834e01 309 SUPERFAMILY SSF53850 96 301 1.14E-33 T 14-10-2018 DA442_18335 21842749a9025bde95cdcefd83834e01 309 Gene3D G3DSA:1.10.10.10 5 93 3.1E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_00615 5960e06dbbf0771ecf7db637ce678d3f 467 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 466 4.6E-238 T 14-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 DA442_00615 5960e06dbbf0771ecf7db637ce678d3f 467 SMART SM00382 162 316 1.4E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_00615 5960e06dbbf0771ecf7db637ce678d3f 467 Gene3D G3DSA:1.10.8.60 313 380 1.6E-17 T 14-10-2018 DA442_00615 5960e06dbbf0771ecf7db637ce678d3f 467 SUPERFAMILY SSF52540 141 385 1.41E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_00615 5960e06dbbf0771ecf7db637ce678d3f 467 SMART SM00448 4 115 3.1E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_00615 5960e06dbbf0771ecf7db637ce678d3f 467 Gene3D G3DSA:3.40.50.300 127 312 6.7E-67 T 14-10-2018 DA442_00615 5960e06dbbf0771ecf7db637ce678d3f 467 Pfam PF00158 Sigma-54 interaction domain 142 308 6.0E-71 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DA442_00615 5960e06dbbf0771ecf7db637ce678d3f 467 SUPERFAMILY SSF46689 382 466 2.28E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_00615 5960e06dbbf0771ecf7db637ce678d3f 467 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DA442_00615 5960e06dbbf0771ecf7db637ce678d3f 467 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site DA442_00615 5960e06dbbf0771ecf7db637ce678d3f 467 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DA442_00615 5960e06dbbf0771ecf7db637ce678d3f 467 Pfam PF02954 Bacterial regulatory protein, Fis family 426 466 2.7E-16 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DA442_00615 5960e06dbbf0771ecf7db637ce678d3f 467 Gene3D G3DSA:1.10.10.60 381 467 1.7E-26 T 14-10-2018 DA442_00615 5960e06dbbf0771ecf7db637ce678d3f 467 SUPERFAMILY SSF52172 2 187 3.42E-43 T 14-10-2018 IPR011006 CheY-like superfamily DA442_00615 5960e06dbbf0771ecf7db637ce678d3f 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 1.3E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DA442_00615 5960e06dbbf0771ecf7db637ce678d3f 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 467 1.3E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DA442_00615 5960e06dbbf0771ecf7db637ce678d3f 467 Gene3D G3DSA:3.40.50.2300 1 124 2.7E-40 T 14-10-2018 DA442_00615 5960e06dbbf0771ecf7db637ce678d3f 467 Pfam PF00072 Response regulator receiver domain 6 115 1.6E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_05700 19100c71a5b9fa6cdc50a8195e9246b3 435 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 433 40.219 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DA442_05700 19100c71a5b9fa6cdc50a8195e9246b3 435 SUPERFAMILY SSF55681 118 429 2.31E-97 T 14-10-2018 DA442_05700 19100c71a5b9fa6cdc50a8195e9246b3 435 SUPERFAMILY SSF46589 1 114 2.93E-27 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 DA442_05700 19100c71a5b9fa6cdc50a8195e9246b3 435 PIRSF PIRSF001529 1 435 1.3E-186 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DA442_05700 19100c71a5b9fa6cdc50a8195e9246b3 435 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 109 2.1E-29 T 14-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 DA442_05700 19100c71a5b9fa6cdc50a8195e9246b3 435 PRINTS PR00981 Seryl-tRNA synthetase signature 327 340 2.1E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DA442_05700 19100c71a5b9fa6cdc50a8195e9246b3 435 PRINTS PR00981 Seryl-tRNA synthetase signature 344 360 2.1E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DA442_05700 19100c71a5b9fa6cdc50a8195e9246b3 435 PRINTS PR00981 Seryl-tRNA synthetase signature 275 287 2.1E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DA442_05700 19100c71a5b9fa6cdc50a8195e9246b3 435 PRINTS PR00981 Seryl-tRNA synthetase signature 287 300 2.1E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DA442_05700 19100c71a5b9fa6cdc50a8195e9246b3 435 PRINTS PR00981 Seryl-tRNA synthetase signature 362 378 2.1E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DA442_05700 19100c71a5b9fa6cdc50a8195e9246b3 435 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 428 8.3E-172 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DA442_05700 19100c71a5b9fa6cdc50a8195e9246b3 435 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 228 411 2.5E-35 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DA442_05700 19100c71a5b9fa6cdc50a8195e9246b3 435 Gene3D G3DSA:3.30.930.10 107 434 7.2E-113 T 14-10-2018 DA442_05700 19100c71a5b9fa6cdc50a8195e9246b3 435 Gene3D G3DSA:1.10.287.40 1 106 1.9E-20 T 14-10-2018 DA442_01815 5b85aac706a389ac7ecb564daf975a52 269 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 264 55.427 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 DA442_01815 5b85aac706a389ac7ecb564daf975a52 269 Gene3D G3DSA:1.10.8.100 200 267 1.8E-24 T 14-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 DA442_01815 5b85aac706a389ac7ecb564daf975a52 269 Gene3D G3DSA:3.40.50.150 1 198 1.7E-65 T 14-10-2018 DA442_01815 5b85aac706a389ac7ecb564daf975a52 269 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 264 3.1E-77 T 14-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm DA442_01815 5b85aac706a389ac7ecb564daf975a52 269 SMART SM00650 25 197 4.9E-89 T 14-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 DA442_01815 5b85aac706a389ac7ecb564daf975a52 269 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 14-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 DA442_01815 5b85aac706a389ac7ecb564daf975a52 269 SUPERFAMILY SSF53335 8 267 8.92E-80 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_01815 5b85aac706a389ac7ecb564daf975a52 269 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 10 263 5.4E-88 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 DA442_19750 cd2088e1c5fec2863010f1c6760e74d8 854 Gene3D G3DSA:3.50.50.60 110 246 4.0E-82 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_19750 cd2088e1c5fec2863010f1c6760e74d8 854 PRINTS PR00397 Sirohaem Fe-binding site signature 680 698 7.3E-6 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DA442_19750 cd2088e1c5fec2863010f1c6760e74d8 854 PRINTS PR00397 Sirohaem Fe-binding site signature 637 655 7.3E-6 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DA442_19750 cd2088e1c5fec2863010f1c6760e74d8 854 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 801 0.0 T 14-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 DA442_19750 cd2088e1c5fec2863010f1c6760e74d8 854 SUPERFAMILY SSF56014 634 808 1.44E-46 T 14-10-2018 DA442_19750 cd2088e1c5fec2863010f1c6760e74d8 854 Gene3D G3DSA:3.50.50.60 7 283 4.0E-82 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_19750 cd2088e1c5fec2863010f1c6760e74d8 854 SUPERFAMILY SSF51905 3 184 1.3E-39 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_19750 cd2088e1c5fec2863010f1c6760e74d8 854 Pfam PF04324 BFD-like [2Fe-2S] binding domain 424 472 2.2E-14 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain DA442_19750 cd2088e1c5fec2863010f1c6760e74d8 854 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 634 768 9.7E-15 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DA442_19750 cd2088e1c5fec2863010f1c6760e74d8 854 SUPERFAMILY SSF55124 503 630 1.74E-30 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DA442_19750 cd2088e1c5fec2863010f1c6760e74d8 854 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 680 696 - T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DA442_19750 cd2088e1c5fec2863010f1c6760e74d8 854 PIRSF PIRSF037149 1 836 0.0 T 14-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 DA442_19750 cd2088e1c5fec2863010f1c6760e74d8 854 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 1.7E-15 T 14-10-2018 DA442_19750 cd2088e1c5fec2863010f1c6760e74d8 854 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 1.7E-15 T 14-10-2018 DA442_19750 cd2088e1c5fec2863010f1c6760e74d8 854 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 1.7E-15 T 14-10-2018 DA442_19750 cd2088e1c5fec2863010f1c6760e74d8 854 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 1.7E-15 T 14-10-2018 DA442_19750 cd2088e1c5fec2863010f1c6760e74d8 854 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.7E-15 T 14-10-2018 DA442_19750 cd2088e1c5fec2863010f1c6760e74d8 854 Gene3D G3DSA:1.10.10.1100 424 478 2.3E-12 T 14-10-2018 DA442_19750 cd2088e1c5fec2863010f1c6760e74d8 854 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 105 114 1.1E-10 T 14-10-2018 DA442_19750 cd2088e1c5fec2863010f1c6760e74d8 854 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 1.1E-10 T 14-10-2018 DA442_19750 cd2088e1c5fec2863010f1c6760e74d8 854 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 1.1E-10 T 14-10-2018 DA442_19750 cd2088e1c5fec2863010f1c6760e74d8 854 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 1.1E-10 T 14-10-2018 DA442_19750 cd2088e1c5fec2863010f1c6760e74d8 854 Gene3D G3DSA:3.30.413.10 632 793 2.2E-31 T 14-10-2018 DA442_19750 cd2088e1c5fec2863010f1c6760e74d8 854 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 561 622 1.5E-9 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DA442_19750 cd2088e1c5fec2863010f1c6760e74d8 854 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 286 5.0E-53 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DA442_19750 cd2088e1c5fec2863010f1c6760e74d8 854 SUPERFAMILY SSF51905 144 310 9.07E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_16495 4d9b63c6d48d61d1d55db2cfdbbdf69a 530 Gene3D G3DSA:3.40.140.20 219 375 2.8E-58 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DA442_16495 4d9b63c6d48d61d1d55db2cfdbbdf69a 530 SUPERFAMILY SSF53927 222 530 7.92E-131 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 DA442_16495 4d9b63c6d48d61d1d55db2cfdbbdf69a 530 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 530 1.3E-260 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DA442_16495 4d9b63c6d48d61d1d55db2cfdbbdf69a 530 SUPERFAMILY SSF52335 7 197 5.63E-72 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily DA442_16495 4d9b63c6d48d61d1d55db2cfdbbdf69a 530 PIRSF PIRSF000414 1 530 1.2E-228 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DA442_16495 4d9b63c6d48d61d1d55db2cfdbbdf69a 530 SMART SM00798 137 462 2.4E-219 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DA442_16495 4d9b63c6d48d61d1d55db2cfdbbdf69a 530 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 461 3.4E-120 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DA442_16495 4d9b63c6d48d61d1d55db2cfdbbdf69a 530 Gene3D G3DSA:3.40.140.20 394 530 2.2E-60 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DA442_16495 4d9b63c6d48d61d1d55db2cfdbbdf69a 530 Pfam PF02142 MGS-like domain 19 132 1.2E-31 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain DA442_16495 4d9b63c6d48d61d1d55db2cfdbbdf69a 530 SMART SM00851 19 132 2.0E-61 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain DA442_16495 4d9b63c6d48d61d1d55db2cfdbbdf69a 530 Gene3D G3DSA:3.40.50.1380 1 200 1.7E-87 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily DA442_16495 4d9b63c6d48d61d1d55db2cfdbbdf69a 530 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 530 45.935 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DA442_13940 2483fe8df5eed506d6969fd5545983e9 662 Gene3D G3DSA:3.40.50.300 140 326 3.0E-70 T 14-10-2018 DA442_13940 2483fe8df5eed506d6969fd5545983e9 662 SUPERFAMILY SSF140990 406 600 3.14E-76 T 14-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 DA442_13940 2483fe8df5eed506d6969fd5545983e9 662 ProSitePatterns PS00674 AAA-protein family signature. 295 313 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 DA442_13940 2483fe8df5eed506d6969fd5545983e9 662 Pfam PF06480 FtsH Extracellular 8 97 1.0E-11 T 14-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 DA442_13940 2483fe8df5eed506d6969fd5545983e9 662 Pfam PF01434 Peptidase family M41 386 595 1.3E-82 T 14-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 DA442_13940 2483fe8df5eed506d6969fd5545983e9 662 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 192 324 5.3E-46 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DA442_13940 2483fe8df5eed506d6969fd5545983e9 662 Gene3D G3DSA:1.10.8.60 327 400 2.1E-27 T 14-10-2018 DA442_13940 2483fe8df5eed506d6969fd5545983e9 662 SMART SM00382 188 327 5.1E-26 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_13940 2483fe8df5eed506d6969fd5545983e9 662 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 634 37.392 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 DA442_13940 2483fe8df5eed506d6969fd5545983e9 662 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 105 597 5.6E-244 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 DA442_13940 2483fe8df5eed506d6969fd5545983e9 662 Gene3D G3DSA:1.20.58.760 401 605 2.4E-73 T 14-10-2018 DA442_13940 2483fe8df5eed506d6969fd5545983e9 662 SUPERFAMILY SSF52540 147 395 9.77E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_13940 2483fe8df5eed506d6969fd5545983e9 662 Gene3D G3DSA:2.40.50.920 27 103 3.5E-29 T 14-10-2018 DA442_10895 1ee8ec9ac8a2ebbb0c7b174db868d7a0 92 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 35 43 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 DA442_10895 1ee8ec9ac8a2ebbb0c7b174db868d7a0 92 SUPERFAMILY SSF54292 3 81 1.23E-18 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DA442_10895 1ee8ec9ac8a2ebbb0c7b174db868d7a0 92 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 74 1.6E-9 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DA442_10895 1ee8ec9ac8a2ebbb0c7b174db868d7a0 92 Gene3D G3DSA:3.10.20.30 2 89 6.6E-16 T 14-10-2018 IPR012675 Beta-grasp domain superfamily DA442_25770 0de2bda6fc7c3e1a1c999602163e6664 427 Gene3D G3DSA:3.10.450.350 66 158 3.8E-33 T 14-10-2018 DA442_25770 0de2bda6fc7c3e1a1c999602163e6664 427 Pfam PF04225 Opacity-associated protein A LysM-like domain 73 154 3.1E-6 T 14-10-2018 IPR007340 Opacity-associated protein A DA442_25770 0de2bda6fc7c3e1a1c999602163e6664 427 SUPERFAMILY SSF51261 143 390 7.32E-69 T 14-10-2018 IPR011055 Duplicated hybrid motif DA442_25770 0de2bda6fc7c3e1a1c999602163e6664 427 Gene3D G3DSA:2.70.70.10 265 395 5.9E-50 T 14-10-2018 IPR011055 Duplicated hybrid motif DA442_25770 0de2bda6fc7c3e1a1c999602163e6664 427 Pfam PF01551 Peptidase family M23 295 388 9.7E-33 T 14-10-2018 IPR016047 Peptidase M23 DA442_25770 0de2bda6fc7c3e1a1c999602163e6664 427 Gene3D G3DSA:3.10.450.350 160 264 3.1E-33 T 14-10-2018 DA442_00985 c72d4990e2cf36802e1fbe2ea44d48bb 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 1.6E-23 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DA442_00985 c72d4990e2cf36802e1fbe2ea44d48bb 238 Gene3D G3DSA:3.30.230.70 13 238 3.8E-63 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DA442_00985 c72d4990e2cf36802e1fbe2ea44d48bb 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 4.0E-111 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 DA442_00985 c72d4990e2cf36802e1fbe2ea44d48bb 238 SUPERFAMILY SSF54211 1 181 3.44E-45 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DA442_00985 c72d4990e2cf36802e1fbe2ea44d48bb 238 Pfam PF03725 3' exoribonuclease family, domain 2 159 222 2.1E-10 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DA442_00985 c72d4990e2cf36802e1fbe2ea44d48bb 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 14-10-2018 IPR018336 Ribonuclease PH, conserved site DA442_00985 c72d4990e2cf36802e1fbe2ea44d48bb 238 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 43.798 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 DA442_00985 c72d4990e2cf36802e1fbe2ea44d48bb 238 SUPERFAMILY SSF55666 153 236 3.01E-25 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DA442_18980 1601f5538a344af53f6048a2aa7ce00d 265 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 59 153 1.3E-25 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DA442_18980 1601f5538a344af53f6048a2aa7ce00d 265 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 258 1.2E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DA442_18980 1601f5538a344af53f6048a2aa7ce00d 265 SUPERFAMILY SSF161098 60 245 4.97E-45 T 14-10-2018 IPR035906 MetI-like superfamily DA442_18980 1601f5538a344af53f6048a2aa7ce00d 265 Gene3D G3DSA:1.10.3720.10 50 260 1.8E-53 T 14-10-2018 IPR035906 MetI-like superfamily DA442_17505 625359bdc1ecc30e97ba780b77e29dd9 257 Pfam PF13614 AAA domain 2 178 3.6E-62 T 14-10-2018 IPR025669 AAA domain DA442_17505 625359bdc1ecc30e97ba780b77e29dd9 257 SUPERFAMILY SSF52540 2 254 4.12E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_17505 625359bdc1ecc30e97ba780b77e29dd9 257 Gene3D G3DSA:3.40.50.300 1 255 2.0E-76 T 14-10-2018 DA442_17505 625359bdc1ecc30e97ba780b77e29dd9 257 PIRSF PIRSF009320 88 251 1.2E-9 T 14-10-2018 DA442_17505 625359bdc1ecc30e97ba780b77e29dd9 257 PIRSF PIRSF009320 2 52 7.8E-14 T 14-10-2018 DA442_08860 777d629a2f0b25953268f784d77ff84e 433 TIGRFAM TIGR02500 type_III_yscD: type III secretion apparatus protein, YscD/HrpQ family 4 422 1.2E-127 T 14-10-2018 IPR012843 Type III secretion system YscD/HrpQ DA442_08860 777d629a2f0b25953268f784d77ff84e 433 Gene3D G3DSA:3.30.70.1770 296 357 5.0E-8 T 14-10-2018 DA442_08860 777d629a2f0b25953268f784d77ff84e 433 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 7 98 2.8E-19 T 14-10-2018 IPR032030 YscD, cytoplasmic domain DA442_08860 777d629a2f0b25953268f784d77ff84e 433 Pfam PF16693 Inner membrane component of T3SS, periplasmic domain 170 422 8.9E-128 T 14-10-2018 IPR032034 Yop protein translocation protein D, periplasmic domain DA442_08860 777d629a2f0b25953268f784d77ff84e 433 Gene3D G3DSA:2.60.200.20 1 121 8.1E-12 T 14-10-2018 DA442_24270 a336de5cc0e656d961f4ef8ec8ff04e3 184 Pfam PF12464 Maltose acetyltransferase 6 55 1.8E-11 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 DA442_24270 a336de5cc0e656d961f4ef8ec8ff04e3 184 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 126 159 2.5E-9 T 14-10-2018 IPR001451 Hexapeptide repeat DA442_24270 a336de5cc0e656d961f4ef8ec8ff04e3 184 SMART SM01266 4 56 1.1E-14 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 DA442_24270 a336de5cc0e656d961f4ef8ec8ff04e3 184 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 135 163 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DA442_24270 a336de5cc0e656d961f4ef8ec8ff04e3 184 SUPERFAMILY SSF51161 2 183 8.59E-44 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily DA442_24270 a336de5cc0e656d961f4ef8ec8ff04e3 184 Gene3D G3DSA:2.160.10.10 1 184 5.2E-64 T 14-10-2018 DA442_01895 d413887ec0a97a5091597dc86e78a338 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 396 545 1.9E-50 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 DA442_01895 d413887ec0a97a5091597dc86e78a338 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 173 2.6E-59 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 DA442_01895 d413887ec0a97a5091597dc86e78a338 574 SUPERFAMILY SSF52467 191 364 8.66E-64 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DA442_01895 d413887ec0a97a5091597dc86e78a338 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 331 6.2E-47 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 DA442_01895 d413887ec0a97a5091597dc86e78a338 574 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 433 452 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 DA442_01895 d413887ec0a97a5091597dc86e78a338 574 Gene3D G3DSA:3.40.50.1220 192 363 4.1E-60 T 14-10-2018 DA442_01895 d413887ec0a97a5091597dc86e78a338 574 Gene3D G3DSA:3.40.50.970 366 574 6.7E-66 T 14-10-2018 DA442_01895 d413887ec0a97a5091597dc86e78a338 574 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 5 569 9.2E-273 T 14-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 DA442_01895 d413887ec0a97a5091597dc86e78a338 574 Gene3D G3DSA:3.40.50.970 1 183 1.8E-73 T 14-10-2018 DA442_01895 d413887ec0a97a5091597dc86e78a338 574 SUPERFAMILY SSF52518 2 181 8.84E-65 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DA442_01895 d413887ec0a97a5091597dc86e78a338 574 SUPERFAMILY SSF52518 372 567 3.99E-68 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DA442_00855 31b6dfdeff52eba56df1887a51c23424 135 Gene3D G3DSA:3.30.420.270 61 129 8.2E-10 T 14-10-2018 DA442_00855 31b6dfdeff52eba56df1887a51c23424 135 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 133 2.8E-32 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 DA442_20170 fa765333ee20e6f1148cc038129e0d52 932 SUPERFAMILY SSF50692 599 740 1.24E-23 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily DA442_20170 fa765333ee20e6f1148cc038129e0d52 932 Pfam PF04324 BFD-like [2Fe-2S] binding domain 862 911 7.4E-12 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain DA442_20170 fa765333ee20e6f1148cc038129e0d52 932 PIRSF PIRSF036643 35 759 5.3E-128 T 14-10-2018 DA442_20170 fa765333ee20e6f1148cc038129e0d52 932 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 52 96 1.9E-12 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DA442_20170 fa765333ee20e6f1148cc038129e0d52 932 Gene3D G3DSA:3.40.50.740 114 561 9.6E-157 T 14-10-2018 DA442_20170 fa765333ee20e6f1148cc038129e0d52 932 Pfam PF00384 Molybdopterin oxidoreductase 100 527 8.0E-78 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DA442_20170 fa765333ee20e6f1148cc038129e0d52 932 Gene3D G3DSA:3.40.228.10 180 383 9.6E-157 T 14-10-2018 DA442_20170 fa765333ee20e6f1148cc038129e0d52 932 Gene3D G3DSA:2.40.40.20 621 748 1.2E-22 T 14-10-2018 DA442_20170 fa765333ee20e6f1148cc038129e0d52 932 Gene3D G3DSA:1.10.10.1100 862 917 1.2E-13 T 14-10-2018 DA442_20170 fa765333ee20e6f1148cc038129e0d52 932 SMART SM00926 48 97 4.2E-10 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DA442_20170 fa765333ee20e6f1148cc038129e0d52 932 SUPERFAMILY SSF53706 52 611 3.8E-168 T 14-10-2018 DA442_20170 fa765333ee20e6f1148cc038129e0d52 932 Gene3D G3DSA:2.20.25.90 51 96 6.0E-11 T 14-10-2018 DA442_20170 fa765333ee20e6f1148cc038129e0d52 932 Pfam PF01568 Molydopterin dinucleotide binding domain 625 735 2.9E-18 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 DA442_03015 abdea2976a3ea9f5450c38a3795c4764 301 SUPERFAMILY SSF46785 4 117 1.09E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_03015 abdea2976a3ea9f5450c38a3795c4764 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 68 8.6E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_03015 abdea2976a3ea9f5450c38a3795c4764 301 Gene3D G3DSA:3.40.190.10 98 297 7.9E-54 T 14-10-2018 DA442_03015 abdea2976a3ea9f5450c38a3795c4764 301 Gene3D G3DSA:3.40.190.10 168 269 7.9E-54 T 14-10-2018 DA442_03015 abdea2976a3ea9f5450c38a3795c4764 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.7E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_03015 abdea2976a3ea9f5450c38a3795c4764 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.7E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_03015 abdea2976a3ea9f5450c38a3795c4764 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.7E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_03015 abdea2976a3ea9f5450c38a3795c4764 301 Pfam PF03466 LysR substrate binding domain 96 299 5.4E-37 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_03015 abdea2976a3ea9f5450c38a3795c4764 301 Gene3D G3DSA:1.10.10.10 2 89 9.9E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_03015 abdea2976a3ea9f5450c38a3795c4764 301 SUPERFAMILY SSF53850 95 300 1.01E-34 T 14-10-2018 DA442_19285 25978b9b8ffcd1b24a704757e450a326 652 SUPERFAMILY SSF55073 489 642 1.26E-46 T 14-10-2018 IPR029787 Nucleotide cyclase DA442_19285 25978b9b8ffcd1b24a704757e450a326 652 Gene3D G3DSA:1.20.1480.50 148 237 3.5E-7 T 14-10-2018 DA442_19285 25978b9b8ffcd1b24a704757e450a326 652 SUPERFAMILY SSF158472 180 230 1.27E-7 T 14-10-2018 DA442_19285 25978b9b8ffcd1b24a704757e450a326 652 Gene3D G3DSA:3.30.70.270 477 646 1.9E-56 T 14-10-2018 DA442_19285 25978b9b8ffcd1b24a704757e450a326 652 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 480 641 1.1E-44 T 14-10-2018 IPR000160 GGDEF domain DA442_19285 25978b9b8ffcd1b24a704757e450a326 652 Pfam PF17152 Periplasmic sensor domain 37 142 9.4E-9 T 14-10-2018 IPR033417 Periplasmic sensor domain CHASE8 DA442_19285 25978b9b8ffcd1b24a704757e450a326 652 Pfam PF00990 Diguanylate cyclase, GGDEF domain 484 639 4.7E-48 T 14-10-2018 IPR000160 GGDEF domain DA442_19285 25978b9b8ffcd1b24a704757e450a326 652 Pfam PF00989 PAS fold 363 409 4.4E-7 T 14-10-2018 IPR013767 PAS fold GO:0006355 DA442_19285 25978b9b8ffcd1b24a704757e450a326 652 SUPERFAMILY SSF55785 234 349 3.81E-8 T 14-10-2018 IPR035965 PAS domain superfamily DA442_19285 25978b9b8ffcd1b24a704757e450a326 652 Pfam PF13426 PAS domain 259 349 0.0038 T 14-10-2018 IPR000014 PAS domain DA442_19285 25978b9b8ffcd1b24a704757e450a326 652 SUPERFAMILY SSF55785 347 465 9.18E-13 T 14-10-2018 IPR035965 PAS domain superfamily DA442_19285 25978b9b8ffcd1b24a704757e450a326 652 SMART SM00267 473 644 1.7E-59 T 14-10-2018 IPR000160 GGDEF domain DA442_19285 25978b9b8ffcd1b24a704757e450a326 652 Gene3D G3DSA:3.30.450.20 355 476 7.6E-13 T 14-10-2018 DA442_19285 25978b9b8ffcd1b24a704757e450a326 652 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 364 479 1.4E-11 T 14-10-2018 IPR000014 PAS domain DA442_19285 25978b9b8ffcd1b24a704757e450a326 652 SMART SM00091 359 425 9.9E-9 T 14-10-2018 IPR000014 PAS domain DA442_19285 25978b9b8ffcd1b24a704757e450a326 652 SMART SM00091 247 313 0.0012 T 14-10-2018 IPR000014 PAS domain DA442_19285 25978b9b8ffcd1b24a704757e450a326 652 Gene3D G3DSA:3.30.450.20 238 354 1.0E-7 T 14-10-2018 DA442_19285 25978b9b8ffcd1b24a704757e450a326 652 Pfam PF00672 HAMP domain 180 229 1.8E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_19285 25978b9b8ffcd1b24a704757e450a326 652 SMART SM00304 180 233 2.0E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_15675 ccd163fb2e3fc3e42d416fa483af6efa 334 SUPERFAMILY SSF51735 1 168 2.22E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_15675 ccd163fb2e3fc3e42d416fa483af6efa 334 SUPERFAMILY SSF55347 154 308 1.44E-50 T 14-10-2018 DA442_15675 ccd163fb2e3fc3e42d416fa483af6efa 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 167 311 1.5E-14 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DA442_15675 ccd163fb2e3fc3e42d416fa483af6efa 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 14-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DA442_15675 ccd163fb2e3fc3e42d416fa483af6efa 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 3.2E-118 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DA442_15675 ccd163fb2e3fc3e42d416fa483af6efa 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 37.781 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DA442_15675 ccd163fb2e3fc3e42d416fa483af6efa 334 SMART SM00859 3 146 2.9E-44 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DA442_15675 ccd163fb2e3fc3e42d416fa483af6efa 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 145 1.1E-32 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DA442_15675 ccd163fb2e3fc3e42d416fa483af6efa 334 Gene3D G3DSA:3.40.50.720 6 329 1.1E-119 T 14-10-2018 DA442_15675 ccd163fb2e3fc3e42d416fa483af6efa 334 Gene3D G3DSA:3.30.360.10 153 312 1.1E-119 T 14-10-2018 DA442_02225 04ae05ff14e3b85d23d2f460fc023209 354 Pfam PF13365 Trypsin-like peptidase domain 82 215 7.4E-33 T 14-10-2018 DA442_02225 04ae05ff14e3b85d23d2f460fc023209 354 SUPERFAMILY SSF50156 239 346 6.05E-20 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 DA442_02225 04ae05ff14e3b85d23d2f460fc023209 354 Gene3D G3DSA:2.40.10.10 143 255 1.4E-35 T 14-10-2018 DA442_02225 04ae05ff14e3b85d23d2f460fc023209 354 Gene3D G3DSA:2.30.42.10 256 354 1.8E-23 T 14-10-2018 DA442_02225 04ae05ff14e3b85d23d2f460fc023209 354 Gene3D G3DSA:2.40.10.10 31 142 2.7E-33 T 14-10-2018 DA442_02225 04ae05ff14e3b85d23d2f460fc023209 354 SMART SM00228 256 338 4.9E-6 T 14-10-2018 IPR001478 PDZ domain GO:0005515 DA442_02225 04ae05ff14e3b85d23d2f460fc023209 354 SUPERFAMILY SSF50494 43 265 5.06E-62 T 14-10-2018 IPR009003 Peptidase S1, PA clan DA442_02225 04ae05ff14e3b85d23d2f460fc023209 354 PRINTS PR00834 HtrA/DegQ protease family signature 186 203 1.2E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DA442_02225 04ae05ff14e3b85d23d2f460fc023209 354 PRINTS PR00834 HtrA/DegQ protease family signature 91 103 1.2E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DA442_02225 04ae05ff14e3b85d23d2f460fc023209 354 PRINTS PR00834 HtrA/DegQ protease family signature 296 308 1.2E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DA442_02225 04ae05ff14e3b85d23d2f460fc023209 354 PRINTS PR00834 HtrA/DegQ protease family signature 112 132 1.2E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DA442_02225 04ae05ff14e3b85d23d2f460fc023209 354 PRINTS PR00834 HtrA/DegQ protease family signature 152 176 1.2E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DA442_02225 04ae05ff14e3b85d23d2f460fc023209 354 PRINTS PR00834 HtrA/DegQ protease family signature 208 225 1.2E-46 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DA442_02225 04ae05ff14e3b85d23d2f460fc023209 354 Pfam PF13180 PDZ domain 257 346 4.1E-14 T 14-10-2018 IPR001478 PDZ domain GO:0005515 DA442_02225 04ae05ff14e3b85d23d2f460fc023209 354 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 2 350 1.2E-166 T 14-10-2018 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 DA442_08460 92fc96fe11fade9d8a23ad5e147bf3b8 306 Gene3D G3DSA:1.10.8.210 150 211 3.9E-10 T 14-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DA442_08460 92fc96fe11fade9d8a23ad5e147bf3b8 306 SUPERFAMILY SSF75615 109 208 3.79E-26 T 14-10-2018 DA442_08460 92fc96fe11fade9d8a23ad5e147bf3b8 306 Gene3D G3DSA:3.30.160.110 114 149 1.6E-14 T 14-10-2018 DA442_08460 92fc96fe11fade9d8a23ad5e147bf3b8 306 Gene3D G3DSA:3.40.50.720 1 113 1.3E-34 T 14-10-2018 DA442_08460 92fc96fe11fade9d8a23ad5e147bf3b8 306 Pfam PF10414 Sirohaem synthase dimerisation region 151 199 3.2E-13 T 14-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DA442_08460 92fc96fe11fade9d8a23ad5e147bf3b8 306 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 200 4.5E-63 T 14-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DA442_08460 92fc96fe11fade9d8a23ad5e147bf3b8 306 Pfam PF14824 Sirohaem biosynthesis protein central 120 146 2.0E-7 T 14-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DA442_08460 92fc96fe11fade9d8a23ad5e147bf3b8 306 Pfam PF13241 Putative NAD(P)-binding 6 116 2.6E-31 T 14-10-2018 DA442_08460 92fc96fe11fade9d8a23ad5e147bf3b8 306 SUPERFAMILY SSF51735 1 113 2.67E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_00085 b15b915bc994e1754efaba11c8f411e4 330 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 28 86 2.7E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_00085 b15b915bc994e1754efaba11c8f411e4 330 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.5E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_00085 b15b915bc994e1754efaba11c8f411e4 330 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 64 75 1.5E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_00085 b15b915bc994e1754efaba11c8f411e4 330 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 54 64 1.5E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_00085 b15b915bc994e1754efaba11c8f411e4 330 SUPERFAMILY SSF46785 24 105 2.27E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_00085 b15b915bc994e1754efaba11c8f411e4 330 Gene3D G3DSA:1.10.10.10 20 108 9.4E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_00085 b15b915bc994e1754efaba11c8f411e4 330 Gene3D G3DSA:3.40.190.10 110 313 9.3E-71 T 14-10-2018 DA442_00085 b15b915bc994e1754efaba11c8f411e4 330 Pfam PF03466 LysR substrate binding domain 116 316 8.4E-23 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_00085 b15b915bc994e1754efaba11c8f411e4 330 Gene3D G3DSA:3.40.190.10 189 288 9.3E-71 T 14-10-2018 DA442_00085 b15b915bc994e1754efaba11c8f411e4 330 SUPERFAMILY SSF53850 109 315 1.14E-41 T 14-10-2018 DA442_12235 e3efc7a77a600d8fd4c0ccb46d25397d 703 SUPERFAMILY SSF48179 610 703 1.36E-26 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DA442_12235 e3efc7a77a600d8fd4c0ccb46d25397d 703 Gene3D G3DSA:3.40.50.720 310 496 1.0E-57 T 14-10-2018 DA442_12235 e3efc7a77a600d8fd4c0ccb46d25397d 703 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 6 703 0.0 T 14-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DA442_12235 e3efc7a77a600d8fd4c0ccb46d25397d 703 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 312 491 1.7E-53 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DA442_12235 e3efc7a77a600d8fd4c0ccb46d25397d 703 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 1 703 53.043 T 14-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DA442_12235 e3efc7a77a600d8fd4c0ccb46d25397d 703 SUPERFAMILY SSF51735 310 491 2.09E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_12235 e3efc7a77a600d8fd4c0ccb46d25397d 703 SUPERFAMILY SSF48179 494 593 1.02E-26 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DA442_12235 e3efc7a77a600d8fd4c0ccb46d25397d 703 Gene3D G3DSA:3.90.226.10 1 307 2.4E-98 T 14-10-2018 DA442_12235 e3efc7a77a600d8fd4c0ccb46d25397d 703 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 491 516 - T 14-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DA442_12235 e3efc7a77a600d8fd4c0ccb46d25397d 703 Gene3D G3DSA:1.10.1040.50 497 698 4.3E-70 T 14-10-2018 DA442_12235 e3efc7a77a600d8fd4c0ccb46d25397d 703 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 219 4.7E-41 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 DA442_12235 e3efc7a77a600d8fd4c0ccb46d25397d 703 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 494 587 8.8E-24 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DA442_12235 e3efc7a77a600d8fd4c0ccb46d25397d 703 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 616 691 3.6E-5 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DA442_12235 e3efc7a77a600d8fd4c0ccb46d25397d 703 SUPERFAMILY SSF52096 2 303 4.47E-68 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DA442_12235 e3efc7a77a600d8fd4c0ccb46d25397d 703 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 105 125 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 DA442_00255 80cef55ffb7557fa9cdb115d98edcf02 517 SUPERFAMILY SSF53850 26 516 2.46E-129 T 14-10-2018 DA442_00255 80cef55ffb7557fa9cdb115d98edcf02 517 Gene3D G3DSA:3.90.76.10 57 165 2.6E-125 T 14-10-2018 DA442_00255 80cef55ffb7557fa9cdb115d98edcf02 517 PIRSF PIRSF002741 21 512 5.8E-93 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DA442_00255 80cef55ffb7557fa9cdb115d98edcf02 517 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 67 424 1.8E-86 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain DA442_00255 80cef55ffb7557fa9cdb115d98edcf02 517 Gene3D G3DSA:3.40.190.10 32 278 2.6E-125 T 14-10-2018 DA442_00255 80cef55ffb7557fa9cdb115d98edcf02 517 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 72 93 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site DA442_00255 80cef55ffb7557fa9cdb115d98edcf02 517 Gene3D G3DSA:3.10.105.10 279 494 2.6E-125 T 14-10-2018 DA442_19625 c0f8c3f2bf870fa010eca26edf21ffd5 464 SUPERFAMILY SSF103473 17 445 2.62E-58 T 14-10-2018 IPR036259 MFS transporter superfamily DA442_19625 c0f8c3f2bf870fa010eca26edf21ffd5 464 PIRSF PIRSF002808 9 461 3.9E-108 T 14-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 DA442_19625 c0f8c3f2bf870fa010eca26edf21ffd5 464 Pfam PF07690 Major Facilitator Superfamily 35 396 7.1E-34 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DA442_19625 c0f8c3f2bf870fa010eca26edf21ffd5 464 Gene3D G3DSA:1.20.1250.20 246 459 4.2E-37 T 14-10-2018 DA442_19625 c0f8c3f2bf870fa010eca26edf21ffd5 464 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 426 7.2E-139 T 14-10-2018 DA442_19625 c0f8c3f2bf870fa010eca26edf21ffd5 464 Gene3D G3DSA:1.20.1250.20 28 230 9.4E-34 T 14-10-2018 DA442_19625 c0f8c3f2bf870fa010eca26edf21ffd5 464 ProSitePatterns PS00942 glpT family of transporters signature. 156 172 - T 14-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 DA442_15920 d86873025b996ea215ad63c45d8800fd 141 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 128 4.0E-37 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type DA442_15920 d86873025b996ea215ad63c45d8800fd 141 Pfam PF02082 Transcriptional regulator 1 82 6.5E-24 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type DA442_15920 d86873025b996ea215ad63c45d8800fd 141 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 14-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site DA442_15920 d86873025b996ea215ad63c45d8800fd 141 Hamap MF_01177 HTH-type transcriptional repressor NsrR [nsrR]. 1 141 44.924 T 14-10-2018 IPR023761 Transcriptional repressor HTH, NsrR GO:0045892 DA442_15920 d86873025b996ea215ad63c45d8800fd 141 Gene3D G3DSA:1.10.10.10 1 136 5.5E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_15920 d86873025b996ea215ad63c45d8800fd 141 SUPERFAMILY SSF46785 2 131 4.69E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_03940 ee63c743025416a3c57dda3bf6b1d420 157 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 6.5E-60 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC DA442_03940 ee63c743025416a3c57dda3bf6b1d420 157 Gene3D G3DSA:3.90.960.10 1 157 4.4E-59 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DA442_03940 ee63c743025416a3c57dda3bf6b1d420 157 SUPERFAMILY SSF55826 2 156 9.42E-44 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DA442_03940 ee63c743025416a3c57dda3bf6b1d420 157 Pfam PF04073 Aminoacyl-tRNA editing domain 32 146 3.3E-26 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 DA442_03940 ee63c743025416a3c57dda3bf6b1d420 157 PIRSF PIRSF006181 1 157 4.8E-54 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC DA442_22260 a0e4f3db78247f350df9f5da49e1bbef 309 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 3 298 4.9E-96 T 14-10-2018 DA442_22260 a0e4f3db78247f350df9f5da49e1bbef 309 Pfam PF04055 Radical SAM superfamily 20 247 2.6E-21 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DA442_22260 a0e4f3db78247f350df9f5da49e1bbef 309 Gene3D G3DSA:3.20.20.70 1 74 2.7E-14 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_22260 a0e4f3db78247f350df9f5da49e1bbef 309 Gene3D G3DSA:3.20.20.70 99 305 5.8E-56 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_22260 a0e4f3db78247f350df9f5da49e1bbef 309 PIRSF PIRSF000371 1 309 9.6E-119 T 14-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 DA442_22260 a0e4f3db78247f350df9f5da49e1bbef 309 ProSitePatterns PS01087 Radical activating enzymes signature. 13 34 - T 14-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 DA442_22260 a0e4f3db78247f350df9f5da49e1bbef 309 SUPERFAMILY SSF102114 135 275 6.28E-16 T 14-10-2018 DA442_22260 a0e4f3db78247f350df9f5da49e1bbef 309 Pfam PF13353 4Fe-4S single cluster domain 12 162 4.2E-11 T 14-10-2018 DA442_07860 339b39626e2df91a2dfe263573cdeeea 412 SUPERFAMILY SSF53448 64 342 3.94E-34 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DA442_07860 339b39626e2df91a2dfe263573cdeeea 412 Gene3D G3DSA:3.90.550.10 64 279 3.0E-23 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DA442_07860 339b39626e2df91a2dfe263573cdeeea 412 Pfam PF13641 Glycosyltransferase like family 2 74 294 4.2E-19 T 14-10-2018 DA442_11505 fa7d2a0101ba3800e2c70d69776052ab 245 SUPERFAMILY SSF51735 5 244 6.1E-87 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_11505 fa7d2a0101ba3800e2c70d69776052ab 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 216 3.5E-5 T 14-10-2018 DA442_11505 fa7d2a0101ba3800e2c70d69776052ab 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 242 7.0E-67 T 14-10-2018 DA442_11505 fa7d2a0101ba3800e2c70d69776052ab 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 8.6E-53 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_11505 fa7d2a0101ba3800e2c70d69776052ab 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 8.6E-53 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_11505 fa7d2a0101ba3800e2c70d69776052ab 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 8.6E-53 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_11505 fa7d2a0101ba3800e2c70d69776052ab 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 8.6E-53 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_11505 fa7d2a0101ba3800e2c70d69776052ab 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 8.6E-53 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_11505 fa7d2a0101ba3800e2c70d69776052ab 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 8.6E-53 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_11505 fa7d2a0101ba3800e2c70d69776052ab 245 Gene3D G3DSA:3.40.50.720 1 245 1.1E-88 T 14-10-2018 DA442_11505 fa7d2a0101ba3800e2c70d69776052ab 245 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 9 243 4.9E-100 T 14-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DA442_11505 fa7d2a0101ba3800e2c70d69776052ab 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 5.6E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_11505 fa7d2a0101ba3800e2c70d69776052ab 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 5.6E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_11505 fa7d2a0101ba3800e2c70d69776052ab 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 5.6E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_11505 fa7d2a0101ba3800e2c70d69776052ab 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DA442_16980 59bbb14fbf237ac1f20bfca77c4bc977 842 Pfam PF12633 Adenylate cyclase NT domain 7 198 4.5E-77 T 14-10-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 DA442_16980 59bbb14fbf237ac1f20bfca77c4bc977 842 PIRSF PIRSF001444 1 842 0.0 T 14-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 DA442_16980 59bbb14fbf237ac1f20bfca77c4bc977 842 Pfam PF01295 Adenylate cyclase, class-I 226 828 1.1E-255 T 14-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 DA442_01685 63b22c8f132df1a5600dd4eecf8b4827 120 Pfam PF10973 Protein of unknown function (DUF2799) 29 112 3.9E-19 T 14-10-2018 IPR021242 Protein of unknown function DUF2799 DA442_12755 f9367b699e56fd136055aef672bb63b6 166 PIRSF PIRSF002094 1 166 5.6E-41 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 DA442_12755 f9367b699e56fd136055aef672bb63b6 166 SUPERFAMILY SSF111384 23 166 1.57E-31 T 14-10-2018 DA442_12755 f9367b699e56fd136055aef672bb63b6 166 Pfam PF03938 Outer membrane protein (OmpH-like) 10 165 5.6E-27 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 DA442_12755 f9367b699e56fd136055aef672bb63b6 166 Gene3D G3DSA:3.30.910.20 22 166 2.1E-34 T 14-10-2018 IPR024930 Skp domain superfamily DA442_12755 f9367b699e56fd136055aef672bb63b6 166 SMART SM00935 12 166 9.1E-43 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 DA442_25635 d26f836582b9ce1a88e691669e8dbaf3 543 Gene3D G3DSA:1.10.287.950 210 543 1.8E-77 T 14-10-2018 DA442_25635 d26f836582b9ce1a88e691669e8dbaf3 543 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 172 5.4E-18 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain DA442_25635 d26f836582b9ce1a88e691669e8dbaf3 543 SMART SM00283 280 541 1.6E-77 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_25635 d26f836582b9ce1a88e691669e8dbaf3 543 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 508 1.3E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_25635 d26f836582b9ce1a88e691669e8dbaf3 543 SMART SM00304 211 265 0.0074 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_25635 d26f836582b9ce1a88e691669e8dbaf3 543 SUPERFAMILY SSF58104 232 542 2.09E-75 T 14-10-2018 DA442_25635 d26f836582b9ce1a88e691669e8dbaf3 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 407 436 1.2E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DA442_25635 d26f836582b9ce1a88e691669e8dbaf3 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 378 405 1.2E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DA442_25635 d26f836582b9ce1a88e691669e8dbaf3 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 301 330 1.2E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DA442_08275 2c68392cbaa27e8e44488a90b37d919d 206 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 9 186 1.1E-81 T 14-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO DA442_08275 2c68392cbaa27e8e44488a90b37d919d 206 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 9 188 1.4E-80 T 14-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO DA442_08275 2c68392cbaa27e8e44488a90b37d919d 206 SUPERFAMILY SSF46626 21 202 3.32E-27 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_08275 2c68392cbaa27e8e44488a90b37d919d 206 Gene3D G3DSA:1.10.760.10 46 206 3.5E-71 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_07520 2ed1450f07f809c62d4b4e7b4db71475 543 Gene3D G3DSA:1.10.8.60 383 463 7.2E-21 T 14-10-2018 DA442_07520 2ed1450f07f809c62d4b4e7b4db71475 543 SUPERFAMILY SSF55781 10 179 4.58E-14 T 14-10-2018 DA442_07520 2ed1450f07f809c62d4b4e7b4db71475 543 Pfam PF02954 Bacterial regulatory protein, Fis family 499 537 7.7E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DA442_07520 2ed1450f07f809c62d4b4e7b4db71475 543 Pfam PF00158 Sigma-54 interaction domain 213 377 2.8E-69 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DA442_07520 2ed1450f07f809c62d4b4e7b4db71475 543 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 297 312 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DA442_07520 2ed1450f07f809c62d4b4e7b4db71475 543 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 503 520 3.6E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DA442_07520 2ed1450f07f809c62d4b4e7b4db71475 543 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 520 540 3.6E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DA442_07520 2ed1450f07f809c62d4b4e7b4db71475 543 SMART SM00382 231 378 7.4E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_07520 2ed1450f07f809c62d4b4e7b4db71475 543 SUPERFAMILY SSF46689 490 540 1.39E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_07520 2ed1450f07f809c62d4b4e7b4db71475 543 Pfam PF13185 GAF domain 26 148 2.5E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 DA442_07520 2ed1450f07f809c62d4b4e7b4db71475 543 Gene3D G3DSA:3.40.50.300 196 382 8.5E-62 T 14-10-2018 DA442_07520 2ed1450f07f809c62d4b4e7b4db71475 543 SUPERFAMILY SSF52540 214 450 1.27E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_07520 2ed1450f07f809c62d4b4e7b4db71475 543 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 235 248 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DA442_07520 2ed1450f07f809c62d4b4e7b4db71475 543 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 425 434 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site DA442_07520 2ed1450f07f809c62d4b4e7b4db71475 543 Gene3D G3DSA:1.10.10.60 478 541 8.5E-14 T 14-10-2018 DA442_07520 2ed1450f07f809c62d4b4e7b4db71475 543 Gene3D G3DSA:3.30.450.40 4 173 2.5E-15 T 14-10-2018 IPR029016 GAF-like domain superfamily DA442_25135 a7d4ee38b3a06cb2bd520d61d6cb4628 334 Gene3D G3DSA:1.10.10.60 223 333 2.5E-22 T 14-10-2018 DA442_25135 a7d4ee38b3a06cb2bd520d61d6cb4628 334 SUPERFAMILY SSF46689 280 327 1.12E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_25135 a7d4ee38b3a06cb2bd520d61d6cb4628 334 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 20 202 1.9E-22 T 14-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal DA442_25135 a7d4ee38b3a06cb2bd520d61d6cb4628 334 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 296 311 1.2E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DA442_25135 a7d4ee38b3a06cb2bd520d61d6cb4628 334 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 311 327 1.2E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DA442_25135 a7d4ee38b3a06cb2bd520d61d6cb4628 334 Pfam PF12833 Helix-turn-helix domain 251 327 3.9E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_25135 a7d4ee38b3a06cb2bd520d61d6cb4628 334 SMART SM00342 245 327 1.5E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_01455 7703d6b3dfa4abef62e1870fd3fc0451 232 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.529 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 DA442_01455 7703d6b3dfa4abef62e1870fd3fc0451 232 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.5E-40 T 14-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01455 7703d6b3dfa4abef62e1870fd3fc0451 232 SMART SM00322 60 125 7.7E-8 T 14-10-2018 IPR004087 K Homology domain GO:0003676 DA442_01455 7703d6b3dfa4abef62e1870fd3fc0451 232 SUPERFAMILY SSF54814 2 106 3.4E-36 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 DA442_01455 7703d6b3dfa4abef62e1870fd3fc0451 232 SUPERFAMILY SSF54821 108 206 1.57E-39 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01455 7703d6b3dfa4abef62e1870fd3fc0451 232 Gene3D G3DSA:3.30.1140.32 108 208 3.6E-44 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01455 7703d6b3dfa4abef62e1870fd3fc0451 232 Gene3D G3DSA:3.30.300.20 17 107 1.1E-28 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta DA442_01455 7703d6b3dfa4abef62e1870fd3fc0451 232 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 14-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01455 7703d6b3dfa4abef62e1870fd3fc0451 232 Pfam PF07650 KH domain 38 111 1.5E-18 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01455 7703d6b3dfa4abef62e1870fd3fc0451 232 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 9.5E-97 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 DA442_17385 e1d0c67260555257e3f8ccdc573b1186 200 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 DA442_17385 e1d0c67260555257e3f8ccdc573b1186 200 Pfam PF01323 DSBA-like thioredoxin domain 41 189 3.0E-29 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 DA442_17385 e1d0c67260555257e3f8ccdc573b1186 200 SUPERFAMILY SSF52833 20 197 1.6E-44 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_17385 e1d0c67260555257e3f8ccdc573b1186 200 Gene3D G3DSA:3.40.30.10 17 200 4.3E-55 T 14-10-2018 DA442_17385 e1d0c67260555257e3f8ccdc573b1186 200 PIRSF PIRSF001488 1 200 1.6E-70 T 14-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL DA442_06850 fc63619bec113b4645bf624a0440c2fa 373 Pfam PF08402 TOBE domain 283 361 8.8E-16 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 DA442_06850 fc63619bec113b4645bf624a0440c2fa 373 SMART SM00382 34 217 1.2E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_06850 fc63619bec113b4645bf624a0440c2fa 373 Gene3D G3DSA:3.40.50.300 2 244 1.7E-77 T 14-10-2018 DA442_06850 fc63619bec113b4645bf624a0440c2fa 373 Pfam PF00005 ABC transporter 26 167 6.7E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_06850 fc63619bec113b4645bf624a0440c2fa 373 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 40 358 1.9E-117 T 14-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 DA442_06850 fc63619bec113b4645bf624a0440c2fa 373 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_06850 fc63619bec113b4645bf624a0440c2fa 373 Gene3D G3DSA:2.40.50.100 286 347 9.2E-8 T 14-10-2018 DA442_06850 fc63619bec113b4645bf624a0440c2fa 373 Gene3D G3DSA:2.40.50.140 245 285 9.2E-8 T 14-10-2018 DA442_06850 fc63619bec113b4645bf624a0440c2fa 373 SUPERFAMILY SSF52540 9 246 2.59E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_06850 fc63619bec113b4645bf624a0440c2fa 373 SUPERFAMILY SSF50331 242 361 9.14E-19 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DA442_17630 122864f015b9f9e1968da1fa4ef83d3d 223 Gene3D G3DSA:1.10.3720.10 1 222 1.1E-52 T 14-10-2018 IPR035906 MetI-like superfamily DA442_17630 122864f015b9f9e1968da1fa4ef83d3d 223 SUPERFAMILY SSF161098 13 203 2.75E-43 T 14-10-2018 IPR035906 MetI-like superfamily DA442_17630 122864f015b9f9e1968da1fa4ef83d3d 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 112 1.5E-24 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DA442_17630 122864f015b9f9e1968da1fa4ef83d3d 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 217 2.3E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DA442_25140 acb7a457ec1cb06a5b4e41e14818287d 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.1E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_25140 acb7a457ec1cb06a5b4e41e14818287d 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.1E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_25140 acb7a457ec1cb06a5b4e41e14818287d 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.1E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_25140 acb7a457ec1cb06a5b4e41e14818287d 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.1E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_25140 acb7a457ec1cb06a5b4e41e14818287d 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 1.1E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_25140 acb7a457ec1cb06a5b4e41e14818287d 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.1E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_25140 acb7a457ec1cb06a5b4e41e14818287d 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DA442_25140 acb7a457ec1cb06a5b4e41e14818287d 253 Gene3D G3DSA:3.40.50.720 4 245 8.2E-66 T 14-10-2018 DA442_25140 acb7a457ec1cb06a5b4e41e14818287d 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 244 1.2E-50 T 14-10-2018 DA442_25140 acb7a457ec1cb06a5b4e41e14818287d 253 SUPERFAMILY SSF51735 5 244 1.44E-62 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_25140 acb7a457ec1cb06a5b4e41e14818287d 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.2E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_25140 acb7a457ec1cb06a5b4e41e14818287d 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.2E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_25140 acb7a457ec1cb06a5b4e41e14818287d 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.2E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_05475 61c3c9c0b4c2f0383f599d0c26a03a5e 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 16 240 9.4E-117 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 DA442_05475 61c3c9c0b4c2f0383f599d0c26a03a5e 334 Gene3D G3DSA:3.40.50.300 25 186 2.1E-40 T 14-10-2018 DA442_05475 61c3c9c0b4c2f0383f599d0c26a03a5e 334 Gene3D G3DSA:1.10.10.10 262 334 4.3E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_05475 61c3c9c0b4c2f0383f599d0c26a03a5e 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 258 331 1.6E-33 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 DA442_05475 61c3c9c0b4c2f0383f599d0c26a03a5e 334 SMART SM00382 56 183 4.0E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_05475 61c3c9c0b4c2f0383f599d0c26a03a5e 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 255 332 5.0E-39 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 DA442_05475 61c3c9c0b4c2f0383f599d0c26a03a5e 334 SUPERFAMILY SSF46785 262 332 1.9E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_05475 61c3c9c0b4c2f0383f599d0c26a03a5e 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 28 331 2.6E-147 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 DA442_05475 61c3c9c0b4c2f0383f599d0c26a03a5e 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 182.514 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 DA442_05475 61c3c9c0b4c2f0383f599d0c26a03a5e 334 Gene3D G3DSA:1.10.8.60 187 260 4.8E-31 T 14-10-2018 DA442_05475 61c3c9c0b4c2f0383f599d0c26a03a5e 334 SUPERFAMILY SSF52540 25 256 7.04E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_15900 f8860ce18b67ec08ee8d30cf356fe4f5 338 Pfam PF00579 tRNA synthetases class I (W and Y) 3 289 6.3E-77 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 DA442_15900 f8860ce18b67ec08ee8d30cf356fe4f5 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 5.1E-26 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DA442_15900 f8860ce18b67ec08ee8d30cf356fe4f5 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 198 208 5.1E-26 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DA442_15900 f8860ce18b67ec08ee8d30cf356fe4f5 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 5.1E-26 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DA442_15900 f8860ce18b67ec08ee8d30cf356fe4f5 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 5.1E-26 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DA442_15900 f8860ce18b67ec08ee8d30cf356fe4f5 338 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 334 1.4E-107 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DA442_15900 f8860ce18b67ec08ee8d30cf356fe4f5 338 Gene3D G3DSA:1.10.240.10 191 304 9.7E-139 T 14-10-2018 DA442_15900 f8860ce18b67ec08ee8d30cf356fe4f5 338 SUPERFAMILY SSF52374 5 334 1.84E-90 T 14-10-2018 DA442_15900 f8860ce18b67ec08ee8d30cf356fe4f5 338 Gene3D G3DSA:3.40.50.620 5 333 9.7E-139 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DA442_15900 f8860ce18b67ec08ee8d30cf356fe4f5 338 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 335 40.749 T 14-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 DA442_25045 c7549d2838a647bfd92634831be3f4ff 373 Gene3D G3DSA:1.10.287.470 107 180 1.3E-56 T 14-10-2018 DA442_25045 c7549d2838a647bfd92634831be3f4ff 373 SUPERFAMILY SSF111369 63 236 1.44E-19 T 14-10-2018 DA442_25045 c7549d2838a647bfd92634831be3f4ff 373 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 72 272 7.7E-15 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DA442_25045 c7549d2838a647bfd92634831be3f4ff 373 Gene3D G3DSA:2.40.420.20 51 363 1.3E-56 T 14-10-2018 DA442_25045 c7549d2838a647bfd92634831be3f4ff 373 Gene3D G3DSA:2.40.50.100 73 219 1.3E-56 T 14-10-2018 DA442_25045 c7549d2838a647bfd92634831be3f4ff 373 Gene3D G3DSA:2.40.30.170 58 294 1.3E-56 T 14-10-2018 DA442_25045 c7549d2838a647bfd92634831be3f4ff 373 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 49 363 4.4E-54 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DA442_16100 ae31bdc448c73792b5db819da1c363a5 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 75 95 1.5E-38 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 DA442_16100 ae31bdc448c73792b5db819da1c363a5 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 99 121 1.5E-38 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 DA442_16100 ae31bdc448c73792b5db819da1c363a5 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 125 143 1.5E-38 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 DA442_16100 ae31bdc448c73792b5db819da1c363a5 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 15 32 1.5E-38 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 DA442_16100 ae31bdc448c73792b5db819da1c363a5 154 Gene3D G3DSA:3.10.420.10 3 154 2.7E-58 T 14-10-2018 IPR035958 SecB-like superfamily DA442_16100 ae31bdc448c73792b5db819da1c363a5 154 Pfam PF02556 Preprotein translocase subunit SecB 7 146 1.4E-55 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 DA442_16100 ae31bdc448c73792b5db819da1c363a5 154 Hamap MF_00821 Protein-export protein SecB [secB]. 1 147 32.171 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 DA442_16100 ae31bdc448c73792b5db819da1c363a5 154 SUPERFAMILY SSF54611 4 143 4.8E-52 T 14-10-2018 IPR035958 SecB-like superfamily DA442_16100 ae31bdc448c73792b5db819da1c363a5 154 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 8 146 1.2E-59 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 DA442_10770 82fc924503c3da6db8c46eea05e55348 362 Gene3D G3DSA:3.40.190.170 38 348 3.1E-117 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily DA442_10770 82fc924503c3da6db8c46eea05e55348 362 Gene3D G3DSA:3.40.190.10 156 327 3.1E-117 T 14-10-2018 DA442_10770 82fc924503c3da6db8c46eea05e55348 362 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 40 327 2.2E-69 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 DA442_10770 82fc924503c3da6db8c46eea05e55348 362 PIRSF PIRSF039026 4 362 6.3E-142 T 14-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like DA442_22825 d8648fa4e4d16f154b459a78b9311b81 152 SUPERFAMILY SSF46785 13 151 2.58E-35 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_22825 d8648fa4e4d16f154b459a78b9311b81 152 Gene3D G3DSA:1.10.10.10 11 152 4.0E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_22825 d8648fa4e4d16f154b459a78b9311b81 152 SMART SM00347 39 137 1.6E-24 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DA442_22825 d8648fa4e4d16f154b459a78b9311b81 152 Pfam PF01047 MarR family 46 103 2.0E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DA442_22825 d8648fa4e4d16f154b459a78b9311b81 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 80 95 2.1E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DA442_22825 d8648fa4e4d16f154b459a78b9311b81 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 79 2.1E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DA442_22825 d8648fa4e4d16f154b459a78b9311b81 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 99 115 2.1E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DA442_18910 2f701735f13b53bfb0692261ef49db6f 361 Gene3D G3DSA:1.10.287.470 103 162 1.2E-75 T 14-10-2018 DA442_18910 2f701735f13b53bfb0692261ef49db6f 361 Gene3D G3DSA:2.40.420.20 283 352 1.2E-75 T 14-10-2018 DA442_18910 2f701735f13b53bfb0692261ef49db6f 361 Pfam PF13533 Biotin-lipoyl like 72 116 1.2E-12 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain DA442_18910 2f701735f13b53bfb0692261ef49db6f 361 Gene3D G3DSA:2.40.50.100 69 201 1.2E-75 T 14-10-2018 DA442_18910 2f701735f13b53bfb0692261ef49db6f 361 Gene3D G3DSA:2.40.30.170 62 282 1.2E-75 T 14-10-2018 DA442_18910 2f701735f13b53bfb0692261ef49db6f 361 SUPERFAMILY SSF111369 61 278 3.14E-32 T 14-10-2018 DA442_18910 2f701735f13b53bfb0692261ef49db6f 361 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 45 355 1.8E-72 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DA442_18910 2f701735f13b53bfb0692261ef49db6f 361 Pfam PF13437 HlyD family secretion protein 166 267 7.1E-12 T 14-10-2018 DA442_16465 43a38a507f79df15ee5237d69e115783 711 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 14 124 1.2E-28 T 14-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 DA442_16465 43a38a507f79df15ee5237d69e115783 711 Gene3D G3DSA:3.40.50.2300 1 129 1.1E-52 T 14-10-2018 DA442_16465 43a38a507f79df15ee5237d69e115783 711 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 545 1.6E-189 T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 DA442_16465 43a38a507f79df15ee5237d69e115783 711 SUPERFAMILY SSF53383 130 562 3.02E-106 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_16465 43a38a507f79df15ee5237d69e115783 711 PIRSF PIRSF009393 1 711 8.9E-289 T 14-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 DA442_16465 43a38a507f79df15ee5237d69e115783 711 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 570 700 1.9E-46 T 14-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 DA442_16465 43a38a507f79df15ee5237d69e115783 711 SUPERFAMILY SSF55904 568 708 4.45E-43 T 14-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 DA442_16465 43a38a507f79df15ee5237d69e115783 711 Gene3D G3DSA:3.90.100.10 595 711 2.4E-46 T 14-10-2018 DA442_16465 43a38a507f79df15ee5237d69e115783 711 Gene3D G3DSA:3.40.640.10 130 424 4.0E-91 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_16465 43a38a507f79df15ee5237d69e115783 711 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 DA442_16465 43a38a507f79df15ee5237d69e115783 711 Gene3D G3DSA:3.90.1150.10 425 594 9.3E-71 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DA442_05410 8719bb4c84e9d476c18b3f9f74c24c63 1487 Gene3D G3DSA:1.20.58.850 583 853 4.0E-135 T 14-10-2018 DA442_05410 8719bb4c84e9d476c18b3f9f74c24c63 1487 Pfam PF04310 MukB N-terminal 2 227 8.3E-122 T 14-10-2018 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 DA442_05410 8719bb4c84e9d476c18b3f9f74c24c63 1487 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1337 1425 1.2E-14 T 14-10-2018 DA442_05410 8719bb4c84e9d476c18b3f9f74c24c63 1487 Gene3D G3DSA:1.20.58.850 621 831 4.0E-135 T 14-10-2018 DA442_05410 8719bb4c84e9d476c18b3f9f74c24c63 1487 SUPERFAMILY SSF52540 26 224 1.02E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_05410 8719bb4c84e9d476c18b3f9f74c24c63 1487 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 1 1472 10.924 T 14-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 DA442_05410 8719bb4c84e9d476c18b3f9f74c24c63 1487 Gene3D G3DSA:3.40.1140.10 1383 1469 2.2E-38 T 14-10-2018 DA442_05410 8719bb4c84e9d476c18b3f9f74c24c63 1487 Gene3D G3DSA:3.40.1140.10 1 227 2.7E-98 T 14-10-2018 DA442_05410 8719bb4c84e9d476c18b3f9f74c24c63 1487 Pfam PF16330 MukB hinge domain 647 811 3.2E-73 T 14-10-2018 IPR032520 MukB, hinge domain DA442_05410 8719bb4c84e9d476c18b3f9f74c24c63 1487 Gene3D G3DSA:1.20.1060.30 668 779 4.0E-135 T 14-10-2018 DA442_05410 8719bb4c84e9d476c18b3f9f74c24c63 1487 PIRSF PIRSF005246 1 1487 0.0 T 14-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 DA442_07305 05c2bcd941a45fd02261700826dfb2a2 393 Gene3D G3DSA:2.40.160.50 104 391 2.3E-15 T 14-10-2018 DA442_07305 05c2bcd941a45fd02261700826dfb2a2 393 Pfam PF01103 Surface antigen 107 393 6.7E-10 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 DA442_25875 6d32f9cf7aae54f92a80a69d48bc3665 294 Pfam PF00510 Cytochrome c oxidase subunit III 8 293 4.8E-49 T 14-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_25875 6d32f9cf7aae54f92a80a69d48bc3665 294 Gene3D G3DSA:1.20.120.80 79 294 7.0E-62 T 14-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_25875 6d32f9cf7aae54f92a80a69d48bc3665 294 SUPERFAMILY SSF81452 4 294 4.19E-78 T 14-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_25875 6d32f9cf7aae54f92a80a69d48bc3665 294 Gene3D G3DSA:1.10.287.70 1 78 4.6E-17 T 14-10-2018 DA442_21010 8ef67e9f60519f448016bc183c367570 216 SUPERFAMILY SSF46785 90 173 4.35E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_21010 8ef67e9f60519f448016bc183c367570 216 Pfam PF04337 Protein of unknown function, DUF480 5 158 8.3E-66 T 14-10-2018 IPR007432 Protein of unknown function DUF480 DA442_21010 8ef67e9f60519f448016bc183c367570 216 SUPERFAMILY SSF46785 2 84 8.71E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_21010 8ef67e9f60519f448016bc183c367570 216 Gene3D G3DSA:1.10.10.10 1 90 1.3E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_21010 8ef67e9f60519f448016bc183c367570 216 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 216 35.766 T 14-10-2018 IPR007432 Protein of unknown function DUF480 DA442_21010 8ef67e9f60519f448016bc183c367570 216 Gene3D G3DSA:1.10.10.10 95 175 5.6E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_21300 ef8e4f171f70e146030d5069400385ce 70 SUPERFAMILY SSF50249 3 69 5.57E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_21300 ef8e4f171f70e146030d5069400385ce 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 1.3E-28 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DA442_21300 ef8e4f171f70e146030d5069400385ce 70 PIRSF PIRSF002599 1 70 1.3E-24 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 DA442_21300 ef8e4f171f70e146030d5069400385ce 70 Gene3D G3DSA:2.40.50.140 2 69 5.3E-29 T 14-10-2018 DA442_21300 ef8e4f171f70e146030d5069400385ce 70 PRINTS PR00050 Cold shock protein signature 28 37 3.0E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DA442_21300 ef8e4f171f70e146030d5069400385ce 70 PRINTS PR00050 Cold shock protein signature 43 61 3.0E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DA442_21300 ef8e4f171f70e146030d5069400385ce 70 PRINTS PR00050 Cold shock protein signature 7 22 3.0E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DA442_21300 ef8e4f171f70e146030d5069400385ce 70 SMART SM00357 6 70 2.8E-29 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 DA442_02340 7c74ceddcf2229970735aea8ea3f64fd 493 SUPERFAMILY SSF53244 338 489 2.09E-48 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DA442_02340 7c74ceddcf2229970735aea8ea3f64fd 493 Gene3D G3DSA:3.40.1190.10 108 339 1.2E-79 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DA442_02340 7c74ceddcf2229970735aea8ea3f64fd 493 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 5 489 33.775 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 DA442_02340 7c74ceddcf2229970735aea8ea3f64fd 493 Gene3D G3DSA:3.40.1390.10 4 106 1.6E-25 T 14-10-2018 DA442_02340 7c74ceddcf2229970735aea8ea3f64fd 493 Pfam PF08245 Mur ligase middle domain 115 316 2.2E-50 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DA442_02340 7c74ceddcf2229970735aea8ea3f64fd 493 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 25 489 4.2E-169 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 DA442_02340 7c74ceddcf2229970735aea8ea3f64fd 493 Pfam PF01225 Mur ligase family, catalytic domain 26 102 3.5E-11 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 DA442_02340 7c74ceddcf2229970735aea8ea3f64fd 493 Gene3D G3DSA:3.90.190.20 340 491 8.8E-54 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DA442_02340 7c74ceddcf2229970735aea8ea3f64fd 493 Pfam PF02875 Mur ligase family, glutamate ligase domain 339 419 6.5E-24 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 DA442_02340 7c74ceddcf2229970735aea8ea3f64fd 493 SUPERFAMILY SSF63418 11 105 2.22E-21 T 14-10-2018 IPR035911 MurE/MurF, N-terminal DA442_02340 7c74ceddcf2229970735aea8ea3f64fd 493 SUPERFAMILY SSF53623 109 336 7.98E-73 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DA442_14660 f94d50ae7da3304dcfc8873c250a9e5d 410 SUPERFAMILY SSF55021 338 409 6.49E-18 T 14-10-2018 DA442_14660 f94d50ae7da3304dcfc8873c250a9e5d 410 Gene3D G3DSA:3.40.50.720 14 312 4.4E-111 T 14-10-2018 DA442_14660 f94d50ae7da3304dcfc8873c250a9e5d 410 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DA442_14660 f94d50ae7da3304dcfc8873c250a9e5d 410 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 326 1.2E-38 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 DA442_14660 f94d50ae7da3304dcfc8873c250a9e5d 410 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 7.2E-53 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 DA442_14660 f94d50ae7da3304dcfc8873c250a9e5d 410 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 DA442_14660 f94d50ae7da3304dcfc8873c250a9e5d 410 SUPERFAMILY SSF52283 7 136 1.4E-49 T 14-10-2018 DA442_14660 f94d50ae7da3304dcfc8873c250a9e5d 410 Gene3D G3DSA:3.30.70.260 328 409 1.5E-32 T 14-10-2018 DA442_14660 f94d50ae7da3304dcfc8873c250a9e5d 410 Gene3D G3DSA:3.40.50.720 109 297 4.4E-111 T 14-10-2018 DA442_14660 f94d50ae7da3304dcfc8873c250a9e5d 410 SUPERFAMILY SSF51735 108 295 7.81E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_14660 f94d50ae7da3304dcfc8873c250a9e5d 410 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DA442_06455 be677324153b4f3063c077cf98d64db8 562 SUPERFAMILY SSF51735 268 559 2.33E-96 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_06455 be677324153b4f3063c077cf98d64db8 562 ProSitePatterns PS00331 Malic enzymes signature. 264 280 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 DA442_06455 be677324153b4f3063c077cf98d64db8 562 SMART SM01274 78 258 1.5E-107 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 DA442_06455 be677324153b4f3063c077cf98d64db8 562 SUPERFAMILY SSF53223 4 267 7.91E-110 T 14-10-2018 DA442_06455 be677324153b4f3063c077cf98d64db8 562 Pfam PF03949 Malic enzyme, NAD binding domain 268 528 6.6E-104 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 DA442_06455 be677324153b4f3063c077cf98d64db8 562 SMART SM00919 268 528 3.6E-134 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 DA442_06455 be677324153b4f3063c077cf98d64db8 562 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 1 562 73.083 T 14-10-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38|MetaCyc: PWY-6339 DA442_06455 be677324153b4f3063c077cf98d64db8 562 Pfam PF00390 Malic enzyme, N-terminal domain 78 258 8.3E-78 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 DA442_06455 be677324153b4f3063c077cf98d64db8 562 Gene3D G3DSA:3.40.50.720 266 562 2.9E-110 T 14-10-2018 DA442_06455 be677324153b4f3063c077cf98d64db8 562 PRINTS PR00072 Malic enzyme signature 144 173 1.3E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DA442_06455 be677324153b4f3063c077cf98d64db8 562 PRINTS PR00072 Malic enzyme signature 180 202 1.3E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DA442_06455 be677324153b4f3063c077cf98d64db8 562 PRINTS PR00072 Malic enzyme signature 405 421 1.3E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DA442_06455 be677324153b4f3063c077cf98d64db8 562 PRINTS PR00072 Malic enzyme signature 264 280 1.3E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DA442_06455 be677324153b4f3063c077cf98d64db8 562 PRINTS PR00072 Malic enzyme signature 84 108 1.3E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DA442_06455 be677324153b4f3063c077cf98d64db8 562 PRINTS PR00072 Malic enzyme signature 295 311 1.3E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DA442_06455 be677324153b4f3063c077cf98d64db8 562 PRINTS PR00072 Malic enzyme signature 239 257 1.3E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DA442_06455 be677324153b4f3063c077cf98d64db8 562 Gene3D G3DSA:3.40.50.10380 13 265 1.4E-114 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 DA442_06455 be677324153b4f3063c077cf98d64db8 562 PIRSF PIRSF000106 2 560 7.5E-226 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DA442_25410 86ab03b2bef9bb425b8413a89d2df9e4 760 Pfam PF13208 TerB N-terminal domain 96 300 1.1E-43 T 14-10-2018 IPR025266 TerB, N-terminal DA442_25410 86ab03b2bef9bb425b8413a89d2df9e4 760 Gene3D G3DSA:1.10.3680.10 497 615 1.7E-13 T 14-10-2018 IPR029024 TerB-like DA442_25410 86ab03b2bef9bb425b8413a89d2df9e4 760 Pfam PF15615 TerB-C domain 637 759 8.5E-21 T 14-10-2018 IPR028932 TerB-C domain DA442_25410 86ab03b2bef9bb425b8413a89d2df9e4 760 SUPERFAMILY SSF158682 500 620 4.58E-17 T 14-10-2018 IPR029024 TerB-like DA442_25410 86ab03b2bef9bb425b8413a89d2df9e4 760 Pfam PF05099 Tellurite resistance protein TerB 508 612 4.4E-10 T 14-10-2018 IPR007791 Co-chaperone DjlA, N-terminal DA442_16275 23b772d69d8a683f19d6a0a92306293a 613 Pfam PF11412 Disulphide bond corrector protein DsbC 41 151 7.4E-29 T 14-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain DA442_16275 23b772d69d8a683f19d6a0a92306293a 613 SUPERFAMILY SSF52833 508 611 7.94E-23 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_16275 23b772d69d8a683f19d6a0a92306293a 613 ProSitePatterns PS00194 Thioredoxin family active site. 522 540 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 DA442_16275 23b772d69d8a683f19d6a0a92306293a 613 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 613 38.558 T 14-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 DA442_16275 23b772d69d8a683f19d6a0a92306293a 613 SUPERFAMILY SSF74863 39 153 3.4E-40 T 14-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily DA442_16275 23b772d69d8a683f19d6a0a92306293a 613 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 222 422 5.1E-18 T 14-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 DA442_16275 23b772d69d8a683f19d6a0a92306293a 613 Gene3D G3DSA:2.60.40.1250 35 168 9.2E-40 T 14-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily DA442_16275 23b772d69d8a683f19d6a0a92306293a 613 Pfam PF13899 Thioredoxin-like 503 584 1.4E-13 T 14-10-2018 DA442_16275 23b772d69d8a683f19d6a0a92306293a 613 Gene3D G3DSA:3.40.30.10 487 613 1.2E-34 T 14-10-2018 DA442_12170 7eb5db47e4ffde77cc1c66c5f480be88 672 SUPERFAMILY SSF51905 266 663 3.43E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_12170 7eb5db47e4ffde77cc1c66c5f480be88 672 Gene3D G3DSA:3.40.50.150 7 253 3.7E-109 T 14-10-2018 DA442_12170 7eb5db47e4ffde77cc1c66c5f480be88 672 Pfam PF01266 FAD dependent oxidoreductase 266 636 9.4E-45 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DA442_12170 7eb5db47e4ffde77cc1c66c5f480be88 672 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 116 242 1.4E-47 T 14-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 DA442_12170 7eb5db47e4ffde77cc1c66c5f480be88 672 Gene3D G3DSA:3.50.50.60 265 663 2.6E-132 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_12170 7eb5db47e4ffde77cc1c66c5f480be88 672 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 266 666 3.2E-154 T 14-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 DA442_12170 7eb5db47e4ffde77cc1c66c5f480be88 672 Gene3D G3DSA:3.30.9.10 349 573 2.6E-132 T 14-10-2018 DA442_12170 7eb5db47e4ffde77cc1c66c5f480be88 672 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 5 661 27.832 T 14-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 DA442_17335 b70092dd15aa24b3186c3188c1e6e2f0 427 Pfam PF01029 NusB family 1 123 2.1E-24 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 DA442_17335 b70092dd15aa24b3186c3188c1e6e2f0 427 Gene3D G3DSA:1.10.940.10 1 142 9.1E-45 T 14-10-2018 IPR035926 NusB-like superfamily DA442_17335 b70092dd15aa24b3186c3188c1e6e2f0 427 SUPERFAMILY SSF53335 139 424 1.67E-78 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_17335 b70092dd15aa24b3186c3188c1e6e2f0 427 Gene3D G3DSA:3.40.50.150 228 425 8.8E-71 T 14-10-2018 DA442_17335 b70092dd15aa24b3186c3188c1e6e2f0 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 219 233 2.3E-30 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DA442_17335 b70092dd15aa24b3186c3188c1e6e2f0 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 248 258 2.3E-30 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DA442_17335 b70092dd15aa24b3186c3188c1e6e2f0 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 407 424 2.3E-30 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DA442_17335 b70092dd15aa24b3186c3188c1e6e2f0 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 314 326 2.3E-30 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DA442_17335 b70092dd15aa24b3186c3188c1e6e2f0 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 364 380 2.3E-30 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DA442_17335 b70092dd15aa24b3186c3188c1e6e2f0 427 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 313 324 - T 14-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 DA442_17335 b70092dd15aa24b3186c3188c1e6e2f0 427 Gene3D G3DSA:3.30.70.1170 170 227 6.3E-27 T 14-10-2018 DA442_17335 b70092dd15aa24b3186c3188c1e6e2f0 427 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 4 424 3.5E-153 T 14-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 DA442_17335 b70092dd15aa24b3186c3188c1e6e2f0 427 Pfam PF01189 16S rRNA methyltransferase RsmB/F 238 422 5.4E-69 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 DA442_17335 b70092dd15aa24b3186c3188c1e6e2f0 427 SUPERFAMILY SSF48013 1 146 1.96E-36 T 14-10-2018 IPR035926 NusB-like superfamily DA442_17335 b70092dd15aa24b3186c3188c1e6e2f0 427 Gene3D G3DSA:1.10.287.730 143 169 5.5E-14 T 14-10-2018 DA442_15910 6f630d4bcb631d9b17872bbe3fc694de 247 SUPERFAMILY SSF55315 3 77 1.29E-19 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like DA442_15910 6f630d4bcb631d9b17872bbe3fc694de 247 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 243 1.2E-86 T 14-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 DA442_15910 6f630d4bcb631d9b17872bbe3fc694de 247 SMART SM00967 5 81 1.6E-19 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 DA442_15910 6f630d4bcb631d9b17872bbe3fc694de 247 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 79 3.6E-19 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 DA442_15910 6f630d4bcb631d9b17872bbe3fc694de 247 Gene3D G3DSA:3.30.1330.30 1 77 8.1E-27 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like DA442_15910 6f630d4bcb631d9b17872bbe3fc694de 247 SUPERFAMILY SSF75217 69 245 4.19E-49 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases DA442_15910 6f630d4bcb631d9b17872bbe3fc694de 247 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 3 244 43.389 T 14-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB DA442_15910 6f630d4bcb631d9b17872bbe3fc694de 247 Pfam PF00588 SpoU rRNA Methylase family 97 237 1.6E-39 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 DA442_15910 6f630d4bcb631d9b17872bbe3fc694de 247 Gene3D G3DSA:3.40.1280.10 78 244 1.8E-64 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DA442_14230 3bf88cd9e5c87a479b301cf9fdef951f 887 SUPERFAMILY SSF52922 702 886 1.6E-58 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DA442_14230 3bf88cd9e5c87a479b301cf9fdef951f 887 SUPERFAMILY SSF52518 56 469 1.45E-140 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DA442_14230 3bf88cd9e5c87a479b301cf9fdef951f 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 104 298 6.5E-10 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DA442_14230 3bf88cd9e5c87a479b301cf9fdef951f 887 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 4 886 0.0 T 14-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 DA442_14230 3bf88cd9e5c87a479b301cf9fdef951f 887 Gene3D G3DSA:3.40.50.970 472 706 8.0E-111 T 14-10-2018 DA442_14230 3bf88cd9e5c87a479b301cf9fdef951f 887 Gene3D G3DSA:3.40.50.970 55 471 1.6E-133 T 14-10-2018 DA442_14230 3bf88cd9e5c87a479b301cf9fdef951f 887 Gene3D G3DSA:3.40.50.920 707 887 7.1E-71 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DA442_14230 3bf88cd9e5c87a479b301cf9fdef951f 887 SUPERFAMILY SSF52518 474 701 1.88E-98 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DA442_14230 3bf88cd9e5c87a479b301cf9fdef951f 887 PIRSF PIRSF000156 1 887 0.0 T 14-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 DA442_00830 a76d2401eced19e8d3ad5371a89cdf37 706 SUPERFAMILY SSF55021 633 703 8.74E-7 T 14-10-2018 DA442_00830 a76d2401eced19e8d3ad5371a89cdf37 706 Gene3D G3DSA:1.10.3210.10 3 190 2.7E-80 T 14-10-2018 DA442_00830 a76d2401eced19e8d3ad5371a89cdf37 706 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 27 702 2.2E-270 T 14-10-2018 IPR004811 RelA/SpoT family GO:0015969 DA442_00830 a76d2401eced19e8d3ad5371a89cdf37 706 SUPERFAMILY SSF81301 180 393 2.13E-59 T 14-10-2018 DA442_00830 a76d2401eced19e8d3ad5371a89cdf37 706 Pfam PF13291 ACT domain 627 703 4.5E-14 T 14-10-2018 IPR002912 ACT domain DA442_00830 a76d2401eced19e8d3ad5371a89cdf37 706 SUPERFAMILY SSF109604 3 190 2.54E-75 T 14-10-2018 DA442_00830 a76d2401eced19e8d3ad5371a89cdf37 706 SMART SM00471 41 153 4.3E-11 T 14-10-2018 IPR003607 HD/PDEase domain DA442_00830 a76d2401eced19e8d3ad5371a89cdf37 706 Gene3D G3DSA:3.30.460.10 193 325 2.2E-46 T 14-10-2018 DA442_00830 a76d2401eced19e8d3ad5371a89cdf37 706 Gene3D G3DSA:3.10.20.30 382 456 4.6E-29 T 14-10-2018 IPR012675 Beta-grasp domain superfamily DA442_00830 a76d2401eced19e8d3ad5371a89cdf37 706 SUPERFAMILY SSF81271 376 448 1.85E-20 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 DA442_00830 a76d2401eced19e8d3ad5371a89cdf37 706 Pfam PF13328 HD domain 28 175 5.9E-54 T 14-10-2018 IPR003607 HD/PDEase domain DA442_00830 a76d2401eced19e8d3ad5371a89cdf37 706 Pfam PF02824 TGS domain 389 447 4.9E-19 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 DA442_00830 a76d2401eced19e8d3ad5371a89cdf37 706 SMART SM00954 235 345 6.9E-59 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 DA442_00830 a76d2401eced19e8d3ad5371a89cdf37 706 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 9.3E-35 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 DA442_00830 a76d2401eced19e8d3ad5371a89cdf37 706 Gene3D G3DSA:3.30.70.260 627 706 6.2E-13 T 14-10-2018 DA442_13935 3265a6b699a22702f7dfca424817c2cb 276 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DA442_13935 3265a6b699a22702f7dfca424817c2cb 276 Gene3D G3DSA:3.20.20.20 1 275 3.2E-110 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DA442_13935 3265a6b699a22702f7dfca424817c2cb 276 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 17 271 1.7E-102 T 14-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 DA442_13935 3265a6b699a22702f7dfca424817c2cb 276 SUPERFAMILY SSF51717 2 274 1.96E-104 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DA442_13935 3265a6b699a22702f7dfca424817c2cb 276 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DA442_13935 3265a6b699a22702f7dfca424817c2cb 276 Pfam PF00809 Pterin binding enzyme 18 257 6.3E-90 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DA442_19600 0c642d19d9fd39746b30c750b0621922 567 Gene3D G3DSA:3.40.250.10 471 565 2.6E-24 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily DA442_19600 0c642d19d9fd39746b30c750b0621922 567 SUPERFAMILY SSF55424 344 467 8.25E-36 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DA442_19600 0c642d19d9fd39746b30c750b0621922 567 SUPERFAMILY SSF51905 2 197 7.13E-40 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_19600 0c642d19d9fd39746b30c750b0621922 567 SMART SM00450 473 567 2.4E-13 T 14-10-2018 IPR001763 Rhodanese-like domain DA442_19600 0c642d19d9fd39746b30c750b0621922 567 Gene3D G3DSA:3.50.50.60 3 361 2.4E-188 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_19600 0c642d19d9fd39746b30c750b0621922 567 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 328 2.2E-52 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DA442_19600 0c642d19d9fd39746b30c750b0621922 567 Gene3D G3DSA:3.50.50.60 115 461 2.4E-188 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_19600 0c642d19d9fd39746b30c750b0621922 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 8.6E-23 T 14-10-2018 DA442_19600 0c642d19d9fd39746b30c750b0621922 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 8.6E-23 T 14-10-2018 DA442_19600 0c642d19d9fd39746b30c750b0621922 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 8.6E-23 T 14-10-2018 DA442_19600 0c642d19d9fd39746b30c750b0621922 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 8.6E-23 T 14-10-2018 DA442_19600 0c642d19d9fd39746b30c750b0621922 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 272 8.6E-23 T 14-10-2018 DA442_19600 0c642d19d9fd39746b30c750b0621922 567 SUPERFAMILY SSF52821 459 563 1.05E-23 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily DA442_19600 0c642d19d9fd39746b30c750b0621922 567 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 350 451 4.7E-17 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 DA442_19600 0c642d19d9fd39746b30c750b0621922 567 SUPERFAMILY SSF51905 155 340 2.2E-28 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_19600 0c642d19d9fd39746b30c750b0621922 567 Pfam PF00581 Rhodanese-like domain 485 563 2.0E-9 T 14-10-2018 IPR001763 Rhodanese-like domain DA442_19600 0c642d19d9fd39746b30c750b0621922 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 2.2E-19 T 14-10-2018 DA442_19600 0c642d19d9fd39746b30c750b0621922 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 2.2E-19 T 14-10-2018 DA442_19600 0c642d19d9fd39746b30c750b0621922 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 153 178 2.2E-19 T 14-10-2018 DA442_19600 0c642d19d9fd39746b30c750b0621922 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 257 271 2.2E-19 T 14-10-2018 DA442_19600 0c642d19d9fd39746b30c750b0621922 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 2.2E-19 T 14-10-2018 DA442_03910 14078f37ca0498fae7e5be754e4378d8 362 Gene3D G3DSA:1.20.58.410 3 97 4.0E-9 T 14-10-2018 DA442_03910 14078f37ca0498fae7e5be754e4378d8 362 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 41.111 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 DA442_03910 14078f37ca0498fae7e5be754e4378d8 362 Pfam PF00472 RF-1 domain 218 323 8.6E-39 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 DA442_03910 14078f37ca0498fae7e5be754e4378d8 362 Pfam PF03462 PCRF domain 13 205 5.0E-78 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 DA442_03910 14078f37ca0498fae7e5be754e4378d8 362 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 DA442_03910 14078f37ca0498fae7e5be754e4378d8 362 SMART SM00937 67 180 6.8E-68 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 DA442_03910 14078f37ca0498fae7e5be754e4378d8 362 SUPERFAMILY SSF75620 12 355 1.07E-137 T 14-10-2018 DA442_03910 14078f37ca0498fae7e5be754e4378d8 362 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 360 4.7E-171 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 DA442_03910 14078f37ca0498fae7e5be754e4378d8 362 Gene3D G3DSA:3.30.70.1660 115 343 2.9E-95 T 14-10-2018 DA442_03910 14078f37ca0498fae7e5be754e4378d8 362 Gene3D G3DSA:3.30.160.20 212 293 2.9E-95 T 14-10-2018 DA442_24970 8270504905a1588dac5e413a62a0f59b 219 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 5 203 2.3E-47 T 14-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like DA442_24970 8270504905a1588dac5e413a62a0f59b 219 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 190 2.5E-21 T 14-10-2018 DA442_24970 8270504905a1588dac5e413a62a0f59b 219 Gene3D G3DSA:1.20.1440.100 17 90 1.1E-53 T 14-10-2018 DA442_24970 8270504905a1588dac5e413a62a0f59b 219 SUPERFAMILY SSF56784 1 213 5.29E-27 T 14-10-2018 IPR036412 HAD-like superfamily DA442_24970 8270504905a1588dac5e413a62a0f59b 219 Gene3D G3DSA:3.40.50.1000 6 216 1.1E-53 T 14-10-2018 IPR023214 HAD superfamily DA442_24970 8270504905a1588dac5e413a62a0f59b 219 Pfam PF12710 haloacid dehalogenase-like hydrolase 7 189 3.0E-27 T 14-10-2018 DA442_15125 c5b82f9d6e5fbd92b77d387134ee0b2b 162 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 4 152 1.2E-54 T 14-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 DA442_15125 c5b82f9d6e5fbd92b77d387134ee0b2b 162 Pfam PF02470 MlaD protein 39 118 8.1E-20 T 14-10-2018 IPR003399 Mce/MlaD DA442_06450 c04ac9e001d9cb7ed3a9f2ba1e19f4ce 244 Pfam PF02698 DUF218 domain 61 200 8.2E-22 T 14-10-2018 IPR003848 Domain of unknown function DUF218 DA442_12340 75da66169c3623530d6b623c4d0076b2 369 Pfam PF01339 CheB methylesterase 184 361 3.4E-58 T 14-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 DA442_12340 75da66169c3623530d6b623c4d0076b2 369 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 367 38.758 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 DA442_12340 75da66169c3623530d6b623c4d0076b2 369 PIRSF PIRSF000876 1 367 5.9E-128 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 DA442_12340 75da66169c3623530d6b623c4d0076b2 369 Gene3D G3DSA:3.40.50.180 176 365 1.9E-64 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal DA442_12340 75da66169c3623530d6b623c4d0076b2 369 Gene3D G3DSA:3.40.50.2300 2 130 1.7E-31 T 14-10-2018 DA442_12340 75da66169c3623530d6b623c4d0076b2 369 SUPERFAMILY SSF52172 2 109 7.83E-27 T 14-10-2018 IPR011006 CheY-like superfamily DA442_12340 75da66169c3623530d6b623c4d0076b2 369 SMART SM00448 3 126 1.2E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_12340 75da66169c3623530d6b623c4d0076b2 369 Pfam PF00072 Response regulator receiver domain 5 109 1.9E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_12340 75da66169c3623530d6b623c4d0076b2 369 SUPERFAMILY SSF52738 178 363 1.12E-62 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal DA442_19985 4cb4e06809d9fff608adf2eac5d01a1f 855 SUPERFAMILY SSF81923 11 139 3.4E-16 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 DA442_19985 4cb4e06809d9fff608adf2eac5d01a1f 855 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 844 0.0 T 14-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 DA442_19985 4cb4e06809d9fff608adf2eac5d01a1f 855 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 760 832 1.3E-9 T 14-10-2018 IPR019489 Clp ATPase, C-terminal DA442_19985 4cb4e06809d9fff608adf2eac5d01a1f 855 Gene3D G3DSA:1.10.8.60 760 853 3.3E-9 T 14-10-2018 DA442_19985 4cb4e06809d9fff608adf2eac5d01a1f 855 Gene3D G3DSA:3.40.50.300 541 757 2.9E-64 T 14-10-2018 DA442_19985 4cb4e06809d9fff608adf2eac5d01a1f 855 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 213 326 1.8E-9 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DA442_19985 4cb4e06809d9fff608adf2eac5d01a1f 855 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 304 316 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 DA442_19985 4cb4e06809d9fff608adf2eac5d01a1f 855 Pfam PF07724 AAA domain (Cdc48 subfamily) 588 753 1.8E-38 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DA442_19985 4cb4e06809d9fff608adf2eac5d01a1f 855 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 24 75 4.2E-6 T 14-10-2018 IPR004176 Clp, N-terminal DA442_19985 4cb4e06809d9fff608adf2eac5d01a1f 855 SMART SM00382 208 354 1.3E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_19985 4cb4e06809d9fff608adf2eac5d01a1f 855 SMART SM00382 588 758 2.8E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_19985 4cb4e06809d9fff608adf2eac5d01a1f 855 Gene3D G3DSA:3.40.50.300 354 535 4.3E-40 T 14-10-2018 DA442_19985 4cb4e06809d9fff608adf2eac5d01a1f 855 Gene3D G3DSA:1.10.1780.10 1 158 4.4E-34 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 DA442_19985 4cb4e06809d9fff608adf2eac5d01a1f 855 SUPERFAMILY SSF52540 537 832 9.83E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_19985 4cb4e06809d9fff608adf2eac5d01a1f 855 Gene3D G3DSA:3.40.50.300 159 352 6.9E-64 T 14-10-2018 DA442_19985 4cb4e06809d9fff608adf2eac5d01a1f 855 SUPERFAMILY SSF52540 168 499 8.94E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_19985 4cb4e06809d9fff608adf2eac5d01a1f 855 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 637 655 2.8E-31 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 DA442_19985 4cb4e06809d9fff608adf2eac5d01a1f 855 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 666 684 2.8E-31 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 DA442_19985 4cb4e06809d9fff608adf2eac5d01a1f 855 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 699 713 2.8E-31 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 DA442_19985 4cb4e06809d9fff608adf2eac5d01a1f 855 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 592 610 2.8E-31 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 DA442_19985 4cb4e06809d9fff608adf2eac5d01a1f 855 SMART SM01086 760 852 2.7E-4 T 14-10-2018 IPR019489 Clp ATPase, C-terminal DA442_05905 2511333d8275b58f81ba076ebc4939a5 164 Gene3D G3DSA:2.40.100.10 1 164 2.6E-67 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily DA442_05905 2511333d8275b58f81ba076ebc4939a5 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 DA442_05905 2511333d8275b58f81ba076ebc4939a5 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 160 5.6E-49 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DA442_05905 2511333d8275b58f81ba076ebc4939a5 164 PIRSF PIRSF001467 1 162 1.6E-28 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 DA442_05905 2511333d8275b58f81ba076ebc4939a5 164 SUPERFAMILY SSF50891 1 162 2.19E-59 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily DA442_05905 2511333d8275b58f81ba076ebc4939a5 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 5.9E-12 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DA442_05905 2511333d8275b58f81ba076ebc4939a5 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 5.9E-12 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DA442_05905 2511333d8275b58f81ba076ebc4939a5 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 5.9E-12 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DA442_04965 6fc3c087ea031cc4346dd48d5d34b5ec 154 SUPERFAMILY SSF46785 2 61 1.55E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_04965 6fc3c087ea031cc4346dd48d5d34b5ec 154 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DA442_04965 6fc3c087ea031cc4346dd48d5d34b5ec 154 Gene3D G3DSA:3.30.70.920 56 140 1.0E-20 T 14-10-2018 DA442_04965 6fc3c087ea031cc4346dd48d5d34b5ec 154 SMART SM00344 3 112 6.5E-44 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DA442_04965 6fc3c087ea031cc4346dd48d5d34b5ec 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 9.6E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DA442_04965 6fc3c087ea031cc4346dd48d5d34b5ec 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 9.6E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DA442_04965 6fc3c087ea031cc4346dd48d5d34b5ec 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 9.6E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DA442_04965 6fc3c087ea031cc4346dd48d5d34b5ec 154 SUPERFAMILY SSF54909 63 152 1.57E-19 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel DA442_04965 6fc3c087ea031cc4346dd48d5d34b5ec 154 Pfam PF01037 Lrp/AsnC ligand binding domain 70 142 2.7E-20 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DA442_04965 6fc3c087ea031cc4346dd48d5d34b5ec 154 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 8.2E-17 T 14-10-2018 DA442_04965 6fc3c087ea031cc4346dd48d5d34b5ec 154 Gene3D G3DSA:1.10.10.10 4 55 5.7E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_21065 50f6e5324ffd82ed87bfb654fa244a02 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 3.3E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_21065 50f6e5324ffd82ed87bfb654fa244a02 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 3.3E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_21065 50f6e5324ffd82ed87bfb654fa244a02 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 3.3E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_21065 50f6e5324ffd82ed87bfb654fa244a02 304 SUPERFAMILY SSF53850 88 294 3.26E-37 T 14-10-2018 DA442_21065 50f6e5324ffd82ed87bfb654fa244a02 304 SUPERFAMILY SSF46785 2 84 3.12E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_21065 50f6e5324ffd82ed87bfb654fa244a02 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 2.0E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_21065 50f6e5324ffd82ed87bfb654fa244a02 304 Gene3D G3DSA:1.10.10.10 1 86 1.2E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_21065 50f6e5324ffd82ed87bfb654fa244a02 304 Gene3D G3DSA:3.40.190.10 90 291 3.0E-48 T 14-10-2018 DA442_21065 50f6e5324ffd82ed87bfb654fa244a02 304 Gene3D G3DSA:3.40.190.10 168 267 3.0E-48 T 14-10-2018 DA442_21065 50f6e5324ffd82ed87bfb654fa244a02 304 Pfam PF03466 LysR substrate binding domain 93 295 2.7E-22 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_16245 971bc9a0cea2c7a4c7033f18766ee03a 467 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 462 1.5E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_16245 971bc9a0cea2c7a4c7033f18766ee03a 467 Pfam PF00672 HAMP domain 195 242 2.0E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_16245 971bc9a0cea2c7a4c7033f18766ee03a 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 448 461 1.2E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_16245 971bc9a0cea2c7a4c7033f18766ee03a 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 403 1.2E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_16245 971bc9a0cea2c7a4c7033f18766ee03a 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 417 1.2E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_16245 971bc9a0cea2c7a4c7033f18766ee03a 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 442 1.2E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_16245 971bc9a0cea2c7a4c7033f18766ee03a 467 Gene3D G3DSA:1.10.287.130 198 311 3.4E-33 T 14-10-2018 DA442_16245 971bc9a0cea2c7a4c7033f18766ee03a 467 Pfam PF00512 His Kinase A (phospho-acceptor) domain 249 308 3.1E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_16245 971bc9a0cea2c7a4c7033f18766ee03a 467 SMART SM00388 248 310 5.3E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_16245 971bc9a0cea2c7a4c7033f18766ee03a 467 SUPERFAMILY SSF47384 234 309 2.75E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DA442_16245 971bc9a0cea2c7a4c7033f18766ee03a 467 SUPERFAMILY SSF55874 300 462 1.83E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_16245 971bc9a0cea2c7a4c7033f18766ee03a 467 Gene3D G3DSA:3.30.565.10 313 464 9.4E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_16245 971bc9a0cea2c7a4c7033f18766ee03a 467 SMART SM00304 194 247 9.6E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_16245 971bc9a0cea2c7a4c7033f18766ee03a 467 SMART SM00387 354 464 3.3E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_16245 971bc9a0cea2c7a4c7033f18766ee03a 467 Gene3D G3DSA:3.30.450.210 36 161 2.9E-56 T 14-10-2018 IPR038515 CpxA, periplasmic domain superfamily DA442_16245 971bc9a0cea2c7a4c7033f18766ee03a 467 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 41 172 9.6E-59 T 14-10-2018 IPR032404 Two-component sensor protein CpxA, periplasmic domain DA442_15630 2376705d8378637ce05b1ca1d4765eef 338 Gene3D G3DSA:3.30.420.40 182 292 7.8E-45 T 14-10-2018 DA442_15630 2376705d8378637ce05b1ca1d4765eef 338 Gene3D G3DSA:3.30.1490.300 82 141 7.8E-45 T 14-10-2018 DA442_15630 2376705d8378637ce05b1ca1d4765eef 338 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 5 327 2.4E-73 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM DA442_15630 2376705d8378637ce05b1ca1d4765eef 338 Pfam PF11104 Type IV pilus assembly protein PilM; 8 326 1.0E-50 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM DA442_15630 2376705d8378637ce05b1ca1d4765eef 338 Gene3D G3DSA:3.30.420.40 8 325 7.8E-45 T 14-10-2018 DA442_15630 2376705d8378637ce05b1ca1d4765eef 338 PIRSF PIRSF019169 1 328 8.6E-94 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM DA442_15630 2376705d8378637ce05b1ca1d4765eef 338 SUPERFAMILY SSF53067 6 165 1.59E-6 T 14-10-2018 DA442_24055 246173b9c25fe5290a1fe4b75c70c386 721 SUPERFAMILY SSF53474 455 699 1.72E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_24055 246173b9c25fe5290a1fe4b75c70c386 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 514 538 4.4E-51 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 DA442_24055 246173b9c25fe5290a1fe4b75c70c386 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 572 592 4.4E-51 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 DA442_24055 246173b9c25fe5290a1fe4b75c70c386 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 630 645 4.4E-51 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 DA442_24055 246173b9c25fe5290a1fe4b75c70c386 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 648 670 4.4E-51 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 DA442_24055 246173b9c25fe5290a1fe4b75c70c386 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 488 506 4.4E-51 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 DA442_24055 246173b9c25fe5290a1fe4b75c70c386 721 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 542 561 4.4E-51 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 DA442_24055 246173b9c25fe5290a1fe4b75c70c386 721 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 42 443 3.1E-96 T 14-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 DA442_24055 246173b9c25fe5290a1fe4b75c70c386 721 Pfam PF00326 Prolyl oligopeptidase family 505 720 4.6E-69 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 DA442_24055 246173b9c25fe5290a1fe4b75c70c386 721 Gene3D G3DSA:2.130.10.120 111 445 3.8E-249 T 14-10-2018 DA442_24055 246173b9c25fe5290a1fe4b75c70c386 721 Gene3D G3DSA:3.40.50.1820 60 713 3.8E-249 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_24055 246173b9c25fe5290a1fe4b75c70c386 721 SUPERFAMILY SSF50993 39 451 6.02E-96 T 14-10-2018 DA442_15535 91c13c9d35166f288880bd9f769b5fb2 550 Gene3D G3DSA:3.40.50.10490 13 507 4.5E-242 T 14-10-2018 DA442_15535 91c13c9d35166f288880bd9f769b5fb2 550 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 266 279 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_15535 91c13c9d35166f288880bd9f769b5fb2 550 SUPERFAMILY SSF53697 6 548 2.72E-226 T 14-10-2018 DA442_15535 91c13c9d35166f288880bd9f769b5fb2 550 Gene3D G3DSA:1.10.1390.10 508 550 9.2E-20 T 14-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_15535 91c13c9d35166f288880bd9f769b5fb2 550 Pfam PF00342 Phosphoglucose isomerase 53 542 3.0E-255 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_15535 91c13c9d35166f288880bd9f769b5fb2 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 151 170 2.2E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_15535 91c13c9d35166f288880bd9f769b5fb2 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 262 280 2.2E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_15535 91c13c9d35166f288880bd9f769b5fb2 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 498 511 2.2E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_15535 91c13c9d35166f288880bd9f769b5fb2 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 466 484 2.2E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_15535 91c13c9d35166f288880bd9f769b5fb2 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 484 498 2.2E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_15535 91c13c9d35166f288880bd9f769b5fb2 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 339 360 2.2E-56 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_15535 91c13c9d35166f288880bd9f769b5fb2 550 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 47 525 43.181 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_15535 91c13c9d35166f288880bd9f769b5fb2 550 Gene3D G3DSA:3.40.50.10490 99 292 4.5E-242 T 14-10-2018 DA442_15535 91c13c9d35166f288880bd9f769b5fb2 550 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 498 515 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_04365 c86e3bc647cb1d6beb563a1b24d8f4fa 556 Gene3D G3DSA:3.40.50.620 30 247 2.1E-106 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DA442_04365 c86e3bc647cb1d6beb563a1b24d8f4fa 556 Gene3D G3DSA:1.10.1160.10 261 339 8.4E-37 T 14-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 DA442_04365 c86e3bc647cb1d6beb563a1b24d8f4fa 556 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 552 1.9E-299 T 14-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DA442_04365 c86e3bc647cb1d6beb563a1b24d8f4fa 556 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DA442_04365 c86e3bc647cb1d6beb563a1b24d8f4fa 556 Gene3D G3DSA:2.40.240.10 340 547 4.8E-84 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DA442_04365 c86e3bc647cb1d6beb563a1b24d8f4fa 556 SUPERFAMILY SSF52374 11 337 4.5E-104 T 14-10-2018 DA442_04365 c86e3bc647cb1d6beb563a1b24d8f4fa 556 SUPERFAMILY SSF50715 340 548 1.62E-81 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DA442_04365 c86e3bc647cb1d6beb563a1b24d8f4fa 556 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 529 5.6E-65 T 14-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DA442_04365 c86e3bc647cb1d6beb563a1b24d8f4fa 556 Gene3D G3DSA:3.90.800.10 101 209 2.1E-106 T 14-10-2018 DA442_04365 c86e3bc647cb1d6beb563a1b24d8f4fa 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 6.0E-10 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DA442_04365 c86e3bc647cb1d6beb563a1b24d8f4fa 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 6.0E-10 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DA442_04365 c86e3bc647cb1d6beb563a1b24d8f4fa 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 6.0E-10 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DA442_04365 c86e3bc647cb1d6beb563a1b24d8f4fa 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 6.0E-10 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DA442_04365 c86e3bc647cb1d6beb563a1b24d8f4fa 556 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 550 54.562 T 14-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 DA442_04365 c86e3bc647cb1d6beb563a1b24d8f4fa 556 Gene3D G3DSA:2.40.240.10 348 466 4.8E-84 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DA442_04365 c86e3bc647cb1d6beb563a1b24d8f4fa 556 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 4.1E-127 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 DA442_01695 75a1b68650bb38d6b3b73a23761e88a3 338 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 6 197 1.9E-75 T 14-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 DA442_01695 75a1b68650bb38d6b3b73a23761e88a3 338 PIRSF PIRSF500210 1 336 7.2E-130 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 DA442_01695 75a1b68650bb38d6b3b73a23761e88a3 338 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 5 333 43.15 T 14-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 DA442_01695 75a1b68650bb38d6b3b73a23761e88a3 338 SUPERFAMILY SSF56655 3 331 7.89E-115 T 14-10-2018 DA442_01695 75a1b68650bb38d6b3b73a23761e88a3 338 PIRSF PIRSF000904 1 337 4.8E-127 T 14-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 DA442_01695 75a1b68650bb38d6b3b73a23761e88a3 338 Gene3D G3DSA:3.40.190.80 200 336 1.4E-60 T 14-10-2018 DA442_01695 75a1b68650bb38d6b3b73a23761e88a3 338 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 273 285 - T 14-10-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 DA442_01695 75a1b68650bb38d6b3b73a23761e88a3 338 Gene3D G3DSA:3.30.540.10 4 198 2.4E-76 T 14-10-2018 DA442_01695 75a1b68650bb38d6b3b73a23761e88a3 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 151 174 2.8E-75 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 DA442_01695 75a1b68650bb38d6b3b73a23761e88a3 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 182 205 2.8E-75 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 DA442_01695 75a1b68650bb38d6b3b73a23761e88a3 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 307 332 2.8E-75 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 DA442_01695 75a1b68650bb38d6b3b73a23761e88a3 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 208 235 2.8E-75 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 DA442_01695 75a1b68650bb38d6b3b73a23761e88a3 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 30 57 2.8E-75 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 DA442_01695 75a1b68650bb38d6b3b73a23761e88a3 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 67 93 2.8E-75 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 DA442_17465 027b772f8cbf20af5184b09b9cba7602 288 Gene3D G3DSA:3.40.1380.10 61 207 1.1E-110 T 14-10-2018 DA442_17465 027b772f8cbf20af5184b09b9cba7602 288 Pfam PF00231 ATP synthase 5 287 1.4E-98 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_17465 027b772f8cbf20af5184b09b9cba7602 288 Gene3D G3DSA:1.10.287.80 6 284 1.1E-110 T 14-10-2018 DA442_17465 027b772f8cbf20af5184b09b9cba7602 288 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 288 1.2E-111 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_17465 027b772f8cbf20af5184b09b9cba7602 288 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 8.2E-37 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_17465 027b772f8cbf20af5184b09b9cba7602 288 PRINTS PR00126 ATP synthase gamma subunit signature 266 287 8.2E-37 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_17465 027b772f8cbf20af5184b09b9cba7602 288 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 8.2E-37 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_17465 027b772f8cbf20af5184b09b9cba7602 288 PRINTS PR00126 ATP synthase gamma subunit signature 235 254 8.2E-37 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_17465 027b772f8cbf20af5184b09b9cba7602 288 SUPERFAMILY SSF52943 2 288 3.14E-96 T 14-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_17465 027b772f8cbf20af5184b09b9cba7602 288 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 288 36.835 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_17465 027b772f8cbf20af5184b09b9cba7602 288 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 274 287 - T 14-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_24080 08db846d72424351d4733eb932c27173 142 SUPERFAMILY SSF50630 6 140 1.61E-42 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily DA442_24080 08db846d72424351d4733eb932c27173 142 Pfam PF05618 Putative ATP-dependant zinc protease 6 138 6.6E-34 T 14-10-2018 DA442_24080 08db846d72424351d4733eb932c27173 142 Gene3D G3DSA:2.40.70.10 3 133 8.4E-34 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily DA442_21615 862b5b9a440a9ba50cf08132d967d064 696 Pfam PF00593 TonB dependent receptor 232 694 6.8E-62 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DA442_21615 862b5b9a440a9ba50cf08132d967d064 696 Pfam PF07715 TonB-dependent Receptor Plug Domain 56 155 6.9E-17 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain DA442_21615 862b5b9a440a9ba50cf08132d967d064 696 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 47 - T 14-10-2018 IPR010916 TonB box, conserved site DA442_21615 862b5b9a440a9ba50cf08132d967d064 696 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 57 695 7.8E-107 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 DA442_21615 862b5b9a440a9ba50cf08132d967d064 696 Gene3D G3DSA:2.170.130.10 31 165 8.9E-32 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DA442_21615 862b5b9a440a9ba50cf08132d967d064 696 SUPERFAMILY SSF56935 32 696 1.63E-132 T 14-10-2018 DA442_21615 862b5b9a440a9ba50cf08132d967d064 696 Gene3D G3DSA:2.40.170.20 166 696 6.8E-131 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DA442_16715 8fc54995bda0de66df0a45b536e9ad2e 270 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 74 82 - T 14-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DA442_16715 8fc54995bda0de66df0a45b536e9ad2e 270 SUPERFAMILY SSF53681 8 108 1.96E-31 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DA442_16715 8fc54995bda0de66df0a45b536e9ad2e 270 Hamap MF_00258 Glutamate racemase [murI]. 7 255 32.31 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DA442_16715 8fc54995bda0de66df0a45b536e9ad2e 270 Gene3D G3DSA:3.40.50.1860 99 208 2.4E-82 T 14-10-2018 DA442_16715 8fc54995bda0de66df0a45b536e9ad2e 270 Pfam PF01177 Asp/Glu/Hydantoin racemase 11 215 7.0E-26 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DA442_16715 8fc54995bda0de66df0a45b536e9ad2e 270 Gene3D G3DSA:3.40.50.1860 11 237 2.4E-82 T 14-10-2018 DA442_16715 8fc54995bda0de66df0a45b536e9ad2e 270 TIGRFAM TIGR00067 glut_race: glutamate racemase 9 231 4.3E-68 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DA442_16715 8fc54995bda0de66df0a45b536e9ad2e 270 SUPERFAMILY SSF53681 112 261 1.2E-32 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DA442_21915 d730c9a6a4cb16149d78b4f3734381a8 543 ProSitePatterns PS00211 ABC transporters family signature. 427 441 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_21915 d730c9a6a4cb16149d78b4f3734381a8 543 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_21915 d730c9a6a4cb16149d78b4f3734381a8 543 SUPERFAMILY SSF52540 6 256 8.95E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_21915 d730c9a6a4cb16149d78b4f3734381a8 543 Pfam PF00005 ABC transporter 26 185 1.6E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_21915 d730c9a6a4cb16149d78b4f3734381a8 543 SUPERFAMILY SSF52540 294 526 2.43E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_21915 d730c9a6a4cb16149d78b4f3734381a8 543 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 264 1.2E-5 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DA442_21915 d730c9a6a4cb16149d78b4f3734381a8 543 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 506 537 0.0053 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DA442_21915 d730c9a6a4cb16149d78b4f3734381a8 543 SMART SM00382 312 504 1.6E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_21915 d730c9a6a4cb16149d78b4f3734381a8 543 SMART SM00382 35 235 1.3E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_21915 d730c9a6a4cb16149d78b4f3734381a8 543 Pfam PF00005 ABC transporter 304 455 7.4E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_21915 d730c9a6a4cb16149d78b4f3734381a8 543 Gene3D G3DSA:3.40.50.300 4 279 8.2E-81 T 14-10-2018 DA442_21915 d730c9a6a4cb16149d78b4f3734381a8 543 Gene3D G3DSA:3.40.50.300 280 535 1.7E-68 T 14-10-2018 DA442_16205 5ec6a845f2b865e8d525e47703260c67 547 SUPERFAMILY SSF52029 185 376 8.37E-84 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily DA442_16205 5ec6a845f2b865e8d525e47703260c67 547 Gene3D G3DSA:3.30.260.10 138 410 4.0E-239 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily DA442_16205 5ec6a845f2b865e8d525e47703260c67 547 SUPERFAMILY SSF54849 137 203 1.19E-23 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily DA442_16205 5ec6a845f2b865e8d525e47703260c67 547 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DA442_16205 5ec6a845f2b865e8d525e47703260c67 547 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DA442_16205 5ec6a845f2b865e8d525e47703260c67 547 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DA442_16205 5ec6a845f2b865e8d525e47703260c67 547 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DA442_16205 5ec6a845f2b865e8d525e47703260c67 547 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DA442_16205 5ec6a845f2b865e8d525e47703260c67 547 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DA442_16205 5ec6a845f2b865e8d525e47703260c67 547 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 3.0E-255 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DA442_16205 5ec6a845f2b865e8d525e47703260c67 547 Hamap MF_00600 60 kDa chaperonin [groL]. 2 544 41.581 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DA442_16205 5ec6a845f2b865e8d525e47703260c67 547 SUPERFAMILY SSF48592 7 521 3.89E-77 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily DA442_16205 5ec6a845f2b865e8d525e47703260c67 547 Gene3D G3DSA:1.10.560.10 8 521 4.0E-239 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily DA442_16205 5ec6a845f2b865e8d525e47703260c67 547 Gene3D G3DSA:3.50.7.10 173 379 4.0E-239 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily DA442_16205 5ec6a845f2b865e8d525e47703260c67 547 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 2.5E-97 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 DA442_02420 f295f38fd41f506743bba3b97791acbc 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DA442_02420 f295f38fd41f506743bba3b97791acbc 1077 Gene3D G3DSA:3.30.470.20 665 934 4.2E-124 T 14-10-2018 DA442_02420 f295f38fd41f506743bba3b97791acbc 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 8.1E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DA442_02420 f295f38fd41f506743bba3b97791acbc 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 8.1E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DA442_02420 f295f38fd41f506743bba3b97791acbc 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 8.1E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DA442_02420 f295f38fd41f506743bba3b97791acbc 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 8.1E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DA442_02420 f295f38fd41f506743bba3b97791acbc 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 8.1E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DA442_02420 f295f38fd41f506743bba3b97791acbc 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 8.1E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DA442_02420 f295f38fd41f506743bba3b97791acbc 1077 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 8.1E-64 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DA442_02420 f295f38fd41f506743bba3b97791acbc 1077 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1050 0.0 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DA442_02420 f295f38fd41f506743bba3b97791acbc 1077 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.386 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DA442_02420 f295f38fd41f506743bba3b97791acbc 1077 SUPERFAMILY SSF52440 1 127 1.87E-50 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DA442_02420 f295f38fd41f506743bba3b97791acbc 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DA442_02420 f295f38fd41f506743bba3b97791acbc 1077 Gene3D G3DSA:3.40.50.1380 937 1072 5.4E-33 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily DA442_02420 f295f38fd41f506743bba3b97791acbc 1077 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DA442_02420 f295f38fd41f506743bba3b97791acbc 1077 SUPERFAMILY SSF48108 397 554 6.8E-52 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DA442_02420 f295f38fd41f506743bba3b97791acbc 1077 SUPERFAMILY SSF56059 128 401 2.12E-108 T 14-10-2018 DA442_02420 f295f38fd41f506743bba3b97791acbc 1077 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.113 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DA442_02420 f295f38fd41f506743bba3b97791acbc 1077 Pfam PF02142 MGS-like domain 956 1041 8.5E-16 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain DA442_02420 f295f38fd41f506743bba3b97791acbc 1077 SMART SM00851 955 1041 1.3E-25 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain DA442_02420 f295f38fd41f506743bba3b97791acbc 1077 SUPERFAMILY SSF56059 673 932 4.95E-103 T 14-10-2018 DA442_02420 f295f38fd41f506743bba3b97791acbc 1077 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DA442_02420 f295f38fd41f506743bba3b97791acbc 1077 Gene3D G3DSA:3.30.470.20 119 403 3.7E-129 T 14-10-2018 DA442_02420 f295f38fd41f506743bba3b97791acbc 1077 SUPERFAMILY SSF52440 556 675 1.87E-49 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DA442_02420 f295f38fd41f506743bba3b97791acbc 1077 SMART SM01096 424 547 4.7E-76 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DA442_02420 f295f38fd41f506743bba3b97791acbc 1077 Gene3D G3DSA:3.40.50.20 554 662 2.4E-49 T 14-10-2018 DA442_02420 f295f38fd41f506743bba3b97791acbc 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 874 2.1E-37 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DA442_02420 f295f38fd41f506743bba3b97791acbc 1077 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.5E-72 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DA442_02420 f295f38fd41f506743bba3b97791acbc 1077 Gene3D G3DSA:3.40.50.20 1 116 1.1E-50 T 14-10-2018 DA442_02420 f295f38fd41f506743bba3b97791acbc 1077 SUPERFAMILY SSF52335 937 1071 3.53E-34 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily DA442_02420 f295f38fd41f506743bba3b97791acbc 1077 Gene3D G3DSA:1.10.1030.10 404 553 1.0E-52 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DA442_02420 f295f38fd41f506743bba3b97791acbc 1077 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 3.9E-41 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DA442_21695 884e77a45f24d8d5e29aa2c36b2d54eb 318 Gene3D G3DSA:1.10.8.300 199 315 1.4E-38 T 14-10-2018 DA442_21695 884e77a45f24d8d5e29aa2c36b2d54eb 318 Gene3D G3DSA:3.40.50.300 17 183 2.6E-46 T 14-10-2018 DA442_21695 884e77a45f24d8d5e29aa2c36b2d54eb 318 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 36 166 1.1E-62 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 DA442_21695 884e77a45f24d8d5e29aa2c36b2d54eb 318 SUPERFAMILY SSF52540 6 290 2.0E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_21695 884e77a45f24d8d5e29aa2c36b2d54eb 318 PIRSF PIRSF002849 1 318 9.7E-128 T 14-10-2018 DA442_17810 9231addba08b80dfaa8d3dc4768a46e5 416 SMART SM00487 27 232 2.7E-57 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DA442_17810 9231addba08b80dfaa8d3dc4768a46e5 416 Pfam PF00270 DEAD/DEAH box helicase 32 206 2.9E-49 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DA442_17810 9231addba08b80dfaa8d3dc4768a46e5 416 Pfam PF00271 Helicase conserved C-terminal domain 241 348 3.0E-29 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_17810 9231addba08b80dfaa8d3dc4768a46e5 416 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 164 172 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DA442_17810 9231addba08b80dfaa8d3dc4768a46e5 416 Gene3D G3DSA:3.40.50.300 2 221 1.3E-74 T 14-10-2018 DA442_17810 9231addba08b80dfaa8d3dc4768a46e5 416 SMART SM00490 267 348 1.1E-32 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_17810 9231addba08b80dfaa8d3dc4768a46e5 416 SUPERFAMILY SSF52540 86 370 1.38E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_17810 9231addba08b80dfaa8d3dc4768a46e5 416 Gene3D G3DSA:3.40.50.300 222 393 3.7E-47 T 14-10-2018 DA442_21675 e00f92edc67ecc4355ec29e2f51c8057 223 Gene3D G3DSA:3.40.50.2300 6 146 2.4E-33 T 14-10-2018 DA442_21675 e00f92edc67ecc4355ec29e2f51c8057 223 Gene3D G3DSA:1.10.10.10 151 215 1.9E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_21675 e00f92edc67ecc4355ec29e2f51c8057 223 SMART SM00421 154 211 2.3E-24 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_21675 e00f92edc67ecc4355ec29e2f51c8057 223 ProSitePatterns PS00622 LuxR-type HTH domain signature. 171 198 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_21675 e00f92edc67ecc4355ec29e2f51c8057 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 199 2.4E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_21675 e00f92edc67ecc4355ec29e2f51c8057 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 187 2.4E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_21675 e00f92edc67ecc4355ec29e2f51c8057 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 171 2.4E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_21675 e00f92edc67ecc4355ec29e2f51c8057 223 SUPERFAMILY SSF46894 145 213 1.22E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DA442_21675 e00f92edc67ecc4355ec29e2f51c8057 223 Pfam PF00196 Bacterial regulatory proteins, luxR family 156 211 1.4E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_25825 8c57018fad9425baba6b813337dce4ad 204 Gene3D G3DSA:3.90.850.10 7 202 1.3E-46 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DA442_25825 8c57018fad9425baba6b813337dce4ad 204 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 15 186 2.3E-28 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 DA442_25825 8c57018fad9425baba6b813337dce4ad 204 SUPERFAMILY SSF56529 12 187 1.57E-47 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DA442_01445 1dc3f83136094783a7b663c808a99eff 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 6.9E-25 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01445 1dc3f83136094783a7b663c808a99eff 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 6.9E-25 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01445 1dc3f83136094783a7b663c808a99eff 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 6.9E-25 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01445 1dc3f83136094783a7b663c808a99eff 92 Pfam PF00203 Ribosomal protein S19 3 83 1.9E-36 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01445 1dc3f83136094783a7b663c808a99eff 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 14-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01445 1dc3f83136094783a7b663c808a99eff 92 Gene3D G3DSA:3.30.860.10 1 92 6.4E-44 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01445 1dc3f83136094783a7b663c808a99eff 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.1E-46 T 14-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 DA442_01445 1dc3f83136094783a7b663c808a99eff 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.757 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01445 1dc3f83136094783a7b663c808a99eff 92 SUPERFAMILY SSF54570 3 84 1.01E-35 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01445 1dc3f83136094783a7b663c808a99eff 92 PIRSF PIRSF002144 1 92 1.1E-31 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_16555 9fe7fdfd2ae65317c4c5d82dad7b82b5 260 Pfam PF00293 NUDIX domain 137 236 1.1E-18 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DA442_16555 9fe7fdfd2ae65317c4c5d82dad7b82b5 260 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 101 129 6.1E-9 T 14-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 DA442_16555 9fe7fdfd2ae65317c4c5d82dad7b82b5 260 ProSitePatterns PS00893 Nudix box signature. 164 185 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DA442_16555 9fe7fdfd2ae65317c4c5d82dad7b82b5 260 Hamap MF_00297 NADH pyrophosphatase [nudC]. 3 260 41.688 T 14-10-2018 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 DA442_16555 9fe7fdfd2ae65317c4c5d82dad7b82b5 260 Gene3D G3DSA:3.90.79.20 3 130 1.5E-32 T 14-10-2018 DA442_16555 9fe7fdfd2ae65317c4c5d82dad7b82b5 260 SUPERFAMILY SSF55811 63 248 1.83E-43 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DA442_16555 9fe7fdfd2ae65317c4c5d82dad7b82b5 260 Gene3D G3DSA:3.90.79.10 131 259 2.8E-40 T 14-10-2018 DA442_13770 15d87b10c10888a6bceb4197c1a0cf63 149 Pfam PF00717 Peptidase S24-like 62 128 1.0E-13 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C DA442_13770 15d87b10c10888a6bceb4197c1a0cf63 149 SUPERFAMILY SSF51306 21 143 1.96E-34 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily DA442_13770 15d87b10c10888a6bceb4197c1a0cf63 149 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 59 69 3.9E-9 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 DA442_13770 15d87b10c10888a6bceb4197c1a0cf63 149 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 70 81 3.9E-9 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 DA442_13770 15d87b10c10888a6bceb4197c1a0cf63 149 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 98 110 3.9E-9 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 DA442_13770 15d87b10c10888a6bceb4197c1a0cf63 149 Gene3D G3DSA:2.10.109.10 32 147 4.6E-48 T 14-10-2018 DA442_16375 2575495aef871798a88862dcd2069eba 98 SUPERFAMILY SSF46689 8 98 1.84E-24 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_16375 2575495aef871798a88862dcd2069eba 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 31.402 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 DA442_16375 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 2.0E-31 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 DA442_16375 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 2.0E-31 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 DA442_16375 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 2.0E-31 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 DA442_16375 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 2.0E-31 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 DA442_16375 2575495aef871798a88862dcd2069eba 98 PIRSF PIRSF002097 1 98 2.6E-44 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 DA442_16375 2575495aef871798a88862dcd2069eba 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 4.0E-14 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DA442_16375 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 3.3E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DA442_16375 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 3.3E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DA442_16375 2575495aef871798a88862dcd2069eba 98 Gene3D G3DSA:1.10.10.60 1 98 2.7E-32 T 14-10-2018 DA442_23505 aecb7e66753ab1eb42534ebd4e0ddc38 288 SMART SM00849 38 223 1.7E-20 T 14-10-2018 IPR001279 Metallo-beta-lactamase DA442_23505 aecb7e66753ab1eb42534ebd4e0ddc38 288 SUPERFAMILY SSF56281 7 263 4.76E-40 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DA442_23505 aecb7e66753ab1eb42534ebd4e0ddc38 288 Pfam PF00753 Metallo-beta-lactamase superfamily 38 223 2.7E-13 T 14-10-2018 IPR001279 Metallo-beta-lactamase DA442_23505 aecb7e66753ab1eb42534ebd4e0ddc38 288 Gene3D G3DSA:3.60.15.10 23 259 1.3E-27 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DA442_07770 96e8f5cc24f3b694931d9b4fc56ec959 513 SUPERFAMILY SSF55073 362 511 7.85E-38 T 14-10-2018 IPR029787 Nucleotide cyclase DA442_07770 96e8f5cc24f3b694931d9b4fc56ec959 513 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 353 511 4.8E-34 T 14-10-2018 IPR000160 GGDEF domain DA442_07770 96e8f5cc24f3b694931d9b4fc56ec959 513 Gene3D G3DSA:3.30.70.270 351 512 6.5E-44 T 14-10-2018 DA442_07770 96e8f5cc24f3b694931d9b4fc56ec959 513 Gene3D G3DSA:3.30.450.350 84 301 7.1E-7 T 14-10-2018 DA442_07770 96e8f5cc24f3b694931d9b4fc56ec959 513 Pfam PF03924 CHASE domain 84 272 8.2E-26 T 14-10-2018 IPR006189 CHASE domain DA442_07770 96e8f5cc24f3b694931d9b4fc56ec959 513 SMART SM01079 78 274 1.3E-33 T 14-10-2018 IPR006189 CHASE domain DA442_07770 96e8f5cc24f3b694931d9b4fc56ec959 513 SMART SM00267 346 512 2.3E-36 T 14-10-2018 IPR000160 GGDEF domain DA442_07770 96e8f5cc24f3b694931d9b4fc56ec959 513 Pfam PF00990 Diguanylate cyclase, GGDEF domain 357 508 7.5E-34 T 14-10-2018 IPR000160 GGDEF domain DA442_05790 c8c7562a470418447f245e3aac732785 179 Pfam PF12915 Protein of unknown function (DUF3833) 17 177 1.6E-66 T 14-10-2018 IPR024409 Protein of unknown function DUF3833 DA442_10600 23fbaf9721ec09e9a013ae8dcab0051f 514 SMART SM00382 225 368 1.0E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_10600 23fbaf9721ec09e9a013ae8dcab0051f 514 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 417 426 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site DA442_10600 23fbaf9721ec09e9a013ae8dcab0051f 514 SUPERFAMILY SSF55785 81 171 7.8E-10 T 14-10-2018 IPR035965 PAS domain superfamily DA442_10600 23fbaf9721ec09e9a013ae8dcab0051f 514 Gene3D G3DSA:1.10.10.60 459 513 3.0E-25 T 14-10-2018 DA442_10600 23fbaf9721ec09e9a013ae8dcab0051f 514 Pfam PF00989 PAS fold 83 130 4.5E-6 T 14-10-2018 IPR013767 PAS fold GO:0006355 DA442_10600 23fbaf9721ec09e9a013ae8dcab0051f 514 Pfam PF00158 Sigma-54 interaction domain 206 370 4.5E-57 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DA442_10600 23fbaf9721ec09e9a013ae8dcab0051f 514 SUPERFAMILY SSF55021 1 68 1.02E-6 T 14-10-2018 DA442_10600 23fbaf9721ec09e9a013ae8dcab0051f 514 Gene3D G3DSA:3.40.50.300 198 375 1.1E-56 T 14-10-2018 DA442_10600 23fbaf9721ec09e9a013ae8dcab0051f 514 Gene3D G3DSA:1.10.8.60 377 451 1.8E-15 T 14-10-2018 DA442_10600 23fbaf9721ec09e9a013ae8dcab0051f 514 SUPERFAMILY SSF46689 461 512 1.02E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_10600 23fbaf9721ec09e9a013ae8dcab0051f 514 SUPERFAMILY SSF52540 205 445 6.69E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_10600 23fbaf9721ec09e9a013ae8dcab0051f 514 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 229 242 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DA442_10600 23fbaf9721ec09e9a013ae8dcab0051f 514 Gene3D G3DSA:3.30.70.260 1 80 1.3E-25 T 14-10-2018 DA442_10600 23fbaf9721ec09e9a013ae8dcab0051f 514 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 465 513 3.0E-28 T 14-10-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 DA442_10600 23fbaf9721ec09e9a013ae8dcab0051f 514 SMART SM00091 80 146 7.8E-7 T 14-10-2018 IPR000014 PAS domain DA442_10600 23fbaf9721ec09e9a013ae8dcab0051f 514 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 290 305 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DA442_10600 23fbaf9721ec09e9a013ae8dcab0051f 514 Gene3D G3DSA:3.30.450.20 82 187 7.5E-19 T 14-10-2018 DA442_16345 800c2b25c5cc882db08ed97f660cfd23 149 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 145 2.0E-64 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DA442_16345 800c2b25c5cc882db08ed97f660cfd23 149 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 21 149 1.0E-70 T 14-10-2018 DA442_16345 800c2b25c5cc882db08ed97f660cfd23 149 PIRSF PIRSF001399 3 149 7.6E-60 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DA442_16345 800c2b25c5cc882db08ed97f660cfd23 149 Pfam PF01220 Dehydroquinase class II 6 142 3.6E-62 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DA442_16345 800c2b25c5cc882db08ed97f660cfd23 149 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 14-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DA442_16345 800c2b25c5cc882db08ed97f660cfd23 149 SUPERFAMILY SSF52304 4 146 2.88E-62 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DA442_16345 800c2b25c5cc882db08ed97f660cfd23 149 Gene3D G3DSA:3.40.50.9100 1 149 4.3E-67 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DA442_16345 800c2b25c5cc882db08ed97f660cfd23 149 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 149 75.015 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DA442_20720 e23406c894f01d94eef31956d91cd221 411 SMART SM00852 184 321 1.6E-41 T 14-10-2018 IPR001453 MoaB/Mog domain DA442_20720 e23406c894f01d94eef31956d91cd221 411 Gene3D G3DSA:3.40.980.10 179 331 1.1E-145 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily DA442_20720 e23406c894f01d94eef31956d91cd221 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 11 171 1.5E-47 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DA442_20720 e23406c894f01d94eef31956d91cd221 411 Gene3D G3DSA:2.40.340.10 332 401 1.1E-145 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DA442_20720 e23406c894f01d94eef31956d91cd221 411 Gene3D G3DSA:2.170.190.11 53 145 1.1E-145 T 14-10-2018 DA442_20720 e23406c894f01d94eef31956d91cd221 411 Gene3D G3DSA:3.90.105.10 31 178 1.1E-145 T 14-10-2018 DA442_20720 e23406c894f01d94eef31956d91cd221 411 Pfam PF03454 MoeA C-terminal region (domain IV) 336 406 6.5E-22 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DA442_20720 e23406c894f01d94eef31956d91cd221 411 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 257 290 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 DA442_20720 e23406c894f01d94eef31956d91cd221 411 Pfam PF00994 Probable molybdopterin binding domain 186 320 4.6E-25 T 14-10-2018 IPR001453 MoaB/Mog domain DA442_20720 e23406c894f01d94eef31956d91cd221 411 SUPERFAMILY SSF63882 7 180 9.81E-57 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DA442_20720 e23406c894f01d94eef31956d91cd221 411 SUPERFAMILY SSF53218 181 327 1.7E-41 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily DA442_20720 e23406c894f01d94eef31956d91cd221 411 SUPERFAMILY SSF63867 332 410 2.49E-23 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DA442_20720 e23406c894f01d94eef31956d91cd221 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 180 317 3.3E-32 T 14-10-2018 IPR001453 MoaB/Mog domain DA442_08640 6ead84a00b245ed834e700bb46ffe3c7 323 Gene3D G3DSA:3.40.190.150 31 314 1.6E-58 T 14-10-2018 DA442_08640 6ead84a00b245ed834e700bb46ffe3c7 323 Gene3D G3DSA:3.40.190.10 123 249 1.6E-58 T 14-10-2018 DA442_08640 6ead84a00b245ed834e700bb46ffe3c7 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 65 320 1.5E-26 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 DA442_08640 6ead84a00b245ed834e700bb46ffe3c7 323 PIRSF PIRSF017082 2 323 2.3E-83 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 DA442_08640 6ead84a00b245ed834e700bb46ffe3c7 323 SUPERFAMILY SSF53850 105 289 3.04E-8 T 14-10-2018 DA442_12680 317d76137e900f81f0a93763b2d47c3c 154 Hamap MF_00042 Ribonuclease H [rnhA]. 2 149 36.438 T 14-10-2018 IPR022892 Ribonuclease HI GO:0004523 DA442_12680 317d76137e900f81f0a93763b2d47c3c 154 Gene3D G3DSA:3.30.420.10 1 154 4.4E-60 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DA442_12680 317d76137e900f81f0a93763b2d47c3c 154 SUPERFAMILY SSF53098 3 143 3.54E-58 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DA442_12680 317d76137e900f81f0a93763b2d47c3c 154 Pfam PF00075 RNase H 3 141 6.8E-53 T 14-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 DA442_24405 593667284276d4c1df7adbe231ba26aa 336 PIRSF PIRSF002825 2 329 2.8E-79 T 14-10-2018 IPR026045 Ferric binding protein DA442_24405 593667284276d4c1df7adbe231ba26aa 336 Gene3D G3DSA:3.40.190.10 30 297 7.3E-79 T 14-10-2018 DA442_24405 593667284276d4c1df7adbe231ba26aa 336 Pfam PF13343 Bacterial extracellular solute-binding protein 75 293 1.4E-26 T 14-10-2018 DA442_24405 593667284276d4c1df7adbe231ba26aa 336 TIGRFAM TIGR03261 phnS2: putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein 6 333 1.9E-159 T 14-10-2018 IPR017663 ABC transport system, 1-aminoethylphosphonate-binding protein, putative DA442_24405 593667284276d4c1df7adbe231ba26aa 336 SUPERFAMILY SSF53850 27 326 2.74E-63 T 14-10-2018 DA442_24405 593667284276d4c1df7adbe231ba26aa 336 Gene3D G3DSA:3.40.190.10 133 311 7.3E-79 T 14-10-2018 DA442_15190 84983df4ce4f4fd6453418d40e78851a 451 SUPERFAMILY SSF54631 138 278 7.58E-27 T 14-10-2018 DA442_15190 84983df4ce4f4fd6453418d40e78851a 451 Pfam PF01769 Divalent cation transporter 323 444 5.4E-23 T 14-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 DA442_15190 84983df4ce4f4fd6453418d40e78851a 451 SUPERFAMILY SSF158791 12 136 1.31E-30 T 14-10-2018 DA442_15190 84983df4ce4f4fd6453418d40e78851a 451 Pfam PF00571 CBS domain 140 195 6.8E-4 T 14-10-2018 IPR000644 CBS domain DA442_15190 84983df4ce4f4fd6453418d40e78851a 451 Pfam PF00571 CBS domain 214 257 8.5E-5 T 14-10-2018 IPR000644 CBS domain DA442_15190 84983df4ce4f4fd6453418d40e78851a 451 SUPERFAMILY SSF161093 280 450 5.49E-44 T 14-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 DA442_15190 84983df4ce4f4fd6453418d40e78851a 451 Gene3D G3DSA:1.25.60.10 8 134 1.6E-20 T 14-10-2018 IPR038076 MgtE, N-terminal domain superfamily DA442_15190 84983df4ce4f4fd6453418d40e78851a 451 TIGRFAM TIGR00400 mgtE: magnesium transporter 20 451 3.9E-87 T 14-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 DA442_15190 84983df4ce4f4fd6453418d40e78851a 451 Gene3D G3DSA:3.10.580.10 135 262 1.9E-37 T 14-10-2018 DA442_15190 84983df4ce4f4fd6453418d40e78851a 451 SMART SM00116 212 258 0.0014 T 14-10-2018 IPR000644 CBS domain DA442_15190 84983df4ce4f4fd6453418d40e78851a 451 SMART SM00924 36 139 3.0E-37 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain DA442_15190 84983df4ce4f4fd6453418d40e78851a 451 Gene3D G3DSA:1.10.357.20 277 451 2.9E-45 T 14-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain DA442_15190 84983df4ce4f4fd6453418d40e78851a 451 Pfam PF03448 MgtE intracellular N domain 36 137 9.0E-27 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain DA442_03055 12fe0e25b22cb37c8b493023b4369d19 377 Gene3D G3DSA:3.20.20.105 1 370 2.1E-174 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DA442_03055 12fe0e25b22cb37c8b493023b4369d19 377 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 5 370 1.1E-186 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DA442_03055 12fe0e25b22cb37c8b493023b4369d19 377 SUPERFAMILY SSF51713 3 366 3.66E-164 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DA442_03055 12fe0e25b22cb37c8b493023b4369d19 377 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 3 366 57.27 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DA442_03055 12fe0e25b22cb37c8b493023b4369d19 377 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 5 370 4.2E-178 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DA442_03055 12fe0e25b22cb37c8b493023b4369d19 377 Pfam PF01702 Queuine tRNA-ribosyltransferase 128 363 3.2E-97 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DA442_02950 2b4a7ed319b95708bc48bfbb61a89ed1 229 Pfam PF00072 Response regulator receiver domain 5 116 1.2E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_02950 2b4a7ed319b95708bc48bfbb61a89ed1 229 SMART SM00448 3 116 1.9E-45 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_02950 2b4a7ed319b95708bc48bfbb61a89ed1 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 3.9E-28 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DA442_02950 2b4a7ed319b95708bc48bfbb61a89ed1 229 SMART SM00862 150 225 1.3E-27 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DA442_02950 2b4a7ed319b95708bc48bfbb61a89ed1 229 Gene3D G3DSA:3.40.50.2300 1 126 9.5E-39 T 14-10-2018 DA442_02950 2b4a7ed319b95708bc48bfbb61a89ed1 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 4.9E-113 T 14-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 DA442_02950 2b4a7ed319b95708bc48bfbb61a89ed1 229 Gene3D G3DSA:1.10.10.10 127 228 3.1E-40 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_02950 2b4a7ed319b95708bc48bfbb61a89ed1 229 SUPERFAMILY SSF52172 3 183 4.83E-43 T 14-10-2018 IPR011006 CheY-like superfamily DA442_12720 15f5a4b50175434366a5430c5bf5982a 438 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 21 203 6.7E-54 T 14-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 DA442_12720 15f5a4b50175434366a5430c5bf5982a 438 SMART SM00977 365 434 1.9E-21 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 DA442_12720 15f5a4b50175434366a5430c5bf5982a 438 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 8 309 23.285 T 14-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 DA442_12720 15f5a4b50175434366a5430c5bf5982a 438 SUPERFAMILY SSF52402 15 233 1.1E-61 T 14-10-2018 DA442_12720 15f5a4b50175434366a5430c5bf5982a 438 SUPERFAMILY SSF82829 236 319 2.75E-24 T 14-10-2018 DA442_12720 15f5a4b50175434366a5430c5bf5982a 438 SUPERFAMILY SSF56037 322 436 2.17E-28 T 14-10-2018 DA442_12720 15f5a4b50175434366a5430c5bf5982a 438 Gene3D G3DSA:1.20.59.20 235 318 1.2E-26 T 14-10-2018 DA442_12720 15f5a4b50175434366a5430c5bf5982a 438 Pfam PF09179 TilS substrate binding domain 248 315 1.0E-18 T 14-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 DA442_12720 15f5a4b50175434366a5430c5bf5982a 438 Gene3D G3DSA:3.40.50.620 12 233 8.5E-72 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DA442_12720 15f5a4b50175434366a5430c5bf5982a 438 Pfam PF01171 PP-loop family 21 199 1.3E-57 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 DA442_12720 15f5a4b50175434366a5430c5bf5982a 438 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 366 411 1.5E-14 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 DA442_12720 15f5a4b50175434366a5430c5bf5982a 438 Pfam PF11734 TilS substrate C-terminal domain 365 435 1.8E-24 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 DA442_12760 85e58b992783507e4fa07b9a236dcab2 804 Gene3D G3DSA:3.10.20.310 92 174 2.6E-17 T 14-10-2018 DA442_12760 85e58b992783507e4fa07b9a236dcab2 804 Gene3D G3DSA:3.10.20.310 18 91 1.2E-19 T 14-10-2018 DA442_12760 85e58b992783507e4fa07b9a236dcab2 804 Pfam PF01103 Surface antigen 448 804 1.3E-90 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 DA442_12760 85e58b992783507e4fa07b9a236dcab2 804 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 804 6.4E-278 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 DA442_12760 85e58b992783507e4fa07b9a236dcab2 804 Gene3D G3DSA:3.10.20.310 347 424 6.7E-26 T 14-10-2018 DA442_12760 85e58b992783507e4fa07b9a236dcab2 804 PIRSF PIRSF006076 1 804 4.8E-245 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 DA442_12760 85e58b992783507e4fa07b9a236dcab2 804 Gene3D G3DSA:3.10.20.310 264 346 2.9E-14 T 14-10-2018 DA442_12760 85e58b992783507e4fa07b9a236dcab2 804 Pfam PF07244 Surface antigen variable number repeat 92 172 8.2E-12 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 DA442_12760 85e58b992783507e4fa07b9a236dcab2 804 Pfam PF07244 Surface antigen variable number repeat 266 344 8.8E-10 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 DA442_12760 85e58b992783507e4fa07b9a236dcab2 804 Pfam PF07244 Surface antigen variable number repeat 347 420 5.6E-17 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 DA442_12760 85e58b992783507e4fa07b9a236dcab2 804 Pfam PF07244 Surface antigen variable number repeat 176 263 4.5E-15 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 DA442_12760 85e58b992783507e4fa07b9a236dcab2 804 Gene3D G3DSA:2.40.160.50 425 804 3.7E-121 T 14-10-2018 DA442_12760 85e58b992783507e4fa07b9a236dcab2 804 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 804 25.849 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 DA442_12760 85e58b992783507e4fa07b9a236dcab2 804 Gene3D G3DSA:3.10.20.310 175 263 3.9E-22 T 14-10-2018 DA442_08000 18899690698e1784df28fb5b20efae54 139 PRINTS PR00502 NUDIX hydrolase family signature 31 45 3.0E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DA442_08000 18899690698e1784df28fb5b20efae54 139 PRINTS PR00502 NUDIX hydrolase family signature 45 60 3.0E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DA442_08000 18899690698e1784df28fb5b20efae54 139 Gene3D G3DSA:3.90.79.10 3 138 4.3E-21 T 14-10-2018 DA442_08000 18899690698e1784df28fb5b20efae54 139 Pfam PF00293 NUDIX domain 6 127 1.9E-16 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DA442_08000 18899690698e1784df28fb5b20efae54 139 SUPERFAMILY SSF55811 7 127 3.38E-22 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DA442_12450 765f204838c257ecffd979823c886ad3 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 67 83 1.0E-12 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 DA442_12450 765f204838c257ecffd979823c886ad3 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 88 101 1.0E-12 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 DA442_12450 765f204838c257ecffd979823c886ad3 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 32 48 1.0E-12 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 DA442_12450 765f204838c257ecffd979823c886ad3 103 Pfam PF02049 Flagellar hook-basal body complex protein FliE 18 103 6.0E-29 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 DA442_12450 765f204838c257ecffd979823c886ad3 103 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 18 102 1.1E-18 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 DA442_12450 765f204838c257ecffd979823c886ad3 103 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 1 103 16.721 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 DA442_10680 0409801b4b1a37410b0f585f25fc2948 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 3.5E-12 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 DA442_10680 0409801b4b1a37410b0f585f25fc2948 466 SUPERFAMILY SSF50249 15 101 8.78E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_10680 0409801b4b1a37410b0f585f25fc2948 466 Gene3D G3DSA:3.30.930.10 109 465 3.0E-109 T 14-10-2018 DA442_10680 0409801b4b1a37410b0f585f25fc2948 466 SUPERFAMILY SSF55681 97 464 3.98E-95 T 14-10-2018 DA442_10680 0409801b4b1a37410b0f585f25fc2948 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 45.922 T 14-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 DA442_10680 0409801b4b1a37410b0f585f25fc2948 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 3.6E-81 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DA442_10680 0409801b4b1a37410b0f585f25fc2948 466 Gene3D G3DSA:2.40.50.140 3 106 1.0E-19 T 14-10-2018 DA442_10680 0409801b4b1a37410b0f585f25fc2948 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 1.6E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DA442_10680 0409801b4b1a37410b0f585f25fc2948 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 1.6E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DA442_10680 0409801b4b1a37410b0f585f25fc2948 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 1.6E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DA442_10680 0409801b4b1a37410b0f585f25fc2948 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 1.6E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DA442_10680 0409801b4b1a37410b0f585f25fc2948 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 3.5E-207 T 14-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 DA442_15670 671bcc07ede96597ef2f60a6920437db 263 TIGRFAM TIGR00761 argB: acetylglutamate kinase 9 234 1.1E-62 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DA442_15670 671bcc07ede96597ef2f60a6920437db 263 Hamap MF_00082 Acetylglutamate kinase [argB]. 6 255 42.366 T 14-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DA442_15670 671bcc07ede96597ef2f60a6920437db 263 Gene3D G3DSA:3.40.1160.10 4 260 5.7E-64 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DA442_15670 671bcc07ede96597ef2f60a6920437db 263 SUPERFAMILY SSF53633 9 261 6.41E-58 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DA442_15670 671bcc07ede96597ef2f60a6920437db 263 Pfam PF00696 Amino acid kinase family 9 238 1.1E-35 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DA442_15670 671bcc07ede96597ef2f60a6920437db 263 PIRSF PIRSF000728 1 263 1.9E-69 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DA442_25000 4f80ee86363d1513fcecd8fabb4a9d29 242 Pfam PF07702 UTRA domain 97 234 2.3E-32 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DA442_25000 4f80ee86363d1513fcecd8fabb4a9d29 242 Gene3D G3DSA:1.10.10.10 13 80 2.2E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_25000 4f80ee86363d1513fcecd8fabb4a9d29 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 75 6.3E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_25000 4f80ee86363d1513fcecd8fabb4a9d29 242 SMART SM00345 16 75 3.3E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_25000 4f80ee86363d1513fcecd8fabb4a9d29 242 SUPERFAMILY SSF46785 16 79 9.3E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_25000 4f80ee86363d1513fcecd8fabb4a9d29 242 SUPERFAMILY SSF64288 63 238 1.1E-37 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DA442_25000 4f80ee86363d1513fcecd8fabb4a9d29 242 Gene3D G3DSA:3.40.1410.10 85 240 9.9E-31 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DA442_25000 4f80ee86363d1513fcecd8fabb4a9d29 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 2.5E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_25000 4f80ee86363d1513fcecd8fabb4a9d29 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 2.5E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_25000 4f80ee86363d1513fcecd8fabb4a9d29 242 SMART SM00866 96 235 2.7E-21 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DA442_07085 fb76f98382708ce5a2df119cb453fcf3 272 Gene3D G3DSA:1.10.101.10 201 267 5.1E-20 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 DA442_07085 fb76f98382708ce5a2df119cb453fcf3 272 Gene3D G3DSA:3.30.20.10 73 135 4.2E-14 T 14-10-2018 DA442_07085 fb76f98382708ce5a2df119cb453fcf3 272 SUPERFAMILY SSF47090 205 263 4.91E-15 T 14-10-2018 IPR036365 PGBD-like superfamily DA442_07085 fb76f98382708ce5a2df119cb453fcf3 272 Pfam PF01471 Putative peptidoglycan binding domain 226 262 4.7E-11 T 14-10-2018 IPR002477 Peptidoglycan binding-like DA442_07085 fb76f98382708ce5a2df119cb453fcf3 272 SUPERFAMILY SSF53955 50 187 1.8E-21 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily DA442_07085 fb76f98382708ce5a2df119cb453fcf3 272 Pfam PF00182 Chitinase class I 89 135 4.8E-6 T 14-10-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 DA442_00010 81864a2af446d479dd2b4431ecb5c085 366 SUPERFAMILY SSF55979 126 244 1.74E-28 T 14-10-2018 DA442_00010 81864a2af446d479dd2b4431ecb5c085 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 1.4E-38 T 14-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 DA442_00010 81864a2af446d479dd2b4431ecb5c085 366 SMART SM00480 17 362 5.5E-151 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 DA442_00010 81864a2af446d479dd2b4431ecb5c085 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 243 1.1E-35 T 14-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 DA442_00010 81864a2af446d479dd2b4431ecb5c085 366 PIRSF PIRSF000804 1 366 3.9E-118 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 DA442_00010 81864a2af446d479dd2b4431ecb5c085 366 Gene3D G3DSA:3.10.150.10 124 247 4.5E-36 T 14-10-2018 DA442_00010 81864a2af446d479dd2b4431ecb5c085 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 2.0E-38 T 14-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 DA442_00010 81864a2af446d479dd2b4431ecb5c085 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 6.4E-109 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 DA442_00010 81864a2af446d479dd2b4431ecb5c085 366 Gene3D G3DSA:3.10.150.10 1 122 2.6E-42 T 14-10-2018 DA442_00010 81864a2af446d479dd2b4431ecb5c085 366 SUPERFAMILY SSF55979 245 366 2.06E-36 T 14-10-2018 DA442_00010 81864a2af446d479dd2b4431ecb5c085 366 Gene3D G3DSA:3.10.150.10 248 366 3.4E-39 T 14-10-2018 DA442_00010 81864a2af446d479dd2b4431ecb5c085 366 SUPERFAMILY SSF55979 1 118 2.54E-30 T 14-10-2018 DA442_19530 f3267dcc411c8cd6c0218860c4190158 227 Pfam PF05618 Putative ATP-dependant zinc protease 87 221 9.8E-43 T 14-10-2018 DA442_19530 f3267dcc411c8cd6c0218860c4190158 227 SUPERFAMILY SSF50630 87 218 6.65E-42 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily DA442_19530 f3267dcc411c8cd6c0218860c4190158 227 Gene3D G3DSA:2.40.70.10 85 211 1.6E-39 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily DA442_10750 f5b5d8e52536bc74c8c7acfc371c5d53 212 SUPERFAMILY SSF46894 140 211 1.8E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DA442_10750 f5b5d8e52536bc74c8c7acfc371c5d53 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_10750 f5b5d8e52536bc74c8c7acfc371c5d53 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 3.3E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_10750 f5b5d8e52536bc74c8c7acfc371c5d53 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 3.3E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_10750 f5b5d8e52536bc74c8c7acfc371c5d53 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 3.3E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_10750 f5b5d8e52536bc74c8c7acfc371c5d53 212 SUPERFAMILY SSF52172 4 135 8.54E-35 T 14-10-2018 IPR011006 CheY-like superfamily DA442_10750 f5b5d8e52536bc74c8c7acfc371c5d53 212 SMART SM00448 5 118 1.7E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_10750 f5b5d8e52536bc74c8c7acfc371c5d53 212 Pfam PF00072 Response regulator receiver domain 7 119 4.5E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_10750 f5b5d8e52536bc74c8c7acfc371c5d53 212 SMART SM00421 148 205 1.9E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_10750 f5b5d8e52536bc74c8c7acfc371c5d53 212 Gene3D G3DSA:3.40.50.12740 5 211 2.8E-66 T 14-10-2018 DA442_10750 f5b5d8e52536bc74c8c7acfc371c5d53 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 205 1.7E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_25370 de6366e3330535e1d30d0e04328cf1bf 171 TIGRFAM TIGR04108 HutX: putative heme utilization carrier protein HutX 12 165 2.6E-63 T 14-10-2018 IPR010413 Heme utilization carrier protein HutX-like DA442_25370 de6366e3330535e1d30d0e04328cf1bf 171 Gene3D G3DSA:3.40.1570.10 1 171 4.9E-61 T 14-10-2018 DA442_25370 de6366e3330535e1d30d0e04328cf1bf 171 PIRSF PIRSF030840 1 171 2.9E-64 T 14-10-2018 IPR010413 Heme utilization carrier protein HutX-like DA442_25370 de6366e3330535e1d30d0e04328cf1bf 171 SUPERFAMILY SSF144064 2 167 1.57E-56 T 14-10-2018 DA442_25370 de6366e3330535e1d30d0e04328cf1bf 171 Pfam PF06228 Haem utilisation ChuX/HutX 28 165 1.4E-32 T 14-10-2018 IPR010413 Heme utilization carrier protein HutX-like DA442_23700 af1acc065bc9c68f29480c02da35ef32 170 Gene3D G3DSA:3.40.220.10 1 170 5.9E-61 T 14-10-2018 DA442_23700 af1acc065bc9c68f29480c02da35ef32 170 SMART SM00506 3 136 5.7E-49 T 14-10-2018 IPR002589 Macro domain DA442_23700 af1acc065bc9c68f29480c02da35ef32 170 SUPERFAMILY SSF52949 4 168 2.02E-52 T 14-10-2018 DA442_23700 af1acc065bc9c68f29480c02da35ef32 170 Pfam PF01661 Macro domain 20 136 7.8E-38 T 14-10-2018 IPR002589 Macro domain DA442_11845 49a07737907fb1a498e251002bcababa 194 SUPERFAMILY SSF54719 84 193 1.31E-43 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DA442_11845 49a07737907fb1a498e251002bcababa 194 Gene3D G3DSA:1.10.287.990 20 82 8.8E-25 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DA442_11845 49a07737907fb1a498e251002bcababa 194 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 4.7E-34 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DA442_11845 49a07737907fb1a498e251002bcababa 194 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DA442_11845 49a07737907fb1a498e251002bcababa 194 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 1.0E-38 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DA442_11845 49a07737907fb1a498e251002bcababa 194 Gene3D G3DSA:2.40.500.20 83 194 1.3E-42 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DA442_11845 49a07737907fb1a498e251002bcababa 194 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.5E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DA442_11845 49a07737907fb1a498e251002bcababa 194 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 1.5E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DA442_11845 49a07737907fb1a498e251002bcababa 194 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.5E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DA442_11845 49a07737907fb1a498e251002bcababa 194 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 1.5E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DA442_11845 49a07737907fb1a498e251002bcababa 194 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 1.5E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DA442_11845 49a07737907fb1a498e251002bcababa 194 SUPERFAMILY SSF46609 1 84 5.24E-35 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DA442_11845 49a07737907fb1a498e251002bcababa 194 PIRSF PIRSF000349 1 194 2.0E-84 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DA442_20830 4b75a3731e90985021cd08b067a942fd 1050 Gene3D G3DSA:3.30.70.1430 39 820 0.0 T 14-10-2018 DA442_20830 4b75a3731e90985021cd08b067a942fd 1050 Gene3D G3DSA:1.20.1640.10 9 512 0.0 T 14-10-2018 DA442_20830 4b75a3731e90985021cd08b067a942fd 1050 Gene3D G3DSA:3.30.2090.10 180 277 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DA442_20830 4b75a3731e90985021cd08b067a942fd 1050 Gene3D G3DSA:1.20.1640.10 513 1027 0.0 T 14-10-2018 DA442_20830 4b75a3731e90985021cd08b067a942fd 1050 SUPERFAMILY SSF82866 299 500 3.14E-48 T 14-10-2018 DA442_20830 4b75a3731e90985021cd08b067a942fd 1050 SUPERFAMILY SSF82714 184 273 1.05E-22 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DA442_20830 4b75a3731e90985021cd08b067a942fd 1050 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1033 0.0 T 14-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 DA442_20830 4b75a3731e90985021cd08b067a942fd 1050 SUPERFAMILY SSF82866 808 1035 1.96E-43 T 14-10-2018 DA442_20830 4b75a3731e90985021cd08b067a942fd 1050 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 4.4E-89 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_20830 4b75a3731e90985021cd08b067a942fd 1050 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 4.4E-89 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_20830 4b75a3731e90985021cd08b067a942fd 1050 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 4.4E-89 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_20830 4b75a3731e90985021cd08b067a942fd 1050 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 4.4E-89 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_20830 4b75a3731e90985021cd08b067a942fd 1050 PRINTS PR00702 Acriflavin resistance protein family signature 473 496 4.4E-89 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_20830 4b75a3731e90985021cd08b067a942fd 1050 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 4.4E-89 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_20830 4b75a3731e90985021cd08b067a942fd 1050 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 4.4E-89 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_20830 4b75a3731e90985021cd08b067a942fd 1050 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 4.4E-89 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_20830 4b75a3731e90985021cd08b067a942fd 1050 PRINTS PR00702 Acriflavin resistance protein family signature 448 471 4.4E-89 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_20830 4b75a3731e90985021cd08b067a942fd 1050 Pfam PF00873 AcrB/AcrD/AcrF family 3 1030 0.0 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_20830 4b75a3731e90985021cd08b067a942fd 1050 Gene3D G3DSA:3.30.70.1430 567 671 0.0 T 14-10-2018 DA442_20830 4b75a3731e90985021cd08b067a942fd 1050 SUPERFAMILY SSF82714 725 810 1.19E-19 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DA442_20830 4b75a3731e90985021cd08b067a942fd 1050 Gene3D G3DSA:3.30.70.1440 672 869 0.0 T 14-10-2018 DA442_20830 4b75a3731e90985021cd08b067a942fd 1050 SUPERFAMILY SSF82693 136 332 4.19E-22 T 14-10-2018 DA442_20830 4b75a3731e90985021cd08b067a942fd 1050 Gene3D G3DSA:3.30.70.1320 134 334 0.0 T 14-10-2018 DA442_20830 4b75a3731e90985021cd08b067a942fd 1050 SUPERFAMILY SSF82693 565 674 7.85E-22 T 14-10-2018 DA442_20830 4b75a3731e90985021cd08b067a942fd 1050 Gene3D G3DSA:3.30.2090.10 724 812 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DA442_20830 4b75a3731e90985021cd08b067a942fd 1050 SUPERFAMILY SSF82693 39 132 5.75E-26 T 14-10-2018 DA442_25585 9d1e423fe2e35a1356d67fe368f078c3 571 Pfam PF11604 Copper binding periplasmic protein CusF 422 487 1.3E-22 T 14-10-2018 IPR021647 Copper binding periplasmic protein CusF DA442_25585 9d1e423fe2e35a1356d67fe368f078c3 571 Pfam PF11604 Copper binding periplasmic protein CusF 502 567 1.7E-19 T 14-10-2018 IPR021647 Copper binding periplasmic protein CusF DA442_25585 9d1e423fe2e35a1356d67fe368f078c3 571 Gene3D G3DSA:2.40.50.100 132 174 9.1E-7 T 14-10-2018 DA442_25585 9d1e423fe2e35a1356d67fe368f078c3 571 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 113 321 8.2E-78 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DA442_25585 9d1e423fe2e35a1356d67fe368f078c3 571 SUPERFAMILY SSF111369 135 326 1.31E-15 T 14-10-2018 DA442_25585 9d1e423fe2e35a1356d67fe368f078c3 571 Gene3D G3DSA:2.40.50.320 419 488 4.7E-19 T 14-10-2018 DA442_25585 9d1e423fe2e35a1356d67fe368f078c3 571 Gene3D G3DSA:2.40.50.320 498 569 7.6E-17 T 14-10-2018 DA442_25585 9d1e423fe2e35a1356d67fe368f078c3 571 Gene3D G3DSA:2.40.30.170 231 327 2.4E-23 T 14-10-2018 DA442_25585 9d1e423fe2e35a1356d67fe368f078c3 571 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 214 394 2.6E-34 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DA442_25585 9d1e423fe2e35a1356d67fe368f078c3 571 Gene3D G3DSA:2.40.420.20 328 418 5.5E-22 T 14-10-2018 DA442_21530 dcf48ace36bd24465820e77ecb3c7c30 479 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 333 341 - T 14-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DA442_21530 dcf48ace36bd24465820e77ecb3c7c30 479 Pfam PF00199 Catalase 7 387 4.0E-190 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DA442_21530 dcf48ace36bd24465820e77ecb3c7c30 479 PRINTS PR00067 Catalase signature 83 101 1.1E-72 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DA442_21530 dcf48ace36bd24465820e77ecb3c7c30 479 PRINTS PR00067 Catalase signature 320 346 1.1E-72 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DA442_21530 dcf48ace36bd24465820e77ecb3c7c30 479 PRINTS PR00067 Catalase signature 104 121 1.1E-72 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DA442_21530 dcf48ace36bd24465820e77ecb3c7c30 479 PRINTS PR00067 Catalase signature 123 141 1.1E-72 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DA442_21530 dcf48ace36bd24465820e77ecb3c7c30 479 PRINTS PR00067 Catalase signature 20 43 1.1E-72 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DA442_21530 dcf48ace36bd24465820e77ecb3c7c30 479 PRINTS PR00067 Catalase signature 288 315 1.1E-72 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DA442_21530 dcf48ace36bd24465820e77ecb3c7c30 479 Pfam PF06628 Catalase-related immune-responsive 416 474 4.5E-21 T 14-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DA442_21530 dcf48ace36bd24465820e77ecb3c7c30 479 SMART SM01060 7 391 2.0E-287 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DA442_21530 dcf48ace36bd24465820e77ecb3c7c30 479 PIRSF PIRSF038928 1 479 4.2E-223 T 14-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DA442_21530 dcf48ace36bd24465820e77ecb3c7c30 479 ProSitePatterns PS00438 Catalase proximal active site signature. 43 59 - T 14-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DA442_21530 dcf48ace36bd24465820e77ecb3c7c30 479 SUPERFAMILY SSF56634 3 477 1.22E-214 T 14-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DA442_21530 dcf48ace36bd24465820e77ecb3c7c30 479 Gene3D G3DSA:2.40.180.10 2 479 2.8E-230 T 14-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 DA442_16610 70cad764e43df79e6e3885ce8ebdcf85 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.8E-14 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DA442_16610 70cad764e43df79e6e3885ce8ebdcf85 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 2.1E-231 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DA442_16610 70cad764e43df79e6e3885ce8ebdcf85 394 SUPERFAMILY SSF50447 205 301 3.73E-29 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DA442_16610 70cad764e43df79e6e3885ce8ebdcf85 394 Gene3D G3DSA:2.40.30.10 206 334 1.8E-52 T 14-10-2018 DA442_16610 70cad764e43df79e6e3885ce8ebdcf85 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site DA442_16610 70cad764e43df79e6e3885ce8ebdcf85 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 2.8E-33 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal DA442_16610 70cad764e43df79e6e3885ce8ebdcf85 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.796 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DA442_16610 70cad764e43df79e6e3885ce8ebdcf85 394 SUPERFAMILY SSF50465 298 393 1.61E-35 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DA442_16610 70cad764e43df79e6e3885ce8ebdcf85 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 2.1E-58 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_16610 70cad764e43df79e6e3885ce8ebdcf85 394 Gene3D G3DSA:2.40.30.10 338 393 7.4E-29 T 14-10-2018 DA442_16610 70cad764e43df79e6e3885ce8ebdcf85 394 Gene3D G3DSA:3.40.50.300 1 203 4.0E-70 T 14-10-2018 DA442_16610 70cad764e43df79e6e3885ce8ebdcf85 394 SUPERFAMILY SSF52540 6 219 5.86E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_16610 70cad764e43df79e6e3885ce8ebdcf85 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 1.0E-15 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DA442_16610 70cad764e43df79e6e3885ce8ebdcf85 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.7E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_16610 70cad764e43df79e6e3885ce8ebdcf85 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.7E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_16610 70cad764e43df79e6e3885ce8ebdcf85 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_16610 70cad764e43df79e6e3885ce8ebdcf85 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.7E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_16610 70cad764e43df79e6e3885ce8ebdcf85 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.7E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_01385 673a6df933ec36d75792cd484fa8c8f0 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 103 8.5E-7 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DA442_01385 673a6df933ec36d75792cd484fa8c8f0 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 8.3E-223 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 DA442_01385 673a6df933ec36d75792cd484fa8c8f0 443 SMART SM00382 49 332 6.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_01385 673a6df933ec36d75792cd484fa8c8f0 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 171 329 5.7E-43 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DA442_01385 673a6df933ec36d75792cd484fa8c8f0 443 SUPERFAMILY SSF52540 3 441 2.75E-94 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_01385 673a6df933ec36d75792cd484fa8c8f0 443 SMART SM01086 335 429 8.5E-20 T 14-10-2018 IPR019489 Clp ATPase, C-terminal DA442_01385 673a6df933ec36d75792cd484fa8c8f0 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 43.135 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 DA442_01385 673a6df933ec36d75792cd484fa8c8f0 443 Gene3D G3DSA:1.10.8.60 335 440 2.5E-39 T 14-10-2018 DA442_01385 673a6df933ec36d75792cd484fa8c8f0 443 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 335 404 9.8E-5 T 14-10-2018 IPR019489 Clp ATPase, C-terminal DA442_24235 196bd39b1e8dbca46e9d3cc036e4c97b 337 SUPERFAMILY SSF55073 183 335 1.73E-43 T 14-10-2018 IPR029787 Nucleotide cyclase DA442_24235 196bd39b1e8dbca46e9d3cc036e4c97b 337 Gene3D G3DSA:3.30.70.270 164 336 3.8E-50 T 14-10-2018 DA442_24235 196bd39b1e8dbca46e9d3cc036e4c97b 337 Pfam PF00990 Diguanylate cyclase, GGDEF domain 178 333 6.3E-41 T 14-10-2018 IPR000160 GGDEF domain DA442_24235 196bd39b1e8dbca46e9d3cc036e4c97b 337 SMART SM00267 167 337 3.1E-48 T 14-10-2018 IPR000160 GGDEF domain DA442_24235 196bd39b1e8dbca46e9d3cc036e4c97b 337 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 175 334 7.8E-42 T 14-10-2018 IPR000160 GGDEF domain DA442_24135 4adaacb8857521163aa3b64d1549cdab 451 Pfam PF02954 Bacterial regulatory protein, Fis family 402 441 3.1E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DA442_24135 4adaacb8857521163aa3b64d1549cdab 451 SMART SM00448 7 118 4.9E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_24135 4adaacb8857521163aa3b64d1549cdab 451 SUPERFAMILY SSF46689 391 443 8.51E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_24135 4adaacb8857521163aa3b64d1549cdab 451 Gene3D G3DSA:3.40.50.300 136 315 1.1E-58 T 14-10-2018 DA442_24135 4adaacb8857521163aa3b64d1549cdab 451 Gene3D G3DSA:1.10.10.60 382 446 7.6E-7 T 14-10-2018 DA442_24135 4adaacb8857521163aa3b64d1549cdab 451 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site DA442_24135 4adaacb8857521163aa3b64d1549cdab 451 Gene3D G3DSA:3.40.50.2300 2 134 2.2E-33 T 14-10-2018 DA442_24135 4adaacb8857521163aa3b64d1549cdab 451 Gene3D G3DSA:1.10.8.60 316 376 2.0E-12 T 14-10-2018 DA442_24135 4adaacb8857521163aa3b64d1549cdab 451 SUPERFAMILY SSF52540 148 370 3.23E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_24135 4adaacb8857521163aa3b64d1549cdab 451 Pfam PF00072 Response regulator receiver domain 9 118 5.6E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_24135 4adaacb8857521163aa3b64d1549cdab 451 SMART SM00382 168 308 3.6E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_24135 4adaacb8857521163aa3b64d1549cdab 451 Pfam PF00158 Sigma-54 interaction domain 148 311 1.0E-64 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DA442_24135 4adaacb8857521163aa3b64d1549cdab 451 SUPERFAMILY SSF52172 6 191 6.97E-39 T 14-10-2018 IPR011006 CheY-like superfamily DA442_24135 4adaacb8857521163aa3b64d1549cdab 451 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 234 249 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DA442_10785 984fd18ce40e39dc98dbdbe22d2d6287 218 Pfam PF00753 Metallo-beta-lactamase superfamily 14 195 7.1E-29 T 14-10-2018 IPR001279 Metallo-beta-lactamase DA442_10785 984fd18ce40e39dc98dbdbe22d2d6287 218 SMART SM00849 14 195 1.2E-38 T 14-10-2018 IPR001279 Metallo-beta-lactamase DA442_10785 984fd18ce40e39dc98dbdbe22d2d6287 218 Gene3D G3DSA:3.60.15.10 3 213 7.5E-76 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DA442_10785 984fd18ce40e39dc98dbdbe22d2d6287 218 SUPERFAMILY SSF56281 5 211 3.52E-54 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DA442_14685 d5b74c542b2c956b1e8521ecc595539b 288 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 149 183 - T 14-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 DA442_14685 d5b74c542b2c956b1e8521ecc595539b 288 SUPERFAMILY SSF50182 120 185 4.58E-18 T 14-10-2018 IPR010920 LSM domain superfamily DA442_14685 d5b74c542b2c956b1e8521ecc595539b 288 Pfam PF05552 Conserved TM helix 21 69 7.7E-13 T 14-10-2018 IPR008910 Conserved TM helix DA442_14685 d5b74c542b2c956b1e8521ecc595539b 288 Gene3D G3DSA:3.30.70.100 185 279 7.2E-28 T 14-10-2018 DA442_14685 d5b74c542b2c956b1e8521ecc595539b 288 Gene3D G3DSA:2.30.30.60 135 184 5.2E-23 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily DA442_14685 d5b74c542b2c956b1e8521ecc595539b 288 SUPERFAMILY SSF82689 187 284 5.62E-34 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 DA442_14685 d5b74c542b2c956b1e8521ecc595539b 288 SUPERFAMILY SSF82861 33 118 1.31E-17 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 DA442_14685 d5b74c542b2c956b1e8521ecc595539b 288 Pfam PF00924 Mechanosensitive ion channel 77 274 3.8E-58 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 DA442_16720 ccdf269549702356b9972cbe6a65850a 227 Gene3D G3DSA:3.40.50.620 2 145 2.7E-15 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DA442_16720 ccdf269549702356b9972cbe6a65850a 227 Pfam PF01902 Diphthamide synthase 6 215 7.5E-22 T 14-10-2018 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 DA442_16720 ccdf269549702356b9972cbe6a65850a 227 SUPERFAMILY SSF52402 4 222 1.98E-53 T 14-10-2018 DA442_16720 ccdf269549702356b9972cbe6a65850a 227 Gene3D G3DSA:3.90.1490.10 146 226 4.4E-8 T 14-10-2018 DA442_12960 c685fa5e181f6217b2e906a8f7177593 414 Pfam PF03116 NQR2, RnfD, RnfE family 41 405 6.4E-108 T 14-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 DA442_12960 c685fa5e181f6217b2e906a8f7177593 414 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 408 1.4E-204 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 DA442_12960 c685fa5e181f6217b2e906a8f7177593 414 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 412 36.536 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 DA442_12960 c685fa5e181f6217b2e906a8f7177593 414 PIRSF PIRSF016055 1 414 2.0E-200 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 DA442_01820 f83487a10c5292be53082adfe164585a 332 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 8 327 4.9E-125 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 DA442_01820 f83487a10c5292be53082adfe164585a 332 Gene3D G3DSA:3.40.718.10 1 332 9.1E-120 T 14-10-2018 DA442_01820 f83487a10c5292be53082adfe164585a 332 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 35 324 1.5E-104 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 DA442_01820 f83487a10c5292be53082adfe164585a 332 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 6 331 36.187 T 14-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 DA442_01820 f83487a10c5292be53082adfe164585a 332 SUPERFAMILY SSF53659 6 330 3.84E-109 T 14-10-2018 DA442_22235 afbe8d3e51591849a21f4331b4231c9a 143 Gene3D G3DSA:2.30.29.50 22 143 3.1E-38 T 14-10-2018 IPR037063 Bacterial Pleckstrin homology domain superfamily DA442_22235 afbe8d3e51591849a21f4331b4231c9a 143 Pfam PF08000 Bacterial PH domain 23 140 2.9E-40 T 14-10-2018 IPR012544 Bacterial Pleckstrin homology domain DA442_22235 afbe8d3e51591849a21f4331b4231c9a 143 SUPERFAMILY SSF50729 28 142 3.63E-40 T 14-10-2018 DA442_03255 5ae2047e3a3ec35f77dfe0f763daed16 581 SUPERFAMILY SSF51556 97 538 5.45E-22 T 14-10-2018 IPR032466 Metal-dependent hydrolase DA442_03255 5ae2047e3a3ec35f77dfe0f763daed16 581 Gene3D G3DSA:3.20.20.140 98 537 1.9E-132 T 14-10-2018 DA442_03255 5ae2047e3a3ec35f77dfe0f763daed16 581 SUPERFAMILY SSF51338 36 579 1.18E-14 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DA442_03255 5ae2047e3a3ec35f77dfe0f763daed16 581 Pfam PF07969 Amidohydrolase family 86 578 2.5E-130 T 14-10-2018 IPR013108 Amidohydrolase 3 DA442_03255 5ae2047e3a3ec35f77dfe0f763daed16 581 Gene3D G3DSA:3.10.310.70 116 246 1.9E-132 T 14-10-2018 DA442_03255 5ae2047e3a3ec35f77dfe0f763daed16 581 Gene3D G3DSA:2.30.40.10 44 555 1.9E-132 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DA442_06430 905b02a1075e31b6becbd19817cc7150 411 Gene3D G3DSA:3.40.640.10 33 289 5.4E-136 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_06430 905b02a1075e31b6becbd19817cc7150 411 SUPERFAMILY SSF53383 3 410 1.28E-97 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_06430 905b02a1075e31b6becbd19817cc7150 411 Gene3D G3DSA:3.90.1150.10 24 405 5.4E-136 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DA442_06430 905b02a1075e31b6becbd19817cc7150 411 Pfam PF00266 Aminotransferase class-V 26 401 5.9E-69 T 14-10-2018 IPR000192 Aminotransferase class V domain DA442_06430 905b02a1075e31b6becbd19817cc7150 411 TIGRFAM TIGR01976 am_tr_V_VC1184: cysteine desulfurase family protein 3 404 8.9E-167 T 14-10-2018 IPR011340 Cysteine desulfurase-related DA442_11205 2b1544130f9e2992442c304610381bbb 174 Gene3D G3DSA:3.40.50.850 1 174 3.5E-42 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DA442_11205 2b1544130f9e2992442c304610381bbb 174 Pfam PF00857 Isochorismatase family 4 159 1.4E-34 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 DA442_11205 2b1544130f9e2992442c304610381bbb 174 SUPERFAMILY SSF52499 2 162 5.89E-48 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DA442_01420 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.3E-18 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01420 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.3E-18 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01420 b67c847ad62a5c40d2c05037ccb34615 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.3E-18 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01420 b67c847ad62a5c40d2c05037ccb34615 103 SUPERFAMILY SSF54999 5 101 7.06E-37 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily DA442_01420 b67c847ad62a5c40d2c05037ccb34615 103 Gene3D G3DSA:3.30.70.600 1 103 2.2E-38 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily DA442_01420 b67c847ad62a5c40d2c05037ccb34615 103 SMART SM01403 7 101 6.6E-56 T 14-10-2018 IPR027486 Ribosomal protein S10 domain DA442_01420 b67c847ad62a5c40d2c05037ccb34615 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 2.8E-35 T 14-10-2018 IPR027486 Ribosomal protein S10 domain DA442_01420 b67c847ad62a5c40d2c05037ccb34615 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 14-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01420 b67c847ad62a5c40d2c05037ccb34615 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.1E-45 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01420 b67c847ad62a5c40d2c05037ccb34615 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.839 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_20550 3321560efbe9b7a2f7f1033590b1255f 335 PIRSF PIRSF000267 1 335 3.1E-90 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 DA442_20550 3321560efbe9b7a2f7f1033590b1255f 335 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 5 213 8.3E-44 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 DA442_20550 3321560efbe9b7a2f7f1033590b1255f 335 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 5 324 1.9E-98 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 DA442_21245 7aa379cd50d3546aaebf4d781e1f2725 118 Gene3D G3DSA:1.10.3830.10 3 118 1.7E-39 T 14-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 DA442_21245 7aa379cd50d3546aaebf4d781e1f2725 118 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 70 81 - T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 DA442_21245 7aa379cd50d3546aaebf4d781e1f2725 118 Pfam PF01219 Prokaryotic diacylglycerol kinase 16 115 4.8E-35 T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 DA442_03645 cdfb8f6d7ead8624ccd45db5a9d3d369 561 Gene3D G3DSA:3.90.400.10 112 175 6.7E-30 T 14-10-2018 DA442_03645 cdfb8f6d7ead8624ccd45db5a9d3d369 561 Gene3D G3DSA:3.20.20.80 176 480 7.3E-116 T 14-10-2018 DA442_03645 cdfb8f6d7ead8624ccd45db5a9d3d369 561 Pfam PF00128 Alpha amylase, catalytic domain 33 376 5.4E-128 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DA442_03645 cdfb8f6d7ead8624ccd45db5a9d3d369 561 SMART SM00642 18 419 3.5E-164 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DA442_03645 cdfb8f6d7ead8624ccd45db5a9d3d369 561 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 10 557 8.2E-268 T 14-10-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 DA442_03645 cdfb8f6d7ead8624ccd45db5a9d3d369 561 SUPERFAMILY SSF51445 9 477 2.65E-164 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DA442_03645 cdfb8f6d7ead8624ccd45db5a9d3d369 561 SUPERFAMILY SSF51011 480 559 3.69E-16 T 14-10-2018 DA442_03645 cdfb8f6d7ead8624ccd45db5a9d3d369 561 Gene3D G3DSA:2.60.40.1180 481 559 3.5E-18 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta DA442_03645 cdfb8f6d7ead8624ccd45db5a9d3d369 561 Pfam PF16657 Maltogenic Amylase, C-terminal domain 480 555 5.0E-9 T 14-10-2018 IPR032091 Maltogenic Amylase, C-terminal DA442_03645 cdfb8f6d7ead8624ccd45db5a9d3d369 561 Gene3D G3DSA:3.20.20.80 1 111 3.3E-51 T 14-10-2018 DA442_03235 639ea916e0400f05928f47f3721bc1a9 307 Gene3D G3DSA:3.40.190.10 162 276 3.5E-45 T 14-10-2018 DA442_03235 639ea916e0400f05928f47f3721bc1a9 307 Gene3D G3DSA:3.40.190.10 102 299 3.5E-45 T 14-10-2018 DA442_03235 639ea916e0400f05928f47f3721bc1a9 307 Gene3D G3DSA:1.10.10.10 7 96 1.0E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_03235 639ea916e0400f05928f47f3721bc1a9 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_03235 639ea916e0400f05928f47f3721bc1a9 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_03235 639ea916e0400f05928f47f3721bc1a9 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_03235 639ea916e0400f05928f47f3721bc1a9 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 65 2.6E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_03235 639ea916e0400f05928f47f3721bc1a9 307 SUPERFAMILY SSF46785 10 112 8.0E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_03235 639ea916e0400f05928f47f3721bc1a9 307 Pfam PF03466 LysR substrate binding domain 94 300 4.5E-22 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_03235 639ea916e0400f05928f47f3721bc1a9 307 SUPERFAMILY SSF53850 94 304 2.71E-24 T 14-10-2018 DA442_03035 2861b4b0dae83798aa59fa43cf4193cc 152 Gene3D G3DSA:3.10.580.10 1 152 5.7E-49 T 14-10-2018 DA442_03035 2861b4b0dae83798aa59fa43cf4193cc 152 SMART SM00116 11 59 7.4E-9 T 14-10-2018 IPR000644 CBS domain DA442_03035 2861b4b0dae83798aa59fa43cf4193cc 152 SMART SM00116 84 131 1.3E-5 T 14-10-2018 IPR000644 CBS domain DA442_03035 2861b4b0dae83798aa59fa43cf4193cc 152 Pfam PF00571 CBS domain 4 58 2.3E-12 T 14-10-2018 IPR000644 CBS domain DA442_03035 2861b4b0dae83798aa59fa43cf4193cc 152 Pfam PF00571 CBS domain 79 127 3.2E-8 T 14-10-2018 IPR000644 CBS domain DA442_03035 2861b4b0dae83798aa59fa43cf4193cc 152 SUPERFAMILY SSF54631 1 132 1.07E-31 T 14-10-2018 DA442_02325 27127fcdd94d49d4920e644610f7118e 316 Gene3D G3DSA:3.40.50.150 10 315 6.1E-102 T 14-10-2018 DA442_02325 27127fcdd94d49d4920e644610f7118e 316 PIRSF PIRSF004486 1 316 1.7E-101 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 DA442_02325 27127fcdd94d49d4920e644610f7118e 316 SUPERFAMILY SSF81799 113 216 3.53E-31 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 DA442_02325 27127fcdd94d49d4920e644610f7118e 316 Gene3D G3DSA:1.10.150.170 112 218 6.1E-102 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 DA442_02325 27127fcdd94d49d4920e644610f7118e 316 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 316 38.128 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 DA442_02325 27127fcdd94d49d4920e644610f7118e 316 Pfam PF01795 MraW methylase family 5 315 4.6E-110 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 DA442_02325 27127fcdd94d49d4920e644610f7118e 316 SUPERFAMILY SSF53335 7 316 6.94E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_02325 27127fcdd94d49d4920e644610f7118e 316 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 315 4.3E-119 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 DA442_15680 8dc45d9a0c86e54ea31426253dc3440f 378 Gene3D G3DSA:3.30.70.360 177 292 3.3E-79 T 14-10-2018 DA442_15680 8dc45d9a0c86e54ea31426253dc3440f 378 Pfam PF01546 Peptidase family M20/M25/M40 72 373 4.5E-32 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 DA442_15680 8dc45d9a0c86e54ea31426253dc3440f 378 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 71 80 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 DA442_15680 8dc45d9a0c86e54ea31426253dc3440f 378 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 106 143 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 DA442_15680 8dc45d9a0c86e54ea31426253dc3440f 378 Pfam PF07687 Peptidase dimerisation domain 174 285 9.6E-26 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain DA442_15680 8dc45d9a0c86e54ea31426253dc3440f 378 SUPERFAMILY SSF53187 3 377 1.49E-56 T 14-10-2018 DA442_15680 8dc45d9a0c86e54ea31426253dc3440f 378 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 8 372 9.4E-128 T 14-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 DA442_15680 8dc45d9a0c86e54ea31426253dc3440f 378 Gene3D G3DSA:3.40.630.10 28 360 3.3E-79 T 14-10-2018 DA442_15680 8dc45d9a0c86e54ea31426253dc3440f 378 Hamap MF_01108 Acetylornithine deacetylase [argE]. 1 378 66.203 T 14-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 DA442_15680 8dc45d9a0c86e54ea31426253dc3440f 378 SUPERFAMILY SSF55031 177 290 1.21E-22 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DA442_18580 ddc4e67b81f4e3e2edb4036ccc9af4a3 206 Gene3D G3DSA:1.10.10.10 133 198 1.1E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_18580 ddc4e67b81f4e3e2edb4036ccc9af4a3 206 SMART SM00448 6 119 3.9E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_18580 ddc4e67b81f4e3e2edb4036ccc9af4a3 206 SUPERFAMILY SSF46894 134 196 1.19E-15 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DA442_18580 ddc4e67b81f4e3e2edb4036ccc9af4a3 206 Pfam PF00072 Response regulator receiver domain 8 119 1.8E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_18580 ddc4e67b81f4e3e2edb4036ccc9af4a3 206 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 2.1E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_18580 ddc4e67b81f4e3e2edb4036ccc9af4a3 206 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 2.1E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_18580 ddc4e67b81f4e3e2edb4036ccc9af4a3 206 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 2.1E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_18580 ddc4e67b81f4e3e2edb4036ccc9af4a3 206 SUPERFAMILY SSF52172 7 132 4.84E-22 T 14-10-2018 IPR011006 CheY-like superfamily DA442_18580 ddc4e67b81f4e3e2edb4036ccc9af4a3 206 Gene3D G3DSA:3.40.50.2300 7 132 5.0E-21 T 14-10-2018 DA442_18580 ddc4e67b81f4e3e2edb4036ccc9af4a3 206 Pfam PF00196 Bacterial regulatory proteins, luxR family 141 194 1.8E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_18580 ddc4e67b81f4e3e2edb4036ccc9af4a3 206 SMART SM00421 139 196 2.1E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_18580 ddc4e67b81f4e3e2edb4036ccc9af4a3 206 ProSitePatterns PS00622 LuxR-type HTH domain signature. 156 183 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_16320 8dd36f5fbf64a87e5eb40e7be69561b9 1143 Gene3D G3DSA:3.30.450.20 616 745 2.7E-11 T 14-10-2018 DA442_16320 8dd36f5fbf64a87e5eb40e7be69561b9 1143 SMART SM00448 1026 1139 1.1E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_16320 8dd36f5fbf64a87e5eb40e7be69561b9 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 966 984 1.3E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_16320 8dd36f5fbf64a87e5eb40e7be69561b9 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 933 947 1.3E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_16320 8dd36f5fbf64a87e5eb40e7be69561b9 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 990 1003 1.3E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_16320 8dd36f5fbf64a87e5eb40e7be69561b9 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 951 961 1.3E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_16320 8dd36f5fbf64a87e5eb40e7be69561b9 1143 Pfam PF12860 PAS fold 634 748 1.0E-43 T 14-10-2018 DA442_16320 8dd36f5fbf64a87e5eb40e7be69561b9 1143 SUPERFAMILY SSF55874 843 1002 7.6E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_16320 8dd36f5fbf64a87e5eb40e7be69561b9 1143 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 898 1004 4.3E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_16320 8dd36f5fbf64a87e5eb40e7be69561b9 1143 Gene3D G3DSA:3.40.50.2300 1011 1143 6.0E-18 T 14-10-2018 DA442_16320 8dd36f5fbf64a87e5eb40e7be69561b9 1143 Gene3D G3DSA:3.30.565.10 852 1007 4.8E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_16320 8dd36f5fbf64a87e5eb40e7be69561b9 1143 SUPERFAMILY SSF52172 1026 1142 1.07E-19 T 14-10-2018 IPR011006 CheY-like superfamily DA442_16320 8dd36f5fbf64a87e5eb40e7be69561b9 1143 SUPERFAMILY SSF47384 774 854 2.75E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DA442_16320 8dd36f5fbf64a87e5eb40e7be69561b9 1143 Gene3D G3DSA:1.20.1730.10 34 509 6.4E-8 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily DA442_16320 8dd36f5fbf64a87e5eb40e7be69561b9 1143 Gene3D G3DSA:1.10.287.130 746 851 2.1E-14 T 14-10-2018 DA442_16320 8dd36f5fbf64a87e5eb40e7be69561b9 1143 Pfam PF00072 Response regulator receiver domain 1028 1139 3.1E-12 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_16320 8dd36f5fbf64a87e5eb40e7be69561b9 1143 SUPERFAMILY SSF55785 626 741 1.74E-8 T 14-10-2018 IPR035965 PAS domain superfamily DA442_16320 8dd36f5fbf64a87e5eb40e7be69561b9 1143 SMART SM00388 788 853 8.0E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_16320 8dd36f5fbf64a87e5eb40e7be69561b9 1143 Pfam PF00512 His Kinase A (phospho-acceptor) domain 788 853 2.9E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_16320 8dd36f5fbf64a87e5eb40e7be69561b9 1143 SMART SM00387 897 1006 5.0E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_11055 68587981dcb3823f9a8ef8ff92862a1b 513 Pfam PF00501 AMP-binding enzyme 8 416 3.7E-113 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DA442_11055 68587981dcb3823f9a8ef8ff92862a1b 513 Gene3D G3DSA:3.30.300.310 412 512 9.6E-31 T 14-10-2018 DA442_11055 68587981dcb3823f9a8ef8ff92862a1b 513 Pfam PF13193 AMP-binding enzyme C-terminal domain 425 500 9.4E-18 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain DA442_11055 68587981dcb3823f9a8ef8ff92862a1b 513 SUPERFAMILY SSF56801 4 509 1.44E-159 T 14-10-2018 DA442_11055 68587981dcb3823f9a8ef8ff92862a1b 513 ProSitePatterns PS00455 Putative AMP-binding domain signature. 173 184 - T 14-10-2018 IPR020845 AMP-binding, conserved site DA442_11055 68587981dcb3823f9a8ef8ff92862a1b 513 Gene3D G3DSA:3.40.50.12780 1 409 2.0E-125 T 14-10-2018 DA442_13285 8700fdfc601d2f77e70b770080aa5207 338 Pfam PF13432 Tetratricopeptide repeat 187 247 0.0012 T 14-10-2018 DA442_13285 8700fdfc601d2f77e70b770080aa5207 338 SUPERFAMILY SSF48452 46 323 8.22E-26 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_13285 8700fdfc601d2f77e70b770080aa5207 338 SMART SM00028 85 118 2.9 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_13285 8700fdfc601d2f77e70b770080aa5207 338 SMART SM00028 119 152 160.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_13285 8700fdfc601d2f77e70b770080aa5207 338 SMART SM00028 278 311 9.3E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_13285 8700fdfc601d2f77e70b770080aa5207 338 SMART SM00028 180 213 6.7 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_13285 8700fdfc601d2f77e70b770080aa5207 338 SMART SM00028 214 247 0.014 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_13285 8700fdfc601d2f77e70b770080aa5207 338 Pfam PF13181 Tetratricopeptide repeat 87 118 0.16 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_13285 8700fdfc601d2f77e70b770080aa5207 338 Gene3D G3DSA:1.25.40.10 165 336 2.0E-28 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_13285 8700fdfc601d2f77e70b770080aa5207 338 Pfam PF07719 Tetratricopeptide repeat 278 310 2.8E-5 T 14-10-2018 IPR013105 Tetratricopeptide repeat 2 DA442_13285 8700fdfc601d2f77e70b770080aa5207 338 Gene3D G3DSA:1.25.40.10 22 154 1.9E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_12820 90c04f1455013630c1a99104551f1ccc 246 SUPERFAMILY SSF55120 3 243 5.44E-64 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_12820 90c04f1455013630c1a99104551f1ccc 246 Gene3D G3DSA:3.30.2350.10 2 228 4.0E-61 T 14-10-2018 DA442_12820 90c04f1455013630c1a99104551f1ccc 246 Pfam PF00849 RNA pseudouridylate synthase 15 174 1.3E-32 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_12820 90c04f1455013630c1a99104551f1ccc 246 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 54 68 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_14260 b9a9e53ed694c8ccd835d0c3d038d5bc 407 Gene3D G3DSA:1.20.81.30 259 370 4.7E-27 T 14-10-2018 DA442_14260 b9a9e53ed694c8ccd835d0c3d038d5bc 407 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 167 195 - T 14-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 DA442_14260 b9a9e53ed694c8ccd835d0c3d038d5bc 407 Gene3D G3DSA:1.20.81.30 58 174 4.2E-30 T 14-10-2018 DA442_14260 b9a9e53ed694c8ccd835d0c3d038d5bc 407 Pfam PF00482 Type II secretion system (T2SS), protein F 276 398 1.3E-27 T 14-10-2018 IPR018076 Type II secretion system F domain DA442_14260 b9a9e53ed694c8ccd835d0c3d038d5bc 407 Pfam PF00482 Type II secretion system (T2SS), protein F 72 195 2.4E-33 T 14-10-2018 IPR018076 Type II secretion system F domain DA442_14260 b9a9e53ed694c8ccd835d0c3d038d5bc 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 387 406 1.0E-18 T 14-10-2018 IPR003004 GspF/PilC family DA442_14260 b9a9e53ed694c8ccd835d0c3d038d5bc 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 371 385 1.0E-18 T 14-10-2018 IPR003004 GspF/PilC family DA442_14260 b9a9e53ed694c8ccd835d0c3d038d5bc 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 68 80 1.0E-18 T 14-10-2018 IPR003004 GspF/PilC family DA442_14260 b9a9e53ed694c8ccd835d0c3d038d5bc 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 167 195 1.0E-18 T 14-10-2018 IPR003004 GspF/PilC family DA442_12240 3c59fb7317280b84cb0f6ec3439d397f 435 SUPERFAMILY SSF53901 14 293 1.46E-59 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DA442_12240 3c59fb7317280b84cb0f6ec3439d397f 435 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 16 433 4.3E-125 T 14-10-2018 IPR002155 Thiolase GO:0016747 DA442_12240 3c59fb7317280b84cb0f6ec3439d397f 435 Gene3D G3DSA:3.40.47.10 4 434 1.7E-109 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DA442_12240 3c59fb7317280b84cb0f6ec3439d397f 435 SUPERFAMILY SSF53901 296 434 1.18E-30 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DA442_12240 3c59fb7317280b84cb0f6ec3439d397f 435 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 6 435 4.0E-267 T 14-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 DA442_12240 3c59fb7317280b84cb0f6ec3439d397f 435 PIRSF PIRSF000429 8 435 2.4E-118 T 14-10-2018 IPR002155 Thiolase GO:0016747 DA442_12240 3c59fb7317280b84cb0f6ec3439d397f 435 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 1 435 65.118 T 14-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 DA442_12240 3c59fb7317280b84cb0f6ec3439d397f 435 Pfam PF02803 Thiolase, C-terminal domain 295 433 8.1E-36 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 DA442_12240 3c59fb7317280b84cb0f6ec3439d397f 435 ProSitePatterns PS00737 Thiolases signature 2. 381 397 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 DA442_12240 3c59fb7317280b84cb0f6ec3439d397f 435 Pfam PF00108 Thiolase, N-terminal domain 14 286 3.3E-62 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 DA442_13270 92e1f72b3ab9c6e54ca8214dee63850a 306 SUPERFAMILY SSF53850 94 299 7.24E-37 T 14-10-2018 DA442_13270 92e1f72b3ab9c6e54ca8214dee63850a 306 Gene3D G3DSA:3.40.190.10 101 297 1.6E-45 T 14-10-2018 DA442_13270 92e1f72b3ab9c6e54ca8214dee63850a 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 70 2.0E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_13270 92e1f72b3ab9c6e54ca8214dee63850a 306 Gene3D G3DSA:1.10.10.10 3 92 7.8E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_13270 92e1f72b3ab9c6e54ca8214dee63850a 306 SUPERFAMILY SSF46785 7 85 4.22E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_13270 92e1f72b3ab9c6e54ca8214dee63850a 306 Gene3D G3DSA:3.40.190.10 175 273 1.6E-45 T 14-10-2018 DA442_13270 92e1f72b3ab9c6e54ca8214dee63850a 306 Pfam PF03466 LysR substrate binding domain 100 289 5.9E-25 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_01015 be994cd2a81ed9759c965cb15603fc4d 557 SUPERFAMILY SSF58104 248 557 1.96E-73 T 14-10-2018 DA442_01015 be994cd2a81ed9759c965cb15603fc4d 557 Pfam PF00672 HAMP domain 229 276 9.9E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_01015 be994cd2a81ed9759c965cb15603fc4d 557 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 361 523 1.4E-38 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_01015 be994cd2a81ed9759c965cb15603fc4d 557 Pfam PF17200 Single Cache domain 2 47 189 2.4E-38 T 14-10-2018 IPR033480 Single Cache domain 2 DA442_01015 be994cd2a81ed9759c965cb15603fc4d 557 SMART SM01049 44 133 9.5E-32 T 14-10-2018 IPR033480 Single Cache domain 2 DA442_01015 be994cd2a81ed9759c965cb15603fc4d 557 SMART SM00283 295 556 2.3E-58 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_01015 be994cd2a81ed9759c965cb15603fc4d 557 Gene3D G3DSA:1.10.287.950 226 557 7.6E-71 T 14-10-2018 DA442_01015 be994cd2a81ed9759c965cb15603fc4d 557 SMART SM00304 226 280 2.1E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_01015 be994cd2a81ed9759c965cb15603fc4d 557 Gene3D G3DSA:3.30.450.20 38 183 1.1E-55 T 14-10-2018 DA442_07385 3033e61b4c8285bb5530f9d4c1c92ea9 764 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 149 600 4.4E-164 T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 DA442_07385 3033e61b4c8285bb5530f9d4c1c92ea9 764 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 29 143 4.5E-20 T 14-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 DA442_07385 3033e61b4c8285bb5530f9d4c1c92ea9 764 Gene3D G3DSA:3.40.50.2300 11 148 4.5E-36 T 14-10-2018 DA442_07385 3033e61b4c8285bb5530f9d4c1c92ea9 764 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 391 405 - T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 DA442_07385 3033e61b4c8285bb5530f9d4c1c92ea9 764 Gene3D G3DSA:3.90.1150.10 451 640 3.4E-73 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DA442_07385 3033e61b4c8285bb5530f9d4c1c92ea9 764 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 625 754 2.8E-44 T 14-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 DA442_07385 3033e61b4c8285bb5530f9d4c1c92ea9 764 Gene3D G3DSA:3.90.100.10 641 764 3.3E-45 T 14-10-2018 DA442_07385 3033e61b4c8285bb5530f9d4c1c92ea9 764 PIRSF PIRSF009393 8 764 3.3E-256 T 14-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 DA442_07385 3033e61b4c8285bb5530f9d4c1c92ea9 764 SUPERFAMILY SSF53383 149 617 1.45E-95 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_07385 3033e61b4c8285bb5530f9d4c1c92ea9 764 Gene3D G3DSA:3.40.640.10 149 450 7.0E-89 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_07385 3033e61b4c8285bb5530f9d4c1c92ea9 764 SUPERFAMILY SSF55904 620 756 4.71E-35 T 14-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 DA442_15230 3dd93f1149178c8610a06ecc365b8f30 458 Gene3D G3DSA:3.40.50.1010 3 155 9.0E-28 T 14-10-2018 DA442_15230 3dd93f1149178c8610a06ecc365b8f30 458 SUPERFAMILY SSF88723 7 160 4.12E-14 T 14-10-2018 IPR029060 PIN-like domain superfamily DA442_15230 3dd93f1149178c8610a06ecc365b8f30 458 SMART SM00670 7 141 1.8E-10 T 14-10-2018 IPR002716 PIN domain DA442_15230 3dd93f1149178c8610a06ecc365b8f30 458 Gene3D G3DSA:3.40.50.300 245 456 1.4E-65 T 14-10-2018 DA442_15230 3dd93f1149178c8610a06ecc365b8f30 458 SUPERFAMILY SSF52540 247 437 1.68E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_15230 3dd93f1149178c8610a06ecc365b8f30 458 Pfam PF13638 PIN domain 9 150 5.4E-35 T 14-10-2018 IPR002716 PIN domain DA442_15230 3dd93f1149178c8610a06ecc365b8f30 458 Pfam PF02562 PhoH-like protein 248 452 8.4E-54 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 DA442_25650 6db667d84ea350eb7aa22cdf9c003728 263 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 260 5.0E-33 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 DA442_25650 6db667d84ea350eb7aa22cdf9c003728 263 Gene3D G3DSA:3.10.310.10 6 259 1.7E-83 T 14-10-2018 DA442_25650 6db667d84ea350eb7aa22cdf9c003728 263 PIRSF PIRSF016184 1 263 1.7E-49 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 DA442_25650 6db667d84ea350eb7aa22cdf9c003728 263 Pfam PF02567 Phenazine biosynthesis-like protein 8 259 7.6E-57 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 DA442_25650 6db667d84ea350eb7aa22cdf9c003728 263 Gene3D G3DSA:3.10.310.10 119 251 1.7E-83 T 14-10-2018 DA442_25650 6db667d84ea350eb7aa22cdf9c003728 263 SUPERFAMILY SSF54506 1 263 4.12E-77 T 14-10-2018 DA442_24330 a2b0b36209dfdea9af7ba2aefadbfd39 239 SMART SM01057 23 239 5.4E-95 T 14-10-2018 IPR001148 Alpha carbonic anhydrase domain DA442_24330 a2b0b36209dfdea9af7ba2aefadbfd39 239 ProSitePatterns PS00162 Alpha-carbonic anhydrases signature. 110 126 - T 14-10-2018 IPR018338 Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117|Reactome: R-HSA-1475029 DA442_24330 a2b0b36209dfdea9af7ba2aefadbfd39 239 SUPERFAMILY SSF51069 22 237 6.02E-75 T 14-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily DA442_24330 a2b0b36209dfdea9af7ba2aefadbfd39 239 Gene3D G3DSA:3.10.200.10 22 238 2.4E-82 T 14-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily DA442_24330 a2b0b36209dfdea9af7ba2aefadbfd39 239 Pfam PF00194 Eukaryotic-type carbonic anhydrase 22 238 6.0E-51 T 14-10-2018 IPR001148 Alpha carbonic anhydrase domain DA442_24615 d0923bf98f1b713d77aaed41b2792ec8 339 SMART SM01240 26 339 0.0015 T 14-10-2018 DA442_24615 d0923bf98f1b713d77aaed41b2792ec8 339 PIRSF PIRSF003314 1 339 6.2E-119 T 14-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 DA442_24615 d0923bf98f1b713d77aaed41b2792ec8 339 SUPERFAMILY SSF51395 26 338 2.29E-77 T 14-10-2018 DA442_24615 d0923bf98f1b713d77aaed41b2792ec8 339 Hamap MF_00354 Isopentenyl-diphosphate delta-isomerase [fni]. 4 338 38.3 T 14-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 DA442_24615 d0923bf98f1b713d77aaed41b2792ec8 339 Gene3D G3DSA:3.20.20.70 3 339 1.4E-118 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_24615 d0923bf98f1b713d77aaed41b2792ec8 339 Pfam PF01070 FMN-dependent dehydrogenase 16 106 6.0E-11 T 14-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 DA442_24615 d0923bf98f1b713d77aaed41b2792ec8 339 Pfam PF01070 FMN-dependent dehydrogenase 171 335 8.3E-18 T 14-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 DA442_24615 d0923bf98f1b713d77aaed41b2792ec8 339 TIGRFAM TIGR02151 IPP_isom_2: isopentenyl-diphosphate delta-isomerase, type 2 6 337 9.4E-116 T 14-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 DA442_11860 bbf96b81fc3521e656f2baa37947ec99 900 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 719 739 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 DA442_11860 bbf96b81fc3521e656f2baa37947ec99 900 Gene3D G3DSA:3.40.50.1970 456 642 9.9E-58 T 14-10-2018 DA442_11860 bbf96b81fc3521e656f2baa37947ec99 900 PIRSF PIRSF000111 1 865 0.0 T 14-10-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 DA442_11860 bbf96b81fc3521e656f2baa37947ec99 900 Gene3D G3DSA:1.20.1090.10 643 864 4.0E-59 T 14-10-2018 DA442_11860 bbf96b81fc3521e656f2baa37947ec99 900 Gene3D G3DSA:3.40.605.10 399 455 1.7E-7 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DA442_11860 bbf96b81fc3521e656f2baa37947ec99 900 Pfam PF00171 Aldehyde dehydrogenase family 4 402 2.0E-25 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DA442_11860 bbf96b81fc3521e656f2baa37947ec99 900 Gene3D G3DSA:3.40.605.10 15 216 2.3E-170 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DA442_11860 bbf96b81fc3521e656f2baa37947ec99 900 Pfam PF00465 Iron-containing alcohol dehydrogenase 458 849 1.0E-111 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 DA442_11860 bbf96b81fc3521e656f2baa37947ec99 900 SUPERFAMILY SSF53720 5 454 1.7E-84 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DA442_11860 bbf96b81fc3521e656f2baa37947ec99 900 Gene3D G3DSA:3.40.309.10 217 398 2.3E-170 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DA442_11860 bbf96b81fc3521e656f2baa37947ec99 900 SUPERFAMILY SSF56796 452 863 2.49E-114 T 14-10-2018 DA442_11860 bbf96b81fc3521e656f2baa37947ec99 900 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 631 659 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 DA442_19665 0d9398c0124a54785ad92848718ab87d 364 Gene3D G3DSA:3.40.47.10 1 362 6.1E-155 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DA442_19665 0d9398c0124a54785ad92848718ab87d 364 SUPERFAMILY SSF53901 7 325 3.17E-65 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DA442_19665 0d9398c0124a54785ad92848718ab87d 364 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 4 324 66.664 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DA442_19665 0d9398c0124a54785ad92848718ab87d 364 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 5 324 2.3E-111 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DA442_19665 0d9398c0124a54785ad92848718ab87d 364 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 184 2.2E-28 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DA442_19665 0d9398c0124a54785ad92848718ab87d 364 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 235 324 1.5E-37 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DA442_22450 fa53071857365180487d5bf14c45912e 296 SUPERFAMILY SSF53850 92 293 1.36E-22 T 14-10-2018 DA442_22450 fa53071857365180487d5bf14c45912e 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 2.3E-12 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_22450 fa53071857365180487d5bf14c45912e 296 Gene3D G3DSA:3.40.190.290 96 273 6.8E-18 T 14-10-2018 DA442_22450 fa53071857365180487d5bf14c45912e 296 Gene3D G3DSA:1.10.10.10 1 88 8.5E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_22450 fa53071857365180487d5bf14c45912e 296 Pfam PF03466 LysR substrate binding domain 92 291 2.0E-19 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_22450 fa53071857365180487d5bf14c45912e 296 SUPERFAMILY SSF46785 6 83 6.02E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_11790 e288927910891d0203033d57f6e27cc8 230 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 200 2.8E-65 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 DA442_11790 e288927910891d0203033d57f6e27cc8 230 PIRSF PIRSF006102 1 220 1.8E-78 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 DA442_11790 e288927910891d0203033d57f6e27cc8 230 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 6 208 7.7E-89 T 14-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 DA442_11790 e288927910891d0203033d57f6e27cc8 230 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 210 28.166 T 14-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 DA442_03170 0b506d86d4c0e9db8425f5c07cf76e3a 386 SMART SM00564 107 138 0.013 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DA442_03170 0b506d86d4c0e9db8425f5c07cf76e3a 386 SMART SM00564 191 223 330.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DA442_03170 0b506d86d4c0e9db8425f5c07cf76e3a 386 SMART SM00564 243 274 80.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DA442_03170 0b506d86d4c0e9db8425f5c07cf76e3a 386 SMART SM00564 322 353 0.0084 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DA442_03170 0b506d86d4c0e9db8425f5c07cf76e3a 386 SMART SM00564 63 94 9.8E-6 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DA442_03170 0b506d86d4c0e9db8425f5c07cf76e3a 386 SMART SM00564 147 178 0.25 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DA442_03170 0b506d86d4c0e9db8425f5c07cf76e3a 386 SMART SM00564 280 312 42.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DA442_03170 0b506d86d4c0e9db8425f5c07cf76e3a 386 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 7 382 1.3E-143 T 14-10-2018 IPR017687 Outer membrane protein assembly factor BamB DA442_03170 0b506d86d4c0e9db8425f5c07cf76e3a 386 SUPERFAMILY SSF50998 31 375 5.65E-82 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily DA442_03170 0b506d86d4c0e9db8425f5c07cf76e3a 386 Pfam PF13360 PQQ-like domain 76 310 1.2E-51 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat DA442_03170 0b506d86d4c0e9db8425f5c07cf76e3a 386 Gene3D G3DSA:2.130.10.10 18 385 1.2E-98 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 DA442_03170 0b506d86d4c0e9db8425f5c07cf76e3a 386 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 3 384 40.926 T 14-10-2018 IPR017687 Outer membrane protein assembly factor BamB DA442_12625 944f706234ddec63b812e43ec5f9a102 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 178 339 2.6E-40 T 14-10-2018 IPR010918 PurM-like, C-terminal domain DA442_12625 944f706234ddec63b812e43ec5f9a102 346 Gene3D G3DSA:3.90.650.10 172 346 1.0E-73 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DA442_12625 944f706234ddec63b812e43ec5f9a102 346 SUPERFAMILY SSF55326 8 171 2.99E-54 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DA442_12625 944f706234ddec63b812e43ec5f9a102 346 SUPERFAMILY SSF56042 172 341 2.99E-62 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DA442_12625 944f706234ddec63b812e43ec5f9a102 346 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 335 1.5E-151 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DA442_12625 944f706234ddec63b812e43ec5f9a102 346 Gene3D G3DSA:3.30.1330.10 7 171 3.2E-70 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DA442_12625 944f706234ddec63b812e43ec5f9a102 346 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 345 47.865 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DA442_12625 944f706234ddec63b812e43ec5f9a102 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 60 165 1.1E-15 T 14-10-2018 IPR016188 PurM-like, N-terminal domain DA442_09240 6a733e9f44671fb46338629d06a5d9ec 360 Gene3D G3DSA:3.75.10.10 2 360 1.0E-134 T 14-10-2018 DA442_09240 6a733e9f44671fb46338629d06a5d9ec 360 SUPERFAMILY SSF55909 3 360 9.1E-136 T 14-10-2018 DA442_09240 6a733e9f44671fb46338629d06a5d9ec 360 Hamap MF_01841 Agmatine deiminase [aguA]. 5 360 59.785 T 14-10-2018 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 DA442_09240 6a733e9f44671fb46338629d06a5d9ec 360 TIGRFAM TIGR03380 agmatine_aguA: agmatine deiminase 5 360 2.8E-172 T 14-10-2018 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 DA442_09240 6a733e9f44671fb46338629d06a5d9ec 360 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 14 359 2.2E-118 T 14-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 DA442_05265 a0f8e7d89f8b0dedb59654b0b4e07d08 691 Hamap MF_02205 ATP-dependent DNA helicase DinG [dinG]. 33 690 36.691 T 14-10-2018 IPR039000 ATP-dependent DNA helicase DinG GO:0004003 DA442_05265 a0f8e7d89f8b0dedb59654b0b4e07d08 691 SUPERFAMILY SSF52540 243 666 3.07E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_05265 a0f8e7d89f8b0dedb59654b0b4e07d08 691 Gene3D G3DSA:3.40.50.300 499 689 5.9E-34 T 14-10-2018 DA442_05265 a0f8e7d89f8b0dedb59654b0b4e07d08 691 SMART SM00491 535 671 7.3E-28 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 DA442_05265 a0f8e7d89f8b0dedb59654b0b4e07d08 691 SUPERFAMILY SSF52540 14 666 3.15E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_05265 a0f8e7d89f8b0dedb59654b0b4e07d08 691 Gene3D G3DSA:3.40.50.300 25 304 1.5E-40 T 14-10-2018 DA442_05265 a0f8e7d89f8b0dedb59654b0b4e07d08 691 Pfam PF04851 Type III restriction enzyme, res subunit 24 254 6.3E-5 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 DA442_05265 a0f8e7d89f8b0dedb59654b0b4e07d08 691 Pfam PF13307 Helicase C-terminal domain 526 684 1.4E-36 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 DA442_11825 a4fdb2ec20e9fc2c339bd618b591aed2 214 Hamap MF_00157 Ribonuclease T [rnt]. 1 214 115.515 T 14-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 DA442_11825 a4fdb2ec20e9fc2c339bd618b591aed2 214 Gene3D G3DSA:3.30.420.10 9 214 4.1E-54 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DA442_11825 a4fdb2ec20e9fc2c339bd618b591aed2 214 Pfam PF00929 Exonuclease 20 195 8.1E-46 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DA442_11825 a4fdb2ec20e9fc2c339bd618b591aed2 214 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 209 1.8E-100 T 14-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 DA442_11825 a4fdb2ec20e9fc2c339bd618b591aed2 214 SUPERFAMILY SSF53098 10 208 4.96E-57 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DA442_11825 a4fdb2ec20e9fc2c339bd618b591aed2 214 SMART SM00479 18 204 3.2E-30 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DA442_03890 a415e3867f6b170de669f53bd90f2aa5 314 Gene3D G3DSA:3.40.50.2020 148 290 7.2E-136 T 14-10-2018 DA442_03890 a415e3867f6b170de669f53bd90f2aa5 314 SMART SM01400 4 121 2.0E-77 T 14-10-2018 DA442_03890 a415e3867f6b170de669f53bd90f2aa5 314 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 2.9E-125 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 DA442_03890 a415e3867f6b170de669f53bd90f2aa5 314 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 1.9E-31 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 DA442_03890 a415e3867f6b170de669f53bd90f2aa5 314 SUPERFAMILY SSF53271 69 306 2.56E-67 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like DA442_03890 a415e3867f6b170de669f53bd90f2aa5 314 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 14-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 DA442_03890 a415e3867f6b170de669f53bd90f2aa5 314 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 4 314 49.844 T 14-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 DA442_03890 a415e3867f6b170de669f53bd90f2aa5 314 Gene3D G3DSA:3.40.50.2020 7 302 7.2E-136 T 14-10-2018 DA442_03890 a415e3867f6b170de669f53bd90f2aa5 314 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 1.4E-50 T 14-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 DA442_13775 861a6a78379fc40d76d7af6f52bc2afb 422 Gene3D G3DSA:3.30.70.270 6 157 2.3E-44 T 14-10-2018 DA442_13775 861a6a78379fc40d76d7af6f52bc2afb 422 Pfam PF00817 impB/mucB/samB family 7 152 4.9E-36 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DA442_13775 861a6a78379fc40d76d7af6f52bc2afb 422 Pfam PF11799 impB/mucB/samB family C-terminal domain 242 352 1.0E-16 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DA442_13775 861a6a78379fc40d76d7af6f52bc2afb 422 SUPERFAMILY SSF100879 245 349 6.47E-7 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DA442_13775 861a6a78379fc40d76d7af6f52bc2afb 422 Gene3D G3DSA:2.30.40.20 12 75 2.3E-44 T 14-10-2018 DA442_13775 861a6a78379fc40d76d7af6f52bc2afb 422 Gene3D G3DSA:1.10.150.20 174 231 5.4E-10 T 14-10-2018 DA442_13775 861a6a78379fc40d76d7af6f52bc2afb 422 Pfam PF11798 IMS family HHH motif 170 201 4.5E-6 T 14-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 DA442_13775 861a6a78379fc40d76d7af6f52bc2afb 422 Gene3D G3DSA:3.30.1490.100 245 354 1.2E-5 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DA442_13775 861a6a78379fc40d76d7af6f52bc2afb 422 SUPERFAMILY SSF56672 3 238 1.33E-72 T 14-10-2018 DA442_13775 861a6a78379fc40d76d7af6f52bc2afb 422 Pfam PF13438 Domain of unknown function (DUF4113) 372 421 2.2E-22 T 14-10-2018 IPR025188 Domain of unknown function DUF4113 DA442_15480 709410eb82141756a426db7353442171 259 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 26 247 1.6E-91 T 14-10-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 DA442_15480 709410eb82141756a426db7353442171 259 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 38 248 7.4E-87 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 DA442_15480 709410eb82141756a426db7353442171 259 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 14 248 39.442 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 DA442_15480 709410eb82141756a426db7353442171 259 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 53 224 6.5E-50 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 DA442_15480 709410eb82141756a426db7353442171 259 Gene3D G3DSA:3.40.50.620 8 221 1.1E-65 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DA442_15480 709410eb82141756a426db7353442171 259 PIRSF PIRSF000857 6 253 6.3E-56 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 DA442_15480 709410eb82141756a426db7353442171 259 SUPERFAMILY SSF52402 26 213 2.93E-56 T 14-10-2018 DA442_07525 4d7638e913410c5f67dcdbd5aecb275a 890 SUPERFAMILY SSF81923 18 125 1.79E-11 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 DA442_07525 4d7638e913410c5f67dcdbd5aecb275a 890 Gene3D G3DSA:3.40.50.300 359 571 9.5E-49 T 14-10-2018 DA442_07525 4d7638e913410c5f67dcdbd5aecb275a 890 SUPERFAMILY SSF52540 573 873 5.19E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_07525 4d7638e913410c5f67dcdbd5aecb275a 890 Pfam PF07724 AAA domain (Cdc48 subfamily) 624 788 1.1E-43 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DA442_07525 4d7638e913410c5f67dcdbd5aecb275a 890 Gene3D G3DSA:1.10.1780.10 1 160 1.6E-36 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 DA442_07525 4d7638e913410c5f67dcdbd5aecb275a 890 Gene3D G3DSA:3.40.50.300 577 792 1.3E-69 T 14-10-2018 DA442_07525 4d7638e913410c5f67dcdbd5aecb275a 890 SMART SM01086 795 885 4.4E-10 T 14-10-2018 IPR019489 Clp ATPase, C-terminal DA442_07525 4d7638e913410c5f67dcdbd5aecb275a 890 Gene3D G3DSA:1.10.8.60 795 888 7.0E-14 T 14-10-2018 DA442_07525 4d7638e913410c5f67dcdbd5aecb275a 890 Gene3D G3DSA:3.40.50.300 162 357 9.9E-63 T 14-10-2018 DA442_07525 4d7638e913410c5f67dcdbd5aecb275a 890 SUPERFAMILY SSF52540 175 505 1.53E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_07525 4d7638e913410c5f67dcdbd5aecb275a 890 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 795 870 3.4E-13 T 14-10-2018 IPR019489 Clp ATPase, C-terminal DA442_07525 4d7638e913410c5f67dcdbd5aecb275a 890 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 702 720 2.5E-33 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 DA442_07525 4d7638e913410c5f67dcdbd5aecb275a 890 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 628 646 2.5E-33 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 DA442_07525 4d7638e913410c5f67dcdbd5aecb275a 890 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 735 749 2.5E-33 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 DA442_07525 4d7638e913410c5f67dcdbd5aecb275a 890 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 673 691 2.5E-33 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 DA442_07525 4d7638e913410c5f67dcdbd5aecb275a 890 SMART SM00382 213 358 3.8E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_07525 4d7638e913410c5f67dcdbd5aecb275a 890 SMART SM00382 624 783 8.6E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_07525 4d7638e913410c5f67dcdbd5aecb275a 890 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 658 676 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 DA442_07525 4d7638e913410c5f67dcdbd5aecb275a 890 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 15 876 0.0 T 14-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 DA442_07525 4d7638e913410c5f67dcdbd5aecb275a 890 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 309 321 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 DA442_07525 4d7638e913410c5f67dcdbd5aecb275a 890 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 220 348 6.4E-10 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DA442_00075 a36ded7ebba6754b0a92000b8dfb4308 82 Hamap MF_00413 Sulfur carrier protein TusA [tusA]. 3 81 28.9 T 14-10-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 DA442_00075 a36ded7ebba6754b0a92000b8dfb4308 82 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 14-10-2018 IPR001455 TusA-like domain DA442_00075 a36ded7ebba6754b0a92000b8dfb4308 82 Gene3D G3DSA:3.30.110.40 5 80 1.5E-28 T 14-10-2018 IPR036868 TusA-like domain superfamily DA442_00075 a36ded7ebba6754b0a92000b8dfb4308 82 SUPERFAMILY SSF64307 9 80 6.02E-25 T 14-10-2018 IPR036868 TusA-like domain superfamily DA442_00075 a36ded7ebba6754b0a92000b8dfb4308 82 Pfam PF01206 Sulfurtransferase TusA 10 79 9.6E-23 T 14-10-2018 IPR001455 TusA-like domain DA442_05595 bf0dc7f955fb271fde52a851f4e5e71f 305 SUPERFAMILY SSF52113 212 266 1.94E-5 T 14-10-2018 IPR036420 BRCT domain superfamily DA442_05595 bf0dc7f955fb271fde52a851f4e5e71f 305 Gene3D G3DSA:3.40.50.10190 212 301 5.0E-12 T 14-10-2018 IPR036420 BRCT domain superfamily DA442_02045 8aee80809fa034e882d23bf4fbd9c729 66 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 5 55 7.0E-11 T 14-10-2018 IPR010260 DNA-binding transcriptional activator AlpA DA442_02045 8aee80809fa034e882d23bf4fbd9c729 66 SUPERFAMILY SSF46955 6 58 2.2E-6 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DA442_14040 41cc4911190d72caf2e4873376efebe3 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 6.3E-18 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DA442_14040 41cc4911190d72caf2e4873376efebe3 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 317 2.9E-22 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DA442_14040 41cc4911190d72caf2e4873376efebe3 327 Pfam PF00005 ABC transporter 26 181 8.5E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_14040 41cc4911190d72caf2e4873376efebe3 327 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_14040 41cc4911190d72caf2e4873376efebe3 327 Gene3D G3DSA:3.40.50.300 3 326 2.6E-90 T 14-10-2018 DA442_14040 41cc4911190d72caf2e4873376efebe3 327 SMART SM00382 34 231 1.4E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_14040 41cc4911190d72caf2e4873376efebe3 327 SUPERFAMILY SSF52540 5 252 1.15E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_19005 1294d4b959b803c1e6b2130959d687e5 791 Pfam PF00512 His Kinase A (phospho-acceptor) domain 570 635 2.1E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_19005 1294d4b959b803c1e6b2130959d687e5 791 PIRSF PIRSF037119 1 791 0.0 T 14-10-2018 IPR017116 Signal transduction histidine kinase, PgtB DA442_19005 1294d4b959b803c1e6b2130959d687e5 791 SMART SM00388 568 636 3.1E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_19005 1294d4b959b803c1e6b2130959d687e5 791 SUPERFAMILY SSF55874 635 788 2.88E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_19005 1294d4b959b803c1e6b2130959d687e5 791 SMART SM00387 679 791 1.8E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_19005 1294d4b959b803c1e6b2130959d687e5 791 SMART SM00304 350 402 0.0065 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_19005 1294d4b959b803c1e6b2130959d687e5 791 PRINTS PR00344 Bacterial sensor protein C-terminal signature 751 769 5.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_19005 1294d4b959b803c1e6b2130959d687e5 791 PRINTS PR00344 Bacterial sensor protein C-terminal signature 740 750 5.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_19005 1294d4b959b803c1e6b2130959d687e5 791 PRINTS PR00344 Bacterial sensor protein C-terminal signature 722 736 5.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_19005 1294d4b959b803c1e6b2130959d687e5 791 PRINTS PR00344 Bacterial sensor protein C-terminal signature 775 788 5.3E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_19005 1294d4b959b803c1e6b2130959d687e5 791 SUPERFAMILY SSF47384 564 636 3.53E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DA442_19005 1294d4b959b803c1e6b2130959d687e5 791 Gene3D G3DSA:3.30.565.10 636 791 5.3E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_19005 1294d4b959b803c1e6b2130959d687e5 791 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 680 790 2.0E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_19005 1294d4b959b803c1e6b2130959d687e5 791 Gene3D G3DSA:1.10.287.130 544 631 1.9E-19 T 14-10-2018 DA442_11020 a21e135dd576e3f639aafe7722d1be72 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 2.1E-13 T 14-10-2018 DA442_11020 a21e135dd576e3f639aafe7722d1be72 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 2.1E-13 T 14-10-2018 DA442_11020 a21e135dd576e3f639aafe7722d1be72 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 2.1E-13 T 14-10-2018 DA442_11020 a21e135dd576e3f639aafe7722d1be72 196 Pfam PF00117 Glutamine amidotransferase class-I 6 186 4.7E-47 T 14-10-2018 IPR017926 Glutamine amidotransferase DA442_11020 a21e135dd576e3f639aafe7722d1be72 196 PRINTS PR00097 Anthranilate synthase component II signature 4 18 1.9E-34 T 14-10-2018 DA442_11020 a21e135dd576e3f639aafe7722d1be72 196 PRINTS PR00097 Anthranilate synthase component II signature 79 90 1.9E-34 T 14-10-2018 DA442_11020 a21e135dd576e3f639aafe7722d1be72 196 PRINTS PR00097 Anthranilate synthase component II signature 166 179 1.9E-34 T 14-10-2018 DA442_11020 a21e135dd576e3f639aafe7722d1be72 196 PRINTS PR00097 Anthranilate synthase component II signature 124 136 1.9E-34 T 14-10-2018 DA442_11020 a21e135dd576e3f639aafe7722d1be72 196 PRINTS PR00097 Anthranilate synthase component II signature 104 112 1.9E-34 T 14-10-2018 DA442_11020 a21e135dd576e3f639aafe7722d1be72 196 PRINTS PR00097 Anthranilate synthase component II signature 52 61 1.9E-34 T 14-10-2018 DA442_11020 a21e135dd576e3f639aafe7722d1be72 196 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 188 6.1E-55 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DA442_11020 a21e135dd576e3f639aafe7722d1be72 196 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 1.2E-5 T 14-10-2018 DA442_11020 a21e135dd576e3f639aafe7722d1be72 196 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 1.2E-5 T 14-10-2018 DA442_11020 a21e135dd576e3f639aafe7722d1be72 196 Gene3D G3DSA:3.40.50.880 1 193 1.1E-58 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DA442_11020 a21e135dd576e3f639aafe7722d1be72 196 SUPERFAMILY SSF52317 3 192 1.6E-47 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DA442_22400 d56f96d05e255558b736a5556ff3595e 326 Gene3D G3DSA:3.30.70.100 1 96 5.6E-33 T 14-10-2018 DA442_22400 d56f96d05e255558b736a5556ff3595e 326 Gene3D G3DSA:3.40.250.10 97 253 8.1E-52 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily DA442_22400 d56f96d05e255558b736a5556ff3595e 326 Hamap MF_00469 UPF0176 protein YceA [yceA]. 2 254 45.368 T 14-10-2018 IPR020936 Uncharacterised protein family UPF0176 DA442_22400 d56f96d05e255558b736a5556ff3595e 326 SUPERFAMILY SSF52821 94 240 3.98E-32 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily DA442_22400 d56f96d05e255558b736a5556ff3595e 326 SMART SM00450 113 214 2.8E-22 T 14-10-2018 IPR001763 Rhodanese-like domain DA442_22400 d56f96d05e255558b736a5556ff3595e 326 Pfam PF00581 Rhodanese-like domain 117 210 1.9E-8 T 14-10-2018 IPR001763 Rhodanese-like domain DA442_13405 162e9f2a6ccdf641af9ff44a56cecb20 406 Gene3D G3DSA:3.40.720.10 3 406 3.2E-149 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DA442_13405 162e9f2a6ccdf641af9ff44a56cecb20 406 Hamap MF_00740 Phosphopentomutase [deoB]. 1 406 53.81 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 DA442_13405 162e9f2a6ccdf641af9ff44a56cecb20 406 Pfam PF01676 Metalloenzyme superfamily 2 397 6.3E-42 T 14-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 DA442_13405 162e9f2a6ccdf641af9ff44a56cecb20 406 SUPERFAMILY SSF143856 118 234 9.02E-48 T 14-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 DA442_13405 162e9f2a6ccdf641af9ff44a56cecb20 406 PIRSF PIRSF001491 1 406 3.8E-160 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 DA442_13405 162e9f2a6ccdf641af9ff44a56cecb20 406 SUPERFAMILY SSF53649 1 406 1.23E-68 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DA442_13405 162e9f2a6ccdf641af9ff44a56cecb20 406 Gene3D G3DSA:3.30.70.1250 116 237 3.2E-149 T 14-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 DA442_13405 162e9f2a6ccdf641af9ff44a56cecb20 406 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 403 2.3E-176 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 DA442_25760 06be14a81d7cedcca0b5c2e54c0e4a96 133 SUPERFAMILY SSF51316 3 132 1.57E-32 T 14-10-2018 IPR011057 Mss4-like superfamily DA442_25760 06be14a81d7cedcca0b5c2e54c0e4a96 133 Gene3D G3DSA:2.170.150.70 7 122 1.7E-11 T 14-10-2018 DA442_25760 06be14a81d7cedcca0b5c2e54c0e4a96 133 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 28 117 1.3E-20 T 14-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 DA442_03710 51363ff43e561d81f80806e0335ef16f 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 5.5E-39 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS DA442_03710 51363ff43e561d81f80806e0335ef16f 105 SUPERFAMILY SSF81301 5 105 3.6E-38 T 14-10-2018 DA442_03710 51363ff43e561d81f80806e0335ef16f 105 Gene3D G3DSA:3.30.460.10 2 105 2.4E-37 T 14-10-2018 DA442_03710 51363ff43e561d81f80806e0335ef16f 105 Pfam PF02410 Ribosomal silencing factor during starvation 11 104 3.7E-28 T 14-10-2018 DA442_03710 51363ff43e561d81f80806e0335ef16f 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 2 105 25.401 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS DA442_02500 8f3d5553b408834548955b0135870adc 783 SMART SM00091 155 221 9.2E-8 T 14-10-2018 IPR000014 PAS domain DA442_02500 8f3d5553b408834548955b0135870adc 783 SMART SM00073 673 779 5.7E-10 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 DA442_02500 8f3d5553b408834548955b0135870adc 783 Gene3D G3DSA:3.30.450.20 151 267 3.1E-22 T 14-10-2018 DA442_02500 8f3d5553b408834548955b0135870adc 783 SUPERFAMILY SSF55785 140 267 3.14E-25 T 14-10-2018 IPR035965 PAS domain superfamily DA442_02500 8f3d5553b408834548955b0135870adc 783 SMART SM00448 527 638 2.5E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_02500 8f3d5553b408834548955b0135870adc 783 SUPERFAMILY SSF47226 667 781 2.88E-29 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 DA442_02500 8f3d5553b408834548955b0135870adc 783 SUPERFAMILY SSF47384 270 347 2.94E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DA442_02500 8f3d5553b408834548955b0135870adc 783 Gene3D G3DSA:1.10.287.970 1 89 4.2E-38 T 14-10-2018 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily DA442_02500 8f3d5553b408834548955b0135870adc 783 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 507 6.5E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_02500 8f3d5553b408834548955b0135870adc 783 Gene3D G3DSA:1.20.120.160 667 783 7.3E-28 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 DA442_02500 8f3d5553b408834548955b0135870adc 783 Gene3D G3DSA:3.40.50.2300 523 646 3.6E-27 T 14-10-2018 DA442_02500 8f3d5553b408834548955b0135870adc 783 PIRSF PIRSF003182 1 783 0.0 T 14-10-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 DA442_02500 8f3d5553b408834548955b0135870adc 783 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 345 2.0E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_02500 8f3d5553b408834548955b0135870adc 783 Pfam PF00072 Response regulator receiver domain 529 638 2.8E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_02500 8f3d5553b408834548955b0135870adc 783 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 507 9.8E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_02500 8f3d5553b408834548955b0135870adc 783 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 462 9.8E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_02500 8f3d5553b408834548955b0135870adc 783 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 488 9.8E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_02500 8f3d5553b408834548955b0135870adc 783 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 448 9.8E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_02500 8f3d5553b408834548955b0135870adc 783 Gene3D G3DSA:3.30.565.10 348 512 2.3E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_02500 8f3d5553b408834548955b0135870adc 783 Pfam PF01627 Hpt domain 694 765 6.4E-12 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 DA442_02500 8f3d5553b408834548955b0135870adc 783 SMART SM00387 394 510 1.3E-32 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_02500 8f3d5553b408834548955b0135870adc 783 Pfam PF08448 PAS fold 162 271 6.9E-19 T 14-10-2018 IPR013656 PAS fold-4 DA442_02500 8f3d5553b408834548955b0135870adc 783 Gene3D G3DSA:1.10.287.130 268 345 9.9E-22 T 14-10-2018 DA442_02500 8f3d5553b408834548955b0135870adc 783 SMART SM00388 282 347 2.7E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_02500 8f3d5553b408834548955b0135870adc 783 SUPERFAMILY SSF52172 527 642 3.13E-25 T 14-10-2018 IPR011006 CheY-like superfamily DA442_02500 8f3d5553b408834548955b0135870adc 783 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 276 6.5E-18 T 14-10-2018 IPR000014 PAS domain DA442_02500 8f3d5553b408834548955b0135870adc 783 SUPERFAMILY SSF55874 336 506 3.54E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_23705 c4f21b509d9f94bd132a9445afd05548 141 Gene3D G3DSA:3.10.180.10 5 138 1.4E-22 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DA442_23705 c4f21b509d9f94bd132a9445afd05548 141 SUPERFAMILY SSF54593 9 134 6.88E-22 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DA442_23705 c4f21b509d9f94bd132a9445afd05548 141 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 134 4.5E-8 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DA442_04010 0c0926c5de091201ba9862b14bd0f1c2 474 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DA442_04010 0c0926c5de091201ba9862b14bd0f1c2 474 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 308 1.0E-116 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 DA442_04010 0c0926c5de091201ba9862b14bd0f1c2 474 Gene3D G3DSA:1.10.10.350 369 472 1.2E-24 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DA442_04010 0c0926c5de091201ba9862b14bd0f1c2 474 Gene3D G3DSA:3.40.50.620 2 317 1.8E-135 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DA442_04010 0c0926c5de091201ba9862b14bd0f1c2 474 SUPERFAMILY SSF48163 302 464 1.19E-47 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DA442_04010 0c0926c5de091201ba9862b14bd0f1c2 474 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 468 2.5E-198 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DA442_04010 0c0926c5de091201ba9862b14bd0f1c2 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 192 1.4E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DA442_04010 0c0926c5de091201ba9862b14bd0f1c2 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 1.4E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DA442_04010 0c0926c5de091201ba9862b14bd0f1c2 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 1.4E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DA442_04010 0c0926c5de091201ba9862b14bd0f1c2 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 1.4E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DA442_04010 0c0926c5de091201ba9862b14bd0f1c2 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 198 206 1.4E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DA442_04010 0c0926c5de091201ba9862b14bd0f1c2 474 SUPERFAMILY SSF52374 3 301 2.44E-110 T 14-10-2018 DA442_04010 0c0926c5de091201ba9862b14bd0f1c2 474 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 464 32.291 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DA442_14745 9a666ecc5859e54f2d0231c677c41ebf 243 SUPERFAMILY SSF88697 2 70 8.95E-18 T 14-10-2018 IPR015947 PUA-like superfamily DA442_14745 9a666ecc5859e54f2d0231c677c41ebf 243 Gene3D G3DSA:2.40.240.20 1 71 1.8E-22 T 14-10-2018 DA442_14745 9a666ecc5859e54f2d0231c677c41ebf 243 Gene3D G3DSA:3.40.1280.10 74 243 2.9E-66 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DA442_14745 9a666ecc5859e54f2d0231c677c41ebf 243 Pfam PF04452 RNA methyltransferase 19 236 8.7E-76 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 DA442_14745 9a666ecc5859e54f2d0231c677c41ebf 243 SUPERFAMILY SSF75217 75 242 3.79E-53 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases DA442_14745 9a666ecc5859e54f2d0231c677c41ebf 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 1.1E-85 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 DA442_14745 9a666ecc5859e54f2d0231c677c41ebf 243 PIRSF PIRSF015601 2 242 4.7E-57 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 DA442_05825 bdd61b49b2eec451e7dff55d5ef28f57 135 PIRSF PIRSF002096 1 135 2.3E-55 T 14-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 DA442_05825 bdd61b49b2eec451e7dff55d5ef28f57 135 Pfam PF00816 H-NS histone family 32 129 7.5E-20 T 14-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 DA442_05825 bdd61b49b2eec451e7dff55d5ef28f57 135 Gene3D G3DSA:1.10.287.1050 1 95 1.4E-29 T 14-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 DA442_05825 bdd61b49b2eec451e7dff55d5ef28f57 135 SMART SM00528 88 135 6.4E-26 T 14-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 DA442_05825 bdd61b49b2eec451e7dff55d5ef28f57 135 SUPERFAMILY SSF81273 93 135 2.12E-12 T 14-10-2018 DA442_05825 bdd61b49b2eec451e7dff55d5ef28f57 135 Gene3D G3DSA:4.10.430.10 96 135 9.8E-26 T 14-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 DA442_05825 bdd61b49b2eec451e7dff55d5ef28f57 135 SUPERFAMILY SSF81273 2 58 1.0E-16 T 14-10-2018 DA442_00195 caf78b231f249f54d5a0e1a69d983eed 671 Gene3D G3DSA:1.10.486.10 377 546 4.9E-124 T 14-10-2018 DA442_00195 caf78b231f249f54d5a0e1a69d983eed 671 Gene3D G3DSA:3.40.50.300 4 266 1.8E-100 T 14-10-2018 DA442_00195 caf78b231f249f54d5a0e1a69d983eed 671 Gene3D G3DSA:1.10.10.160 108 181 1.8E-100 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily DA442_00195 caf78b231f249f54d5a0e1a69d983eed 671 SUPERFAMILY SSF52540 1 640 3.87E-163 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_00195 caf78b231f249f54d5a0e1a69d983eed 671 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 669 0.0 T 14-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 DA442_00195 caf78b231f249f54d5a0e1a69d983eed 671 Gene3D G3DSA:3.40.50.300 274 634 4.9E-124 T 14-10-2018 DA442_00195 caf78b231f249f54d5a0e1a69d983eed 671 Pfam PF13361 UvrD-like helicase C-terminal domain 271 615 1.6E-73 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 DA442_00195 caf78b231f249f54d5a0e1a69d983eed 671 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 670 40.912 T 14-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 DA442_00195 caf78b231f249f54d5a0e1a69d983eed 671 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 8.8E-78 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 DA442_15985 ece949a7466773d6cf19313cea09add0 154 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 139 2.8E-53 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 DA442_15985 ece949a7466773d6cf19313cea09add0 154 SUPERFAMILY SSF52540 27 151 5.8E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_15985 ece949a7466773d6cf19313cea09add0 154 Gene3D G3DSA:3.40.50.300 2 153 6.5E-50 T 14-10-2018 DA442_15985 ece949a7466773d6cf19313cea09add0 154 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 133 9.7E-44 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 DA442_21085 6a7d945071446d61f98343ba61aa16d5 478 SUPERFAMILY SSF46785 20 87 2.45E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_21085 6a7d945071446d61f98343ba61aa16d5 478 Pfam PF00155 Aminotransferase class I and II 143 439 4.0E-22 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DA442_21085 6a7d945071446d61f98343ba61aa16d5 478 Gene3D G3DSA:3.40.640.10 109 471 2.9E-101 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_21085 6a7d945071446d61f98343ba61aa16d5 478 Gene3D G3DSA:1.10.10.10 20 87 5.1E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_21085 6a7d945071446d61f98343ba61aa16d5 478 SUPERFAMILY SSF53383 116 476 2.51E-75 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_21085 6a7d945071446d61f98343ba61aa16d5 478 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 60 76 5.9E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_21085 6a7d945071446d61f98343ba61aa16d5 478 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 60 5.9E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_21085 6a7d945071446d61f98343ba61aa16d5 478 Pfam PF00392 Bacterial regulatory proteins, gntR family 25 86 3.8E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_21085 6a7d945071446d61f98343ba61aa16d5 478 SMART SM00345 27 86 3.6E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_14715 1d286fc8d86f8237684354095464d4cf 664 Pfam PF02780 Transketolase, C-terminal domain 541 655 1.2E-21 T 14-10-2018 IPR033248 Transketolase, C-terminal domain DA442_14715 1d286fc8d86f8237684354095464d4cf 664 SUPERFAMILY SSF52922 533 664 2.49E-45 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DA442_14715 1d286fc8d86f8237684354095464d4cf 664 Gene3D G3DSA:3.40.50.920 538 664 6.5E-47 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DA442_14715 1d286fc8d86f8237684354095464d4cf 664 SMART SM00861 354 525 1.0E-66 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DA442_14715 1d286fc8d86f8237684354095464d4cf 664 SUPERFAMILY SSF52518 333 526 6.8E-68 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DA442_14715 1d286fc8d86f8237684354095464d4cf 664 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 333 7.9E-166 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DA442_14715 1d286fc8d86f8237684354095464d4cf 664 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 663 0.0 T 14-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 DA442_14715 1d286fc8d86f8237684354095464d4cf 664 Gene3D G3DSA:3.40.50.970 326 537 7.3E-85 T 14-10-2018 DA442_14715 1d286fc8d86f8237684354095464d4cf 664 Gene3D G3DSA:3.40.50.970 1 325 2.2E-129 T 14-10-2018 DA442_14715 1d286fc8d86f8237684354095464d4cf 664 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 9.6E-48 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DA442_14715 1d286fc8d86f8237684354095464d4cf 664 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DA442_14715 1d286fc8d86f8237684354095464d4cf 664 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DA442_14715 1d286fc8d86f8237684354095464d4cf 664 SUPERFAMILY SSF52518 6 319 2.06E-118 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DA442_11540 9270af88d9aba8c6fa0acf0f154debf0 315 SUPERFAMILY SSF55174 19 71 3.79E-9 T 14-10-2018 DA442_11540 9270af88d9aba8c6fa0acf0f154debf0 315 Pfam PF00849 RNA pseudouridylate synthase 102 247 5.5E-31 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_11540 9270af88d9aba8c6fa0acf0f154debf0 315 SUPERFAMILY SSF55120 91 307 1.01E-63 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_11540 9270af88d9aba8c6fa0acf0f154debf0 315 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 311 8.6E-93 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_11540 9270af88d9aba8c6fa0acf0f154debf0 315 Gene3D G3DSA:3.10.290.10 7 76 3.2E-17 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DA442_11540 9270af88d9aba8c6fa0acf0f154debf0 315 Pfam PF01479 S4 domain 20 66 2.9E-10 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_11540 9270af88d9aba8c6fa0acf0f154debf0 315 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 141 155 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_11540 9270af88d9aba8c6fa0acf0f154debf0 315 SMART SM00363 20 77 1.6E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_11540 9270af88d9aba8c6fa0acf0f154debf0 315 Gene3D G3DSA:3.30.2350.10 93 315 1.2E-78 T 14-10-2018 DA442_17910 3baad45c4dade254c0311d05293c2fd4 668 Pfam PF00773 RNB domain 193 521 3.6E-85 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 DA442_17910 3baad45c4dade254c0311d05293c2fd4 668 SUPERFAMILY SSF50249 8 80 1.94E-13 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_17910 3baad45c4dade254c0311d05293c2fd4 668 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 650 42.294 T 14-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 DA442_17910 3baad45c4dade254c0311d05293c2fd4 668 SMART SM00357 23 79 7.4E-8 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 DA442_17910 3baad45c4dade254c0311d05293c2fd4 668 SUPERFAMILY SSF50249 83 173 1.88E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_17910 3baad45c4dade254c0311d05293c2fd4 668 SMART SM00955 193 523 9.9E-114 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 DA442_17910 3baad45c4dade254c0311d05293c2fd4 668 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 649 0.0 T 14-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 DA442_17910 3baad45c4dade254c0311d05293c2fd4 668 Pfam PF00575 S1 RNA binding domain 565 645 1.8E-8 T 14-10-2018 IPR003029 S1 domain GO:0003676 DA442_17910 3baad45c4dade254c0311d05293c2fd4 668 ProSitePatterns PS01175 Ribonuclease II family signature. 490 514 - T 14-10-2018 IPR022966 Ribonuclease II/R, conserved site DA442_17910 3baad45c4dade254c0311d05293c2fd4 668 Gene3D G3DSA:2.40.50.640 83 157 6.4E-31 T 14-10-2018 DA442_17910 3baad45c4dade254c0311d05293c2fd4 668 SUPERFAMILY SSF50249 568 649 1.05E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_17910 3baad45c4dade254c0311d05293c2fd4 668 Pfam PF08206 Ribonuclease B OB domain 24 80 5.8E-16 T 14-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain DA442_17910 3baad45c4dade254c0311d05293c2fd4 668 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 648 2.4E-181 T 14-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 DA442_17910 3baad45c4dade254c0311d05293c2fd4 668 SUPERFAMILY SSF50249 186 563 5.14E-108 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_17910 3baad45c4dade254c0311d05293c2fd4 668 Gene3D G3DSA:2.40.50.140 565 651 1.1E-32 T 14-10-2018 DA442_17910 3baad45c4dade254c0311d05293c2fd4 668 Gene3D G3DSA:2.40.50.140 1 82 3.6E-26 T 14-10-2018 DA442_03195 dbe0cc70966cb4c382f1f648b4103c55 488 SUPERFAMILY SSF54631 94 203 1.77E-26 T 14-10-2018 DA442_03195 dbe0cc70966cb4c382f1f648b4103c55 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 2.8E-162 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 DA442_03195 dbe0cc70966cb4c382f1f648b4103c55 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 DA442_03195 dbe0cc70966cb4c382f1f648b4103c55 488 SMART SM00116 158 206 5.6E-6 T 14-10-2018 IPR000644 CBS domain DA442_03195 dbe0cc70966cb4c382f1f648b4103c55 488 SMART SM00116 96 144 1.3E-12 T 14-10-2018 IPR000644 CBS domain DA442_03195 dbe0cc70966cb4c382f1f648b4103c55 488 Gene3D G3DSA:3.20.20.70 1 486 5.5E-212 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_03195 dbe0cc70966cb4c382f1f648b4103c55 488 Pfam PF00571 CBS domain 149 201 8.6E-5 T 14-10-2018 IPR000644 CBS domain DA442_03195 dbe0cc70966cb4c382f1f648b4103c55 488 Pfam PF00571 CBS domain 95 140 4.5E-10 T 14-10-2018 IPR000644 CBS domain DA442_03195 dbe0cc70966cb4c382f1f648b4103c55 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 85.218 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 DA442_03195 dbe0cc70966cb4c382f1f648b4103c55 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 3.8E-197 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 DA442_03195 dbe0cc70966cb4c382f1f648b4103c55 488 PIRSF PIRSF000130 1 488 1.4E-201 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 DA442_03195 dbe0cc70966cb4c382f1f648b4103c55 488 SUPERFAMILY SSF51412 1 477 7.85E-126 T 14-10-2018 DA442_03195 dbe0cc70966cb4c382f1f648b4103c55 488 SMART SM01240 7 473 0.0 T 14-10-2018 DA442_12805 0a72eff7f25236de1b92d187bb787f37 292 Gene3D G3DSA:3.90.230.10 1 290 7.8E-104 T 14-10-2018 DA442_12805 0a72eff7f25236de1b92d187bb787f37 292 Hamap MF_01974 Methionine aminopeptidase [map]. 3 280 40.656 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 DA442_12805 0a72eff7f25236de1b92d187bb787f37 292 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 279 3.3E-83 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 DA442_12805 0a72eff7f25236de1b92d187bb787f37 292 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 197 215 - T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 DA442_12805 0a72eff7f25236de1b92d187bb787f37 292 Pfam PF00557 Metallopeptidase family M24 12 271 2.4E-45 T 14-10-2018 IPR000994 Peptidase M24 DA442_12805 0a72eff7f25236de1b92d187bb787f37 292 SUPERFAMILY SSF55920 3 282 1.7E-81 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like DA442_23065 83eb47504c7ac83d473c73177ac6197d 270 SUPERFAMILY SSF46689 220 268 9.41E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_23065 83eb47504c7ac83d473c73177ac6197d 270 Gene3D G3DSA:1.10.10.60 217 269 3.3E-15 T 14-10-2018 DA442_23065 83eb47504c7ac83d473c73177ac6197d 270 Gene3D G3DSA:1.10.10.60 169 216 1.6E-10 T 14-10-2018 DA442_23065 83eb47504c7ac83d473c73177ac6197d 270 Pfam PF12833 Helix-turn-helix domain 189 267 7.8E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_23065 83eb47504c7ac83d473c73177ac6197d 270 SUPERFAMILY SSF46689 170 216 1.16E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_23065 83eb47504c7ac83d473c73177ac6197d 270 SMART SM00342 183 266 5.8E-29 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_23065 83eb47504c7ac83d473c73177ac6197d 270 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 235 250 3.5E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DA442_23065 83eb47504c7ac83d473c73177ac6197d 270 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 250 266 3.5E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DA442_03735 d79d0bc32f1fe0d968b32dc5ea68f256 505 Gene3D G3DSA:3.60.110.10 209 481 7.1E-15 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DA442_03735 d79d0bc32f1fe0d968b32dc5ea68f256 505 SUPERFAMILY SSF56317 213 486 5.89E-41 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DA442_03735 d79d0bc32f1fe0d968b32dc5ea68f256 505 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 61 453 8.8E-99 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 DA442_03735 d79d0bc32f1fe0d968b32dc5ea68f256 505 Pfam PF00795 Carbon-nitrogen hydrolase 221 470 5.6E-37 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 DA442_03735 d79d0bc32f1fe0d968b32dc5ea68f256 505 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 8 490 23.593 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 DA442_01960 92b21dd3c3e392e112beecf144b4b7e8 382 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 151 374 1.7E-58 T 14-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 DA442_01960 92b21dd3c3e392e112beecf144b4b7e8 382 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 3 124 1.5E-23 T 14-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 DA442_01960 92b21dd3c3e392e112beecf144b4b7e8 382 Gene3D G3DSA:1.10.1040.10 208 382 7.0E-65 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DA442_01960 92b21dd3c3e392e112beecf144b4b7e8 382 SUPERFAMILY SSF51735 3 203 4.14E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_01960 92b21dd3c3e392e112beecf144b4b7e8 382 SUPERFAMILY SSF48179 205 382 7.14E-46 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DA442_01960 92b21dd3c3e392e112beecf144b4b7e8 382 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 151 163 - T 14-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DA442_01960 92b21dd3c3e392e112beecf144b4b7e8 382 Gene3D G3DSA:3.40.50.720 2 206 1.8E-78 T 14-10-2018 DA442_01960 92b21dd3c3e392e112beecf144b4b7e8 382 PRINTS PR00084 Mannitol dehydrogenase signature 115 128 7.7E-18 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DA442_01960 92b21dd3c3e392e112beecf144b4b7e8 382 PRINTS PR00084 Mannitol dehydrogenase signature 151 164 7.7E-18 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DA442_01960 92b21dd3c3e392e112beecf144b4b7e8 382 PRINTS PR00084 Mannitol dehydrogenase signature 4 14 7.7E-18 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DA442_01960 92b21dd3c3e392e112beecf144b4b7e8 382 PRINTS PR00084 Mannitol dehydrogenase signature 171 186 7.7E-18 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DA442_01960 92b21dd3c3e392e112beecf144b4b7e8 382 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 2 379 41.023 T 14-10-2018 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DA442_11625 98d028cd052164c8b76208b1cf377ff0 322 SUPERFAMILY SSF51395 1 313 1.17E-72 T 14-10-2018 DA442_11625 98d028cd052164c8b76208b1cf377ff0 322 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 52.666 T 14-10-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 DA442_11625 98d028cd052164c8b76208b1cf377ff0 322 Gene3D G3DSA:1.20.225.30 243 314 8.1E-25 T 14-10-2018 DA442_11625 98d028cd052164c8b76208b1cf377ff0 322 PIRSF PIRSF006621 1 322 4.4E-75 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 DA442_11625 98d028cd052164c8b76208b1cf377ff0 322 Gene3D G3DSA:3.20.20.70 1 242 4.4E-80 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_11625 98d028cd052164c8b76208b1cf377ff0 322 Pfam PF01207 Dihydrouridine synthase (Dus) 5 295 1.2E-77 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 DA442_11625 98d028cd052164c8b76208b1cf377ff0 322 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 DA442_05995 704ccebd0d54e539136bc56ece1a3575 260 SUPERFAMILY SSF52540 3 252 1.11E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_05995 704ccebd0d54e539136bc56ece1a3575 260 SMART SM00382 38 227 5.5E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_05995 704ccebd0d54e539136bc56ece1a3575 260 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_05995 704ccebd0d54e539136bc56ece1a3575 260 Gene3D G3DSA:3.40.50.300 1 259 4.1E-69 T 14-10-2018 DA442_05995 704ccebd0d54e539136bc56ece1a3575 260 Pfam PF00005 ABC transporter 30 178 4.6E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_06230 61f0f2ee3a8c6b28660d66ca176a998b 583 SMART SM00490 265 344 1.1E-10 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_06230 61f0f2ee3a8c6b28660d66ca176a998b 583 SUPERFAMILY SSF52540 48 360 3.53E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_06230 61f0f2ee3a8c6b28660d66ca176a998b 583 Pfam PF04851 Type III restriction enzyme, res subunit 2 154 8.2E-24 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 DA442_06230 61f0f2ee3a8c6b28660d66ca176a998b 583 Gene3D G3DSA:3.40.50.300 209 367 1.3E-33 T 14-10-2018 DA442_06230 61f0f2ee3a8c6b28660d66ca176a998b 583 Pfam PF00271 Helicase conserved C-terminal domain 239 342 8.2E-14 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_06230 61f0f2ee3a8c6b28660d66ca176a998b 583 Gene3D G3DSA:3.40.50.300 1 168 1.4E-29 T 14-10-2018 DA442_06230 61f0f2ee3a8c6b28660d66ca176a998b 583 SUPERFAMILY SSF57829 425 465 2.75E-6 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 DA442_06230 61f0f2ee3a8c6b28660d66ca176a998b 583 SMART SM00487 1 177 1.6E-14 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DA442_18230 6891efce8bdfa1d4efb64455cfb2672a 717 Pfam PF12805 FUSC-like inner membrane protein yccS 68 348 7.7E-114 T 14-10-2018 IPR032692 Integral membrane protein YccS, N-terminal DA442_18230 6891efce8bdfa1d4efb64455cfb2672a 717 Pfam PF13515 Fusaric acid resistance protein-like 405 524 1.2E-22 T 14-10-2018 DA442_18230 6891efce8bdfa1d4efb64455cfb2672a 717 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 10 711 1.7E-243 T 14-10-2018 IPR010020 Integral membrane protein, YccS/YhfK DA442_18230 6891efce8bdfa1d4efb64455cfb2672a 717 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 10 712 0.0 T 14-10-2018 IPR010019 Integral membrane protein, YccS DA442_15100 bc48cebb66062b31e65e1383449dbe2f 241 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 3.4E-44 T 14-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 DA442_15100 bc48cebb66062b31e65e1383449dbe2f 241 SUPERFAMILY SSF69593 4 235 7.32E-57 T 14-10-2018 DA442_15100 bc48cebb66062b31e65e1383449dbe2f 241 SMART SM00563 67 182 6.6E-40 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DA442_15100 bc48cebb66062b31e65e1383449dbe2f 241 Pfam PF01553 Acyltransferase 58 180 6.7E-32 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DA442_10860 cb7fbd98d09f6258c7aec6423e34fc9a 475 Gene3D G3DSA:1.10.1130.10 40 469 1.3E-186 T 14-10-2018 DA442_10860 cb7fbd98d09f6258c7aec6423e34fc9a 475 Hamap MF_01182 Cytochrome c-552 [nrfA]. 3 475 58.173 T 14-10-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 DA442_10860 cb7fbd98d09f6258c7aec6423e34fc9a 475 PIRSF PIRSF000243 24 474 6.2E-124 T 14-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 DA442_10860 cb7fbd98d09f6258c7aec6423e34fc9a 475 TIGRFAM TIGR03152 cyto_c552_HCOOH: formate-dependent cytochrome c nitrite reductase, c552 subunit 37 473 3.6E-246 T 14-10-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 DA442_10860 cb7fbd98d09f6258c7aec6423e34fc9a 475 Gene3D G3DSA:1.20.140.10 309 451 1.3E-186 T 14-10-2018 DA442_10860 cb7fbd98d09f6258c7aec6423e34fc9a 475 SUPERFAMILY SSF48695 36 470 1.49E-163 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily DA442_10860 cb7fbd98d09f6258c7aec6423e34fc9a 475 Pfam PF02335 Cytochrome c552 41 470 3.1E-179 T 14-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 DA442_25170 2a0de8d798775a04dcddf5425103b9aa 303 Gene3D G3DSA:3.40.190.10 166 272 3.1E-9 T 14-10-2018 DA442_25170 2a0de8d798775a04dcddf5425103b9aa 303 Gene3D G3DSA:3.40.190.10 94 283 3.1E-9 T 14-10-2018 DA442_25170 2a0de8d798775a04dcddf5425103b9aa 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 17 28 1.2E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_25170 2a0de8d798775a04dcddf5425103b9aa 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 38 1.2E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_25170 2a0de8d798775a04dcddf5425103b9aa 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 49 1.2E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_25170 2a0de8d798775a04dcddf5425103b9aa 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 6.9E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_25170 2a0de8d798775a04dcddf5425103b9aa 303 SUPERFAMILY SSF46785 5 109 2.11E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_25170 2a0de8d798775a04dcddf5425103b9aa 303 SUPERFAMILY SSF53850 90 284 1.34E-17 T 14-10-2018 DA442_25170 2a0de8d798775a04dcddf5425103b9aa 303 Pfam PF03466 LysR substrate binding domain 89 293 4.0E-7 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_25170 2a0de8d798775a04dcddf5425103b9aa 303 Gene3D G3DSA:1.10.10.10 3 87 1.8E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_10875 029804ee937cdcd23f0c05fc711f4a69 878 Gene3D G3DSA:2.120.10.90 534 840 1.0E-126 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DA442_10875 029804ee937cdcd23f0c05fc711f4a69 878 Gene3D G3DSA:3.30.1360.40 236 332 1.3E-237 T 14-10-2018 DA442_10875 029804ee937cdcd23f0c05fc711f4a69 878 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 5.1E-159 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DA442_10875 029804ee937cdcd23f0c05fc711f4a69 878 Gene3D G3DSA:3.90.199.10 33 520 1.3E-237 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 DA442_10875 029804ee937cdcd23f0c05fc711f4a69 878 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 840 24.644 T 14-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DA442_10875 029804ee937cdcd23f0c05fc711f4a69 878 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 838 0.0 T 14-10-2018 DA442_10875 029804ee937cdcd23f0c05fc711f4a69 878 SUPERFAMILY SSF56719 30 520 2.75E-188 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DA442_10875 029804ee937cdcd23f0c05fc711f4a69 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 742 788 1.2E-12 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DA442_10875 029804ee937cdcd23f0c05fc711f4a69 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 792 838 2.7E-12 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DA442_10875 029804ee937cdcd23f0c05fc711f4a69 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 736 8.5E-16 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DA442_10875 029804ee937cdcd23f0c05fc711f4a69 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 637 6.4E-11 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DA442_10875 029804ee937cdcd23f0c05fc711f4a69 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 687 3.2E-8 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DA442_10875 029804ee937cdcd23f0c05fc711f4a69 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 583 6.5E-7 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DA442_10875 029804ee937cdcd23f0c05fc711f4a69 878 Gene3D G3DSA:1.10.268.10 369 492 1.3E-237 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DA442_10875 029804ee937cdcd23f0c05fc711f4a69 878 SMART SM00434 11 498 0.0 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DA442_10875 029804ee937cdcd23f0c05fc711f4a69 878 SUPERFAMILY SSF101904 532 851 5.89E-114 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DA442_09165 55244164acb0391dc87a6895c5d5d455 208 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 138 166 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DA442_09165 55244164acb0391dc87a6895c5d5d455 208 Gene3D G3DSA:2.160.10.10 1 201 3.5E-66 T 14-10-2018 DA442_09165 55244164acb0391dc87a6895c5d5d455 208 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 129 164 1.3E-13 T 14-10-2018 IPR001451 Hexapeptide repeat DA442_09165 55244164acb0391dc87a6895c5d5d455 208 SMART SM01266 4 58 1.6E-13 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 DA442_09165 55244164acb0391dc87a6895c5d5d455 208 SUPERFAMILY SSF51161 5 195 5.96E-52 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily DA442_09165 55244164acb0391dc87a6895c5d5d455 208 Pfam PF12464 Maltose acetyltransferase 11 57 7.2E-12 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 DA442_18775 3653e1896d2fd388c1962c8037e596ed 484 Gene3D G3DSA:1.50.10.10 33 428 9.5E-21 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 DA442_18775 3653e1896d2fd388c1962c8037e596ed 484 SUPERFAMILY SSF48208 29 449 2.64E-52 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 DA442_20225 8f76b1ee542a73eb47bc1f5032994a1c 222 Gene3D G3DSA:1.10.10.10 126 222 1.3E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_20225 8f76b1ee542a73eb47bc1f5032994a1c 222 SUPERFAMILY SSF52172 1 166 1.27E-38 T 14-10-2018 IPR011006 CheY-like superfamily DA442_20225 8f76b1ee542a73eb47bc1f5032994a1c 222 SMART SM00448 1 113 3.2E-43 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_20225 8f76b1ee542a73eb47bc1f5032994a1c 222 Pfam PF00072 Response regulator receiver domain 3 113 3.2E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_20225 8f76b1ee542a73eb47bc1f5032994a1c 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 1.7E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DA442_20225 8f76b1ee542a73eb47bc1f5032994a1c 222 Gene3D G3DSA:3.40.50.2300 1 124 3.4E-37 T 14-10-2018 DA442_20225 8f76b1ee542a73eb47bc1f5032994a1c 222 SMART SM00862 146 220 7.9E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DA442_14825 11ab6c57db63f3dc0e0f08c5bcb73bc9 358 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 190 206 - T 14-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 DA442_14825 11ab6c57db63f3dc0e0f08c5bcb73bc9 358 Gene3D G3DSA:1.10.340.30 19 130 8.8E-88 T 14-10-2018 DA442_14825 11ab6c57db63f3dc0e0f08c5bcb73bc9 358 SUPERFAMILY SSF55811 218 353 4.35E-27 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DA442_14825 11ab6c57db63f3dc0e0f08c5bcb73bc9 358 SUPERFAMILY SSF48150 3 223 2.67E-74 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 DA442_14825 11ab6c57db63f3dc0e0f08c5bcb73bc9 358 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 166 9.7E-22 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DA442_14825 11ab6c57db63f3dc0e0f08c5bcb73bc9 358 Pfam PF14815 NUDIX domain 242 352 6.6E-22 T 14-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 DA442_14825 11ab6c57db63f3dc0e0f08c5bcb73bc9 358 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 4 270 1.9E-125 T 14-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 DA442_14825 11ab6c57db63f3dc0e0f08c5bcb73bc9 358 SMART SM00525 189 209 1.2E-4 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 DA442_14825 11ab6c57db63f3dc0e0f08c5bcb73bc9 358 SMART SM00478 37 188 2.0E-44 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DA442_14825 11ab6c57db63f3dc0e0f08c5bcb73bc9 358 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 190 206 1.3E-4 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 DA442_14825 11ab6c57db63f3dc0e0f08c5bcb73bc9 358 Gene3D G3DSA:1.10.1670.10 7 209 8.8E-88 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 DA442_14825 11ab6c57db63f3dc0e0f08c5bcb73bc9 358 Gene3D G3DSA:3.90.79.10 223 356 1.4E-17 T 14-10-2018 DA442_14825 11ab6c57db63f3dc0e0f08c5bcb73bc9 358 Pfam PF00633 Helix-hairpin-helix motif 98 125 1.4E-5 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 DA442_02085 559a01d407bf0f0177dd5776985f09e0 620 Gene3D G3DSA:1.10.10.10 459 535 2.6E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_02085 559a01d407bf0f0177dd5776985f09e0 620 Pfam PF04546 Sigma-70, non-essential region 139 355 6.8E-67 T 14-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DA442_02085 559a01d407bf0f0177dd5776985f09e0 620 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 382 618 2.2E-120 T 14-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 DA442_02085 559a01d407bf0f0177dd5776985f09e0 620 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 579 605 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DA442_02085 559a01d407bf0f0177dd5776985f09e0 620 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 410 423 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DA442_02085 559a01d407bf0f0177dd5776985f09e0 620 Pfam PF04539 Sigma-70 region 3 465 540 1.3E-28 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 DA442_02085 559a01d407bf0f0177dd5776985f09e0 620 PRINTS PR00046 Major sigma-70 factor signature 434 442 3.2E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DA442_02085 559a01d407bf0f0177dd5776985f09e0 620 PRINTS PR00046 Major sigma-70 factor signature 594 605 3.2E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DA442_02085 559a01d407bf0f0177dd5776985f09e0 620 PRINTS PR00046 Major sigma-70 factor signature 558 570 3.2E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DA442_02085 559a01d407bf0f0177dd5776985f09e0 620 PRINTS PR00046 Major sigma-70 factor signature 410 423 3.2E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DA442_02085 559a01d407bf0f0177dd5776985f09e0 620 PRINTS PR00046 Major sigma-70 factor signature 579 594 3.2E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DA442_02085 559a01d407bf0f0177dd5776985f09e0 620 Gene3D G3DSA:1.10.601.10 113 455 5.4E-139 T 14-10-2018 DA442_02085 559a01d407bf0f0177dd5776985f09e0 620 Gene3D G3DSA:1.10.220.120 1 64 2.5E-29 T 14-10-2018 DA442_02085 559a01d407bf0f0177dd5776985f09e0 620 SUPERFAMILY SSF88659 459 532 2.22E-20 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DA442_02085 559a01d407bf0f0177dd5776985f09e0 620 Pfam PF03979 Sigma-70 factor, region 1.1 4 80 3.0E-28 T 14-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 DA442_02085 559a01d407bf0f0177dd5776985f09e0 620 Pfam PF04542 Sigma-70 region 2 386 455 1.7E-21 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DA442_02085 559a01d407bf0f0177dd5776985f09e0 620 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 1.3E-12 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DA442_02085 559a01d407bf0f0177dd5776985f09e0 620 SUPERFAMILY SSF88946 115 453 1.57E-95 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DA442_02085 559a01d407bf0f0177dd5776985f09e0 620 Pfam PF04545 Sigma-70, region 4 554 607 1.8E-19 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 DA442_02085 559a01d407bf0f0177dd5776985f09e0 620 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 619 45.744 T 14-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 DA442_02085 559a01d407bf0f0177dd5776985f09e0 620 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 382 607 6.0E-38 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DA442_02085 559a01d407bf0f0177dd5776985f09e0 620 SUPERFAMILY SSF88659 516 618 9.38E-26 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DA442_02085 559a01d407bf0f0177dd5776985f09e0 620 Gene3D G3DSA:1.10.10.10 536 620 1.3E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_02305 19bdfce94b1f00b67d75dff89370d2a6 603 SUPERFAMILY SSF53822 260 599 1.84E-69 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DA442_02305 19bdfce94b1f00b67d75dff89370d2a6 603 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 1 603 29.87 T 14-10-2018 IPR007443 Penicillin-binding protein activator LpoA DA442_02305 19bdfce94b1f00b67d75dff89370d2a6 603 Gene3D G3DSA:1.25.40.10 23 146 4.0E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_02305 19bdfce94b1f00b67d75dff89370d2a6 603 Gene3D G3DSA:1.25.40.650 149 254 5.8E-17 T 14-10-2018 DA442_02305 19bdfce94b1f00b67d75dff89370d2a6 603 Gene3D G3DSA:3.40.50.2300 261 596 7.9E-63 T 14-10-2018 DA442_02305 19bdfce94b1f00b67d75dff89370d2a6 603 Gene3D G3DSA:3.40.50.2300 369 597 7.9E-63 T 14-10-2018 DA442_02305 19bdfce94b1f00b67d75dff89370d2a6 603 Pfam PF04348 LppC putative lipoprotein 40 599 6.1E-162 T 14-10-2018 IPR007443 Penicillin-binding protein activator LpoA DA442_10675 d61aa2dcf8bf722dc345837d7613f788 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 494 1.9E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_10675 d61aa2dcf8bf722dc345837d7613f788 541 SUPERFAMILY SSF58104 224 533 3.14E-61 T 14-10-2018 DA442_10675 d61aa2dcf8bf722dc345837d7613f788 541 SMART SM00283 271 532 1.3E-46 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_10675 d61aa2dcf8bf722dc345837d7613f788 541 Gene3D G3DSA:1.10.287.950 203 534 1.7E-63 T 14-10-2018 DA442_10675 d61aa2dcf8bf722dc345837d7613f788 541 SMART SM00304 203 256 1.4E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_18555 38517df514194cb8e6ecf921aa100aae 1221 SMART SM00388 667 732 3.3E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_18555 38517df514194cb8e6ecf921aa100aae 1221 Gene3D G3DSA:3.40.50.2300 994 1117 1.1E-28 T 14-10-2018 DA442_18555 38517df514194cb8e6ecf921aa100aae 1221 SMART SM00387 779 890 1.4E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_18555 38517df514194cb8e6ecf921aa100aae 1221 Gene3D G3DSA:3.40.190.10 354 444 1.4E-21 T 14-10-2018 DA442_18555 38517df514194cb8e6ecf921aa100aae 1221 Gene3D G3DSA:3.40.190.10 120 210 2.9E-24 T 14-10-2018 DA442_18555 38517df514194cb8e6ecf921aa100aae 1221 SUPERFAMILY SSF47384 652 733 4.32E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DA442_18555 38517df514194cb8e6ecf921aa100aae 1221 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 274 478 3.3E-12 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DA442_18555 38517df514194cb8e6ecf921aa100aae 1221 Pfam PF00072 Response regulator receiver domain 996 1106 3.2E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_18555 38517df514194cb8e6ecf921aa100aae 1221 Pfam PF00512 His Kinase A (phospho-acceptor) domain 668 732 8.7E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_18555 38517df514194cb8e6ecf921aa100aae 1221 PRINTS PR00344 Bacterial sensor protein C-terminal signature 815 829 1.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_18555 38517df514194cb8e6ecf921aa100aae 1221 PRINTS PR00344 Bacterial sensor protein C-terminal signature 874 887 1.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_18555 38517df514194cb8e6ecf921aa100aae 1221 PRINTS PR00344 Bacterial sensor protein C-terminal signature 850 868 1.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_18555 38517df514194cb8e6ecf921aa100aae 1221 SUPERFAMILY SSF53850 49 234 7.82E-26 T 14-10-2018 DA442_18555 38517df514194cb8e6ecf921aa100aae 1221 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 234 1.7E-22 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DA442_18555 38517df514194cb8e6ecf921aa100aae 1221 Gene3D G3DSA:1.10.287.130 636 730 2.3E-21 T 14-10-2018 DA442_18555 38517df514194cb8e6ecf921aa100aae 1221 Gene3D G3DSA:1.20.120.160 1118 1218 7.7E-8 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 DA442_18555 38517df514194cb8e6ecf921aa100aae 1221 Gene3D G3DSA:3.40.190.10 267 478 1.4E-21 T 14-10-2018 DA442_18555 38517df514194cb8e6ecf921aa100aae 1221 SUPERFAMILY SSF53850 269 482 7.82E-17 T 14-10-2018 DA442_18555 38517df514194cb8e6ecf921aa100aae 1221 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 780 889 1.8E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_18555 38517df514194cb8e6ecf921aa100aae 1221 SMART SM00062 33 244 1.4E-9 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DA442_18555 38517df514194cb8e6ecf921aa100aae 1221 SMART SM00062 267 481 2.3E-4 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DA442_18555 38517df514194cb8e6ecf921aa100aae 1221 SUPERFAMILY SSF52172 995 1116 1.57E-29 T 14-10-2018 IPR011006 CheY-like superfamily DA442_18555 38517df514194cb8e6ecf921aa100aae 1221 SMART SM00448 994 1107 5.1E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_18555 38517df514194cb8e6ecf921aa100aae 1221 SUPERFAMILY SSF55874 721 892 3.67E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_18555 38517df514194cb8e6ecf921aa100aae 1221 Gene3D G3DSA:3.30.565.10 731 893 1.7E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_18555 38517df514194cb8e6ecf921aa100aae 1221 SUPERFAMILY SSF47226 1119 1210 8.51E-11 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 DA442_18555 38517df514194cb8e6ecf921aa100aae 1221 Gene3D G3DSA:3.40.190.10 35 233 2.9E-24 T 14-10-2018 DA442_18930 1b86303699f983b37de7accf7f9025e4 577 Gene3D G3DSA:3.40.50.2300 112 222 3.8E-41 T 14-10-2018 DA442_18930 1b86303699f983b37de7accf7f9025e4 577 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 230 566 1.0E-141 T 14-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 DA442_18930 1b86303699f983b37de7accf7f9025e4 577 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 123 206 1.5E-36 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 DA442_18930 1b86303699f983b37de7accf7f9025e4 577 Gene3D G3DSA:3.40.50.2300 1 103 6.8E-26 T 14-10-2018 DA442_18930 1b86303699f983b37de7accf7f9025e4 577 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 124 211 3.5E-17 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DA442_18930 1b86303699f983b37de7accf7f9025e4 577 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 92 2.4E-14 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DA442_18930 1b86303699f983b37de7accf7f9025e4 577 SUPERFAMILY SSF52794 2 101 4.71E-29 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DA442_18930 1b86303699f983b37de7accf7f9025e4 577 SUPERFAMILY SSF52794 121 222 3.14E-37 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DA442_13715 875eb51c3b1912c53782615350b03e51 885 TIGRFAM TIGR02687 TIGR02687: TIGR02687 family protein 5 875 1.2E-283 T 14-10-2018 IPR014060 Conserved hypothetical protein CHP02687 DA442_13715 875eb51c3b1912c53782615350b03e51 885 Pfam PF08665 PglZ domain 495 670 4.2E-66 T 14-10-2018 IPR013973 PglZ domain DA442_13715 875eb51c3b1912c53782615350b03e51 885 SUPERFAMILY SSF53649 604 669 5.05E-6 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DA442_13715 875eb51c3b1912c53782615350b03e51 885 Gene3D G3DSA:3.40.720.10 549 696 3.4E-5 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DA442_20780 aa3a6899a937ac3edbed8610d10ee437 663 SMART SM00861 353 524 1.8E-67 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DA442_20780 aa3a6899a937ac3edbed8610d10ee437 663 Gene3D G3DSA:3.40.50.920 537 663 6.5E-47 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DA442_20780 aa3a6899a937ac3edbed8610d10ee437 663 Pfam PF02779 Transketolase, pyrimidine binding domain 353 523 2.3E-47 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DA442_20780 aa3a6899a937ac3edbed8610d10ee437 663 Gene3D G3DSA:3.40.50.970 2 324 3.4E-132 T 14-10-2018 DA442_20780 aa3a6899a937ac3edbed8610d10ee437 663 SUPERFAMILY SSF52922 532 663 2.49E-45 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DA442_20780 aa3a6899a937ac3edbed8610d10ee437 663 SUPERFAMILY SSF52518 332 525 8.06E-68 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DA442_20780 aa3a6899a937ac3edbed8610d10ee437 663 Pfam PF02780 Transketolase, C-terminal domain 540 654 1.2E-21 T 14-10-2018 IPR033248 Transketolase, C-terminal domain DA442_20780 aa3a6899a937ac3edbed8610d10ee437 663 Gene3D G3DSA:3.40.50.970 325 536 5.4E-85 T 14-10-2018 DA442_20780 aa3a6899a937ac3edbed8610d10ee437 663 ProSitePatterns PS00801 Transketolase signature 1. 11 31 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DA442_20780 aa3a6899a937ac3edbed8610d10ee437 663 ProSitePatterns PS00802 Transketolase signature 2. 466 482 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DA442_20780 aa3a6899a937ac3edbed8610d10ee437 663 TIGRFAM TIGR00232 tktlase_bact: transketolase 6 662 0.0 T 14-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 DA442_20780 aa3a6899a937ac3edbed8610d10ee437 663 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 332 1.8E-167 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DA442_20780 aa3a6899a937ac3edbed8610d10ee437 663 SUPERFAMILY SSF52518 5 319 3.75E-121 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DA442_25530 7aadb0982140f129e489990274c8ccf7 380 Gene3D G3DSA:1.10.287.470 96 169 1.6E-95 T 14-10-2018 DA442_25530 7aadb0982140f129e489990274c8ccf7 380 Gene3D G3DSA:2.40.50.100 61 205 1.6E-95 T 14-10-2018 DA442_25530 7aadb0982140f129e489990274c8ccf7 380 Pfam PF13533 Biotin-lipoyl like 63 110 4.3E-14 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain DA442_25530 7aadb0982140f129e489990274c8ccf7 380 Gene3D G3DSA:2.40.420.20 302 370 1.6E-95 T 14-10-2018 DA442_25530 7aadb0982140f129e489990274c8ccf7 380 SUPERFAMILY SSF111369 50 295 1.31E-59 T 14-10-2018 DA442_25530 7aadb0982140f129e489990274c8ccf7 380 Gene3D G3DSA:2.40.30.170 49 300 1.6E-95 T 14-10-2018 DA442_25530 7aadb0982140f129e489990274c8ccf7 380 Pfam PF13437 HlyD family secretion protein 173 287 8.6E-8 T 14-10-2018 DA442_25530 7aadb0982140f129e489990274c8ccf7 380 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 37 371 1.0E-84 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DA442_04860 48aefd042fd0cf276d3551f7e685df01 288 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 126 146 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 DA442_04860 48aefd042fd0cf276d3551f7e685df01 288 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 18 287 56.471 T 14-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 DA442_04860 48aefd042fd0cf276d3551f7e685df01 288 Gene3D G3DSA:1.10.12.10 226 276 5.4E-31 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal DA442_04860 48aefd042fd0cf276d3551f7e685df01 288 Pfam PF00378 Enoyl-CoA hydratase/isomerase 34 282 3.7E-78 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 DA442_04860 48aefd042fd0cf276d3551f7e685df01 288 TIGRFAM TIGR01929 menB: naphthoate synthase 25 284 6.2E-145 T 14-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 DA442_04860 48aefd042fd0cf276d3551f7e685df01 288 Gene3D G3DSA:3.90.226.10 3 225 3.4E-84 T 14-10-2018 DA442_04860 48aefd042fd0cf276d3551f7e685df01 288 SUPERFAMILY SSF52096 22 284 2.28E-78 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DA442_03360 e6230cf9c56c805cff3c435fda177dba 381 SUPERFAMILY SSF49493 115 265 1.05E-19 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 DA442_03360 e6230cf9c56c805cff3c435fda177dba 381 Gene3D G3DSA:2.60.260.20 257 365 8.3E-29 T 14-10-2018 DA442_03360 e6230cf9c56c805cff3c435fda177dba 381 Gene3D G3DSA:1.10.287.110 1 116 2.2E-36 T 14-10-2018 IPR036869 Chaperone J-domain superfamily DA442_03360 e6230cf9c56c805cff3c435fda177dba 381 SUPERFAMILY SSF46565 1 113 5.23E-36 T 14-10-2018 IPR036869 Chaperone J-domain superfamily DA442_03360 e6230cf9c56c805cff3c435fda177dba 381 PRINTS PR00625 DnaJ domain signature 25 40 3.7E-32 T 14-10-2018 IPR001623 DnaJ domain DA442_03360 e6230cf9c56c805cff3c435fda177dba 381 PRINTS PR00625 DnaJ domain signature 62 81 3.7E-32 T 14-10-2018 IPR001623 DnaJ domain DA442_03360 e6230cf9c56c805cff3c435fda177dba 381 PRINTS PR00625 DnaJ domain signature 7 25 3.7E-32 T 14-10-2018 IPR001623 DnaJ domain DA442_03360 e6230cf9c56c805cff3c435fda177dba 381 PRINTS PR00625 DnaJ domain signature 42 62 3.7E-32 T 14-10-2018 IPR001623 DnaJ domain DA442_03360 e6230cf9c56c805cff3c435fda177dba 381 SMART SM00271 4 62 5.4E-31 T 14-10-2018 IPR001623 DnaJ domain DA442_03360 e6230cf9c56c805cff3c435fda177dba 381 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 375 42.922 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 DA442_03360 e6230cf9c56c805cff3c435fda177dba 381 SUPERFAMILY SSF49493 261 346 7.85E-23 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 DA442_03360 e6230cf9c56c805cff3c435fda177dba 381 Pfam PF01556 DnaJ C terminal domain 123 335 1.2E-45 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal DA442_03360 e6230cf9c56c805cff3c435fda177dba 381 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 14-10-2018 IPR018253 DnaJ domain, conserved site DA442_03360 e6230cf9c56c805cff3c435fda177dba 381 Pfam PF00684 DnaJ central domain 149 209 4.3E-15 T 14-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 DA442_03360 e6230cf9c56c805cff3c435fda177dba 381 SUPERFAMILY SSF57938 136 212 3.01E-23 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily DA442_03360 e6230cf9c56c805cff3c435fda177dba 381 Gene3D G3DSA:2.10.230.10 141 211 1.8E-25 T 14-10-2018 DA442_03360 e6230cf9c56c805cff3c435fda177dba 381 Pfam PF00226 DnaJ domain 5 67 6.7E-27 T 14-10-2018 IPR001623 DnaJ domain DA442_03360 e6230cf9c56c805cff3c435fda177dba 381 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 351 1.1E-140 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 DA442_17200 78faf75f72b86c8e3681e84d511ad671 260 SUPERFAMILY SSF69572 2 251 8.24E-75 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 DA442_17200 78faf75f72b86c8e3681e84d511ad671 260 Pfam PF00899 ThiF family 10 247 5.7E-58 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 DA442_17200 78faf75f72b86c8e3681e84d511ad671 260 Gene3D G3DSA:3.40.50.720 2 258 1.4E-83 T 14-10-2018 DA442_17200 78faf75f72b86c8e3681e84d511ad671 260 TIGRFAM TIGR02356 adenyl_thiF: thiazole biosynthesis adenylyltransferase ThiF 9 214 1.7E-88 T 14-10-2018 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF KEGG: 00730+2.7.7.73|MetaCyc: PWY-6891|MetaCyc: PWY-6892 DA442_21775 5c6ab9a4c4f1b73bf7ef312802d4a37f 666 Pfam PF00326 Prolyl oligopeptidase family 447 660 3.1E-55 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 DA442_21775 5c6ab9a4c4f1b73bf7ef312802d4a37f 666 Gene3D G3DSA:3.40.50.1820 22 656 2.8E-145 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_21775 5c6ab9a4c4f1b73bf7ef312802d4a37f 666 SUPERFAMILY SSF53474 406 655 3.74E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_21775 5c6ab9a4c4f1b73bf7ef312802d4a37f 666 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 515 535 6.5E-35 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 DA442_21775 5c6ab9a4c4f1b73bf7ef312802d4a37f 666 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 458 482 6.5E-35 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 DA442_21775 5c6ab9a4c4f1b73bf7ef312802d4a37f 666 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 432 450 6.5E-35 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 DA442_21775 5c6ab9a4c4f1b73bf7ef312802d4a37f 666 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 573 588 6.5E-35 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 DA442_21775 5c6ab9a4c4f1b73bf7ef312802d4a37f 666 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 591 613 6.5E-35 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 DA442_21775 5c6ab9a4c4f1b73bf7ef312802d4a37f 666 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 486 505 6.5E-35 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 DA442_21775 5c6ab9a4c4f1b73bf7ef312802d4a37f 666 Gene3D G3DSA:2.130.10.120 73 392 2.8E-145 T 14-10-2018 DA442_21775 5c6ab9a4c4f1b73bf7ef312802d4a37f 666 SUPERFAMILY SSF50993 14 387 1.96E-30 T 14-10-2018 DA442_21775 5c6ab9a4c4f1b73bf7ef312802d4a37f 666 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 14 390 6.2E-24 T 14-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 DA442_18995 b78a7c2c372531c762cce9242aaba1ce 459 Gene3D G3DSA:1.20.1250.20 20 221 2.3E-38 T 14-10-2018 DA442_18995 b78a7c2c372531c762cce9242aaba1ce 459 PIRSF PIRSF002808 12 452 8.2E-104 T 14-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 DA442_18995 b78a7c2c372531c762cce9242aaba1ce 459 Gene3D G3DSA:1.20.1250.20 242 443 7.4E-33 T 14-10-2018 DA442_18995 b78a7c2c372531c762cce9242aaba1ce 459 Pfam PF07690 Major Facilitator Superfamily 37 391 6.3E-40 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DA442_18995 b78a7c2c372531c762cce9242aaba1ce 459 SUPERFAMILY SSF103473 18 450 2.22E-64 T 14-10-2018 IPR036259 MFS transporter superfamily DA442_08055 387205274ae6586a7736ffb465896e31 239 Pfam PF00005 ABC transporter 25 165 1.1E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_08055 387205274ae6586a7736ffb465896e31 239 Gene3D G3DSA:3.40.50.300 1 237 2.8E-51 T 14-10-2018 DA442_08055 387205274ae6586a7736ffb465896e31 239 SUPERFAMILY SSF52540 5 216 5.33E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_08055 387205274ae6586a7736ffb465896e31 239 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_08055 387205274ae6586a7736ffb465896e31 239 SMART SM00382 29 202 9.3E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_20945 5c03b403bb68b142be5e1835d6dad680 223 Pfam PF08239 Bacterial SH3 domain 73 130 1.8E-8 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type DA442_20945 5c03b403bb68b142be5e1835d6dad680 223 Gene3D G3DSA:2.30.30.40 63 142 7.7E-7 T 14-10-2018 DA442_14705 b39028ba9affaee87bcd6f32e2da6e43 652 Gene3D G3DSA:2.40.170.20 167 652 7.9E-134 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DA442_14705 b39028ba9affaee87bcd6f32e2da6e43 652 Gene3D G3DSA:2.170.130.10 28 161 1.0E-40 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DA442_14705 b39028ba9affaee87bcd6f32e2da6e43 652 SUPERFAMILY SSF56935 33 652 1.42E-127 T 14-10-2018 DA442_14705 b39028ba9affaee87bcd6f32e2da6e43 652 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 156 1.0E-27 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain DA442_14705 b39028ba9affaee87bcd6f32e2da6e43 652 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 40 - T 14-10-2018 IPR010916 TonB box, conserved site DA442_14705 b39028ba9affaee87bcd6f32e2da6e43 652 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 635 652 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site DA442_14705 b39028ba9affaee87bcd6f32e2da6e43 652 Pfam PF00593 TonB dependent receptor 199 650 7.7E-61 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DA442_04715 c0e0dc55dd700db8d41ed52523b5df7c 450 Gene3D G3DSA:3.30.465.10 350 435 9.8E-26 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DA442_04715 c0e0dc55dd700db8d41ed52523b5df7c 450 SUPERFAMILY SSF54631 209 342 1.39E-22 T 14-10-2018 DA442_04715 c0e0dc55dd700db8d41ed52523b5df7c 450 SMART SM01091 353 435 4.9E-25 T 14-10-2018 IPR005170 Transporter-associated domain DA442_04715 c0e0dc55dd700db8d41ed52523b5df7c 450 Gene3D G3DSA:3.10.580.10 202 349 1.3E-35 T 14-10-2018 DA442_04715 c0e0dc55dd700db8d41ed52523b5df7c 450 SUPERFAMILY SSF56176 354 433 7.63E-21 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DA442_04715 c0e0dc55dd700db8d41ed52523b5df7c 450 Pfam PF01595 Domain of unknown function DUF21 16 206 2.6E-42 T 14-10-2018 IPR002550 CNNM, transmembrane domain DA442_04715 c0e0dc55dd700db8d41ed52523b5df7c 450 Pfam PF03471 Transporter associated domain 354 434 5.0E-20 T 14-10-2018 IPR005170 Transporter-associated domain DA442_14975 816a9d4ada2159d98d21889893eae897 103 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 6 97 1.3E-33 T 14-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 DA442_14975 816a9d4ada2159d98d21889893eae897 103 Gene3D G3DSA:1.20.58.280 1 101 9.5E-35 T 14-10-2018 DA442_14975 816a9d4ada2159d98d21889893eae897 103 PIRSF PIRSF000699 1 103 2.7E-37 T 14-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 DA442_14975 816a9d4ada2159d98d21889893eae897 103 SUPERFAMILY SSF46973 2 98 4.32E-34 T 14-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 DA442_06420 cbb1b2fbd4df1198f387b1ac3d8662a6 319 SUPERFAMILY SSF51905 2 313 4.67E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_06420 cbb1b2fbd4df1198f387b1ac3d8662a6 319 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 1.8E-124 T 14-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 DA442_06420 cbb1b2fbd4df1198f387b1ac3d8662a6 319 Gene3D G3DSA:3.50.50.60 10 312 3.1E-128 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_06420 cbb1b2fbd4df1198f387b1ac3d8662a6 319 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 DA442_06420 cbb1b2fbd4df1198f387b1ac3d8662a6 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 5.8E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DA442_06420 cbb1b2fbd4df1198f387b1ac3d8662a6 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 5.8E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DA442_06420 cbb1b2fbd4df1198f387b1ac3d8662a6 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 5.8E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DA442_06420 cbb1b2fbd4df1198f387b1ac3d8662a6 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 5.8E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DA442_06420 cbb1b2fbd4df1198f387b1ac3d8662a6 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 5.8E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DA442_06420 cbb1b2fbd4df1198f387b1ac3d8662a6 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 5.8E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DA442_06420 cbb1b2fbd4df1198f387b1ac3d8662a6 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 5.8E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DA442_06420 cbb1b2fbd4df1198f387b1ac3d8662a6 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 5.8E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DA442_06420 cbb1b2fbd4df1198f387b1ac3d8662a6 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 5.8E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DA442_06420 cbb1b2fbd4df1198f387b1ac3d8662a6 319 Gene3D G3DSA:3.50.50.60 118 244 3.1E-128 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_06420 cbb1b2fbd4df1198f387b1ac3d8662a6 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.1E-38 T 14-10-2018 DA442_06420 cbb1b2fbd4df1198f387b1ac3d8662a6 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 2.1E-38 T 14-10-2018 DA442_06420 cbb1b2fbd4df1198f387b1ac3d8662a6 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 2.1E-38 T 14-10-2018 DA442_06420 cbb1b2fbd4df1198f387b1ac3d8662a6 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 2.1E-38 T 14-10-2018 DA442_06420 cbb1b2fbd4df1198f387b1ac3d8662a6 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 2.1E-38 T 14-10-2018 DA442_06420 cbb1b2fbd4df1198f387b1ac3d8662a6 319 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 4.8E-47 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DA442_00350 85cf746c4f562e2779801a60b9eb7334 310 Gene3D G3DSA:1.10.10.10 13 103 3.5E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_00350 85cf746c4f562e2779801a60b9eb7334 310 SUPERFAMILY SSF53850 107 309 1.77E-19 T 14-10-2018 DA442_00350 85cf746c4f562e2779801a60b9eb7334 310 Gene3D G3DSA:3.40.190.10 182 284 8.7E-34 T 14-10-2018 DA442_00350 85cf746c4f562e2779801a60b9eb7334 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 79 4.8E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_00350 85cf746c4f562e2779801a60b9eb7334 310 SUPERFAMILY SSF46785 19 101 6.57E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_00350 85cf746c4f562e2779801a60b9eb7334 310 Gene3D G3DSA:3.40.190.10 110 303 8.7E-34 T 14-10-2018 DA442_00350 85cf746c4f562e2779801a60b9eb7334 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 56 1.7E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_00350 85cf746c4f562e2779801a60b9eb7334 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 46 1.7E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_00350 85cf746c4f562e2779801a60b9eb7334 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 56 67 1.7E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_00350 85cf746c4f562e2779801a60b9eb7334 310 Pfam PF03466 LysR substrate binding domain 107 308 3.2E-20 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_07935 2aa22a90727cda83c2942fc945fa8eb1 300 Gene3D G3DSA:3.30.1330.60 145 276 2.9E-27 T 14-10-2018 IPR036737 OmpA-like domain superfamily DA442_07935 2aa22a90727cda83c2942fc945fa8eb1 300 PRINTS PR01021 OMPA domain signature 212 228 5.4E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DA442_07935 2aa22a90727cda83c2942fc945fa8eb1 300 PRINTS PR01021 OMPA domain signature 197 212 5.4E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DA442_07935 2aa22a90727cda83c2942fc945fa8eb1 300 PRINTS PR01021 OMPA domain signature 167 189 5.4E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DA442_07935 2aa22a90727cda83c2942fc945fa8eb1 300 Pfam PF00691 OmpA family 167 261 7.1E-20 T 14-10-2018 IPR006665 OmpA-like domain DA442_07935 2aa22a90727cda83c2942fc945fa8eb1 300 SUPERFAMILY SSF103088 156 267 4.71E-29 T 14-10-2018 IPR036737 OmpA-like domain superfamily DA442_04800 a77b7ebb47ca2e0217f201d6cb42daae 783 SMART SM00382 347 491 1.4E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_04800 a77b7ebb47ca2e0217f201d6cb42daae 783 Gene3D G3DSA:3.30.230.10 584 771 1.4E-85 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DA442_04800 a77b7ebb47ca2e0217f201d6cb42daae 783 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 351 488 3.1E-17 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DA442_04800 a77b7ebb47ca2e0217f201d6cb42daae 783 SUPERFAMILY SSF52540 312 586 1.83E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_04800 a77b7ebb47ca2e0217f201d6cb42daae 783 Hamap MF_01973 Lon protease [lon]. 11 771 72.006 T 14-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 DA442_04800 a77b7ebb47ca2e0217f201d6cb42daae 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 355 374 2.3E-56 T 14-10-2018 DA442_04800 a77b7ebb47ca2e0217f201d6cb42daae 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 672 691 2.3E-56 T 14-10-2018 DA442_04800 a77b7ebb47ca2e0217f201d6cb42daae 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 702 721 2.3E-56 T 14-10-2018 DA442_04800 a77b7ebb47ca2e0217f201d6cb42daae 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 594 610 2.3E-56 T 14-10-2018 DA442_04800 a77b7ebb47ca2e0217f201d6cb42daae 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 725 743 2.3E-56 T 14-10-2018 DA442_04800 a77b7ebb47ca2e0217f201d6cb42daae 783 SUPERFAMILY SSF54211 594 769 2.01E-59 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DA442_04800 a77b7ebb47ca2e0217f201d6cb42daae 783 PIRSF PIRSF001174 1 774 0.0 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 DA442_04800 a77b7ebb47ca2e0217f201d6cb42daae 783 TIGRFAM TIGR00763 lon: endopeptidase La 12 770 0.0 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 DA442_04800 a77b7ebb47ca2e0217f201d6cb42daae 783 Gene3D G3DSA:3.40.50.300 312 489 6.9E-61 T 14-10-2018 DA442_04800 a77b7ebb47ca2e0217f201d6cb42daae 783 Gene3D G3DSA:1.20.58.1480 119 244 6.2E-44 T 14-10-2018 DA442_04800 a77b7ebb47ca2e0217f201d6cb42daae 783 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 196 7.1E-41 T 14-10-2018 IPR003111 Lon, substrate-binding domain DA442_04800 a77b7ebb47ca2e0217f201d6cb42daae 783 Gene3D G3DSA:2.30.130.40 1 116 1.6E-35 T 14-10-2018 DA442_04800 a77b7ebb47ca2e0217f201d6cb42daae 783 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 569 771 4.5E-100 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 DA442_04800 a77b7ebb47ca2e0217f201d6cb42daae 783 Gene3D G3DSA:1.10.8.60 490 583 2.6E-33 T 14-10-2018 DA442_04800 a77b7ebb47ca2e0217f201d6cb42daae 783 SUPERFAMILY SSF88697 10 200 1.74E-48 T 14-10-2018 IPR015947 PUA-like superfamily DA442_04800 a77b7ebb47ca2e0217f201d6cb42daae 783 SMART SM00464 10 201 1.4E-76 T 14-10-2018 IPR003111 Lon, substrate-binding domain DA442_20200 3d54926df11116de5de1e6ededbddbb3 592 Pfam PF00082 Subtilase family 65 388 1.0E-30 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 DA442_20200 3d54926df11116de5de1e6ededbddbb3 592 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 339 349 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site DA442_20200 3d54926df11116de5de1e6ededbddbb3 592 PRINTS PR00723 Subtilisin serine protease family (S8) signature 65 84 3.6E-17 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related DA442_20200 3d54926df11116de5de1e6ededbddbb3 592 PRINTS PR00723 Subtilisin serine protease family (S8) signature 108 121 3.6E-17 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related DA442_20200 3d54926df11116de5de1e6ededbddbb3 592 PRINTS PR00723 Subtilisin serine protease family (S8) signature 338 354 3.6E-17 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related DA442_20200 3d54926df11116de5de1e6ededbddbb3 592 SUPERFAMILY SSF52743 23 432 2.88E-58 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 DA442_20200 3d54926df11116de5de1e6ededbddbb3 592 Pfam PF01483 Proprotein convertase P-domain 475 556 1.7E-20 T 14-10-2018 IPR002884 P domain GO:0004252|GO:0006508 DA442_20200 3d54926df11116de5de1e6ededbddbb3 592 SUPERFAMILY SSF49785 438 592 3.4E-25 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily DA442_20200 3d54926df11116de5de1e6ededbddbb3 592 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 112 122 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site DA442_20200 3d54926df11116de5de1e6ededbddbb3 592 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 70 81 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site DA442_20200 3d54926df11116de5de1e6ededbddbb3 592 Gene3D G3DSA:3.40.50.200 19 434 1.4E-98 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 DA442_20200 3d54926df11116de5de1e6ededbddbb3 592 Gene3D G3DSA:2.60.120.260 438 592 8.9E-51 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily DA442_06615 8a399760f23f5c0d9b14f5aa45f8912a 381 Pfam PF01814 Hemerythrin HHE cation binding domain 13 128 8.4E-9 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 DA442_06615 8a399760f23f5c0d9b14f5aa45f8912a 381 SUPERFAMILY SSF47188 3 131 1.57E-26 T 14-10-2018 IPR035938 Hemerythrin-like superfamily DA442_06615 8a399760f23f5c0d9b14f5aa45f8912a 381 Gene3D G3DSA:3.30.70.270 192 365 1.3E-49 T 14-10-2018 DA442_06615 8a399760f23f5c0d9b14f5aa45f8912a 381 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 5 132 8.0E-32 T 14-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 DA442_06615 8a399760f23f5c0d9b14f5aa45f8912a 381 Gene3D G3DSA:1.20.120.50 2 136 3.4E-27 T 14-10-2018 IPR035938 Hemerythrin-like superfamily DA442_06615 8a399760f23f5c0d9b14f5aa45f8912a 381 Pfam PF00990 Diguanylate cyclase, GGDEF domain 207 363 3.9E-43 T 14-10-2018 IPR000160 GGDEF domain DA442_06615 8a399760f23f5c0d9b14f5aa45f8912a 381 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 202 366 7.0E-47 T 14-10-2018 IPR000160 GGDEF domain DA442_06615 8a399760f23f5c0d9b14f5aa45f8912a 381 SUPERFAMILY SSF55073 211 366 2.51E-43 T 14-10-2018 IPR029787 Nucleotide cyclase DA442_06615 8a399760f23f5c0d9b14f5aa45f8912a 381 SMART SM00267 195 367 4.0E-47 T 14-10-2018 IPR000160 GGDEF domain DA442_08725 d8828d82dda0088146eea54e2eadcda7 440 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 358 2.2E-78 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DA442_08725 d8828d82dda0088146eea54e2eadcda7 440 TIGRFAM TIGR02546 III_secr_ATP: type III secretion apparatus H+-transporting two-sector ATPase 21 437 1.3E-200 T 14-10-2018 IPR013380 ATPase, type III secretion system, H+-transporting GO:0005524|GO:0005737|GO:0006754|GO:0030254|GO:0030257|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DA442_08725 d8828d82dda0088146eea54e2eadcda7 440 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 27 92 2.1E-9 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DA442_08725 d8828d82dda0088146eea54e2eadcda7 440 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 13 437 2.5E-175 T 14-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DA442_08725 d8828d82dda0088146eea54e2eadcda7 440 SUPERFAMILY SSF52540 95 364 9.26E-97 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_08725 d8828d82dda0088146eea54e2eadcda7 440 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 349 358 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DA442_08725 d8828d82dda0088146eea54e2eadcda7 440 SMART SM00382 161 342 5.7E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_08725 d8828d82dda0088146eea54e2eadcda7 440 Gene3D G3DSA:3.40.50.12240 16 439 5.8E-152 T 14-10-2018 DA442_21730 988bdf3be5736adf42db5d8c80b88871 249 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_21730 988bdf3be5736adf42db5d8c80b88871 249 SUPERFAMILY SSF52540 4 236 3.51E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_21730 988bdf3be5736adf42db5d8c80b88871 249 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 4 249 3.9E-126 T 14-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 DA442_21730 988bdf3be5736adf42db5d8c80b88871 249 Gene3D G3DSA:3.40.50.300 4 246 7.2E-62 T 14-10-2018 DA442_21730 988bdf3be5736adf42db5d8c80b88871 249 Pfam PF00005 ABC transporter 19 174 1.1E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_21730 988bdf3be5736adf42db5d8c80b88871 249 SMART SM00382 28 220 1.3E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_03635 cb25cedc7ac48ae5914ad083b5adb9c5 315 SUPERFAMILY SSF53822 63 307 2.36E-58 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DA442_03635 cb25cedc7ac48ae5914ad083b5adb9c5 315 Gene3D G3DSA:3.40.50.2300 68 303 3.9E-63 T 14-10-2018 DA442_03635 cb25cedc7ac48ae5914ad083b5adb9c5 315 SUPERFAMILY SSF47413 3 60 1.13E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DA442_03635 cb25cedc7ac48ae5914ad083b5adb9c5 315 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 14-10-2018 DA442_03635 cb25cedc7ac48ae5914ad083b5adb9c5 315 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 1.3E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DA442_03635 cb25cedc7ac48ae5914ad083b5adb9c5 315 Pfam PF13377 Periplasmic binding protein-like domain 168 307 3.8E-16 T 14-10-2018 DA442_03635 cb25cedc7ac48ae5914ad083b5adb9c5 315 Gene3D G3DSA:1.10.260.40 2 60 1.7E-21 T 14-10-2018 DA442_03635 cb25cedc7ac48ae5914ad083b5adb9c5 315 SMART SM00354 4 74 2.1E-32 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DA442_03635 cb25cedc7ac48ae5914ad083b5adb9c5 315 Gene3D G3DSA:3.40.50.2300 163 279 3.9E-63 T 14-10-2018 DA442_03635 cb25cedc7ac48ae5914ad083b5adb9c5 315 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 310 2.7E-139 T 14-10-2018 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 DA442_06690 2c93e361975c87ad8ab1194385d1389b 347 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 3 345 9.7E-128 T 14-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 DA442_06690 2c93e361975c87ad8ab1194385d1389b 347 Pfam PF02277 Phosphoribosyltransferase 2 345 9.0E-126 T 14-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 DA442_06690 2c93e361975c87ad8ab1194385d1389b 347 Gene3D G3DSA:1.10.1610.10 12 345 5.2E-120 T 14-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 DA442_06690 2c93e361975c87ad8ab1194385d1389b 347 Gene3D G3DSA:3.40.50.10210 50 328 5.2E-120 T 14-10-2018 DA442_06690 2c93e361975c87ad8ab1194385d1389b 347 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 1 347 35.438 T 14-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 DA442_06690 2c93e361975c87ad8ab1194385d1389b 347 SUPERFAMILY SSF52733 2 346 1.31E-110 T 14-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 DA442_17820 238dfdee0fa3ee98375112dd5bb329ce 407 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 87 101 - T 14-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DA442_17820 238dfdee0fa3ee98375112dd5bb329ce 407 Gene3D G3DSA:3.40.50.1100 17 212 7.9E-167 T 14-10-2018 DA442_17820 238dfdee0fa3ee98375112dd5bb329ce 407 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 61 384 4.7E-42 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DA442_17820 238dfdee0fa3ee98375112dd5bb329ce 407 PIRSF PIRSF001413 1 403 3.4E-173 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DA442_17820 238dfdee0fa3ee98375112dd5bb329ce 407 Gene3D G3DSA:3.40.50.1100 61 390 7.9E-167 T 14-10-2018 DA442_17820 238dfdee0fa3ee98375112dd5bb329ce 407 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 14 395 4.9E-164 T 14-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DA442_17820 238dfdee0fa3ee98375112dd5bb329ce 407 SUPERFAMILY SSF53686 10 395 2.36E-132 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DA442_17820 238dfdee0fa3ee98375112dd5bb329ce 407 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 9 397 48.367 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DA442_00800 bf80c1b9c8df171bf3f592e22978dcbf 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 3.8E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DA442_00800 bf80c1b9c8df171bf3f592e22978dcbf 239 Gene3D G3DSA:3.40.50.2300 1 125 4.1E-40 T 14-10-2018 DA442_00800 bf80c1b9c8df171bf3f592e22978dcbf 239 SUPERFAMILY SSF52172 3 126 5.41E-42 T 14-10-2018 IPR011006 CheY-like superfamily DA442_00800 bf80c1b9c8df171bf3f592e22978dcbf 239 SUPERFAMILY SSF46894 132 234 2.44E-26 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DA442_00800 bf80c1b9c8df171bf3f592e22978dcbf 239 SMART SM00448 5 116 3.8E-45 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_00800 bf80c1b9c8df171bf3f592e22978dcbf 239 Gene3D G3DSA:1.10.10.10 130 239 2.5E-38 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_00800 bf80c1b9c8df171bf3f592e22978dcbf 239 SMART SM00862 156 232 1.8E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DA442_00800 bf80c1b9c8df171bf3f592e22978dcbf 239 Pfam PF00072 Response regulator receiver domain 7 117 2.1E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_06475 9cf67ac1fd36e99455b8cd0ae7716263 557 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 38 125 2.5E-28 T 14-10-2018 IPR032093 Phospholipase D, N-terminal DA442_06475 9cf67ac1fd36e99455b8cd0ae7716263 557 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 23 0.0012 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DA442_06475 9cf67ac1fd36e99455b8cd0ae7716263 557 Gene3D G3DSA:2.60.40.380 29 127 2.3E-32 T 14-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 DA442_06475 9cf67ac1fd36e99455b8cd0ae7716263 557 SUPERFAMILY SSF56300 136 532 1.79E-32 T 14-10-2018 DA442_06475 9cf67ac1fd36e99455b8cd0ae7716263 557 Gene3D G3DSA:3.60.21.70 128 555 2.0E-122 T 14-10-2018 IPR038607 PhoD-like superfamily DA442_06475 9cf67ac1fd36e99455b8cd0ae7716263 557 Pfam PF09423 PhoD-like phosphatase 136 528 2.6E-117 T 14-10-2018 IPR018946 Alkaline phosphatase D-related DA442_08245 98d676865a9104d68884201ca763dbfe 225 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 8 213 6.7E-56 T 14-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain DA442_03470 26c72eb7335aeeaf7b64a676528cd24e 379 Pfam PF01472 PUA domain 286 360 2.0E-23 T 14-10-2018 IPR002478 PUA domain GO:0003723 DA442_03470 26c72eb7335aeeaf7b64a676528cd24e 379 Pfam PF00696 Amino acid kinase family 15 243 2.4E-41 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DA442_03470 26c72eb7335aeeaf7b64a676528cd24e 379 Hamap MF_00456 Glutamate 5-kinase [proB]. 14 268 35.8 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DA442_03470 26c72eb7335aeeaf7b64a676528cd24e 379 Gene3D G3DSA:2.30.130.10 275 377 9.4E-32 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 DA442_03470 26c72eb7335aeeaf7b64a676528cd24e 379 SUPERFAMILY SSF53633 15 265 6.15E-65 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DA442_03470 26c72eb7335aeeaf7b64a676528cd24e 379 PIRSF PIRSF000729 9 378 6.1E-137 T 14-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 DA442_03470 26c72eb7335aeeaf7b64a676528cd24e 379 Gene3D G3DSA:3.40.1160.10 5 274 5.3E-87 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DA442_03470 26c72eb7335aeeaf7b64a676528cd24e 379 SUPERFAMILY SSF88697 286 376 6.08E-25 T 14-10-2018 IPR015947 PUA-like superfamily DA442_03470 26c72eb7335aeeaf7b64a676528cd24e 379 TIGRFAM TIGR01027 proB: glutamate 5-kinase 14 375 9.1E-148 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DA442_03470 26c72eb7335aeeaf7b64a676528cd24e 379 PRINTS PR00474 Glutamate 5-kinase family signature 85 113 1.3E-53 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DA442_03470 26c72eb7335aeeaf7b64a676528cd24e 379 PRINTS PR00474 Glutamate 5-kinase family signature 218 238 1.3E-53 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DA442_03470 26c72eb7335aeeaf7b64a676528cd24e 379 PRINTS PR00474 Glutamate 5-kinase family signature 125 146 1.3E-53 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DA442_03470 26c72eb7335aeeaf7b64a676528cd24e 379 PRINTS PR00474 Glutamate 5-kinase family signature 157 184 1.3E-53 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DA442_03470 26c72eb7335aeeaf7b64a676528cd24e 379 PRINTS PR00474 Glutamate 5-kinase family signature 51 65 1.3E-53 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DA442_03470 26c72eb7335aeeaf7b64a676528cd24e 379 ProSitePatterns PS00902 Glutamate 5-kinase signature. 216 233 - T 14-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DA442_03470 26c72eb7335aeeaf7b64a676528cd24e 379 SMART SM00359 286 369 4.1E-19 T 14-10-2018 IPR002478 PUA domain GO:0003723 DA442_07825 56c6abd3b58000501e80be21aa17f7c6 194 Gene3D G3DSA:3.40.50.360 1 194 1.0E-55 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DA442_07825 56c6abd3b58000501e80be21aa17f7c6 194 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 194 31.804 T 14-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 DA442_07825 56c6abd3b58000501e80be21aa17f7c6 194 Pfam PF02525 Flavodoxin-like fold 3 190 1.2E-43 T 14-10-2018 IPR003680 Flavodoxin-like fold DA442_07825 56c6abd3b58000501e80be21aa17f7c6 194 SUPERFAMILY SSF52218 1 192 1.4E-50 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DA442_20810 a89aeaf592877405ba6b56136b75c744 329 ProSitePatterns PS01068 OmpA-like domain. 250 294 - T 14-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 DA442_20810 a89aeaf592877405ba6b56136b75c744 329 SUPERFAMILY SSF56925 24 181 6.02E-33 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DA442_20810 a89aeaf592877405ba6b56136b75c744 329 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 301 321 2.4E-10 T 14-10-2018 DA442_20810 a89aeaf592877405ba6b56136b75c744 329 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 281 300 2.4E-10 T 14-10-2018 DA442_20810 a89aeaf592877405ba6b56136b75c744 329 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 263 280 2.4E-10 T 14-10-2018 DA442_20810 a89aeaf592877405ba6b56136b75c744 329 Gene3D G3DSA:2.40.160.20 10 203 1.6E-42 T 14-10-2018 DA442_20810 a89aeaf592877405ba6b56136b75c744 329 PRINTS PR01021 OMPA domain signature 263 279 4.0E-15 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DA442_20810 a89aeaf592877405ba6b56136b75c744 329 PRINTS PR01021 OMPA domain signature 218 240 4.0E-15 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DA442_20810 a89aeaf592877405ba6b56136b75c744 329 PRINTS PR01021 OMPA domain signature 248 263 4.0E-15 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DA442_20810 a89aeaf592877405ba6b56136b75c744 329 SUPERFAMILY SSF103088 211 318 5.89E-38 T 14-10-2018 IPR036737 OmpA-like domain superfamily DA442_20810 a89aeaf592877405ba6b56136b75c744 329 Gene3D G3DSA:3.30.1330.60 204 325 4.1E-44 T 14-10-2018 IPR036737 OmpA-like domain superfamily DA442_20810 a89aeaf592877405ba6b56136b75c744 329 Pfam PF13505 Outer membrane protein beta-barrel domain 6 181 6.0E-24 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel DA442_20810 a89aeaf592877405ba6b56136b75c744 329 Pfam PF00691 OmpA family 217 312 1.9E-24 T 14-10-2018 IPR006665 OmpA-like domain DA442_06020 c0dc0f7b0c25f965ab730e9546d38d4c 336 SUPERFAMILY SSF46689 278 332 7.17E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_06020 c0dc0f7b0c25f965ab730e9546d38d4c 336 SUPERFAMILY SSF52540 4 237 1.77E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_06020 c0dc0f7b0c25f965ab730e9546d38d4c 336 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 5 330 4.9E-166 T 14-10-2018 IPR014317 Transcription activator PspF DA442_06020 c0dc0f7b0c25f965ab730e9546d38d4c 336 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 91 106 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DA442_06020 c0dc0f7b0c25f965ab730e9546d38d4c 336 SMART SM00382 25 177 1.1E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_06020 c0dc0f7b0c25f965ab730e9546d38d4c 336 Gene3D G3DSA:1.10.10.60 265 333 1.9E-7 T 14-10-2018 DA442_06020 c0dc0f7b0c25f965ab730e9546d38d4c 336 Pfam PF00158 Sigma-54 interaction domain 5 167 2.1E-57 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DA442_06020 c0dc0f7b0c25f965ab730e9546d38d4c 336 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 219 228 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site DA442_06020 c0dc0f7b0c25f965ab730e9546d38d4c 336 PRINTS PR00819 CbxX/CfqX superfamily signature 88 107 6.0E-5 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 DA442_06020 c0dc0f7b0c25f965ab730e9546d38d4c 336 PRINTS PR00819 CbxX/CfqX superfamily signature 1 7 6.0E-5 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 DA442_06020 c0dc0f7b0c25f965ab730e9546d38d4c 336 PRINTS PR00819 CbxX/CfqX superfamily signature 222 234 6.0E-5 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 DA442_06020 c0dc0f7b0c25f965ab730e9546d38d4c 336 Gene3D G3DSA:1.10.8.60 177 259 4.8E-26 T 14-10-2018 DA442_06020 c0dc0f7b0c25f965ab730e9546d38d4c 336 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 313 333 2.0E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DA442_06020 c0dc0f7b0c25f965ab730e9546d38d4c 336 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 296 313 2.0E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DA442_06020 c0dc0f7b0c25f965ab730e9546d38d4c 336 Pfam PF02954 Bacterial regulatory protein, Fis family 296 324 4.5E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DA442_06020 c0dc0f7b0c25f965ab730e9546d38d4c 336 Gene3D G3DSA:3.40.50.300 1 176 1.2E-57 T 14-10-2018 DA442_14235 6f60030e8bc91aeb5afd6d326225c660 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 1.8E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_14235 6f60030e8bc91aeb5afd6d326225c660 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 1.8E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_14235 6f60030e8bc91aeb5afd6d326225c660 255 SMART SM00895 99 227 3.6E-18 T 14-10-2018 IPR011711 GntR, C-terminal DA442_14235 6f60030e8bc91aeb5afd6d326225c660 255 SUPERFAMILY SSF48008 98 235 1.67E-20 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DA442_14235 6f60030e8bc91aeb5afd6d326225c660 255 Pfam PF07729 FCD domain 99 226 2.0E-18 T 14-10-2018 IPR011711 GntR, C-terminal DA442_14235 6f60030e8bc91aeb5afd6d326225c660 255 Gene3D G3DSA:1.10.10.10 1 74 1.4E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_14235 6f60030e8bc91aeb5afd6d326225c660 255 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 2.4E-25 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_14235 6f60030e8bc91aeb5afd6d326225c660 255 Gene3D G3DSA:1.20.120.530 97 236 4.9E-27 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DA442_14235 6f60030e8bc91aeb5afd6d326225c660 255 SUPERFAMILY SSF46785 5 76 2.06E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_14235 6f60030e8bc91aeb5afd6d326225c660 255 SMART SM00345 15 74 9.1E-28 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_15060 0108ac24f444563df1014be5cb8cc413 137 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 11 124 29.717 T 14-10-2018 IPR016716 Regulator of ribonuclease activity B DA442_15060 0108ac24f444563df1014be5cb8cc413 137 PIRSF PIRSF018193 8 137 1.1E-58 T 14-10-2018 IPR016716 Regulator of ribonuclease activity B DA442_15060 0108ac24f444563df1014be5cb8cc413 137 Gene3D G3DSA:3.30.70.970 1 132 1.4E-58 T 14-10-2018 IPR036701 RraB-like superfamily DA442_15060 0108ac24f444563df1014be5cb8cc413 137 SUPERFAMILY SSF89946 8 126 3.53E-39 T 14-10-2018 IPR036701 RraB-like superfamily DA442_15060 0108ac24f444563df1014be5cb8cc413 137 Pfam PF06877 Regulator of ribonuclease activity B 18 120 2.9E-34 T 14-10-2018 IPR009671 Regulator of ribonuclease activity B domain DA442_10745 ea9071d9f6a7a6bbc0a7779448963a6e 158 Pfam PF01047 MarR family 31 89 8.9E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DA442_10745 ea9071d9f6a7a6bbc0a7779448963a6e 158 SMART SM00347 24 124 1.8E-19 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DA442_10745 ea9071d9f6a7a6bbc0a7779448963a6e 158 SUPERFAMILY SSF46785 4 141 1.29E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_10745 ea9071d9f6a7a6bbc0a7779448963a6e 158 Gene3D G3DSA:1.10.10.10 1 140 1.4E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_05015 228d3070ee8b65a3c5f280ffc031b72f 539 SUPERFAMILY SSF51905 101 531 6.16E-37 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_05015 228d3070ee8b65a3c5f280ffc031b72f 539 Gene3D G3DSA:3.30.70.2700 1 81 1.4E-34 T 14-10-2018 DA442_05015 228d3070ee8b65a3c5f280ffc031b72f 539 PIRSF PIRSF038984 1 536 1.2E-240 T 14-10-2018 IPR028348 FAD dependent protein DA442_05015 228d3070ee8b65a3c5f280ffc031b72f 539 Gene3D G3DSA:3.50.50.60 471 534 5.0E-16 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_05015 228d3070ee8b65a3c5f280ffc031b72f 539 Gene3D G3DSA:3.50.50.60 86 305 1.5E-91 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_05340 44493be539089c7defa2a1660d6d9190 876 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 603 628 8.0E-6 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 DA442_05340 44493be539089c7defa2a1660d6d9190 876 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 713 750 4.5E-9 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 DA442_05340 44493be539089c7defa2a1660d6d9190 876 SMART SM00493 3 139 1.3E-32 T 14-10-2018 IPR006171 TOPRIM domain DA442_05340 44493be539089c7defa2a1660d6d9190 876 Pfam PF08272 Topoisomerase I zinc-ribbon-like 762 798 2.9E-11 T 14-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 DA442_05340 44493be539089c7defa2a1660d6d9190 876 Pfam PF08272 Topoisomerase I zinc-ribbon-like 829 869 1.8E-18 T 14-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 DA442_05340 44493be539089c7defa2a1660d6d9190 876 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 316 330 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 DA442_05340 44493be539089c7defa2a1660d6d9190 876 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 640 3.9E-248 T 14-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 DA442_05340 44493be539089c7defa2a1660d6d9190 876 Gene3D G3DSA:2.70.20.10 220 479 1.4E-161 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 DA442_05340 44493be539089c7defa2a1660d6d9190 876 Pfam PF01751 Toprim domain 5 149 7.4E-32 T 14-10-2018 IPR006171 TOPRIM domain DA442_05340 44493be539089c7defa2a1660d6d9190 876 Gene3D G3DSA:1.10.460.10 172 577 1.4E-161 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 DA442_05340 44493be539089c7defa2a1660d6d9190 876 SMART SM00436 140 228 2.5E-47 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 DA442_05340 44493be539089c7defa2a1660d6d9190 876 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 737 54.326 T 14-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 DA442_05340 44493be539089c7defa2a1660d6d9190 876 Gene3D G3DSA:1.10.290.10 287 411 1.4E-161 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 DA442_05340 44493be539089c7defa2a1660d6d9190 876 SUPERFAMILY SSF57783 705 747 2.04E-5 T 14-10-2018 DA442_05340 44493be539089c7defa2a1660d6d9190 876 Gene3D G3DSA:3.30.65.10 750 812 1.6E-31 T 14-10-2018 DA442_05340 44493be539089c7defa2a1660d6d9190 876 Gene3D G3DSA:3.30.65.10 700 749 2.0E-6 T 14-10-2018 DA442_05340 44493be539089c7defa2a1660d6d9190 876 SUPERFAMILY SSF56712 3 615 1.31E-198 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain DA442_05340 44493be539089c7defa2a1660d6d9190 876 Gene3D G3DSA:2.20.25.10 813 870 1.2E-28 T 14-10-2018 DA442_05340 44493be539089c7defa2a1660d6d9190 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 198 216 3.6E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DA442_05340 44493be539089c7defa2a1660d6d9190 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 113 126 3.6E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DA442_05340 44493be539089c7defa2a1660d6d9190 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 321 330 3.6E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DA442_05340 44493be539089c7defa2a1660d6d9190 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 397 413 3.6E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DA442_05340 44493be539089c7defa2a1660d6d9190 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 496 510 3.6E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DA442_05340 44493be539089c7defa2a1660d6d9190 876 SMART SM00437 279 533 1.4E-117 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 DA442_05340 44493be539089c7defa2a1660d6d9190 876 SUPERFAMILY SSF57783 814 870 1.43E-21 T 14-10-2018 DA442_05340 44493be539089c7defa2a1660d6d9190 876 Gene3D G3DSA:3.40.50.140 1 170 1.4E-66 T 14-10-2018 DA442_05340 44493be539089c7defa2a1660d6d9190 876 Pfam PF01131 DNA topoisomerase 164 571 2.0E-127 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DA442_05340 44493be539089c7defa2a1660d6d9190 876 SUPERFAMILY SSF57783 749 812 3.91E-19 T 14-10-2018 DA442_14220 2c92d25d695e5a255fc8ae12d692eb36 475 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 DA442_14220 2c92d25d695e5a255fc8ae12d692eb36 475 SUPERFAMILY SSF51905 3 337 2.67E-56 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_14220 2c92d25d695e5a255fc8ae12d692eb36 475 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 1.8E-35 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 DA442_14220 2c92d25d695e5a255fc8ae12d692eb36 475 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 1.4E-64 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DA442_14220 2c92d25d695e5a255fc8ae12d692eb36 475 Gene3D G3DSA:3.50.50.60 9 332 2.6E-122 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_14220 2c92d25d695e5a255fc8ae12d692eb36 475 Gene3D G3DSA:3.50.50.60 150 271 2.6E-122 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_14220 2c92d25d695e5a255fc8ae12d692eb36 475 Gene3D G3DSA:3.30.390.30 346 467 8.9E-45 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DA442_14220 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 2.4E-68 T 14-10-2018 DA442_14220 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 2.4E-68 T 14-10-2018 DA442_14220 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 2.4E-68 T 14-10-2018 DA442_14220 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 2.4E-68 T 14-10-2018 DA442_14220 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 2.4E-68 T 14-10-2018 DA442_14220 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 2.4E-68 T 14-10-2018 DA442_14220 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 2.4E-68 T 14-10-2018 DA442_14220 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 2.4E-68 T 14-10-2018 DA442_14220 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 2.4E-68 T 14-10-2018 DA442_14220 2c92d25d695e5a255fc8ae12d692eb36 475 SUPERFAMILY SSF55424 343 466 1.17E-38 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DA442_14220 2c92d25d695e5a255fc8ae12d692eb36 475 PIRSF PIRSF000350 1 468 1.8E-82 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 DA442_14220 2c92d25d695e5a255fc8ae12d692eb36 475 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 8 460 2.0E-150 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 DA442_14220 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 7.9E-41 T 14-10-2018 DA442_14220 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 7.9E-41 T 14-10-2018 DA442_14220 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 7.9E-41 T 14-10-2018 DA442_14220 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 7.9E-41 T 14-10-2018 DA442_14220 2c92d25d695e5a255fc8ae12d692eb36 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 7.9E-41 T 14-10-2018 DA442_11990 8953662a66284e7885e6e3c08551a566 278 Pfam PF13847 Methyltransferase domain 87 204 5.8E-16 T 14-10-2018 IPR025714 Methyltransferase domain DA442_11990 8953662a66284e7885e6e3c08551a566 278 Gene3D G3DSA:3.40.50.150 1 273 4.2E-81 T 14-10-2018 DA442_11990 8953662a66284e7885e6e3c08551a566 278 SUPERFAMILY SSF53335 4 258 8.89E-48 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_11990 8953662a66284e7885e6e3c08551a566 278 PIRSF PIRSF018249 1 274 6.6E-88 T 14-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 DA442_03765 dae292dfff2481c84fa78d777d141859 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 285 300 3.0E-17 T 14-10-2018 DA442_03765 dae292dfff2481c84fa78d777d141859 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 300 316 3.0E-17 T 14-10-2018 DA442_03765 dae292dfff2481c84fa78d777d141859 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 3.0E-17 T 14-10-2018 DA442_03765 dae292dfff2481c84fa78d777d141859 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 3.0E-17 T 14-10-2018 DA442_03765 dae292dfff2481c84fa78d777d141859 391 Pfam PF01494 FAD binding domain 4 340 9.9E-24 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 DA442_03765 dae292dfff2481c84fa78d777d141859 391 Gene3D G3DSA:3.50.50.60 5 338 1.1E-95 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_03765 dae292dfff2481c84fa78d777d141859 391 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 390 1.5E-107 T 14-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 DA442_03765 dae292dfff2481c84fa78d777d141859 391 Gene3D G3DSA:3.30.9.50 80 274 1.1E-95 T 14-10-2018 DA442_03765 dae292dfff2481c84fa78d777d141859 391 SUPERFAMILY SSF51905 3 383 2.7E-56 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_11320 04e54a64ca8a6d09101f581663859512 548 Pfam PF02470 MlaD protein 159 219 1.1E-7 T 14-10-2018 IPR003399 Mce/MlaD DA442_11320 04e54a64ca8a6d09101f581663859512 548 Pfam PF02470 MlaD protein 287 391 3.9E-13 T 14-10-2018 IPR003399 Mce/MlaD DA442_11320 04e54a64ca8a6d09101f581663859512 548 Pfam PF02470 MlaD protein 43 134 1.4E-9 T 14-10-2018 IPR003399 Mce/MlaD DA442_17455 d4430f5877f40eb138da9c8be891b659 140 Gene3D G3DSA:1.20.5.440 92 135 2.3E-19 T 14-10-2018 DA442_17455 d4430f5877f40eb138da9c8be891b659 140 Gene3D G3DSA:2.60.15.10 4 91 2.5E-31 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_17455 d4430f5877f40eb138da9c8be891b659 140 SUPERFAMILY SSF51344 5 87 3.79E-24 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_17455 d4430f5877f40eb138da9c8be891b659 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 134 4.0E-12 T 14-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain DA442_17455 d4430f5877f40eb138da9c8be891b659 140 SUPERFAMILY SSF46604 89 138 1.96E-14 T 14-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_17455 d4430f5877f40eb138da9c8be891b659 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 91 8.0E-41 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_17455 d4430f5877f40eb138da9c8be891b659 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 132 20.795 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_17455 d4430f5877f40eb138da9c8be891b659 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 134 7.3E-44 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_17455 d4430f5877f40eb138da9c8be891b659 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 85 8.3E-29 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_13170 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 PIRSF PIRSF000538 4 503 1.6E-177 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DA442_13170 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 5 497 2.1E-226 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 DA442_13170 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 Gene3D G3DSA:3.30.420.40 255 501 3.1E-93 T 14-10-2018 DA442_13170 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 SUPERFAMILY SSF53067 255 497 5.18E-85 T 14-10-2018 DA442_13170 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 SUPERFAMILY SSF53067 5 256 3.05E-94 T 14-10-2018 DA442_13170 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 363 383 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DA442_13170 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 Gene3D G3DSA:3.30.420.40 2 254 4.8E-113 T 14-10-2018 DA442_13170 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 136 148 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DA442_13170 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 451 3.1E-60 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 DA442_13170 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 253 5.4E-86 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 DA442_13170 0c1f24c8a0aa5c6482f8b841e4e0f68a 505 Hamap MF_00186 Glycerol kinase [glpK]. 4 498 58.326 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 DA442_14000 ff7064c1c926669e5f49edbdd92814c5 431 SUPERFAMILY SSF53383 2 423 3.99E-135 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_14000 ff7064c1c926669e5f49edbdd92814c5 431 Gene3D G3DSA:3.90.1150.10 7 419 5.8E-179 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DA442_14000 ff7064c1c926669e5f49edbdd92814c5 431 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 424 1.3E-194 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 DA442_14000 ff7064c1c926669e5f49edbdd92814c5 431 Pfam PF00202 Aminotransferase class-III 33 396 9.2E-77 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DA442_14000 ff7064c1c926669e5f49edbdd92814c5 431 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DA442_14000 ff7064c1c926669e5f49edbdd92814c5 431 Gene3D G3DSA:3.40.640.10 69 317 5.8E-179 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_14000 ff7064c1c926669e5f49edbdd92814c5 431 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 105.446 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 DA442_21920 9a8958359c4fd4b0d5439180062ba66a 677 SUPERFAMILY SSF53474 411 651 1.09E-49 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_21920 9a8958359c4fd4b0d5439180062ba66a 677 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 5 401 1.7E-119 T 14-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 DA442_21920 9a8958359c4fd4b0d5439180062ba66a 677 Pfam PF00326 Prolyl oligopeptidase family 459 673 1.4E-70 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 DA442_21920 9a8958359c4fd4b0d5439180062ba66a 677 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 504 534 - T 14-10-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 DA442_21920 9a8958359c4fd4b0d5439180062ba66a 677 Gene3D G3DSA:3.40.50.1820 12 642 8.6E-246 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_21920 9a8958359c4fd4b0d5439180062ba66a 677 SUPERFAMILY SSF50993 1 408 2.01E-93 T 14-10-2018 DA442_21920 9a8958359c4fd4b0d5439180062ba66a 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 583 598 3.9E-60 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 DA442_21920 9a8958359c4fd4b0d5439180062ba66a 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 443 461 3.9E-60 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 DA442_21920 9a8958359c4fd4b0d5439180062ba66a 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 469 493 3.9E-60 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 DA442_21920 9a8958359c4fd4b0d5439180062ba66a 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 497 516 3.9E-60 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 DA442_21920 9a8958359c4fd4b0d5439180062ba66a 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 527 547 3.9E-60 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 DA442_21920 9a8958359c4fd4b0d5439180062ba66a 677 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 602 624 3.9E-60 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 DA442_21920 9a8958359c4fd4b0d5439180062ba66a 677 Gene3D G3DSA:2.130.10.120 70 403 8.6E-246 T 14-10-2018 DA442_02495 f27d74202d1fb786305c0da27c7ca518 581 Pfam PF08448 PAS fold 285 395 1.5E-13 T 14-10-2018 IPR013656 PAS fold-4 DA442_02495 f27d74202d1fb786305c0da27c7ca518 581 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 276 401 2.4E-14 T 14-10-2018 IPR000014 PAS domain DA442_02495 f27d74202d1fb786305c0da27c7ca518 581 SMART SM00267 401 577 9.4E-65 T 14-10-2018 IPR000160 GGDEF domain DA442_02495 f27d74202d1fb786305c0da27c7ca518 581 SUPERFAMILY SSF55073 417 577 4.39E-47 T 14-10-2018 IPR029787 Nucleotide cyclase DA442_02495 f27d74202d1fb786305c0da27c7ca518 581 Gene3D G3DSA:3.30.70.270 414 580 2.7E-52 T 14-10-2018 DA442_02495 f27d74202d1fb786305c0da27c7ca518 581 Gene3D G3DSA:3.30.450.20 145 259 1.9E-7 T 14-10-2018 DA442_02495 f27d74202d1fb786305c0da27c7ca518 581 Pfam PF13188 PAS domain 40 78 4.8E-4 T 14-10-2018 IPR000014 PAS domain DA442_02495 f27d74202d1fb786305c0da27c7ca518 581 Gene3D G3DSA:3.30.450.20 264 407 6.2E-23 T 14-10-2018 DA442_02495 f27d74202d1fb786305c0da27c7ca518 581 SUPERFAMILY SSF55785 150 251 9.95E-7 T 14-10-2018 IPR035965 PAS domain superfamily DA442_02495 f27d74202d1fb786305c0da27c7ca518 581 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 408 575 5.3E-48 T 14-10-2018 IPR000160 GGDEF domain DA442_02495 f27d74202d1fb786305c0da27c7ca518 581 SUPERFAMILY SSF55785 266 392 1.24E-18 T 14-10-2018 IPR035965 PAS domain superfamily DA442_02495 f27d74202d1fb786305c0da27c7ca518 581 SMART SM00091 158 223 22.0 T 14-10-2018 IPR000014 PAS domain DA442_02495 f27d74202d1fb786305c0da27c7ca518 581 SMART SM00091 38 108 28.0 T 14-10-2018 IPR000014 PAS domain DA442_02495 f27d74202d1fb786305c0da27c7ca518 581 SMART SM00091 279 346 0.075 T 14-10-2018 IPR000014 PAS domain DA442_02495 f27d74202d1fb786305c0da27c7ca518 581 Pfam PF00990 Diguanylate cyclase, GGDEF domain 413 573 1.2E-49 T 14-10-2018 IPR000160 GGDEF domain DA442_00250 c5975a5b5577af6678d0afb72dc5f980 571 SMART SM00382 338 534 1.7E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_00250 c5975a5b5577af6678d0afb72dc5f980 571 SMART SM00382 32 231 2.3E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_00250 c5975a5b5577af6678d0afb72dc5f980 571 ProSitePatterns PS00211 ABC transporters family signature. 455 469 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_00250 c5975a5b5577af6678d0afb72dc5f980 571 Pfam PF00005 ABC transporter 24 181 6.6E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_00250 c5975a5b5577af6678d0afb72dc5f980 571 SUPERFAMILY SSF52540 3 253 5.1E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_00250 c5975a5b5577af6678d0afb72dc5f980 571 Gene3D G3DSA:3.40.50.300 1 295 3.0E-87 T 14-10-2018 DA442_00250 c5975a5b5577af6678d0afb72dc5f980 571 Gene3D G3DSA:3.40.50.300 301 571 1.0E-86 T 14-10-2018 DA442_00250 c5975a5b5577af6678d0afb72dc5f980 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 534 566 8.3E-4 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DA442_00250 c5975a5b5577af6678d0afb72dc5f980 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 271 4.2E-8 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DA442_00250 c5975a5b5577af6678d0afb72dc5f980 571 Pfam PF00005 ABC transporter 330 483 4.5E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_00250 c5975a5b5577af6678d0afb72dc5f980 571 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_00250 c5975a5b5577af6678d0afb72dc5f980 571 SUPERFAMILY SSF52540 304 553 6.5E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_23555 4861aff9813851f2df47ef38d25131da 236 Gene3D G3DSA:3.30.420.10 45 226 6.7E-33 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DA442_23555 4861aff9813851f2df47ef38d25131da 236 SUPERFAMILY SSF53098 44 226 2.16E-36 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DA442_23555 4861aff9813851f2df47ef38d25131da 236 Pfam PF00929 Exonuclease 53 216 6.0E-17 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DA442_23555 4861aff9813851f2df47ef38d25131da 236 SMART SM00479 51 225 1.4E-20 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DA442_05355 933a7cc1f0ef6a53d08952ef5b2afa51 267 PRINTS PR00412 Epoxide hydrolase signature 24 42 1.5E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 DA442_05355 933a7cc1f0ef6a53d08952ef5b2afa51 267 PRINTS PR00412 Epoxide hydrolase signature 237 259 1.5E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 DA442_05355 933a7cc1f0ef6a53d08952ef5b2afa51 267 PRINTS PR00412 Epoxide hydrolase signature 205 221 1.5E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 DA442_05355 933a7cc1f0ef6a53d08952ef5b2afa51 267 Gene3D G3DSA:3.40.50.1820 7 265 1.8E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_05355 933a7cc1f0ef6a53d08952ef5b2afa51 267 SUPERFAMILY SSF53474 15 260 1.85E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_05355 933a7cc1f0ef6a53d08952ef5b2afa51 267 Pfam PF00561 alpha/beta hydrolase fold 19 121 6.8E-22 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DA442_20920 bdd4e620740300178fa0c8e90cba8775 206 Pfam PF01810 LysE type translocator 15 204 4.1E-27 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DA442_20920 bdd4e620740300178fa0c8e90cba8775 206 PIRSF PIRSF006324 1 206 2.8E-44 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DA442_14470 d50e298bcd539d6ff31dad065c743d80 347 Gene3D G3DSA:3.30.2350.20 18 337 1.7E-106 T 14-10-2018 DA442_14470 d50e298bcd539d6ff31dad065c743d80 347 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 9 225 4.3E-54 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_14470 d50e298bcd539d6ff31dad065c743d80 347 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 78 91 - T 14-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 DA442_14470 d50e298bcd539d6ff31dad065c743d80 347 SUPERFAMILY SSF55120 6 339 5.04E-98 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_14470 d50e298bcd539d6ff31dad065c743d80 347 Gene3D G3DSA:3.30.2340.10 170 302 1.7E-106 T 14-10-2018 DA442_14470 d50e298bcd539d6ff31dad065c743d80 347 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 6 342 28.887 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_14470 d50e298bcd539d6ff31dad065c743d80 347 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 9 170 3.6E-42 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_14470 d50e298bcd539d6ff31dad065c743d80 347 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 187 337 6.6E-22 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_12980 f1cfeba2351e3708a953a03ba9cc7590 385 Pfam PF05175 Methyltransferase small domain 200 373 1.7E-55 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 DA442_12980 f1cfeba2351e3708a953a03ba9cc7590 385 Pfam PF08468 Methyltransferase small domain N-terminal 48 165 3.0E-5 T 14-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 DA442_12980 f1cfeba2351e3708a953a03ba9cc7590 385 Gene3D G3DSA:3.40.50.150 187 381 6.9E-47 T 14-10-2018 DA442_12980 f1cfeba2351e3708a953a03ba9cc7590 385 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 2 376 48.772 T 14-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 DA442_12980 f1cfeba2351e3708a953a03ba9cc7590 385 SUPERFAMILY SSF53335 193 370 1.88E-27 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_12980 f1cfeba2351e3708a953a03ba9cc7590 385 PIRSF PIRSF037565 1 377 7.9E-173 T 14-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 DA442_12980 f1cfeba2351e3708a953a03ba9cc7590 385 Gene3D G3DSA:3.40.50.150 8 182 1.9E-51 T 14-10-2018 DA442_12010 6d867259de70575cbef7579d5c241844 525 Pfam PF00245 Alkaline phosphatase 26 503 5.8E-83 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 DA442_12010 6d867259de70575cbef7579d5c241844 525 PRINTS PR00113 Alkaline phosphatase signature 122 142 2.7E-37 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 DA442_12010 6d867259de70575cbef7579d5c241844 525 PRINTS PR00113 Alkaline phosphatase signature 26 46 2.7E-37 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 DA442_12010 6d867259de70575cbef7579d5c241844 525 PRINTS PR00113 Alkaline phosphatase signature 267 296 2.7E-37 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 DA442_12010 6d867259de70575cbef7579d5c241844 525 PRINTS PR00113 Alkaline phosphatase signature 166 176 2.7E-37 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 DA442_12010 6d867259de70575cbef7579d5c241844 525 PRINTS PR00113 Alkaline phosphatase signature 85 100 2.7E-37 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 DA442_12010 6d867259de70575cbef7579d5c241844 525 SMART SM00098 27 437 1.1E-53 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 DA442_12010 6d867259de70575cbef7579d5c241844 525 Gene3D G3DSA:3.40.720.10 24 379 3.1E-139 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DA442_12010 6d867259de70575cbef7579d5c241844 525 Gene3D G3DSA:3.40.720.10 462 525 2.5E-7 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DA442_12010 6d867259de70575cbef7579d5c241844 525 SUPERFAMILY SSF53649 9 505 5.76E-113 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DA442_12010 6d867259de70575cbef7579d5c241844 525 ProSitePatterns PS00123 Alkaline phosphatase active site. 85 93 - T 14-10-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 DA442_12010 6d867259de70575cbef7579d5c241844 525 Gene3D G3DSA:1.10.1200.140 388 445 2.3E-27 T 14-10-2018 DA442_21465 46bc6ae7fc410c46fbfbb747b8ad8213 177 Pfam PF10531 SLBB domain 105 158 2.5E-16 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DA442_21465 46bc6ae7fc410c46fbfbb747b8ad8213 177 Gene3D G3DSA:3.30.1950.10 31 103 3.3E-22 T 14-10-2018 DA442_21465 46bc6ae7fc410c46fbfbb747b8ad8213 177 Pfam PF02563 Polysaccharide biosynthesis/export protein 24 99 6.8E-18 T 14-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 DA442_21465 46bc6ae7fc410c46fbfbb747b8ad8213 177 SUPERFAMILY SSF142984 103 139 7.19E-5 T 14-10-2018 DA442_21465 46bc6ae7fc410c46fbfbb747b8ad8213 177 Gene3D G3DSA:3.10.560.10 20 168 3.3E-22 T 14-10-2018 DA442_14800 727089e41690eead45eb5b1ed734ea24 200 Gene3D G3DSA:3.90.950.10 1 198 1.6E-83 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DA442_14800 727089e41690eead45eb5b1ed734ea24 200 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 194 1.8E-65 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 DA442_14800 727089e41690eead45eb5b1ed734ea24 200 Pfam PF01725 Ham1 family 4 191 4.4E-58 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 DA442_14800 727089e41690eead45eb5b1ed734ea24 200 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 196 51.144 T 14-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 DA442_14800 727089e41690eead45eb5b1ed734ea24 200 SUPERFAMILY SSF52972 1 194 4.97E-74 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DA442_03535 4135665ad58361fc45e960483aa499ad 253 Pfam PF01618 MotA/TolQ/ExbB proton channel family 99 213 6.0E-22 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel DA442_03535 4135665ad58361fc45e960483aa499ad 253 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 182 199 - T 14-10-2018 IPR000540 Flagellar motor protein MotA, conserved site DA442_06165 a4747f0f7650bb18385c9fd1928aa435 562 SMART SM00387 446 557 2.8E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_06165 a4747f0f7650bb18385c9fd1928aa435 562 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 447 555 7.6E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_06165 a4747f0f7650bb18385c9fd1928aa435 562 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 554 9.2E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_06165 a4747f0f7650bb18385c9fd1928aa435 562 PRINTS PR00344 Bacterial sensor protein C-terminal signature 517 535 9.2E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_06165 a4747f0f7650bb18385c9fd1928aa435 562 PRINTS PR00344 Bacterial sensor protein C-terminal signature 506 516 9.2E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_06165 a4747f0f7650bb18385c9fd1928aa435 562 PRINTS PR00344 Bacterial sensor protein C-terminal signature 489 503 9.2E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_06165 a4747f0f7650bb18385c9fd1928aa435 562 Gene3D G3DSA:3.30.565.10 403 562 1.5E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_06165 a4747f0f7650bb18385c9fd1928aa435 562 Gene3D G3DSA:3.40.190.10 85 205 4.7E-18 T 14-10-2018 DA442_06165 a4747f0f7650bb18385c9fd1928aa435 562 SMART SM00388 335 404 4.5E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_06165 a4747f0f7650bb18385c9fd1928aa435 562 Pfam PF00512 His Kinase A (phospho-acceptor) domain 337 398 1.5E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_06165 a4747f0f7650bb18385c9fd1928aa435 562 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 8 242 9.4E-34 T 14-10-2018 DA442_06165 a4747f0f7650bb18385c9fd1928aa435 562 SUPERFAMILY SSF55874 390 555 1.31E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_06165 a4747f0f7650bb18385c9fd1928aa435 562 Gene3D G3DSA:3.40.190.10 10 233 4.7E-18 T 14-10-2018 DA442_06165 a4747f0f7650bb18385c9fd1928aa435 562 SUPERFAMILY SSF47384 327 398 3.53E-9 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DA442_06165 a4747f0f7650bb18385c9fd1928aa435 562 Gene3D G3DSA:1.10.287.130 341 401 1.4E-16 T 14-10-2018 DA442_06165 a4747f0f7650bb18385c9fd1928aa435 562 SUPERFAMILY SSF53850 14 238 7.65E-16 T 14-10-2018 DA442_11970 4a4095cb9971688ec67ffa7e8b18fc73 147 SUPERFAMILY SSF51316 19 146 4.08E-59 T 14-10-2018 IPR011057 Mss4-like superfamily DA442_11970 4a4095cb9971688ec67ffa7e8b18fc73 147 Pfam PF01641 SelR domain 25 143 5.0E-54 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 DA442_11970 4a4095cb9971688ec67ffa7e8b18fc73 147 Gene3D G3DSA:2.170.150.20 3 147 1.8E-61 T 14-10-2018 DA442_11970 4a4095cb9971688ec67ffa7e8b18fc73 147 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 22 145 37.616 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 DA442_11970 4a4095cb9971688ec67ffa7e8b18fc73 147 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 21 145 1.2E-57 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 DA442_10990 2f7ac4df8b19b4c386c13dea0d7667a3 312 Pfam PF00849 RNA pseudouridylate synthase 68 200 5.0E-17 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_10990 2f7ac4df8b19b4c386c13dea0d7667a3 312 Pfam PF01479 S4 domain 4 43 4.2E-11 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_10990 2f7ac4df8b19b4c386c13dea0d7667a3 312 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 72 232 7.2E-55 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 DA442_10990 2f7ac4df8b19b4c386c13dea0d7667a3 312 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 106 120 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 DA442_10990 2f7ac4df8b19b4c386c13dea0d7667a3 312 Gene3D G3DSA:3.30.70.1560 130 220 3.6E-49 T 14-10-2018 DA442_10990 2f7ac4df8b19b4c386c13dea0d7667a3 312 SMART SM00363 3 61 3.2E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_10990 2f7ac4df8b19b4c386c13dea0d7667a3 312 Gene3D G3DSA:3.10.290.10 1 59 2.3E-20 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DA442_10990 2f7ac4df8b19b4c386c13dea0d7667a3 312 Gene3D G3DSA:3.30.70.580 70 228 3.6E-49 T 14-10-2018 DA442_10990 2f7ac4df8b19b4c386c13dea0d7667a3 312 SUPERFAMILY SSF55174 4 96 5.72E-12 T 14-10-2018 DA442_10990 2f7ac4df8b19b4c386c13dea0d7667a3 312 SUPERFAMILY SSF55120 68 237 1.3E-42 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_14080 e11401aaf3539ec9dd9d858ac869a200 541 Gene3D G3DSA:1.10.3720.10 285 540 3.8E-35 T 14-10-2018 IPR035906 MetI-like superfamily DA442_14080 e11401aaf3539ec9dd9d858ac869a200 541 Gene3D G3DSA:1.10.3720.10 11 267 5.4E-53 T 14-10-2018 IPR035906 MetI-like superfamily DA442_14080 e11401aaf3539ec9dd9d858ac869a200 541 SUPERFAMILY SSF161098 8 257 9.94E-44 T 14-10-2018 IPR035906 MetI-like superfamily DA442_14080 e11401aaf3539ec9dd9d858ac869a200 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 68 254 1.1E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DA442_14080 e11401aaf3539ec9dd9d858ac869a200 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 342 532 6.9E-7 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DA442_14080 e11401aaf3539ec9dd9d858ac869a200 541 SUPERFAMILY SSF161098 282 535 6.15E-39 T 14-10-2018 IPR035906 MetI-like superfamily DA442_15975 262bf7b77308233887537f73d64868b5 669 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 212 329 8.0E-40 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 DA442_15975 262bf7b77308233887537f73d64868b5 669 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 14-10-2018 IPR014762 DNA mismatch repair, conserved site DA442_15975 262bf7b77308233887537f73d64868b5 669 Gene3D G3DSA:2.30.42.20 483 665 6.9E-56 T 14-10-2018 DA442_15975 262bf7b77308233887537f73d64868b5 669 Gene3D G3DSA:3.30.565.10 1 216 2.4E-71 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_15975 262bf7b77308233887537f73d64868b5 669 Gene3D G3DSA:3.30.230.10 217 329 1.7E-39 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DA442_15975 262bf7b77308233887537f73d64868b5 669 Pfam PF08676 MutL C terminal dimerisation domain 483 623 2.3E-30 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 DA442_15975 262bf7b77308233887537f73d64868b5 669 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 118 3.4E-11 T 14-10-2018 DA442_15975 262bf7b77308233887537f73d64868b5 669 SUPERFAMILY SSF118116 483 668 3.01E-39 T 14-10-2018 IPR037198 MutL, C-terminal domain superfamily DA442_15975 262bf7b77308233887537f73d64868b5 669 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 3.2E-103 T 14-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 DA442_15975 262bf7b77308233887537f73d64868b5 669 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 667 25.289 T 14-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 DA442_15975 262bf7b77308233887537f73d64868b5 669 SUPERFAMILY SSF54211 191 330 2.31E-38 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DA442_15975 262bf7b77308233887537f73d64868b5 669 SUPERFAMILY SSF55874 1 207 9.3E-54 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_15975 262bf7b77308233887537f73d64868b5 669 SMART SM00853 486 629 5.1E-17 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 DA442_15975 262bf7b77308233887537f73d64868b5 669 Gene3D G3DSA:3.30.1370.100 527 621 6.9E-56 T 14-10-2018 DA442_15975 262bf7b77308233887537f73d64868b5 669 SMART SM01340 212 330 3.5E-59 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 DA442_03155 cc788643dfafa1609fb4c346df6e0dc1 372 SUPERFAMILY SSF56014 265 354 4.3E-11 T 14-10-2018 DA442_03155 cc788643dfafa1609fb4c346df6e0dc1 372 PIRSF PIRSF004640 1 364 1.9E-147 T 14-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 DA442_03155 cc788643dfafa1609fb4c346df6e0dc1 372 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 359 35.147 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 DA442_03155 cc788643dfafa1609fb4c346df6e0dc1 372 SUPERFAMILY SSF51717 15 208 7.3E-11 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DA442_03155 cc788643dfafa1609fb4c346df6e0dc1 372 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 351 7.6E-127 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 DA442_03155 cc788643dfafa1609fb4c346df6e0dc1 372 Pfam PF04551 GcpE protein 14 354 2.9E-132 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 DA442_03155 cc788643dfafa1609fb4c346df6e0dc1 372 Gene3D G3DSA:3.20.20.20 1 261 1.0E-104 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DA442_03155 cc788643dfafa1609fb4c346df6e0dc1 372 Gene3D G3DSA:3.30.413.10 262 361 8.4E-25 T 14-10-2018 DA442_04200 74b1d0519195e0bba52dc847cafaf61a 316 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 180 307 1.7E-45 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 DA442_04200 74b1d0519195e0bba52dc847cafaf61a 316 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 3 308 1.8E-86 T 14-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 DA442_04200 74b1d0519195e0bba52dc847cafaf61a 316 SUPERFAMILY SSF64383 180 312 1.96E-48 T 14-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 DA442_04200 74b1d0519195e0bba52dc847cafaf61a 316 Hamap MF_00509 Cell division protein ZipA [zipA]. 2 310 22.594 T 14-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 DA442_04200 74b1d0519195e0bba52dc847cafaf61a 316 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 182 316 1.0E-76 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 DA442_04200 74b1d0519195e0bba52dc847cafaf61a 316 SMART SM00771 178 308 5.1E-72 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 DA442_04200 74b1d0519195e0bba52dc847cafaf61a 316 Gene3D G3DSA:3.30.1400.10 177 316 7.2E-49 T 14-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 DA442_06215 305d53c8649a4aaae0710d3f8fa002aa 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 426 3.7E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_06215 305d53c8649a4aaae0710d3f8fa002aa 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 391 3.7E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_06215 305d53c8649a4aaae0710d3f8fa002aa 449 SUPERFAMILY SSF47384 224 289 1.14E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DA442_06215 305d53c8649a4aaae0710d3f8fa002aa 449 SUPERFAMILY SSF55874 308 444 1.31E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_06215 305d53c8649a4aaae0710d3f8fa002aa 449 SMART SM00387 342 448 1.7E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_06215 305d53c8649a4aaae0710d3f8fa002aa 449 Gene3D G3DSA:1.10.287.130 190 292 4.1E-8 T 14-10-2018 DA442_06215 305d53c8649a4aaae0710d3f8fa002aa 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 345 445 9.9E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_06215 305d53c8649a4aaae0710d3f8fa002aa 449 Gene3D G3DSA:3.30.565.10 309 448 5.8E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_07925 cf4e233e9a205f25c12b1792063cc00f 228 SUPERFAMILY SSF52540 23 198 1.06E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_07925 cf4e233e9a205f25c12b1792063cc00f 228 Gene3D G3DSA:3.40.50.300 3 195 6.7E-28 T 14-10-2018 DA442_25775 9951a59930ae2210854603e35a228109 606 SMART SM00267 166 330 3.6E-25 T 14-10-2018 IPR000160 GGDEF domain DA442_25775 9951a59930ae2210854603e35a228109 606 SUPERFAMILY SSF55781 22 149 4.05E-5 T 14-10-2018 DA442_25775 9951a59930ae2210854603e35a228109 606 Pfam PF00990 Diguanylate cyclase, GGDEF domain 178 324 2.3E-27 T 14-10-2018 IPR000160 GGDEF domain DA442_25775 9951a59930ae2210854603e35a228109 606 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 177 329 1.6E-25 T 14-10-2018 IPR000160 GGDEF domain DA442_25775 9951a59930ae2210854603e35a228109 606 SMART SM00052 345 593 2.2E-78 T 14-10-2018 IPR001633 EAL domain DA442_25775 9951a59930ae2210854603e35a228109 606 Pfam PF00563 EAL domain 353 588 1.6E-62 T 14-10-2018 IPR001633 EAL domain DA442_25775 9951a59930ae2210854603e35a228109 606 SUPERFAMILY SSF141868 358 601 3.14E-73 T 14-10-2018 IPR035919 EAL domain superfamily DA442_25775 9951a59930ae2210854603e35a228109 606 SUPERFAMILY SSF55073 182 332 9.42E-31 T 14-10-2018 IPR029787 Nucleotide cyclase DA442_25775 9951a59930ae2210854603e35a228109 606 Gene3D G3DSA:3.30.70.270 171 344 2.2E-35 T 14-10-2018 DA442_25775 9951a59930ae2210854603e35a228109 606 Gene3D G3DSA:3.20.20.450 345 605 1.0E-75 T 14-10-2018 IPR035919 EAL domain superfamily DA442_00385 40966a94af634b637e560ba394fbab0f 259 Gene3D G3DSA:3.40.1630.10 1 56 8.8E-21 T 14-10-2018 DA442_00385 40966a94af634b637e560ba394fbab0f 259 Gene3D G3DSA:3.40.50.150 57 259 1.0E-74 T 14-10-2018 DA442_00385 40966a94af634b637e560ba394fbab0f 259 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 256 38.816 T 14-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 DA442_00385 40966a94af634b637e560ba394fbab0f 259 Pfam PF04445 Putative SAM-dependent methyltransferase 19 255 1.3E-106 T 14-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 DA442_00385 40966a94af634b637e560ba394fbab0f 259 SUPERFAMILY SSF53335 4 255 2.11E-74 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_21480 05414f258a49021de7568c4d050bcf36 351 Gene3D G3DSA:3.40.50.2000 45 336 2.4E-57 T 14-10-2018 DA442_21480 05414f258a49021de7568c4d050bcf36 351 Pfam PF00534 Glycosyl transferases group 1 179 323 1.2E-33 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 DA442_21480 05414f258a49021de7568c4d050bcf36 351 SUPERFAMILY SSF53756 2 348 1.22E-68 T 14-10-2018 DA442_21480 05414f258a49021de7568c4d050bcf36 351 Gene3D G3DSA:3.40.50.2000 158 331 2.4E-57 T 14-10-2018 DA442_21480 05414f258a49021de7568c4d050bcf36 351 Pfam PF13439 Glycosyltransferase Family 4 66 162 1.5E-11 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DA442_13410 96da846fbb392864a5b9dfd6ba38410a 442 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 3 427 2.9E-214 T 14-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 DA442_13410 96da846fbb392864a5b9dfd6ba38410a 442 SUPERFAMILY SSF54680 337 437 7.72E-29 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DA442_13410 96da846fbb392864a5b9dfd6ba38410a 442 SUPERFAMILY SSF52418 73 334 1.7E-88 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 DA442_13410 96da846fbb392864a5b9dfd6ba38410a 442 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 1.1E-159 T 14-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 DA442_13410 96da846fbb392864a5b9dfd6ba38410a 442 Gene3D G3DSA:1.20.970.10 4 67 4.1E-25 T 14-10-2018 DA442_13410 96da846fbb392864a5b9dfd6ba38410a 442 Gene3D G3DSA:3.90.1170.30 340 432 1.3E-29 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DA442_13410 96da846fbb392864a5b9dfd6ba38410a 442 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 14-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DA442_13410 96da846fbb392864a5b9dfd6ba38410a 442 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 350 423 1.0E-23 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DA442_13410 96da846fbb392864a5b9dfd6ba38410a 442 Hamap MF_01628 Thymidine phosphorylase [deoA]. 2 437 45.476 T 14-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 DA442_13410 96da846fbb392864a5b9dfd6ba38410a 442 Gene3D G3DSA:3.40.1030.10 70 339 6.3E-100 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 DA442_13410 96da846fbb392864a5b9dfd6ba38410a 442 PIRSF PIRSF000478 1 438 7.1E-149 T 14-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DA442_13410 96da846fbb392864a5b9dfd6ba38410a 442 SUPERFAMILY SSF47648 2 70 1.14E-21 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 DA442_13410 96da846fbb392864a5b9dfd6ba38410a 442 Pfam PF00591 Glycosyl transferase family, a/b domain 80 309 1.0E-48 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DA442_13410 96da846fbb392864a5b9dfd6ba38410a 442 SMART SM00941 350 424 2.3E-28 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DA442_13410 96da846fbb392864a5b9dfd6ba38410a 442 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 3.5E-21 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 DA442_05615 15664d7a9b6660359548436d01fd6caf 379 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 291 6.9E-18 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DA442_05615 15664d7a9b6660359548436d01fd6caf 379 SUPERFAMILY SSF111369 51 297 1.96E-81 T 14-10-2018 DA442_05615 15664d7a9b6660359548436d01fd6caf 379 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 373 1.4E-84 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DA442_05615 15664d7a9b6660359548436d01fd6caf 379 Gene3D G3DSA:1.10.287.470 98 171 1.2E-108 T 14-10-2018 DA442_05615 15664d7a9b6660359548436d01fd6caf 379 Gene3D G3DSA:2.40.50.100 63 207 1.2E-108 T 14-10-2018 DA442_05615 15664d7a9b6660359548436d01fd6caf 379 Gene3D G3DSA:2.40.30.170 51 301 1.2E-108 T 14-10-2018 DA442_05615 15664d7a9b6660359548436d01fd6caf 379 Gene3D G3DSA:2.40.420.20 302 371 1.2E-108 T 14-10-2018 DA442_01860 7879d00e5b68cebf9b244af1f5d3aaf5 515 Gene3D G3DSA:1.10.238.260 280 393 4.3E-32 T 14-10-2018 DA442_01860 7879d00e5b68cebf9b244af1f5d3aaf5 515 Gene3D G3DSA:3.30.160.270 394 500 1.3E-6 T 14-10-2018 DA442_01860 7879d00e5b68cebf9b244af1f5d3aaf5 515 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 496 1.4E-237 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DA442_01860 7879d00e5b68cebf9b244af1f5d3aaf5 515 SUPERFAMILY SSF110921 393 498 3.01E-20 T 14-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DA442_01860 7879d00e5b68cebf9b244af1f5d3aaf5 515 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DA442_01860 7879d00e5b68cebf9b244af1f5d3aaf5 515 Pfam PF00682 HMGL-like 4 273 1.3E-100 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 DA442_01860 7879d00e5b68cebf9b244af1f5d3aaf5 515 SUPERFAMILY SSF51569 1 291 1.01E-100 T 14-10-2018 DA442_01860 7879d00e5b68cebf9b244af1f5d3aaf5 515 Gene3D G3DSA:3.20.20.70 1 277 2.2E-107 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_01860 7879d00e5b68cebf9b244af1f5d3aaf5 515 SMART SM00917 369 499 2.0E-26 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DA442_01860 7879d00e5b68cebf9b244af1f5d3aaf5 515 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 508 42.364 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DA442_01860 7879d00e5b68cebf9b244af1f5d3aaf5 515 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DA442_01860 7879d00e5b68cebf9b244af1f5d3aaf5 515 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 498 1.4E-29 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DA442_08520 8b236b42d2aaf8262eb22082e06adad0 2587 SUPERFAMILY SSF141072 1277 1381 8.37E-8 T 14-10-2018 IPR038081 CalX-like domain superfamily DA442_08520 8b236b42d2aaf8262eb22082e06adad0 2587 SUPERFAMILY SSF141072 545 647 8.24E-8 T 14-10-2018 IPR038081 CalX-like domain superfamily DA442_08520 8b236b42d2aaf8262eb22082e06adad0 2587 Pfam PF03160 Calx-beta domain 1632 1719 0.11 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 DA442_08520 8b236b42d2aaf8262eb22082e06adad0 2587 Pfam PF03160 Calx-beta domain 412 499 0.089 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 DA442_08520 8b236b42d2aaf8262eb22082e06adad0 2587 Pfam PF03160 Calx-beta domain 900 987 0.11 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 DA442_08520 8b236b42d2aaf8262eb22082e06adad0 2587 Pfam PF03160 Calx-beta domain 1266 1353 0.11 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 DA442_08520 8b236b42d2aaf8262eb22082e06adad0 2587 Pfam PF03160 Calx-beta domain 1144 1231 0.16 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 DA442_08520 8b236b42d2aaf8262eb22082e06adad0 2587 Pfam PF03160 Calx-beta domain 534 621 0.11 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 DA442_08520 8b236b42d2aaf8262eb22082e06adad0 2587 Pfam PF03160 Calx-beta domain 1510 1597 0.11 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 DA442_08520 8b236b42d2aaf8262eb22082e06adad0 2587 Pfam PF03160 Calx-beta domain 165 233 0.83 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 DA442_08520 8b236b42d2aaf8262eb22082e06adad0 2587 Pfam PF03160 Calx-beta domain 656 743 0.082 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 DA442_08520 8b236b42d2aaf8262eb22082e06adad0 2587 Pfam PF03160 Calx-beta domain 1998 2084 1.8 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 DA442_08520 8b236b42d2aaf8262eb22082e06adad0 2587 Pfam PF03160 Calx-beta domain 1022 1109 0.11 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 DA442_08520 8b236b42d2aaf8262eb22082e06adad0 2587 Pfam PF03160 Calx-beta domain 290 377 0.13 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 DA442_08520 8b236b42d2aaf8262eb22082e06adad0 2587 Pfam PF03160 Calx-beta domain 1876 1963 0.46 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 DA442_08520 8b236b42d2aaf8262eb22082e06adad0 2587 Pfam PF03160 Calx-beta domain 1388 1475 0.11 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 DA442_08520 8b236b42d2aaf8262eb22082e06adad0 2587 Pfam PF03160 Calx-beta domain 778 865 0.11 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 DA442_08520 8b236b42d2aaf8262eb22082e06adad0 2587 Pfam PF03160 Calx-beta domain 1754 1841 0.11 T 14-10-2018 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 DA442_08520 8b236b42d2aaf8262eb22082e06adad0 2587 SUPERFAMILY SSF141072 1520 1624 5.49E-8 T 14-10-2018 IPR038081 CalX-like domain superfamily DA442_08520 8b236b42d2aaf8262eb22082e06adad0 2587 SUPERFAMILY SSF141072 1643 1747 8.37E-8 T 14-10-2018 IPR038081 CalX-like domain superfamily DA442_08520 8b236b42d2aaf8262eb22082e06adad0 2587 SUPERFAMILY SSF141072 789 891 8.24E-8 T 14-10-2018 IPR038081 CalX-like domain superfamily DA442_08520 8b236b42d2aaf8262eb22082e06adad0 2587 SUPERFAMILY SSF141072 1399 1503 8.37E-8 T 14-10-2018 IPR038081 CalX-like domain superfamily DA442_08520 8b236b42d2aaf8262eb22082e06adad0 2587 SUPERFAMILY SSF141072 1764 1868 5.49E-8 T 14-10-2018 IPR038081 CalX-like domain superfamily DA442_08520 8b236b42d2aaf8262eb22082e06adad0 2587 SUPERFAMILY SSF141072 2009 2117 5.62E-8 T 14-10-2018 IPR038081 CalX-like domain superfamily DA442_08520 8b236b42d2aaf8262eb22082e06adad0 2587 SUPERFAMILY SSF141072 1033 1135 8.24E-8 T 14-10-2018 IPR038081 CalX-like domain superfamily DA442_08520 8b236b42d2aaf8262eb22082e06adad0 2587 SUPERFAMILY SSF51120 2438 2527 1.46E-13 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DA442_08520 8b236b42d2aaf8262eb22082e06adad0 2587 SUPERFAMILY SSF141072 667 770 4.45E-8 T 14-10-2018 IPR038081 CalX-like domain superfamily DA442_08520 8b236b42d2aaf8262eb22082e06adad0 2587 SUPERFAMILY SSF141072 159 283 7.98E-9 T 14-10-2018 IPR038081 CalX-like domain superfamily DA442_08520 8b236b42d2aaf8262eb22082e06adad0 2587 Gene3D G3DSA:2.150.10.10 2435 2574 6.9E-14 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DA442_08520 8b236b42d2aaf8262eb22082e06adad0 2587 SUPERFAMILY SSF141072 423 525 1.7E-7 T 14-10-2018 IPR038081 CalX-like domain superfamily DA442_08520 8b236b42d2aaf8262eb22082e06adad0 2587 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2466 2484 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site DA442_08520 8b236b42d2aaf8262eb22082e06adad0 2587 SUPERFAMILY SSF141072 911 1013 8.24E-8 T 14-10-2018 IPR038081 CalX-like domain superfamily DA442_08520 8b236b42d2aaf8262eb22082e06adad0 2587 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2457 2475 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site DA442_08520 8b236b42d2aaf8262eb22082e06adad0 2587 SUPERFAMILY SSF141072 301 403 5.89E-8 T 14-10-2018 IPR038081 CalX-like domain superfamily DA442_08520 8b236b42d2aaf8262eb22082e06adad0 2587 SUPERFAMILY SSF141072 1887 1989 3.14E-7 T 14-10-2018 IPR038081 CalX-like domain superfamily DA442_08520 8b236b42d2aaf8262eb22082e06adad0 2587 SUPERFAMILY SSF141072 1155 1259 1.96E-7 T 14-10-2018 IPR038081 CalX-like domain superfamily DA442_05965 555bcee78a2dc77382ef0913578fe602 394 PIRSF PIRSF000014 1 394 1.5E-158 T 14-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 DA442_05965 555bcee78a2dc77382ef0913578fe602 394 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 16 186 4.3E-71 T 14-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal DA442_05965 555bcee78a2dc77382ef0913578fe602 394 Gene3D G3DSA:1.10.3820.10 15 192 4.4E-38 T 14-10-2018 IPR038266 NapC/NirT cytochrome c superfamily DA442_05965 555bcee78a2dc77382ef0913578fe602 394 SUPERFAMILY SSF48695 12 187 7.18E-59 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily DA442_05965 555bcee78a2dc77382ef0913578fe602 394 TIGRFAM TIGR02162 torC: trimethylamine-N-oxide reductase c-type cytochrome TorC 7 394 3.0E-186 T 14-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 DA442_05965 555bcee78a2dc77382ef0913578fe602 394 SUPERFAMILY SSF46626 307 386 6.92E-5 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_25480 0a5a84c909fe714a211cb025ee268d4a 76 Pfam PF09016 Pas factor saposin fold 1 76 1.5E-45 T 14-10-2018 IPR015106 Pas factor saposin domain DA442_25480 0a5a84c909fe714a211cb025ee268d4a 76 Gene3D G3DSA:1.20.1280.100 1 73 1.5E-39 T 14-10-2018 DA442_06625 38bcf998e47ad19b46e2f5793426ffa8 801 SUPERFAMILY SSF46955 403 475 1.19E-19 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DA442_06625 38bcf998e47ad19b46e2f5793426ffa8 801 Gene3D G3DSA:3.30.56.10 7 179 2.1E-70 T 14-10-2018 DA442_06625 38bcf998e47ad19b46e2f5793426ffa8 801 Gene3D G3DSA:3.30.56.10 401 475 8.8E-26 T 14-10-2018 DA442_06625 38bcf998e47ad19b46e2f5793426ffa8 801 SMART SM00896 707 800 6.4E-45 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 DA442_06625 38bcf998e47ad19b46e2f5793426ffa8 801 Gene3D G3DSA:3.50.40.10 197 395 1.6E-83 T 14-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 DA442_06625 38bcf998e47ad19b46e2f5793426ffa8 801 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 800 1.1E-276 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 DA442_06625 38bcf998e47ad19b46e2f5793426ffa8 801 SUPERFAMILY SSF55681 467 695 4.37E-49 T 14-10-2018 DA442_06625 38bcf998e47ad19b46e2f5793426ffa8 801 SUPERFAMILY SSF56037 196 394 6.8E-78 T 14-10-2018 DA442_06625 38bcf998e47ad19b46e2f5793426ffa8 801 SUPERFAMILY SSF50249 38 196 1.37E-47 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_06625 38bcf998e47ad19b46e2f5793426ffa8 801 Pfam PF03147 Ferredoxin-fold anticodon binding domain 707 800 1.1E-28 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 DA442_06625 38bcf998e47ad19b46e2f5793426ffa8 801 SMART SM00874 403 471 4.8E-29 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 DA442_06625 38bcf998e47ad19b46e2f5793426ffa8 801 Pfam PF03483 B3/4 domain 212 385 1.5E-71 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 DA442_06625 38bcf998e47ad19b46e2f5793426ffa8 801 Pfam PF01588 Putative tRNA binding domain 45 145 8.3E-26 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 DA442_06625 38bcf998e47ad19b46e2f5793426ffa8 801 SUPERFAMILY SSF54991 703 800 3.27E-30 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 DA442_06625 38bcf998e47ad19b46e2f5793426ffa8 801 SMART SM00873 212 385 1.7E-100 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 DA442_06625 38bcf998e47ad19b46e2f5793426ffa8 801 Gene3D G3DSA:2.40.50.140 39 154 2.1E-70 T 14-10-2018 DA442_06625 38bcf998e47ad19b46e2f5793426ffa8 801 Pfam PF03484 tRNA synthetase B5 domain 406 471 3.2E-17 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 DA442_06625 38bcf998e47ad19b46e2f5793426ffa8 801 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 794 47.0 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 DA442_06625 38bcf998e47ad19b46e2f5793426ffa8 801 Gene3D G3DSA:3.30.930.10 486 697 2.4E-60 T 14-10-2018 DA442_06625 38bcf998e47ad19b46e2f5793426ffa8 801 Gene3D G3DSA:3.30.70.380 708 801 1.6E-29 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 DA442_04145 ccf936d351bd4ffecb37b5e94aeacafd 384 Gene3D G3DSA:1.20.1330.10 44 333 6.8E-76 T 14-10-2018 DA442_04145 ccf936d351bd4ffecb37b5e94aeacafd 384 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.1E-42 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DA442_04145 ccf936d351bd4ffecb37b5e94aeacafd 384 Gene3D G3DSA:3.30.70.2120 174 282 6.8E-76 T 14-10-2018 DA442_04145 ccf936d351bd4ffecb37b5e94aeacafd 384 Pfam PF07196 Flagellin hook IN motif 195 252 1.2E-10 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 DA442_04145 ccf936d351bd4ffecb37b5e94aeacafd 384 PRINTS PR00207 Flagellin signature 111 134 2.4E-24 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DA442_04145 ccf936d351bd4ffecb37b5e94aeacafd 384 PRINTS PR00207 Flagellin signature 37 54 2.4E-24 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DA442_04145 ccf936d351bd4ffecb37b5e94aeacafd 384 PRINTS PR00207 Flagellin signature 76 95 2.4E-24 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DA442_04145 ccf936d351bd4ffecb37b5e94aeacafd 384 SUPERFAMILY SSF64518 1 384 3.14E-97 T 14-10-2018 DA442_04145 ccf936d351bd4ffecb37b5e94aeacafd 384 Pfam PF00700 Bacterial flagellin C-terminal helical region 299 383 3.3E-26 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DA442_04145 ccf936d351bd4ffecb37b5e94aeacafd 384 Gene3D G3DSA:1.10.8.410 334 384 1.4E-21 T 14-10-2018 DA442_23110 1b9db888745dc0db351d6b3f3853204f 704 Gene3D G3DSA:3.90.70.10 1 126 8.1E-38 T 14-10-2018 DA442_23110 1b9db888745dc0db351d6b3f3853204f 704 ProSitePatterns PS00211 ABC transporters family signature. 607 621 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_23110 1b9db888745dc0db351d6b3f3853204f 704 Pfam PF00005 ABC transporter 487 635 4.5E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_23110 1b9db888745dc0db351d6b3f3853204f 704 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 3 698 4.0E-294 T 14-10-2018 IPR017750 ATPase, type I secretion system DA442_23110 1b9db888745dc0db351d6b3f3853204f 704 Gene3D G3DSA:3.40.50.300 461 703 1.4E-74 T 14-10-2018 DA442_23110 1b9db888745dc0db351d6b3f3853204f 704 SUPERFAMILY SSF90123 138 452 1.27E-49 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DA442_23110 1b9db888745dc0db351d6b3f3853204f 704 SUPERFAMILY SSF52540 459 693 2.33E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_23110 1b9db888745dc0db351d6b3f3853204f 704 Pfam PF00664 ABC transporter transmembrane region 158 417 2.5E-20 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DA442_23110 1b9db888745dc0db351d6b3f3853204f 704 Gene3D G3DSA:1.20.1560.10 141 454 3.6E-56 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DA442_23110 1b9db888745dc0db351d6b3f3853204f 704 SMART SM00382 495 681 2.3E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_23110 1b9db888745dc0db351d6b3f3853204f 704 Pfam PF03412 Peptidase C39 family 5 124 1.5E-4 T 14-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 DA442_06800 5ecf395efa351efa2b271cd840486971 527 Gene3D G3DSA:3.30.750.170 88 434 5.4E-70 T 14-10-2018 DA442_06800 5ecf395efa351efa2b271cd840486971 527 Pfam PF03572 Peptidase family S41 259 406 1.0E-22 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 DA442_06800 5ecf395efa351efa2b271cd840486971 527 Gene3D G3DSA:3.90.226.10 244 482 5.4E-70 T 14-10-2018 DA442_06800 5ecf395efa351efa2b271cd840486971 527 Gene3D G3DSA:2.30.42.10 138 243 5.4E-70 T 14-10-2018 DA442_06800 5ecf395efa351efa2b271cd840486971 527 SUPERFAMILY SSF52096 125 450 2.98E-31 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DA442_06800 5ecf395efa351efa2b271cd840486971 527 SMART SM00245 230 448 0.0028 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 DA442_06800 5ecf395efa351efa2b271cd840486971 527 SUPERFAMILY SSF50156 146 208 1.46E-6 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 DA442_04795 3308a9ef8492d5667d1c583302c6be8d 426 SMART SM00382 113 266 2.0E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_04795 3308a9ef8492d5667d1c583302c6be8d 426 SMART SM00994 13 52 1.0E-24 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 DA442_04795 3308a9ef8492d5667d1c583302c6be8d 426 SUPERFAMILY SSF57716 14 49 5.84E-12 T 14-10-2018 DA442_04795 3308a9ef8492d5667d1c583302c6be8d 426 Gene3D G3DSA:1.10.8.60 318 426 1.7E-41 T 14-10-2018 DA442_04795 3308a9ef8492d5667d1c583302c6be8d 426 SUPERFAMILY SSF52540 63 404 5.02E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_04795 3308a9ef8492d5667d1c583302c6be8d 426 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 5 417 53.324 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 DA442_04795 3308a9ef8492d5667d1c583302c6be8d 426 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 312 1.2E-48 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DA442_04795 3308a9ef8492d5667d1c583302c6be8d 426 SMART SM01086 319 414 2.4E-34 T 14-10-2018 IPR019489 Clp ATPase, C-terminal DA442_04795 3308a9ef8492d5667d1c583302c6be8d 426 Gene3D G3DSA:3.30.50.30 2 53 1.4E-26 T 14-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily DA442_04795 3308a9ef8492d5667d1c583302c6be8d 426 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 12 414 2.2E-209 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 DA442_04795 3308a9ef8492d5667d1c583302c6be8d 426 Gene3D G3DSA:3.40.50.300 59 317 1.0E-108 T 14-10-2018 DA442_04795 3308a9ef8492d5667d1c583302c6be8d 426 Pfam PF06689 ClpX C4-type zinc finger 14 51 1.2E-20 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 DA442_04795 3308a9ef8492d5667d1c583302c6be8d 426 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 396 7.1E-16 T 14-10-2018 IPR019489 Clp ATPase, C-terminal DA442_09135 c545708bb87aca226b1482cc04739d0c 241 Pfam PF14559 Tetratricopeptide repeat 154 197 1.0E-5 T 14-10-2018 DA442_09135 c545708bb87aca226b1482cc04739d0c 241 Pfam PF13431 Tetratricopeptide repeat 95 127 1.6E-6 T 14-10-2018 DA442_09135 c545708bb87aca226b1482cc04739d0c 241 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 10 239 5.3E-80 T 14-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW DA442_09135 c545708bb87aca226b1482cc04739d0c 241 SMART SM00028 73 106 6.6 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_09135 c545708bb87aca226b1482cc04739d0c 241 SMART SM00028 143 176 0.66 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_09135 c545708bb87aca226b1482cc04739d0c 241 SMART SM00028 107 140 46.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_09135 c545708bb87aca226b1482cc04739d0c 241 SMART SM00028 39 72 42.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_09135 c545708bb87aca226b1482cc04739d0c 241 SUPERFAMILY SSF81901 34 200 7.59E-21 T 14-10-2018 DA442_09135 c545708bb87aca226b1482cc04739d0c 241 Gene3D G3DSA:1.25.40.10 37 241 6.0E-37 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_00360 50a5c059a69b403b1d4ae22c364176d2 279 SUPERFAMILY SSF53335 9 273 5.09E-96 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_00360 50a5c059a69b403b1d4ae22c364176d2 279 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 277 2.2E-115 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 DA442_00360 50a5c059a69b403b1d4ae22c364176d2 279 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.31 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 DA442_00360 50a5c059a69b403b1d4ae22c364176d2 279 Gene3D G3DSA:3.40.50.150 1 279 5.9E-115 T 14-10-2018 DA442_04455 800cb2c3826fcee52fd289e7ff151965 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.42 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DA442_04455 800cb2c3826fcee52fd289e7ff151965 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 14-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site DA442_04455 800cb2c3826fcee52fd289e7ff151965 290 SMART SM00881 4 100 6.0E-36 T 14-10-2018 IPR003781 CoA-binding GO:0048037 DA442_04455 800cb2c3826fcee52fd289e7ff151965 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 287 2.5E-146 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DA442_04455 800cb2c3826fcee52fd289e7ff151965 290 SUPERFAMILY SSF51735 1 122 4.5E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_04455 800cb2c3826fcee52fd289e7ff151965 290 Gene3D G3DSA:3.40.50.261 124 288 6.5E-76 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DA442_04455 800cb2c3826fcee52fd289e7ff151965 290 Gene3D G3DSA:3.40.50.720 2 123 1.1E-51 T 14-10-2018 DA442_04455 800cb2c3826fcee52fd289e7ff151965 290 SUPERFAMILY SSF52210 123 285 2.09E-55 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DA442_04455 800cb2c3826fcee52fd289e7ff151965 290 PIRSF PIRSF001553 1 289 1.3E-134 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DA442_04455 800cb2c3826fcee52fd289e7ff151965 290 Pfam PF02629 CoA binding domain 6 99 3.1E-31 T 14-10-2018 IPR003781 CoA-binding GO:0048037 DA442_04455 800cb2c3826fcee52fd289e7ff151965 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 14-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site DA442_04455 800cb2c3826fcee52fd289e7ff151965 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.8E-40 T 14-10-2018 DA442_04455 800cb2c3826fcee52fd289e7ff151965 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.8E-40 T 14-10-2018 DA442_04455 800cb2c3826fcee52fd289e7ff151965 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.8E-40 T 14-10-2018 DA442_04455 800cb2c3826fcee52fd289e7ff151965 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.8E-40 T 14-10-2018 DA442_04455 800cb2c3826fcee52fd289e7ff151965 290 Pfam PF00549 CoA-ligase 151 271 3.2E-22 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DA442_05425 9dacebbe0eb0bb3c1226797d977d38e8 501 Pfam PF14402 7 transmembrane helices usually fused to an inactive transglutaminase 255 498 5.6E-109 T 14-10-2018 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase DA442_05425 9dacebbe0eb0bb3c1226797d977d38e8 501 Pfam PF14400 Inactive transglutaminase fused to 7 transmembrane helices 24 183 1.5E-58 T 14-10-2018 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices DA442_15375 7c0460848103071c674915e87844ba25 940 Gene3D G3DSA:1.10.8.280 286 402 4.7E-246 T 14-10-2018 DA442_15375 7c0460848103071c674915e87844ba25 940 Gene3D G3DSA:1.20.1580.10 90 491 4.7E-246 T 14-10-2018 DA442_15375 7c0460848103071c674915e87844ba25 940 SUPERFAMILY SSF52540 4 568 2.09E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_15375 7c0460848103071c674915e87844ba25 940 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_15375 7c0460848103071c674915e87844ba25 940 SUPERFAMILY SSF52540 620 912 4.28E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_15375 7c0460848103071c674915e87844ba25 940 Gene3D G3DSA:3.40.50.300 616 935 5.4E-141 T 14-10-2018 DA442_15375 7c0460848103071c674915e87844ba25 940 Pfam PF00005 ABC transporter 622 859 5.4E-10 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_15375 7c0460848103071c674915e87844ba25 940 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 939 22.943 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 DA442_15375 7c0460848103071c674915e87844ba25 940 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 923 0.0 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 DA442_15375 7c0460848103071c674915e87844ba25 940 Gene3D G3DSA:3.40.50.300 6 593 4.7E-246 T 14-10-2018 DA442_15375 7c0460848103071c674915e87844ba25 940 ProSitePatterns PS00211 ABC transporters family signature. 829 843 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_15375 7c0460848103071c674915e87844ba25 940 Gene3D G3DSA:1.20.1580.10 691 829 5.4E-141 T 14-10-2018 DA442_15375 7c0460848103071c674915e87844ba25 940 Gene3D G3DSA:3.30.190.20 130 243 4.7E-246 T 14-10-2018 DA442_03095 c334649fbe99c2ca0448fc72bdd57d84 404 PIRSF PIRSF005572 2 384 2.2E-138 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 DA442_03095 c334649fbe99c2ca0448fc72bdd57d84 404 Gene3D G3DSA:3.40.640.10 16 262 1.4E-169 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_03095 c334649fbe99c2ca0448fc72bdd57d84 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site DA442_03095 c334649fbe99c2ca0448fc72bdd57d84 404 SUPERFAMILY SSF53383 5 391 2.39E-116 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_03095 c334649fbe99c2ca0448fc72bdd57d84 404 Gene3D G3DSA:3.90.1150.10 5 375 1.4E-169 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DA442_03095 c334649fbe99c2ca0448fc72bdd57d84 404 Pfam PF00266 Aminotransferase class-V 5 368 7.2E-90 T 14-10-2018 IPR000192 Aminotransferase class V domain DA442_03095 c334649fbe99c2ca0448fc72bdd57d84 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 1.2E-230 T 14-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 DA442_03095 c334649fbe99c2ca0448fc72bdd57d84 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 54.731 T 14-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 DA442_11425 31a06dcf68714340bcba44761683ca31 480 SUPERFAMILY SSF50800 74 169 2.09E-27 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily DA442_11425 31a06dcf68714340bcba44761683ca31 480 Gene3D G3DSA:2.40.33.10 74 172 6.5E-155 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DA442_11425 31a06dcf68714340bcba44761683ca31 480 Pfam PF00224 Pyruvate kinase, barrel domain 6 345 2.9E-131 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DA442_11425 31a06dcf68714340bcba44761683ca31 480 SUPERFAMILY SSF52935 329 480 3.27E-38 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DA442_11425 31a06dcf68714340bcba44761683ca31 480 PRINTS PR01050 Pyruvate kinase family signature 63 79 6.4E-54 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DA442_11425 31a06dcf68714340bcba44761683ca31 480 PRINTS PR01050 Pyruvate kinase family signature 300 318 6.4E-54 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DA442_11425 31a06dcf68714340bcba44761683ca31 480 PRINTS PR01050 Pyruvate kinase family signature 190 204 6.4E-54 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DA442_11425 31a06dcf68714340bcba44761683ca31 480 PRINTS PR01050 Pyruvate kinase family signature 250 274 6.4E-54 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DA442_11425 31a06dcf68714340bcba44761683ca31 480 PRINTS PR01050 Pyruvate kinase family signature 223 249 6.4E-54 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DA442_11425 31a06dcf68714340bcba44761683ca31 480 PRINTS PR01050 Pyruvate kinase family signature 275 299 6.4E-54 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DA442_11425 31a06dcf68714340bcba44761683ca31 480 PRINTS PR01050 Pyruvate kinase family signature 319 335 6.4E-54 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DA442_11425 31a06dcf68714340bcba44761683ca31 480 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 14-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DA442_11425 31a06dcf68714340bcba44761683ca31 480 SUPERFAMILY SSF51621 4 344 2.23E-86 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DA442_11425 31a06dcf68714340bcba44761683ca31 480 Gene3D G3DSA:3.40.1380.20 342 476 6.5E-155 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DA442_11425 31a06dcf68714340bcba44761683ca31 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 479 7.0E-169 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DA442_11425 31a06dcf68714340bcba44761683ca31 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 478 9.0E-29 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DA442_11425 31a06dcf68714340bcba44761683ca31 480 Gene3D G3DSA:3.20.20.60 6 341 6.5E-155 T 14-10-2018 DA442_08480 c82487e26c08c9736121fb1053e8799c 365 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 173 357 3.0E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DA442_08480 c82487e26c08c9736121fb1053e8799c 365 Gene3D G3DSA:1.10.3720.10 148 363 4.8E-48 T 14-10-2018 IPR035906 MetI-like superfamily DA442_08480 c82487e26c08c9736121fb1053e8799c 365 SUPERFAMILY SSF161098 155 346 6.54E-40 T 14-10-2018 IPR035906 MetI-like superfamily DA442_08480 c82487e26c08c9736121fb1053e8799c 365 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 155 251 6.9E-22 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DA442_13970 7a7c81439c63757919441f334072ceee 314 SUPERFAMILY SSF161093 132 311 1.96E-44 T 14-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 DA442_13970 7a7c81439c63757919441f334072ceee 314 Gene3D G3DSA:1.10.357.20 127 311 1.9E-52 T 14-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain DA442_13970 7a7c81439c63757919441f334072ceee 314 Pfam PF01769 Divalent cation transporter 175 304 1.6E-26 T 14-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 DA442_18850 eb4c82aebb331da715ac0d552fa4c656 289 Gene3D G3DSA:3.90.226.10 25 284 5.2E-78 T 14-10-2018 DA442_18850 eb4c82aebb331da715ac0d552fa4c656 289 Pfam PF01039 Carboxyl transferase domain 96 240 4.3E-13 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 DA442_18850 eb4c82aebb331da715ac0d552fa4c656 289 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 35.618 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DA442_18850 eb4c82aebb331da715ac0d552fa4c656 289 SUPERFAMILY SSF52096 25 283 1.79E-79 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DA442_18850 eb4c82aebb331da715ac0d552fa4c656 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 5.9E-35 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DA442_18850 eb4c82aebb331da715ac0d552fa4c656 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 5.9E-35 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DA442_18850 eb4c82aebb331da715ac0d552fa4c656 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 5.9E-35 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DA442_18850 eb4c82aebb331da715ac0d552fa4c656 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 5.9E-35 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DA442_18850 eb4c82aebb331da715ac0d552fa4c656 289 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 5.9E-35 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DA442_18850 eb4c82aebb331da715ac0d552fa4c656 289 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 282 4.5E-129 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DA442_15365 5e981d14d8182fb301e85248212718d9 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 208 5.3E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_15365 5e981d14d8182fb301e85248212718d9 214 Gene3D G3DSA:1.10.10.10 144 214 1.4E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_15365 5e981d14d8182fb301e85248212718d9 214 SUPERFAMILY SSF46894 141 210 1.94E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DA442_15365 5e981d14d8182fb301e85248212718d9 214 Gene3D G3DSA:3.40.50.2300 23 142 2.2E-24 T 14-10-2018 DA442_15365 5e981d14d8182fb301e85248212718d9 214 SMART SM00421 151 208 2.1E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_15365 5e981d14d8182fb301e85248212718d9 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 4.7E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_15365 5e981d14d8182fb301e85248212718d9 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 4.7E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_15365 5e981d14d8182fb301e85248212718d9 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 4.7E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_14050 196d738855b9eac318a1b466d6052e38 579 Gene3D G3DSA:1.50.10.10 94 579 4.9E-240 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 DA442_14050 196d738855b9eac318a1b466d6052e38 579 Pfam PF00759 Glycosyl hydrolase family 9 98 500 7.0E-23 T 14-10-2018 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 DA442_14050 196d738855b9eac318a1b466d6052e38 579 SUPERFAMILY SSF48208 85 565 6.8E-93 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 DA442_14050 196d738855b9eac318a1b466d6052e38 579 SUPERFAMILY SSF81296 2 90 1.05E-14 T 14-10-2018 IPR014756 Immunoglobulin E-set DA442_14050 196d738855b9eac318a1b466d6052e38 579 Gene3D G3DSA:2.60.40.10 1 93 3.9E-25 T 14-10-2018 IPR013783 Immunoglobulin-like fold DA442_14050 196d738855b9eac318a1b466d6052e38 579 Pfam PF02927 Cellulase N-terminal ig-like domain 5 84 1.7E-10 T 14-10-2018 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 DA442_12130 acc518af65632cea4ffc3c2f26bdad24 420 SUPERFAMILY SSF53244 288 417 4.43E-32 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DA442_12130 acc518af65632cea4ffc3c2f26bdad24 420 Gene3D G3DSA:3.90.190.20 288 420 3.2E-35 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DA442_12130 acc518af65632cea4ffc3c2f26bdad24 420 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 DA442_12130 acc518af65632cea4ffc3c2f26bdad24 420 Pfam PF02875 Mur ligase family, glutamate ligase domain 287 338 2.6E-5 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 DA442_12130 acc518af65632cea4ffc3c2f26bdad24 420 Gene3D G3DSA:3.40.1190.10 1 287 1.0E-89 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DA442_12130 acc518af65632cea4ffc3c2f26bdad24 420 PIRSF PIRSF001563 7 420 5.6E-104 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 DA442_12130 acc518af65632cea4ffc3c2f26bdad24 420 Pfam PF08245 Mur ligase middle domain 54 192 1.1E-6 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DA442_12130 acc518af65632cea4ffc3c2f26bdad24 420 SUPERFAMILY SSF53623 15 285 4.71E-84 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DA442_12130 acc518af65632cea4ffc3c2f26bdad24 420 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 415 2.9E-104 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 DA442_24005 2d6e24e2bd17743818dc29b6dd5787d6 209 Pfam PF16357 Putative PepSY_TM-like 10 209 9.7E-67 T 14-10-2018 IPR032307 Putative PepSY TM-like protein DA442_16580 2e3822f8edb8a3fb7c93648ac256d428 162 SUPERFAMILY SSF160369 4 159 1.12E-44 T 14-10-2018 DA442_16580 2e3822f8edb8a3fb7c93648ac256d428 162 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 159 24.068 T 14-10-2018 IPR022973 Ribosomal protein L10 DA442_16580 2e3822f8edb8a3fb7c93648ac256d428 162 Pfam PF00466 Ribosomal protein L10 5 101 6.9E-27 T 14-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 DA442_16580 2e3822f8edb8a3fb7c93648ac256d428 162 Gene3D G3DSA:3.30.70.1730 1 124 6.0E-35 T 14-10-2018 DA442_17180 b710c1d4d926b0e9e49e434a890c6e3c 596 Pfam PF16189 Creatinase/Prolidase N-terminal domain 148 306 1.6E-35 T 14-10-2018 DA442_17180 b710c1d4d926b0e9e49e434a890c6e3c 596 SUPERFAMILY SSF55920 303 559 1.83E-55 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like DA442_17180 b710c1d4d926b0e9e49e434a890c6e3c 596 Gene3D G3DSA:3.40.350.10 147 291 7.3E-25 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DA442_17180 b710c1d4d926b0e9e49e434a890c6e3c 596 SUPERFAMILY SSF53092 7 130 7.67E-20 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DA442_17180 b710c1d4d926b0e9e49e434a890c6e3c 596 Pfam PF01321 Creatinase/Prolidase N-terminal domain 8 133 5.5E-19 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 DA442_17180 b710c1d4d926b0e9e49e434a890c6e3c 596 Pfam PF16188 C-terminal region of peptidase_M24 534 593 7.6E-23 T 14-10-2018 IPR032416 Peptidase M24, C-terminal domain DA442_17180 b710c1d4d926b0e9e49e434a890c6e3c 596 Gene3D G3DSA:3.40.350.10 1 146 7.7E-36 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DA442_17180 b710c1d4d926b0e9e49e434a890c6e3c 596 Pfam PF00557 Metallopeptidase family M24 309 524 2.6E-42 T 14-10-2018 IPR000994 Peptidase M24 DA442_17180 b710c1d4d926b0e9e49e434a890c6e3c 596 Gene3D G3DSA:3.90.230.10 300 593 2.4E-94 T 14-10-2018 DA442_15490 6453fa63d090b527776e64f27b390797 623 Gene3D G3DSA:2.40.30.10 257 463 1.4E-71 T 14-10-2018 DA442_15490 6453fa63d090b527776e64f27b390797 623 SUPERFAMILY SSF63380 252 469 1.91E-62 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DA442_15490 6453fa63d090b527776e64f27b390797 623 Gene3D G3DSA:1.20.990.10 304 408 1.4E-71 T 14-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 DA442_15490 6453fa63d090b527776e64f27b390797 623 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 19 623 49.412 T 14-10-2018 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DA442_15490 6453fa63d090b527776e64f27b390797 623 PIRSF PIRSF000207 20 623 1.6E-281 T 14-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DA442_15490 6453fa63d090b527776e64f27b390797 623 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 27 623 1.9E-257 T 14-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DA442_15490 6453fa63d090b527776e64f27b390797 623 PRINTS PR00369 Flavodoxin signature 192 211 9.9E-10 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 DA442_15490 6453fa63d090b527776e64f27b390797 623 PRINTS PR00369 Flavodoxin signature 168 178 9.9E-10 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 DA442_15490 6453fa63d090b527776e64f27b390797 623 PRINTS PR00369 Flavodoxin signature 136 147 9.9E-10 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 DA442_15490 6453fa63d090b527776e64f27b390797 623 PRINTS PR00369 Flavodoxin signature 88 101 9.9E-10 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 DA442_15490 6453fa63d090b527776e64f27b390797 623 Gene3D G3DSA:3.40.50.360 77 240 8.3E-47 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DA442_15490 6453fa63d090b527776e64f27b390797 623 Pfam PF00258 Flavodoxin 89 220 7.7E-29 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 DA442_15490 6453fa63d090b527776e64f27b390797 623 SUPERFAMILY SSF52343 468 623 5.37E-51 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DA442_15490 6453fa63d090b527776e64f27b390797 623 Pfam PF00667 FAD binding domain 256 448 3.4E-28 T 14-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 DA442_15490 6453fa63d090b527776e64f27b390797 623 SUPERFAMILY SSF52218 86 233 2.92E-46 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DA442_15490 6453fa63d090b527776e64f27b390797 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 410 417 1.5E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DA442_15490 6453fa63d090b527776e64f27b390797 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 505 514 1.5E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DA442_15490 6453fa63d090b527776e64f27b390797 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 443 452 1.5E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DA442_15490 6453fa63d090b527776e64f27b390797 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 572 580 1.5E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DA442_15490 6453fa63d090b527776e64f27b390797 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 480 499 1.5E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DA442_15490 6453fa63d090b527776e64f27b390797 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 294 304 1.5E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DA442_15490 6453fa63d090b527776e64f27b390797 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 518 529 1.5E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DA442_15490 6453fa63d090b527776e64f27b390797 623 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 549 565 1.5E-29 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DA442_15490 6453fa63d090b527776e64f27b390797 623 Pfam PF00175 Oxidoreductase NAD-binding domain 481 587 8.1E-19 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 DA442_15490 6453fa63d090b527776e64f27b390797 623 Gene3D G3DSA:3.40.50.80 469 623 5.4E-60 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DA442_00480 16f0677f96308f9f943e96d23980727c 811 Gene3D G3DSA:3.30.450.20 134 269 2.5E-20 T 14-10-2018 DA442_00480 16f0677f96308f9f943e96d23980727c 811 Gene3D G3DSA:3.20.20.450 566 811 1.7E-98 T 14-10-2018 IPR035919 EAL domain superfamily DA442_00480 16f0677f96308f9f943e96d23980727c 811 Gene3D G3DSA:3.30.450.20 270 392 4.6E-36 T 14-10-2018 DA442_00480 16f0677f96308f9f943e96d23980727c 811 SMART SM00086 341 383 1.7E-7 T 14-10-2018 IPR001610 PAC motif DA442_00480 16f0677f96308f9f943e96d23980727c 811 SMART SM00086 219 261 3.9 T 14-10-2018 IPR001610 PAC motif DA442_00480 16f0677f96308f9f943e96d23980727c 811 SUPERFAMILY SSF55073 399 554 1.96E-45 T 14-10-2018 IPR029787 Nucleotide cyclase DA442_00480 16f0677f96308f9f943e96d23980727c 811 Gene3D G3DSA:3.30.70.270 393 565 7.2E-57 T 14-10-2018 DA442_00480 16f0677f96308f9f943e96d23980727c 811 Pfam PF00563 EAL domain 568 803 7.5E-72 T 14-10-2018 IPR001633 EAL domain DA442_00480 16f0677f96308f9f943e96d23980727c 811 Pfam PF00990 Diguanylate cyclase, GGDEF domain 394 547 2.5E-43 T 14-10-2018 IPR000160 GGDEF domain DA442_00480 16f0677f96308f9f943e96d23980727c 811 Pfam PF08448 PAS fold 156 262 1.8E-11 T 14-10-2018 IPR013656 PAS fold-4 DA442_00480 16f0677f96308f9f943e96d23980727c 811 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 150 268 2.3E-8 T 14-10-2018 IPR000014 PAS domain DA442_00480 16f0677f96308f9f943e96d23980727c 811 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 273 390 1.0E-23 T 14-10-2018 IPR000014 PAS domain DA442_00480 16f0677f96308f9f943e96d23980727c 811 SMART SM00091 146 212 2.4 T 14-10-2018 IPR000014 PAS domain DA442_00480 16f0677f96308f9f943e96d23980727c 811 SMART SM00091 269 336 1.5E-8 T 14-10-2018 IPR000014 PAS domain DA442_00480 16f0677f96308f9f943e96d23980727c 811 SUPERFAMILY SSF55785 277 380 1.92E-28 T 14-10-2018 IPR035965 PAS domain superfamily DA442_00480 16f0677f96308f9f943e96d23980727c 811 SMART SM00267 383 552 4.0E-61 T 14-10-2018 IPR000160 GGDEF domain DA442_00480 16f0677f96308f9f943e96d23980727c 811 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 390 550 7.6E-39 T 14-10-2018 IPR000160 GGDEF domain DA442_00480 16f0677f96308f9f943e96d23980727c 811 Pfam PF00989 PAS fold 273 380 5.6E-19 T 14-10-2018 IPR013767 PAS fold GO:0006355 DA442_00480 16f0677f96308f9f943e96d23980727c 811 SUPERFAMILY SSF141868 568 809 2.48E-87 T 14-10-2018 IPR035919 EAL domain superfamily DA442_00480 16f0677f96308f9f943e96d23980727c 811 SMART SM00052 562 808 5.4E-116 T 14-10-2018 IPR001633 EAL domain DA442_00480 16f0677f96308f9f943e96d23980727c 811 SUPERFAMILY SSF55785 152 262 8.2E-17 T 14-10-2018 IPR035965 PAS domain superfamily DA442_21410 f190c523157abff66a1fa6dafe1dd901 315 SUPERFAMILY SSF53807 35 305 2.31E-50 T 14-10-2018 DA442_21410 f190c523157abff66a1fa6dafe1dd901 315 Gene3D G3DSA:3.40.50.1980 52 199 5.0E-19 T 14-10-2018 DA442_21410 f190c523157abff66a1fa6dafe1dd901 315 Gene3D G3DSA:3.40.50.1980 202 311 2.4E-5 T 14-10-2018 DA442_21410 f190c523157abff66a1fa6dafe1dd901 315 Pfam PF01297 Zinc-uptake complex component A periplasmic 56 308 1.0E-22 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 DA442_02220 441efcc51a268eb58f8ac264fbdf80e0 761 SUPERFAMILY SSF101904 499 743 1.31E-50 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DA442_02220 441efcc51a268eb58f8ac264fbdf80e0 761 SMART SM00434 13 463 4.8E-234 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DA442_02220 441efcc51a268eb58f8ac264fbdf80e0 761 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 600 635 0.17 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DA442_02220 441efcc51a268eb58f8ac264fbdf80e0 761 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 647 693 1.4E-7 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DA442_02220 441efcc51a268eb58f8ac264fbdf80e0 761 Gene3D G3DSA:2.120.10.90 502 739 1.6E-13 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DA442_02220 441efcc51a268eb58f8ac264fbdf80e0 761 Gene3D G3DSA:3.30.1360.40 240 333 1.9E-180 T 14-10-2018 DA442_02220 441efcc51a268eb58f8ac264fbdf80e0 761 SUPERFAMILY SSF56719 33 485 1.07E-156 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DA442_02220 441efcc51a268eb58f8ac264fbdf80e0 761 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 34 470 2.3E-137 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DA442_02220 441efcc51a268eb58f8ac264fbdf80e0 761 Gene3D G3DSA:3.90.199.10 34 483 1.9E-180 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 DA442_02220 441efcc51a268eb58f8ac264fbdf80e0 761 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 6 745 33.953 T 14-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DA442_02220 441efcc51a268eb58f8ac264fbdf80e0 761 Gene3D G3DSA:1.10.268.10 371 456 1.9E-180 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DA442_02220 441efcc51a268eb58f8ac264fbdf80e0 761 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 10 744 0.0 T 14-10-2018 DA442_05195 0831d5f71c7cffa61d37720793442bef 328 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 31 325 8.8E-83 T 14-10-2018 IPR018707 Protein of unknown function DUF2219 DA442_05195 0831d5f71c7cffa61d37720793442bef 328 Gene3D G3DSA:2.40.128.140 23 327 1.2E-52 T 14-10-2018 IPR037107 Putative outer membrane protein superfamily DA442_03700 43e5fe0c4c273a9427f2b9f2a8ad54ac 641 Gene3D G3DSA:3.90.1310.10 66 250 4.0E-54 T 14-10-2018 DA442_03700 43e5fe0c4c273a9427f2b9f2a8ad54ac 641 SUPERFAMILY SSF56519 58 254 2.49E-56 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 DA442_03700 43e5fe0c4c273a9427f2b9f2a8ad54ac 641 Gene3D G3DSA:3.30.1390.30 87 162 4.0E-54 T 14-10-2018 DA442_03700 43e5fe0c4c273a9427f2b9f2a8ad54ac 641 SUPERFAMILY SSF56601 256 619 2.54E-96 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DA442_03700 43e5fe0c4c273a9427f2b9f2a8ad54ac 641 Pfam PF03717 Penicillin-binding Protein dimerisation domain 66 241 5.1E-52 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 DA442_03700 43e5fe0c4c273a9427f2b9f2a8ad54ac 641 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 22 620 3.7E-240 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DA442_03700 43e5fe0c4c273a9427f2b9f2a8ad54ac 641 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 5 624 53.74 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DA442_03700 43e5fe0c4c273a9427f2b9f2a8ad54ac 641 Pfam PF00905 Penicillin binding protein transpeptidase domain 273 617 5.0E-76 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DA442_03700 43e5fe0c4c273a9427f2b9f2a8ad54ac 641 Gene3D G3DSA:3.40.710.10 251 629 5.0E-94 T 14-10-2018 DA442_24470 7c487848b0ccd5919c0c59ee2ec64ff6 290 SUPERFAMILY SSF53850 94 289 1.19E-27 T 14-10-2018 DA442_24470 7c487848b0ccd5919c0c59ee2ec64ff6 290 Gene3D G3DSA:1.10.10.10 7 97 5.7E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_24470 7c487848b0ccd5919c0c59ee2ec64ff6 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.6E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_24470 7c487848b0ccd5919c0c59ee2ec64ff6 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.6E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_24470 7c487848b0ccd5919c0c59ee2ec64ff6 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.6E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_24470 7c487848b0ccd5919c0c59ee2ec64ff6 290 Pfam PF03466 LysR substrate binding domain 92 289 3.0E-26 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_24470 7c487848b0ccd5919c0c59ee2ec64ff6 290 SUPERFAMILY SSF46785 1 85 7.48E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_24470 7c487848b0ccd5919c0c59ee2ec64ff6 290 Gene3D G3DSA:3.40.190.10 103 285 1.0E-40 T 14-10-2018 DA442_24470 7c487848b0ccd5919c0c59ee2ec64ff6 290 Gene3D G3DSA:3.40.190.10 163 261 1.0E-40 T 14-10-2018 DA442_24470 7c487848b0ccd5919c0c59ee2ec64ff6 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.1E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_18680 6b401cad7475dd1afac4f43cc3564249 470 Pfam PF00171 Aldehyde dehydrogenase family 31 440 2.1E-95 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DA442_18680 6b401cad7475dd1afac4f43cc3564249 470 Gene3D G3DSA:3.40.309.10 221 420 2.8E-156 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DA442_18680 6b401cad7475dd1afac4f43cc3564249 470 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 217 224 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DA442_18680 6b401cad7475dd1afac4f43cc3564249 470 Gene3D G3DSA:3.40.605.10 22 440 2.8E-156 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DA442_18680 6b401cad7475dd1afac4f43cc3564249 470 PIRSF PIRSF036492 2 469 2.6E-161 T 14-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 DA442_18680 6b401cad7475dd1afac4f43cc3564249 470 SUPERFAMILY SSF53720 14 441 2.09E-120 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DA442_08940 a36bc7573bd0fc1487605e3fc3f416e6 539 SMART SM00091 213 279 5.6E-5 T 14-10-2018 IPR000014 PAS domain DA442_08940 a36bc7573bd0fc1487605e3fc3f416e6 539 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 420 536 4.9E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_08940 a36bc7573bd0fc1487605e3fc3f416e6 539 SUPERFAMILY SSF55785 215 306 2.97E-11 T 14-10-2018 IPR035965 PAS domain superfamily DA442_08940 a36bc7573bd0fc1487605e3fc3f416e6 539 SMART SM00387 418 537 1.8E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_08940 a36bc7573bd0fc1487605e3fc3f416e6 539 SUPERFAMILY SSF55874 389 534 2.75E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_08940 a36bc7573bd0fc1487605e3fc3f416e6 539 Pfam PF00989 PAS fold 214 277 5.9E-7 T 14-10-2018 IPR013767 PAS fold GO:0006355 DA442_08940 a36bc7573bd0fc1487605e3fc3f416e6 539 SUPERFAMILY SSF55890 322 390 1.14E-9 T 14-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 DA442_08940 a36bc7573bd0fc1487605e3fc3f416e6 539 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 320 372 3.0E-9 T 14-10-2018 IPR039506 SpoOB, alpha-helical domain DA442_08940 a36bc7573bd0fc1487605e3fc3f416e6 539 Pfam PF17203 Single cache domain 3 39 168 3.0E-19 T 14-10-2018 IPR033463 Single cache domain 3 DA442_08940 a36bc7573bd0fc1487605e3fc3f416e6 539 Gene3D G3DSA:3.30.450.20 199 310 1.6E-22 T 14-10-2018 DA442_08940 a36bc7573bd0fc1487605e3fc3f416e6 539 SUPERFAMILY SSF103190 40 169 5.89E-35 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily DA442_08940 a36bc7573bd0fc1487605e3fc3f416e6 539 Gene3D G3DSA:3.30.565.10 382 539 1.3E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_08940 a36bc7573bd0fc1487605e3fc3f416e6 539 Gene3D G3DSA:3.30.450.20 33 164 3.7E-41 T 14-10-2018 DA442_08940 a36bc7573bd0fc1487605e3fc3f416e6 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 480 6.7E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_08940 a36bc7573bd0fc1487605e3fc3f416e6 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 534 6.7E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_08940 a36bc7573bd0fc1487605e3fc3f416e6 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 515 6.7E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_14115 fd611baba76a98ef7d76902fdd3b5bc5 790 SUPERFAMILY SSF56601 343 777 1.09E-109 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DA442_14115 fd611baba76a98ef7d76902fdd3b5bc5 790 Pfam PF00905 Penicillin binding protein transpeptidase domain 453 691 1.4E-23 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DA442_14115 fd611baba76a98ef7d76902fdd3b5bc5 790 Pfam PF14814 Bifunctional transglycosylase second domain 94 178 4.2E-27 T 14-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DA442_14115 fd611baba76a98ef7d76902fdd3b5bc5 790 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 194 727 1.2E-156 T 14-10-2018 DA442_14115 fd611baba76a98ef7d76902fdd3b5bc5 790 Pfam PF00912 Transglycosylase 190 360 1.6E-59 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DA442_14115 fd611baba76a98ef7d76902fdd3b5bc5 790 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 49 772 0.0 T 14-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DA442_14115 fd611baba76a98ef7d76902fdd3b5bc5 790 Gene3D G3DSA:1.10.3810.10 182 385 8.1E-262 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DA442_14115 fd611baba76a98ef7d76902fdd3b5bc5 790 Gene3D G3DSA:3.30.2060.10 92 181 8.1E-262 T 14-10-2018 DA442_14115 fd611baba76a98ef7d76902fdd3b5bc5 790 PIRSF PIRSF002799 14 790 0.0 T 14-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DA442_14115 fd611baba76a98ef7d76902fdd3b5bc5 790 Gene3D G3DSA:3.40.710.10 84 741 8.1E-262 T 14-10-2018 DA442_14115 fd611baba76a98ef7d76902fdd3b5bc5 790 SUPERFAMILY SSF53955 190 383 5.91E-69 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily DA442_13235 37dafc52b9210216cb3cdd3372edb35c 350 PIRSF PIRSF000808 2 345 1.5E-124 T 14-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 DA442_13235 37dafc52b9210216cb3cdd3372edb35c 350 Gene3D G3DSA:3.30.428.10 178 350 4.6E-73 T 14-10-2018 IPR036265 HIT-like superfamily DA442_13235 37dafc52b9210216cb3cdd3372edb35c 350 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 4 349 2.6E-186 T 14-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 DA442_13235 37dafc52b9210216cb3cdd3372edb35c 350 SUPERFAMILY SSF54197 6 179 1.65E-72 T 14-10-2018 IPR036265 HIT-like superfamily DA442_13235 37dafc52b9210216cb3cdd3372edb35c 350 Gene3D G3DSA:3.30.428.10 46 177 1.3E-54 T 14-10-2018 IPR036265 HIT-like superfamily DA442_13235 37dafc52b9210216cb3cdd3372edb35c 350 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 186 349 1.0E-65 T 14-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 DA442_13235 37dafc52b9210216cb3cdd3372edb35c 350 SUPERFAMILY SSF54197 181 348 9.87E-56 T 14-10-2018 IPR036265 HIT-like superfamily DA442_13235 37dafc52b9210216cb3cdd3372edb35c 350 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 153 170 - T 14-10-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 DA442_13235 37dafc52b9210216cb3cdd3372edb35c 350 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 6 178 1.4E-66 T 14-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 DA442_11530 81712478b8d8879e5386a2c10e9ceb6a 174 Pfam PF02620 Uncharacterized ACR, COG1399 62 173 6.8E-17 T 14-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD DA442_20575 9cf0d58e7adf1d0562abeda16aad6dd2 437 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 35 54 1.1E-4 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DA442_20575 9cf0d58e7adf1d0562abeda16aad6dd2 437 Pfam PF00174 Oxidoreductase molybdopterin binding domain 124 290 6.3E-50 T 14-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 DA442_20575 9cf0d58e7adf1d0562abeda16aad6dd2 437 SUPERFAMILY SSF81296 322 435 9.1E-32 T 14-10-2018 IPR014756 Immunoglobulin E-set DA442_20575 9cf0d58e7adf1d0562abeda16aad6dd2 437 Gene3D G3DSA:3.90.420.10 71 319 2.4E-73 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 DA442_20575 9cf0d58e7adf1d0562abeda16aad6dd2 437 PRINTS PR00407 Eukaryotic molybdopterin domain signature 239 255 1.8E-25 T 14-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 DA442_20575 9cf0d58e7adf1d0562abeda16aad6dd2 437 PRINTS PR00407 Eukaryotic molybdopterin domain signature 416 429 1.8E-25 T 14-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 DA442_20575 9cf0d58e7adf1d0562abeda16aad6dd2 437 PRINTS PR00407 Eukaryotic molybdopterin domain signature 86 100 1.8E-25 T 14-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 DA442_20575 9cf0d58e7adf1d0562abeda16aad6dd2 437 PRINTS PR00407 Eukaryotic molybdopterin domain signature 320 332 1.8E-25 T 14-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 DA442_20575 9cf0d58e7adf1d0562abeda16aad6dd2 437 PRINTS PR00407 Eukaryotic molybdopterin domain signature 184 199 1.8E-25 T 14-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 DA442_20575 9cf0d58e7adf1d0562abeda16aad6dd2 437 PRINTS PR00407 Eukaryotic molybdopterin domain signature 256 269 1.8E-25 T 14-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 DA442_20575 9cf0d58e7adf1d0562abeda16aad6dd2 437 PRINTS PR00407 Eukaryotic molybdopterin domain signature 358 370 1.8E-25 T 14-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 DA442_20575 9cf0d58e7adf1d0562abeda16aad6dd2 437 PRINTS PR00407 Eukaryotic molybdopterin domain signature 106 122 1.8E-25 T 14-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 DA442_20575 9cf0d58e7adf1d0562abeda16aad6dd2 437 PRINTS PR00407 Eukaryotic molybdopterin domain signature 272 285 1.8E-25 T 14-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 DA442_20575 9cf0d58e7adf1d0562abeda16aad6dd2 437 Pfam PF03404 Mo-co oxidoreductase dimerisation domain 319 434 5.1E-20 T 14-10-2018 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 Reactome: R-HSA-1614517 DA442_20575 9cf0d58e7adf1d0562abeda16aad6dd2 437 SUPERFAMILY SSF56524 78 317 1.44E-67 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 DA442_20575 9cf0d58e7adf1d0562abeda16aad6dd2 437 Gene3D G3DSA:2.60.40.650 322 436 5.7E-33 T 14-10-2018 DA442_12380 25104c3e138f429defc630319c24c804 376 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 7.7E-122 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DA442_12380 25104c3e138f429defc630319c24c804 376 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 353 1.0E-134 T 14-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 DA442_12380 25104c3e138f429defc630319c24c804 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 3.6E-40 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DA442_12380 25104c3e138f429defc630319c24c804 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 3.6E-40 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DA442_12380 25104c3e138f429defc630319c24c804 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 3.6E-40 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DA442_12380 25104c3e138f429defc630319c24c804 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 3.6E-40 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DA442_12380 25104c3e138f429defc630319c24c804 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 3.6E-40 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DA442_12380 25104c3e138f429defc630319c24c804 376 SUPERFAMILY SSF160544 250 355 6.54E-40 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal DA442_12380 25104c3e138f429defc630319c24c804 376 Gene3D G3DSA:3.40.1690.10 218 359 2.5E-57 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal DA442_16820 45327525bcaeab6f50c29102b30a4bb2 407 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 131 404 65.112 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 DA442_16820 45327525bcaeab6f50c29102b30a4bb2 407 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 377 390 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DA442_16820 45327525bcaeab6f50c29102b30a4bb2 407 SMART SM00963 108 188 7.7E-27 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DA442_16820 45327525bcaeab6f50c29102b30a4bb2 407 SMART SM00382 202 394 7.9E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_16820 45327525bcaeab6f50c29102b30a4bb2 407 Pfam PF00448 SRP54-type protein, GTPase domain 204 403 3.0E-77 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DA442_16820 45327525bcaeab6f50c29102b30a4bb2 407 Pfam PF02881 SRP54-type protein, helical bundle domain 123 184 3.4E-13 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DA442_16820 45327525bcaeab6f50c29102b30a4bb2 407 SUPERFAMILY SSF52540 201 404 8.62E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_16820 45327525bcaeab6f50c29102b30a4bb2 407 Gene3D G3DSA:1.20.120.140 105 402 1.6E-117 T 14-10-2018 DA442_16820 45327525bcaeab6f50c29102b30a4bb2 407 Gene3D G3DSA:3.40.50.300 200 392 1.6E-117 T 14-10-2018 DA442_16820 45327525bcaeab6f50c29102b30a4bb2 407 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 131 403 4.2E-115 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 DA442_16820 45327525bcaeab6f50c29102b30a4bb2 407 SMART SM00962 203 404 2.9E-123 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DA442_16820 45327525bcaeab6f50c29102b30a4bb2 407 SUPERFAMILY SSF47364 103 182 2.62E-22 T 14-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 DA442_06235 27854c910f3f0f850c81ee806f1da274 233 Gene3D G3DSA:3.30.70.1560 127 210 7.7E-56 T 14-10-2018 DA442_06235 27854c910f3f0f850c81ee806f1da274 233 SUPERFAMILY SSF55174 1 85 1.05E-14 T 14-10-2018 DA442_06235 27854c910f3f0f850c81ee806f1da274 233 Pfam PF01479 S4 domain 1 46 1.0E-11 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_06235 27854c910f3f0f850c81ee806f1da274 233 Gene3D G3DSA:3.10.290.10 1 61 8.8E-17 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DA442_06235 27854c910f3f0f850c81ee806f1da274 233 Pfam PF00849 RNA pseudouridylate synthase 61 193 1.3E-18 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_06235 27854c910f3f0f850c81ee806f1da274 233 Gene3D G3DSA:3.30.70.580 62 228 7.7E-56 T 14-10-2018 DA442_06235 27854c910f3f0f850c81ee806f1da274 233 SUPERFAMILY SSF55120 60 228 2.88E-43 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_06235 27854c910f3f0f850c81ee806f1da274 233 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 98 112 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 DA442_06235 27854c910f3f0f850c81ee806f1da274 233 SMART SM00363 1 59 2.7E-11 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_06235 27854c910f3f0f850c81ee806f1da274 233 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 225 2.8E-48 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 DA442_23850 473a8f26a3f40eb9366bcf15fd2f56aa 266 Gene3D G3DSA:1.10.3720.10 64 260 3.0E-26 T 14-10-2018 IPR035906 MetI-like superfamily DA442_23850 473a8f26a3f40eb9366bcf15fd2f56aa 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 254 1.3E-31 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DA442_23850 473a8f26a3f40eb9366bcf15fd2f56aa 266 SUPERFAMILY SSF161098 68 250 8.76E-33 T 14-10-2018 IPR035906 MetI-like superfamily DA442_06485 b65f023d75220261032832b51819bb19 130 SUPERFAMILY SSF52540 22 97 3.56E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_06485 b65f023d75220261032832b51819bb19 130 Pfam PF03846 Cell division inhibitor SulA 17 96 4.3E-7 T 14-10-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 DA442_06485 b65f023d75220261032832b51819bb19 130 Gene3D G3DSA:3.40.50.300 15 123 3.5E-10 T 14-10-2018 DA442_11750 d6a132876928d79374c2611325c6c6bc 676 Pfam PF00271 Helicase conserved C-terminal domain 440 545 2.5E-17 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_11750 d6a132876928d79374c2611325c6c6bc 676 SUPERFAMILY SSF52540 37 584 5.89E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_11750 d6a132876928d79374c2611325c6c6bc 676 SMART SM00487 9 426 1.8E-28 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DA442_11750 d6a132876928d79374c2611325c6c6bc 676 Gene3D G3DSA:3.40.50.300 1 233 1.2E-72 T 14-10-2018 DA442_11750 d6a132876928d79374c2611325c6c6bc 676 SUPERFAMILY SSF46600 625 672 1.83E-10 T 14-10-2018 IPR036876 UVR domain superfamily DA442_11750 d6a132876928d79374c2611325c6c6bc 676 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 671 42.96 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 DA442_11750 d6a132876928d79374c2611325c6c6bc 676 SUPERFAMILY SSF52540 5 416 7.81E-137 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_11750 d6a132876928d79374c2611325c6c6bc 676 Gene3D G3DSA:3.40.50.300 269 415 4.5E-51 T 14-10-2018 DA442_11750 d6a132876928d79374c2611325c6c6bc 676 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 669 0.0 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 DA442_11750 d6a132876928d79374c2611325c6c6bc 676 Pfam PF02151 UvrB/uvrC motif 636 671 3.2E-8 T 14-10-2018 IPR001943 UVR domain GO:0005515 DA442_11750 d6a132876928d79374c2611325c6c6bc 676 SMART SM00490 461 547 2.7E-19 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_11750 d6a132876928d79374c2611325c6c6bc 676 Pfam PF04851 Type III restriction enzyme, res subunit 13 129 4.2E-9 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 DA442_11750 d6a132876928d79374c2611325c6c6bc 676 Pfam PF12344 Ultra-violet resistance protein B 553 595 3.8E-21 T 14-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain DA442_11750 d6a132876928d79374c2611325c6c6bc 676 Gene3D G3DSA:4.10.860.10 618 676 4.2E-19 T 14-10-2018 DA442_11750 d6a132876928d79374c2611325c6c6bc 676 Gene3D G3DSA:3.40.50.300 416 597 2.5E-50 T 14-10-2018 DA442_15865 f029495f09a92b89d40325a8965a38e9 403 PIRSF PIRSF000521 27 155 1.2E-6 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DA442_15865 f029495f09a92b89d40325a8965a38e9 403 PIRSF PIRSF000521 172 402 9.9E-37 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DA442_15865 f029495f09a92b89d40325a8965a38e9 403 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 16 399 6.6E-148 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 DA442_15865 f029495f09a92b89d40325a8965a38e9 403 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DA442_15865 f029495f09a92b89d40325a8965a38e9 403 Gene3D G3DSA:3.90.1150.10 25 392 2.2E-150 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DA442_15865 f029495f09a92b89d40325a8965a38e9 403 Gene3D G3DSA:3.40.640.10 59 304 2.2E-150 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_15865 f029495f09a92b89d40325a8965a38e9 403 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 403 8.2E-207 T 14-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 DA442_15865 f029495f09a92b89d40325a8965a38e9 403 SUPERFAMILY SSF53383 16 399 8.2E-130 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_15865 f029495f09a92b89d40325a8965a38e9 403 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 15 402 70.22 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 DA442_15865 f029495f09a92b89d40325a8965a38e9 403 Pfam PF00202 Aminotransferase class-III 22 399 7.1E-127 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DA442_19310 06a89f02c3ecd74c5feff41a8b3a3253 877 Gene3D G3DSA:3.40.630.30 713 877 1.1E-38 T 14-10-2018 DA442_19310 06a89f02c3ecd74c5feff41a8b3a3253 877 SUPERFAMILY SSF56059 476 683 6.19E-27 T 14-10-2018 DA442_19310 06a89f02c3ecd74c5feff41a8b3a3253 877 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 140 274 3.8E-43 T 14-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain DA442_19310 06a89f02c3ecd74c5feff41a8b3a3253 877 SMART SM00881 7 102 9.7E-21 T 14-10-2018 IPR003781 CoA-binding GO:0048037 DA442_19310 06a89f02c3ecd74c5feff41a8b3a3253 877 Pfam PF13380 CoA binding domain 12 124 2.3E-16 T 14-10-2018 IPR003781 CoA-binding GO:0048037 DA442_19310 06a89f02c3ecd74c5feff41a8b3a3253 877 Pfam PF13549 ATP-grasp domain 470 690 5.4E-68 T 14-10-2018 DA442_19310 06a89f02c3ecd74c5feff41a8b3a3253 877 Gene3D G3DSA:3.30.470.20 476 687 1.3E-55 T 14-10-2018 DA442_19310 06a89f02c3ecd74c5feff41a8b3a3253 877 Gene3D G3DSA:3.40.50.261 279 449 1.2E-49 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DA442_19310 06a89f02c3ecd74c5feff41a8b3a3253 877 Gene3D G3DSA:3.30.1490.20 495 572 1.3E-55 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DA442_19310 06a89f02c3ecd74c5feff41a8b3a3253 877 SUPERFAMILY SSF55729 718 862 5.67E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_19310 06a89f02c3ecd74c5feff41a8b3a3253 877 SUPERFAMILY SSF51735 2 128 1.43E-26 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_19310 06a89f02c3ecd74c5feff41a8b3a3253 877 Pfam PF00583 Acetyltransferase (GNAT) family 756 859 1.7E-7 T 14-10-2018 IPR000182 GNAT domain DA442_19310 06a89f02c3ecd74c5feff41a8b3a3253 877 Gene3D G3DSA:3.40.50.720 1 118 9.2E-27 T 14-10-2018 DA442_19310 06a89f02c3ecd74c5feff41a8b3a3253 877 Gene3D G3DSA:3.40.50.261 119 277 1.6E-43 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DA442_19310 06a89f02c3ecd74c5feff41a8b3a3253 877 SUPERFAMILY SSF52210 281 441 1.57E-38 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DA442_19310 06a89f02c3ecd74c5feff41a8b3a3253 877 SUPERFAMILY SSF52210 118 276 1.7E-32 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DA442_18435 31aaa0e26e4db2e61ac81a5229f37dbf 314 Gene3D G3DSA:1.10.1580.10 177 268 5.0E-29 T 14-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily DA442_18435 31aaa0e26e4db2e61ac81a5229f37dbf 314 Pfam PF01926 50S ribosome-binding GTPase 120 184 4.4E-14 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DA442_18435 31aaa0e26e4db2e61ac81a5229f37dbf 314 Gene3D G3DSA:3.40.50.300 6 174 2.1E-43 T 14-10-2018 DA442_18435 31aaa0e26e4db2e61ac81a5229f37dbf 314 PIRSF PIRSF006230 2 280 1.7E-105 T 14-10-2018 IPR016478 GTPase, MTG1 DA442_18435 31aaa0e26e4db2e61ac81a5229f37dbf 314 SUPERFAMILY SSF52540 12 186 2.98E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_18435 31aaa0e26e4db2e61ac81a5229f37dbf 314 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 6 275 1.5E-108 T 14-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis DA442_03740 64b5a714d0d24aa0c35845b8358230f4 299 Pfam PF00571 CBS domain 75 132 1.7E-8 T 14-10-2018 IPR000644 CBS domain DA442_03740 64b5a714d0d24aa0c35845b8358230f4 299 Pfam PF00571 CBS domain 145 195 1.6E-6 T 14-10-2018 IPR000644 CBS domain DA442_03740 64b5a714d0d24aa0c35845b8358230f4 299 SUPERFAMILY SSF56176 209 291 3.27E-23 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DA442_03740 64b5a714d0d24aa0c35845b8358230f4 299 Gene3D G3DSA:3.30.465.10 204 296 2.9E-31 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DA442_03740 64b5a714d0d24aa0c35845b8358230f4 299 SMART SM00116 84 133 0.0024 T 14-10-2018 IPR000644 CBS domain DA442_03740 64b5a714d0d24aa0c35845b8358230f4 299 SMART SM00116 147 195 0.028 T 14-10-2018 IPR000644 CBS domain DA442_03740 64b5a714d0d24aa0c35845b8358230f4 299 SUPERFAMILY SSF54631 65 206 9.1E-34 T 14-10-2018 DA442_03740 64b5a714d0d24aa0c35845b8358230f4 299 SMART SM01091 211 289 2.4E-30 T 14-10-2018 IPR005170 Transporter-associated domain DA442_03740 64b5a714d0d24aa0c35845b8358230f4 299 Gene3D G3DSA:3.10.580.10 57 203 1.8E-54 T 14-10-2018 DA442_03740 64b5a714d0d24aa0c35845b8358230f4 299 Pfam PF03471 Transporter associated domain 212 287 3.3E-22 T 14-10-2018 IPR005170 Transporter-associated domain DA442_16985 d3240dd0eda3033a73263c7599e7e879 312 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 232 248 - T 14-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DA442_16985 d3240dd0eda3033a73263c7599e7e879 312 Gene3D G3DSA:3.40.190.10 7 211 4.2E-85 T 14-10-2018 DA442_16985 d3240dd0eda3033a73263c7599e7e879 312 Gene3D G3DSA:3.40.190.10 104 203 4.2E-85 T 14-10-2018 DA442_16985 d3240dd0eda3033a73263c7599e7e879 312 PIRSF PIRSF001438 1 312 2.4E-122 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DA442_16985 d3240dd0eda3033a73263c7599e7e879 312 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 7 298 2.3E-115 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DA442_16985 d3240dd0eda3033a73263c7599e7e879 312 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 7 213 1.4E-79 T 14-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DA442_16985 d3240dd0eda3033a73263c7599e7e879 312 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 228 296 3.9E-20 T 14-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DA442_16985 d3240dd0eda3033a73263c7599e7e879 312 SUPERFAMILY SSF54782 221 310 5.89E-28 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DA442_16985 d3240dd0eda3033a73263c7599e7e879 312 Gene3D G3DSA:3.30.160.40 222 307 6.3E-28 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DA442_16985 d3240dd0eda3033a73263c7599e7e879 312 PRINTS PR00151 Porphobilinogen deaminase signature 46 66 2.3E-47 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DA442_16985 d3240dd0eda3033a73263c7599e7e879 312 PRINTS PR00151 Porphobilinogen deaminase signature 125 142 2.3E-47 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DA442_16985 d3240dd0eda3033a73263c7599e7e879 312 PRINTS PR00151 Porphobilinogen deaminase signature 144 161 2.3E-47 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DA442_16985 d3240dd0eda3033a73263c7599e7e879 312 PRINTS PR00151 Porphobilinogen deaminase signature 77 96 2.3E-47 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DA442_16985 d3240dd0eda3033a73263c7599e7e879 312 PRINTS PR00151 Porphobilinogen deaminase signature 231 248 2.3E-47 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DA442_16985 d3240dd0eda3033a73263c7599e7e879 312 SUPERFAMILY SSF53850 6 220 6.62E-86 T 14-10-2018 DA442_16985 d3240dd0eda3033a73263c7599e7e879 312 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 6 298 40.352 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DA442_12645 68f8986aac9cd38cb0a95db175a3ab14 814 Gene3D G3DSA:2.40.110.10 237 360 1.5E-97 T 14-10-2018 DA442_12645 68f8986aac9cd38cb0a95db175a3ab14 814 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 147 234 2.4E-15 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 DA442_12645 68f8986aac9cd38cb0a95db175a3ab14 814 SUPERFAMILY SSF47203 361 508 6.6E-22 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DA442_12645 68f8986aac9cd38cb0a95db175a3ab14 814 Gene3D G3DSA:1.20.140.10 361 508 1.5E-97 T 14-10-2018 DA442_12645 68f8986aac9cd38cb0a95db175a3ab14 814 Pfam PF09317 Domain of unknown function (DUF1974) 515 796 8.3E-116 T 14-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 DA442_12645 68f8986aac9cd38cb0a95db175a3ab14 814 Gene3D G3DSA:1.10.540.10 123 236 1.5E-97 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DA442_12645 68f8986aac9cd38cb0a95db175a3ab14 814 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 361 508 9.7E-13 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 DA442_12645 68f8986aac9cd38cb0a95db175a3ab14 814 SUPERFAMILY SSF56645 121 356 1.44E-42 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DA442_11485 e7466e775fa107987682621ed482a6ff 338 Gene3D G3DSA:3.30.160.60 302 338 7.9E-18 T 14-10-2018 DA442_11485 e7466e775fa107987682621ed482a6ff 338 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 5 336 2.0E-101 T 14-10-2018 IPR003770 Endolytic murein transglycosylase DA442_11485 e7466e775fa107987682621ed482a6ff 338 Pfam PF02618 YceG-like family 43 328 1.7E-82 T 14-10-2018 IPR003770 Endolytic murein transglycosylase DA442_11485 e7466e775fa107987682621ed482a6ff 338 Gene3D G3DSA:3.30.160.60 73 110 5.7E-8 T 14-10-2018 DA442_11485 e7466e775fa107987682621ed482a6ff 338 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 5 336 33.514 T 14-10-2018 IPR003770 Endolytic murein transglycosylase DA442_18025 2a57c2a607532e104bb757a7bb682315 103 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 13 87 2.9E-16 T 14-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 DA442_18025 2a57c2a607532e104bb757a7bb682315 103 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 7 101 2.0E-36 T 14-10-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 DA442_13555 483fec86b3018d4845f1f0cfa5cfd1ce 338 Pfam PF09588 YqaJ-like viral recombinase domain 13 147 1.0E-20 T 14-10-2018 IPR019080 YqaJ viral recombinase DA442_13555 483fec86b3018d4845f1f0cfa5cfd1ce 338 TIGRFAM TIGR03033 phage_rel_nuc: putative phage-type endonuclease 5 158 3.9E-42 T 14-10-2018 IPR017482 Putative phage-type endonuclease DA442_13555 483fec86b3018d4845f1f0cfa5cfd1ce 338 SUPERFAMILY SSF52980 1 199 2.14E-49 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DA442_13555 483fec86b3018d4845f1f0cfa5cfd1ce 338 Gene3D G3DSA:3.90.320.10 6 200 2.6E-35 T 14-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal DA442_08025 ccc34c6067610bab4b44e54b510525a5 277 Pfam PF04116 Fatty acid hydroxylase superfamily 92 229 4.2E-25 T 14-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 DA442_08630 eb4dc4056fc54c3408252e23e3f9c719 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 82 5.1E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_08630 eb4dc4056fc54c3408252e23e3f9c719 237 Gene3D G3DSA:1.20.120.530 81 231 6.5E-29 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DA442_08630 eb4dc4056fc54c3408252e23e3f9c719 237 SMART SM00345 24 82 1.1E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_08630 eb4dc4056fc54c3408252e23e3f9c719 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 56 7.6E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_08630 eb4dc4056fc54c3408252e23e3f9c719 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 56 72 7.6E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_08630 eb4dc4056fc54c3408252e23e3f9c719 237 SMART SM00895 92 219 7.0E-24 T 14-10-2018 IPR011711 GntR, C-terminal DA442_08630 eb4dc4056fc54c3408252e23e3f9c719 237 SUPERFAMILY SSF48008 89 224 1.8E-24 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DA442_08630 eb4dc4056fc54c3408252e23e3f9c719 237 Pfam PF07729 FCD domain 92 217 2.4E-26 T 14-10-2018 IPR011711 GntR, C-terminal DA442_08630 eb4dc4056fc54c3408252e23e3f9c719 237 Gene3D G3DSA:1.10.10.10 3 80 3.6E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_08630 eb4dc4056fc54c3408252e23e3f9c719 237 SUPERFAMILY SSF46785 16 111 3.9E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_04850 45d12176bd9b99d2030c4118c47c8bb6 571 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 13 140 1.3E-30 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 DA442_04850 45d12176bd9b99d2030c4118c47c8bb6 571 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 12 443 5.4E-131 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 DA442_04850 45d12176bd9b99d2030c4118c47c8bb6 571 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 422 549 2.6E-7 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 DA442_04850 45d12176bd9b99d2030c4118c47c8bb6 571 Gene3D G3DSA:3.40.50.970 4 199 1.2E-56 T 14-10-2018 DA442_04850 45d12176bd9b99d2030c4118c47c8bb6 571 SUPERFAMILY SSF52518 9 181 1.77E-31 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DA442_04850 45d12176bd9b99d2030c4118c47c8bb6 571 SUPERFAMILY SSF52467 221 346 1.45E-5 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DA442_04850 45d12176bd9b99d2030c4118c47c8bb6 571 SUPERFAMILY SSF52518 387 562 7.77E-26 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DA442_04850 45d12176bd9b99d2030c4118c47c8bb6 571 PIRSF PIRSF004983 3 571 1.7E-188 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 DA442_04850 45d12176bd9b99d2030c4118c47c8bb6 571 Gene3D G3DSA:3.40.50.1220 214 346 1.6E-41 T 14-10-2018 DA442_04850 45d12176bd9b99d2030c4118c47c8bb6 571 Gene3D G3DSA:3.40.50.970 366 568 1.1E-47 T 14-10-2018 DA442_04850 45d12176bd9b99d2030c4118c47c8bb6 571 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 6 567 32.329 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 DA442_04850 45d12176bd9b99d2030c4118c47c8bb6 571 Pfam PF16582 Middle domain of thiamine pyrophosphate 188 397 5.9E-38 T 14-10-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 DA442_11635 ea43ae67b52ebf9021d5a7f6239aa298 608 Gene3D G3DSA:3.20.20.80 114 520 3.1E-135 T 14-10-2018 DA442_11635 ea43ae67b52ebf9021d5a7f6239aa298 608 SMART SM00642 126 518 1.0E-82 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DA442_11635 ea43ae67b52ebf9021d5a7f6239aa298 608 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 8 104 5.3E-5 T 14-10-2018 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 DA442_11635 ea43ae67b52ebf9021d5a7f6239aa298 608 SUPERFAMILY SSF51011 527 607 3.96E-12 T 14-10-2018 DA442_11635 ea43ae67b52ebf9021d5a7f6239aa298 608 Pfam PF00128 Alpha amylase, catalytic domain 175 491 2.8E-76 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DA442_11635 ea43ae67b52ebf9021d5a7f6239aa298 608 Gene3D G3DSA:2.60.40.1180 521 607 5.1E-16 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta DA442_11635 ea43ae67b52ebf9021d5a7f6239aa298 608 PIRSF PIRSF036918 1 608 1.7E-261 T 14-10-2018 IPR017069 Maltodextrin glucosidase GO:0004558|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.20|KEGG: 00500+3.2.1.20|MetaCyc: PWY-842 DA442_11635 ea43ae67b52ebf9021d5a7f6239aa298 608 SUPERFAMILY SSF51445 113 527 2.61E-94 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DA442_11635 ea43ae67b52ebf9021d5a7f6239aa298 608 SUPERFAMILY SSF81296 1 109 5.25E-17 T 14-10-2018 IPR014756 Immunoglobulin E-set DA442_17680 87c27fdcf72021e13a5ef6fcae4798d2 480 Gene3D G3DSA:3.40.190.10 40 258 1.3E-31 T 14-10-2018 DA442_17680 87c27fdcf72021e13a5ef6fcae4798d2 480 SUPERFAMILY SSF53850 41 259 7.31E-35 T 14-10-2018 DA442_17680 87c27fdcf72021e13a5ef6fcae4798d2 480 SMART SM00267 299 465 1.5E-42 T 14-10-2018 IPR000160 GGDEF domain DA442_17680 87c27fdcf72021e13a5ef6fcae4798d2 480 SUPERFAMILY SSF55073 315 464 1.65E-36 T 14-10-2018 IPR029787 Nucleotide cyclase DA442_17680 87c27fdcf72021e13a5ef6fcae4798d2 480 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 258 3.0E-25 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DA442_17680 87c27fdcf72021e13a5ef6fcae4798d2 480 SMART SM00062 40 262 1.6E-4 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DA442_17680 87c27fdcf72021e13a5ef6fcae4798d2 480 Pfam PF00990 Diguanylate cyclase, GGDEF domain 311 460 9.7E-33 T 14-10-2018 IPR000160 GGDEF domain DA442_17680 87c27fdcf72021e13a5ef6fcae4798d2 480 Gene3D G3DSA:3.40.190.10 125 221 1.3E-31 T 14-10-2018 DA442_17680 87c27fdcf72021e13a5ef6fcae4798d2 480 Gene3D G3DSA:3.30.70.270 300 466 9.3E-41 T 14-10-2018 DA442_17680 87c27fdcf72021e13a5ef6fcae4798d2 480 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 309 462 5.0E-30 T 14-10-2018 IPR000160 GGDEF domain DA442_11515 2093ebdc4c0232c24a2b4eae1fd352af 316 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 227 315 1.2E-34 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DA442_11515 2093ebdc4c0232c24a2b4eae1fd352af 316 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 316 4.7E-146 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DA442_11515 2093ebdc4c0232c24a2b4eae1fd352af 316 SUPERFAMILY SSF53901 3 315 7.49E-73 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DA442_11515 2093ebdc4c0232c24a2b4eae1fd352af 316 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 316 73.093 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DA442_11515 2093ebdc4c0232c24a2b4eae1fd352af 316 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 8.7E-32 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DA442_11515 2093ebdc4c0232c24a2b4eae1fd352af 316 Gene3D G3DSA:3.40.47.10 1 316 8.6E-128 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DA442_15325 d1a5177125de16181a5a9de809200dfe 362 Gene3D G3DSA:1.25.40.10 135 357 4.1E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_15325 d1a5177125de16181a5a9de809200dfe 362 SMART SM00028 208 241 4.1 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_15325 d1a5177125de16181a5a9de809200dfe 362 SMART SM00028 274 307 37.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_15325 d1a5177125de16181a5a9de809200dfe 362 SMART SM00028 174 207 48.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_15325 d1a5177125de16181a5a9de809200dfe 362 SUPERFAMILY SSF48452 179 335 3.3E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_20870 5251add862b33243942f49d4f7700223 161 Pfam PF12838 4Fe-4S dicluster domain 35 78 1.2E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DA442_20870 5251add862b33243942f49d4f7700223 161 Pfam PF12838 4Fe-4S dicluster domain 106 151 2.4E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DA442_20870 5251add862b33243942f49d4f7700223 161 Hamap MF_02201 Ferredoxin-type protein NapF [napF]. 23 160 23.766 T 14-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 DA442_20870 5251add862b33243942f49d4f7700223 161 Gene3D G3DSA:3.30.70.20 92 158 1.2E-9 T 14-10-2018 DA442_20870 5251add862b33243942f49d4f7700223 161 Gene3D G3DSA:3.30.70.20 30 82 1.9E-10 T 14-10-2018 DA442_20870 5251add862b33243942f49d4f7700223 161 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 16 154 9.8E-43 T 14-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 DA442_20870 5251add862b33243942f49d4f7700223 161 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 139 150 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DA442_20870 5251add862b33243942f49d4f7700223 161 SUPERFAMILY SSF54862 32 158 1.67E-18 T 14-10-2018 DA442_11665 ccb74bf723d39b610e1c9049eefa485f 714 Gene3D G3DSA:3.40.1390.20 225 365 1.1E-12 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily DA442_11665 ccb74bf723d39b610e1c9049eefa485f 714 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 406 706 5.2E-132 T 14-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 DA442_11665 ccb74bf723d39b610e1c9049eefa485f 714 Gene3D G3DSA:3.40.50.300 5 217 4.6E-14 T 14-10-2018 DA442_11665 ccb74bf723d39b610e1c9049eefa485f 714 SUPERFAMILY SSF75138 229 353 1.18E-23 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily DA442_11665 ccb74bf723d39b610e1c9049eefa485f 714 Pfam PF07085 DRTGG domain 233 344 7.6E-27 T 14-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 DA442_11665 ccb74bf723d39b610e1c9049eefa485f 714 Pfam PF13500 AAA domain 3 229 3.8E-51 T 14-10-2018 DA442_11665 ccb74bf723d39b610e1c9049eefa485f 714 PIRSF PIRSF006107 1 714 0.0 T 14-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 DA442_11665 ccb74bf723d39b610e1c9049eefa485f 714 SUPERFAMILY SSF53659 392 709 2.22E-96 T 14-10-2018 DA442_11665 ccb74bf723d39b610e1c9049eefa485f 714 SUPERFAMILY SSF52540 1 240 1.33E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_11665 ccb74bf723d39b610e1c9049eefa485f 714 Gene3D G3DSA:3.40.50.10950 398 709 6.1E-134 T 14-10-2018 DA442_11665 ccb74bf723d39b610e1c9049eefa485f 714 Pfam PF01515 Phosphate acetyl/butaryl transferase 391 706 1.4E-125 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 DA442_11665 ccb74bf723d39b610e1c9049eefa485f 714 Gene3D G3DSA:3.40.50.10750 529 682 6.1E-134 T 14-10-2018 DA442_24425 df93a9701bcb44e9b3f9d6bde11da662 234 Pfam PF07702 UTRA domain 86 224 5.4E-36 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DA442_24425 df93a9701bcb44e9b3f9d6bde11da662 234 SUPERFAMILY SSF46785 3 69 1.21E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_24425 df93a9701bcb44e9b3f9d6bde11da662 234 Gene3D G3DSA:1.10.10.10 2 69 5.6E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_24425 df93a9701bcb44e9b3f9d6bde11da662 234 Gene3D G3DSA:3.40.1410.10 70 228 1.9E-34 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DA442_24425 df93a9701bcb44e9b3f9d6bde11da662 234 SMART SM00866 86 225 1.7E-31 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DA442_24425 df93a9701bcb44e9b3f9d6bde11da662 234 SUPERFAMILY SSF64288 53 229 3.93E-40 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DA442_24425 df93a9701bcb44e9b3f9d6bde11da662 234 SMART SM00345 6 65 4.1E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_24425 df93a9701bcb44e9b3f9d6bde11da662 234 TIGRFAM TIGR03337 phnR: phosphonate utilization transcriptional regulator PhnR 2 230 4.9E-120 T 14-10-2018 IPR017722 Phosphonate utilization transcriptional regulator PhnR DA442_24425 df93a9701bcb44e9b3f9d6bde11da662 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 65 4.7E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_24425 df93a9701bcb44e9b3f9d6bde11da662 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 25 39 3.0E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_24425 df93a9701bcb44e9b3f9d6bde11da662 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 55 3.0E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_10980 1df16027c81df419de031db6ea97d473 106 SUPERFAMILY SSF102816 3 105 1.27E-49 T 14-10-2018 IPR036763 Putative dsDNA mimic superfamily DA442_10980 1df16027c81df419de031db6ea97d473 106 Gene3D G3DSA:3.10.450.140 5 105 9.6E-43 T 14-10-2018 IPR036763 Putative dsDNA mimic superfamily DA442_10980 1df16027c81df419de031db6ea97d473 106 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 8 104 1.0E-50 T 14-10-2018 IPR007376 dsDNA mimic, putative DA442_10980 1df16027c81df419de031db6ea97d473 106 Pfam PF04269 Protein of unknown function, DUF440 5 105 1.7E-45 T 14-10-2018 IPR007376 dsDNA mimic, putative DA442_10980 1df16027c81df419de031db6ea97d473 106 PIRSF PIRSF004916 1 105 4.4E-53 T 14-10-2018 IPR007376 dsDNA mimic, putative DA442_10980 1df16027c81df419de031db6ea97d473 106 Hamap MF_00680 UPF0263 protein YciU [yciU]. 1 106 36.277 T 14-10-2018 IPR007376 dsDNA mimic, putative DA442_14955 611465d5191c6e157fed503d297a2b52 417 Pfam PF11871 Domain of unknown function (DUF3391) 4 137 1.4E-30 T 14-10-2018 IPR021812 Protein of unknown function DUF3391 DA442_14955 611465d5191c6e157fed503d297a2b52 417 Pfam PF01966 HD domain 170 290 5.6E-16 T 14-10-2018 IPR006674 HD domain DA442_14955 611465d5191c6e157fed503d297a2b52 417 SMART SM00471 164 300 2.0E-8 T 14-10-2018 IPR003607 HD/PDEase domain DA442_14955 611465d5191c6e157fed503d297a2b52 417 SUPERFAMILY SSF109604 160 330 7.07E-27 T 14-10-2018 DA442_14955 611465d5191c6e157fed503d297a2b52 417 Gene3D G3DSA:1.10.3210.10 21 330 1.8E-55 T 14-10-2018 DA442_07495 d086f427a6be0c9a49654aad53355216 324 SUPERFAMILY SSF51261 63 296 1.15E-55 T 14-10-2018 IPR011055 Duplicated hybrid motif DA442_07495 d086f427a6be0c9a49654aad53355216 324 Gene3D G3DSA:2.70.70.10 169 296 5.9E-43 T 14-10-2018 IPR011055 Duplicated hybrid motif DA442_07495 d086f427a6be0c9a49654aad53355216 324 Pfam PF01551 Peptidase family M23 198 291 2.2E-30 T 14-10-2018 IPR016047 Peptidase M23 DA442_07495 d086f427a6be0c9a49654aad53355216 324 Gene3D G3DSA:3.10.450.350 69 166 4.2E-10 T 14-10-2018 DA442_16520 46944d3f60bc25eb195344475abe7389 375 SUPERFAMILY SSF54631 181 315 1.3E-26 T 14-10-2018 DA442_16520 46944d3f60bc25eb195344475abe7389 375 Pfam PF00571 CBS domain 262 313 8.0E-6 T 14-10-2018 IPR000644 CBS domain DA442_16520 46944d3f60bc25eb195344475abe7389 375 Pfam PF01595 Domain of unknown function DUF21 9 177 3.4E-30 T 14-10-2018 IPR002550 CNNM, transmembrane domain DA442_16520 46944d3f60bc25eb195344475abe7389 375 Gene3D G3DSA:3.10.580.10 186 315 3.1E-42 T 14-10-2018 DA442_16250 916f96636d5bb9b687971412eb1bb51d 202 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 92 195 2.1E-39 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DA442_16250 916f96636d5bb9b687971412eb1bb51d 202 SUPERFAMILY SSF46609 1 86 2.36E-30 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DA442_16250 916f96636d5bb9b687971412eb1bb51d 202 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 85 6.1E-28 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DA442_16250 916f96636d5bb9b687971412eb1bb51d 202 Gene3D G3DSA:1.10.287.990 20 83 1.5E-24 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DA442_16250 916f96636d5bb9b687971412eb1bb51d 202 SUPERFAMILY SSF54719 88 200 2.49E-43 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DA442_16250 916f96636d5bb9b687971412eb1bb51d 202 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 163 170 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DA442_16250 916f96636d5bb9b687971412eb1bb51d 202 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.1E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DA442_16250 916f96636d5bb9b687971412eb1bb51d 202 PRINTS PR01703 Manganese superoxide dismutase signature 68 81 1.1E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DA442_16250 916f96636d5bb9b687971412eb1bb51d 202 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.1E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DA442_16250 916f96636d5bb9b687971412eb1bb51d 202 PRINTS PR01703 Manganese superoxide dismutase signature 161 173 1.1E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DA442_16250 916f96636d5bb9b687971412eb1bb51d 202 PRINTS PR01703 Manganese superoxide dismutase signature 121 129 1.1E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DA442_16250 916f96636d5bb9b687971412eb1bb51d 202 Gene3D G3DSA:2.40.500.20 84 201 1.2E-47 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DA442_16250 916f96636d5bb9b687971412eb1bb51d 202 PIRSF PIRSF000349 1 202 3.3E-80 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DA442_15660 74be6b7c61ed4059941f65d6242b1682 624 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 40.612 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DA442_15660 74be6b7c61ed4059941f65d6242b1682 624 Pfam PF00583 Acetyltransferase (GNAT) family 500 568 1.0E-8 T 14-10-2018 IPR000182 GNAT domain DA442_15660 74be6b7c61ed4059941f65d6242b1682 624 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 9.3E-68 T 14-10-2018 DA442_15660 74be6b7c61ed4059941f65d6242b1682 624 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 9.3E-68 T 14-10-2018 DA442_15660 74be6b7c61ed4059941f65d6242b1682 624 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 9.3E-68 T 14-10-2018 DA442_15660 74be6b7c61ed4059941f65d6242b1682 624 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 9.3E-68 T 14-10-2018 DA442_15660 74be6b7c61ed4059941f65d6242b1682 624 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 9.3E-68 T 14-10-2018 DA442_15660 74be6b7c61ed4059941f65d6242b1682 624 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 9.3E-68 T 14-10-2018 DA442_15660 74be6b7c61ed4059941f65d6242b1682 624 Gene3D G3DSA:3.40.630.30 462 604 2.9E-25 T 14-10-2018 DA442_15660 74be6b7c61ed4059941f65d6242b1682 624 PIRSF PIRSF036456 1 624 0.0 T 14-10-2018 IPR011244 Bifunctional argininosuccinate lyase/acetyltransferase GO:0004056|GO:0005737|GO:0006526|GO:0016746 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DA442_15660 74be6b7c61ed4059941f65d6242b1682 624 SUPERFAMILY SSF55729 466 584 7.85E-16 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_15660 74be6b7c61ed4059941f65d6242b1682 624 Gene3D G3DSA:1.10.275.10 1 107 2.1E-36 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal DA442_15660 74be6b7c61ed4059941f65d6242b1682 624 Pfam PF00206 Lyase 6 301 3.5E-89 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal DA442_15660 74be6b7c61ed4059941f65d6242b1682 624 Gene3D G3DSA:1.10.40.30 363 433 3.5E-148 T 14-10-2018 DA442_15660 74be6b7c61ed4059941f65d6242b1682 624 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 DA442_15660 74be6b7c61ed4059941f65d6242b1682 624 SUPERFAMILY SSF48557 3 456 4.71E-142 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 DA442_15660 74be6b7c61ed4059941f65d6242b1682 624 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 8.1E-204 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DA442_15660 74be6b7c61ed4059941f65d6242b1682 624 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 6.1E-25 T 14-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DA442_15660 74be6b7c61ed4059941f65d6242b1682 624 Gene3D G3DSA:1.20.200.10 108 446 3.5E-148 T 14-10-2018 DA442_15660 74be6b7c61ed4059941f65d6242b1682 624 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 5.5E-28 T 14-10-2018 IPR000362 Fumarate lyase family DA442_15660 74be6b7c61ed4059941f65d6242b1682 624 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 5.5E-28 T 14-10-2018 IPR000362 Fumarate lyase family DA442_15660 74be6b7c61ed4059941f65d6242b1682 624 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 5.5E-28 T 14-10-2018 IPR000362 Fumarate lyase family DA442_15660 74be6b7c61ed4059941f65d6242b1682 624 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 5.5E-28 T 14-10-2018 IPR000362 Fumarate lyase family DA442_22620 ed9cdd1bc892252c11bd844e731c624e 536 SUPERFAMILY SSF51011 456 533 3.86E-8 T 14-10-2018 DA442_22620 ed9cdd1bc892252c11bd844e731c624e 536 Gene3D G3DSA:3.20.20.80 192 422 8.8E-31 T 14-10-2018 DA442_22620 ed9cdd1bc892252c11bd844e731c624e 536 Gene3D G3DSA:3.20.20.80 51 181 4.4E-38 T 14-10-2018 DA442_22620 ed9cdd1bc892252c11bd844e731c624e 536 SMART SM00642 61 447 8.2E-34 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DA442_22620 ed9cdd1bc892252c11bd844e731c624e 536 Gene3D G3DSA:2.60.40.1180 450 533 3.3E-6 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta DA442_22620 ed9cdd1bc892252c11bd844e731c624e 536 SUPERFAMILY SSF51445 55 457 3.43E-67 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DA442_22620 ed9cdd1bc892252c11bd844e731c624e 536 Pfam PF00128 Alpha amylase, catalytic domain 205 390 2.2E-14 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DA442_22620 ed9cdd1bc892252c11bd844e731c624e 536 Pfam PF00128 Alpha amylase, catalytic domain 87 173 1.6E-26 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DA442_24030 0a364538f97c0d7bdb4b9039b77d83ff 308 Gene3D G3DSA:3.40.50.1980 32 180 2.6E-31 T 14-10-2018 DA442_24030 0a364538f97c0d7bdb4b9039b77d83ff 308 PRINTS PR00691 Adhesin B signature 128 147 3.7E-8 T 14-10-2018 IPR006129 Adhesin B GO:0007155 DA442_24030 0a364538f97c0d7bdb4b9039b77d83ff 308 PRINTS PR00691 Adhesin B signature 53 71 3.7E-8 T 14-10-2018 IPR006129 Adhesin B GO:0007155 DA442_24030 0a364538f97c0d7bdb4b9039b77d83ff 308 PRINTS PR00691 Adhesin B signature 72 91 3.7E-8 T 14-10-2018 IPR006129 Adhesin B GO:0007155 DA442_24030 0a364538f97c0d7bdb4b9039b77d83ff 308 PRINTS PR00691 Adhesin B signature 28 49 3.7E-8 T 14-10-2018 IPR006129 Adhesin B GO:0007155 DA442_24030 0a364538f97c0d7bdb4b9039b77d83ff 308 PRINTS PR00691 Adhesin B signature 235 252 3.7E-8 T 14-10-2018 IPR006129 Adhesin B GO:0007155 DA442_24030 0a364538f97c0d7bdb4b9039b77d83ff 308 Gene3D G3DSA:3.40.50.1980 191 297 1.9E-20 T 14-10-2018 DA442_24030 0a364538f97c0d7bdb4b9039b77d83ff 308 Pfam PF01297 Zinc-uptake complex component A periplasmic 34 295 2.4E-45 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 DA442_24030 0a364538f97c0d7bdb4b9039b77d83ff 308 PRINTS PR00690 Adhesin family signature 72 89 1.4E-7 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DA442_24030 0a364538f97c0d7bdb4b9039b77d83ff 308 PRINTS PR00690 Adhesin family signature 239 257 1.4E-7 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DA442_24030 0a364538f97c0d7bdb4b9039b77d83ff 308 PRINTS PR00690 Adhesin family signature 59 72 1.4E-7 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DA442_24030 0a364538f97c0d7bdb4b9039b77d83ff 308 PRINTS PR00690 Adhesin family signature 186 207 1.4E-7 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DA442_24030 0a364538f97c0d7bdb4b9039b77d83ff 308 SUPERFAMILY SSF53807 27 297 8.34E-63 T 14-10-2018 DA442_14650 5aff7d04372f20f546bca49213321a04 197 SUPERFAMILY SSF100950 5 195 1.81E-57 T 14-10-2018 IPR037171 NagB/RpiA transferase-like DA442_14650 5aff7d04372f20f546bca49213321a04 197 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 7 189 3.0E-43 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase DA442_14650 5aff7d04372f20f546bca49213321a04 197 Gene3D G3DSA:3.40.50.10420 2 196 9.2E-57 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily DA442_14650 5aff7d04372f20f546bca49213321a04 197 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 6 189 3.8E-52 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase DA442_14650 5aff7d04372f20f546bca49213321a04 197 PIRSF PIRSF006806 3 192 7.4E-37 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase DA442_13975 8b831f9a2af327bbe3be08119cb9dfe3 395 Gene3D G3DSA:3.10.290.10 326 394 1.3E-14 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DA442_13975 8b831f9a2af327bbe3be08119cb9dfe3 395 Gene3D G3DSA:1.10.240.10 218 325 2.9E-35 T 14-10-2018 DA442_13975 8b831f9a2af327bbe3be08119cb9dfe3 395 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 394 48.308 T 14-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 DA442_13975 8b831f9a2af327bbe3be08119cb9dfe3 395 SUPERFAMILY SSF52374 6 316 1.08E-98 T 14-10-2018 DA442_13975 8b831f9a2af327bbe3be08119cb9dfe3 395 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DA442_13975 8b831f9a2af327bbe3be08119cb9dfe3 395 Pfam PF00579 tRNA synthetases class I (W and Y) 30 316 1.3E-79 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 DA442_13975 8b831f9a2af327bbe3be08119cb9dfe3 395 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 395 1.1E-126 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DA442_13975 8b831f9a2af327bbe3be08119cb9dfe3 395 SUPERFAMILY SSF55174 297 394 8.98E-16 T 14-10-2018 DA442_13975 8b831f9a2af327bbe3be08119cb9dfe3 395 Gene3D G3DSA:3.40.50.620 5 217 6.3E-73 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DA442_13975 8b831f9a2af327bbe3be08119cb9dfe3 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 1.3E-24 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DA442_13975 8b831f9a2af327bbe3be08119cb9dfe3 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 1.3E-24 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DA442_13975 8b831f9a2af327bbe3be08119cb9dfe3 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 1.3E-24 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DA442_13975 8b831f9a2af327bbe3be08119cb9dfe3 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 1.3E-24 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DA442_04235 bdb1d7b7e466aa4fea049f5df8ceb888 305 SMART SM00244 22 180 1.9E-58 T 14-10-2018 IPR001107 Band 7 domain DA442_04235 bdb1d7b7e466aa4fea049f5df8ceb888 305 Gene3D G3DSA:3.30.479.30 50 182 3.0E-42 T 14-10-2018 DA442_04235 bdb1d7b7e466aa4fea049f5df8ceb888 305 Pfam PF01145 SPFH domain / Band 7 family 26 195 4.9E-34 T 14-10-2018 IPR001107 Band 7 domain DA442_04235 bdb1d7b7e466aa4fea049f5df8ceb888 305 PRINTS PR00721 Stomatin signature 77 98 3.5E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 DA442_04235 bdb1d7b7e466aa4fea049f5df8ceb888 305 PRINTS PR00721 Stomatin signature 132 155 3.5E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 DA442_04235 bdb1d7b7e466aa4fea049f5df8ceb888 305 PRINTS PR00721 Stomatin signature 156 174 3.5E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 DA442_04235 bdb1d7b7e466aa4fea049f5df8ceb888 305 PRINTS PR00721 Stomatin signature 112 129 3.5E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 DA442_04235 bdb1d7b7e466aa4fea049f5df8ceb888 305 PRINTS PR00721 Stomatin signature 175 196 3.5E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 DA442_04235 bdb1d7b7e466aa4fea049f5df8ceb888 305 ProSitePatterns PS01270 Band 7 protein family signature. 136 164 - T 14-10-2018 IPR018080 Band 7/stomatin-like, conserved site DA442_04235 bdb1d7b7e466aa4fea049f5df8ceb888 305 SUPERFAMILY SSF117892 53 187 1.7E-40 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily DA442_04235 bdb1d7b7e466aa4fea049f5df8ceb888 305 Pfam PF16200 C-terminal region of band_7 242 303 1.9E-7 T 14-10-2018 IPR032435 Band 7, C-terminal extension Reactome: R-HSA-8949664 DA442_21405 be69d51e41ad30ba2e758f3f2bc09900 269 SUPERFAMILY SSF81345 42 245 6.28E-11 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DA442_21405 be69d51e41ad30ba2e758f3f2bc09900 269 Pfam PF00950 ABC 3 transport family 6 252 3.2E-9 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 DA442_14690 53688fd63b46e10afbbf3d8ecb06cd75 358 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 171 182 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DA442_14690 53688fd63b46e10afbbf3d8ecb06cd75 358 Gene3D G3DSA:3.20.20.70 2 358 9.1E-148 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_14690 53688fd63b46e10afbbf3d8ecb06cd75 358 PIRSF PIRSF001359 13 358 7.2E-94 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DA442_14690 53688fd63b46e10afbbf3d8ecb06cd75 358 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 357 1.5E-180 T 14-10-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 DA442_14690 53688fd63b46e10afbbf3d8ecb06cd75 358 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 354 1.7E-90 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DA442_14690 53688fd63b46e10afbbf3d8ecb06cd75 358 SUPERFAMILY SSF51569 4 356 5.68E-132 T 14-10-2018 DA442_14690 53688fd63b46e10afbbf3d8ecb06cd75 358 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 100 111 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DA442_14690 53688fd63b46e10afbbf3d8ecb06cd75 358 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 356 3.3E-111 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DA442_22255 ba8d8467e27e67e4e61d086bd155bacb 807 TIGRFAM TIGR01774 PFL2-3: glycyl radical enzyme, PFL2/glycerol dehydratase family 6 807 0.0 T 14-10-2018 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 DA442_22255 ba8d8467e27e67e4e61d086bd155bacb 807 Pfam PF01228 Glycine radical 685 788 1.4E-30 T 14-10-2018 IPR001150 Glycine radical domain GO:0003824 DA442_22255 ba8d8467e27e67e4e61d086bd155bacb 807 Pfam PF02901 Pyruvate formate lyase-like 8 668 1.1E-219 T 14-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 DA442_22255 ba8d8467e27e67e4e61d086bd155bacb 807 SUPERFAMILY SSF51998 4 806 7.78E-223 T 14-10-2018 DA442_22255 ba8d8467e27e67e4e61d086bd155bacb 807 PIRSF PIRSF000379 10 807 1.1E-168 T 14-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 DA442_22255 ba8d8467e27e67e4e61d086bd155bacb 807 ProSitePatterns PS00850 Glycine radical domain signature. 778 786 - T 14-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site DA442_22255 ba8d8467e27e67e4e61d086bd155bacb 807 Gene3D G3DSA:3.20.70.20 7 807 1.1E-278 T 14-10-2018 DA442_19670 bdc412de24c59b231b99bc5c0a4ff30d 144 Gene3D G3DSA:2.20.28.140 2 37 3.1E-13 T 14-10-2018 DA442_19670 bdc412de24c59b231b99bc5c0a4ff30d 144 Pfam PF00085 Thioredoxin 45 140 2.6E-27 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 DA442_19670 bdc412de24c59b231b99bc5c0a4ff30d 144 Gene3D G3DSA:3.40.30.10 41 144 6.5E-32 T 14-10-2018 DA442_19670 bdc412de24c59b231b99bc5c0a4ff30d 144 PIRSF PIRSF000077 38 142 5.6E-32 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 DA442_19670 bdc412de24c59b231b99bc5c0a4ff30d 144 TIGRFAM TIGR01068 thioredoxin: thioredoxin 46 141 1.6E-34 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 DA442_19670 bdc412de24c59b231b99bc5c0a4ff30d 144 PRINTS PR00421 Thioredoxin family signature 106 117 5.0E-8 T 14-10-2018 DA442_19670 bdc412de24c59b231b99bc5c0a4ff30d 144 PRINTS PR00421 Thioredoxin family signature 58 66 5.0E-8 T 14-10-2018 DA442_19670 bdc412de24c59b231b99bc5c0a4ff30d 144 PRINTS PR00421 Thioredoxin family signature 66 75 5.0E-8 T 14-10-2018 DA442_19670 bdc412de24c59b231b99bc5c0a4ff30d 144 SUPERFAMILY SSF52833 28 142 4.9E-37 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_01760 ef99383015c803bec86cced4a5668eac 311 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 57.449 T 14-10-2018 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 DA442_01760 ef99383015c803bec86cced4a5668eac 311 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 309 1.9E-50 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 DA442_01760 ef99383015c803bec86cced4a5668eac 311 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 1.7E-47 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 DA442_01760 ef99383015c803bec86cced4a5668eac 311 PIRSF PIRSF000102 1 307 1.1E-62 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DA442_01760 ef99383015c803bec86cced4a5668eac 311 SUPERFAMILY SSF51735 1 145 5.57E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_01760 ef99383015c803bec86cced4a5668eac 311 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 310 9.7E-130 T 14-10-2018 IPR010097 Malate dehydrogenase, type 1 GO:0006099|GO:0030060 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 DA442_01760 ef99383015c803bec86cced4a5668eac 311 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 14-10-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 DA442_01760 ef99383015c803bec86cced4a5668eac 311 Gene3D G3DSA:3.40.50.720 1 146 6.6E-66 T 14-10-2018 DA442_01760 ef99383015c803bec86cced4a5668eac 311 Gene3D G3DSA:3.90.110.10 147 311 1.5E-55 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DA442_01760 ef99383015c803bec86cced4a5668eac 311 SUPERFAMILY SSF56327 147 309 5.71E-44 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DA442_05680 326bb5dbc8f43917cd6ffffb39abc121 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 6.2E-22 T 14-10-2018 DA442_05680 326bb5dbc8f43917cd6ffffb39abc121 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 9.1E-23 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DA442_05680 326bb5dbc8f43917cd6ffffb39abc121 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 9.1E-23 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DA442_05680 326bb5dbc8f43917cd6ffffb39abc121 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 9.1E-23 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DA442_05680 326bb5dbc8f43917cd6ffffb39abc121 164 Gene3D G3DSA:1.10.10.10 1 63 5.8E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_05680 326bb5dbc8f43917cd6ffffb39abc121 164 SMART SM00344 12 121 3.2E-55 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DA442_05680 326bb5dbc8f43917cd6ffffb39abc121 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DA442_05680 326bb5dbc8f43917cd6ffffb39abc121 164 SUPERFAMILY SSF54909 74 157 1.02E-21 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel DA442_05680 326bb5dbc8f43917cd6ffffb39abc121 164 Gene3D G3DSA:3.30.70.920 64 159 5.0E-24 T 14-10-2018 DA442_05680 326bb5dbc8f43917cd6ffffb39abc121 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 1.6E-23 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DA442_05680 326bb5dbc8f43917cd6ffffb39abc121 164 SUPERFAMILY SSF46785 12 70 2.33E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_05925 4e3763fd3c53ede38b2cb3989c3959ea 275 Pfam PF13460 NAD(P)H-binding 9 188 8.0E-14 T 14-10-2018 IPR016040 NAD(P)-binding domain DA442_05925 4e3763fd3c53ede38b2cb3989c3959ea 275 SUPERFAMILY SSF51735 8 268 8.99E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_05925 4e3763fd3c53ede38b2cb3989c3959ea 275 Gene3D G3DSA:3.40.50.720 1 275 3.6E-45 T 14-10-2018 DA442_15635 8f10390f6ffa66dbcce56198d84cbbbd 856 Pfam PF00905 Penicillin binding protein transpeptidase domain 438 610 6.4E-22 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DA442_15635 8f10390f6ffa66dbcce56198d84cbbbd 856 Pfam PF00912 Transglycosylase 55 229 3.4E-63 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DA442_15635 8f10390f6ffa66dbcce56198d84cbbbd 856 Pfam PF17092 Penicillin-binding protein OB-like domain 317 434 5.4E-33 T 14-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DA442_15635 8f10390f6ffa66dbcce56198d84cbbbd 856 Gene3D G3DSA:1.10.3810.10 48 242 8.1E-78 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DA442_15635 8f10390f6ffa66dbcce56198d84cbbbd 856 Gene3D G3DSA:3.40.710.10 243 334 1.4E-9 T 14-10-2018 DA442_15635 8f10390f6ffa66dbcce56198d84cbbbd 856 SUPERFAMILY SSF53955 43 256 9.0E-78 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily DA442_15635 8f10390f6ffa66dbcce56198d84cbbbd 856 SUPERFAMILY SSF56601 211 836 7.22E-113 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DA442_15635 8f10390f6ffa66dbcce56198d84cbbbd 856 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 786 3.8E-168 T 14-10-2018 DA442_09715 e8b05da40b79bc35b36c50e6f7e664ad 126 Pfam PF12680 SnoaL-like domain 11 105 3.8E-9 T 14-10-2018 IPR037401 SnoaL-like domain DA442_09715 e8b05da40b79bc35b36c50e6f7e664ad 126 Gene3D G3DSA:3.10.450.50 3 126 1.1E-30 T 14-10-2018 DA442_09715 e8b05da40b79bc35b36c50e6f7e664ad 126 SUPERFAMILY SSF54427 4 125 2.63E-30 T 14-10-2018 IPR032710 NTF2-like domain superfamily DA442_03975 d6ccc3162a5b36837361557f801187ea 883 Gene3D G3DSA:2.60.40.10 818 882 7.8E-24 T 14-10-2018 IPR013783 Immunoglobulin-like fold DA442_03975 d6ccc3162a5b36837361557f801187ea 883 Pfam PF03173 Putative carbohydrate binding domain 35 193 1.4E-62 T 14-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 DA442_03975 d6ccc3162a5b36837361557f801187ea 883 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 804 879 7.4E-28 T 14-10-2018 IPR004867 Chitobiase C-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 DA442_03975 d6ccc3162a5b36837361557f801187ea 883 SUPERFAMILY SSF55545 208 331 7.63E-23 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 DA442_03975 d6ccc3162a5b36837361557f801187ea 883 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 211 329 5.4E-13 T 14-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal DA442_03975 d6ccc3162a5b36837361557f801187ea 883 SUPERFAMILY SSF81296 781 882 3.22E-37 T 14-10-2018 IPR014756 Immunoglobulin E-set DA442_03975 d6ccc3162a5b36837361557f801187ea 883 Gene3D G3DSA:3.30.379.10 205 329 3.0E-23 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 DA442_03975 d6ccc3162a5b36837361557f801187ea 883 SMART SM01081 34 195 1.4E-93 T 14-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 DA442_03975 d6ccc3162a5b36837361557f801187ea 883 SUPERFAMILY SSF51445 332 772 2.82E-143 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DA442_03975 d6ccc3162a5b36837361557f801187ea 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 326 343 6.6E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 DA442_03975 d6ccc3162a5b36837361557f801187ea 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 355 376 6.6E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 DA442_03975 d6ccc3162a5b36837361557f801187ea 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 728 744 6.6E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 DA442_03975 d6ccc3162a5b36837361557f801187ea 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 746 763 6.6E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 DA442_03975 d6ccc3162a5b36837361557f801187ea 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 432 449 6.6E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 DA442_03975 d6ccc3162a5b36837361557f801187ea 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 526 539 6.6E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 DA442_03975 d6ccc3162a5b36837361557f801187ea 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 292 312 6.6E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 DA442_03975 d6ccc3162a5b36837361557f801187ea 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 499 517 6.6E-48 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 DA442_03975 d6ccc3162a5b36837361557f801187ea 883 Gene3D G3DSA:2.60.40.290 25 167 1.6E-55 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 DA442_03975 d6ccc3162a5b36837361557f801187ea 883 Gene3D G3DSA:3.20.20.80 330 817 5.5E-165 T 14-10-2018 DA442_03975 d6ccc3162a5b36837361557f801187ea 883 SUPERFAMILY SSF49384 26 198 2.07E-65 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 DA442_03975 d6ccc3162a5b36837361557f801187ea 883 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 332 764 1.0E-108 T 14-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 DA442_13740 047fe0404ccc7669e9228ffbf9bbb464 194 Pfam PF08747 Domain of unknown function (DUF1788) 65 186 1.0E-34 T 14-10-2018 IPR014858 Protein of unknown function DUF1788 DA442_12155 55384443644be1bef0ec1d18c4f9aa03 377 SUPERFAMILY SSF51735 93 258 9.87E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_12155 55384443644be1bef0ec1d18c4f9aa03 377 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 257 1.4E-33 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 DA442_12155 55384443644be1bef0ec1d18c4f9aa03 377 Gene3D G3DSA:3.30.1370.170 294 377 3.0E-31 T 14-10-2018 IPR038251 PdxB, dimerisation domain superfamily KEGG: 00750+1.1.1.290 DA442_12155 55384443644be1bef0ec1d18c4f9aa03 377 SUPERFAMILY SSF52283 1 109 1.51E-23 T 14-10-2018 DA442_12155 55384443644be1bef0ec1d18c4f9aa03 377 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 198 214 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DA442_12155 55384443644be1bef0ec1d18c4f9aa03 377 Gene3D G3DSA:3.40.50.720 1 279 1.5E-112 T 14-10-2018 DA442_12155 55384443644be1bef0ec1d18c4f9aa03 377 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 358 45.195 T 14-10-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00750+1.1.1.290 DA442_12155 55384443644be1bef0ec1d18c4f9aa03 377 Gene3D G3DSA:3.40.50.720 93 258 1.5E-112 T 14-10-2018 DA442_12155 55384443644be1bef0ec1d18c4f9aa03 377 Pfam PF11890 Domain of unknown function (DUF3410) 290 370 3.4E-27 T 14-10-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00750+1.1.1.290 DA442_12155 55384443644be1bef0ec1d18c4f9aa03 377 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 7 285 1.2E-23 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 DA442_11975 159f7a7c412671e303d7ae823fd6252f 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_11975 159f7a7c412671e303d7ae823fd6252f 331 Gene3D G3DSA:3.30.360.10 149 314 7.6E-156 T 14-10-2018 DA442_11975 159f7a7c412671e303d7ae823fd6252f 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 3.5E-70 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_11975 159f7a7c412671e303d7ae823fd6252f 331 SMART SM00846 3 150 2.3E-97 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_11975 159f7a7c412671e303d7ae823fd6252f 331 PIRSF PIRSF000149 1 331 1.0E-135 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_11975 159f7a7c412671e303d7ae823fd6252f 331 Gene3D G3DSA:3.40.50.720 4 326 7.6E-156 T 14-10-2018 DA442_11975 159f7a7c412671e303d7ae823fd6252f 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 7.7E-47 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_11975 159f7a7c412671e303d7ae823fd6252f 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 7.7E-47 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_11975 159f7a7c412671e303d7ae823fd6252f 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 7.7E-47 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_11975 159f7a7c412671e303d7ae823fd6252f 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 7.7E-47 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_11975 159f7a7c412671e303d7ae823fd6252f 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 7.7E-47 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_11975 159f7a7c412671e303d7ae823fd6252f 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 3.0E-40 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_11975 159f7a7c412671e303d7ae823fd6252f 331 SUPERFAMILY SSF51735 3 166 2.5E-68 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_11975 159f7a7c412671e303d7ae823fd6252f 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 7.6E-138 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_11975 159f7a7c412671e303d7ae823fd6252f 331 SUPERFAMILY SSF55347 149 312 3.43E-78 T 14-10-2018 DA442_16215 fc88a466dec5efa4a4440f3587ba251c 460 Pfam PF01554 MatE 32 191 1.1E-25 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DA442_16215 fc88a466dec5efa4a4440f3587ba251c 460 Pfam PF01554 MatE 255 416 5.8E-24 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DA442_16215 fc88a466dec5efa4a4440f3587ba251c 460 TIGRFAM TIGR00797 matE: MATE efflux family protein 32 423 2.3E-57 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DA442_16215 fc88a466dec5efa4a4440f3587ba251c 460 PIRSF PIRSF006603 6 459 1.3E-131 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DA442_25605 b149172c36306ccbf9d077d9f6d7fc10 1422 Pfam PF00384 Molybdopterin oxidoreductase 786 1212 6.3E-90 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DA442_25605 b149172c36306ccbf9d077d9f6d7fc10 1422 SUPERFAMILY SSF51971 190 430 1.65E-63 T 14-10-2018 DA442_25605 b149172c36306ccbf9d077d9f6d7fc10 1422 Gene3D G3DSA:3.40.228.10 864 1065 6.6E-178 T 14-10-2018 DA442_25605 b149172c36306ccbf9d077d9f6d7fc10 1422 Pfam PF01568 Molydopterin dinucleotide binding domain 1295 1399 3.3E-29 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 DA442_25605 b149172c36306ccbf9d077d9f6d7fc10 1422 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 733 1403 1.4E-248 T 14-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 DA442_25605 b149172c36306ccbf9d077d9f6d7fc10 1422 Gene3D G3DSA:3.50.50.60 413 500 2.7E-6 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_25605 b149172c36306ccbf9d077d9f6d7fc10 1422 Gene3D G3DSA:3.40.50.740 791 1253 6.6E-178 T 14-10-2018 DA442_25605 b149172c36306ccbf9d077d9f6d7fc10 1422 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 729 782 2.1E-16 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DA442_25605 b149172c36306ccbf9d077d9f6d7fc10 1422 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 733 750 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 DA442_25605 b149172c36306ccbf9d077d9f6d7fc10 1422 SUPERFAMILY SSF54862 567 718 4.18E-19 T 14-10-2018 DA442_25605 b149172c36306ccbf9d077d9f6d7fc10 1422 Gene3D G3DSA:3.50.50.60 191 306 3.5E-34 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_25605 b149172c36306ccbf9d077d9f6d7fc10 1422 SUPERFAMILY SSF54292 1 98 7.87E-25 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DA442_25605 b149172c36306ccbf9d077d9f6d7fc10 1422 Gene3D G3DSA:3.50.50.60 307 406 1.3E-20 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_25605 b149172c36306ccbf9d077d9f6d7fc10 1422 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 1158 1175 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 DA442_25605 b149172c36306ccbf9d077d9f6d7fc10 1422 SUPERFAMILY SSF46548 88 200 1.26E-17 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DA442_25605 b149172c36306ccbf9d077d9f6d7fc10 1422 Gene3D G3DSA:1.10.1060.10 58 190 3.7E-25 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DA442_25605 b149172c36306ccbf9d077d9f6d7fc10 1422 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 96 175 2.8E-18 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 DA442_25605 b149172c36306ccbf9d077d9f6d7fc10 1422 Pfam PF00037 4Fe-4S binding domain 697 714 4.6E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DA442_25605 b149172c36306ccbf9d077d9f6d7fc10 1422 Pfam PF00037 4Fe-4S binding domain 633 654 1.3E-4 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DA442_25605 b149172c36306ccbf9d077d9f6d7fc10 1422 SUPERFAMILY SSF53706 724 1261 6.41E-205 T 14-10-2018 DA442_25605 b149172c36306ccbf9d077d9f6d7fc10 1422 Gene3D G3DSA:2.20.25.90 728 783 4.5E-20 T 14-10-2018 DA442_25605 b149172c36306ccbf9d077d9f6d7fc10 1422 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 75 3.9E-9 T 14-10-2018 DA442_25605 b149172c36306ccbf9d077d9f6d7fc10 1422 Gene3D G3DSA:2.40.40.20 1285 1405 2.2E-40 T 14-10-2018 DA442_25605 b149172c36306ccbf9d077d9f6d7fc10 1422 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 192 488 9.6E-33 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DA442_25605 b149172c36306ccbf9d077d9f6d7fc10 1422 SUPERFAMILY SSF50692 1263 1404 5.65E-40 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily DA442_25605 b149172c36306ccbf9d077d9f6d7fc10 1422 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 699 710 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DA442_25605 b149172c36306ccbf9d077d9f6d7fc10 1422 Gene3D G3DSA:3.30.70.20 619 717 1.6E-16 T 14-10-2018 DA442_25605 b149172c36306ccbf9d077d9f6d7fc10 1422 PRINTS PR00419 Adrenodoxin reductase family signature 192 214 6.5E-15 T 14-10-2018 DA442_25605 b149172c36306ccbf9d077d9f6d7fc10 1422 PRINTS PR00419 Adrenodoxin reductase family signature 215 228 6.5E-15 T 14-10-2018 DA442_25605 b149172c36306ccbf9d077d9f6d7fc10 1422 PRINTS PR00419 Adrenodoxin reductase family signature 323 337 6.5E-15 T 14-10-2018 DA442_25605 b149172c36306ccbf9d077d9f6d7fc10 1422 SMART SM00926 728 783 2.7E-18 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DA442_24745 3b5efbc2ea24b2e1cb68223609050e59 246 SMART SM01134 67 227 1.3E-45 T 14-10-2018 DA442_24745 3b5efbc2ea24b2e1cb68223609050e59 246 SMART SM00420 4 56 5.7E-20 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DA442_24745 3b5efbc2ea24b2e1cb68223609050e59 246 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 22 36 2.0E-6 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DA442_24745 3b5efbc2ea24b2e1cb68223609050e59 246 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 36 54 2.0E-6 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DA442_24745 3b5efbc2ea24b2e1cb68223609050e59 246 Pfam PF08220 DeoR-like helix-turn-helix domain 4 59 9.6E-17 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DA442_24745 3b5efbc2ea24b2e1cb68223609050e59 246 Gene3D G3DSA:1.10.10.10 1 52 1.8E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_24745 3b5efbc2ea24b2e1cb68223609050e59 246 SUPERFAMILY SSF46785 2 59 3.39E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_24745 3b5efbc2ea24b2e1cb68223609050e59 246 SUPERFAMILY SSF100950 70 227 3.03E-24 T 14-10-2018 IPR037171 NagB/RpiA transferase-like DA442_24745 3b5efbc2ea24b2e1cb68223609050e59 246 ProSitePatterns PS00894 DeoR-type HTH domain signature. 4 38 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 DA442_24745 3b5efbc2ea24b2e1cb68223609050e59 246 Pfam PF00455 DeoR C terminal sensor domain 72 226 8.0E-41 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain DA442_21040 a107920145a519b0a724c041eff48873 882 Pfam PF00072 Response regulator receiver domain 761 875 1.7E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_21040 a107920145a519b0a724c041eff48873 882 Gene3D G3DSA:3.30.565.10 446 611 6.7E-48 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_21040 a107920145a519b0a724c041eff48873 882 SUPERFAMILY SSF47384 367 448 4.12E-21 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DA442_21040 a107920145a519b0a724c041eff48873 882 Gene3D G3DSA:3.40.50.12330 751 816 4.3E-20 T 14-10-2018 DA442_21040 a107920145a519b0a724c041eff48873 882 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 495 609 1.3E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_21040 a107920145a519b0a724c041eff48873 882 SMART SM00387 494 611 1.6E-33 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_21040 a107920145a519b0a724c041eff48873 882 Gene3D G3DSA:1.10.287.130 348 445 1.0E-28 T 14-10-2018 DA442_21040 a107920145a519b0a724c041eff48873 882 SUPERFAMILY SSF52172 758 878 2.28E-35 T 14-10-2018 IPR011006 CheY-like superfamily DA442_21040 a107920145a519b0a724c041eff48873 882 SMART SM00448 759 876 1.2E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_21040 a107920145a519b0a724c041eff48873 882 PRINTS PR00344 Bacterial sensor protein C-terminal signature 554 564 2.0E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_21040 a107920145a519b0a724c041eff48873 882 PRINTS PR00344 Bacterial sensor protein C-terminal signature 571 589 2.0E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_21040 a107920145a519b0a724c041eff48873 882 PRINTS PR00344 Bacterial sensor protein C-terminal signature 595 608 2.0E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_21040 a107920145a519b0a724c041eff48873 882 PRINTS PR00344 Bacterial sensor protein C-terminal signature 536 550 2.0E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_21040 a107920145a519b0a724c041eff48873 882 SMART SM00388 382 447 6.9E-25 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_21040 a107920145a519b0a724c041eff48873 882 SUPERFAMILY SSF55874 436 607 2.1E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_21040 a107920145a519b0a724c041eff48873 882 Pfam PF00512 His Kinase A (phospho-acceptor) domain 383 447 1.0E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_21040 a107920145a519b0a724c041eff48873 882 Gene3D G3DSA:3.40.50.2300 817 880 1.2E-17 T 14-10-2018 DA442_09015 151e838636cedc33ddb4b3f1dfb48f1c 361 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 157 314 4.1E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DA442_09015 151e838636cedc33ddb4b3f1dfb48f1c 361 SUPERFAMILY SSF161098 136 318 3.92E-41 T 14-10-2018 IPR035906 MetI-like superfamily DA442_09015 151e838636cedc33ddb4b3f1dfb48f1c 361 Gene3D G3DSA:1.10.3720.10 132 321 1.9E-36 T 14-10-2018 IPR035906 MetI-like superfamily DA442_23170 199f4d2a631ad01dc2c78640fc01623e 219 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 127 155 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DA442_23170 199f4d2a631ad01dc2c78640fc01623e 219 SUPERFAMILY SSF51161 65 213 1.52E-37 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily DA442_23170 199f4d2a631ad01dc2c78640fc01623e 219 Gene3D G3DSA:2.160.10.10 1 218 1.9E-63 T 14-10-2018 DA442_23170 199f4d2a631ad01dc2c78640fc01623e 219 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 153 7.1E-10 T 14-10-2018 IPR001451 Hexapeptide repeat DA442_03485 acf94f9f0de1fc92b0b4b13e447c6ea2 374 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 61 99 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 DA442_03485 acf94f9f0de1fc92b0b4b13e447c6ea2 374 SUPERFAMILY SSF53927 14 156 2.17E-48 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 DA442_03485 acf94f9f0de1fc92b0b4b13e447c6ea2 374 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 157 368 4.9E-56 T 14-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 DA442_03485 acf94f9f0de1fc92b0b4b13e447c6ea2 374 PIRSF PIRSF006769 11 372 7.2E-119 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 DA442_03485 acf94f9f0de1fc92b0b4b13e447c6ea2 374 SUPERFAMILY SSF53597 155 366 4.06E-52 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 DA442_03485 acf94f9f0de1fc92b0b4b13e447c6ea2 374 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 18 365 5.6E-125 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 DA442_03485 acf94f9f0de1fc92b0b4b13e447c6ea2 374 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 15 110 2.8E-20 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain DA442_03485 acf94f9f0de1fc92b0b4b13e447c6ea2 374 Pfam PF01872 RibD C-terminal domain 158 361 3.4E-47 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 DA442_03485 acf94f9f0de1fc92b0b4b13e447c6ea2 374 Gene3D G3DSA:3.40.140.10 10 151 5.0E-47 T 14-10-2018 DA442_03485 acf94f9f0de1fc92b0b4b13e447c6ea2 374 Gene3D G3DSA:3.40.430.10 152 372 1.2E-64 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 DA442_23600 a39ccfe98d436967dd68eceb91bcf26e 207 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 14-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 DA442_23600 a39ccfe98d436967dd68eceb91bcf26e 207 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 6 204 2.0E-81 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 DA442_23600 a39ccfe98d436967dd68eceb91bcf26e 207 Pfam PF01081 KDPG and KHG aldolase 6 197 2.2E-70 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 DA442_23600 a39ccfe98d436967dd68eceb91bcf26e 207 SUPERFAMILY SSF51569 3 205 5.31E-65 T 14-10-2018 DA442_23600 a39ccfe98d436967dd68eceb91bcf26e 207 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 14-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 DA442_23600 a39ccfe98d436967dd68eceb91bcf26e 207 Gene3D G3DSA:3.20.20.70 1 207 5.8E-75 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_00875 8d4466814fd36a8d0cea405183398be0 866 Pfam PF00593 TonB dependent receptor 373 863 1.9E-46 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DA442_00875 8d4466814fd36a8d0cea405183398be0 866 SUPERFAMILY SSF56935 28 866 3.48E-89 T 14-10-2018 DA442_00875 8d4466814fd36a8d0cea405183398be0 866 Gene3D G3DSA:2.170.130.10 33 169 7.2E-34 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DA442_00875 8d4466814fd36a8d0cea405183398be0 866 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 165 1.1E-20 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain DA442_18770 6df8534e891f9b84a02dc3b1d1805baf 203 Gene3D G3DSA:3.40.50.300 27 197 6.1E-6 T 14-10-2018 DA442_18770 6df8534e891f9b84a02dc3b1d1805baf 203 SUPERFAMILY SSF52540 28 197 2.6E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_18770 6df8534e891f9b84a02dc3b1d1805baf 203 Pfam PF13521 AAA domain 30 193 1.2E-38 T 14-10-2018 IPR038727 NadR/Ttd14, AAA domain DA442_19560 d73724a5cd05035d814188fa9af42572 706 Pfam PF03477 ATP cone domain 4 89 3.1E-22 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 DA442_19560 d73724a5cd05035d814188fa9af42572 706 Gene3D G3DSA:3.20.70.20 121 687 7.4E-232 T 14-10-2018 DA442_19560 d73724a5cd05035d814188fa9af42572 706 SUPERFAMILY SSF51998 121 687 4.27E-193 T 14-10-2018 DA442_19560 d73724a5cd05035d814188fa9af42572 706 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 116 705 1.1E-180 T 14-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 DA442_19560 d73724a5cd05035d814188fa9af42572 706 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 115 705 5.2E-199 T 14-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 DA442_19560 d73724a5cd05035d814188fa9af42572 706 ProSitePatterns PS00850 Glycine radical domain signature. 676 684 - T 14-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site DA442_04400 27b51c9dd8af97ce3d8c3adc05762ebc 548 SUPERFAMILY SSF53738 27 235 2.05E-52 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DA442_04400 27b51c9dd8af97ce3d8c3adc05762ebc 548 Gene3D G3DSA:3.40.120.10 12 218 8.4E-76 T 14-10-2018 DA442_04400 27b51c9dd8af97ce3d8c3adc05762ebc 548 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 543 0.0 T 14-10-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-6981|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7900|MetaCyc: PWY-7902 DA442_04400 27b51c9dd8af97ce3d8c3adc05762ebc 548 SUPERFAMILY SSF53738 209 317 2.59E-8 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DA442_04400 27b51c9dd8af97ce3d8c3adc05762ebc 548 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DA442_04400 27b51c9dd8af97ce3d8c3adc05762ebc 548 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 438 2.4E-28 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DA442_04400 27b51c9dd8af97ce3d8c3adc05762ebc 548 Gene3D G3DSA:3.40.120.10 221 318 4.2E-45 T 14-10-2018 DA442_04400 27b51c9dd8af97ce3d8c3adc05762ebc 548 Gene3D G3DSA:3.40.120.10 319 442 6.5E-35 T 14-10-2018 DA442_04400 27b51c9dd8af97ce3d8c3adc05762ebc 548 SUPERFAMILY SSF53738 305 446 6.67E-31 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DA442_04400 27b51c9dd8af97ce3d8c3adc05762ebc 548 Gene3D G3DSA:3.30.310.50 443 546 1.5E-35 T 14-10-2018 DA442_04400 27b51c9dd8af97ce3d8c3adc05762ebc 548 SUPERFAMILY SSF55957 433 543 1.26E-20 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DA442_04400 27b51c9dd8af97ce3d8c3adc05762ebc 548 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 5.6E-18 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DA442_04400 27b51c9dd8af97ce3d8c3adc05762ebc 548 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 180 9.5E-41 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DA442_04400 27b51c9dd8af97ce3d8c3adc05762ebc 548 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 490 537 9.3E-9 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DA442_22080 dc1ea8f273135c1ccf9856208407094f 150 Gene3D G3DSA:3.30.530.20 1 150 6.4E-20 T 14-10-2018 IPR023393 START-like domain superfamily DA442_22080 dc1ea8f273135c1ccf9856208407094f 150 SUPERFAMILY SSF55961 2 146 2.75E-20 T 14-10-2018 DA442_22080 dc1ea8f273135c1ccf9856208407094f 150 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 12 85 1.7E-7 T 14-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like DA442_14270 b8df48dca97c125b41bcb2e154ea98b7 204 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 184 3.3E-67 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 DA442_14270 b8df48dca97c125b41bcb2e154ea98b7 204 SUPERFAMILY SSF52540 1 193 5.94E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_14270 b8df48dca97c125b41bcb2e154ea98b7 204 Gene3D G3DSA:3.40.50.300 1 204 6.1E-69 T 14-10-2018 DA442_14270 b8df48dca97c125b41bcb2e154ea98b7 204 Pfam PF01121 Dephospho-CoA kinase 3 179 1.6E-72 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 DA442_14270 b8df48dca97c125b41bcb2e154ea98b7 204 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 197 27.989 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 DA442_05735 e7fdc805488bf16e5cb15892b9c6e732 268 SUPERFAMILY SSF53335 20 207 8.82E-46 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_05735 e7fdc805488bf16e5cb15892b9c6e732 268 Pfam PF08241 Methyltransferase domain 58 148 4.0E-26 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 DA442_05735 e7fdc805488bf16e5cb15892b9c6e732 268 Gene3D G3DSA:3.40.50.150 4 264 2.7E-40 T 14-10-2018 DA442_05735 e7fdc805488bf16e5cb15892b9c6e732 268 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 22 266 3.6E-68 T 14-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 DA442_05735 e7fdc805488bf16e5cb15892b9c6e732 268 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 14 268 32.875 T 14-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 DA442_22005 b408a4af7fb1672fe985692194ee9864 468 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 269 288 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site DA442_22005 b408a4af7fb1672fe985692194ee9864 468 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 12 39 1.7E-4 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DA442_22005 b408a4af7fb1672fe985692194ee9864 468 Gene3D G3DSA:3.90.1150.10 72 457 3.0E-69 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DA442_22005 b408a4af7fb1672fe985692194ee9864 468 Gene3D G3DSA:3.40.640.10 85 355 3.0E-69 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_22005 b408a4af7fb1672fe985692194ee9864 468 Pfam PF00266 Aminotransferase class-V 123 407 2.3E-31 T 14-10-2018 IPR000192 Aminotransferase class V domain DA442_22005 b408a4af7fb1672fe985692194ee9864 468 SUPERFAMILY SSF53383 62 464 7.21E-65 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_10435 0dd8b0d69ca9bc2e750f0c924be24160 38 Pfam PF11665 Protein of unknown function (DUF3265) 11 38 4.7E-14 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_09575 0dd8b0d69ca9bc2e750f0c924be24160 38 Pfam PF11665 Protein of unknown function (DUF3265) 11 38 4.7E-14 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_22510 b07699f692a384d6ae18fc049deb0a17 726 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 127 717 2.1E-191 T 14-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 DA442_22510 b07699f692a384d6ae18fc049deb0a17 726 Pfam PF02446 4-alpha-glucanotransferase 177 699 1.3E-126 T 14-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 DA442_22510 b07699f692a384d6ae18fc049deb0a17 726 SUPERFAMILY SSF51445 163 717 1.03E-148 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DA442_22015 c507051893ae8938c2ed2c7eb2662686 457 Gene3D G3DSA:3.30.565.10 325 457 1.0E-12 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_22015 c507051893ae8938c2ed2c7eb2662686 457 SUPERFAMILY SSF55874 311 455 2.19E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_22015 c507051893ae8938c2ed2c7eb2662686 457 Gene3D G3DSA:1.10.287.130 194 316 7.8E-12 T 14-10-2018 DA442_22015 c507051893ae8938c2ed2c7eb2662686 457 SUPERFAMILY SSF47384 241 319 3.73E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DA442_22015 c507051893ae8938c2ed2c7eb2662686 457 Pfam PF00512 His Kinase A (phospho-acceptor) domain 261 319 1.9E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_22015 c507051893ae8938c2ed2c7eb2662686 457 SMART SM00388 257 320 3.5E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_02185 4e55eba1604f3cdef1e2dc4b0850db8b 476 Pfam PF01467 Cytidylyltransferase-like 345 468 1.1E-14 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DA442_02185 4e55eba1604f3cdef1e2dc4b0850db8b 476 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 472 3.1E-61 T 14-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 DA442_02185 4e55eba1604f3cdef1e2dc4b0850db8b 476 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 6.1E-18 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DA442_02185 4e55eba1604f3cdef1e2dc4b0850db8b 476 Pfam PF00294 pfkB family carbohydrate kinase 13 303 3.1E-47 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB DA442_02185 4e55eba1604f3cdef1e2dc4b0850db8b 476 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 7 312 5.2E-127 T 14-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 DA442_02185 4e55eba1604f3cdef1e2dc4b0850db8b 476 Gene3D G3DSA:3.40.50.620 321 474 4.9E-37 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DA442_02185 4e55eba1604f3cdef1e2dc4b0850db8b 476 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 42.991 T 14-10-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 DA442_02185 4e55eba1604f3cdef1e2dc4b0850db8b 476 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DA442_02185 4e55eba1604f3cdef1e2dc4b0850db8b 476 SUPERFAMILY SSF53613 12 302 2.65E-60 T 14-10-2018 IPR029056 Ribokinase-like DA442_02185 4e55eba1604f3cdef1e2dc4b0850db8b 476 SUPERFAMILY SSF52374 340 471 3.66E-23 T 14-10-2018 DA442_02185 4e55eba1604f3cdef1e2dc4b0850db8b 476 Gene3D G3DSA:3.40.1190.20 6 310 5.5E-113 T 14-10-2018 IPR029056 Ribokinase-like DA442_18780 6ce181032c5fe893998a22964bceefdb 83 Pfam PF11212 Protein of unknown function (DUF2999) 1 82 6.0E-44 T 14-10-2018 IPR021376 Protein of unknown function DUF2999 DA442_11955 0069fe2006549ef00f02e9c1db61053e 337 PIRSF PIRSF500176 2 333 3.4E-108 T 14-10-2018 DA442_11955 0069fe2006549ef00f02e9c1db61053e 337 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 14-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 DA442_11955 0069fe2006549ef00f02e9c1db61053e 337 PRINTS PR00139 Asparaginase/glutaminase family signature 261 279 8.4E-17 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DA442_11955 0069fe2006549ef00f02e9c1db61053e 337 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 8.4E-17 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DA442_11955 0069fe2006549ef00f02e9c1db61053e 337 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 8.4E-17 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DA442_11955 0069fe2006549ef00f02e9c1db61053e 337 SUPERFAMILY SSF53774 3 336 2.49E-114 T 14-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 DA442_11955 0069fe2006549ef00f02e9c1db61053e 337 PIRSF PIRSF001220 1 335 2.6E-94 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DA442_11955 0069fe2006549ef00f02e9c1db61053e 337 Gene3D G3DSA:3.40.50.1170 1 209 3.7E-93 T 14-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 DA442_11955 0069fe2006549ef00f02e9c1db61053e 337 SMART SM00870 5 324 1.9E-139 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DA442_11955 0069fe2006549ef00f02e9c1db61053e 337 Gene3D G3DSA:3.40.50.40 210 337 3.0E-45 T 14-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 DA442_11955 0069fe2006549ef00f02e9c1db61053e 337 Pfam PF00710 Asparaginase, N-terminal 5 191 7.7E-67 T 14-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 DA442_11955 0069fe2006549ef00f02e9c1db61053e 337 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 14-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 DA442_11955 0069fe2006549ef00f02e9c1db61053e 337 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 4 336 3.9E-116 T 14-10-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 DA442_11040 bf9dcbfbc7ee2470f0dfaf1a767f4386 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 1.2E-102 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DA442_11040 bf9dcbfbc7ee2470f0dfaf1a767f4386 268 SUPERFAMILY SSF51366 1 266 5.56E-92 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DA442_11040 bf9dcbfbc7ee2470f0dfaf1a767f4386 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 1.6E-101 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DA442_11040 bf9dcbfbc7ee2470f0dfaf1a767f4386 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 14-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DA442_11040 bf9dcbfbc7ee2470f0dfaf1a767f4386 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 38.262 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DA442_11040 bf9dcbfbc7ee2470f0dfaf1a767f4386 268 Gene3D G3DSA:3.20.20.70 1 268 3.0E-95 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_01725 66987c9322570673755b5c6cb8eab8ad 234 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 212 1.2E-101 T 14-10-2018 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0016021|GO:0042626|GO:0071934 DA442_01725 66987c9322570673755b5c6cb8eab8ad 234 SUPERFAMILY SSF52540 1 230 1.94E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_01725 66987c9322570673755b5c6cb8eab8ad 234 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_01725 66987c9322570673755b5c6cb8eab8ad 234 Gene3D G3DSA:3.40.50.300 1 233 1.2E-61 T 14-10-2018 DA442_01725 66987c9322570673755b5c6cb8eab8ad 234 SMART SM00382 24 207 1.3E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_01725 66987c9322570673755b5c6cb8eab8ad 234 Pfam PF00005 ABC transporter 18 157 1.6E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_24640 88f9bc5ee51dda7f198d74e497b9f836 532 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 522 1.2E-99 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 DA442_24640 88f9bc5ee51dda7f198d74e497b9f836 532 PRINTS PR00298 60kDa chaperonin signature 27 53 7.7E-71 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DA442_24640 88f9bc5ee51dda7f198d74e497b9f836 532 PRINTS PR00298 60kDa chaperonin signature 83 110 7.7E-71 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DA442_24640 88f9bc5ee51dda7f198d74e497b9f836 532 PRINTS PR00298 60kDa chaperonin signature 350 375 7.7E-71 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DA442_24640 88f9bc5ee51dda7f198d74e497b9f836 532 PRINTS PR00298 60kDa chaperonin signature 398 419 7.7E-71 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DA442_24640 88f9bc5ee51dda7f198d74e497b9f836 532 PRINTS PR00298 60kDa chaperonin signature 268 291 7.7E-71 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DA442_24640 88f9bc5ee51dda7f198d74e497b9f836 532 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DA442_24640 88f9bc5ee51dda7f198d74e497b9f836 532 Gene3D G3DSA:1.10.560.10 8 521 5.7E-237 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily DA442_24640 88f9bc5ee51dda7f198d74e497b9f836 532 Gene3D G3DSA:3.50.7.10 192 372 5.7E-237 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily DA442_24640 88f9bc5ee51dda7f198d74e497b9f836 532 SUPERFAMILY SSF54849 137 203 1.01E-24 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily DA442_24640 88f9bc5ee51dda7f198d74e497b9f836 532 SUPERFAMILY SSF52029 184 376 3.14E-79 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily DA442_24640 88f9bc5ee51dda7f198d74e497b9f836 532 Hamap MF_00600 60 kDa chaperonin [groL]. 2 530 39.838 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DA442_24640 88f9bc5ee51dda7f198d74e497b9f836 532 Gene3D G3DSA:3.30.260.10 136 410 5.7E-237 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily DA442_24640 88f9bc5ee51dda7f198d74e497b9f836 532 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 3.8E-250 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DA442_24640 88f9bc5ee51dda7f198d74e497b9f836 532 SUPERFAMILY SSF48592 7 521 2.29E-77 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily DA442_08510 7b7182f4f0b897e30d1842b3121b9c2a 467 Gene3D G3DSA:1.10.287.950 139 466 6.0E-64 T 14-10-2018 DA442_08510 7b7182f4f0b897e30d1842b3121b9c2a 467 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 252 431 6.0E-38 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_08510 7b7182f4f0b897e30d1842b3121b9c2a 467 SUPERFAMILY SSF58104 157 466 2.35E-66 T 14-10-2018 DA442_08510 7b7182f4f0b897e30d1842b3121b9c2a 467 SMART SM00283 205 466 5.9E-59 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_19575 0c2a764e47fa71c39940f759dc49372d 1102 SUPERFAMILY SSF82866 841 1088 2.22E-34 T 14-10-2018 DA442_19575 0c2a764e47fa71c39940f759dc49372d 1102 SUPERFAMILY SSF82693 45 139 1.08E-20 T 14-10-2018 DA442_19575 0c2a764e47fa71c39940f759dc49372d 1102 SUPERFAMILY SSF82866 302 502 5.75E-39 T 14-10-2018 DA442_19575 0c2a764e47fa71c39940f759dc49372d 1102 Gene3D G3DSA:3.30.70.1430 45 845 7.7E-221 T 14-10-2018 DA442_19575 0c2a764e47fa71c39940f759dc49372d 1102 SUPERFAMILY SSF82693 148 335 2.2E-8 T 14-10-2018 DA442_19575 0c2a764e47fa71c39940f759dc49372d 1102 SUPERFAMILY SSF82714 735 806 8.37E-7 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DA442_19575 0c2a764e47fa71c39940f759dc49372d 1102 Gene3D G3DSA:1.20.1640.10 518 1083 7.7E-221 T 14-10-2018 DA442_19575 0c2a764e47fa71c39940f759dc49372d 1102 Gene3D G3DSA:3.30.2090.10 185 275 7.7E-221 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DA442_19575 0c2a764e47fa71c39940f759dc49372d 1102 Gene3D G3DSA:3.30.70.1440 679 919 7.7E-221 T 14-10-2018 DA442_19575 0c2a764e47fa71c39940f759dc49372d 1102 Pfam PF00873 AcrB/AcrD/AcrF family 20 1085 3.7E-149 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_19575 0c2a764e47fa71c39940f759dc49372d 1102 PRINTS PR00702 Acriflavin resistance protein family signature 397 421 8.9E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_19575 0c2a764e47fa71c39940f759dc49372d 1102 PRINTS PR00702 Acriflavin resistance protein family signature 476 499 8.9E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_19575 0c2a764e47fa71c39940f759dc49372d 1102 PRINTS PR00702 Acriflavin resistance protein family signature 43 61 8.9E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_19575 0c2a764e47fa71c39940f759dc49372d 1102 PRINTS PR00702 Acriflavin resistance protein family signature 451 474 8.9E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_19575 0c2a764e47fa71c39940f759dc49372d 1102 PRINTS PR00702 Acriflavin resistance protein family signature 15 39 8.9E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_19575 0c2a764e47fa71c39940f759dc49372d 1102 PRINTS PR00702 Acriflavin resistance protein family signature 343 366 8.9E-27 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_19575 0c2a764e47fa71c39940f759dc49372d 1102 Gene3D G3DSA:3.30.70.1320 139 339 7.7E-221 T 14-10-2018 DA442_19575 0c2a764e47fa71c39940f759dc49372d 1102 Gene3D G3DSA:1.20.1640.10 21 517 7.7E-221 T 14-10-2018 DA442_19575 0c2a764e47fa71c39940f759dc49372d 1102 Gene3D G3DSA:3.30.2090.10 732 837 7.7E-221 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DA442_19575 0c2a764e47fa71c39940f759dc49372d 1102 Gene3D G3DSA:3.30.70.1430 570 678 7.7E-221 T 14-10-2018 DA442_19575 0c2a764e47fa71c39940f759dc49372d 1102 SUPERFAMILY SSF82714 190 271 5.49E-13 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DA442_19575 0c2a764e47fa71c39940f759dc49372d 1102 SUPERFAMILY SSF82693 568 669 3.66E-8 T 14-10-2018 DA442_00845 50be4dae2509bc780abba7423dc0ba76 404 Gene3D G3DSA:1.25.40.10 105 249 7.3E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_00845 50be4dae2509bc780abba7423dc0ba76 404 SUPERFAMILY SSF48452 211 384 4.49E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_00845 50be4dae2509bc780abba7423dc0ba76 404 Pfam PF13181 Tetratricopeptide repeat 148 179 0.0029 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_00845 50be4dae2509bc780abba7423dc0ba76 404 SUPERFAMILY SSF48452 71 246 3.67E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_00845 50be4dae2509bc780abba7423dc0ba76 404 Gene3D G3DSA:1.25.40.10 31 102 3.9E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_00845 50be4dae2509bc780abba7423dc0ba76 404 SMART SM00028 71 104 1.2 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_00845 50be4dae2509bc780abba7423dc0ba76 404 SMART SM00028 288 321 41.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_00845 50be4dae2509bc780abba7423dc0ba76 404 SMART SM00028 148 181 1.7 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_00845 50be4dae2509bc780abba7423dc0ba76 404 Gene3D G3DSA:1.25.40.10 255 396 3.2E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_25485 502e259080d5a3617deabf634cb93ce0 449 SUPERFAMILY SSF51011 397 446 2.66E-5 T 14-10-2018 DA442_25485 502e259080d5a3617deabf634cb93ce0 449 SMART SM00642 13 374 2.1E-21 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DA442_25485 502e259080d5a3617deabf634cb93ce0 449 Pfam PF00128 Alpha amylase, catalytic domain 26 239 4.6E-16 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DA442_25485 502e259080d5a3617deabf634cb93ce0 449 Gene3D G3DSA:3.20.20.80 9 379 2.8E-78 T 14-10-2018 DA442_25485 502e259080d5a3617deabf634cb93ce0 449 PRINTS PR00110 Alpha-amylase signature 230 248 3.7E-16 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 DA442_25485 502e259080d5a3617deabf634cb93ce0 449 PRINTS PR00110 Alpha-amylase signature 55 72 3.7E-16 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 DA442_25485 502e259080d5a3617deabf634cb93ce0 449 PRINTS PR00110 Alpha-amylase signature 201 212 3.7E-16 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 DA442_25485 502e259080d5a3617deabf634cb93ce0 449 PRINTS PR00110 Alpha-amylase signature 296 308 3.7E-16 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 DA442_25485 502e259080d5a3617deabf634cb93ce0 449 PRINTS PR00110 Alpha-amylase signature 88 99 3.7E-16 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 DA442_25485 502e259080d5a3617deabf634cb93ce0 449 SUPERFAMILY SSF51445 12 356 1.3E-61 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DA442_01110 ab4aa982bc92b78d84db02ab6280f5cb 351 Gene3D G3DSA:3.90.550.10 121 348 1.9E-61 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DA442_01110 ab4aa982bc92b78d84db02ab6280f5cb 351 SUPERFAMILY SSF54631 7 57 8.83E-8 T 14-10-2018 DA442_01110 ab4aa982bc92b78d84db02ab6280f5cb 351 SMART SM00116 70 117 3.6 T 14-10-2018 IPR000644 CBS domain DA442_01110 ab4aa982bc92b78d84db02ab6280f5cb 351 SMART SM00116 6 54 2.1 T 14-10-2018 IPR000644 CBS domain DA442_01110 ab4aa982bc92b78d84db02ab6280f5cb 351 SUPERFAMILY SSF53448 48 346 4.46E-70 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DA442_01110 ab4aa982bc92b78d84db02ab6280f5cb 351 Pfam PF00571 CBS domain 64 109 9.4E-4 T 14-10-2018 IPR000644 CBS domain DA442_01110 ab4aa982bc92b78d84db02ab6280f5cb 351 Pfam PF00571 CBS domain 9 53 9.6E-8 T 14-10-2018 IPR000644 CBS domain DA442_01110 ab4aa982bc92b78d84db02ab6280f5cb 351 Gene3D G3DSA:3.10.580.10 1 114 1.0E-21 T 14-10-2018 DA442_01110 ab4aa982bc92b78d84db02ab6280f5cb 351 Pfam PF00483 Nucleotidyl transferase 124 345 7.5E-39 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 DA442_20390 a5765c5c93302e8b24a0e62ab82e1046 261 SMART SM00244 19 176 1.8E-64 T 14-10-2018 IPR001107 Band 7 domain DA442_20390 a5765c5c93302e8b24a0e62ab82e1046 261 Gene3D G3DSA:3.30.479.30 47 178 3.4E-49 T 14-10-2018 DA442_20390 a5765c5c93302e8b24a0e62ab82e1046 261 SUPERFAMILY SSF117892 50 183 2.22E-43 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily DA442_20390 a5765c5c93302e8b24a0e62ab82e1046 261 Pfam PF01145 SPFH domain / Band 7 family 24 192 6.6E-36 T 14-10-2018 IPR001107 Band 7 domain DA442_20390 a5765c5c93302e8b24a0e62ab82e1046 261 PRINTS PR00721 Stomatin signature 108 125 9.4E-64 T 14-10-2018 IPR001972 Stomatin family GO:0016020 DA442_20390 a5765c5c93302e8b24a0e62ab82e1046 261 PRINTS PR00721 Stomatin signature 152 170 9.4E-64 T 14-10-2018 IPR001972 Stomatin family GO:0016020 DA442_20390 a5765c5c93302e8b24a0e62ab82e1046 261 PRINTS PR00721 Stomatin signature 171 192 9.4E-64 T 14-10-2018 IPR001972 Stomatin family GO:0016020 DA442_20390 a5765c5c93302e8b24a0e62ab82e1046 261 PRINTS PR00721 Stomatin signature 73 94 9.4E-64 T 14-10-2018 IPR001972 Stomatin family GO:0016020 DA442_20390 a5765c5c93302e8b24a0e62ab82e1046 261 PRINTS PR00721 Stomatin signature 196 219 9.4E-64 T 14-10-2018 IPR001972 Stomatin family GO:0016020 DA442_20390 a5765c5c93302e8b24a0e62ab82e1046 261 PRINTS PR00721 Stomatin signature 26 48 9.4E-64 T 14-10-2018 IPR001972 Stomatin family GO:0016020 DA442_20390 a5765c5c93302e8b24a0e62ab82e1046 261 PRINTS PR00721 Stomatin signature 128 151 9.4E-64 T 14-10-2018 IPR001972 Stomatin family GO:0016020 DA442_07585 ee2d4d8457568d7bdb098fb432927621 582 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 4 582 3.4E-202 T 14-10-2018 IPR010272 Type VI secretion system, TssF-like DA442_07585 ee2d4d8457568d7bdb098fb432927621 582 PIRSF PIRSF028304 2 582 1.5E-208 T 14-10-2018 IPR010272 Type VI secretion system, TssF-like DA442_07585 ee2d4d8457568d7bdb098fb432927621 582 Pfam PF05947 Type VI secretion system, TssF 5 580 1.8E-187 T 14-10-2018 IPR010272 Type VI secretion system, TssF-like DA442_04450 c83b318316a807d22c13a5d87739508c 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.209 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DA442_04450 c83b318316a807d22c13a5d87739508c 388 Gene3D G3DSA:3.30.470.20 1 234 5.2E-92 T 14-10-2018 DA442_04450 c83b318316a807d22c13a5d87739508c 388 Pfam PF08442 ATP-grasp domain 2 203 3.7E-79 T 14-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DA442_04450 c83b318316a807d22c13a5d87739508c 388 Gene3D G3DSA:3.40.50.261 240 388 1.1E-56 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DA442_04450 c83b318316a807d22c13a5d87739508c 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 4.0E-174 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DA442_04450 c83b318316a807d22c13a5d87739508c 388 SUPERFAMILY SSF56059 1 238 7.81E-79 T 14-10-2018 DA442_04450 c83b318316a807d22c13a5d87739508c 388 Pfam PF00549 CoA-ligase 262 382 5.5E-25 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DA442_04450 c83b318316a807d22c13a5d87739508c 388 SUPERFAMILY SSF52210 239 385 2.35E-54 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DA442_04450 c83b318316a807d22c13a5d87739508c 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 14-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DA442_04450 c83b318316a807d22c13a5d87739508c 388 Gene3D G3DSA:3.30.1490.20 21 104 5.2E-92 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DA442_04450 c83b318316a807d22c13a5d87739508c 388 PIRSF PIRSF001554 1 388 3.8E-154 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DA442_15040 472207b5ceb69318a610d3df012dd81e 952 SUPERFAMILY SSF46589 885 949 8.89E-18 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 DA442_15040 472207b5ceb69318a610d3df012dd81e 952 Gene3D G3DSA:3.40.50.620 325 555 3.3E-71 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DA442_15040 472207b5ceb69318a610d3df012dd81e 952 Gene3D G3DSA:3.90.740.10 242 312 3.3E-9 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DA442_15040 472207b5ceb69318a610d3df012dd81e 952 Pfam PF08264 Anticodon-binding domain of tRNA 674 826 5.1E-39 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 DA442_15040 472207b5ceb69318a610d3df012dd81e 952 Gene3D G3DSA:1.10.730.10 576 818 3.2E-70 T 14-10-2018 DA442_15040 472207b5ceb69318a610d3df012dd81e 952 Gene3D G3DSA:3.40.50.620 2 203 1.6E-63 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DA442_15040 472207b5ceb69318a610d3df012dd81e 952 Gene3D G3DSA:1.10.287.380 878 950 6.7E-19 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 DA442_15040 472207b5ceb69318a610d3df012dd81e 952 SUPERFAMILY SSF50677 191 365 4.84E-59 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DA442_15040 472207b5ceb69318a610d3df012dd81e 952 SUPERFAMILY SSF52374 1 641 2.38E-135 T 14-10-2018 DA442_15040 472207b5ceb69318a610d3df012dd81e 952 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 885 945 6.9E-18 T 14-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 DA442_15040 472207b5ceb69318a610d3df012dd81e 952 SUPERFAMILY SSF47323 642 899 5.98E-66 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DA442_15040 472207b5ceb69318a610d3df012dd81e 952 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DA442_15040 472207b5ceb69318a610d3df012dd81e 952 Gene3D G3DSA:3.90.740.10 204 241 6.1E-6 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DA442_15040 472207b5ceb69318a610d3df012dd81e 952 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 631 3.4E-226 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 DA442_15040 472207b5ceb69318a610d3df012dd81e 952 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 1.4E-34 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DA442_15040 472207b5ceb69318a610d3df012dd81e 952 PRINTS PR00986 Valyl-tRNA synthetase signature 469 490 1.4E-34 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DA442_15040 472207b5ceb69318a610d3df012dd81e 952 PRINTS PR00986 Valyl-tRNA synthetase signature 500 518 1.4E-34 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DA442_15040 472207b5ceb69318a610d3df012dd81e 952 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 1.4E-34 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DA442_15040 472207b5ceb69318a610d3df012dd81e 952 PRINTS PR00986 Valyl-tRNA synthetase signature 369 382 1.4E-34 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DA442_15040 472207b5ceb69318a610d3df012dd81e 952 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 950 16.042 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DA442_15040 472207b5ceb69318a610d3df012dd81e 952 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 933 0.0 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DA442_16285 9db8def5a3a2c11c218cf40ade99f173 581 Pfam PF03471 Transporter associated domain 497 570 1.7E-7 T 14-10-2018 IPR005170 Transporter-associated domain DA442_16285 9db8def5a3a2c11c218cf40ade99f173 581 Pfam PF00999 Sodium/hydrogen exchanger family 15 385 2.0E-57 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 DA442_16285 9db8def5a3a2c11c218cf40ade99f173 581 Gene3D G3DSA:3.30.465.10 497 581 4.4E-6 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DA442_16285 9db8def5a3a2c11c218cf40ade99f173 581 SUPERFAMILY SSF116726 413 481 6.54E-10 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DA442_16285 9db8def5a3a2c11c218cf40ade99f173 581 Hamap MF_01075 K(+)/H(+) antiporter NhaP2 [nhaP2]. 1 575 51.288 T 14-10-2018 IPR023729 K(+)/H(+) antiporter NhaP2 GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0016021 DA442_16285 9db8def5a3a2c11c218cf40ade99f173 581 Gene3D G3DSA:1.20.1530.20 7 392 2.8E-22 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily DA442_16285 9db8def5a3a2c11c218cf40ade99f173 581 SUPERFAMILY SSF56176 499 570 6.27E-8 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DA442_16285 9db8def5a3a2c11c218cf40ade99f173 581 Pfam PF02080 TrkA-C domain 417 484 4.2E-13 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DA442_16285 9db8def5a3a2c11c218cf40ade99f173 581 SMART SM01091 493 572 1.1E-9 T 14-10-2018 IPR005170 Transporter-associated domain DA442_16285 9db8def5a3a2c11c218cf40ade99f173 581 Gene3D G3DSA:3.30.70.1450 407 483 9.4E-12 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DA442_15525 a62113938c9df315730818a1c9f30bd3 154 Gene3D G3DSA:1.10.10.10 3 89 3.4E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_15525 a62113938c9df315730818a1c9f30bd3 154 SUPERFAMILY SSF46785 11 144 2.2E-35 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_15525 a62113938c9df315730818a1c9f30bd3 154 Gene3D G3DSA:3.30.1490.190 90 150 2.4E-16 T 14-10-2018 DA442_15525 a62113938c9df315730818a1c9f30bd3 154 Pfam PF01475 Ferric uptake regulator family 19 138 1.4E-19 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 DA442_02605 ea9103e2d06757700e35fdeb7b224170 172 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 DA442_02605 ea9103e2d06757700e35fdeb7b224170 172 Pfam PF00258 Flavodoxin 5 160 6.0E-28 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 DA442_02605 ea9103e2d06757700e35fdeb7b224170 172 SUPERFAMILY SSF52218 1 167 2.51E-48 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DA442_02605 ea9103e2d06757700e35fdeb7b224170 172 Gene3D G3DSA:3.40.50.360 1 172 4.6E-50 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DA442_02605 ea9103e2d06757700e35fdeb7b224170 172 PIRSF PIRSF038996 1 171 9.3E-59 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 DA442_02605 ea9103e2d06757700e35fdeb7b224170 172 TIGRFAM TIGR01752 flav_long: flavodoxin 2 168 2.3E-68 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 DA442_19555 8aa5ae14cf49fb7d29bd89cff1c64d57 156 PIRSF PIRSF000368 1 156 1.8E-60 T 14-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 DA442_19555 8aa5ae14cf49fb7d29bd89cff1c64d57 156 Pfam PF13353 4Fe-4S single cluster domain 12 151 1.3E-52 T 14-10-2018 DA442_19555 8aa5ae14cf49fb7d29bd89cff1c64d57 156 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 2 152 2.7E-62 T 14-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 DA442_19555 8aa5ae14cf49fb7d29bd89cff1c64d57 156 SUPERFAMILY SSF102114 23 117 3.79E-8 T 14-10-2018 DA442_19555 8aa5ae14cf49fb7d29bd89cff1c64d57 156 Gene3D G3DSA:3.20.20.70 2 156 4.1E-23 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_19555 8aa5ae14cf49fb7d29bd89cff1c64d57 156 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 14-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 DA442_17345 95f947c1cc032d553bb1d0878d8d71a4 481 Pfam PF02386 Cation transport protein 51 475 2.6E-49 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 DA442_17345 95f947c1cc032d553bb1d0878d8d71a4 481 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 464 1.0E-114 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 DA442_17345 95f947c1cc032d553bb1d0878d8d71a4 481 PIRSF PIRSF006247 1 481 6.5E-166 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 DA442_16805 3e7c68a8025c262dbcca6ae2a190895f 286 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 15 283 8.0E-126 T 14-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 DA442_16805 3e7c68a8025c262dbcca6ae2a190895f 286 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DA442_16805 3e7c68a8025c262dbcca6ae2a190895f 286 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 253 279 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DA442_16805 3e7c68a8025c262dbcca6ae2a190895f 286 SUPERFAMILY SSF88659 199 282 1.57E-18 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DA442_16805 3e7c68a8025c262dbcca6ae2a190895f 286 Gene3D G3DSA:1.20.140.160 131 284 1.2E-14 T 14-10-2018 DA442_16805 3e7c68a8025c262dbcca6ae2a190895f 286 PRINTS PR00046 Major sigma-70 factor signature 234 246 1.1E-18 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DA442_16805 3e7c68a8025c262dbcca6ae2a190895f 286 PRINTS PR00046 Major sigma-70 factor signature 253 268 1.1E-18 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DA442_16805 3e7c68a8025c262dbcca6ae2a190895f 286 PRINTS PR00046 Major sigma-70 factor signature 77 90 1.1E-18 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DA442_16805 3e7c68a8025c262dbcca6ae2a190895f 286 PRINTS PR00046 Major sigma-70 factor signature 268 279 1.1E-18 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DA442_16805 3e7c68a8025c262dbcca6ae2a190895f 286 Pfam PF00140 Sigma-70 factor, region 1.2 14 40 8.0E-9 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DA442_16805 3e7c68a8025c262dbcca6ae2a190895f 286 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 281 3.4E-33 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DA442_16805 3e7c68a8025c262dbcca6ae2a190895f 286 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 285 53.192 T 14-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 DA442_16805 3e7c68a8025c262dbcca6ae2a190895f 286 Pfam PF04545 Sigma-70, region 4 230 280 7.7E-16 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 DA442_16805 3e7c68a8025c262dbcca6ae2a190895f 286 Pfam PF04542 Sigma-70 region 2 53 122 6.4E-17 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DA442_16805 3e7c68a8025c262dbcca6ae2a190895f 286 Gene3D G3DSA:1.20.120.1810 11 122 6.8E-27 T 14-10-2018 DA442_16805 3e7c68a8025c262dbcca6ae2a190895f 286 SUPERFAMILY SSF88946 11 122 5.97E-40 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DA442_11785 1deff4752727e713b6999b07d007ca4b 211 PIRSF PIRSF006091 1 205 3.2E-77 T 14-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 DA442_11785 1deff4752727e713b6999b07d007ca4b 211 SMART SM00900 100 192 1.6E-33 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 DA442_11785 1deff4752727e713b6999b07d007ca4b 211 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 2 194 26.688 T 14-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 DA442_11785 1deff4752727e713b6999b07d007ca4b 211 Pfam PF04205 FMN-binding domain 100 189 4.5E-20 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 DA442_11785 1deff4752727e713b6999b07d007ca4b 211 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 193 2.9E-64 T 14-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 DA442_03935 2d03c048c875220d2fb1b0549c69edfa 560 Gene3D G3DSA:3.60.21.10 30 365 4.8E-125 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like DA442_03935 2d03c048c875220d2fb1b0549c69edfa 560 Pfam PF00149 Calcineurin-like phosphoesterase 38 259 2.2E-23 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DA442_03935 2d03c048c875220d2fb1b0549c69edfa 560 ProSitePatterns PS00786 5'-nucleotidase signature 2. 113 124 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_03935 2d03c048c875220d2fb1b0549c69edfa 560 PRINTS PR01607 Apyrase family signature 287 307 6.5E-52 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_03935 2d03c048c875220d2fb1b0549c69edfa 560 PRINTS PR01607 Apyrase family signature 36 54 6.5E-52 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_03935 2d03c048c875220d2fb1b0549c69edfa 560 PRINTS PR01607 Apyrase family signature 420 443 6.5E-52 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_03935 2d03c048c875220d2fb1b0549c69edfa 560 PRINTS PR01607 Apyrase family signature 242 265 6.5E-52 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_03935 2d03c048c875220d2fb1b0549c69edfa 560 PRINTS PR01607 Apyrase family signature 211 228 6.5E-52 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_03935 2d03c048c875220d2fb1b0549c69edfa 560 PRINTS PR01607 Apyrase family signature 487 506 6.5E-52 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_03935 2d03c048c875220d2fb1b0549c69edfa 560 ProSitePatterns PS00785 5'-nucleotidase signature 1. 38 50 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_03935 2d03c048c875220d2fb1b0549c69edfa 560 Gene3D G3DSA:3.90.780.10 366 552 1.7E-58 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_03935 2d03c048c875220d2fb1b0549c69edfa 560 SUPERFAMILY SSF56300 32 364 2.8E-95 T 14-10-2018 DA442_03935 2d03c048c875220d2fb1b0549c69edfa 560 SUPERFAMILY SSF55816 366 542 1.96E-52 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_03935 2d03c048c875220d2fb1b0549c69edfa 560 Pfam PF02872 5'-nucleotidase, C-terminal domain 367 512 1.9E-34 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_10165 07a6a202893a412214c95c46d4340605 85 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 71 4.1E-15 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM DA442_10165 07a6a202893a412214c95c46d4340605 85 SUPERFAMILY SSF143120 1 75 6.1E-17 T 14-10-2018 IPR036165 YefM-like superfamily DA442_10165 07a6a202893a412214c95c46d4340605 85 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 5 56 4.5E-11 T 14-10-2018 DA442_10165 07a6a202893a412214c95c46d4340605 85 Gene3D G3DSA:3.40.1620.10 1 40 1.1E-5 T 14-10-2018 DA442_04700 371ed3e598e17bf4bc858fe7f2803bc0 361 SUPERFAMILY SSF53335 107 347 7.07E-35 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_04700 371ed3e598e17bf4bc858fe7f2803bc0 361 Pfam PF00891 O-methyltransferase 181 344 5.2E-12 T 14-10-2018 IPR001077 O-methyltransferase, family 2 GO:0008171 DA442_04700 371ed3e598e17bf4bc858fe7f2803bc0 361 PIRSF PIRSF005739 8 353 4.3E-6 T 14-10-2018 IPR016461 O-methyltransferase COMT-type GO:0008168 DA442_04700 371ed3e598e17bf4bc858fe7f2803bc0 361 Gene3D G3DSA:1.10.10.10 7 104 1.4E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_04700 371ed3e598e17bf4bc858fe7f2803bc0 361 SUPERFAMILY SSF46785 25 105 8.85E-8 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_04700 371ed3e598e17bf4bc858fe7f2803bc0 361 Gene3D G3DSA:3.40.50.150 172 356 7.9E-110 T 14-10-2018 DA442_04700 371ed3e598e17bf4bc858fe7f2803bc0 361 Gene3D G3DSA:1.20.58.1390 107 321 7.9E-110 T 14-10-2018 DA442_13930 764354c062300e314af53e4e2e5f6d54 446 SUPERFAMILY SSF53738 259 365 3.3E-28 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DA442_13930 764354c062300e314af53e4e2e5f6d54 446 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 8 443 2.8E-204 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DA442_13930 764354c062300e314af53e4e2e5f6d54 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 255 7.4E-19 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DA442_13930 764354c062300e314af53e4e2e5f6d54 446 SUPERFAMILY SSF53738 157 257 3.57E-29 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DA442_13930 764354c062300e314af53e4e2e5f6d54 446 Gene3D G3DSA:3.40.120.10 258 340 6.9E-60 T 14-10-2018 DA442_13930 764354c062300e314af53e4e2e5f6d54 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 442 6.8E-13 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DA442_13930 764354c062300e314af53e4e2e5f6d54 446 Gene3D G3DSA:3.40.120.10 4 155 4.7E-49 T 14-10-2018 DA442_13930 764354c062300e314af53e4e2e5f6d54 446 SUPERFAMILY SSF55957 358 444 2.88E-22 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DA442_13930 764354c062300e314af53e4e2e5f6d54 446 Gene3D G3DSA:3.40.120.10 176 363 6.9E-60 T 14-10-2018 DA442_13930 764354c062300e314af53e4e2e5f6d54 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 259 368 1.8E-30 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DA442_13930 764354c062300e314af53e4e2e5f6d54 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 136 1.4E-45 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DA442_13930 764354c062300e314af53e4e2e5f6d54 446 Gene3D G3DSA:3.30.310.50 371 446 2.5E-25 T 14-10-2018 DA442_13930 764354c062300e314af53e4e2e5f6d54 446 SUPERFAMILY SSF53738 4 182 7.46E-49 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DA442_13930 764354c062300e314af53e4e2e5f6d54 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 175 194 2.9E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DA442_13930 764354c062300e314af53e4e2e5f6d54 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 2.9E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DA442_13930 764354c062300e314af53e4e2e5f6d54 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 96 110 2.9E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DA442_13930 764354c062300e314af53e4e2e5f6d54 446 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 97 106 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DA442_13930 764354c062300e314af53e4e2e5f6d54 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 4 445 47.001 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DA442_12915 175de0cabccac71e3ab50d10dd7f9c23 654 Gene3D G3DSA:3.40.50.300 11 214 1.5E-68 T 14-10-2018 DA442_12915 175de0cabccac71e3ab50d10dd7f9c23 654 SMART SM00490 258 339 4.7E-28 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_12915 175de0cabccac71e3ab50d10dd7f9c23 654 SMART SM00487 28 224 2.1E-21 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DA442_12915 175de0cabccac71e3ab50d10dd7f9c23 654 SUPERFAMILY SSF52540 73 351 3.58E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_12915 175de0cabccac71e3ab50d10dd7f9c23 654 Gene3D G3DSA:3.40.50.300 215 461 8.6E-45 T 14-10-2018 DA442_12915 175de0cabccac71e3ab50d10dd7f9c23 654 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 147 156 - T 14-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site DA442_12915 175de0cabccac71e3ab50d10dd7f9c23 654 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 22 362 3.3E-112 T 14-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 DA442_12915 175de0cabccac71e3ab50d10dd7f9c23 654 Gene3D G3DSA:1.10.10.10 509 654 7.9E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_12915 175de0cabccac71e3ab50d10dd7f9c23 654 Pfam PF00271 Helicase conserved C-terminal domain 245 338 2.7E-18 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_12915 175de0cabccac71e3ab50d10dd7f9c23 654 Pfam PF00270 DEAD/DEAH box helicase 35 194 1.0E-14 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DA442_12915 175de0cabccac71e3ab50d10dd7f9c23 654 Pfam PF16124 RecQ zinc-binding 525 572 8.1E-9 T 14-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain DA442_02090 def3f60174283fc62d82c83d057671d7 586 PIRSF PIRSF002811 2 585 3.9E-143 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 DA442_02090 def3f60174283fc62d82c83d057671d7 586 SMART SM00766 456 581 2.8E-58 T 14-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 DA442_02090 def3f60174283fc62d82c83d057671d7 586 SUPERFAMILY SSF117023 453 584 6.41E-45 T 14-10-2018 DA442_02090 def3f60174283fc62d82c83d057671d7 586 Gene3D G3DSA:1.10.860.10 444 586 7.5E-59 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal DA442_02090 def3f60174283fc62d82c83d057671d7 586 Gene3D G3DSA:3.90.980.10 122 247 9.7E-46 T 14-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily DA442_02090 def3f60174283fc62d82c83d057671d7 586 TIGRFAM TIGR01391 dnaG: DNA primase 5 425 7.9E-147 T 14-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 DA442_02090 def3f60174283fc62d82c83d057671d7 586 Pfam PF01807 CHC2 zinc finger 6 101 2.5E-41 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 DA442_02090 def3f60174283fc62d82c83d057671d7 586 Pfam PF08278 DNA primase DnaG DnaB-binding 457 580 6.4E-37 T 14-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 DA442_02090 def3f60174283fc62d82c83d057671d7 586 SUPERFAMILY SSF57783 4 101 4.76E-38 T 14-10-2018 DA442_02090 def3f60174283fc62d82c83d057671d7 586 Pfam PF13155 Toprim-like 270 356 3.0E-13 T 14-10-2018 DA442_02090 def3f60174283fc62d82c83d057671d7 586 Pfam PF10410 DnaB-helicase binding domain of primase 377 431 8.2E-8 T 14-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 DA442_02090 def3f60174283fc62d82c83d057671d7 586 SUPERFAMILY SSF56731 122 431 5.1E-110 T 14-10-2018 DA442_02090 def3f60174283fc62d82c83d057671d7 586 Hamap MF_00974 DNA primase [dnaG]. 4 582 29.128 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 DA442_02090 def3f60174283fc62d82c83d057671d7 586 Gene3D G3DSA:3.40.1360.10 248 374 2.1E-42 T 14-10-2018 DA442_02090 def3f60174283fc62d82c83d057671d7 586 SMART SM00493 266 337 1.4E-17 T 14-10-2018 IPR006171 TOPRIM domain DA442_02090 def3f60174283fc62d82c83d057671d7 586 SMART SM00400 36 90 2.1E-36 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 DA442_02090 def3f60174283fc62d82c83d057671d7 586 Gene3D G3DSA:3.90.580.10 1 102 1.0E-39 T 14-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 DA442_02090 def3f60174283fc62d82c83d057671d7 586 Gene3D G3DSA:1.20.50.20 375 433 3.1E-8 T 14-10-2018 DA442_02090 def3f60174283fc62d82c83d057671d7 586 Pfam PF08275 DNA primase catalytic core, N-terminal domain 133 257 8.9E-42 T 14-10-2018 IPR013264 DNA primase, catalytic core, N-terminal DA442_13695 2440cb65713062a289c694166b9c06f7 606 SUPERFAMILY SSF52540 129 593 1.68E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_13695 2440cb65713062a289c694166b9c06f7 606 Gene3D G3DSA:3.40.50.300 385 604 2.6E-27 T 14-10-2018 DA442_13695 2440cb65713062a289c694166b9c06f7 606 Gene3D G3DSA:3.40.50.300 104 287 1.8E-13 T 14-10-2018 DA442_13695 2440cb65713062a289c694166b9c06f7 606 Pfam PF12696 TraM recognition site of TraD and TraG 451 577 2.6E-12 T 14-10-2018 IPR032689 TraD/TraG, TraM recognition site DA442_13695 2440cb65713062a289c694166b9c06f7 606 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 6 599 2.4E-226 T 14-10-2018 IPR022458 Conjugative coupling factor TraG/TraD DA442_13695 2440cb65713062a289c694166b9c06f7 606 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 153 287 6.5E-10 T 14-10-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain DA442_11870 f019e63641f18cc8d7a6908155b92716 285 PRINTS PR00169 Potassium channel signature 212 238 1.3E-35 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 DA442_11870 f019e63641f18cc8d7a6908155b92716 285 PRINTS PR00169 Potassium channel signature 63 86 1.3E-35 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 DA442_11870 f019e63641f18cc8d7a6908155b92716 285 PRINTS PR00169 Potassium channel signature 154 177 1.3E-35 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 DA442_11870 f019e63641f18cc8d7a6908155b92716 285 PRINTS PR00169 Potassium channel signature 89 109 1.3E-35 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 DA442_11870 f019e63641f18cc8d7a6908155b92716 285 PRINTS PR00169 Potassium channel signature 183 205 1.3E-35 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 DA442_11870 f019e63641f18cc8d7a6908155b92716 285 PRINTS PR00169 Potassium channel signature 21 49 1.3E-35 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 DA442_11870 f019e63641f18cc8d7a6908155b92716 285 PRINTS PR00169 Potassium channel signature 125 151 1.3E-35 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 DA442_11870 f019e63641f18cc8d7a6908155b92716 285 SUPERFAMILY SSF81324 28 239 3.06E-51 T 14-10-2018 DA442_11870 f019e63641f18cc8d7a6908155b92716 285 Pfam PF00520 Ion transport protein 29 239 8.9E-31 T 14-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 DA442_11870 f019e63641f18cc8d7a6908155b92716 285 Gene3D G3DSA:1.10.287.70 28 241 3.1E-57 T 14-10-2018 DA442_14615 3b8ac1e2f2e6db60eb6026a3926eecb9 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 63 1.0E-30 T 14-10-2018 IPR009491 Protein of unknown function DUF1107 DA442_14615 3b8ac1e2f2e6db60eb6026a3926eecb9 68 Gene3D G3DSA:3.30.1910.10 1 63 1.6E-29 T 14-10-2018 DA442_14615 3b8ac1e2f2e6db60eb6026a3926eecb9 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 4.9E-29 T 14-10-2018 IPR009491 Protein of unknown function DUF1107 DA442_18005 090f91f902f64860d8c955b3fedabea1 252 Gene3D G3DSA:3.40.50.720 1 252 4.0E-72 T 14-10-2018 DA442_18005 090f91f902f64860d8c955b3fedabea1 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 250 1.1E-54 T 14-10-2018 DA442_18005 090f91f902f64860d8c955b3fedabea1 252 SUPERFAMILY SSF51735 4 250 1.7E-68 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_18005 090f91f902f64860d8c955b3fedabea1 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 1.2E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_18005 090f91f902f64860d8c955b3fedabea1 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 1.2E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_18005 090f91f902f64860d8c955b3fedabea1 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.2E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_18005 090f91f902f64860d8c955b3fedabea1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 4.8E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_18005 090f91f902f64860d8c955b3fedabea1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 4.8E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_18005 090f91f902f64860d8c955b3fedabea1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 4.8E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_18005 090f91f902f64860d8c955b3fedabea1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 4.8E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_18005 090f91f902f64860d8c955b3fedabea1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 4.8E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_18005 090f91f902f64860d8c955b3fedabea1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.8E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_18005 090f91f902f64860d8c955b3fedabea1 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 193 0.0038 T 14-10-2018 DA442_18005 090f91f902f64860d8c955b3fedabea1 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DA442_10215 0ce0ce80d863549341c3df844c5f9dd9 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 125 3.0E-18 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DA442_10215 0ce0ce80d863549341c3df844c5f9dd9 138 Gene3D G3DSA:3.10.180.10 2 132 1.5E-34 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DA442_10215 0ce0ce80d863549341c3df844c5f9dd9 138 SUPERFAMILY SSF54593 3 129 3.62E-29 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DA442_04460 2b44f15fe054601eb69ef281a111be30 261 Gene3D G3DSA:1.10.3470.10 28 260 2.9E-8 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DA442_04460 2b44f15fe054601eb69ef281a111be30 261 Pfam PF00950 ABC 3 transport family 1 256 3.2E-74 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 DA442_04460 2b44f15fe054601eb69ef281a111be30 261 SUPERFAMILY SSF81345 2 253 5.36E-38 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DA442_19240 23ea31a8561ecef0837c26a1f91ca158 636 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 202 359 2.9E-11 T 14-10-2018 IPR000160 GGDEF domain DA442_19240 23ea31a8561ecef0837c26a1f91ca158 636 SMART SM00052 372 617 2.4E-96 T 14-10-2018 IPR001633 EAL domain DA442_19240 23ea31a8561ecef0837c26a1f91ca158 636 Gene3D G3DSA:3.30.450.40 12 166 3.2E-11 T 14-10-2018 IPR029016 GAF-like domain superfamily DA442_19240 23ea31a8561ecef0837c26a1f91ca158 636 Pfam PF13185 GAF domain 42 143 1.5E-7 T 14-10-2018 IPR003018 GAF domain GO:0005515 DA442_19240 23ea31a8561ecef0837c26a1f91ca158 636 SMART SM00065 14 161 1.6E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 DA442_19240 23ea31a8561ecef0837c26a1f91ca158 636 SMART SM00267 192 362 6.7E-8 T 14-10-2018 IPR000160 GGDEF domain DA442_19240 23ea31a8561ecef0837c26a1f91ca158 636 SUPERFAMILY SSF141868 377 626 1.44E-83 T 14-10-2018 IPR035919 EAL domain superfamily DA442_19240 23ea31a8561ecef0837c26a1f91ca158 636 Gene3D G3DSA:3.20.20.450 371 630 2.7E-88 T 14-10-2018 IPR035919 EAL domain superfamily DA442_19240 23ea31a8561ecef0837c26a1f91ca158 636 Gene3D G3DSA:3.30.70.270 189 362 1.0E-18 T 14-10-2018 DA442_19240 23ea31a8561ecef0837c26a1f91ca158 636 Pfam PF00990 Diguanylate cyclase, GGDEF domain 204 356 1.5E-13 T 14-10-2018 IPR000160 GGDEF domain DA442_19240 23ea31a8561ecef0837c26a1f91ca158 636 SUPERFAMILY SSF55073 209 363 1.26E-17 T 14-10-2018 IPR029787 Nucleotide cyclase DA442_19240 23ea31a8561ecef0837c26a1f91ca158 636 Pfam PF00563 EAL domain 380 612 9.5E-69 T 14-10-2018 IPR001633 EAL domain DA442_19240 23ea31a8561ecef0837c26a1f91ca158 636 SUPERFAMILY SSF55781 15 158 4.32E-19 T 14-10-2018 DA442_01665 2ee90d13d826453522ffd68d9b6e13d2 212 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 44 197 9.7E-68 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DA442_01665 2ee90d13d826453522ffd68d9b6e13d2 212 Gene3D G3DSA:3.30.1060.10 3 212 1.0E-91 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DA442_01665 2ee90d13d826453522ffd68d9b6e13d2 212 Pfam PF01625 Peptide methionine sulfoxide reductase 44 197 4.5E-68 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DA442_01665 2ee90d13d826453522ffd68d9b6e13d2 212 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 42 203 38.218 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DA442_01665 2ee90d13d826453522ffd68d9b6e13d2 212 SUPERFAMILY SSF55068 3 207 2.49E-80 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DA442_15990 c1aeab424169dbb0484a4472c18f64c3 375 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 10 344 1.8E-153 T 14-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 DA442_15990 c1aeab424169dbb0484a4472c18f64c3 375 Pfam PF08331 Domain of unknown function (DUF1730) 58 136 3.3E-23 T 14-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 DA442_15990 c1aeab424169dbb0484a4472c18f64c3 375 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 3 311 50.999 T 14-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 DA442_15990 c1aeab424169dbb0484a4472c18f64c3 375 Pfam PF13484 4Fe-4S double cluster binding domain 188 252 1.7E-19 T 14-10-2018 DA442_15990 c1aeab424169dbb0484a4472c18f64c3 375 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 189 200 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DA442_15990 c1aeab424169dbb0484a4472c18f64c3 375 SUPERFAMILY SSF54862 165 315 1.67E-19 T 14-10-2018 DA442_12375 c8ad86365ad68ed5a26ab06f2e43f22d 699 Pfam PF00771 FHIPEP family 32 689 2.9E-270 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DA442_12375 c8ad86365ad68ed5a26ab06f2e43f22d 699 PIRSF PIRSF005419 10 699 3.7E-253 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DA442_12375 c8ad86365ad68ed5a26ab06f2e43f22d 699 Gene3D G3DSA:3.40.30.60 365 508 7.2E-54 T 14-10-2018 DA442_12375 c8ad86365ad68ed5a26ab06f2e43f22d 699 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 14-10-2018 IPR025505 FHIPEP conserved site DA442_12375 c8ad86365ad68ed5a26ab06f2e43f22d 699 Gene3D G3DSA:1.10.8.540 509 596 1.3E-23 T 14-10-2018 DA442_12375 c8ad86365ad68ed5a26ab06f2e43f22d 699 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 696 6.3E-267 T 14-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 DA442_12375 c8ad86365ad68ed5a26ab06f2e43f22d 699 Gene3D G3DSA:1.10.490.80 600 697 6.5E-15 T 14-10-2018 DA442_12375 c8ad86365ad68ed5a26ab06f2e43f22d 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 3.7E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DA442_12375 c8ad86365ad68ed5a26ab06f2e43f22d 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 3.7E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DA442_12375 c8ad86365ad68ed5a26ab06f2e43f22d 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 3.7E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DA442_12375 c8ad86365ad68ed5a26ab06f2e43f22d 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 3.7E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DA442_12375 c8ad86365ad68ed5a26ab06f2e43f22d 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 3.7E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DA442_12375 c8ad86365ad68ed5a26ab06f2e43f22d 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 3.7E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DA442_21830 17219cdea0ccda59d3f195f97ff9c391 527 SUPERFAMILY SSF55073 374 524 2.28E-36 T 14-10-2018 IPR029787 Nucleotide cyclase DA442_21830 17219cdea0ccda59d3f195f97ff9c391 527 Gene3D G3DSA:1.25.40.10 21 347 9.7E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_21830 17219cdea0ccda59d3f195f97ff9c391 527 SMART SM00267 358 526 1.4E-30 T 14-10-2018 IPR000160 GGDEF domain DA442_21830 17219cdea0ccda59d3f195f97ff9c391 527 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 366 524 5.2E-34 T 14-10-2018 IPR000160 GGDEF domain DA442_21830 17219cdea0ccda59d3f195f97ff9c391 527 SUPERFAMILY SSF48452 41 222 1.33E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_21830 17219cdea0ccda59d3f195f97ff9c391 527 Gene3D G3DSA:3.30.70.270 355 526 1.8E-43 T 14-10-2018 DA442_21830 17219cdea0ccda59d3f195f97ff9c391 527 Pfam PF00990 Diguanylate cyclase, GGDEF domain 370 522 7.0E-33 T 14-10-2018 IPR000160 GGDEF domain DA442_05180 fc1333f4bddac08923c0f74664701605 166 Gene3D G3DSA:1.10.3190.10 54 166 1.7E-36 T 14-10-2018 IPR023146 YfbU, alpha-helical bundle domain superfamily DA442_05180 fc1333f4bddac08923c0f74664701605 166 Pfam PF03887 YfbU domain 1 166 2.2E-70 T 14-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU DA442_05180 fc1333f4bddac08923c0f74664701605 166 SUPERFAMILY SSF116960 1 166 1.22E-65 T 14-10-2018 DA442_05180 fc1333f4bddac08923c0f74664701605 166 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 166 37.917 T 14-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU DA442_05180 fc1333f4bddac08923c0f74664701605 166 Gene3D G3DSA:1.10.287.680 1 53 9.2E-33 T 14-10-2018 IPR023145 YfbU, helix-hairpin domain superfamily DA442_05180 fc1333f4bddac08923c0f74664701605 166 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 166 8.0E-96 T 14-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU DA442_05180 fc1333f4bddac08923c0f74664701605 166 PIRSF PIRSF006272 1 166 7.9E-79 T 14-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU DA442_12750 4175b6e0951ef89a36e07b9c9beb1da3 343 SUPERFAMILY SSF51161 32 316 8.11E-84 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily DA442_12750 4175b6e0951ef89a36e07b9c9beb1da3 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 179 1.6E-7 T 14-10-2018 IPR001451 Hexapeptide repeat DA442_12750 4175b6e0951ef89a36e07b9c9beb1da3 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 144 8.7E-9 T 14-10-2018 IPR001451 Hexapeptide repeat DA442_12750 4175b6e0951ef89a36e07b9c9beb1da3 343 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 23 88 5.4E-23 T 14-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 DA442_12750 4175b6e0951ef89a36e07b9c9beb1da3 343 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 5 326 34.606 T 14-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 DA442_12750 4175b6e0951ef89a36e07b9c9beb1da3 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 201 233 0.15 T 14-10-2018 IPR001451 Hexapeptide repeat DA442_12750 4175b6e0951ef89a36e07b9c9beb1da3 343 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 4.0E-115 T 14-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 DA442_12750 4175b6e0951ef89a36e07b9c9beb1da3 343 Gene3D G3DSA:3.40.1390.10 1 99 1.4E-31 T 14-10-2018 DA442_12750 4175b6e0951ef89a36e07b9c9beb1da3 343 Gene3D G3DSA:2.160.10.10 100 308 2.3E-62 T 14-10-2018 DA442_12430 78c416f069d4360c702facd26e043609 439 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 24 435 3.9E-194 T 14-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DA442_12430 78c416f069d4360c702facd26e043609 439 SMART SM00382 158 342 4.8E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_12430 78c416f069d4360c702facd26e043609 439 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 348 357 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DA442_12430 78c416f069d4360c702facd26e043609 439 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 21 437 2.3E-174 T 14-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DA442_12430 78c416f069d4360c702facd26e043609 439 Gene3D G3DSA:3.40.50.12240 17 439 2.0E-156 T 14-10-2018 DA442_12430 78c416f069d4360c702facd26e043609 439 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 146 357 3.5E-73 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DA442_12430 78c416f069d4360c702facd26e043609 439 SUPERFAMILY SSF52540 93 362 5.04E-96 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_25920 1f559b6b5af3732a83eb0ffbcb4eb13c 208 PRINTS PR01021 OMPA domain signature 134 149 1.1E-7 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DA442_25920 1f559b6b5af3732a83eb0ffbcb4eb13c 208 PRINTS PR01021 OMPA domain signature 104 126 1.1E-7 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DA442_25920 1f559b6b5af3732a83eb0ffbcb4eb13c 208 PRINTS PR01021 OMPA domain signature 149 165 1.1E-7 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DA442_25920 1f559b6b5af3732a83eb0ffbcb4eb13c 208 Pfam PF00691 OmpA family 104 198 1.7E-17 T 14-10-2018 IPR006665 OmpA-like domain DA442_25920 1f559b6b5af3732a83eb0ffbcb4eb13c 208 Gene3D G3DSA:3.30.1330.60 65 207 1.1E-30 T 14-10-2018 IPR036737 OmpA-like domain superfamily DA442_25920 1f559b6b5af3732a83eb0ffbcb4eb13c 208 SUPERFAMILY SSF103088 92 204 4.45E-30 T 14-10-2018 IPR036737 OmpA-like domain superfamily DA442_07725 64696bb76ae2f32ae5d13baf9e48fb63 579 SUPERFAMILY SSF90123 7 320 7.85E-74 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DA442_07725 64696bb76ae2f32ae5d13baf9e48fb63 579 Pfam PF00664 ABC transporter transmembrane region 21 291 3.4E-44 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DA442_07725 64696bb76ae2f32ae5d13baf9e48fb63 579 Pfam PF00005 ABC transporter 352 500 3.6E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_07725 64696bb76ae2f32ae5d13baf9e48fb63 579 Gene3D G3DSA:3.40.50.300 335 579 2.0E-74 T 14-10-2018 DA442_07725 64696bb76ae2f32ae5d13baf9e48fb63 579 SUPERFAMILY SSF52540 337 571 3.72E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_07725 64696bb76ae2f32ae5d13baf9e48fb63 579 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_07725 64696bb76ae2f32ae5d13baf9e48fb63 579 Gene3D G3DSA:1.20.1560.10 5 318 8.1E-76 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DA442_07725 64696bb76ae2f32ae5d13baf9e48fb63 579 SMART SM00382 361 547 2.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_14550 c3b7a982cf4ba04917f422397c2b71a5 225 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 8 222 4.3E-75 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 DA442_14550 c3b7a982cf4ba04917f422397c2b71a5 225 SMART SM00535 20 148 6.3E-56 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 DA442_14550 c3b7a982cf4ba04917f422397c2b71a5 225 SUPERFAMILY SSF54768 108 222 5.19E-29 T 14-10-2018 DA442_14550 c3b7a982cf4ba04917f422397c2b71a5 225 Gene3D G3DSA:3.30.160.20 153 224 3.7E-20 T 14-10-2018 DA442_14550 c3b7a982cf4ba04917f422397c2b71a5 225 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 DA442_14550 c3b7a982cf4ba04917f422397c2b71a5 225 Pfam PF00035 Double-stranded RNA binding motif 155 222 5.8E-16 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain DA442_14550 c3b7a982cf4ba04917f422397c2b71a5 225 Pfam PF14622 Ribonuclease-III-like 20 140 3.4E-33 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 DA442_14550 c3b7a982cf4ba04917f422397c2b71a5 225 Gene3D G3DSA:1.10.1520.10 2 146 1.0E-44 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 DA442_14550 c3b7a982cf4ba04917f422397c2b71a5 225 SMART SM00358 155 223 1.4E-22 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain DA442_14550 c3b7a982cf4ba04917f422397c2b71a5 225 SUPERFAMILY SSF69065 5 158 6.98E-50 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 DA442_14550 c3b7a982cf4ba04917f422397c2b71a5 225 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 30.029 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 DA442_24070 78fa420956c75b3efc814227570868c0 640 Gene3D G3DSA:1.20.58.930 372 467 3.3E-235 T 14-10-2018 DA442_24070 78fa420956c75b3efc814227570868c0 640 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 340 359 2.2E-12 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DA442_24070 78fa420956c75b3efc814227570868c0 640 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 549 562 2.2E-12 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DA442_24070 78fa420956c75b3efc814227570868c0 640 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 246 259 2.2E-12 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DA442_24070 78fa420956c75b3efc814227570868c0 640 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 102 120 2.2E-12 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DA442_24070 78fa420956c75b3efc814227570868c0 640 SUPERFAMILY SSF51419 70 352 3.11E-64 T 14-10-2018 IPR029066 PLP-binding barrel DA442_24070 78fa420956c75b3efc814227570868c0 640 PIRSF PIRSF001336 2 640 4.0E-251 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 DA442_24070 78fa420956c75b3efc814227570868c0 640 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 83 350 1.1E-49 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 DA442_24070 78fa420956c75b3efc814227570868c0 640 Gene3D G3DSA:2.40.37.10 18 575 3.3E-235 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DA442_24070 78fa420956c75b3efc814227570868c0 640 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 7 639 42.377 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 DA442_24070 78fa420956c75b3efc814227570868c0 640 Gene3D G3DSA:3.20.20.10 71 355 3.3E-235 T 14-10-2018 IPR029066 PLP-binding barrel DA442_24070 78fa420956c75b3efc814227570868c0 640 PRINTS PR01180 Arginine decarboxylase signature 94 108 2.4E-63 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 DA442_24070 78fa420956c75b3efc814227570868c0 640 PRINTS PR01180 Arginine decarboxylase signature 153 168 2.4E-63 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 DA442_24070 78fa420956c75b3efc814227570868c0 640 PRINTS PR01180 Arginine decarboxylase signature 203 225 2.4E-63 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 DA442_24070 78fa420956c75b3efc814227570868c0 640 PRINTS PR01180 Arginine decarboxylase signature 549 570 2.4E-63 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 DA442_24070 78fa420956c75b3efc814227570868c0 640 PRINTS PR01180 Arginine decarboxylase signature 179 200 2.4E-63 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 DA442_24070 78fa420956c75b3efc814227570868c0 640 PRINTS PR01180 Arginine decarboxylase signature 330 347 2.4E-63 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 DA442_24070 78fa420956c75b3efc814227570868c0 640 PRINTS PR01180 Arginine decarboxylase signature 471 492 2.4E-63 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 DA442_24070 78fa420956c75b3efc814227570868c0 640 PRINTS PR01180 Arginine decarboxylase signature 70 85 2.4E-63 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 DA442_24070 78fa420956c75b3efc814227570868c0 640 PRINTS PR01180 Arginine decarboxylase signature 496 521 2.4E-63 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 DA442_24070 78fa420956c75b3efc814227570868c0 640 TIGRFAM TIGR01273 speA: arginine decarboxylase 12 638 3.1E-267 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 DA442_14990 9d5745119227f07e72e91c69c171931c 427 SMART SM00495 332 378 6.7E-4 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 DA442_14990 9d5745119227f07e72e91c69c171931c 427 SMART SM00495 381 427 4.0 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 DA442_14990 9d5745119227f07e72e91c69c171931c 427 Pfam PF01522 Polysaccharide deacetylase 23 126 1.1E-12 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 DA442_14990 9d5745119227f07e72e91c69c171931c 427 Gene3D G3DSA:2.10.10.90 333 427 1.2E-34 T 14-10-2018 DA442_14990 9d5745119227f07e72e91c69c171931c 427 Gene3D G3DSA:3.20.20.370 26 332 1.1E-106 T 14-10-2018 DA442_14990 9d5745119227f07e72e91c69c171931c 427 SUPERFAMILY SSF51055 383 426 1.07E-14 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 DA442_14990 9d5745119227f07e72e91c69c171931c 427 SUPERFAMILY SSF51055 334 377 1.83E-13 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 DA442_14990 9d5745119227f07e72e91c69c171931c 427 SUPERFAMILY SSF88713 29 336 3.34E-26 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DA442_05715 541627b2229ec423df8eaf6775b793d2 88 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 36 68 2.2E-13 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 DA442_05715 541627b2229ec423df8eaf6775b793d2 88 SUPERFAMILY SSF57716 38 71 5.13E-7 T 14-10-2018 DA442_05715 541627b2229ec423df8eaf6775b793d2 88 Gene3D G3DSA:1.20.120.910 1 73 8.8E-23 T 14-10-2018 DA442_08390 6bb26c15b447687c565aad338a8a219b 668 Gene3D G3DSA:2.30.42.10 236 320 5.3E-11 T 14-10-2018 DA442_08390 6bb26c15b447687c565aad338a8a219b 668 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 530 662 3.2E-39 T 14-10-2018 IPR020992 Tail specific protease, C-terminal DA442_08390 6bb26c15b447687c565aad338a8a219b 668 SMART SM00245 326 527 1.9E-61 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 DA442_08390 6bb26c15b447687c565aad338a8a219b 668 Gene3D G3DSA:3.90.226.10 325 544 4.1E-57 T 14-10-2018 DA442_08390 6bb26c15b447687c565aad338a8a219b 668 SUPERFAMILY SSF52096 166 531 4.31E-73 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DA442_08390 6bb26c15b447687c565aad338a8a219b 668 SUPERFAMILY SSF50156 217 338 4.15E-14 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 DA442_08390 6bb26c15b447687c565aad338a8a219b 668 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 239 320 3.9E-12 T 14-10-2018 IPR001478 PDZ domain GO:0005515 DA442_08390 6bb26c15b447687c565aad338a8a219b 668 SMART SM00228 246 323 1.2E-6 T 14-10-2018 IPR001478 PDZ domain GO:0005515 DA442_08390 6bb26c15b447687c565aad338a8a219b 668 Pfam PF03572 Peptidase family S41 356 525 2.9E-51 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 DA442_08390 6bb26c15b447687c565aad338a8a219b 668 Pfam PF08180 B melanoma antigen family 9 36 6.0E-15 T 14-10-2018 IPR012530 B melanoma antigen-like DA442_08390 6bb26c15b447687c565aad338a8a219b 668 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 199 547 4.1E-112 T 14-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 DA442_02590 5daae2d69a391b3b4e308b8bc4644751 407 Pfam PF00270 DEAD/DEAH box helicase 27 195 4.7E-45 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DA442_02590 5daae2d69a391b3b4e308b8bc4644751 407 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DA442_02590 5daae2d69a391b3b4e308b8bc4644751 407 Pfam PF00271 Helicase conserved C-terminal domain 235 341 2.5E-31 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_02590 5daae2d69a391b3b4e308b8bc4644751 407 Gene3D G3DSA:3.40.50.300 217 407 3.1E-52 T 14-10-2018 DA442_02590 5daae2d69a391b3b4e308b8bc4644751 407 SUPERFAMILY SSF52540 76 358 1.12E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_02590 5daae2d69a391b3b4e308b8bc4644751 407 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 3 407 49.707 T 14-10-2018 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 DA442_02590 5daae2d69a391b3b4e308b8bc4644751 407 Gene3D G3DSA:3.40.50.300 1 211 1.7E-70 T 14-10-2018 DA442_02590 5daae2d69a391b3b4e308b8bc4644751 407 SMART SM00487 22 222 3.4E-55 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DA442_02590 5daae2d69a391b3b4e308b8bc4644751 407 SMART SM00490 260 341 1.3E-31 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_20260 2d776847cac1e3a2432566fca11b315b 335 Gene3D G3DSA:1.10.260.40 3 60 4.9E-22 T 14-10-2018 DA442_20260 2d776847cac1e3a2432566fca11b315b 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 4.7E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DA442_20260 2d776847cac1e3a2432566fca11b315b 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 4.7E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DA442_20260 2d776847cac1e3a2432566fca11b315b 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 46 3.1E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DA442_20260 2d776847cac1e3a2432566fca11b315b 335 SUPERFAMILY SSF53822 61 332 6.71E-95 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DA442_20260 2d776847cac1e3a2432566fca11b315b 335 Pfam PF13377 Periplasmic binding protein-like domain 171 331 2.4E-43 T 14-10-2018 DA442_20260 2d776847cac1e3a2432566fca11b315b 335 Gene3D G3DSA:3.40.50.2300 70 323 6.3E-89 T 14-10-2018 DA442_20260 2d776847cac1e3a2432566fca11b315b 335 SMART SM00354 1 72 6.3E-34 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DA442_20260 2d776847cac1e3a2432566fca11b315b 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 DA442_20260 2d776847cac1e3a2432566fca11b315b 335 Gene3D G3DSA:3.40.50.2300 162 291 6.3E-89 T 14-10-2018 DA442_20260 2d776847cac1e3a2432566fca11b315b 335 SUPERFAMILY SSF47413 1 60 1.31E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DA442_02615 6fdeccda94182fd7c182fae07b812feb 262 Gene3D G3DSA:3.40.30.10 103 261 8.9E-45 T 14-10-2018 DA442_02615 6fdeccda94182fd7c182fae07b812feb 262 SUPERFAMILY SSF54423 44 100 4.19E-14 T 14-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 DA442_02615 6fdeccda94182fd7c182fae07b812feb 262 Gene3D G3DSA:3.10.450.70 38 102 5.0E-18 T 14-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 DA442_02615 6fdeccda94182fd7c182fae07b812feb 262 Pfam PF10411 Disulfide bond isomerase protein N-terminus 49 99 1.0E-12 T 14-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal DA442_02615 6fdeccda94182fd7c182fae07b812feb 262 SUPERFAMILY SSF52833 122 261 3.95E-38 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_02615 6fdeccda94182fd7c182fae07b812feb 262 Pfam PF13098 Thioredoxin-like domain 131 259 5.5E-25 T 14-10-2018 IPR012336 Thioredoxin-like fold DA442_04155 d6a45a5c758c9addc834acf104499245 378 Pfam PF07196 Flagellin hook IN motif 195 249 6.0E-11 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 DA442_04155 d6a45a5c758c9addc834acf104499245 378 Gene3D G3DSA:1.10.8.410 330 377 3.1E-20 T 14-10-2018 DA442_04155 d6a45a5c758c9addc834acf104499245 378 Gene3D G3DSA:1.20.1330.10 191 329 3.8E-18 T 14-10-2018 DA442_04155 d6a45a5c758c9addc834acf104499245 378 PRINTS PR00207 Flagellin signature 37 54 2.5E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DA442_04155 d6a45a5c758c9addc834acf104499245 378 PRINTS PR00207 Flagellin signature 111 134 2.5E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DA442_04155 d6a45a5c758c9addc834acf104499245 378 PRINTS PR00207 Flagellin signature 76 95 2.5E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DA442_04155 d6a45a5c758c9addc834acf104499245 378 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 8.4E-42 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DA442_04155 d6a45a5c758c9addc834acf104499245 378 Gene3D G3DSA:1.20.1330.10 45 177 1.1E-72 T 14-10-2018 DA442_04155 d6a45a5c758c9addc834acf104499245 378 Gene3D G3DSA:1.20.58.1830 5 33 1.1E-72 T 14-10-2018 DA442_04155 d6a45a5c758c9addc834acf104499245 378 Pfam PF00700 Bacterial flagellin C-terminal helical region 293 377 8.3E-26 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DA442_04155 d6a45a5c758c9addc834acf104499245 378 SUPERFAMILY SSF64518 1 377 1.31E-95 T 14-10-2018 DA442_23650 aafb167ec31466b9c76e96a84f737ead 206 Gene3D G3DSA:3.40.50.1000 9 196 8.4E-31 T 14-10-2018 IPR023214 HAD superfamily DA442_23650 aafb167ec31466b9c76e96a84f737ead 206 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 9 192 5.3E-25 T 14-10-2018 DA442_23650 aafb167ec31466b9c76e96a84f737ead 206 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 9 195 3.5E-33 T 14-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like DA442_23650 aafb167ec31466b9c76e96a84f737ead 206 SUPERFAMILY SSF56784 7 195 4.52E-22 T 14-10-2018 IPR036412 HAD-like superfamily DA442_23650 aafb167ec31466b9c76e96a84f737ead 206 Gene3D G3DSA:1.20.1440.100 21 93 8.4E-31 T 14-10-2018 DA442_23650 aafb167ec31466b9c76e96a84f737ead 206 Pfam PF12710 haloacid dehalogenase-like hydrolase 10 190 8.7E-31 T 14-10-2018 DA442_07435 bf7f0c81f26f4860d7c4e143589415be 158 SUPERFAMILY SSF55729 1 155 6.52E-36 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_07435 bf7f0c81f26f4860d7c4e143589415be 158 Pfam PF13673 Acetyltransferase (GNAT) domain 30 149 1.4E-17 T 14-10-2018 IPR000182 GNAT domain DA442_07435 bf7f0c81f26f4860d7c4e143589415be 158 Gene3D G3DSA:3.40.630.30 1 158 1.6E-42 T 14-10-2018 DA442_06520 810af036702acc256655ca9c79cd0bdb 153 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 109 153 2.0E-20 T 14-10-2018 DA442_06520 810af036702acc256655ca9c79cd0bdb 153 Gene3D G3DSA:1.20.120.1630 3 153 6.3E-23 T 14-10-2018 DA442_06520 810af036702acc256655ca9c79cd0bdb 153 Pfam PF04191 Phospholipid methyltransferase 40 142 1.5E-12 T 14-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 DA442_09245 7a89c47b3d8e272dce7fb8e086b0aa45 288 Gene3D G3DSA:3.60.110.10 1 286 7.1E-107 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DA442_09245 7a89c47b3d8e272dce7fb8e086b0aa45 288 TIGRFAM TIGR03381 agmatine_aguB: N-carbamoylputrescine amidase 5 282 2.7E-143 T 14-10-2018 IPR017755 N-carbamoylputrescine amidase GO:0006596|GO:0050126 KEGG: 00330+3.5.1.53|MetaCyc: PWY-43 DA442_09245 7a89c47b3d8e272dce7fb8e086b0aa45 288 SUPERFAMILY SSF56317 4 281 3.4E-83 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DA442_09245 7a89c47b3d8e272dce7fb8e086b0aa45 288 Pfam PF00795 Carbon-nitrogen hydrolase 8 266 3.2E-58 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 DA442_19155 9d839e4dae3adee3a9c92e869561d305 580 Gene3D G3DSA:3.90.780.10 370 578 3.5E-34 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_19155 9d839e4dae3adee3a9c92e869561d305 580 Pfam PF02872 5'-nucleotidase, C-terminal domain 388 539 1.9E-23 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_19155 9d839e4dae3adee3a9c92e869561d305 580 Pfam PF00149 Calcineurin-like phosphoesterase 13 252 1.3E-8 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DA442_19155 9d839e4dae3adee3a9c92e869561d305 580 SUPERFAMILY SSF56300 11 327 1.54E-74 T 14-10-2018 DA442_19155 9d839e4dae3adee3a9c92e869561d305 580 Gene3D G3DSA:3.60.21.10 2 369 7.5E-87 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like DA442_19155 9d839e4dae3adee3a9c92e869561d305 580 SUPERFAMILY SSF55816 369 564 2.88E-37 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_19155 9d839e4dae3adee3a9c92e869561d305 580 PRINTS PR01607 Apyrase family signature 235 258 1.1E-13 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_19155 9d839e4dae3adee3a9c92e869561d305 580 PRINTS PR01607 Apyrase family signature 514 533 1.1E-13 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_19155 9d839e4dae3adee3a9c92e869561d305 580 PRINTS PR01607 Apyrase family signature 275 295 1.1E-13 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_19155 9d839e4dae3adee3a9c92e869561d305 580 PRINTS PR01607 Apyrase family signature 10 28 1.1E-13 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_19155 9d839e4dae3adee3a9c92e869561d305 580 PRINTS PR01607 Apyrase family signature 216 233 1.1E-13 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_15285 af89a236a0ae23ed04579ffa3fd3b4b1 237 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 25 2.6E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DA442_15285 af89a236a0ae23ed04579ffa3fd3b4b1 237 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 1.6E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DA442_22860 94021cc5e11868957e776d13c107e963 208 Pfam PF00188 Cysteine-rich secretory protein family 77 204 6.3E-18 T 14-10-2018 IPR014044 CAP domain DA442_22860 94021cc5e11868957e776d13c107e963 208 SUPERFAMILY SSF55797 70 205 7.33E-20 T 14-10-2018 IPR035940 CAP superfamily DA442_22860 94021cc5e11868957e776d13c107e963 208 Gene3D G3DSA:3.40.33.10 45 206 2.7E-45 T 14-10-2018 IPR035940 CAP superfamily DA442_17190 cbd82e738fa799b2e15433d01a031807 255 SUPERFAMILY SSF110399 1 236 1.07E-86 T 14-10-2018 DA442_17190 cbd82e738fa799b2e15433d01a031807 255 Pfam PF05690 Thiazole biosynthesis protein ThiG 3 247 5.8E-111 T 14-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 DA442_17190 cbd82e738fa799b2e15433d01a031807 255 Gene3D G3DSA:3.20.20.70 1 253 1.3E-111 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_17190 cbd82e738fa799b2e15433d01a031807 255 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 43.187 T 14-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 DA442_09105 3eb171d2ec71a2f527e96bb8ec2649f1 319 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 7 298 5.8E-86 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 DA442_09105 3eb171d2ec71a2f527e96bb8ec2649f1 319 PIRSF PIRSF026649 4 307 2.9E-89 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 DA442_09105 3eb171d2ec71a2f527e96bb8ec2649f1 319 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 6 307 46.781 T 14-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 DA442_09105 3eb171d2ec71a2f527e96bb8ec2649f1 319 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 7 307 1.1E-140 T 14-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 DA442_07475 3f6570e55e90eebbbbbfec59bd2a5188 293 Pfam PF13353 4Fe-4S single cluster domain 21 145 2.1E-7 T 14-10-2018 DA442_07475 3f6570e55e90eebbbbbfec59bd2a5188 293 TIGRFAM TIGR04041 activase_YjjW: glycine radical enzyme activase, YjjW family 10 286 5.3E-125 T 14-10-2018 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW DA442_07475 3f6570e55e90eebbbbbfec59bd2a5188 293 ProSitePatterns PS01087 Radical activating enzymes signature. 23 44 - T 14-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 DA442_07475 3f6570e55e90eebbbbbfec59bd2a5188 293 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 51 62 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DA442_07475 3f6570e55e90eebbbbbfec59bd2a5188 293 Pfam PF04055 Radical SAM superfamily 29 225 2.4E-14 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DA442_07475 3f6570e55e90eebbbbbfec59bd2a5188 293 SUPERFAMILY SSF54862 28 144 2.1E-16 T 14-10-2018 DA442_07475 3f6570e55e90eebbbbbfec59bd2a5188 293 SUPERFAMILY SSF102114 83 278 4.32E-10 T 14-10-2018 DA442_07475 3f6570e55e90eebbbbbfec59bd2a5188 293 Gene3D G3DSA:3.20.20.70 7 60 8.1E-12 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_07475 3f6570e55e90eebbbbbfec59bd2a5188 293 Gene3D G3DSA:3.20.20.70 62 282 1.1E-32 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_07475 3f6570e55e90eebbbbbfec59bd2a5188 293 PIRSF PIRSF000371 1 293 1.3E-100 T 14-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 DA442_25225 e39c640d4055bc9817b6cf37e9cc4078 382 Pfam PF00155 Aminotransferase class I and II 26 375 4.3E-31 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DA442_25225 e39c640d4055bc9817b6cf37e9cc4078 382 SUPERFAMILY SSF53383 3 380 9.85E-90 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_25225 e39c640d4055bc9817b6cf37e9cc4078 382 Gene3D G3DSA:3.40.640.10 60 273 3.3E-110 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_25225 e39c640d4055bc9817b6cf37e9cc4078 382 Gene3D G3DSA:3.90.1150.10 15 378 3.3E-110 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DA442_15645 f4c0472d30f0260c2550d7ad0c0e03d8 242 Pfam PF08534 Redoxin 5 160 6.6E-33 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 DA442_15645 f4c0472d30f0260c2550d7ad0c0e03d8 242 PRINTS PR00160 Glutaredoxin signature 173 191 3.3E-14 T 14-10-2018 IPR014025 Glutaredoxin subgroup DA442_15645 f4c0472d30f0260c2550d7ad0c0e03d8 242 PRINTS PR00160 Glutaredoxin signature 228 241 3.3E-14 T 14-10-2018 IPR014025 Glutaredoxin subgroup DA442_15645 f4c0472d30f0260c2550d7ad0c0e03d8 242 PRINTS PR00160 Glutaredoxin signature 214 227 3.3E-14 T 14-10-2018 IPR014025 Glutaredoxin subgroup DA442_15645 f4c0472d30f0260c2550d7ad0c0e03d8 242 Gene3D G3DSA:3.40.30.10 4 165 7.7E-63 T 14-10-2018 DA442_15645 f4c0472d30f0260c2550d7ad0c0e03d8 242 Pfam PF00462 Glutaredoxin 173 231 4.3E-18 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 DA442_15645 f4c0472d30f0260c2550d7ad0c0e03d8 242 SUPERFAMILY SSF52833 3 241 4.66E-48 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_15645 f4c0472d30f0260c2550d7ad0c0e03d8 242 ProSitePatterns PS00195 Glutaredoxin active site. 175 191 - T 14-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 DA442_15645 f4c0472d30f0260c2550d7ad0c0e03d8 242 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 164 242 2.1E-42 T 14-10-2018 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 DA442_15645 f4c0472d30f0260c2550d7ad0c0e03d8 242 Gene3D G3DSA:3.40.30.10 171 241 2.8E-23 T 14-10-2018 DA442_06070 ba689eb0ac61a7f4291d2ba1ac9ae91f 402 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 199 213 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DA442_06070 ba689eb0ac61a7f4291d2ba1ac9ae91f 402 Gene3D G3DSA:3.40.640.10 3 255 1.0E-77 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_06070 ba689eb0ac61a7f4291d2ba1ac9ae91f 402 SUPERFAMILY SSF53383 22 388 1.63E-98 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_06070 ba689eb0ac61a7f4291d2ba1ac9ae91f 402 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 7 389 6.9E-171 T 14-10-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 DA442_06070 ba689eb0ac61a7f4291d2ba1ac9ae91f 402 PIRSF PIRSF001434 1 391 2.2E-124 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DA442_06070 ba689eb0ac61a7f4291d2ba1ac9ae91f 402 Gene3D G3DSA:3.90.1150.10 256 391 4.9E-40 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DA442_06070 ba689eb0ac61a7f4291d2ba1ac9ae91f 402 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 387 1.2E-116 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DA442_07805 2a5a7fb1180be726e639b3f47e3f94be 209 Pfam PF12800 4Fe-4S binding domain 14 28 0.039 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DA442_07805 2a5a7fb1180be726e639b3f47e3f94be 209 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 102 113 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DA442_07805 2a5a7fb1180be726e639b3f47e3f94be 209 Gene3D G3DSA:3.30.70.20 1 198 8.8E-55 T 14-10-2018 DA442_07805 2a5a7fb1180be726e639b3f47e3f94be 209 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 6 166 1.4E-83 T 14-10-2018 IPR014297 Dimethylsulphoxide reductase, chain B DA442_07805 2a5a7fb1180be726e639b3f47e3f94be 209 SUPERFAMILY SSF54862 1 202 7.95E-70 T 14-10-2018 DA442_07805 2a5a7fb1180be726e639b3f47e3f94be 209 Pfam PF13247 4Fe-4S dicluster domain 61 156 2.5E-30 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DA442_22295 52127ef1c33665a8de25aacb338c9e5e 289 SUPERFAMILY SSF103481 39 139 1.11E-7 T 14-10-2018 DA442_22295 52127ef1c33665a8de25aacb338c9e5e 289 Pfam PF00892 EamA-like transporter family 146 275 6.9E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DA442_22295 52127ef1c33665a8de25aacb338c9e5e 289 SUPERFAMILY SSF103481 184 280 6.8E-11 T 14-10-2018 DA442_08400 ad7229119e0eafa23545bf8aed31969e 157 Gene3D G3DSA:3.30.450.40 2 157 1.3E-63 T 14-10-2018 IPR029016 GAF-like domain superfamily DA442_08400 ad7229119e0eafa23545bf8aed31969e 157 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 89 106 - T 14-10-2018 IPR000614 Free Met sulfoxide reductase conserved site DA442_08400 ad7229119e0eafa23545bf8aed31969e 157 Pfam PF13185 GAF domain 30 146 2.6E-9 T 14-10-2018 IPR003018 GAF domain GO:0005515 DA442_08400 ad7229119e0eafa23545bf8aed31969e 157 SUPERFAMILY SSF55781 4 145 1.61E-39 T 14-10-2018 DA442_25780 f5d73f6a97da844f0e11d71aa86bdfb0 295 SUPERFAMILY SSF46785 7 88 1.67E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_25780 f5d73f6a97da844f0e11d71aa86bdfb0 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 3.1E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_25780 f5d73f6a97da844f0e11d71aa86bdfb0 295 SUPERFAMILY SSF53850 89 291 1.25E-29 T 14-10-2018 DA442_25780 f5d73f6a97da844f0e11d71aa86bdfb0 295 Gene3D G3DSA:3.40.190.10 164 261 8.1E-42 T 14-10-2018 DA442_25780 f5d73f6a97da844f0e11d71aa86bdfb0 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.9E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_25780 f5d73f6a97da844f0e11d71aa86bdfb0 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.9E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_25780 f5d73f6a97da844f0e11d71aa86bdfb0 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.9E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_25780 f5d73f6a97da844f0e11d71aa86bdfb0 295 Pfam PF03466 LysR substrate binding domain 88 289 1.3E-28 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_25780 f5d73f6a97da844f0e11d71aa86bdfb0 295 Gene3D G3DSA:3.40.190.10 92 286 8.1E-42 T 14-10-2018 DA442_25780 f5d73f6a97da844f0e11d71aa86bdfb0 295 Gene3D G3DSA:1.10.10.10 3 89 8.2E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_25785 e5f631fb6b4d2f862ac92947b8880c6b 397 SUPERFAMILY SSF103473 4 387 3.4E-58 T 14-10-2018 IPR036259 MFS transporter superfamily DA442_25785 e5f631fb6b4d2f862ac92947b8880c6b 397 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 6 377 1.1E-60 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 DA442_25785 e5f631fb6b4d2f862ac92947b8880c6b 397 Pfam PF07690 Major Facilitator Superfamily 17 349 1.7E-47 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DA442_25785 e5f631fb6b4d2f862ac92947b8880c6b 397 Gene3D G3DSA:1.20.1720.10 6 381 3.9E-84 T 14-10-2018 DA442_12345 014a27542a9d32f44c0eb097a00295d4 750 SMART SM00387 465 608 1.0E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_12345 014a27542a9d32f44c0eb097a00295d4 750 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 468 607 3.0E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_12345 014a27542a9d32f44c0eb097a00295d4 750 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 361 420 5.3E-12 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 DA442_12345 014a27542a9d32f44c0eb097a00295d4 750 SUPERFAMILY SSF50341 607 741 2.88E-30 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 DA442_12345 014a27542a9d32f44c0eb097a00295d4 750 SUPERFAMILY SSF47226 6 129 3.53E-30 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 DA442_12345 014a27542a9d32f44c0eb097a00295d4 750 Pfam PF01627 Hpt domain 8 100 6.7E-17 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 DA442_12345 014a27542a9d32f44c0eb097a00295d4 750 Gene3D G3DSA:1.10.287.560 361 420 3.2E-19 T 14-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 DA442_12345 014a27542a9d32f44c0eb097a00295d4 750 SUPERFAMILY SSF55874 423 606 5.24E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_12345 014a27542a9d32f44c0eb097a00295d4 750 PRINTS PR00344 Bacterial sensor protein C-terminal signature 592 605 9.7E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_12345 014a27542a9d32f44c0eb097a00295d4 750 PRINTS PR00344 Bacterial sensor protein C-terminal signature 568 586 9.7E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_12345 014a27542a9d32f44c0eb097a00295d4 750 PRINTS PR00344 Bacterial sensor protein C-terminal signature 552 562 9.7E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_12345 014a27542a9d32f44c0eb097a00295d4 750 PRINTS PR00344 Bacterial sensor protein C-terminal signature 510 524 9.7E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_12345 014a27542a9d32f44c0eb097a00295d4 750 SUPERFAMILY SSF47384 362 421 7.45E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DA442_12345 014a27542a9d32f44c0eb097a00295d4 750 Pfam PF01584 CheW-like domain 614 743 1.9E-22 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DA442_12345 014a27542a9d32f44c0eb097a00295d4 750 SMART SM00073 6 103 3.3E-20 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 DA442_12345 014a27542a9d32f44c0eb097a00295d4 750 Gene3D G3DSA:1.20.120.160 2 142 1.1E-35 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 DA442_12345 014a27542a9d32f44c0eb097a00295d4 750 SMART SM00260 600 741 4.6E-34 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DA442_12345 014a27542a9d32f44c0eb097a00295d4 750 Gene3D G3DSA:2.30.30.40 608 737 4.5E-35 T 14-10-2018 DA442_12345 014a27542a9d32f44c0eb097a00295d4 750 Gene3D G3DSA:3.30.565.10 421 607 5.9E-56 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_12345 014a27542a9d32f44c0eb097a00295d4 750 SMART SM01231 360 420 3.2E-17 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 DA442_12345 014a27542a9d32f44c0eb097a00295d4 750 Gene3D G3DSA:2.40.50.180 631 696 4.5E-35 T 14-10-2018 DA442_02545 b7cf1a1bd63ee07e9855fb28bedcd31d 426 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 87 366 5.4E-23 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DA442_02545 b7cf1a1bd63ee07e9855fb28bedcd31d 426 Gene3D G3DSA:3.40.50.1100 101 399 9.4E-138 T 14-10-2018 DA442_02545 b7cf1a1bd63ee07e9855fb28bedcd31d 426 Pfam PF14821 Threonine synthase N terminus 8 78 3.5E-8 T 14-10-2018 IPR029144 Threonine synthase, N-terminal DA442_02545 b7cf1a1bd63ee07e9855fb28bedcd31d 426 Gene3D G3DSA:3.40.50.1100 83 392 9.4E-138 T 14-10-2018 DA442_02545 b7cf1a1bd63ee07e9855fb28bedcd31d 426 TIGRFAM TIGR00260 thrC: threonine synthase 51 388 9.0E-115 T 14-10-2018 IPR004450 Threonine synthase-like DA442_02545 b7cf1a1bd63ee07e9855fb28bedcd31d 426 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 95 109 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 DA442_02545 b7cf1a1bd63ee07e9855fb28bedcd31d 426 SUPERFAMILY SSF53686 1 424 1.57E-132 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DA442_02545 b7cf1a1bd63ee07e9855fb28bedcd31d 426 Gene3D G3DSA:3.90.1380.10 1 79 1.3E-31 T 14-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily DA442_02255 b4367cbfde6eb74c78cfd6a73a0327d8 142 Pfam PF00572 Ribosomal protein L13 15 138 2.5E-57 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 DA442_02255 b4367cbfde6eb74c78cfd6a73a0327d8 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 8.9E-66 T 14-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_02255 b4367cbfde6eb74c78cfd6a73a0327d8 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 14-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 DA442_02255 b4367cbfde6eb74c78cfd6a73a0327d8 142 Gene3D G3DSA:3.90.1180.10 1 142 1.4E-64 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 DA442_02255 b4367cbfde6eb74c78cfd6a73a0327d8 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.809 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 DA442_02255 b4367cbfde6eb74c78cfd6a73a0327d8 142 PIRSF PIRSF002181 1 142 4.3E-53 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 DA442_02255 b4367cbfde6eb74c78cfd6a73a0327d8 142 SUPERFAMILY SSF52161 1 140 1.24E-60 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 DA442_00555 d78a07f61ae01a5c4f85b02c8735be07 930 Gene3D G3DSA:3.40.50.1010 9 284 1.2E-94 T 14-10-2018 DA442_00555 d78a07f61ae01a5c4f85b02c8735be07 930 SMART SM00475 7 267 6.2E-122 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 DA442_00555 d78a07f61ae01a5c4f85b02c8735be07 930 Gene3D G3DSA:3.30.70.370 665 926 7.1E-114 T 14-10-2018 DA442_00555 d78a07f61ae01a5c4f85b02c8735be07 930 TIGRFAM TIGR00593 pola: DNA polymerase I 9 930 4.5E-287 T 14-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_00555 d78a07f61ae01a5c4f85b02c8735be07 930 SUPERFAMILY SSF53098 334 519 7.17E-55 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DA442_00555 d78a07f61ae01a5c4f85b02c8735be07 930 SMART SM00482 687 894 8.4E-116 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_00555 d78a07f61ae01a5c4f85b02c8735be07 930 SMART SM00474 331 518 2.5E-41 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 DA442_00555 d78a07f61ae01a5c4f85b02c8735be07 930 Gene3D G3DSA:1.20.1060.10 544 659 2.4E-44 T 14-10-2018 DA442_00555 d78a07f61ae01a5c4f85b02c8735be07 930 SUPERFAMILY SSF47807 171 291 6.58E-30 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily DA442_00555 d78a07f61ae01a5c4f85b02c8735be07 930 Gene3D G3DSA:3.30.420.10 328 543 1.3E-69 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DA442_00555 d78a07f61ae01a5c4f85b02c8735be07 930 Pfam PF01612 3'-5' exonuclease 331 515 9.1E-40 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 DA442_00555 d78a07f61ae01a5c4f85b02c8735be07 930 ProSitePatterns PS00447 DNA polymerase family A signature. 755 774 - T 14-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_00555 d78a07f61ae01a5c4f85b02c8735be07 930 Gene3D G3DSA:1.10.150.20 710 853 7.1E-114 T 14-10-2018 DA442_00555 d78a07f61ae01a5c4f85b02c8735be07 930 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 271 1.6E-28 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 DA442_00555 d78a07f61ae01a5c4f85b02c8735be07 930 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 3.4E-54 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 DA442_00555 d78a07f61ae01a5c4f85b02c8735be07 930 SMART SM00279 173 208 1.2E-13 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 DA442_00555 d78a07f61ae01a5c4f85b02c8735be07 930 SUPERFAMILY SSF56672 523 930 2.11E-160 T 14-10-2018 DA442_00555 d78a07f61ae01a5c4f85b02c8735be07 930 SUPERFAMILY SSF88723 7 170 8.59E-58 T 14-10-2018 IPR029060 PIN-like domain superfamily DA442_00555 d78a07f61ae01a5c4f85b02c8735be07 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 701 724 3.2E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_00555 d78a07f61ae01a5c4f85b02c8735be07 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 814 825 3.2E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_00555 d78a07f61ae01a5c4f85b02c8735be07 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 846 862 3.2E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_00555 d78a07f61ae01a5c4f85b02c8735be07 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 656 678 3.2E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_00555 d78a07f61ae01a5c4f85b02c8735be07 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 731 744 3.2E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_00555 d78a07f61ae01a5c4f85b02c8735be07 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 755 780 3.2E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_00555 d78a07f61ae01a5c4f85b02c8735be07 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 679 694 3.2E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_00555 d78a07f61ae01a5c4f85b02c8735be07 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 792 803 3.2E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_00555 d78a07f61ae01a5c4f85b02c8735be07 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 877 890 3.2E-78 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_00555 d78a07f61ae01a5c4f85b02c8735be07 930 Gene3D G3DSA:1.10.150.20 174 253 1.2E-94 T 14-10-2018 DA442_00555 d78a07f61ae01a5c4f85b02c8735be07 930 Pfam PF00476 DNA polymerase family A 552 927 5.4E-158 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_17370 e0d877527d25d1f2e161e22dc91cb850 88 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 4.0E-39 T 14-10-2018 IPR009383 Protein of unknown function DUF1040 DA442_17370 e0d877527d25d1f2e161e22dc91cb850 88 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 2.3E-46 T 14-10-2018 IPR009383 Protein of unknown function DUF1040 DA442_17370 e0d877527d25d1f2e161e22dc91cb850 88 Gene3D G3DSA:1.10.1580.20 1 88 3.2E-44 T 14-10-2018 IPR038134 YihD-like superfamily DA442_03070 b529e9240565ccf23b3edc724e246146 315 Pfam PF07549 SecD/SecF GG Motif 35 60 1.1E-10 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site DA442_03070 b529e9240565ccf23b3edc724e246146 315 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 117 282 3.1E-56 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DA442_03070 b529e9240565ccf23b3edc724e246146 315 SUPERFAMILY SSF82866 74 293 2.22E-41 T 14-10-2018 DA442_03070 b529e9240565ccf23b3edc724e246146 315 Gene3D G3DSA:1.20.1640.10 105 300 5.0E-12 T 14-10-2018 DA442_03070 b529e9240565ccf23b3edc724e246146 315 Pfam PF02355 Protein export membrane protein 111 292 4.2E-71 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial DA442_03070 b529e9240565ccf23b3edc724e246146 315 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 39 285 2.9E-86 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 DA442_03070 b529e9240565ccf23b3edc724e246146 315 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 11 296 28.889 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 DA442_03070 b529e9240565ccf23b3edc724e246146 315 PRINTS PR01755 Bacterial translocase SecF protein signature 233 248 3.9E-32 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DA442_03070 b529e9240565ccf23b3edc724e246146 315 PRINTS PR01755 Bacterial translocase SecF protein signature 38 53 3.9E-32 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DA442_03070 b529e9240565ccf23b3edc724e246146 315 PRINTS PR01755 Bacterial translocase SecF protein signature 201 219 3.9E-32 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DA442_03070 b529e9240565ccf23b3edc724e246146 315 PRINTS PR01755 Bacterial translocase SecF protein signature 153 167 3.9E-32 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DA442_05895 fcfa18e88cbf2384b07392c1e8b69324 404 Pfam PF08668 HDOD domain 205 325 4.5E-13 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD DA442_05895 fcfa18e88cbf2384b07392c1e8b69324 404 SUPERFAMILY SSF141868 5 193 8.89E-29 T 14-10-2018 IPR035919 EAL domain superfamily DA442_05895 fcfa18e88cbf2384b07392c1e8b69324 404 Pfam PF00563 EAL domain 72 190 1.4E-15 T 14-10-2018 IPR001633 EAL domain DA442_05895 fcfa18e88cbf2384b07392c1e8b69324 404 Gene3D G3DSA:1.10.3210.10 195 402 1.3E-21 T 14-10-2018 DA442_05895 fcfa18e88cbf2384b07392c1e8b69324 404 SMART SM00052 2 195 6.8E-4 T 14-10-2018 IPR001633 EAL domain DA442_05895 fcfa18e88cbf2384b07392c1e8b69324 404 SUPERFAMILY SSF109604 181 400 2.04E-43 T 14-10-2018 DA442_05895 fcfa18e88cbf2384b07392c1e8b69324 404 PIRSF PIRSF003180 1 403 1.3E-170 T 14-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing DA442_05895 fcfa18e88cbf2384b07392c1e8b69324 404 Gene3D G3DSA:3.20.20.450 3 194 1.5E-18 T 14-10-2018 IPR035919 EAL domain superfamily DA442_10525 bd2efcbf179551397cd322ac7e799f2d 157 SUPERFAMILY SSF55729 7 145 5.07E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_10525 bd2efcbf179551397cd322ac7e799f2d 157 Gene3D G3DSA:3.40.630.30 8 149 2.4E-25 T 14-10-2018 DA442_10525 bd2efcbf179551397cd322ac7e799f2d 157 Pfam PF00583 Acetyltransferase (GNAT) family 39 133 2.0E-14 T 14-10-2018 IPR000182 GNAT domain DA442_02735 37713d47186bf3ad6ecfb34129c20f20 942 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 933 21.505 T 14-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 DA442_02735 37713d47186bf3ad6ecfb34129c20f20 942 SUPERFAMILY SSF47323 657 933 5.98E-75 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DA442_02735 37713d47186bf3ad6ecfb34129c20f20 942 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 645 2.1E-219 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 DA442_02735 37713d47186bf3ad6ecfb34129c20f20 942 Pfam PF06827 Zinc finger found in FPG and IleRS 903 930 3.9E-6 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 DA442_02735 37713d47186bf3ad6ecfb34129c20f20 942 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DA442_02735 37713d47186bf3ad6ecfb34129c20f20 942 SUPERFAMILY SSF52374 4 652 5.36E-138 T 14-10-2018 DA442_02735 37713d47186bf3ad6ecfb34129c20f20 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 5.1E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DA442_02735 37713d47186bf3ad6ecfb34129c20f20 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 241 264 5.1E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DA442_02735 37713d47186bf3ad6ecfb34129c20f20 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 406 421 5.1E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DA442_02735 37713d47186bf3ad6ecfb34129c20f20 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 531 544 5.1E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DA442_02735 37713d47186bf3ad6ecfb34129c20f20 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 566 575 5.1E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DA442_02735 37713d47186bf3ad6ecfb34129c20f20 942 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 848 2.6E-294 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DA442_02735 37713d47186bf3ad6ecfb34129c20f20 942 SUPERFAMILY SSF50677 203 408 5.76E-55 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DA442_02735 37713d47186bf3ad6ecfb34129c20f20 942 Pfam PF08264 Anticodon-binding domain of tRNA 690 844 5.4E-27 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 DA442_02735 37713d47186bf3ad6ecfb34129c20f20 942 Gene3D G3DSA:3.40.50.620 25 634 2.0E-241 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DA442_02735 37713d47186bf3ad6ecfb34129c20f20 942 Gene3D G3DSA:1.10.730.20 645 934 3.2E-86 T 14-10-2018 DA442_02735 37713d47186bf3ad6ecfb34129c20f20 942 Gene3D G3DSA:3.90.740.10 195 413 2.0E-241 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DA442_02845 4bf940c6f3703d8491fc2c090b8d2908 108 SUPERFAMILY SSF69754 1 103 1.11E-29 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like DA442_02845 4bf940c6f3703d8491fc2c090b8d2908 108 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 99 5.0E-31 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 DA442_02845 4bf940c6f3703d8491fc2c090b8d2908 108 Gene3D G3DSA:3.30.160.100 1 105 1.9E-33 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like DA442_02845 4bf940c6f3703d8491fc2c090b8d2908 108 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 92 5.1E-23 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 DA442_21255 0654b955cba6d0217699f2a43aa5d6cc 311 Gene3D G3DSA:3.30.360.10 119 311 3.4E-57 T 14-10-2018 DA442_21255 0654b955cba6d0217699f2a43aa5d6cc 311 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 119 1.2E-14 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DA442_21255 0654b955cba6d0217699f2a43aa5d6cc 311 SUPERFAMILY SSF51735 1 165 5.81E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_21255 0654b955cba6d0217699f2a43aa5d6cc 311 Gene3D G3DSA:3.40.50.720 1 118 4.6E-27 T 14-10-2018 DA442_21255 0654b955cba6d0217699f2a43aa5d6cc 311 SUPERFAMILY SSF55347 121 264 2.68E-48 T 14-10-2018 DA442_23060 41bf153cd7892fa41cb5c7c1caab4569 1043 Gene3D G3DSA:3.20.20.220 150 525 9.9E-132 T 14-10-2018 DA442_23060 41bf153cd7892fa41cb5c7c1caab4569 1043 Pfam PF00171 Aldehyde dehydrogenase family 585 1034 1.3E-116 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DA442_23060 41bf153cd7892fa41cb5c7c1caab4569 1043 SUPERFAMILY SSF51730 190 532 5.1E-116 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like DA442_23060 41bf153cd7892fa41cb5c7c1caab4569 1043 Pfam PF01619 Proline dehydrogenase 197 490 5.2E-94 T 14-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 DA442_23060 41bf153cd7892fa41cb5c7c1caab4569 1043 SUPERFAMILY SSF81935 17 188 3.4E-64 T 14-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 DA442_23060 41bf153cd7892fa41cb5c7c1caab4569 1043 Gene3D G3DSA:3.40.605.10 549 1034 8.8E-147 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DA442_23060 41bf153cd7892fa41cb5c7c1caab4569 1043 PIRSF PIRSF000197 3 1042 0.0 T 14-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 DA442_23060 41bf153cd7892fa41cb5c7c1caab4569 1043 SUPERFAMILY SSF53720 559 1034 2.09E-125 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DA442_23060 41bf153cd7892fa41cb5c7c1caab4569 1043 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 526 1034 1.6E-243 T 14-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 DA442_23060 41bf153cd7892fa41cb5c7c1caab4569 1043 Gene3D G3DSA:3.40.309.10 813 1005 8.8E-147 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DA442_23060 41bf153cd7892fa41cb5c7c1caab4569 1043 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 838 849 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DA442_23060 41bf153cd7892fa41cb5c7c1caab4569 1043 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 73 187 8.1E-46 T 14-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 DA442_16505 cda334a293b3d23a3e3f3888cd7efbe5 429 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 421 3.1E-29 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DA442_16505 cda334a293b3d23a3e3f3888cd7efbe5 429 SUPERFAMILY SSF56059 104 322 3.18E-68 T 14-10-2018 DA442_16505 cda334a293b3d23a3e3f3888cd7efbe5 429 SMART SM01210 330 423 2.7E-55 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DA442_16505 cda334a293b3d23a3e3f3888cd7efbe5 429 Gene3D G3DSA:3.90.600.10 330 429 7.3E-35 T 14-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DA442_16505 cda334a293b3d23a3e3f3888cd7efbe5 429 SUPERFAMILY SSF52440 1 103 7.91E-37 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DA442_16505 cda334a293b3d23a3e3f3888cd7efbe5 429 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 3.9E-35 T 14-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DA442_16505 cda334a293b3d23a3e3f3888cd7efbe5 429 SUPERFAMILY SSF51246 329 424 3.4E-33 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 DA442_16505 cda334a293b3d23a3e3f3888cd7efbe5 429 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 1.4E-186 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DA442_16505 cda334a293b3d23a3e3f3888cd7efbe5 429 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 44.35 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DA442_16505 cda334a293b3d23a3e3f3888cd7efbe5 429 Gene3D G3DSA:3.30.1490.20 121 190 2.9E-29 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DA442_16505 cda334a293b3d23a3e3f3888cd7efbe5 429 Gene3D G3DSA:3.40.50.20 2 95 1.1E-37 T 14-10-2018 DA442_16505 cda334a293b3d23a3e3f3888cd7efbe5 429 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 14-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DA442_16505 cda334a293b3d23a3e3f3888cd7efbe5 429 SMART SM01209 103 296 1.5E-142 T 14-10-2018 DA442_16505 cda334a293b3d23a3e3f3888cd7efbe5 429 Gene3D G3DSA:3.30.470.20 191 329 1.9E-62 T 14-10-2018 DA442_16505 cda334a293b3d23a3e3f3888cd7efbe5 429 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 9.4E-83 T 14-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DA442_03030 ad20daf92603b9769e14f1f9b58621c1 436 PIRSF PIRSF001362 1 436 2.3E-224 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 DA442_03030 ad20daf92603b9769e14f1f9b58621c1 436 Gene3D G3DSA:3.20.20.60 1 419 1.1E-182 T 14-10-2018 DA442_03030 ad20daf92603b9769e14f1f9b58621c1 436 Pfam PF00463 Isocitrate lyase family 14 257 5.9E-62 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 DA442_03030 ad20daf92603b9769e14f1f9b58621c1 436 Pfam PF00463 Isocitrate lyase family 258 436 9.1E-53 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 DA442_03030 ad20daf92603b9769e14f1f9b58621c1 436 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 258 436 2.9E-90 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 DA442_03030 ad20daf92603b9769e14f1f9b58621c1 436 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 10 257 1.3E-113 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 DA442_03030 ad20daf92603b9769e14f1f9b58621c1 436 SUPERFAMILY SSF51621 6 436 4.93E-153 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DA442_03030 ad20daf92603b9769e14f1f9b58621c1 436 ProSitePatterns PS00161 Isocitrate lyase signature. 195 200 - T 14-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 DA442_24945 e49932c8903efac86253eef561b29261 1052 Gene3D G3DSA:3.30.2090.10 180 270 1.4E-256 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DA442_24945 e49932c8903efac86253eef561b29261 1052 Gene3D G3DSA:3.30.70.1430 559 659 1.4E-256 T 14-10-2018 DA442_24945 e49932c8903efac86253eef561b29261 1052 SUPERFAMILY SSF82866 792 1019 2.35E-49 T 14-10-2018 DA442_24945 e49932c8903efac86253eef561b29261 1052 Gene3D G3DSA:3.30.70.1430 46 803 1.4E-256 T 14-10-2018 DA442_24945 e49932c8903efac86253eef561b29261 1052 SUPERFAMILY SSF82714 185 266 2.88E-14 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DA442_24945 e49932c8903efac86253eef561b29261 1052 Gene3D G3DSA:1.20.1640.10 16 501 1.4E-256 T 14-10-2018 DA442_24945 e49932c8903efac86253eef561b29261 1052 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 3.0E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_24945 e49932c8903efac86253eef561b29261 1052 PRINTS PR00702 Acriflavin resistance protein family signature 16 40 3.0E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_24945 e49932c8903efac86253eef561b29261 1052 PRINTS PR00702 Acriflavin resistance protein family signature 44 62 3.0E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_24945 e49932c8903efac86253eef561b29261 1052 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 3.0E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_24945 e49932c8903efac86253eef561b29261 1052 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 3.0E-24 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_24945 e49932c8903efac86253eef561b29261 1052 Gene3D G3DSA:3.30.70.1320 139 327 1.4E-256 T 14-10-2018 DA442_24945 e49932c8903efac86253eef561b29261 1052 SUPERFAMILY SSF82714 719 793 3.27E-7 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DA442_24945 e49932c8903efac86253eef561b29261 1052 SUPERFAMILY SSF82693 150 325 2.27E-9 T 14-10-2018 DA442_24945 e49932c8903efac86253eef561b29261 1052 SUPERFAMILY SSF82693 46 138 5.75E-19 T 14-10-2018 DA442_24945 e49932c8903efac86253eef561b29261 1052 Gene3D G3DSA:3.30.70.1440 660 856 1.4E-256 T 14-10-2018 DA442_24945 e49932c8903efac86253eef561b29261 1052 Pfam PF00873 AcrB/AcrD/AcrF family 9 1016 6.1E-163 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_24945 e49932c8903efac86253eef561b29261 1052 Gene3D G3DSA:3.30.2090.10 708 795 1.4E-256 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DA442_24945 e49932c8903efac86253eef561b29261 1052 Gene3D G3DSA:1.20.1640.10 502 1013 1.4E-256 T 14-10-2018 DA442_24945 e49932c8903efac86253eef561b29261 1052 SUPERFAMILY SSF82866 292 488 1.01E-36 T 14-10-2018 DA442_05775 23a3d85cecbbb61700fab84c16c666c4 418 PIRSF PIRSF003085 25 418 2.9E-119 T 14-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 DA442_05775 23a3d85cecbbb61700fab84c16c666c4 418 Gene3D G3DSA:3.40.50.150 149 418 1.4E-99 T 14-10-2018 DA442_05775 23a3d85cecbbb61700fab84c16c666c4 418 Pfam PF02353 Mycolic acid cyclopropane synthetase 142 411 2.0E-78 T 14-10-2018 DA442_05775 23a3d85cecbbb61700fab84c16c666c4 418 SUPERFAMILY SSF53335 21 371 1.07E-88 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_10730 ba464c0666e77b0f66d02abe6b52e710 243 Pfam PF00929 Exonuclease 54 224 4.4E-13 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DA442_10730 ba464c0666e77b0f66d02abe6b52e710 243 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 48 233 1.2E-22 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_10730 ba464c0666e77b0f66d02abe6b52e710 243 Gene3D G3DSA:3.30.420.10 48 234 1.2E-37 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DA442_10730 ba464c0666e77b0f66d02abe6b52e710 243 SMART SM00479 52 233 2.6E-21 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DA442_10730 ba464c0666e77b0f66d02abe6b52e710 243 SUPERFAMILY SSF53098 44 231 3.92E-39 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DA442_00345 360be8b7b3c6cd494376e4de6ef38b6b 285 Pfam PF01048 Phosphorylase superfamily 35 281 3.2E-43 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 DA442_00345 360be8b7b3c6cd494376e4de6ef38b6b 285 Gene3D G3DSA:3.40.50.1580 2 284 2.2E-103 T 14-10-2018 DA442_00345 360be8b7b3c6cd494376e4de6ef38b6b 285 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 87 128 - T 14-10-2018 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 DA442_00345 360be8b7b3c6cd494376e4de6ef38b6b 285 SUPERFAMILY SSF53167 18 283 8.62E-83 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 DA442_00345 360be8b7b3c6cd494376e4de6ef38b6b 285 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 35 281 3.5E-99 T 14-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 DA442_00345 360be8b7b3c6cd494376e4de6ef38b6b 285 TIGRFAM TIGR01699 XAPA: xanthosine phosphorylase 35 282 2.6E-122 T 14-10-2018 IPR010943 Xanthosine phosphorylase GO:0004731|GO:0005737|GO:0055086 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 DA442_00345 360be8b7b3c6cd494376e4de6ef38b6b 285 PIRSF PIRSF000477 5 284 7.0E-104 T 14-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 DA442_20835 6e3e8f6d8816c51030706e69f346c794 375 SUPERFAMILY SSF111369 49 290 5.49E-63 T 14-10-2018 DA442_20835 6e3e8f6d8816c51030706e69f346c794 375 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 53 283 2.6E-14 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DA442_20835 6e3e8f6d8816c51030706e69f346c794 375 Gene3D G3DSA:1.10.287.470 93 166 1.4E-74 T 14-10-2018 DA442_20835 6e3e8f6d8816c51030706e69f346c794 375 Gene3D G3DSA:2.40.50.100 58 201 1.4E-74 T 14-10-2018 DA442_20835 6e3e8f6d8816c51030706e69f346c794 375 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 368 1.1E-84 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DA442_20835 6e3e8f6d8816c51030706e69f346c794 375 Gene3D G3DSA:2.40.30.170 52 276 1.4E-74 T 14-10-2018 DA442_20835 6e3e8f6d8816c51030706e69f346c794 375 Gene3D G3DSA:2.40.420.20 277 368 1.9E-21 T 14-10-2018 DA442_17550 49380bd17e3b8efda40d0dd26f9fe8dc 156 Pfam PF02661 Fic/DOC family 13 89 1.9E-7 T 14-10-2018 IPR003812 Fido domain DA442_17550 49380bd17e3b8efda40d0dd26f9fe8dc 156 SUPERFAMILY SSF140931 10 106 2.49E-6 T 14-10-2018 IPR036597 Fido-like domain superfamily DA442_17550 49380bd17e3b8efda40d0dd26f9fe8dc 156 Gene3D G3DSA:1.20.120.1870 10 138 1.2E-25 T 14-10-2018 DA442_17550 49380bd17e3b8efda40d0dd26f9fe8dc 156 TIGRFAM TIGR01550 DOC_P1: death-on-curing family protein 18 120 8.0E-13 T 14-10-2018 IPR006440 Death on curing protein GO:0016301 DA442_13010 0792b7ef3dd227da9f059aef34438608 452 Pfam PF14344 Domain of unknown function (DUF4397) 247 369 1.8E-16 T 14-10-2018 IPR025510 Domain of unknown function DUF4397 DA442_13010 0792b7ef3dd227da9f059aef34438608 452 Pfam PF14344 Domain of unknown function (DUF4397) 31 153 6.9E-17 T 14-10-2018 IPR025510 Domain of unknown function DUF4397 DA442_13010 0792b7ef3dd227da9f059aef34438608 452 Pfam PF14344 Domain of unknown function (DUF4397) 138 227 2.1E-11 T 14-10-2018 IPR025510 Domain of unknown function DUF4397 DA442_10960 9225d5e0ead0746171d601be346cdb29 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.8E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_10960 9225d5e0ead0746171d601be346cdb29 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.8E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_10960 9225d5e0ead0746171d601be346cdb29 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.8E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_10960 9225d5e0ead0746171d601be346cdb29 214 SUPERFAMILY SSF52172 2 132 1.18E-33 T 14-10-2018 IPR011006 CheY-like superfamily DA442_10960 9225d5e0ead0746171d601be346cdb29 214 Pfam PF00072 Response regulator receiver domain 4 116 3.2E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_10960 9225d5e0ead0746171d601be346cdb29 214 SMART SM00421 146 203 2.0E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_10960 9225d5e0ead0746171d601be346cdb29 214 SMART SM00448 2 115 8.3E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_10960 9225d5e0ead0746171d601be346cdb29 214 Gene3D G3DSA:3.40.50.12740 2 209 7.5E-60 T 14-10-2018 DA442_10960 9225d5e0ead0746171d601be346cdb29 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 1.8E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_10960 9225d5e0ead0746171d601be346cdb29 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_10960 9225d5e0ead0746171d601be346cdb29 214 SUPERFAMILY SSF46894 136 210 1.39E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DA442_24105 b463f87e96cf374a5e2eeb489b73e638 288 Pfam PF12833 Helix-turn-helix domain 202 280 7.5E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_24105 b463f87e96cf374a5e2eeb489b73e638 288 SUPERFAMILY SSF51215 27 96 4.97E-7 T 14-10-2018 IPR037923 Transcription regulator HTH-like DA442_24105 b463f87e96cf374a5e2eeb489b73e638 288 SUPERFAMILY SSF46689 180 227 5.97E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_24105 b463f87e96cf374a5e2eeb489b73e638 288 SMART SM00342 196 279 6.0E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_24105 b463f87e96cf374a5e2eeb489b73e638 288 Pfam PF02311 AraC-like ligand binding domain 26 98 1.0E-4 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 DA442_24105 b463f87e96cf374a5e2eeb489b73e638 288 Gene3D G3DSA:1.10.10.60 178 228 7.1E-8 T 14-10-2018 DA442_24105 b463f87e96cf374a5e2eeb489b73e638 288 SUPERFAMILY SSF46689 232 283 9.41E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_24105 b463f87e96cf374a5e2eeb489b73e638 288 Gene3D G3DSA:1.10.10.60 229 285 3.3E-16 T 14-10-2018 DA442_19330 f870066b77c495705c05bdee562c8335 103 Gene3D G3DSA:3.30.780.10 23 103 2.9E-33 T 14-10-2018 DA442_19330 f870066b77c495705c05bdee562c8335 103 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 3 103 1.3E-39 T 14-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 DA442_19330 f870066b77c495705c05bdee562c8335 103 Pfam PF01253 Translation initiation factor SUI1 27 96 2.3E-19 T 14-10-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 DA442_19330 f870066b77c495705c05bdee562c8335 103 SUPERFAMILY SSF55159 3 99 3.66E-27 T 14-10-2018 IPR036877 SUI1 domain superfamily GO:0003743|GO:0006413 DA442_19330 f870066b77c495705c05bdee562c8335 103 PIRSF PIRSF037511 1 103 8.3E-33 T 14-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 DA442_24465 17ec79ebeee24987f7316a6e9666786d 325 Pfam PF00691 OmpA family 223 307 9.5E-19 T 14-10-2018 IPR006665 OmpA-like domain DA442_24465 17ec79ebeee24987f7316a6e9666786d 325 PRINTS PR01021 OMPA domain signature 243 258 2.7E-6 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DA442_24465 17ec79ebeee24987f7316a6e9666786d 325 PRINTS PR01021 OMPA domain signature 258 274 2.7E-6 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DA442_24465 17ec79ebeee24987f7316a6e9666786d 325 SUPERFAMILY SSF103088 200 313 1.44E-30 T 14-10-2018 IPR036737 OmpA-like domain superfamily DA442_24465 17ec79ebeee24987f7316a6e9666786d 325 Gene3D G3DSA:3.30.1330.60 200 314 1.6E-31 T 14-10-2018 IPR036737 OmpA-like domain superfamily DA442_24465 17ec79ebeee24987f7316a6e9666786d 325 Gene3D G3DSA:2.40.160.20 13 199 2.3E-44 T 14-10-2018 DA442_24465 17ec79ebeee24987f7316a6e9666786d 325 SUPERFAMILY SSF56925 23 181 3.14E-36 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DA442_24465 17ec79ebeee24987f7316a6e9666786d 325 Pfam PF01389 OmpA-like transmembrane domain 23 180 6.4E-23 T 14-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 DA442_03655 3f132e07a5e83c4d841f13e296a0e02e 506 Pfam PF00486 Transcriptional regulatory protein, C terminal 36 111 3.1E-11 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DA442_03655 3f132e07a5e83c4d841f13e296a0e02e 506 SMART SM00862 31 111 7.5E-7 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DA442_03655 3f132e07a5e83c4d841f13e296a0e02e 506 SUPERFAMILY SSF46894 9 112 2.04E-14 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DA442_03655 3f132e07a5e83c4d841f13e296a0e02e 506 Gene3D G3DSA:1.10.10.10 11 120 9.8E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_20580 913bfb82dc3e6fe7872e101652894892 220 Pfam PF00034 Cytochrome c 34 129 1.2E-10 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_20580 913bfb82dc3e6fe7872e101652894892 220 Gene3D G3DSA:1.10.760.10 21 130 5.9E-31 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_20580 913bfb82dc3e6fe7872e101652894892 220 PRINTS PR00604 Class IA and IB cytochrome C signature 71 81 6.0E-8 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_20580 913bfb82dc3e6fe7872e101652894892 220 PRINTS PR00604 Class IA and IB cytochrome C signature 85 101 6.0E-8 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_20580 913bfb82dc3e6fe7872e101652894892 220 PRINTS PR00604 Class IA and IB cytochrome C signature 42 49 6.0E-8 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_20580 913bfb82dc3e6fe7872e101652894892 220 PRINTS PR00604 Class IA and IB cytochrome C signature 121 129 6.0E-8 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_20580 913bfb82dc3e6fe7872e101652894892 220 PRINTS PR00604 Class IA and IB cytochrome C signature 55 70 6.0E-8 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_20580 913bfb82dc3e6fe7872e101652894892 220 PRINTS PR00604 Class IA and IB cytochrome C signature 104 114 6.0E-8 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_20580 913bfb82dc3e6fe7872e101652894892 220 Gene3D G3DSA:1.10.760.10 158 218 4.3E-9 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_20580 913bfb82dc3e6fe7872e101652894892 220 SUPERFAMILY SSF46626 33 132 4.88E-25 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_20580 913bfb82dc3e6fe7872e101652894892 220 SUPERFAMILY SSF46626 159 219 2.55E-10 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_21740 7ad8744280ceb95e64e3c20afffafc92 310 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 33 307 3.8E-92 T 14-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 DA442_21740 7ad8744280ceb95e64e3c20afffafc92 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 306 1.2E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DA442_21740 7ad8744280ceb95e64e3c20afffafc92 310 SUPERFAMILY SSF161098 34 305 3.01E-35 T 14-10-2018 IPR035906 MetI-like superfamily DA442_21740 7ad8744280ceb95e64e3c20afffafc92 310 Gene3D G3DSA:1.10.3720.10 79 309 3.3E-32 T 14-10-2018 IPR035906 MetI-like superfamily DA442_17865 7b4a9aff4fefc2c2a0cb4f139e8024d5 488 SMART SM00052 239 481 4.6E-73 T 14-10-2018 IPR001633 EAL domain DA442_17865 7b4a9aff4fefc2c2a0cb4f139e8024d5 488 Pfam PF00563 EAL domain 245 476 2.1E-64 T 14-10-2018 IPR001633 EAL domain DA442_17865 7b4a9aff4fefc2c2a0cb4f139e8024d5 488 Gene3D G3DSA:3.20.20.450 239 485 1.2E-74 T 14-10-2018 IPR035919 EAL domain superfamily DA442_17865 7b4a9aff4fefc2c2a0cb4f139e8024d5 488 SUPERFAMILY SSF141868 246 483 1.83E-71 T 14-10-2018 IPR035919 EAL domain superfamily DA442_17865 7b4a9aff4fefc2c2a0cb4f139e8024d5 488 Pfam PF12792 CSS motif domain associated with EAL 35 120 4.6E-5 T 14-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain DA442_12795 0071870ce5928c693a0a946932941d2e 281 Gene3D G3DSA:1.10.8.10 1 56 2.0E-25 T 14-10-2018 DA442_12795 0071870ce5928c693a0a946932941d2e 281 Hamap MF_00050 Elongation factor Ts [tsf]. 1 280 76.638 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DA442_12795 0071870ce5928c693a0a946932941d2e 281 Gene3D G3DSA:3.30.479.20 57 140 4.8E-27 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 DA442_12795 0071870ce5928c693a0a946932941d2e 281 SUPERFAMILY SSF54713 56 138 1.9E-18 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 DA442_12795 0071870ce5928c693a0a946932941d2e 281 SUPERFAMILY SSF46934 4 54 1.63E-17 T 14-10-2018 IPR009060 UBA-like superfamily GO:0005515 DA442_12795 0071870ce5928c693a0a946932941d2e 281 Gene3D G3DSA:1.10.286.20 185 224 3.1E-22 T 14-10-2018 DA442_12795 0071870ce5928c693a0a946932941d2e 281 SUPERFAMILY SSF54713 142 278 1.22E-45 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 DA442_12795 0071870ce5928c693a0a946932941d2e 281 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DA442_12795 0071870ce5928c693a0a946932941d2e 281 Pfam PF00889 Elongation factor TS 71 261 1.0E-62 T 14-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 DA442_12795 0071870ce5928c693a0a946932941d2e 281 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DA442_12795 0071870ce5928c693a0a946932941d2e 281 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 280 3.7E-104 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DA442_12635 3c5ff459068a7dd048fd0c7d620cc637 281 Gene3D G3DSA:3.60.20.10 1 259 1.8E-98 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DA442_12635 3c5ff459068a7dd048fd0c7d620cc637 281 Pfam PF13230 Glutamine amidotransferases class-II 1 260 1.7E-113 T 14-10-2018 IPR026869 Putative glutamine amidotransferase type 2 DA442_12635 3c5ff459068a7dd048fd0c7d620cc637 281 SUPERFAMILY SSF56235 2 253 2.83E-51 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DA442_24220 f423346553d15d8d7072c1ef09c1cf13 665 SMART SM00283 402 663 5.4E-51 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_24220 f423346553d15d8d7072c1ef09c1cf13 665 Gene3D G3DSA:1.10.287.950 334 665 1.3E-60 T 14-10-2018 DA442_24220 f423346553d15d8d7072c1ef09c1cf13 665 Pfam PF08376 Nitrate and nitrite sensing 59 296 1.3E-36 T 14-10-2018 IPR013587 Nitrate/nitrite sensing protein DA442_24220 f423346553d15d8d7072c1ef09c1cf13 665 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 474 629 6.3E-39 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_24220 f423346553d15d8d7072c1ef09c1cf13 665 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 500 527 4.1E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DA442_24220 f423346553d15d8d7072c1ef09c1cf13 665 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 577 606 4.1E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DA442_24220 f423346553d15d8d7072c1ef09c1cf13 665 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 529 558 4.1E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DA442_24220 f423346553d15d8d7072c1ef09c1cf13 665 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 310 330 4.1E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DA442_24220 f423346553d15d8d7072c1ef09c1cf13 665 SUPERFAMILY SSF58104 355 664 9.94E-63 T 14-10-2018 DA442_06320 a732d9fde2d3435ded1e3dcf5f279ed0 560 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 560 58.141 T 14-10-2018 IPR023017 Transport protein YbjL, putative DA442_06320 a732d9fde2d3435ded1e3dcf5f279ed0 560 Gene3D G3DSA:3.30.70.1450 229 288 1.8E-9 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DA442_06320 a732d9fde2d3435ded1e3dcf5f279ed0 560 SUPERFAMILY SSF116726 294 377 5.36E-10 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DA442_06320 a732d9fde2d3435ded1e3dcf5f279ed0 560 Pfam PF02080 TrkA-C domain 232 281 2.2E-8 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DA442_06320 a732d9fde2d3435ded1e3dcf5f279ed0 560 Pfam PF02080 TrkA-C domain 309 374 1.5E-9 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DA442_06320 a732d9fde2d3435ded1e3dcf5f279ed0 560 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 393 544 1.7E-37 T 14-10-2018 IPR006512 YidE/YbjL duplication DA442_06320 a732d9fde2d3435ded1e3dcf5f279ed0 560 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 172 7.3E-28 T 14-10-2018 IPR006512 YidE/YbjL duplication DA442_06320 a732d9fde2d3435ded1e3dcf5f279ed0 560 Pfam PF06826 Predicted Permease Membrane Region 17 185 2.5E-36 T 14-10-2018 IPR006512 YidE/YbjL duplication DA442_06320 a732d9fde2d3435ded1e3dcf5f279ed0 560 Pfam PF06826 Predicted Permease Membrane Region 389 557 7.6E-43 T 14-10-2018 IPR006512 YidE/YbjL duplication DA442_06320 a732d9fde2d3435ded1e3dcf5f279ed0 560 SUPERFAMILY SSF116726 231 285 2.75E-10 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DA442_19735 766dad4929d127d0c811431cb8f9e3f0 252 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 14 222 5.1E-49 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 DA442_19735 766dad4929d127d0c811431cb8f9e3f0 252 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 11 244 1.4E-94 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DA442_19735 766dad4929d127d0c811431cb8f9e3f0 252 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 91 124 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DA442_19735 766dad4929d127d0c811431cb8f9e3f0 252 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 16 30 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DA442_19735 766dad4929d127d0c811431cb8f9e3f0 252 Gene3D G3DSA:3.30.950.10 127 251 2.1E-44 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 DA442_19735 766dad4929d127d0c811431cb8f9e3f0 252 Gene3D G3DSA:3.40.1010.10 10 126 4.9E-45 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 DA442_19735 766dad4929d127d0c811431cb8f9e3f0 252 SUPERFAMILY SSF53790 7 250 3.93E-79 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 DA442_21950 d58f5d83a5396253682b291c8060627d 238 SMART SM01057 23 236 4.2E-93 T 14-10-2018 IPR001148 Alpha carbonic anhydrase domain DA442_21950 d58f5d83a5396253682b291c8060627d 238 Pfam PF00194 Eukaryotic-type carbonic anhydrase 22 237 2.2E-53 T 14-10-2018 IPR001148 Alpha carbonic anhydrase domain DA442_21950 d58f5d83a5396253682b291c8060627d 238 Gene3D G3DSA:3.10.200.10 22 237 1.6E-84 T 14-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily DA442_21950 d58f5d83a5396253682b291c8060627d 238 SUPERFAMILY SSF51069 22 236 1.67E-75 T 14-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily DA442_00420 8bd9aca101b1cdaebd39175716814eb2 447 SUPERFAMILY SSF46689 354 444 8.6E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_00420 8bd9aca101b1cdaebd39175716814eb2 447 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site DA442_00420 8bd9aca101b1cdaebd39175716814eb2 447 SUPERFAMILY SSF52540 142 379 1.36E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_00420 8bd9aca101b1cdaebd39175716814eb2 447 Pfam PF00158 Sigma-54 interaction domain 142 308 2.2E-67 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DA442_00420 8bd9aca101b1cdaebd39175716814eb2 447 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 427 447 1.5E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DA442_00420 8bd9aca101b1cdaebd39175716814eb2 447 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 410 427 1.5E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DA442_00420 8bd9aca101b1cdaebd39175716814eb2 447 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DA442_00420 8bd9aca101b1cdaebd39175716814eb2 447 Gene3D G3DSA:1.10.8.60 313 377 1.0E-19 T 14-10-2018 DA442_00420 8bd9aca101b1cdaebd39175716814eb2 447 SMART SM00382 162 305 3.8E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_00420 8bd9aca101b1cdaebd39175716814eb2 447 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DA442_00420 8bd9aca101b1cdaebd39175716814eb2 447 Pfam PF02954 Bacterial regulatory protein, Fis family 403 444 1.3E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DA442_00420 8bd9aca101b1cdaebd39175716814eb2 447 Gene3D G3DSA:1.10.10.60 403 445 1.5E-14 T 14-10-2018 DA442_00420 8bd9aca101b1cdaebd39175716814eb2 447 Gene3D G3DSA:3.40.50.300 129 312 4.3E-62 T 14-10-2018 DA442_00420 8bd9aca101b1cdaebd39175716814eb2 447 SUPERFAMILY SSF52172 37 185 3.47E-10 T 14-10-2018 IPR011006 CheY-like superfamily DA442_03420 8ad423a1dddebe2ddb1cfa3ab44edff5 1302 SUPERFAMILY SSF56042 830 1040 7.92E-56 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DA442_03420 8ad423a1dddebe2ddb1cfa3ab44edff5 1302 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1300 0.0 T 14-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DA442_03420 8ad423a1dddebe2ddb1cfa3ab44edff5 1302 Gene3D G3DSA:3.90.650.10 420 606 2.0E-59 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DA442_03420 8ad423a1dddebe2ddb1cfa3ab44edff5 1302 SUPERFAMILY SSF55326 221 428 1.26E-65 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DA442_03420 8ad423a1dddebe2ddb1cfa3ab44edff5 1302 SUPERFAMILY SSF82697 1 150 1.73E-49 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DA442_03420 8ad423a1dddebe2ddb1cfa3ab44edff5 1302 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1302 21.367 T 14-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DA442_03420 8ad423a1dddebe2ddb1cfa3ab44edff5 1302 Gene3D G3DSA:3.30.1330.10 614 812 1.4E-26 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DA442_03420 8ad423a1dddebe2ddb1cfa3ab44edff5 1302 Gene3D G3DSA:3.40.50.880 988 1302 1.4E-141 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DA442_03420 8ad423a1dddebe2ddb1cfa3ab44edff5 1302 SUPERFAMILY SSF52317 1042 1300 2.1E-100 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DA442_03420 8ad423a1dddebe2ddb1cfa3ab44edff5 1302 SMART SM01211 1046 1301 2.6E-160 T 14-10-2018 DA442_03420 8ad423a1dddebe2ddb1cfa3ab44edff5 1302 SUPERFAMILY SSF55326 620 816 6.54E-69 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DA442_03420 8ad423a1dddebe2ddb1cfa3ab44edff5 1302 Gene3D G3DSA:3.30.1330.10 214 419 1.9E-41 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DA442_03420 8ad423a1dddebe2ddb1cfa3ab44edff5 1302 Pfam PF02769 AIR synthase related protein, C-terminal domain 840 973 1.3E-14 T 14-10-2018 IPR010918 PurM-like, C-terminal domain DA442_03420 8ad423a1dddebe2ddb1cfa3ab44edff5 1302 Pfam PF02769 AIR synthase related protein, C-terminal domain 432 589 3.4E-28 T 14-10-2018 IPR010918 PurM-like, C-terminal domain DA442_03420 8ad423a1dddebe2ddb1cfa3ab44edff5 1302 SUPERFAMILY SSF109736 155 220 1.2E-21 T 14-10-2018 DA442_03420 8ad423a1dddebe2ddb1cfa3ab44edff5 1302 Gene3D G3DSA:1.10.8.750 153 213 7.2E-28 T 14-10-2018 DA442_03420 8ad423a1dddebe2ddb1cfa3ab44edff5 1302 Gene3D G3DSA:3.90.650.10 818 987 2.7E-31 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DA442_03420 8ad423a1dddebe2ddb1cfa3ab44edff5 1302 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1046 1299 2.1E-107 T 14-10-2018 DA442_03420 8ad423a1dddebe2ddb1cfa3ab44edff5 1302 SUPERFAMILY SSF56042 430 655 2.24E-53 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DA442_17915 fb75df345b492df7fe3c56a004d5935e 643 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DA442_17915 fb75df345b492df7fe3c56a004d5935e 643 Pfam PF03880 DbpA RNA binding domain 475 542 7.0E-16 T 14-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain DA442_17915 fb75df345b492df7fe3c56a004d5935e 643 Gene3D G3DSA:3.30.70.330 476 545 1.1E-9 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily DA442_17915 fb75df345b492df7fe3c56a004d5935e 643 Pfam PF00271 Helicase conserved C-terminal domain 232 340 6.7E-30 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_17915 fb75df345b492df7fe3c56a004d5935e 643 Gene3D G3DSA:3.40.50.300 215 434 2.2E-53 T 14-10-2018 DA442_17915 fb75df345b492df7fe3c56a004d5935e 643 Pfam PF00270 DEAD/DEAH box helicase 30 195 2.5E-50 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DA442_17915 fb75df345b492df7fe3c56a004d5935e 643 SMART SM00490 259 340 1.3E-34 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_17915 fb75df345b492df7fe3c56a004d5935e 643 SMART SM00487 25 223 2.8E-62 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DA442_17915 fb75df345b492df7fe3c56a004d5935e 643 SUPERFAMILY SSF52540 74 361 3.0E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_17915 fb75df345b492df7fe3c56a004d5935e 643 Gene3D G3DSA:3.40.50.300 1 211 4.3E-74 T 14-10-2018 DA442_17915 fb75df345b492df7fe3c56a004d5935e 643 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 547 41.717 T 14-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 DA442_20450 5da8b2d12803390073c8ddf6f9b8661a 298 SUPERFAMILY SSF51735 1 162 3.57E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_20450 5da8b2d12803390073c8ddf6f9b8661a 298 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 162 1.9E-52 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 DA442_20450 5da8b2d12803390073c8ddf6f9b8661a 298 PIRSF PIRSF000103 1 298 7.4E-85 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 DA442_20450 5da8b2d12803390073c8ddf6f9b8661a 298 SUPERFAMILY SSF48179 163 295 3.74E-40 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DA442_20450 5da8b2d12803390073c8ddf6f9b8661a 298 Gene3D G3DSA:1.10.1040.10 165 298 3.3E-44 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DA442_20450 5da8b2d12803390073c8ddf6f9b8661a 298 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 291 5.0E-32 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 DA442_20450 5da8b2d12803390073c8ddf6f9b8661a 298 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 292 1.8E-131 T 14-10-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 DA442_20450 5da8b2d12803390073c8ddf6f9b8661a 298 Gene3D G3DSA:3.40.50.720 1 164 1.4E-58 T 14-10-2018 DA442_20450 5da8b2d12803390073c8ddf6f9b8661a 298 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 14-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 DA442_06375 234261d568ae564bcb737702e22ba9e3 195 Gene3D G3DSA:1.10.150.20 113 195 1.2E-16 T 14-10-2018 DA442_06375 234261d568ae564bcb737702e22ba9e3 195 Pfam PF04993 TfoX N-terminal domain 11 101 4.7E-23 T 14-10-2018 IPR007076 TfoX, N-terminal DA442_06375 234261d568ae564bcb737702e22ba9e3 195 SUPERFAMILY SSF159894 3 103 1.94E-26 T 14-10-2018 DA442_06375 234261d568ae564bcb737702e22ba9e3 195 Gene3D G3DSA:3.30.1460.30 4 102 2.8E-17 T 14-10-2018 DA442_06375 234261d568ae564bcb737702e22ba9e3 195 Pfam PF04994 TfoX C-terminal domain 114 192 7.8E-28 T 14-10-2018 IPR007077 TfoX, C-terminal DA442_06375 234261d568ae564bcb737702e22ba9e3 195 PIRSF PIRSF028788 6 195 3.0E-35 T 14-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type DA442_11570 2e963b3578914dfa61619ac9f225d09c 149 SMART SM00226 2 148 5.4E-43 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I DA442_11570 2e963b3578914dfa61619ac9f225d09c 149 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 144 7.0E-38 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I DA442_11570 2e963b3578914dfa61619ac9f225d09c 149 SUPERFAMILY SSF52788 1 149 2.49E-48 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily DA442_11570 2e963b3578914dfa61619ac9f225d09c 149 Gene3D G3DSA:3.40.50.2300 1 149 5.3E-58 T 14-10-2018 DA442_11570 2e963b3578914dfa61619ac9f225d09c 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 8.9E-25 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 DA442_11570 2e963b3578914dfa61619ac9f225d09c 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 102 115 8.9E-25 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 DA442_11570 2e963b3578914dfa61619ac9f225d09c 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 8.9E-25 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 DA442_11570 2e963b3578914dfa61619ac9f225d09c 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 120 135 8.9E-25 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 DA442_11570 2e963b3578914dfa61619ac9f225d09c 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 8.9E-25 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 DA442_07965 c5ccb96f2d1e84d40dfde27878226057 64 Pfam PF14255 Cysteine-rich CPXCG 9 59 2.4E-21 T 14-10-2018 IPR025990 Cysteine-rich CPXCG protein DA442_07965 c5ccb96f2d1e84d40dfde27878226057 64 PIRSF PIRSF037225 1 64 5.3E-24 T 14-10-2018 IPR017143 Uncharacterised conserved protein UCP037225 DA442_17110 37dd85cb96cb9b7e3bae63700369d691 611 Pfam PF16124 RecQ zinc-binding 346 407 5.7E-18 T 14-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain DA442_17110 37dd85cb96cb9b7e3bae63700369d691 611 Gene3D G3DSA:3.40.50.300 213 408 3.3E-60 T 14-10-2018 DA442_17110 37dd85cb96cb9b7e3bae63700369d691 611 Pfam PF00271 Helicase conserved C-terminal domain 228 333 4.3E-20 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_17110 37dd85cb96cb9b7e3bae63700369d691 611 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 19 466 8.9E-190 T 14-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 DA442_17110 37dd85cb96cb9b7e3bae63700369d691 611 Gene3D G3DSA:1.10.10.10 409 519 5.7E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_17110 37dd85cb96cb9b7e3bae63700369d691 611 SMART SM00490 253 334 9.3E-29 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_17110 37dd85cb96cb9b7e3bae63700369d691 611 Pfam PF00270 DEAD/DEAH box helicase 31 189 5.5E-19 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DA442_17110 37dd85cb96cb9b7e3bae63700369d691 611 Pfam PF00570 HRDC domain 537 603 2.5E-22 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 DA442_17110 37dd85cb96cb9b7e3bae63700369d691 611 SMART SM00956 414 517 8.9E-51 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 DA442_17110 37dd85cb96cb9b7e3bae63700369d691 611 SUPERFAMILY SSF52540 10 204 9.35E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_17110 37dd85cb96cb9b7e3bae63700369d691 611 Gene3D G3DSA:3.40.50.300 7 211 1.2E-82 T 14-10-2018 DA442_17110 37dd85cb96cb9b7e3bae63700369d691 611 SUPERFAMILY SSF47819 534 609 6.32E-26 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 DA442_17110 37dd85cb96cb9b7e3bae63700369d691 611 SUPERFAMILY SSF52540 211 459 1.36E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_17110 37dd85cb96cb9b7e3bae63700369d691 611 Pfam PF09382 RQC domain 409 517 1.0E-36 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 DA442_17110 37dd85cb96cb9b7e3bae63700369d691 611 SMART SM00341 533 611 2.1E-22 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 DA442_17110 37dd85cb96cb9b7e3bae63700369d691 611 SMART SM00487 25 221 4.8E-29 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DA442_17110 37dd85cb96cb9b7e3bae63700369d691 611 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 17 606 1.5E-253 T 14-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 DA442_17110 37dd85cb96cb9b7e3bae63700369d691 611 Gene3D G3DSA:1.10.150.80 526 610 4.2E-28 T 14-10-2018 DA442_09050 ebb12445966cf44bb0431663a4b53727 218 SUPERFAMILY SSF52172 1 173 5.71E-36 T 14-10-2018 IPR011006 CheY-like superfamily DA442_09050 ebb12445966cf44bb0431663a4b53727 218 Pfam PF00072 Response regulator receiver domain 4 112 6.1E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_09050 ebb12445966cf44bb0431663a4b53727 218 Gene3D G3DSA:1.10.10.10 122 218 4.0E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_09050 ebb12445966cf44bb0431663a4b53727 218 SMART SM00862 145 216 4.5E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DA442_09050 ebb12445966cf44bb0431663a4b53727 218 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 216 7.1E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DA442_09050 ebb12445966cf44bb0431663a4b53727 218 SMART SM00448 1 112 1.1E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_09050 ebb12445966cf44bb0431663a4b53727 218 Gene3D G3DSA:3.40.50.2300 1 121 8.2E-37 T 14-10-2018 DA442_22515 26bb3afd18a483a932239035c1f4fbcf 817 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 656 668 - T 14-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 DA442_22515 26bb3afd18a483a932239035c1f4fbcf 817 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 10 812 0.0 T 14-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 DA442_22515 26bb3afd18a483a932239035c1f4fbcf 817 PIRSF PIRSF000460 1 817 2.6E-214 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 DA442_22515 26bb3afd18a483a932239035c1f4fbcf 817 Pfam PF00343 Carbohydrate phosphorylase 99 812 0.0 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 DA442_22515 26bb3afd18a483a932239035c1f4fbcf 817 Gene3D G3DSA:3.40.50.2000 475 797 9.0E-140 T 14-10-2018 DA442_22515 26bb3afd18a483a932239035c1f4fbcf 817 SUPERFAMILY SSF53756 8 815 0.0 T 14-10-2018 DA442_22515 26bb3afd18a483a932239035c1f4fbcf 817 Gene3D G3DSA:3.40.50.2000 5 474 1.4E-194 T 14-10-2018 DA442_08180 92fb430841f577ddb3ef4e9c0ecacf06 241 Gene3D G3DSA:3.40.50.1220 8 227 2.1E-81 T 14-10-2018 DA442_08180 92fb430841f577ddb3ef4e9c0ecacf06 241 Gene3D G3DSA:3.30.1600.10 22 158 2.1E-81 T 14-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily DA442_08180 92fb430841f577ddb3ef4e9c0ecacf06 241 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 6 236 56.747 T 14-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 DA442_08180 92fb430841f577ddb3ef4e9c0ecacf06 241 Pfam PF02146 Sir2 family 13 186 1.3E-50 T 14-10-2018 IPR003000 Sirtuin family GO:0070403 DA442_08180 92fb430841f577ddb3ef4e9c0ecacf06 241 SUPERFAMILY SSF52467 6 234 2.12E-72 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DA442_21175 673df6a4f38922bd611ef6d3edc0394d 617 SUPERFAMILY SSF103473 7 420 5.84E-25 T 14-10-2018 IPR036259 MFS transporter superfamily DA442_21175 673df6a4f38922bd611ef6d3edc0394d 617 Pfam PF07690 Major Facilitator Superfamily 40 380 3.6E-15 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DA442_21175 673df6a4f38922bd611ef6d3edc0394d 617 Pfam PF01553 Acyltransferase 435 563 3.5E-25 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DA442_21175 673df6a4f38922bd611ef6d3edc0394d 617 SMART SM00563 450 566 1.0E-30 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DA442_21175 673df6a4f38922bd611ef6d3edc0394d 617 SUPERFAMILY SSF69593 382 614 1.83E-31 T 14-10-2018 DA442_21175 673df6a4f38922bd611ef6d3edc0394d 617 Gene3D G3DSA:1.20.1250.20 6 415 1.0E-23 T 14-10-2018 DA442_07210 58c63984ff5e90cda4d12a55cef75c5f 492 Pfam PF02368 Bacterial Ig-like domain (group 2) 180 252 4.2E-8 T 14-10-2018 IPR003343 Bacterial Ig-like, group 2 DA442_07210 58c63984ff5e90cda4d12a55cef75c5f 492 Pfam PF02368 Bacterial Ig-like domain (group 2) 289 349 2.5E-5 T 14-10-2018 IPR003343 Bacterial Ig-like, group 2 DA442_07210 58c63984ff5e90cda4d12a55cef75c5f 492 Gene3D G3DSA:2.60.40.1080 178 272 2.7E-13 T 14-10-2018 DA442_07210 58c63984ff5e90cda4d12a55cef75c5f 492 Gene3D G3DSA:2.60.40.1080 273 369 3.0E-10 T 14-10-2018 DA442_07210 58c63984ff5e90cda4d12a55cef75c5f 492 Gene3D G3DSA:2.60.40.1080 370 466 6.2E-7 T 14-10-2018 DA442_07210 58c63984ff5e90cda4d12a55cef75c5f 492 SMART SM00635 176 260 0.0017 T 14-10-2018 IPR003343 Bacterial Ig-like, group 2 DA442_07210 58c63984ff5e90cda4d12a55cef75c5f 492 SMART SM00635 273 364 17.0 T 14-10-2018 IPR003343 Bacterial Ig-like, group 2 DA442_07210 58c63984ff5e90cda4d12a55cef75c5f 492 SUPERFAMILY SSF49373 275 349 7.3E-7 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments DA442_07210 58c63984ff5e90cda4d12a55cef75c5f 492 SUPERFAMILY SSF49373 175 252 2.98E-10 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments DA442_22730 9f81bf867caec0cf83be9f17197478d1 400 PRINTS PR01182 Ornithine decarboxylase signature 96 120 1.7E-6 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 DA442_22730 9f81bf867caec0cf83be9f17197478d1 400 PRINTS PR01182 Ornithine decarboxylase signature 53 80 1.7E-6 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 DA442_22730 9f81bf867caec0cf83be9f17197478d1 400 PRINTS PR01182 Ornithine decarboxylase signature 365 378 1.7E-6 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 DA442_22730 9f81bf867caec0cf83be9f17197478d1 400 SUPERFAMILY SSF50621 246 398 4.19E-34 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DA442_22730 9f81bf867caec0cf83be9f17197478d1 400 Gene3D G3DSA:2.40.37.10 264 399 1.8E-40 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DA442_22730 9f81bf867caec0cf83be9f17197478d1 400 SUPERFAMILY SSF51419 32 285 1.08E-61 T 14-10-2018 IPR029066 PLP-binding barrel DA442_22730 9f81bf867caec0cf83be9f17197478d1 400 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 283 378 4.3E-14 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 DA442_22730 9f81bf867caec0cf83be9f17197478d1 400 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 187 200 3.0E-8 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DA442_22730 9f81bf867caec0cf83be9f17197478d1 400 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 3.0E-8 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DA442_22730 9f81bf867caec0cf83be9f17197478d1 400 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 75 87 3.0E-8 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DA442_22730 9f81bf867caec0cf83be9f17197478d1 400 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 55 73 3.0E-8 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DA442_22730 9f81bf867caec0cf83be9f17197478d1 400 Gene3D G3DSA:3.20.20.10 34 263 2.8E-46 T 14-10-2018 IPR029066 PLP-binding barrel DA442_22730 9f81bf867caec0cf83be9f17197478d1 400 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 34 282 5.9E-31 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 DA442_01060 69849ac525820121ac844ea0f429fa80 262 Gene3D G3DSA:3.90.550.10 1 238 1.2E-45 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DA442_01060 69849ac525820121ac844ea0f429fa80 262 Pfam PF02709 N-terminal domain of galactosyltransferase 166 226 4.1E-15 T 14-10-2018 IPR027791 Galactosyltransferase, C-terminal Reactome: R-HSA-2022854|Reactome: R-HSA-975577 DA442_01060 69849ac525820121ac844ea0f429fa80 262 SUPERFAMILY SSF53448 1 256 1.31E-40 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DA442_01060 69849ac525820121ac844ea0f429fa80 262 Pfam PF00535 Glycosyl transferase family 2 5 110 1.2E-19 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DA442_17515 93447e72d161c5f5e34985d9c7059da8 631 Pfam PF13932 GidA associated domain 403 616 2.8E-76 T 14-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 DA442_17515 93447e72d161c5f5e34985d9c7059da8 631 Gene3D G3DSA:1.10.10.1800 459 550 1.9E-32 T 14-10-2018 DA442_17515 93447e72d161c5f5e34985d9c7059da8 631 SMART SM01228 546 617 2.5E-42 T 14-10-2018 DA442_17515 93447e72d161c5f5e34985d9c7059da8 631 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 2.0E-294 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 DA442_17515 93447e72d161c5f5e34985d9c7059da8 631 Gene3D G3DSA:1.10.150.570 569 622 5.2E-23 T 14-10-2018 DA442_17515 93447e72d161c5f5e34985d9c7059da8 631 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 DA442_17515 93447e72d161c5f5e34985d9c7059da8 631 Gene3D G3DSA:3.50.50.60 1 232 4.5E-91 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_17515 93447e72d161c5f5e34985d9c7059da8 631 Gene3D G3DSA:3.50.50.60 296 458 1.7E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_17515 93447e72d161c5f5e34985d9c7059da8 631 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 DA442_17515 93447e72d161c5f5e34985d9c7059da8 631 SUPERFAMILY SSF51905 6 261 4.33E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_17515 93447e72d161c5f5e34985d9c7059da8 631 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.732 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 DA442_17515 93447e72d161c5f5e34985d9c7059da8 631 Pfam PF01134 Glucose inhibited division protein A 8 399 4.5E-170 T 14-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 DA442_03505 350d914ac001488152d8411f74f699e9 155 Pfam PF01029 NusB family 11 149 1.8E-35 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 DA442_03505 350d914ac001488152d8411f74f699e9 155 SUPERFAMILY SSF48013 7 153 3.79E-39 T 14-10-2018 IPR035926 NusB-like superfamily DA442_03505 350d914ac001488152d8411f74f699e9 155 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 10 150 5.4E-43 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 DA442_03505 350d914ac001488152d8411f74f699e9 155 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 8 153 23.117 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 DA442_03505 350d914ac001488152d8411f74f699e9 155 Gene3D G3DSA:1.10.940.10 3 155 6.1E-48 T 14-10-2018 IPR035926 NusB-like superfamily DA442_03160 d2aa63063b5782bf39ea440de2f61b8b 422 SUPERFAMILY SSF52954 327 421 1.54E-26 T 14-10-2018 DA442_03160 d2aa63063b5782bf39ea440de2f61b8b 422 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 420 33.784 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 DA442_03160 d2aa63063b5782bf39ea440de2f61b8b 422 Gene3D G3DSA:3.40.50.800 326 421 4.2E-25 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily DA442_03160 d2aa63063b5782bf39ea440de2f61b8b 422 Pfam PF03129 Anticodon binding domain 329 420 7.2E-11 T 14-10-2018 IPR004154 Anticodon-binding DA442_03160 d2aa63063b5782bf39ea440de2f61b8b 422 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 409 1.2E-158 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 DA442_03160 d2aa63063b5782bf39ea440de2f61b8b 422 Gene3D G3DSA:3.30.930.10 2 323 1.9E-120 T 14-10-2018 DA442_03160 d2aa63063b5782bf39ea440de2f61b8b 422 Pfam PF13393 Histidyl-tRNA synthetase 10 312 1.2E-45 T 14-10-2018 DA442_03160 d2aa63063b5782bf39ea440de2f61b8b 422 SUPERFAMILY SSF55681 5 320 3.19E-104 T 14-10-2018 DA442_03160 d2aa63063b5782bf39ea440de2f61b8b 422 PIRSF PIRSF001549 2 422 1.6E-125 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 DA442_21290 2cc989b65b315196cadb95c2604d2594 282 Gene3D G3DSA:3.40.1090.10 2 87 3.2E-8 T 14-10-2018 DA442_21290 2cc989b65b315196cadb95c2604d2594 282 Gene3D G3DSA:3.40.1090.10 88 233 2.2E-11 T 14-10-2018 DA442_21290 2cc989b65b315196cadb95c2604d2594 282 SUPERFAMILY SSF52151 6 279 3.66E-35 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DA442_21290 2cc989b65b315196cadb95c2604d2594 282 Pfam PF01734 Patatin-like phospholipase 9 175 6.2E-17 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 DA442_25115 45b1132f1cb0197b4cc7bbe21f4bd69c 204 PIRSF PIRSF006324 1 204 1.9E-48 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DA442_25115 45b1132f1cb0197b4cc7bbe21f4bd69c 204 Pfam PF01810 LysE type translocator 15 202 2.3E-23 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DA442_10760 d364228ba212c6601cc4de9ba043b7e2 428 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 423 5.0E-100 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DA442_10760 d364228ba212c6601cc4de9ba043b7e2 428 PIRSF PIRSF006066 1 427 1.2E-74 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DA442_10760 d364228ba212c6601cc4de9ba043b7e2 428 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 424 8.4E-106 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DA442_22960 6fb69fd40f6baf20985c0f321aea006a 470 SUPERFAMILY SSF51556 2 466 8.84E-183 T 14-10-2018 IPR032466 Metal-dependent hydrolase DA442_22960 6fb69fd40f6baf20985c0f321aea006a 470 Hamap MF_00675 Uronate isomerase [uxaC]. 2 468 50.074 T 14-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 DA442_22960 6fb69fd40f6baf20985c0f321aea006a 470 Gene3D G3DSA:1.10.2020.10 46 137 1.1E-201 T 14-10-2018 DA442_22960 6fb69fd40f6baf20985c0f321aea006a 470 Pfam PF02614 Glucuronate isomerase 1 466 5.3E-229 T 14-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 DA442_22960 6fb69fd40f6baf20985c0f321aea006a 470 Gene3D G3DSA:3.20.20.140 7 466 1.1E-201 T 14-10-2018 DA442_24410 fe0b2c0cb8fc99d5367a3ba005a6e971 136 SUPERFAMILY SSF55729 7 121 4.22E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_24410 fe0b2c0cb8fc99d5367a3ba005a6e971 136 Pfam PF13673 Acetyltransferase (GNAT) domain 33 133 4.7E-15 T 14-10-2018 IPR000182 GNAT domain DA442_24410 fe0b2c0cb8fc99d5367a3ba005a6e971 136 Gene3D G3DSA:3.40.630.30 1 134 1.5E-32 T 14-10-2018 DA442_05910 cf9e6df6dddbd8279549d4d990226ec2 460 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 460 39.294 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 DA442_05910 cf9e6df6dddbd8279549d4d990226ec2 460 SUPERFAMILY SSF47323 316 459 2.09E-40 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DA442_05910 cf9e6df6dddbd8279549d4d990226ec2 460 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 7.5E-141 T 14-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 DA442_05910 cf9e6df6dddbd8279549d4d990226ec2 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 3.6E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 DA442_05910 cf9e6df6dddbd8279549d4d990226ec2 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 3.6E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 DA442_05910 cf9e6df6dddbd8279549d4d990226ec2 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 3.6E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 DA442_05910 cf9e6df6dddbd8279549d4d990226ec2 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 3.6E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 DA442_05910 cf9e6df6dddbd8279549d4d990226ec2 460 SUPERFAMILY SSF52374 1 313 2.25E-103 T 14-10-2018 DA442_05910 cf9e6df6dddbd8279549d4d990226ec2 460 Gene3D G3DSA:3.40.50.620 1 305 1.3E-137 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DA442_05910 cf9e6df6dddbd8279549d4d990226ec2 460 SMART SM00840 341 402 1.4E-28 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 DA442_05910 cf9e6df6dddbd8279549d4d990226ec2 460 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 459 2.5E-191 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 DA442_05910 cf9e6df6dddbd8279549d4d990226ec2 460 Pfam PF09190 DALR domain 341 402 6.6E-25 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 DA442_05910 cf9e6df6dddbd8279549d4d990226ec2 460 Gene3D G3DSA:1.20.120.640 306 460 6.6E-51 T 14-10-2018 DA442_03755 bcea0f56ee7ebcdeeb20919e8ba29373 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 8.1E-201 T 14-10-2018 DA442_03755 bcea0f56ee7ebcdeeb20919e8ba29373 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 73.25 T 14-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 DA442_03755 bcea0f56ee7ebcdeeb20919e8ba29373 474 Pfam PF04055 Radical SAM superfamily 151 325 1.2E-27 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DA442_03755 bcea0f56ee7ebcdeeb20919e8ba29373 474 Pfam PF01938 TRAM domain 379 440 3.6E-18 T 14-10-2018 IPR002792 TRAM domain DA442_03755 bcea0f56ee7ebcdeeb20919e8ba29373 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 6.3E-154 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 DA442_03755 bcea0f56ee7ebcdeeb20919e8ba29373 474 Gene3D G3DSA:3.80.30.20 145 377 5.2E-84 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe DA442_03755 bcea0f56ee7ebcdeeb20919e8ba29373 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 6.8E-30 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 DA442_03755 bcea0f56ee7ebcdeeb20919e8ba29373 474 SMART SM00729 147 367 3.0E-63 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DA442_03755 bcea0f56ee7ebcdeeb20919e8ba29373 474 SUPERFAMILY SSF102114 122 374 1.03E-61 T 14-10-2018 DA442_03755 bcea0f56ee7ebcdeeb20919e8ba29373 474 Gene3D G3DSA:3.40.50.12160 3 138 1.9E-34 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily DA442_03755 bcea0f56ee7ebcdeeb20919e8ba29373 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 DA442_02490 dac78792a67580187e3149bb0557c760 319 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 298 5.5E-135 T 14-10-2018 IPR005911 Protein YhcC-like GO:0051536 DA442_02490 dac78792a67580187e3149bb0557c760 319 SUPERFAMILY SSF102114 13 268 9.81E-51 T 14-10-2018 DA442_02490 dac78792a67580187e3149bb0557c760 319 SMART SM00729 23 247 8.7E-48 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DA442_02490 dac78792a67580187e3149bb0557c760 319 Gene3D G3DSA:3.80.30.20 42 275 3.9E-18 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe DA442_02490 dac78792a67580187e3149bb0557c760 319 Pfam PF16199 Radical_SAM C-terminal domain 209 279 3.1E-17 T 14-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 DA442_02490 dac78792a67580187e3149bb0557c760 319 Pfam PF04055 Radical SAM superfamily 43 202 1.3E-18 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DA442_13335 48e54ccb3c849bd554a11b3b5bb03630 251 Pfam PF08666 SAF domain 45 105 4.6E-9 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 DA442_13335 48e54ccb3c849bd554a11b3b5bb03630 251 SMART SM00858 44 106 1.1E-8 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 DA442_13335 48e54ccb3c849bd554a11b3b5bb03630 251 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 7 245 1.3E-73 T 14-10-2018 IPR017592 Pilus assembly, Flp-type CpaB DA442_13335 48e54ccb3c849bd554a11b3b5bb03630 251 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 113 216 6.3E-30 T 14-10-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain DA442_25230 b5e3f31d47b7b0ee970e7aacf67b2098 289 Pfam PF06445 GyrI-like small molecule binding domain 138 286 6.1E-28 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain DA442_25230 b5e3f31d47b7b0ee970e7aacf67b2098 289 SUPERFAMILY SSF55136 138 286 5.76E-26 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily DA442_25230 b5e3f31d47b7b0ee970e7aacf67b2098 289 SMART SM00342 23 107 7.8E-31 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_25230 b5e3f31d47b7b0ee970e7aacf67b2098 289 SUPERFAMILY SSF46689 60 110 1.88E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_25230 b5e3f31d47b7b0ee970e7aacf67b2098 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 76 91 5.7E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DA442_25230 b5e3f31d47b7b0ee970e7aacf67b2098 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 91 107 5.7E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DA442_25230 b5e3f31d47b7b0ee970e7aacf67b2098 289 SMART SM00871 137 287 4.1E-18 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding DA442_25230 b5e3f31d47b7b0ee970e7aacf67b2098 289 Gene3D G3DSA:3.20.80.10 138 287 3.7E-27 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily DA442_25230 b5e3f31d47b7b0ee970e7aacf67b2098 289 Gene3D G3DSA:1.10.10.60 57 112 4.7E-17 T 14-10-2018 DA442_25230 b5e3f31d47b7b0ee970e7aacf67b2098 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 60 103 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DA442_25230 b5e3f31d47b7b0ee970e7aacf67b2098 289 Gene3D G3DSA:1.10.10.60 1 56 3.5E-16 T 14-10-2018 DA442_25230 b5e3f31d47b7b0ee970e7aacf67b2098 289 Pfam PF12833 Helix-turn-helix domain 29 108 9.9E-26 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_25230 b5e3f31d47b7b0ee970e7aacf67b2098 289 SUPERFAMILY SSF46689 7 57 2.64E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_04780 8e70f8576bd2f0baa6b707c4b8af3663 600 Gene3D G3DSA:3.30.565.10 441 599 1.6E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_04780 8e70f8576bd2f0baa6b707c4b8af3663 600 SMART SM00388 372 440 5.8E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_04780 8e70f8576bd2f0baa6b707c4b8af3663 600 Gene3D G3DSA:3.30.450.20 41 279 8.4E-82 T 14-10-2018 DA442_04780 8e70f8576bd2f0baa6b707c4b8af3663 600 Pfam PF00512 His Kinase A (phospho-acceptor) domain 373 439 1.0E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_04780 8e70f8576bd2f0baa6b707c4b8af3663 600 SUPERFAMILY SSF55874 440 592 2.49E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_04780 8e70f8576bd2f0baa6b707c4b8af3663 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 542 552 3.1E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_04780 8e70f8576bd2f0baa6b707c4b8af3663 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 577 590 3.1E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_04780 8e70f8576bd2f0baa6b707c4b8af3663 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 524 538 3.1E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_04780 8e70f8576bd2f0baa6b707c4b8af3663 600 PRINTS PR00344 Bacterial sensor protein C-terminal signature 553 571 3.1E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_04780 8e70f8576bd2f0baa6b707c4b8af3663 600 PIRSF PIRSF036431 1 599 3.2E-191 T 14-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) DA442_04780 8e70f8576bd2f0baa6b707c4b8af3663 600 Gene3D G3DSA:1.10.287.130 348 435 2.5E-19 T 14-10-2018 DA442_04780 8e70f8576bd2f0baa6b707c4b8af3663 600 SMART SM00387 483 593 3.3E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_04780 8e70f8576bd2f0baa6b707c4b8af3663 600 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 486 590 2.9E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_04780 8e70f8576bd2f0baa6b707c4b8af3663 600 SUPERFAMILY SSF103190 48 187 7.85E-29 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily DA442_04780 8e70f8576bd2f0baa6b707c4b8af3663 600 Gene3D G3DSA:3.30.450.20 54 175 8.4E-82 T 14-10-2018 DA442_04780 8e70f8576bd2f0baa6b707c4b8af3663 600 SUPERFAMILY SSF47384 367 440 2.75E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DA442_04780 8e70f8576bd2f0baa6b707c4b8af3663 600 Pfam PF02743 Cache domain 37 217 1.5E-12 T 14-10-2018 IPR033479 Double Cache domain 1 DA442_25035 221d4420279bf71c6ef45a90af0dbd42 500 Gene3D G3DSA:1.20.1600.10 53 486 9.1E-108 T 14-10-2018 DA442_25035 221d4420279bf71c6ef45a90af0dbd42 500 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 10 484 4.5E-78 T 14-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 DA442_25035 221d4420279bf71c6ef45a90af0dbd42 500 Gene3D G3DSA:2.20.200.10 99 374 9.1E-108 T 14-10-2018 DA442_25035 221d4420279bf71c6ef45a90af0dbd42 500 SUPERFAMILY SSF56954 3 487 4.19E-88 T 14-10-2018 DA442_25035 221d4420279bf71c6ef45a90af0dbd42 500 Pfam PF02321 Outer membrane efflux protein 62 273 1.9E-15 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DA442_25035 221d4420279bf71c6ef45a90af0dbd42 500 Pfam PF02321 Outer membrane efflux protein 304 483 9.6E-22 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DA442_05960 9f657ac1a0e1a4621841f78ed9ef2748 59 Pfam PF06796 Periplasmic nitrate reductase protein NapE 5 55 3.4E-24 T 14-10-2018 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE DA442_05960 9f657ac1a0e1a4621841f78ed9ef2748 59 TIGRFAM TIGR02972 TMAO_torE: trimethylamine N-oxide reductase system, TorE protein 8 57 5.6E-28 T 14-10-2018 IPR014316 Trimethylamine N-oxide reductase system, TorE DA442_00425 0e78391749d4f3144fd1c442b07fca50 183 Pfam PF04972 BON domain 33 99 1.8E-17 T 14-10-2018 IPR007055 BON domain DA442_00425 0e78391749d4f3144fd1c442b07fca50 183 Pfam PF04972 BON domain 115 182 2.1E-16 T 14-10-2018 IPR007055 BON domain DA442_00425 0e78391749d4f3144fd1c442b07fca50 183 SMART SM00749 120 183 3.9E-4 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria DA442_00425 0e78391749d4f3144fd1c442b07fca50 183 SMART SM00749 37 100 67.0 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria DA442_19585 06b9f13eb4dfd429b975e82343f1646d 139 Pfam PF04143 Sulphur transport 5 126 4.0E-10 T 14-10-2018 IPR007272 Sulphur transport domain DA442_22530 7ecf8f9172985082f2e5c32cfc88cf66 902 SUPERFAMILY SSF48452 442 805 1.9E-156 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_22530 7ecf8f9172985082f2e5c32cfc88cf66 902 Hamap MF_01247 HTH-type transcriptional regulator MalT [malT]. 1 902 38.754 T 14-10-2018 IPR023768 Transcriptional regulator HTH-type, MalT DA442_22530 7ecf8f9172985082f2e5c32cfc88cf66 902 ProSitePatterns PS00622 LuxR-type HTH domain signature. 853 880 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_22530 7ecf8f9172985082f2e5c32cfc88cf66 902 SUPERFAMILY SSF46894 831 894 9.52E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DA442_22530 7ecf8f9172985082f2e5c32cfc88cf66 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 869 881 1.3E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_22530 7ecf8f9172985082f2e5c32cfc88cf66 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 853 869 1.3E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_22530 7ecf8f9172985082f2e5c32cfc88cf66 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 839 853 1.3E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_22530 7ecf8f9172985082f2e5c32cfc88cf66 902 Gene3D G3DSA:1.25.40.10 445 811 3.6E-83 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_22530 7ecf8f9172985082f2e5c32cfc88cf66 902 Gene3D G3DSA:1.10.10.10 829 900 8.3E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_22530 7ecf8f9172985082f2e5c32cfc88cf66 902 Gene3D G3DSA:3.40.50.300 12 165 4.6E-7 T 14-10-2018 DA442_22530 7ecf8f9172985082f2e5c32cfc88cf66 902 SMART SM00421 836 893 5.8E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_22530 7ecf8f9172985082f2e5c32cfc88cf66 902 SUPERFAMILY SSF52540 14 230 2.93E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_22530 7ecf8f9172985082f2e5c32cfc88cf66 902 Pfam PF00196 Bacterial regulatory proteins, luxR family 838 893 1.3E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_00790 760ad6ea0e7f7e22e908885f9d16627e 163 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 DA442_00790 760ad6ea0e7f7e22e908885f9d16627e 163 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 6.7E-23 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 DA442_00790 760ad6ea0e7f7e22e908885f9d16627e 163 Gene3D G3DSA:1.10.287.180 1 76 7.5E-28 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 DA442_00790 760ad6ea0e7f7e22e908885f9d16627e 163 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 2 158 1.6E-71 T 14-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 DA442_00790 760ad6ea0e7f7e22e908885f9d16627e 163 SUPERFAMILY SSF46557 3 78 1.44E-25 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 DA442_00790 760ad6ea0e7f7e22e908885f9d16627e 163 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 156 1.0E-22 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 DA442_00790 760ad6ea0e7f7e22e908885f9d16627e 163 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 157 49.637 T 14-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 DA442_00790 760ad6ea0e7f7e22e908885f9d16627e 163 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 DA442_00790 760ad6ea0e7f7e22e908885f9d16627e 163 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 26.016 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 DA442_00790 760ad6ea0e7f7e22e908885f9d16627e 163 Gene3D G3DSA:3.10.50.30 77 159 1.2E-30 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 DA442_00790 760ad6ea0e7f7e22e908885f9d16627e 163 PIRSF PIRSF006092 2 158 1.0E-43 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 DA442_00790 760ad6ea0e7f7e22e908885f9d16627e 163 SUPERFAMILY SSF54534 80 156 1.02E-18 T 14-10-2018 DA442_11875 1fe6a0b7d2c29aff0494afd9feef40a3 371 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 119 7.9E-22 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DA442_11875 1fe6a0b7d2c29aff0494afd9feef40a3 371 SUPERFAMILY SSF51735 1 146 1.71E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_11875 1fe6a0b7d2c29aff0494afd9feef40a3 371 SUPERFAMILY SSF55347 133 354 1.18E-78 T 14-10-2018 DA442_11875 1fe6a0b7d2c29aff0494afd9feef40a3 371 Gene3D G3DSA:3.40.50.720 3 356 5.7E-147 T 14-10-2018 DA442_11875 1fe6a0b7d2c29aff0494afd9feef40a3 371 SMART SM00859 2 121 3.8E-21 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DA442_11875 1fe6a0b7d2c29aff0494afd9feef40a3 371 Gene3D G3DSA:3.30.360.10 134 350 5.7E-147 T 14-10-2018 DA442_11875 1fe6a0b7d2c29aff0494afd9feef40a3 371 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 1 366 5.5E-189 T 14-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DA442_11875 1fe6a0b7d2c29aff0494afd9feef40a3 371 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 261 275 - T 14-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DA442_11875 1fe6a0b7d2c29aff0494afd9feef40a3 371 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 367 31.897 T 14-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DA442_11875 1fe6a0b7d2c29aff0494afd9feef40a3 371 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 143 353 1.4E-57 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DA442_11875 1fe6a0b7d2c29aff0494afd9feef40a3 371 PIRSF PIRSF000148 1 371 3.6E-65 T 14-10-2018 DA442_01460 abc0a95d3b1f5f1fd7223b93a4e566e9 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 37.508 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01460 abc0a95d3b1f5f1fd7223b93a4e566e9 136 Gene3D G3DSA:3.90.1170.10 1 136 4.7E-54 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 DA442_01460 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 3.4E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01460 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 3.4E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01460 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 3.4E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01460 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 3.4E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01460 abc0a95d3b1f5f1fd7223b93a4e566e9 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_01460 abc0a95d3b1f5f1fd7223b93a4e566e9 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 125 4.7E-57 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01460 abc0a95d3b1f5f1fd7223b93a4e566e9 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 8.8E-47 T 14-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 DA442_01460 abc0a95d3b1f5f1fd7223b93a4e566e9 136 SUPERFAMILY SSF54686 3 133 4.19E-53 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 DA442_10620 5467c0337b26c44c4c60e1d1b834efd1 505 PIRSF PIRSF001394 1 505 1.2E-217 T 14-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 DA442_10620 5467c0337b26c44c4c60e1d1b834efd1 505 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 325 487 1.8E-51 T 14-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 DA442_10620 5467c0337b26c44c4c60e1d1b834efd1 505 SUPERFAMILY SSF117457 317 489 4.84E-64 T 14-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 DA442_10620 5467c0337b26c44c4c60e1d1b834efd1 505 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 3.4E-98 T 14-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 DA442_10620 5467c0337b26c44c4c60e1d1b834efd1 505 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 284 3.8E-63 T 14-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 DA442_10620 5467c0337b26c44c4c60e1d1b834efd1 505 Pfam PF05683 Fumarase C-terminus 289 490 3.5E-84 T 14-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 DA442_10620 5467c0337b26c44c4c60e1d1b834efd1 505 Gene3D G3DSA:3.20.130.10 305 490 1.3E-62 T 14-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 DA442_14555 e8077be8ba0fc23acd9999b8fbe9c66a 299 SUPERFAMILY SSF51306 78 298 5.23E-70 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily DA442_14555 e8077be8ba0fc23acd9999b8fbe9c66a 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 144 156 4.4E-26 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DA442_14555 e8077be8ba0fc23acd9999b8fbe9c66a 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 80 96 4.4E-26 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DA442_14555 e8077be8ba0fc23acd9999b8fbe9c66a 299 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 232 251 4.4E-26 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DA442_14555 e8077be8ba0fc23acd9999b8fbe9c66a 299 Pfam PF00717 Peptidase S24-like 86 161 1.6E-21 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C DA442_14555 e8077be8ba0fc23acd9999b8fbe9c66a 299 Gene3D G3DSA:2.10.109.10 78 272 2.7E-74 T 14-10-2018 DA442_14555 e8077be8ba0fc23acd9999b8fbe9c66a 299 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 66 272 9.1E-48 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DA442_14555 e8077be8ba0fc23acd9999b8fbe9c66a 299 ProSitePatterns PS00760 Signal peptidases I lysine active site. 146 158 - T 14-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 DA442_14555 e8077be8ba0fc23acd9999b8fbe9c66a 299 Pfam PF10502 Signal peptidase, peptidase S26 220 269 9.9E-8 T 14-10-2018 IPR019533 Peptidase S26 DA442_14555 e8077be8ba0fc23acd9999b8fbe9c66a 299 ProSitePatterns PS00501 Signal peptidases I serine active site. 89 96 - T 14-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 DA442_14555 e8077be8ba0fc23acd9999b8fbe9c66a 299 ProSitePatterns PS00761 Signal peptidases I signature 3. 237 250 - T 14-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 DA442_14555 e8077be8ba0fc23acd9999b8fbe9c66a 299 Gene3D G3DSA:2.170.230.10 155 231 2.7E-74 T 14-10-2018 DA442_20905 1cb7bd39d2e44206170dd668e850d1e2 115 PIRSF PIRSF028226 1 115 2.1E-57 T 14-10-2018 IPR014176 Phasin, subfamily 3 DA442_20905 1cb7bd39d2e44206170dd668e850d1e2 115 TIGRFAM TIGR02809 phasin_3: phasin family protein 4 113 1.2E-55 T 14-10-2018 IPR014176 Phasin, subfamily 3 DA442_20905 1cb7bd39d2e44206170dd668e850d1e2 115 Pfam PF09361 Phasin protein 8 108 9.8E-21 T 14-10-2018 IPR018968 Phasin DA442_14065 257f8f02289341bc291c0cbf4e751e11 802 SUPERFAMILY SSF48208 274 801 2.21E-110 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 DA442_14065 257f8f02289341bc291c0cbf4e751e11 802 Pfam PF06165 Glycosyltransferase family 36 21 267 1.8E-84 T 14-10-2018 IPR010383 Glycosyl hydrolase 94 DA442_14065 257f8f02289341bc291c0cbf4e751e11 802 SUPERFAMILY SSF74650 1 269 2.01E-82 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 DA442_14065 257f8f02289341bc291c0cbf4e751e11 802 Gene3D G3DSA:2.70.98.40 1 302 3.0E-116 T 14-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily DA442_14065 257f8f02289341bc291c0cbf4e751e11 802 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 296 728 5.7E-210 T 14-10-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain DA442_14065 257f8f02289341bc291c0cbf4e751e11 802 SMART SM01068 1 63 2.3E-20 T 14-10-2018 IPR009342 Putative carbohydrate binding domain DA442_14065 257f8f02289341bc291c0cbf4e751e11 802 Gene3D G3DSA:1.50.10.10 311 720 2.1E-135 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 DA442_14065 257f8f02289341bc291c0cbf4e751e11 802 Gene3D G3DSA:2.60.420.10 721 801 4.4E-29 T 14-10-2018 DA442_07905 a9acb6f40935736648da77a2c0e6a96f 356 Gene3D G3DSA:3.40.50.2000 16 185 1.1E-15 T 14-10-2018 DA442_07905 a9acb6f40935736648da77a2c0e6a96f 356 Gene3D G3DSA:3.40.50.2000 186 337 1.6E-31 T 14-10-2018 DA442_07905 a9acb6f40935736648da77a2c0e6a96f 356 Pfam PF13439 Glycosyltransferase Family 4 25 168 3.5E-15 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DA442_07905 a9acb6f40935736648da77a2c0e6a96f 356 SUPERFAMILY SSF53756 19 350 1.3E-55 T 14-10-2018 DA442_07905 a9acb6f40935736648da77a2c0e6a96f 356 Pfam PF00534 Glycosyl transferases group 1 191 331 2.1E-23 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 DA442_10810 35b5aca4c9482c5d73c37bfd91a97f90 475 SUPERFAMILY SSF46626 334 475 2.44E-24 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_10810 35b5aca4c9482c5d73c37bfd91a97f90 475 Gene3D G3DSA:1.10.760.10 330 475 1.0E-9 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_10810 35b5aca4c9482c5d73c37bfd91a97f90 475 PIRSF PIRSF028099 7 475 3.1E-184 T 14-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase DA442_10810 35b5aca4c9482c5d73c37bfd91a97f90 475 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 37 475 1.9E-141 T 14-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase DA442_01940 4f76daacb533439db1b80e2f1901d211 230 Gene3D G3DSA:3.40.50.2300 1 121 2.3E-37 T 14-10-2018 DA442_01940 4f76daacb533439db1b80e2f1901d211 230 SMART SM00862 149 224 8.5E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DA442_01940 4f76daacb533439db1b80e2f1901d211 230 Gene3D G3DSA:1.10.10.10 127 230 9.1E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_01940 4f76daacb533439db1b80e2f1901d211 230 SUPERFAMILY SSF52172 2 117 8.11E-38 T 14-10-2018 IPR011006 CheY-like superfamily DA442_01940 4f76daacb533439db1b80e2f1901d211 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 224 8.8E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DA442_01940 4f76daacb533439db1b80e2f1901d211 230 Pfam PF00072 Response regulator receiver domain 3 113 2.3E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_01940 4f76daacb533439db1b80e2f1901d211 230 SMART SM00448 1 112 3.4E-40 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_01940 4f76daacb533439db1b80e2f1901d211 230 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 224 1.5E-99 T 14-10-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 DA442_01940 4f76daacb533439db1b80e2f1901d211 230 SUPERFAMILY SSF46894 127 225 3.97E-29 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DA442_02860 6e3345ae66870923d83a04c62186ec8f 325 Pfam PF00849 RNA pseudouridylate synthase 92 241 9.7E-30 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_02860 6e3345ae66870923d83a04c62186ec8f 325 Pfam PF01479 S4 domain 18 65 1.3E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_02860 6e3345ae66870923d83a04c62186ec8f 325 SMART SM00363 18 83 2.8E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_02860 6e3345ae66870923d83a04c62186ec8f 325 Gene3D G3DSA:3.10.290.10 2 76 2.9E-24 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DA442_02860 6e3345ae66870923d83a04c62186ec8f 325 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 15 313 5.4E-105 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_02860 6e3345ae66870923d83a04c62186ec8f 325 SUPERFAMILY SSF55120 77 317 6.58E-80 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_02860 6e3345ae66870923d83a04c62186ec8f 325 Gene3D G3DSA:3.30.2350.10 85 316 9.8E-73 T 14-10-2018 DA442_02860 6e3345ae66870923d83a04c62186ec8f 325 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_02860 6e3345ae66870923d83a04c62186ec8f 325 SUPERFAMILY SSF55174 17 68 1.85E-11 T 14-10-2018 DA442_07760 3f8ec7b5ac0d8d6963d1c8a9d707bbf3 647 Pfam PF00012 Hsp70 protein 21 345 1.7E-15 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DA442_07760 3f8ec7b5ac0d8d6963d1c8a9d707bbf3 647 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 231 244 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DA442_07760 3f8ec7b5ac0d8d6963d1c8a9d707bbf3 647 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 23 30 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DA442_07760 3f8ec7b5ac0d8d6963d1c8a9d707bbf3 647 Gene3D G3DSA:3.30.420.40 21 218 3.8E-35 T 14-10-2018 DA442_07760 3f8ec7b5ac0d8d6963d1c8a9d707bbf3 647 SUPERFAMILY SSF53067 226 488 2.18E-26 T 14-10-2018 DA442_07760 3f8ec7b5ac0d8d6963d1c8a9d707bbf3 647 PRINTS PR00301 70kDa heat shock protein signature 170 190 5.0E-7 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DA442_07760 3f8ec7b5ac0d8d6963d1c8a9d707bbf3 647 PRINTS PR00301 70kDa heat shock protein signature 19 32 5.0E-7 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DA442_07760 3f8ec7b5ac0d8d6963d1c8a9d707bbf3 647 PRINTS PR00301 70kDa heat shock protein signature 237 247 5.0E-7 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DA442_07760 3f8ec7b5ac0d8d6963d1c8a9d707bbf3 647 Gene3D G3DSA:3.30.420.40 224 266 3.8E-35 T 14-10-2018 DA442_07760 3f8ec7b5ac0d8d6963d1c8a9d707bbf3 647 Gene3D G3DSA:3.90.640.10 267 346 3.8E-35 T 14-10-2018 DA442_07760 3f8ec7b5ac0d8d6963d1c8a9d707bbf3 647 SUPERFAMILY SSF53067 19 212 1.05E-26 T 14-10-2018 DA442_22405 6610df767058a0184069971c7a4598b5 487 Gene3D G3DSA:3.30.70.2150 209 316 4.8E-40 T 14-10-2018 DA442_22405 6610df767058a0184069971c7a4598b5 487 Hamap MF_01905 GlcNAc-binding protein A [gbpA]. 3 486 56.996 T 14-10-2018 IPR020879 N-acetylglucosamine-binding protein A GO:0008061 DA442_22405 6610df767058a0184069971c7a4598b5 487 SUPERFAMILY SSF81296 24 203 2.1E-56 T 14-10-2018 IPR014756 Immunoglobulin E-set DA442_22405 6610df767058a0184069971c7a4598b5 487 Gene3D G3DSA:2.60.40.2550 317 414 2.2E-38 T 14-10-2018 DA442_22405 6610df767058a0184069971c7a4598b5 487 Gene3D G3DSA:2.70.50.50 24 202 4.8E-82 T 14-10-2018 DA442_22405 6610df767058a0184069971c7a4598b5 487 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 24 199 6.5E-36 T 14-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal DA442_06500 8e016047ad19431bfdf668f825439073 222 Gene3D G3DSA:3.30.1330.60 80 222 2.7E-44 T 14-10-2018 IPR036737 OmpA-like domain superfamily DA442_06500 8e016047ad19431bfdf668f825439073 222 Pfam PF13488 Glycine zipper 38 86 6.1E-11 T 14-10-2018 IPR039567 Glycine zipper domain DA442_06500 8e016047ad19431bfdf668f825439073 222 Pfam PF00691 OmpA family 118 212 3.2E-23 T 14-10-2018 IPR006665 OmpA-like domain DA442_06500 8e016047ad19431bfdf668f825439073 222 SUPERFAMILY SSF103088 106 221 4.71E-37 T 14-10-2018 IPR036737 OmpA-like domain superfamily DA442_06500 8e016047ad19431bfdf668f825439073 222 PRINTS PR01021 OMPA domain signature 118 140 5.0E-12 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DA442_06500 8e016047ad19431bfdf668f825439073 222 PRINTS PR01021 OMPA domain signature 148 163 5.0E-12 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DA442_06500 8e016047ad19431bfdf668f825439073 222 PRINTS PR01021 OMPA domain signature 163 179 5.0E-12 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DA442_06500 8e016047ad19431bfdf668f825439073 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 201 221 8.9E-7 T 14-10-2018 DA442_06500 8e016047ad19431bfdf668f825439073 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 163 180 8.9E-7 T 14-10-2018 DA442_06500 8e016047ad19431bfdf668f825439073 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 181 200 8.9E-7 T 14-10-2018 DA442_15565 2de8e9f83ac6c38cd9cdc7d59a594d3c 150 Gene3D G3DSA:3.40.5.10 1 50 9.2E-24 T 14-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_15565 2de8e9f83ac6c38cd9cdc7d59a594d3c 150 SUPERFAMILY SSF55653 60 148 1.05E-25 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily DA442_15565 2de8e9f83ac6c38cd9cdc7d59a594d3c 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 1.7E-21 T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_15565 2de8e9f83ac6c38cd9cdc7d59a594d3c 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 148 1.0E-55 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_15565 2de8e9f83ac6c38cd9cdc7d59a594d3c 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_15565 2de8e9f83ac6c38cd9cdc7d59a594d3c 150 Gene3D G3DSA:3.10.430.100 61 149 2.9E-31 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily DA442_15565 2de8e9f83ac6c38cd9cdc7d59a594d3c 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 2.3E-25 T 14-10-2018 IPR020069 Ribosomal protein L9, C-terminal DA442_15565 2de8e9f83ac6c38cd9cdc7d59a594d3c 150 SUPERFAMILY SSF55658 1 57 2.27E-19 T 14-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal DA442_15565 2de8e9f83ac6c38cd9cdc7d59a594d3c 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 26.19 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_13225 3335292065a0745e8b5597c012cc3c4d 343 SUPERFAMILY SSF74650 6 341 4.46E-111 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 DA442_13225 3335292065a0745e8b5597c012cc3c4d 343 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 9 342 3.7E-151 T 14-10-2018 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 DA442_13225 3335292065a0745e8b5597c012cc3c4d 343 PIRSF PIRSF005096 2 343 1.4E-118 T 14-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 DA442_13225 3335292065a0745e8b5597c012cc3c4d 343 Gene3D G3DSA:2.70.98.10 3 342 1.6E-119 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 DA442_13225 3335292065a0745e8b5597c012cc3c4d 343 Pfam PF01263 Aldose 1-epimerase 14 340 1.7E-93 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 DA442_20635 ffd1ae8d20ed15d6932775364daa2c71 272 Pfam PF00005 ABC transporter 29 191 1.4E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_20635 ffd1ae8d20ed15d6932775364daa2c71 272 SMART SM00382 38 248 3.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_20635 ffd1ae8d20ed15d6932775364daa2c71 272 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 241 262 4.1E-8 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal DA442_20635 ffd1ae8d20ed15d6932775364daa2c71 272 Gene3D G3DSA:3.40.50.300 2 265 7.5E-62 T 14-10-2018 DA442_20635 ffd1ae8d20ed15d6932775364daa2c71 272 SUPERFAMILY SSF52540 12 262 3.94E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_22090 5d90c8d518173d299b5e2e97cd941f00 296 Gene3D G3DSA:3.40.190.10 102 291 4.3E-37 T 14-10-2018 DA442_22090 5d90c8d518173d299b5e2e97cd941f00 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.4E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_22090 5d90c8d518173d299b5e2e97cd941f00 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.4E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_22090 5d90c8d518173d299b5e2e97cd941f00 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.4E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_22090 5d90c8d518173d299b5e2e97cd941f00 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 1.0E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_22090 5d90c8d518173d299b5e2e97cd941f00 296 SUPERFAMILY SSF53850 90 296 3.44E-29 T 14-10-2018 DA442_22090 5d90c8d518173d299b5e2e97cd941f00 296 Pfam PF03466 LysR substrate binding domain 89 295 5.3E-28 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_22090 5d90c8d518173d299b5e2e97cd941f00 296 Gene3D G3DSA:3.40.190.10 163 264 4.3E-37 T 14-10-2018 DA442_22090 5d90c8d518173d299b5e2e97cd941f00 296 SUPERFAMILY SSF46785 6 113 2.45E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_22090 5d90c8d518173d299b5e2e97cd941f00 296 Gene3D G3DSA:1.10.10.10 5 89 3.8E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_15355 df799f31ed81d1cda03292baf25f45bb 669 SMART SM00267 216 386 5.3E-10 T 14-10-2018 IPR000160 GGDEF domain DA442_15355 df799f31ed81d1cda03292baf25f45bb 669 Pfam PF00990 Diguanylate cyclase, GGDEF domain 229 381 5.0E-20 T 14-10-2018 IPR000160 GGDEF domain DA442_15355 df799f31ed81d1cda03292baf25f45bb 669 SUPERFAMILY SSF55073 233 386 5.57E-19 T 14-10-2018 IPR029787 Nucleotide cyclase DA442_15355 df799f31ed81d1cda03292baf25f45bb 669 SMART SM00052 397 651 3.0E-18 T 14-10-2018 IPR001633 EAL domain DA442_15355 df799f31ed81d1cda03292baf25f45bb 669 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 226 382 4.4E-10 T 14-10-2018 IPR000160 GGDEF domain DA442_15355 df799f31ed81d1cda03292baf25f45bb 669 SUPERFAMILY SSF141868 406 638 4.97E-38 T 14-10-2018 IPR035919 EAL domain superfamily DA442_15355 df799f31ed81d1cda03292baf25f45bb 669 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 39 134 3.5E-28 T 14-10-2018 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 DA442_15355 df799f31ed81d1cda03292baf25f45bb 669 Gene3D G3DSA:3.20.20.450 397 641 5.2E-39 T 14-10-2018 IPR035919 EAL domain superfamily DA442_15355 df799f31ed81d1cda03292baf25f45bb 669 Pfam PF00563 EAL domain 406 637 1.3E-52 T 14-10-2018 IPR001633 EAL domain DA442_15355 df799f31ed81d1cda03292baf25f45bb 669 Gene3D G3DSA:3.30.70.270 211 387 5.0E-23 T 14-10-2018 DA442_00190 39441040cdb855ecc527bfbb764a6854 193 Gene3D G3DSA:1.10.357.10 1 193 1.7E-83 T 14-10-2018 DA442_00190 39441040cdb855ecc527bfbb764a6854 193 SUPERFAMILY SSF46689 6 83 4.49E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_00190 39441040cdb855ecc527bfbb764a6854 193 Pfam PF16295 Tetracycline repressor, C-terminal all-alpha domain 65 190 2.7E-7 T 14-10-2018 IPR032551 HTH-type transcriptional repressor, C-terminal DA442_00190 39441040cdb855ecc527bfbb764a6854 193 ProSitePatterns PS01081 TetR-type HTH domain signature. 25 56 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DA442_00190 39441040cdb855ecc527bfbb764a6854 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 2.2E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DA442_00190 39441040cdb855ecc527bfbb764a6854 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 2.2E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DA442_00190 39441040cdb855ecc527bfbb764a6854 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 8.8E-18 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DA442_20910 fbddfeee1ab82472fdc59d3652c8e08e 402 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 DA442_20910 fbddfeee1ab82472fdc59d3652c8e08e 402 SUPERFAMILY SSF53901 4 270 2.31E-85 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DA442_20910 fbddfeee1ab82472fdc59d3652c8e08e 402 Gene3D G3DSA:3.40.47.10 126 398 5.5E-151 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DA442_20910 fbddfeee1ab82472fdc59d3652c8e08e 402 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 DA442_20910 fbddfeee1ab82472fdc59d3652c8e08e 402 Pfam PF02803 Thiolase, C-terminal domain 270 399 8.8E-46 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 DA442_20910 fbddfeee1ab82472fdc59d3652c8e08e 402 SUPERFAMILY SSF53901 271 399 2.98E-39 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DA442_20910 fbddfeee1ab82472fdc59d3652c8e08e 402 PIRSF PIRSF000429 1 402 5.3E-133 T 14-10-2018 IPR002155 Thiolase GO:0016747 DA442_20910 fbddfeee1ab82472fdc59d3652c8e08e 402 Gene3D G3DSA:3.40.47.10 6 276 5.5E-151 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DA442_20910 fbddfeee1ab82472fdc59d3652c8e08e 402 Pfam PF00108 Thiolase, N-terminal domain 4 263 3.4E-99 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 DA442_20910 fbddfeee1ab82472fdc59d3652c8e08e 402 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 4.6E-150 T 14-10-2018 IPR002155 Thiolase GO:0016747 DA442_20910 fbddfeee1ab82472fdc59d3652c8e08e 402 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 DA442_02620 8ebcf93393b33600772720c5fba1d4e8 579 Pfam PF01368 DHH family 71 205 1.9E-9 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DA442_02620 8ebcf93393b33600772720c5fba1d4e8 579 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 20 575 3.5E-158 T 14-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 DA442_02620 8ebcf93393b33600772720c5fba1d4e8 579 Pfam PF02272 DHHA1 domain 319 451 1.1E-26 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 DA442_02620 8ebcf93393b33600772720c5fba1d4e8 579 Gene3D G3DSA:3.10.310.30 325 456 2.2E-30 T 14-10-2018 DA442_02620 8ebcf93393b33600772720c5fba1d4e8 579 Gene3D G3DSA:3.90.1640.30 45 323 1.4E-89 T 14-10-2018 DA442_02620 8ebcf93393b33600772720c5fba1d4e8 579 SUPERFAMILY SSF64182 45 464 4.84E-119 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily DA442_12705 19d3c8c111d66b05f58a553bc2c89930 281 Gene3D G3DSA:3.60.10.10 60 281 2.9E-19 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DA442_12705 19d3c8c111d66b05f58a553bc2c89930 281 SUPERFAMILY SSF56219 61 277 4.19E-23 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DA442_12705 19d3c8c111d66b05f58a553bc2c89930 281 Hamap MF_01119 UPF0294 protein YafD [yafD]. 1 278 58.805 T 14-10-2018 IPR022958 Uncharacterised protein family UPF0294 DA442_12705 19d3c8c111d66b05f58a553bc2c89930 281 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 66 270 1.3E-6 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase DA442_02610 84f95ea1efc29fdfe395d539f6ca0524 305 SUPERFAMILY SSF56349 113 303 2.12E-57 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DA442_02610 84f95ea1efc29fdfe395d539f6ca0524 305 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 11 305 60.765 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 DA442_02610 84f95ea1efc29fdfe395d539f6ca0524 305 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 16 305 2.7E-115 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 DA442_02610 84f95ea1efc29fdfe395d539f6ca0524 305 Gene3D G3DSA:1.10.150.130 10 105 4.6E-22 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal DA442_02610 84f95ea1efc29fdfe395d539f6ca0524 305 SUPERFAMILY SSF47823 11 107 8.63E-34 T 14-10-2018 DA442_02610 84f95ea1efc29fdfe395d539f6ca0524 305 Pfam PF00589 Phage integrase family 120 291 2.9E-53 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DA442_02610 84f95ea1efc29fdfe395d539f6ca0524 305 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 15 97 2.9E-19 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 DA442_02610 84f95ea1efc29fdfe395d539f6ca0524 305 Gene3D G3DSA:1.10.443.10 118 299 1.3E-73 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DA442_02610 84f95ea1efc29fdfe395d539f6ca0524 305 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 13 305 56.073 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD DA442_03665 66f042aa00b4d52c14ba96ad8bcbb4a1 416 Pfam PF00464 Serine hydroxymethyltransferase 8 385 2.0E-183 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 DA442_03665 66f042aa00b4d52c14ba96ad8bcbb4a1 416 PIRSF PIRSF000412 1 416 2.6E-169 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 DA442_03665 66f042aa00b4d52c14ba96ad8bcbb4a1 416 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 416 52.536 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 DA442_03665 66f042aa00b4d52c14ba96ad8bcbb4a1 416 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 DA442_03665 66f042aa00b4d52c14ba96ad8bcbb4a1 416 SUPERFAMILY SSF53383 6 415 3.85E-185 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_03665 66f042aa00b4d52c14ba96ad8bcbb4a1 416 Gene3D G3DSA:3.40.640.10 37 288 1.1E-187 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_03665 66f042aa00b4d52c14ba96ad8bcbb4a1 416 Gene3D G3DSA:3.90.1150.10 10 396 1.1E-187 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DA442_00990 7a2afd9b0ec68ac6bf714e32329129ae 213 Pfam PF00156 Phosphoribosyl transferase domain 43 161 1.0E-12 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DA442_00990 7a2afd9b0ec68ac6bf714e32329129ae 213 Gene3D G3DSA:3.40.50.2020 1 213 7.0E-80 T 14-10-2018 DA442_00990 7a2afd9b0ec68ac6bf714e32329129ae 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 35.971 T 14-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DA442_00990 7a2afd9b0ec68ac6bf714e32329129ae 213 SUPERFAMILY SSF53271 2 211 1.02E-49 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like DA442_00990 7a2afd9b0ec68ac6bf714e32329129ae 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 6.3E-69 T 14-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DA442_08935 c2dc2db712f99768e01659320846c191 228 PIRSF PIRSF006171 3 228 2.7E-79 T 14-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 DA442_08935 c2dc2db712f99768e01659320846c191 228 Pfam PF12431 Transcriptional regulator 134 162 3.2E-8 T 14-10-2018 IPR028141 Transcriptional regulator DA442_08935 c2dc2db712f99768e01659320846c191 228 Pfam PF00072 Response regulator receiver domain 7 118 9.5E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_08935 c2dc2db712f99768e01659320846c191 228 Gene3D G3DSA:3.40.50.2300 3 147 7.5E-27 T 14-10-2018 DA442_08935 c2dc2db712f99768e01659320846c191 228 SMART SM00448 5 118 6.7E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_08935 c2dc2db712f99768e01659320846c191 228 SUPERFAMILY SSF52172 6 129 3.7E-31 T 14-10-2018 IPR011006 CheY-like superfamily DA442_05665 b33fb0ec9a51ae39d74781188c76662a 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.8E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_05665 b33fb0ec9a51ae39d74781188c76662a 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.8E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_05665 b33fb0ec9a51ae39d74781188c76662a 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.8E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_05665 b33fb0ec9a51ae39d74781188c76662a 324 Gene3D G3DSA:1.10.10.10 1 86 5.4E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_05665 b33fb0ec9a51ae39d74781188c76662a 324 Gene3D G3DSA:3.40.190.10 93 303 7.4E-98 T 14-10-2018 DA442_05665 b33fb0ec9a51ae39d74781188c76662a 324 Gene3D G3DSA:3.40.190.10 167 267 7.4E-98 T 14-10-2018 DA442_05665 b33fb0ec9a51ae39d74781188c76662a 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 1.9E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_05665 b33fb0ec9a51ae39d74781188c76662a 324 SUPERFAMILY SSF46785 1 113 5.75E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_05665 b33fb0ec9a51ae39d74781188c76662a 324 Pfam PF03466 LysR substrate binding domain 91 292 4.3E-39 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_05665 b33fb0ec9a51ae39d74781188c76662a 324 SUPERFAMILY SSF53850 91 322 3.53E-42 T 14-10-2018 DA442_08405 e04b03962b2846d183cccb2f2886f9d9 598 Gene3D G3DSA:1.20.1560.10 2 345 5.6E-56 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DA442_08405 e04b03962b2846d183cccb2f2886f9d9 598 Pfam PF00664 ABC transporter transmembrane region 25 312 5.3E-30 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DA442_08405 e04b03962b2846d183cccb2f2886f9d9 598 SUPERFAMILY SSF52540 356 591 9.4E-80 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_08405 e04b03962b2846d183cccb2f2886f9d9 598 Pfam PF00005 ABC transporter 376 524 2.9E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_08405 e04b03962b2846d183cccb2f2886f9d9 598 SMART SM00382 385 572 3.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_08405 e04b03962b2846d183cccb2f2886f9d9 598 SUPERFAMILY SSF90123 12 343 1.7E-57 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DA442_08405 e04b03962b2846d183cccb2f2886f9d9 598 ProSitePatterns PS00211 ABC transporters family signature. 496 510 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_08405 e04b03962b2846d183cccb2f2886f9d9 598 Gene3D G3DSA:3.40.50.300 351 598 9.6E-81 T 14-10-2018 DA442_22910 dc1df0bf3724e718325c8ce8f56a5582 330 SMART SM00829 15 328 6.0E-7 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DA442_22910 dc1df0bf3724e718325c8ce8f56a5582 330 Pfam PF13602 Zinc-binding dehydrogenase 210 328 3.5E-6 T 14-10-2018 DA442_22910 dc1df0bf3724e718325c8ce8f56a5582 330 Gene3D G3DSA:3.90.180.10 14 313 1.9E-66 T 14-10-2018 DA442_22910 dc1df0bf3724e718325c8ce8f56a5582 330 SUPERFAMILY SSF51735 123 289 1.42E-23 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_22910 dc1df0bf3724e718325c8ce8f56a5582 330 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 34 98 1.1E-6 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DA442_22910 dc1df0bf3724e718325c8ce8f56a5582 330 SUPERFAMILY SSF50129 16 153 7.15E-25 T 14-10-2018 IPR011032 GroES-like superfamily DA442_22910 dc1df0bf3724e718325c8ce8f56a5582 330 Gene3D G3DSA:3.40.50.720 129 296 1.9E-66 T 14-10-2018 DA442_05450 f666418401e100f502d897e2f9b33c5d 289 Gene3D G3DSA:3.20.20.410 2 273 1.6E-46 T 14-10-2018 IPR036520 UPF0759 superfamily DA442_05450 f666418401e100f502d897e2f9b33c5d 289 Pfam PF01904 Protein of unknown function DUF72 24 262 1.1E-56 T 14-10-2018 IPR002763 Protein of unknown function DUF72 DA442_05450 f666418401e100f502d897e2f9b33c5d 289 SUPERFAMILY SSF117396 6 266 1.7E-72 T 14-10-2018 IPR036520 UPF0759 superfamily DA442_02215 189715dca42c275023db87ab3d6f0395 626 Pfam PF00204 DNA gyrase B 218 384 1.4E-42 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DA442_02215 189715dca42c275023db87ab3d6f0395 626 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 556 618 7.2E-27 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 DA442_02215 189715dca42c275023db87ab3d6f0395 626 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 2.5E-124 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DA442_02215 189715dca42c275023db87ab3d6f0395 626 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 2.5E-124 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DA442_02215 189715dca42c275023db87ab3d6f0395 626 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 2.5E-124 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DA442_02215 189715dca42c275023db87ab3d6f0395 626 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 2.5E-124 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DA442_02215 189715dca42c275023db87ab3d6f0395 626 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 2.5E-124 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DA442_02215 189715dca42c275023db87ab3d6f0395 626 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 2.5E-124 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DA442_02215 189715dca42c275023db87ab3d6f0395 626 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 2.5E-124 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DA442_02215 189715dca42c275023db87ab3d6f0395 626 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 2.5E-124 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DA442_02215 189715dca42c275023db87ab3d6f0395 626 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 2.5E-124 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DA442_02215 189715dca42c275023db87ab3d6f0395 626 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 2.5E-124 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DA442_02215 189715dca42c275023db87ab3d6f0395 626 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 2.5E-124 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DA442_02215 189715dca42c275023db87ab3d6f0395 626 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 2.5E-124 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DA442_02215 189715dca42c275023db87ab3d6f0395 626 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 2.5E-124 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DA442_02215 189715dca42c275023db87ab3d6f0395 626 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 2.5E-124 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DA442_02215 189715dca42c275023db87ab3d6f0395 626 SMART SM00387 27 173 3.6E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_02215 189715dca42c275023db87ab3d6f0395 626 SUPERFAMILY SSF55874 5 215 3.3E-66 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_02215 189715dca42c275023db87ab3d6f0395 626 SUPERFAMILY SSF56719 388 619 9.15E-80 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DA442_02215 189715dca42c275023db87ab3d6f0395 626 Gene3D G3DSA:3.30.565.10 2 215 1.9E-75 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_02215 189715dca42c275023db87ab3d6f0395 626 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 3 623 0.0 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DA442_02215 189715dca42c275023db87ab3d6f0395 626 SUPERFAMILY SSF54211 217 382 2.47E-47 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DA442_02215 189715dca42c275023db87ab3d6f0395 626 Pfam PF01751 Toprim domain 413 521 8.9E-12 T 14-10-2018 IPR006171 TOPRIM domain DA442_02215 189715dca42c275023db87ab3d6f0395 626 SMART SM00433 34 622 8.9E-217 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DA442_02215 189715dca42c275023db87ab3d6f0395 626 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 626 47.007 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DA442_02215 189715dca42c275023db87ab3d6f0395 626 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 171 1.3E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_02215 189715dca42c275023db87ab3d6f0395 626 Gene3D G3DSA:3.40.50.670 390 621 2.9E-93 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DA442_02215 189715dca42c275023db87ab3d6f0395 626 Gene3D G3DSA:3.30.230.10 216 389 7.1E-58 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DA442_02215 189715dca42c275023db87ab3d6f0395 626 PRINTS PR00418 DNA topoisomerase II family signature 109 123 5.8E-58 T 14-10-2018 DA442_02215 189715dca42c275023db87ab3d6f0395 626 PRINTS PR00418 DNA topoisomerase II family signature 414 428 5.8E-58 T 14-10-2018 DA442_02215 189715dca42c275023db87ab3d6f0395 626 PRINTS PR00418 DNA topoisomerase II family signature 497 514 5.8E-58 T 14-10-2018 DA442_02215 189715dca42c275023db87ab3d6f0395 626 PRINTS PR00418 DNA topoisomerase II family signature 31 46 5.8E-58 T 14-10-2018 DA442_02215 189715dca42c275023db87ab3d6f0395 626 PRINTS PR00418 DNA topoisomerase II family signature 479 495 5.8E-58 T 14-10-2018 DA442_02215 189715dca42c275023db87ab3d6f0395 626 PRINTS PR00418 DNA topoisomerase II family signature 266 279 5.8E-58 T 14-10-2018 DA442_02215 189715dca42c275023db87ab3d6f0395 626 PRINTS PR00418 DNA topoisomerase II family signature 517 529 5.8E-58 T 14-10-2018 DA442_02215 189715dca42c275023db87ab3d6f0395 626 PRINTS PR00418 DNA topoisomerase II family signature 560 576 5.8E-58 T 14-10-2018 DA442_02215 189715dca42c275023db87ab3d6f0395 626 PRINTS PR00418 DNA topoisomerase II family signature 66 79 5.8E-58 T 14-10-2018 DA442_13140 dc5671f519df8c5805f99ffdba382916 343 TIGRFAM TIGR03536 DapD_gpp: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 343 4.7E-180 T 14-10-2018 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria KEGG: 00300+2.3.1.117 DA442_13140 dc5671f519df8c5805f99ffdba382916 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 253 285 1.1E-11 T 14-10-2018 IPR001451 Hexapeptide repeat DA442_13140 dc5671f519df8c5805f99ffdba382916 343 SUPERFAMILY SSF51161 90 324 5.68E-35 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily DA442_13140 dc5671f519df8c5805f99ffdba382916 343 Gene3D G3DSA:2.160.10.10 172 343 1.6E-69 T 14-10-2018 DA442_13140 dc5671f519df8c5805f99ffdba382916 343 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 131 171 2.2E-16 T 14-10-2018 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 DA442_13140 dc5671f519df8c5805f99ffdba382916 343 Gene3D G3DSA:3.30.70.2010 1 130 3.4E-39 T 14-10-2018 DA442_13140 dc5671f519df8c5805f99ffdba382916 343 Gene3D G3DSA:3.30.60.70 131 171 1.2E-20 T 14-10-2018 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily KEGG: 00300+2.3.1.117 DA442_13140 dc5671f519df8c5805f99ffdba382916 343 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 340 46.069 T 14-10-2018 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117 DA442_03125 f14fb03099df745256208bf077cd3c39 64 PIRSF PIRSF039003 1 64 6.1E-36 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 DA442_03125 f14fb03099df745256208bf077cd3c39 64 Pfam PF04384 Iron-sulphur cluster assembly 1 63 3.9E-35 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 DA442_03125 f14fb03099df745256208bf077cd3c39 64 SUPERFAMILY SSF140319 1 62 3.4E-29 T 14-10-2018 IPR036762 IscX-like superfamily DA442_03125 f14fb03099df745256208bf077cd3c39 64 Gene3D G3DSA:1.10.10.600 1 64 3.3E-30 T 14-10-2018 IPR036762 IscX-like superfamily DA442_03125 f14fb03099df745256208bf077cd3c39 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 64 4.8E-36 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 DA442_08810 e814979ec1fc838ec3109608137c51c6 387 Gene3D G3DSA:1.10.3290.10 74 387 2.2E-125 T 14-10-2018 IPR036597 Fido-like domain superfamily DA442_08810 e814979ec1fc838ec3109608137c51c6 387 SUPERFAMILY SSF140931 264 372 1.57E-6 T 14-10-2018 IPR036597 Fido-like domain superfamily DA442_08810 e814979ec1fc838ec3109608137c51c6 387 Pfam PF02661 Fic/DOC family 278 362 5.6E-5 T 14-10-2018 IPR003812 Fido domain DA442_04550 59ff60715d17d594c86dc19341dfc751 563 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 544 1.6E-17 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain DA442_04550 59ff60715d17d594c86dc19341dfc751 563 Gene3D G3DSA:3.30.300.310 458 559 5.6E-30 T 14-10-2018 DA442_04550 59ff60715d17d594c86dc19341dfc751 563 SUPERFAMILY SSF56801 13 553 4.06E-150 T 14-10-2018 DA442_04550 59ff60715d17d594c86dc19341dfc751 563 Gene3D G3DSA:3.40.50.12780 9 457 7.8E-118 T 14-10-2018 DA442_04550 59ff60715d17d594c86dc19341dfc751 563 Pfam PF00501 AMP-binding enzyme 29 461 2.7E-107 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DA442_04550 59ff60715d17d594c86dc19341dfc751 563 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 14-10-2018 IPR020845 AMP-binding, conserved site DA442_20175 0c83963c1a878df5af1e3db90d2172ff 144 SUPERFAMILY SSF55729 2 140 1.43E-26 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_20175 0c83963c1a878df5af1e3db90d2172ff 144 Pfam PF00583 Acetyltransferase (GNAT) family 24 121 2.5E-14 T 14-10-2018 IPR000182 GNAT domain DA442_20175 0c83963c1a878df5af1e3db90d2172ff 144 Gene3D G3DSA:3.40.630.30 1 143 3.0E-31 T 14-10-2018 DA442_14525 8ed8b555f90b42e5fe1d18667916c5a7 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 471 1.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_14525 8ed8b555f90b42e5fe1d18667916c5a7 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 457 1.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_14525 8ed8b555f90b42e5fe1d18667916c5a7 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 496 1.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_14525 8ed8b555f90b42e5fe1d18667916c5a7 932 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 515 1.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_14525 8ed8b555f90b42e5fe1d18667916c5a7 932 Gene3D G3DSA:1.20.120.160 819 932 1.3E-30 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 DA442_14525 8ed8b555f90b42e5fe1d18667916c5a7 932 Gene3D G3DSA:1.20.1480.50 161 270 1.4E-7 T 14-10-2018 DA442_14525 8ed8b555f90b42e5fe1d18667916c5a7 932 SUPERFAMILY SSF55874 344 516 1.1E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_14525 8ed8b555f90b42e5fe1d18667916c5a7 932 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 175 3.9E-53 T 14-10-2018 IPR019247 Histidine kinase BarA, N-terminal DA442_14525 8ed8b555f90b42e5fe1d18667916c5a7 932 SMART SM00388 290 355 2.9E-24 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_14525 8ed8b555f90b42e5fe1d18667916c5a7 932 Pfam PF01627 Hpt domain 840 919 6.2E-11 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 DA442_14525 8ed8b555f90b42e5fe1d18667916c5a7 932 SUPERFAMILY SSF52172 533 644 2.64E-8 T 14-10-2018 IPR011006 CheY-like superfamily DA442_14525 8ed8b555f90b42e5fe1d18667916c5a7 932 Gene3D G3DSA:3.30.565.10 357 521 1.7E-51 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_14525 8ed8b555f90b42e5fe1d18667916c5a7 932 SUPERFAMILY SSF47384 275 356 9.61E-23 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DA442_14525 8ed8b555f90b42e5fe1d18667916c5a7 932 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 402 517 6.3E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_14525 8ed8b555f90b42e5fe1d18667916c5a7 932 SMART SM00304 198 250 3.1E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_14525 8ed8b555f90b42e5fe1d18667916c5a7 932 SMART SM00448 668 781 7.7E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_14525 8ed8b555f90b42e5fe1d18667916c5a7 932 Gene3D G3DSA:1.10.287.130 276 356 6.6E-27 T 14-10-2018 DA442_14525 8ed8b555f90b42e5fe1d18667916c5a7 932 SUPERFAMILY SSF158472 200 247 1.06E-6 T 14-10-2018 DA442_14525 8ed8b555f90b42e5fe1d18667916c5a7 932 Pfam PF00512 His Kinase A (phospho-acceptor) domain 291 355 3.5E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_14525 8ed8b555f90b42e5fe1d18667916c5a7 932 SMART SM00387 402 518 3.7E-38 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_14525 8ed8b555f90b42e5fe1d18667916c5a7 932 SMART SM00073 829 927 1.3E-9 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 DA442_14525 8ed8b555f90b42e5fe1d18667916c5a7 932 Pfam PF00072 Response regulator receiver domain 670 780 9.9E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_14525 8ed8b555f90b42e5fe1d18667916c5a7 932 SUPERFAMILY SSF47226 764 919 2.75E-22 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 DA442_14525 8ed8b555f90b42e5fe1d18667916c5a7 932 Gene3D G3DSA:3.40.50.2300 656 790 2.4E-39 T 14-10-2018 DA442_14525 8ed8b555f90b42e5fe1d18667916c5a7 932 SUPERFAMILY SSF52172 667 784 1.24E-35 T 14-10-2018 IPR011006 CheY-like superfamily DA442_06250 d090c72cc9a540d4655af2d8add50cc8 660 SUPERFAMILY SSF56935 321 477 6.54E-5 T 14-10-2018 DA442_06250 d090c72cc9a540d4655af2d8add50cc8 660 SUPERFAMILY SSF56935 428 634 4.4E-9 T 14-10-2018 DA442_06250 d090c72cc9a540d4655af2d8add50cc8 660 Pfam PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB 58 660 2.9E-165 T 14-10-2018 IPR020016 Decahaem-associated outer membrane protein, MtrB/PioB DA442_06250 d090c72cc9a540d4655af2d8add50cc8 660 TIGRFAM TIGR03509 OMP_MtrB_PioB: decaheme-associated outer membrane protein, MtrB/PioB family 49 660 2.9E-206 T 14-10-2018 IPR020016 Decahaem-associated outer membrane protein, MtrB/PioB DA442_00725 384c515c380041c5e85a8c11f7091aee 227 Gene3D G3DSA:2.10.70.20 162 210 2.7E-17 T 14-10-2018 DA442_00725 384c515c380041c5e85a8c11f7091aee 227 SUPERFAMILY SSF54523 49 212 1.49E-58 T 14-10-2018 DA442_00725 384c515c380041c5e85a8c11f7091aee 227 Pfam PF11612 Type II secretion system (T2SS), protein J 68 205 1.5E-40 T 14-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 DA442_00725 384c515c380041c5e85a8c11f7091aee 227 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 16 36 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DA442_00725 384c515c380041c5e85a8c11f7091aee 227 Pfam PF07963 Prokaryotic N-terminal methylation motif 12 38 1.4E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DA442_00725 384c515c380041c5e85a8c11f7091aee 227 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 16 38 2.4E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DA442_00725 384c515c380041c5e85a8c11f7091aee 227 Gene3D G3DSA:3.10.610.10 47 160 2.0E-35 T 14-10-2018 DA442_00725 384c515c380041c5e85a8c11f7091aee 227 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 16 207 1.5E-80 T 14-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 DA442_07745 3363034104deb91472bd17010f914a73 242 Gene3D G3DSA:1.10.340.30 51 177 2.0E-18 T 14-10-2018 DA442_07745 3363034104deb91472bd17010f914a73 242 SUPERFAMILY SSF48150 53 198 5.18E-40 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 DA442_07745 3363034104deb91472bd17010f914a73 242 Pfam PF03352 Methyladenine glycosylase 60 152 7.3E-15 T 14-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 DA442_25160 3dc9a77110f514f2664bec2e8dfa0b4a 209 SUPERFAMILY SSF47616 77 208 1.5E-40 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DA442_25160 3dc9a77110f514f2664bec2e8dfa0b4a 209 Gene3D G3DSA:3.40.30.10 8 92 9.9E-23 T 14-10-2018 DA442_25160 3dc9a77110f514f2664bec2e8dfa0b4a 209 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 74 6.0E-13 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DA442_25160 3dc9a77110f514f2664bec2e8dfa0b4a 209 SUPERFAMILY SSF52833 1 86 1.47E-15 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_25160 3dc9a77110f514f2664bec2e8dfa0b4a 209 Gene3D G3DSA:1.20.1050.10 93 209 7.8E-21 T 14-10-2018 DA442_25160 3dc9a77110f514f2664bec2e8dfa0b4a 209 Pfam PF04399 Glutaredoxin 2, C terminal domain 85 208 4.4E-34 T 14-10-2018 IPR007494 Glutaredoxin 2, C-terminal DA442_25160 3dc9a77110f514f2664bec2e8dfa0b4a 209 TIGRFAM TIGR02182 GRXB: glutaredoxin, GrxB family 2 208 4.1E-72 T 14-10-2018 IPR011901 Glutaredoxin-2 GO:0005829|GO:0097573 DA442_21860 e35f12d4c4c127c1672738f59ea70837 393 Gene3D G3DSA:1.20.1250.20 200 385 3.9E-15 T 14-10-2018 DA442_21860 e35f12d4c4c127c1672738f59ea70837 393 Gene3D G3DSA:1.20.1250.20 6 196 4.4E-7 T 14-10-2018 DA442_21860 e35f12d4c4c127c1672738f59ea70837 393 Pfam PF07690 Major Facilitator Superfamily 15 345 2.2E-14 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DA442_21860 e35f12d4c4c127c1672738f59ea70837 393 SUPERFAMILY SSF103473 14 378 1.7E-36 T 14-10-2018 IPR036259 MFS transporter superfamily DA442_18195 06d3da230d7d26266f325daa2bb6706a 668 Gene3D G3DSA:2.170.130.10 42 149 4.2E-30 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DA442_18195 06d3da230d7d26266f325daa2bb6706a 668 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 651 668 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site DA442_18195 06d3da230d7d26266f325daa2bb6706a 668 Gene3D G3DSA:2.40.170.20 151 668 1.1E-110 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DA442_18195 06d3da230d7d26266f325daa2bb6706a 668 Pfam PF00593 TonB dependent receptor 232 666 5.7E-40 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DA442_18195 06d3da230d7d26266f325daa2bb6706a 668 SUPERFAMILY SSF56935 36 668 1.87E-85 T 14-10-2018 DA442_18195 06d3da230d7d26266f325daa2bb6706a 668 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 137 3.7E-12 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain DA442_18195 06d3da230d7d26266f325daa2bb6706a 668 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 52 668 1.7E-84 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 DA442_01085 ff0fda9e5eb5f77725ceab247aeba03b 396 Pfam PF02719 Polysaccharide biosynthesis protein 36 335 1.4E-44 T 14-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain DA442_01085 ff0fda9e5eb5f77725ceab247aeba03b 396 Gene3D G3DSA:3.40.50.720 9 371 3.6E-159 T 14-10-2018 DA442_01085 ff0fda9e5eb5f77725ceab247aeba03b 396 SUPERFAMILY SSF51735 34 307 2.86E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_01085 ff0fda9e5eb5f77725ceab247aeba03b 396 Gene3D G3DSA:3.90.25.40 201 311 3.6E-159 T 14-10-2018 DA442_24420 614a15b62031e8d0514c5739fdaf0489 574 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 392 561 3.4E-9 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DA442_24420 614a15b62031e8d0514c5739fdaf0489 574 Gene3D G3DSA:1.10.3720.10 28 291 4.6E-47 T 14-10-2018 IPR035906 MetI-like superfamily DA442_24420 614a15b62031e8d0514c5739fdaf0489 574 SUPERFAMILY SSF161098 305 558 9.29E-33 T 14-10-2018 IPR035906 MetI-like superfamily DA442_24420 614a15b62031e8d0514c5739fdaf0489 574 SUPERFAMILY SSF161098 31 284 1.74E-40 T 14-10-2018 IPR035906 MetI-like superfamily DA442_24420 614a15b62031e8d0514c5739fdaf0489 574 TIGRFAM TIGR03262 PhnU2: putative 2-aminoethylphosphonate ABC transporter, permease protein 32 574 1.6E-253 T 14-10-2018 IPR017664 2-aminoethylphosphonate ABC transport system, permease protein, putative DA442_24420 614a15b62031e8d0514c5739fdaf0489 574 Gene3D G3DSA:1.10.3720.10 310 566 4.0E-29 T 14-10-2018 IPR035906 MetI-like superfamily DA442_24345 d753f85e3a98f0b960587761de0661d8 654 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_24345 d753f85e3a98f0b960587761de0661d8 654 SUPERFAMILY SSF52540 5 237 3.38E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_24345 d753f85e3a98f0b960587761de0661d8 654 Gene3D G3DSA:3.40.50.300 3 264 9.0E-72 T 14-10-2018 DA442_24345 d753f85e3a98f0b960587761de0661d8 654 Pfam PF02687 FtsX-like permease family 559 647 4.3E-11 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DA442_24345 d753f85e3a98f0b960587761de0661d8 654 Pfam PF00005 ABC transporter 25 173 5.2E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_24345 d753f85e3a98f0b960587761de0661d8 654 Pfam PF12704 MacB-like periplasmic core domain 279 496 1.0E-40 T 14-10-2018 IPR025857 MacB-like periplasmic core domain DA442_24345 d753f85e3a98f0b960587761de0661d8 654 SMART SM00382 34 221 1.1E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_02270 67bb5ecb1c2a67a3d2bcc5558626ad4e 421 Pfam PF00033 Cytochrome b/b6/petB 23 211 8.3E-66 T 14-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 DA442_02270 67bb5ecb1c2a67a3d2bcc5558626ad4e 421 Gene3D G3DSA:1.20.810.10 1 421 1.3E-149 T 14-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 DA442_02270 67bb5ecb1c2a67a3d2bcc5558626ad4e 421 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 295 396 5.5E-41 T 14-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 DA442_02270 67bb5ecb1c2a67a3d2bcc5558626ad4e 421 SUPERFAMILY SSF81648 297 412 1.13E-33 T 14-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 DA442_02270 67bb5ecb1c2a67a3d2bcc5558626ad4e 421 PIRSF PIRSF038885 1 421 6.5E-153 T 14-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 DA442_02270 67bb5ecb1c2a67a3d2bcc5558626ad4e 421 SUPERFAMILY SSF81342 6 296 1.73E-92 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 DA442_22995 84fac16ec16315741c4b7f9b21a9d601 307 SUPERFAMILY SSF46689 252 301 2.2E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_22995 84fac16ec16315741c4b7f9b21a9d601 307 SMART SM00342 216 299 1.4E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_22995 84fac16ec16315741c4b7f9b21a9d601 307 Pfam PF12833 Helix-turn-helix domain 222 297 1.4E-16 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_22995 84fac16ec16315741c4b7f9b21a9d601 307 SUPERFAMILY SSF46689 199 250 3.11E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_22995 84fac16ec16315741c4b7f9b21a9d601 307 Pfam PF06719 AraC-type transcriptional regulator N-terminus 36 187 1.8E-48 T 14-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal DA442_22995 84fac16ec16315741c4b7f9b21a9d601 307 Gene3D G3DSA:1.10.10.60 199 303 7.3E-24 T 14-10-2018 DA442_25180 6ce7c5e2cb74a6b8c20b9b4f7c3c5392 527 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 504 50.948 T 14-10-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 DA442_25180 6ce7c5e2cb74a6b8c20b9b4f7c3c5392 527 Gene3D G3DSA:3.40.50.300 214 411 8.5E-46 T 14-10-2018 DA442_25180 6ce7c5e2cb74a6b8c20b9b4f7c3c5392 527 Pfam PF00271 Helicase conserved C-terminal domain 232 338 2.0E-26 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_25180 6ce7c5e2cb74a6b8c20b9b4f7c3c5392 527 SMART SM00487 20 221 5.0E-63 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DA442_25180 6ce7c5e2cb74a6b8c20b9b4f7c3c5392 527 Gene3D G3DSA:3.40.50.300 1 209 3.9E-76 T 14-10-2018 DA442_25180 6ce7c5e2cb74a6b8c20b9b4f7c3c5392 527 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DA442_25180 6ce7c5e2cb74a6b8c20b9b4f7c3c5392 527 SUPERFAMILY SSF52540 73 359 3.32E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_25180 6ce7c5e2cb74a6b8c20b9b4f7c3c5392 527 Pfam PF00270 DEAD/DEAH box helicase 26 194 6.6E-48 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DA442_25180 6ce7c5e2cb74a6b8c20b9b4f7c3c5392 527 SMART SM00490 257 338 6.7E-32 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_13845 82559abdbfdb4036be29cb3cca3909cf 679 SUPERFAMILY SSF141868 427 674 1.44E-83 T 14-10-2018 IPR035919 EAL domain superfamily DA442_13845 82559abdbfdb4036be29cb3cca3909cf 679 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 120 2.0E-8 T 14-10-2018 IPR000014 PAS domain DA442_13845 82559abdbfdb4036be29cb3cca3909cf 679 SMART SM00091 8 74 9.3E-4 T 14-10-2018 IPR000014 PAS domain DA442_13845 82559abdbfdb4036be29cb3cca3909cf 679 SMART SM00091 131 198 0.039 T 14-10-2018 IPR000014 PAS domain DA442_13845 82559abdbfdb4036be29cb3cca3909cf 679 Gene3D G3DSA:3.30.450.20 129 238 3.5E-7 T 14-10-2018 DA442_13845 82559abdbfdb4036be29cb3cca3909cf 679 Pfam PF08448 PAS fold 15 119 7.4E-8 T 14-10-2018 IPR013656 PAS fold-4 DA442_13845 82559abdbfdb4036be29cb3cca3909cf 679 Gene3D G3DSA:3.30.450.20 3 128 7.3E-13 T 14-10-2018 DA442_13845 82559abdbfdb4036be29cb3cca3909cf 679 Gene3D G3DSA:3.30.70.270 250 422 3.4E-49 T 14-10-2018 DA442_13845 82559abdbfdb4036be29cb3cca3909cf 679 Pfam PF13188 PAS domain 133 176 1.6E-5 T 14-10-2018 IPR000014 PAS domain DA442_13845 82559abdbfdb4036be29cb3cca3909cf 679 SUPERFAMILY SSF55785 115 210 2.27E-8 T 14-10-2018 IPR035965 PAS domain superfamily DA442_13845 82559abdbfdb4036be29cb3cca3909cf 679 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 253 407 1.8E-36 T 14-10-2018 IPR000160 GGDEF domain DA442_13845 82559abdbfdb4036be29cb3cca3909cf 679 SUPERFAMILY SSF55785 5 115 1.92E-10 T 14-10-2018 IPR035965 PAS domain superfamily DA442_13845 82559abdbfdb4036be29cb3cca3909cf 679 Pfam PF00990 Diguanylate cyclase, GGDEF domain 253 406 1.9E-42 T 14-10-2018 IPR000160 GGDEF domain DA442_13845 82559abdbfdb4036be29cb3cca3909cf 679 Pfam PF00563 EAL domain 427 661 3.1E-72 T 14-10-2018 IPR001633 EAL domain DA442_13845 82559abdbfdb4036be29cb3cca3909cf 679 SMART SM00052 420 666 4.8E-106 T 14-10-2018 IPR001633 EAL domain DA442_13845 82559abdbfdb4036be29cb3cca3909cf 679 Gene3D G3DSA:3.20.20.450 423 675 1.7E-94 T 14-10-2018 IPR035919 EAL domain superfamily DA442_13845 82559abdbfdb4036be29cb3cca3909cf 679 SUPERFAMILY SSF55073 258 412 2.43E-45 T 14-10-2018 IPR029787 Nucleotide cyclase DA442_13845 82559abdbfdb4036be29cb3cca3909cf 679 SMART SM00267 243 410 2.0E-52 T 14-10-2018 IPR000160 GGDEF domain DA442_14820 3e580b2f8c1dbeb253f5c3ee67494288 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 23 238 30.683 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 DA442_14820 3e580b2f8c1dbeb253f5c3ee67494288 239 Pfam PF02390 Putative methyltransferase 62 232 2.5E-58 T 14-10-2018 DA442_14820 3e580b2f8c1dbeb253f5c3ee67494288 239 Gene3D G3DSA:3.40.50.150 29 239 3.8E-70 T 14-10-2018 DA442_14820 3e580b2f8c1dbeb253f5c3ee67494288 239 SUPERFAMILY SSF53335 16 238 2.39E-35 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_14820 3e580b2f8c1dbeb253f5c3ee67494288 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 47 238 7.4E-67 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 DA442_04440 482e02d1c5c9521a54c1af0bbd4ee1f0 941 Gene3D G3DSA:3.40.50.970 168 534 1.7E-146 T 14-10-2018 DA442_04440 482e02d1c5c9521a54c1af0bbd4ee1f0 941 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 791 933 4.0E-55 T 14-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 DA442_04440 482e02d1c5c9521a54c1af0bbd4ee1f0 941 Gene3D G3DSA:3.40.50.12470 557 803 1.5E-172 T 14-10-2018 DA442_04440 482e02d1c5c9521a54c1af0bbd4ee1f0 941 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 933 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 DA442_04440 482e02d1c5c9521a54c1af0bbd4ee1f0 941 PIRSF PIRSF000157 1 935 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 DA442_04440 482e02d1c5c9521a54c1af0bbd4ee1f0 941 Pfam PF00676 Dehydrogenase E1 component 221 514 2.0E-48 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 DA442_04440 482e02d1c5c9521a54c1af0bbd4ee1f0 941 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 50 1.1E-13 T 14-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 DA442_04440 482e02d1c5c9521a54c1af0bbd4ee1f0 941 Gene3D G3DSA:1.10.287.1150 85 167 1.1E-30 T 14-10-2018 DA442_04440 482e02d1c5c9521a54c1af0bbd4ee1f0 941 Gene3D G3DSA:3.40.50.11610 724 930 1.5E-172 T 14-10-2018 DA442_04440 482e02d1c5c9521a54c1af0bbd4ee1f0 941 SUPERFAMILY SSF52518 122 532 4.49E-88 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DA442_04440 482e02d1c5c9521a54c1af0bbd4ee1f0 941 SUPERFAMILY SSF52518 577 794 3.62E-53 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DA442_04440 482e02d1c5c9521a54c1af0bbd4ee1f0 941 SMART SM00861 594 787 4.0E-64 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DA442_04440 482e02d1c5c9521a54c1af0bbd4ee1f0 941 Pfam PF02779 Transketolase, pyrimidine binding domain 593 788 8.6E-67 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DA442_11500 dae02ea0c2d3fe185e3522afe4186eaa 77 SUPERFAMILY SSF47336 2 76 1.2E-23 T 14-10-2018 IPR036736 ACP-like superfamily DA442_11500 dae02ea0c2d3fe185e3522afe4186eaa 77 Pfam PF00550 Phosphopantetheine attachment site 6 73 2.2E-16 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain DA442_11500 dae02ea0c2d3fe185e3522afe4186eaa 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 6.6E-37 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 DA442_11500 dae02ea0c2d3fe185e3522afe4186eaa 77 Gene3D G3DSA:1.10.1200.10 1 76 1.9E-30 T 14-10-2018 IPR036736 ACP-like superfamily DA442_11500 dae02ea0c2d3fe185e3522afe4186eaa 77 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site DA442_11500 dae02ea0c2d3fe185e3522afe4186eaa 77 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.938 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 DA442_13370 858f217d8864344ee6b4b3a8fd5cd1af 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.6E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_13370 858f217d8864344ee6b4b3a8fd5cd1af 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.6E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_13370 858f217d8864344ee6b4b3a8fd5cd1af 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.6E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_13370 858f217d8864344ee6b4b3a8fd5cd1af 308 Gene3D G3DSA:3.40.190.10 163 259 1.1E-45 T 14-10-2018 DA442_13370 858f217d8864344ee6b4b3a8fd5cd1af 308 Gene3D G3DSA:3.40.190.10 103 286 1.1E-45 T 14-10-2018 DA442_13370 858f217d8864344ee6b4b3a8fd5cd1af 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 3.9E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_13370 858f217d8864344ee6b4b3a8fd5cd1af 308 SUPERFAMILY SSF53850 95 292 5.25E-36 T 14-10-2018 DA442_13370 858f217d8864344ee6b4b3a8fd5cd1af 308 Pfam PF03466 LysR substrate binding domain 94 289 1.3E-29 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_13370 858f217d8864344ee6b4b3a8fd5cd1af 308 SUPERFAMILY SSF46785 4 87 1.08E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_13370 858f217d8864344ee6b4b3a8fd5cd1af 308 Gene3D G3DSA:1.10.10.10 7 94 7.5E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_22350 0267d9de065a9f4a6bc1ce53939cfda1 150 Pfam PF13279 Thioesterase-like superfamily 16 134 3.4E-20 T 14-10-2018 DA442_22350 0267d9de065a9f4a6bc1ce53939cfda1 150 SUPERFAMILY SSF54637 7 135 2.43E-32 T 14-10-2018 IPR029069 HotDog domain superfamily DA442_22350 0267d9de065a9f4a6bc1ce53939cfda1 150 Gene3D G3DSA:3.10.129.10 2 138 2.8E-38 T 14-10-2018 DA442_01415 4173539f4513e37e52a3ecd2869efe15 73 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_01415 4173539f4513e37e52a3ecd2869efe15 73 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 1.1E-35 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_01415 4173539f4513e37e52a3ecd2869efe15 73 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 69 32.484 T 14-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_01415 4173539f4513e37e52a3ecd2869efe15 73 Pfam PF01197 Ribosomal protein L31 1 66 3.8E-32 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_01415 4173539f4513e37e52a3ecd2869efe15 73 SUPERFAMILY SSF143800 1 68 2.63E-27 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01415 4173539f4513e37e52a3ecd2869efe15 73 Gene3D G3DSA:2.30.170.50 1 71 1.6E-33 T 14-10-2018 DA442_01415 4173539f4513e37e52a3ecd2869efe15 73 PRINTS PR01249 Ribosomal protein L31 signature 2 19 7.1E-23 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_01415 4173539f4513e37e52a3ecd2869efe15 73 PRINTS PR01249 Ribosomal protein L31 signature 32 47 7.1E-23 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_01415 4173539f4513e37e52a3ecd2869efe15 73 PRINTS PR01249 Ribosomal protein L31 signature 47 65 7.1E-23 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_02000 37eecc9f00b4e080792aa77f9f0185c5 241 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 182 224 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DA442_02000 37eecc9f00b4e080792aa77f9f0185c5 241 SMART SM00342 146 228 2.8E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_02000 37eecc9f00b4e080792aa77f9f0185c5 241 Gene3D G3DSA:1.10.10.60 129 233 1.1E-23 T 14-10-2018 DA442_02000 37eecc9f00b4e080792aa77f9f0185c5 241 SUPERFAMILY SSF46689 182 229 4.93E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_02000 37eecc9f00b4e080792aa77f9f0185c5 241 Pfam PF12833 Helix-turn-helix domain 153 229 9.8E-14 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_02000 37eecc9f00b4e080792aa77f9f0185c5 241 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 212 228 2.5E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DA442_02000 37eecc9f00b4e080792aa77f9f0185c5 241 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 197 212 2.5E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DA442_17340 99b6eb94aa1155656b016f26013df254 458 SUPERFAMILY SSF51735 232 376 1.79E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_17340 99b6eb94aa1155656b016f26013df254 458 Gene3D G3DSA:3.40.50.720 233 366 2.0E-38 T 14-10-2018 DA442_17340 99b6eb94aa1155656b016f26013df254 458 Gene3D G3DSA:3.40.50.720 2 139 1.1E-51 T 14-10-2018 DA442_17340 99b6eb94aa1155656b016f26013df254 458 Pfam PF02254 TrkA-N domain 3 123 2.7E-29 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 DA442_17340 99b6eb94aa1155656b016f26013df254 458 Pfam PF02254 TrkA-N domain 235 350 4.1E-25 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 DA442_17340 99b6eb94aa1155656b016f26013df254 458 SUPERFAMILY SSF116726 136 223 2.62E-9 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DA442_17340 99b6eb94aa1155656b016f26013df254 458 Gene3D G3DSA:3.30.70.1450 140 232 1.5E-21 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DA442_17340 99b6eb94aa1155656b016f26013df254 458 SUPERFAMILY SSF51735 1 151 3.04E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_17340 99b6eb94aa1155656b016f26013df254 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 4.9E-34 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 DA442_17340 99b6eb94aa1155656b016f26013df254 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 4.9E-34 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 DA442_17340 99b6eb94aa1155656b016f26013df254 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 4.9E-34 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 DA442_17340 99b6eb94aa1155656b016f26013df254 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 4.9E-34 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 DA442_17340 99b6eb94aa1155656b016f26013df254 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 4.9E-34 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 DA442_17340 99b6eb94aa1155656b016f26013df254 458 Pfam PF02080 TrkA-C domain 156 225 4.2E-11 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DA442_17340 99b6eb94aa1155656b016f26013df254 458 Pfam PF02080 TrkA-C domain 391 449 6.0E-9 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DA442_17340 99b6eb94aa1155656b016f26013df254 458 Gene3D G3DSA:3.30.70.1450 367 458 2.9E-28 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DA442_17340 99b6eb94aa1155656b016f26013df254 458 SUPERFAMILY SSF116726 366 437 5.75E-7 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DA442_07910 eb772fa336f8725ba430a338a6a45152 514 SUPERFAMILY SSF52172 3 186 1.18E-36 T 14-10-2018 IPR011006 CheY-like superfamily DA442_07910 eb772fa336f8725ba430a338a6a45152 514 SMART SM00448 3 114 9.0E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_07910 eb772fa336f8725ba430a338a6a45152 514 SUPERFAMILY SSF46689 457 505 4.44E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_07910 eb772fa336f8725ba430a338a6a45152 514 Gene3D G3DSA:3.40.50.2300 1 133 3.7E-30 T 14-10-2018 DA442_07910 eb772fa336f8725ba430a338a6a45152 514 Gene3D G3DSA:3.40.50.300 134 313 6.7E-64 T 14-10-2018 DA442_07910 eb772fa336f8725ba430a338a6a45152 514 Pfam PF02954 Bacterial regulatory protein, Fis family 464 500 2.9E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DA442_07910 eb772fa336f8725ba430a338a6a45152 514 SMART SM00382 162 304 3.4E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_07910 eb772fa336f8725ba430a338a6a45152 514 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DA442_07910 eb772fa336f8725ba430a338a6a45152 514 Gene3D G3DSA:1.10.10.60 458 501 4.9E-8 T 14-10-2018 DA442_07910 eb772fa336f8725ba430a338a6a45152 514 Gene3D G3DSA:1.10.8.60 314 395 2.2E-25 T 14-10-2018 DA442_07910 eb772fa336f8725ba430a338a6a45152 514 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site DA442_07910 eb772fa336f8725ba430a338a6a45152 514 SUPERFAMILY SSF52540 142 385 5.32E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_07910 eb772fa336f8725ba430a338a6a45152 514 Pfam PF00158 Sigma-54 interaction domain 143 308 2.5E-68 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DA442_07910 eb772fa336f8725ba430a338a6a45152 514 Pfam PF00072 Response regulator receiver domain 5 114 3.3E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_23835 329e9181b5e3f356928252c9a9b47d7e 263 Gene3D G3DSA:3.40.1190.20 1 262 3.0E-90 T 14-10-2018 IPR029056 Ribokinase-like DA442_23835 329e9181b5e3f356928252c9a9b47d7e 263 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 12 255 29.93 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DA442_23835 329e9181b5e3f356928252c9a9b47d7e 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 88 105 2.0E-34 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DA442_23835 329e9181b5e3f356928252c9a9b47d7e 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 119 133 2.0E-34 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DA442_23835 329e9181b5e3f356928252c9a9b47d7e 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 18 25 2.0E-34 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DA442_23835 329e9181b5e3f356928252c9a9b47d7e 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 62 70 2.0E-34 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DA442_23835 329e9181b5e3f356928252c9a9b47d7e 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 31 52 2.0E-34 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DA442_23835 329e9181b5e3f356928252c9a9b47d7e 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 163 180 2.0E-34 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DA442_23835 329e9181b5e3f356928252c9a9b47d7e 263 SUPERFAMILY SSF53613 6 257 1.44E-60 T 14-10-2018 IPR029056 Ribokinase-like DA442_23835 329e9181b5e3f356928252c9a9b47d7e 263 PIRSF PIRSF000513 4 263 1.2E-98 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DA442_23835 329e9181b5e3f356928252c9a9b47d7e 263 Pfam PF02110 Hydroxyethylthiazole kinase family 10 252 4.7E-73 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DA442_23835 329e9181b5e3f356928252c9a9b47d7e 263 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 10 253 8.9E-78 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DA442_08775 6d3b876160712688bc0a7c4ba70081d2 337 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 36 282 5.9E-21 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DA442_08775 6d3b876160712688bc0a7c4ba70081d2 337 Gene3D G3DSA:2.40.30.170 220 336 1.0E-35 T 14-10-2018 DA442_08775 6d3b876160712688bc0a7c4ba70081d2 337 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 50 70 1.7E-5 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DA442_08775 6d3b876160712688bc0a7c4ba70081d2 337 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 321 336 1.7E-5 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DA442_08775 6d3b876160712688bc0a7c4ba70081d2 337 Pfam PF00529 HlyD membrane-fusion protein of T1SS 283 332 1.6E-8 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DA442_08775 6d3b876160712688bc0a7c4ba70081d2 337 SUPERFAMILY SSF111369 101 276 2.09E-10 T 14-10-2018 DA442_08775 6d3b876160712688bc0a7c4ba70081d2 337 SUPERFAMILY SSF111369 38 94 9.42E-8 T 14-10-2018 DA442_21535 95ac20a06a6d90a748a2fb5242e851b4 292 PIRSF PIRSF000103 1 292 1.0E-77 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 DA442_21535 95ac20a06a6d90a748a2fb5242e851b4 292 Gene3D G3DSA:3.40.50.720 1 166 5.1E-52 T 14-10-2018 DA442_21535 95ac20a06a6d90a748a2fb5242e851b4 292 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 168 287 6.9E-32 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 DA442_21535 95ac20a06a6d90a748a2fb5242e851b4 292 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 6 163 6.6E-50 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 DA442_21535 95ac20a06a6d90a748a2fb5242e851b4 292 SUPERFAMILY SSF51735 4 166 4.68E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_21535 95ac20a06a6d90a748a2fb5242e851b4 292 Gene3D G3DSA:1.10.1040.10 167 292 2.8E-38 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DA442_21535 95ac20a06a6d90a748a2fb5242e851b4 292 SUPERFAMILY SSF48179 167 290 1.12E-38 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DA442_16815 dbcc22f39d7fc94a38c4506c3cd5a524 224 Gene3D G3DSA:3.40.50.300 1 223 1.9E-61 T 14-10-2018 DA442_16815 dbcc22f39d7fc94a38c4506c3cd5a524 224 Pfam PF00005 ABC transporter 18 165 2.4E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_16815 dbcc22f39d7fc94a38c4506c3cd5a524 224 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 6.5E-90 T 14-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 DA442_16815 dbcc22f39d7fc94a38c4506c3cd5a524 224 SUPERFAMILY SSF52540 1 220 5.87E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_16815 dbcc22f39d7fc94a38c4506c3cd5a524 224 SMART SM00382 27 215 5.9E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_16815 dbcc22f39d7fc94a38c4506c3cd5a524 224 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_05455 b6e1c277001d5b9f5390b4f5df7e695a 592 SUPERFAMILY SSF55261 288 419 6.87E-46 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 DA442_05455 b6e1c277001d5b9f5390b4f5df7e695a 592 Gene3D G3DSA:3.30.930.10 118 578 4.6E-195 T 14-10-2018 DA442_05455 b6e1c277001d5b9f5390b4f5df7e695a 592 SUPERFAMILY SSF50249 1 105 2.48E-34 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_05455 b6e1c277001d5b9f5390b4f5df7e695a 592 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 8.7E-266 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 DA442_05455 b6e1c277001d5b9f5390b4f5df7e695a 592 Gene3D G3DSA:2.40.50.140 1 106 8.8E-35 T 14-10-2018 DA442_05455 b6e1c277001d5b9f5390b4f5df7e695a 592 Pfam PF02938 GAD domain 307 406 1.2E-29 T 14-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 DA442_05455 b6e1c277001d5b9f5390b4f5df7e695a 592 SUPERFAMILY SSF55681 108 583 2.49E-100 T 14-10-2018 DA442_05455 b6e1c277001d5b9f5390b4f5df7e695a 592 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 8.3E-105 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DA442_05455 b6e1c277001d5b9f5390b4f5df7e695a 592 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 584 33.284 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 DA442_05455 b6e1c277001d5b9f5390b4f5df7e695a 592 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 6.6E-16 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 DA442_05455 b6e1c277001d5b9f5390b4f5df7e695a 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 2.7E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DA442_05455 b6e1c277001d5b9f5390b4f5df7e695a 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 2.7E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DA442_05455 b6e1c277001d5b9f5390b4f5df7e695a 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 2.7E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DA442_05455 b6e1c277001d5b9f5390b4f5df7e695a 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 2.7E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DA442_05455 b6e1c277001d5b9f5390b4f5df7e695a 592 Gene3D G3DSA:3.30.1360.30 271 420 4.6E-195 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 DA442_24840 72d0b6ab1af8e18a0cd7db55255bffba 166 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 8 98 9.4E-16 T 14-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis DA442_24840 72d0b6ab1af8e18a0cd7db55255bffba 166 SUPERFAMILY SSF53146 1 117 6.67E-21 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily DA442_24840 72d0b6ab1af8e18a0cd7db55255bffba 166 Gene3D G3DSA:3.30.420.130 3 108 5.3E-15 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily DA442_03175 748664d24e71a7919ef4c15d98746dc3 498 PIRSF PIRSF006485 1 473 3.5E-179 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 DA442_03175 748664d24e71a7919ef4c15d98746dc3 498 SUPERFAMILY SSF52540 141 471 4.78E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_03175 748664d24e71a7919ef4c15d98746dc3 498 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 6.4E-10 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DA442_03175 748664d24e71a7919ef4c15d98746dc3 498 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 6.4E-10 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DA442_03175 748664d24e71a7919ef4c15d98746dc3 498 SUPERFAMILY SSF52540 4 164 8.26E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_03175 748664d24e71a7919ef4c15d98746dc3 498 SMART SM00382 1 174 3.4 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_03175 748664d24e71a7919ef4c15d98746dc3 498 SMART SM00382 208 355 0.11 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_03175 748664d24e71a7919ef4c15d98746dc3 498 Pfam PF01926 50S ribosome-binding GTPase 212 329 1.8E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DA442_03175 748664d24e71a7919ef4c15d98746dc3 498 Pfam PF01926 50S ribosome-binding GTPase 5 120 1.2E-26 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DA442_03175 748664d24e71a7919ef4c15d98746dc3 498 Gene3D G3DSA:3.30.300.20 385 467 5.9E-20 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta DA442_03175 748664d24e71a7919ef4c15d98746dc3 498 Hamap MF_00195 GTPase Der [der]. 2 468 39.158 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 DA442_03175 748664d24e71a7919ef4c15d98746dc3 498 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 208 373 8.6E-26 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DA442_03175 748664d24e71a7919ef4c15d98746dc3 498 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 155 4.5E-22 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DA442_03175 748664d24e71a7919ef4c15d98746dc3 498 Gene3D G3DSA:3.40.50.300 204 382 4.7E-50 T 14-10-2018 DA442_03175 748664d24e71a7919ef4c15d98746dc3 498 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 465 5.3E-178 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 DA442_03175 748664d24e71a7919ef4c15d98746dc3 498 Gene3D G3DSA:3.40.50.300 2 160 1.7E-42 T 14-10-2018 DA442_03175 748664d24e71a7919ef4c15d98746dc3 498 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 385 464 3.2E-25 T 14-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like DA442_21295 ae8e6535a1469262ce192346ff49ffb4 282 PIRSF PIRSF006232 3 282 1.0E-83 T 14-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 DA442_21295 ae8e6535a1469262ce192346ff49ffb4 282 Pfam PF05726 Pirin C-terminal cupin domain 181 279 1.3E-27 T 14-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 DA442_21295 ae8e6535a1469262ce192346ff49ffb4 282 SUPERFAMILY SSF51182 6 280 2.23E-73 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DA442_21295 ae8e6535a1469262ce192346ff49ffb4 282 Gene3D G3DSA:2.60.120.10 143 249 2.4E-85 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DA442_21295 ae8e6535a1469262ce192346ff49ffb4 282 Pfam PF02678 Pirin 24 121 1.3E-32 T 14-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 DA442_21295 ae8e6535a1469262ce192346ff49ffb4 282 Gene3D G3DSA:2.60.120.10 18 275 2.4E-85 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DA442_18845 280248044cd3254ad5bd181c45e4f300 306 Pfam PF03466 LysR substrate binding domain 97 300 1.8E-26 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_18845 280248044cd3254ad5bd181c45e4f300 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 71 4.3E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_18845 280248044cd3254ad5bd181c45e4f300 306 SUPERFAMILY SSF53850 99 303 1.34E-27 T 14-10-2018 DA442_18845 280248044cd3254ad5bd181c45e4f300 306 Gene3D G3DSA:1.10.10.10 11 98 3.4E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_18845 280248044cd3254ad5bd181c45e4f300 306 SUPERFAMILY SSF46785 11 95 9.58E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_18845 280248044cd3254ad5bd181c45e4f300 306 Gene3D G3DSA:3.40.190.290 100 299 7.6E-40 T 14-10-2018 DA442_14490 b91cc1658d562689e07dda0346698ee9 433 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 430 2.3E-137 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DA442_14490 b91cc1658d562689e07dda0346698ee9 433 SUPERFAMILY SSF51604 143 428 8.06E-127 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily DA442_14490 b91cc1658d562689e07dda0346698ee9 433 SMART SM01193 4 134 1.6E-92 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DA442_14490 b91cc1658d562689e07dda0346698ee9 433 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 429 2.2E-207 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DA442_14490 b91cc1658d562689e07dda0346698ee9 433 PIRSF PIRSF001400 1 431 5.1E-192 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DA442_14490 b91cc1658d562689e07dda0346698ee9 433 Gene3D G3DSA:3.20.20.120 128 433 1.1E-132 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily DA442_14490 b91cc1658d562689e07dda0346698ee9 433 Gene3D G3DSA:3.30.390.10 1 127 6.2E-55 T 14-10-2018 IPR029017 Enolase-like, N-terminal DA442_14490 b91cc1658d562689e07dda0346698ee9 433 SMART SM01192 143 431 6.4E-214 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DA442_14490 b91cc1658d562689e07dda0346698ee9 433 Hamap MF_00318 Enolase [eno]. 2 417 44.504 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DA442_14490 b91cc1658d562689e07dda0346698ee9 433 ProSitePatterns PS00164 Enolase signature. 340 353 - T 14-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_14490 b91cc1658d562689e07dda0346698ee9 433 Pfam PF03952 Enolase, N-terminal domain 4 134 5.3E-58 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DA442_14490 b91cc1658d562689e07dda0346698ee9 433 PRINTS PR00148 Enolase signature 369 386 4.9E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DA442_14490 b91cc1658d562689e07dda0346698ee9 433 PRINTS PR00148 Enolase signature 317 328 4.9E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DA442_14490 b91cc1658d562689e07dda0346698ee9 433 PRINTS PR00148 Enolase signature 165 178 4.9E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DA442_14490 b91cc1658d562689e07dda0346698ee9 433 PRINTS PR00148 Enolase signature 340 354 4.9E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DA442_14490 b91cc1658d562689e07dda0346698ee9 433 PRINTS PR00148 Enolase signature 37 51 4.9E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DA442_14490 b91cc1658d562689e07dda0346698ee9 433 PRINTS PR00148 Enolase signature 107 123 4.9E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DA442_14490 b91cc1658d562689e07dda0346698ee9 433 SUPERFAMILY SSF54826 3 138 4.52E-56 T 14-10-2018 DA442_04415 f6d2b6c61548323072a558e096bca298 429 PIRSF PIRSF001369 38 429 2.0E-174 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type DA442_04415 f6d2b6c61548323072a558e096bca298 429 Gene3D G3DSA:2.20.28.60 1 50 1.6E-26 T 14-10-2018 DA442_04415 f6d2b6c61548323072a558e096bca298 429 Gene3D G3DSA:1.10.580.10 57 411 4.4E-151 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 DA442_04415 f6d2b6c61548323072a558e096bca298 429 SUPERFAMILY SSF48256 4 428 9.68E-170 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 DA442_04415 f6d2b6c61548323072a558e096bca298 429 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 DA442_04415 f6d2b6c61548323072a558e096bca298 429 Pfam PF00285 Citrate synthase, C-terminal domain 49 411 3.3E-135 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 DA442_04415 f6d2b6c61548323072a558e096bca298 429 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 422 2.3E-238 T 14-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 DA442_04415 f6d2b6c61548323072a558e096bca298 429 Gene3D G3DSA:1.10.230.10 268 376 4.4E-151 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain DA442_04415 f6d2b6c61548323072a558e096bca298 429 PRINTS PR00143 Citrate synthase signature 241 269 1.8E-54 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 DA442_04415 f6d2b6c61548323072a558e096bca298 429 PRINTS PR00143 Citrate synthase signature 296 316 1.8E-54 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 DA442_04415 f6d2b6c61548323072a558e096bca298 429 PRINTS PR00143 Citrate synthase signature 379 393 1.8E-54 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 DA442_04415 f6d2b6c61548323072a558e096bca298 429 PRINTS PR00143 Citrate synthase signature 219 234 1.8E-54 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 DA442_04415 f6d2b6c61548323072a558e096bca298 429 PRINTS PR00143 Citrate synthase signature 165 178 1.8E-54 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 DA442_04415 f6d2b6c61548323072a558e096bca298 429 PRINTS PR00143 Citrate synthase signature 359 375 1.8E-54 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 DA442_22010 e0804799cae5321ee68ef960441b2156 171 SUPERFAMILY SSF49329 25 170 5.63E-50 T 14-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 DA442_22010 e0804799cae5321ee68ef960441b2156 171 Gene3D G3DSA:2.60.40.200 21 171 1.6E-46 T 14-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 DA442_22010 e0804799cae5321ee68ef960441b2156 171 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 159 170 - T 14-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 DA442_22010 e0804799cae5321ee68ef960441b2156 171 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 32 170 4.4E-31 T 14-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 DA442_22010 e0804799cae5321ee68ef960441b2156 171 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 63 73 - T 14-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 DA442_15105 80471aea24c4fd89b7b616acfda1e18e 418 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 4.0E-182 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DA442_15105 80471aea24c4fd89b7b616acfda1e18e 418 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 11 407 1.6E-122 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 DA442_15105 80471aea24c4fd89b7b616acfda1e18e 418 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 43.79 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DA442_15105 80471aea24c4fd89b7b616acfda1e18e 418 Gene3D G3DSA:3.65.10.10 22 229 2.8E-171 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 DA442_15105 80471aea24c4fd89b7b616acfda1e18e 418 Gene3D G3DSA:3.65.10.10 12 414 2.8E-171 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 DA442_15105 80471aea24c4fd89b7b616acfda1e18e 418 SUPERFAMILY SSF55205 6 417 1.8E-141 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 DA442_18720 168e020e630607641e836fbc4b72d301 150 Pfam PF09722 Protein of unknown function (DUF2384) 98 147 7.5E-15 T 14-10-2018 IPR024467 Domain of unknown function DUF2384 DA442_18720 168e020e630607641e836fbc4b72d301 150 TIGRFAM TIGR02293 TAS_TIGR02293: putative toxin-antitoxin system antitoxin component, TIGR02293 family 24 150 9.2E-32 T 14-10-2018 IPR011979 Conserved hypothetical protein CHP02293 DA442_13640 894184dbc2112fc7f9357ad9e32ff796 168 Pfam PF13508 Acetyltransferase (GNAT) domain 42 146 2.9E-9 T 14-10-2018 IPR000182 GNAT domain DA442_13640 894184dbc2112fc7f9357ad9e32ff796 168 SUPERFAMILY SSF55729 17 147 5.95E-13 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_13640 894184dbc2112fc7f9357ad9e32ff796 168 Gene3D G3DSA:3.40.630.30 2 159 2.8E-44 T 14-10-2018 DA442_12140 d7a051d32065c47c98e6c9fc6391fdd9 264 Gene3D G3DSA:3.30.70.580 1 104 5.0E-40 T 14-10-2018 DA442_12140 d7a051d32065c47c98e6c9fc6391fdd9 264 Gene3D G3DSA:3.30.70.660 105 242 1.1E-48 T 14-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 DA442_12140 d7a051d32065c47c98e6c9fc6391fdd9 264 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 34.572 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_12140 d7a051d32065c47c98e6c9fc6391fdd9 264 PIRSF PIRSF001430 1 254 6.3E-77 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_12140 d7a051d32065c47c98e6c9fc6391fdd9 264 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 5.1E-73 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_12140 d7a051d32065c47c98e6c9fc6391fdd9 264 SUPERFAMILY SSF55120 1 257 6.04E-94 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_12140 d7a051d32065c47c98e6c9fc6391fdd9 264 Pfam PF01416 tRNA pseudouridine synthase 8 102 2.0E-10 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_12140 d7a051d32065c47c98e6c9fc6391fdd9 264 Pfam PF01416 tRNA pseudouridine synthase 144 244 4.6E-29 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_04935 ca40a2e97fb1c872af94e8da76cbe5a3 1037 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 9.0E-73 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_04935 ca40a2e97fb1c872af94e8da76cbe5a3 1037 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 9.0E-73 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_04935 ca40a2e97fb1c872af94e8da76cbe5a3 1037 PRINTS PR00702 Acriflavin resistance protein family signature 611 625 9.0E-73 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_04935 ca40a2e97fb1c872af94e8da76cbe5a3 1037 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 9.0E-73 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_04935 ca40a2e97fb1c872af94e8da76cbe5a3 1037 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 9.0E-73 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_04935 ca40a2e97fb1c872af94e8da76cbe5a3 1037 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 9.0E-73 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_04935 ca40a2e97fb1c872af94e8da76cbe5a3 1037 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 9.0E-73 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_04935 ca40a2e97fb1c872af94e8da76cbe5a3 1037 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 9.0E-73 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_04935 ca40a2e97fb1c872af94e8da76cbe5a3 1037 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 9.0E-73 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_04935 ca40a2e97fb1c872af94e8da76cbe5a3 1037 SUPERFAMILY SSF82866 290 488 8.76E-45 T 14-10-2018 DA442_04935 ca40a2e97fb1c872af94e8da76cbe5a3 1037 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 1.1E-276 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_04935 ca40a2e97fb1c872af94e8da76cbe5a3 1037 Gene3D G3DSA:3.30.2090.10 178 269 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DA442_04935 ca40a2e97fb1c872af94e8da76cbe5a3 1037 Gene3D G3DSA:3.30.70.1430 556 654 0.0 T 14-10-2018 DA442_04935 ca40a2e97fb1c872af94e8da76cbe5a3 1037 SUPERFAMILY SSF82714 183 266 3.14E-13 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DA442_04935 ca40a2e97fb1c872af94e8da76cbe5a3 1037 SUPERFAMILY SSF82714 704 788 3.92E-17 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DA442_04935 ca40a2e97fb1c872af94e8da76cbe5a3 1037 Gene3D G3DSA:1.20.1640.10 502 1005 0.0 T 14-10-2018 DA442_04935 ca40a2e97fb1c872af94e8da76cbe5a3 1037 Gene3D G3DSA:3.30.70.1320 134 326 0.0 T 14-10-2018 DA442_04935 ca40a2e97fb1c872af94e8da76cbe5a3 1037 Gene3D G3DSA:3.30.70.1430 40 799 0.0 T 14-10-2018 DA442_04935 ca40a2e97fb1c872af94e8da76cbe5a3 1037 Gene3D G3DSA:3.30.70.1440 655 848 0.0 T 14-10-2018 DA442_04935 ca40a2e97fb1c872af94e8da76cbe5a3 1037 SUPERFAMILY SSF82693 40 134 7.06E-25 T 14-10-2018 DA442_04935 ca40a2e97fb1c872af94e8da76cbe5a3 1037 SUPERFAMILY SSF82693 554 657 2.88E-17 T 14-10-2018 DA442_04935 ca40a2e97fb1c872af94e8da76cbe5a3 1037 Gene3D G3DSA:3.30.2090.10 703 791 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DA442_04935 ca40a2e97fb1c872af94e8da76cbe5a3 1037 Gene3D G3DSA:1.20.1640.10 10 501 0.0 T 14-10-2018 DA442_04935 ca40a2e97fb1c872af94e8da76cbe5a3 1037 SUPERFAMILY SSF82866 794 1009 3.01E-49 T 14-10-2018 DA442_04935 ca40a2e97fb1c872af94e8da76cbe5a3 1037 SUPERFAMILY SSF82693 139 324 9.16E-18 T 14-10-2018 DA442_13120 836ab59b23a735e0d1959a5df638527c 607 PIRSF PIRSF004950 1 606 1.6E-234 T 14-10-2018 IPR012159 Inner membrane protein YejM DA442_13120 836ab59b23a735e0d1959a5df638527c 607 Gene3D G3DSA:3.40.720.10 238 528 3.1E-52 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DA442_13120 836ab59b23a735e0d1959a5df638527c 607 Pfam PF11893 Domain of unknown function (DUF3413) 3 242 2.8E-50 T 14-10-2018 IPR024588 Inner membrane protein YejM, N-terminal DA442_13120 836ab59b23a735e0d1959a5df638527c 607 Pfam PF00884 Sulfatase 250 521 8.7E-33 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 DA442_13120 836ab59b23a735e0d1959a5df638527c 607 SUPERFAMILY SSF53649 247 571 5.23E-60 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DA442_01950 fc372506f059867dc68bd1e870c211f9 219 Gene3D G3DSA:3.40.50.1000 5 203 2.3E-48 T 14-10-2018 IPR023214 HAD superfamily DA442_01950 fc372506f059867dc68bd1e870c211f9 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 3.9E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DA442_01950 fc372506f059867dc68bd1e870c211f9 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 3.9E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DA442_01950 fc372506f059867dc68bd1e870c211f9 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 3.9E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DA442_01950 fc372506f059867dc68bd1e870c211f9 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 3.9E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DA442_01950 fc372506f059867dc68bd1e870c211f9 219 SUPERFAMILY SSF56784 1 213 1.95E-44 T 14-10-2018 IPR036412 HAD-like superfamily DA442_01950 fc372506f059867dc68bd1e870c211f9 219 Gene3D G3DSA:1.10.150.240 16 84 2.3E-48 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DA442_01950 fc372506f059867dc68bd1e870c211f9 219 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 104 184 4.8E-16 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DA442_01950 fc372506f059867dc68bd1e870c211f9 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 184 5.1E-30 T 14-10-2018 DA442_00740 7405d7890bd392fe0559165af6dfced6 164 SUPERFAMILY SSF103054 86 163 3.92E-25 T 14-10-2018 IPR023229 Type II secretion system protein M, periplasmic domain superfamily DA442_00740 7405d7890bd392fe0559165af6dfced6 164 PIRSF PIRSF006291 3 163 8.1E-41 T 14-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 DA442_00740 7405d7890bd392fe0559165af6dfced6 164 Pfam PF04612 Type II secretion system (T2SS), protein M 7 163 7.2E-56 T 14-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 DA442_00740 7405d7890bd392fe0559165af6dfced6 164 Gene3D G3DSA:3.30.1360.100 86 164 8.6E-31 T 14-10-2018 DA442_04070 3bc9cdab10bd865c7d73590857f09d17 308 PIRSF PIRSF002867 1 308 2.2E-103 T 14-10-2018 IPR024181 Chemotaxis response regulator CheV DA442_04070 3bc9cdab10bd865c7d73590857f09d17 308 Gene3D G3DSA:2.30.30.40 23 147 3.0E-28 T 14-10-2018 DA442_04070 3bc9cdab10bd865c7d73590857f09d17 308 Gene3D G3DSA:2.40.50.180 39 153 3.0E-28 T 14-10-2018 DA442_04070 3bc9cdab10bd865c7d73590857f09d17 308 Pfam PF01584 CheW-like domain 21 155 5.6E-34 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DA442_04070 3bc9cdab10bd865c7d73590857f09d17 308 SUPERFAMILY SSF52172 183 306 9.39E-26 T 14-10-2018 IPR011006 CheY-like superfamily DA442_04070 3bc9cdab10bd865c7d73590857f09d17 308 SMART SM00260 17 153 1.3E-23 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DA442_04070 3bc9cdab10bd865c7d73590857f09d17 308 SUPERFAMILY SSF50341 16 157 1.7E-35 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 DA442_04070 3bc9cdab10bd865c7d73590857f09d17 308 Gene3D G3DSA:3.40.50.2300 168 308 1.6E-25 T 14-10-2018 DA442_04070 3bc9cdab10bd865c7d73590857f09d17 308 SMART SM00448 182 302 6.8E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_04070 3bc9cdab10bd865c7d73590857f09d17 308 Pfam PF00072 Response regulator receiver domain 184 302 2.6E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_16900 68e13c6ac063ba5b7df0bbef70ee0492 407 Gene3D G3DSA:1.10.3210.10 197 407 1.4E-22 T 14-10-2018 DA442_16900 68e13c6ac063ba5b7df0bbef70ee0492 407 PIRSF PIRSF003180 1 407 2.0E-174 T 14-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing DA442_16900 68e13c6ac063ba5b7df0bbef70ee0492 407 Gene3D G3DSA:3.20.20.450 59 196 2.5E-17 T 14-10-2018 IPR035919 EAL domain superfamily DA442_16900 68e13c6ac063ba5b7df0bbef70ee0492 407 SMART SM00052 2 199 4.3E-4 T 14-10-2018 IPR001633 EAL domain DA442_16900 68e13c6ac063ba5b7df0bbef70ee0492 407 Pfam PF08668 HDOD domain 208 324 5.6E-13 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD DA442_16900 68e13c6ac063ba5b7df0bbef70ee0492 407 Pfam PF00563 EAL domain 68 194 4.4E-14 T 14-10-2018 IPR001633 EAL domain DA442_16900 68e13c6ac063ba5b7df0bbef70ee0492 407 SUPERFAMILY SSF141868 4 197 6.02E-28 T 14-10-2018 IPR035919 EAL domain superfamily DA442_16900 68e13c6ac063ba5b7df0bbef70ee0492 407 SUPERFAMILY SSF109604 185 404 5.65E-41 T 14-10-2018 DA442_01270 a0a42370f33854dd1d2d5fd5fb27e248 368 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 2 348 8.1E-165 T 14-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 DA442_01270 a0a42370f33854dd1d2d5fd5fb27e248 368 SUPERFAMILY SSF51735 2 347 1.04E-85 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_01270 a0a42370f33854dd1d2d5fd5fb27e248 368 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 341 1.6E-153 T 14-10-2018 IPR016040 NAD(P)-binding domain DA442_01270 a0a42370f33854dd1d2d5fd5fb27e248 368 Gene3D G3DSA:3.90.25.10 188 346 7.1E-163 T 14-10-2018 DA442_01270 a0a42370f33854dd1d2d5fd5fb27e248 368 Gene3D G3DSA:3.40.50.720 4 332 7.1E-163 T 14-10-2018 DA442_01270 a0a42370f33854dd1d2d5fd5fb27e248 368 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 2 351 54.513 T 14-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 DA442_07480 d5e378ae7ecfd1f2159545c7abcfce13 326 Gene3D G3DSA:1.10.10.10 16 103 7.7E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_07480 d5e378ae7ecfd1f2159545c7abcfce13 326 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 83 2.5E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_07480 d5e378ae7ecfd1f2159545c7abcfce13 326 SUPERFAMILY SSF53850 106 316 1.09E-29 T 14-10-2018 DA442_07480 d5e378ae7ecfd1f2159545c7abcfce13 326 SUPERFAMILY SSF46785 20 102 1.77E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_07480 d5e378ae7ecfd1f2159545c7abcfce13 326 Pfam PF03466 LysR substrate binding domain 112 318 5.4E-15 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_07480 d5e378ae7ecfd1f2159545c7abcfce13 326 Gene3D G3DSA:3.40.190.10 106 313 9.6E-38 T 14-10-2018 DA442_07480 d5e378ae7ecfd1f2159545c7abcfce13 326 Gene3D G3DSA:3.40.190.10 191 289 9.6E-38 T 14-10-2018 DA442_25490 a1373415f57fcff6353c42fa9b6d179f 150 SUPERFAMILY SSF46785 53 146 7.93E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_25490 a1373415f57fcff6353c42fa9b6d179f 150 Pfam PF12840 Helix-turn-helix domain 61 122 4.2E-11 T 14-10-2018 DA442_25490 a1373415f57fcff6353c42fa9b6d179f 150 Gene3D G3DSA:1.10.10.10 49 150 1.1E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_25490 a1373415f57fcff6353c42fa9b6d179f 150 SMART SM00418 61 141 1.1E-5 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DA442_25490 a1373415f57fcff6353c42fa9b6d179f 150 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 63 78 4.0E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DA442_25490 a1373415f57fcff6353c42fa9b6d179f 150 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 98 113 4.0E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DA442_25490 a1373415f57fcff6353c42fa9b6d179f 150 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 113 128 4.0E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DA442_03950 c71cbf1a01dfb4b57b3994eccca25122 193 SUPERFAMILY SSF160443 93 175 3.27E-14 T 14-10-2018 IPR036063 Smr domain superfamily DA442_03950 c71cbf1a01dfb4b57b3994eccca25122 193 SMART SM00463 92 175 1.6E-15 T 14-10-2018 IPR002625 Smr domain DA442_03950 c71cbf1a01dfb4b57b3994eccca25122 193 Pfam PF01713 Smr domain 95 175 2.8E-21 T 14-10-2018 IPR002625 Smr domain DA442_03950 c71cbf1a01dfb4b57b3994eccca25122 193 Gene3D G3DSA:3.30.1370.110 47 181 2.2E-43 T 14-10-2018 DA442_00095 f58f12ba7c512bd12b8a0a186a3c77dc 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 DA442_00095 f58f12ba7c512bd12b8a0a186a3c77dc 391 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 5 391 60.711 T 14-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 DA442_00095 f58f12ba7c512bd12b8a0a186a3c77dc 391 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 7 391 2.1E-243 T 14-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 DA442_00095 f58f12ba7c512bd12b8a0a186a3c77dc 391 Gene3D G3DSA:3.40.47.10 8 271 2.7E-151 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DA442_00095 f58f12ba7c512bd12b8a0a186a3c77dc 391 SUPERFAMILY SSF53901 266 390 3.3E-44 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DA442_00095 f58f12ba7c512bd12b8a0a186a3c77dc 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 389 2.6E-142 T 14-10-2018 IPR002155 Thiolase GO:0016747 DA442_00095 f58f12ba7c512bd12b8a0a186a3c77dc 391 Gene3D G3DSA:3.40.47.10 138 385 2.7E-151 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DA442_00095 f58f12ba7c512bd12b8a0a186a3c77dc 391 Pfam PF02803 Thiolase, C-terminal domain 266 390 1.4E-49 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 DA442_00095 f58f12ba7c512bd12b8a0a186a3c77dc 391 SUPERFAMILY SSF53901 4 263 5.95E-79 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DA442_00095 f58f12ba7c512bd12b8a0a186a3c77dc 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 91 109 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 DA442_00095 f58f12ba7c512bd12b8a0a186a3c77dc 391 PIRSF PIRSF000429 2 391 6.1E-133 T 14-10-2018 IPR002155 Thiolase GO:0016747 DA442_00095 f58f12ba7c512bd12b8a0a186a3c77dc 391 Pfam PF00108 Thiolase, N-terminal domain 8 258 4.4E-84 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 DA442_00095 f58f12ba7c512bd12b8a0a186a3c77dc 391 ProSitePatterns PS00737 Thiolases signature 2. 337 353 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 DA442_12775 da02c1c0550bb7a17500eb84d83c6b3d 280 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 238 264 - T 14-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 DA442_12775 da02c1c0550bb7a17500eb84d83c6b3d 280 Pfam PF01148 Cytidylyltransferase family 2 280 2.6E-70 T 14-10-2018 DA442_03725 8629ee451199715959b0d0835ffb6794 857 SUPERFAMILY SSF52374 4 666 3.11E-147 T 14-10-2018 DA442_03725 8629ee451199715959b0d0835ffb6794 857 Gene3D G3DSA:3.10.20.590 796 856 1.2E-24 T 14-10-2018 DA442_03725 8629ee451199715959b0d0835ffb6794 857 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 2.8E-79 T 14-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 DA442_03725 8629ee451199715959b0d0835ffb6794 857 Gene3D G3DSA:3.40.50.620 33 564 0.0 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DA442_03725 8629ee451199715959b0d0835ffb6794 857 SUPERFAMILY SSF50677 226 414 1.36E-56 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DA442_03725 8629ee451199715959b0d0835ffb6794 857 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DA442_03725 8629ee451199715959b0d0835ffb6794 857 SUPERFAMILY SSF47323 660 856 1.12E-36 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DA442_03725 8629ee451199715959b0d0835ffb6794 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 7.2E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DA442_03725 8629ee451199715959b0d0835ffb6794 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 7.2E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DA442_03725 8629ee451199715959b0d0835ffb6794 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 484 502 7.2E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DA442_03725 8629ee451199715959b0d0835ffb6794 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 522 544 7.2E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DA442_03725 8629ee451199715959b0d0835ffb6794 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 555 565 7.2E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DA442_03725 8629ee451199715959b0d0835ffb6794 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 7.2E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DA442_03725 8629ee451199715959b0d0835ffb6794 857 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 7.2E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DA442_03725 8629ee451199715959b0d0835ffb6794 857 Gene3D G3DSA:1.10.730.10 8 788 0.0 T 14-10-2018 DA442_03725 8629ee451199715959b0d0835ffb6794 857 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 856 23.475 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DA442_03725 8629ee451199715959b0d0835ffb6794 857 Gene3D G3DSA:3.90.740.10 227 413 0.0 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DA442_03725 8629ee451199715959b0d0835ffb6794 857 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 856 0.0 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DA442_03725 8629ee451199715959b0d0835ffb6794 857 Pfam PF08264 Anticodon-binding domain of tRNA 699 820 2.0E-17 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 DA442_03725 8629ee451199715959b0d0835ffb6794 857 Gene3D G3DSA:3.10.330.110 565 626 0.0 T 14-10-2018 DA442_03725 8629ee451199715959b0d0835ffb6794 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 617 649 2.0E-7 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 DA442_03725 8629ee451199715959b0d0835ffb6794 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 417 570 1.5E-9 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 DA442_03725 8629ee451199715959b0d0835ffb6794 857 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 172 3.9E-26 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 DA442_01730 203a297866f120b24689c80a6161208b 145 Gene3D G3DSA:3.40.50.620 1 142 2.8E-36 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DA442_01730 203a297866f120b24689c80a6161208b 145 SUPERFAMILY SSF52402 2 143 1.93E-34 T 14-10-2018 DA442_01730 203a297866f120b24689c80a6161208b 145 PIRSF PIRSF006276 1 145 1.9E-18 T 14-10-2018 IPR006015 Universal stress protein A DA442_01730 203a297866f120b24689c80a6161208b 145 PRINTS PR01438 Universal stress protein signature 102 114 2.3E-11 T 14-10-2018 IPR006015 Universal stress protein A DA442_01730 203a297866f120b24689c80a6161208b 145 PRINTS PR01438 Universal stress protein signature 2 20 2.3E-11 T 14-10-2018 IPR006015 Universal stress protein A DA442_01730 203a297866f120b24689c80a6161208b 145 PRINTS PR01438 Universal stress protein signature 120 142 2.3E-11 T 14-10-2018 IPR006015 Universal stress protein A DA442_01730 203a297866f120b24689c80a6161208b 145 Pfam PF00582 Universal stress protein family 1 142 2.5E-32 T 14-10-2018 IPR006016 UspA DA442_11620 02b1f053570c1a4414f0fb4463ea2f68 202 Pfam PF02810 SEC-C motif 184 202 1.5E-9 T 14-10-2018 IPR004027 SEC-C motif DA442_11620 02b1f053570c1a4414f0fb4463ea2f68 202 Gene3D G3DSA:3.10.450.50 163 202 9.5E-9 T 14-10-2018 DA442_11620 02b1f053570c1a4414f0fb4463ea2f68 202 Pfam PF03695 Uncharacterised protein family (UPF0149) 20 154 5.4E-8 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 DA442_11620 02b1f053570c1a4414f0fb4463ea2f68 202 SUPERFAMILY SSF103642 182 201 2.13E-7 T 14-10-2018 DA442_20655 504d31f92c0ff5e5e9c9cebdaa478a1f 308 SMART SM00893 3 186 2.3E-33 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 DA442_20655 504d31f92c0ff5e5e9c9cebdaa478a1f 308 PIRSF PIRSF000089 1 308 1.3E-109 T 14-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 DA442_20655 504d31f92c0ff5e5e9c9cebdaa478a1f 308 Gene3D G3DSA:3.40.50.620 4 181 1.7E-47 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DA442_20655 504d31f92c0ff5e5e9c9cebdaa478a1f 308 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 189 271 6.2E-37 T 14-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 DA442_20655 504d31f92c0ff5e5e9c9cebdaa478a1f 308 SUPERFAMILY SSF52467 186 308 6.54E-49 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DA442_20655 504d31f92c0ff5e5e9c9cebdaa478a1f 308 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 252 278 - T 14-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 DA442_20655 504d31f92c0ff5e5e9c9cebdaa478a1f 308 Pfam PF01012 Electron transfer flavoprotein domain 4 176 6.1E-33 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 DA442_20655 504d31f92c0ff5e5e9c9cebdaa478a1f 308 Gene3D G3DSA:3.40.50.1220 183 308 1.5E-58 T 14-10-2018 DA442_20655 504d31f92c0ff5e5e9c9cebdaa478a1f 308 SUPERFAMILY SSF52402 4 181 1.67E-46 T 14-10-2018 DA442_02350 dea8a802f95fb4a76145d5351ed32d78 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DA442_02350 dea8a802f95fb4a76145d5351ed32d78 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 7.3E-157 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DA442_02350 dea8a802f95fb4a76145d5351ed32d78 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 9.3E-6 T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DA442_02350 dea8a802f95fb4a76145d5351ed32d78 360 Pfam PF00953 Glycosyl transferase family 4 99 283 2.4E-37 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 DA442_02350 dea8a802f95fb4a76145d5351ed32d78 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DA442_02350 dea8a802f95fb4a76145d5351ed32d78 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.429 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DA442_15320 f3201fcbb90efc7c7653d2e3738eb1b6 574 Pfam PF00437 Type II/IV secretion system protein 189 453 2.9E-77 T 14-10-2018 IPR001482 Type II/IV secretion system protein DA442_15320 f3201fcbb90efc7c7653d2e3738eb1b6 574 SUPERFAMILY SSF160246 3 145 4.18E-40 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily DA442_15320 f3201fcbb90efc7c7653d2e3738eb1b6 574 Gene3D G3DSA:3.40.50.300 290 565 9.0E-101 T 14-10-2018 DA442_15320 f3201fcbb90efc7c7653d2e3738eb1b6 574 SUPERFAMILY SSF52540 181 558 6.82E-92 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_15320 f3201fcbb90efc7c7653d2e3738eb1b6 574 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 381 395 - T 14-10-2018 IPR001482 Type II/IV secretion system protein DA442_15320 f3201fcbb90efc7c7653d2e3738eb1b6 574 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 42 148 1.0E-22 T 14-10-2018 IPR007831 General secretory system II, protein E, N-terminal DA442_15320 f3201fcbb90efc7c7653d2e3738eb1b6 574 Gene3D G3DSA:3.30.450.90 147 286 7.0E-44 T 14-10-2018 DA442_15320 f3201fcbb90efc7c7653d2e3738eb1b6 574 Gene3D G3DSA:3.30.300.160 63 145 1.2E-5 T 14-10-2018 DA442_15320 f3201fcbb90efc7c7653d2e3738eb1b6 574 SMART SM00382 314 435 5.3E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_03150 ab5fe74b96d5d71db1c1d316c63ad46b 316 Pfam PF13413 Helix-turn-helix domain 20 78 5.0E-19 T 14-10-2018 DA442_03150 ab5fe74b96d5d71db1c1d316c63ad46b 316 SMART SM00530 19 80 8.8E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DA442_03150 ab5fe74b96d5d71db1c1d316c63ad46b 316 Pfam PF13464 Domain of unknown function (DUF4115) 241 314 5.6E-26 T 14-10-2018 IPR025194 Domain of unknown function DUF4115 DA442_03150 ab5fe74b96d5d71db1c1d316c63ad46b 316 SUPERFAMILY SSF47413 14 79 4.79E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DA442_03150 ab5fe74b96d5d71db1c1d316c63ad46b 316 Gene3D G3DSA:1.10.260.40 7 116 2.3E-24 T 14-10-2018 DA442_01030 e4bb6030cdb6c1393052a1629f342086 56 SUPERFAMILY SSF57829 3 54 7.32E-19 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 DA442_01030 e4bb6030cdb6c1393052a1629f342086 56 Gene3D G3DSA:2.20.28.120 1 56 1.2E-28 T 14-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01030 e4bb6030cdb6c1393052a1629f342086 56 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 56 1.4E-26 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01030 e4bb6030cdb6c1393052a1629f342086 56 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 6 54 14.671 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01030 e4bb6030cdb6c1393052a1629f342086 56 ProSitePatterns PS00582 Ribosomal protein L33 signature. 22 41 - T 14-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_01030 e4bb6030cdb6c1393052a1629f342086 56 Pfam PF00471 Ribosomal protein L33 8 54 1.2E-16 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_11375 bce0b793b3c3290714a7577bcad9e3bc 93 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 92 2.8E-49 T 14-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 DA442_11375 bce0b793b3c3290714a7577bcad9e3bc 93 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 93 30.541 T 14-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 DA442_11375 bce0b793b3c3290714a7577bcad9e3bc 93 SUPERFAMILY SSF47729 1 91 2.5E-30 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DA442_11375 bce0b793b3c3290714a7577bcad9e3bc 93 SMART SM00411 1 91 4.4E-43 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DA442_11375 bce0b793b3c3290714a7577bcad9e3bc 93 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.2E-18 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DA442_11375 bce0b793b3c3290714a7577bcad9e3bc 93 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.2E-18 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DA442_11375 bce0b793b3c3290714a7577bcad9e3bc 93 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.2E-18 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DA442_11375 bce0b793b3c3290714a7577bcad9e3bc 93 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 DA442_11375 bce0b793b3c3290714a7577bcad9e3bc 93 Gene3D G3DSA:4.10.520.10 40 92 4.4E-29 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DA442_11375 bce0b793b3c3290714a7577bcad9e3bc 93 Gene3D G3DSA:4.10.520.10 2 39 5.3E-12 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DA442_11375 bce0b793b3c3290714a7577bcad9e3bc 93 Pfam PF00216 Bacterial DNA-binding protein 1 91 5.9E-31 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DA442_19860 2a51b1896609783de7e922b4bfaf029b 568 Gene3D G3DSA:3.30.1370.20 431 515 5.9E-39 T 14-10-2018 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 DA442_19860 2a51b1896609783de7e922b4bfaf029b 568 SUPERFAMILY SSF55103 270 561 3.71E-106 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 DA442_19860 2a51b1896609783de7e922b4bfaf029b 568 Gene3D G3DSA:3.30.43.10 1 96 3.3E-14 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 DA442_19860 2a51b1896609783de7e922b4bfaf029b 568 Pfam PF09330 D-lactate dehydrogenase, membrane binding 273 562 1.8E-136 T 14-10-2018 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 DA442_19860 2a51b1896609783de7e922b4bfaf029b 568 PIRSF PIRSF000101 1 566 6.2E-305 T 14-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 DA442_19860 2a51b1896609783de7e922b4bfaf029b 568 SUPERFAMILY SSF56176 4 268 1.04E-67 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DA442_19860 2a51b1896609783de7e922b4bfaf029b 568 Gene3D G3DSA:3.30.465.10 100 263 4.7E-72 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DA442_19860 2a51b1896609783de7e922b4bfaf029b 568 Hamap MF_02092 Quinone-dependent D-lactate dehydrogenase [dld]. 4 564 55.057 T 14-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 DA442_19860 2a51b1896609783de7e922b4bfaf029b 568 Gene3D G3DSA:3.30.70.610 368 430 1.9E-17 T 14-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 DA442_19860 2a51b1896609783de7e922b4bfaf029b 568 Gene3D G3DSA:3.30.70.610 264 345 1.6E-16 T 14-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 DA442_19860 2a51b1896609783de7e922b4bfaf029b 568 Pfam PF01565 FAD binding domain 41 160 1.6E-9 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 DA442_00530 d7c0dab6793acc69d74e480133c65d6e 253 Gene3D G3DSA:3.20.20.140 1 253 3.3E-79 T 14-10-2018 DA442_00530 d7c0dab6793acc69d74e480133c65d6e 253 Pfam PF01026 TatD related DNase 2 252 7.0E-64 T 14-10-2018 IPR001130 TatD family GO:0016788 DA442_00530 d7c0dab6793acc69d74e480133c65d6e 253 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 1 252 1.8E-70 T 14-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 DA442_00530 d7c0dab6793acc69d74e480133c65d6e 253 PIRSF PIRSF005902 1 253 4.7E-70 T 14-10-2018 IPR001130 TatD family GO:0016788 DA442_00530 d7c0dab6793acc69d74e480133c65d6e 253 SUPERFAMILY SSF51556 1 253 4.77E-80 T 14-10-2018 IPR032466 Metal-dependent hydrolase DA442_11705 a2169c80716657e0f6c0349d77b53d64 557 Gene3D G3DSA:3.40.190.10 57 539 7.8E-194 T 14-10-2018 DA442_11705 a2169c80716657e0f6c0349d77b53d64 557 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 99 477 7.8E-95 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain DA442_11705 a2169c80716657e0f6c0349d77b53d64 557 SUPERFAMILY SSF53850 55 545 4.34E-149 T 14-10-2018 DA442_11705 a2169c80716657e0f6c0349d77b53d64 557 Gene3D G3DSA:3.90.76.10 87 210 7.8E-194 T 14-10-2018 DA442_11705 a2169c80716657e0f6c0349d77b53d64 557 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 103 124 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site DA442_11705 a2169c80716657e0f6c0349d77b53d64 557 PIRSF PIRSF002741 4 557 2.8E-117 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DA442_11705 a2169c80716657e0f6c0349d77b53d64 557 Gene3D G3DSA:3.10.105.10 312 527 7.8E-194 T 14-10-2018 DA442_20900 dad0facc01f1df66458b99673b62ddb1 591 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 55 584 6.3E-249 T 14-10-2018 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 DA442_20900 dad0facc01f1df66458b99673b62ddb1 591 Gene3D G3DSA:3.40.50.1820 228 515 1.3E-8 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_20900 dad0facc01f1df66458b99673b62ddb1 591 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 95 266 1.5E-73 T 14-10-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 DA442_20900 dad0facc01f1df66458b99673b62ddb1 591 SUPERFAMILY SSF53474 225 527 3.73E-34 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_24815 2e49b7889de5b92fbe480990df0822a0 576 SUPERFAMILY SSF53850 146 572 1.61E-46 T 14-10-2018 DA442_24815 2e49b7889de5b92fbe480990df0822a0 576 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 190 334 9.8E-20 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain DA442_24815 2e49b7889de5b92fbe480990df0822a0 576 Gene3D G3DSA:3.40.190.10 136 396 3.4E-33 T 14-10-2018 DA442_24815 2e49b7889de5b92fbe480990df0822a0 576 Pfam PF12793 Sugar transport-related sRNA regulator N-term 36 133 1.3E-17 T 14-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain DA442_10920 43ea47a2e6f6f951c4f1bec8564cff6c 417 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 3 144 2.1E-32 T 14-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 DA442_10920 43ea47a2e6f6f951c4f1bec8564cff6c 417 SUPERFAMILY SSF51735 3 179 8.0E-16 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_10920 43ea47a2e6f6f951c4f1bec8564cff6c 417 Gene3D G3DSA:3.40.50.720 4 398 4.7E-144 T 14-10-2018 DA442_10920 43ea47a2e6f6f951c4f1bec8564cff6c 417 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 149 395 3.1E-30 T 14-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 DA442_10920 43ea47a2e6f6f951c4f1bec8564cff6c 417 Gene3D G3DSA:3.30.360.10 159 355 4.7E-144 T 14-10-2018 DA442_23095 80dc7041f81175a065c90deb5614a04c 463 Gene3D G3DSA:2.40.30.170 320 446 1.3E-10 T 14-10-2018 DA442_23095 80dc7041f81175a065c90deb5614a04c 463 SUPERFAMILY SSF56954 172 260 3.4E-5 T 14-10-2018 DA442_23095 80dc7041f81175a065c90deb5614a04c 463 Gene3D G3DSA:1.10.287.470 105 136 1.3E-7 T 14-10-2018 DA442_23095 80dc7041f81175a065c90deb5614a04c 463 SUPERFAMILY SSF111369 64 131 1.57E-6 T 14-10-2018 DA442_23095 80dc7041f81175a065c90deb5614a04c 463 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 31 463 2.2E-134 T 14-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 DA442_23095 80dc7041f81175a065c90deb5614a04c 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 428 443 8.1E-49 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DA442_23095 80dc7041f81175a065c90deb5614a04c 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 443 463 8.1E-49 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DA442_23095 80dc7041f81175a065c90deb5614a04c 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 40 63 8.1E-49 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DA442_23095 80dc7041f81175a065c90deb5614a04c 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 329 350 8.1E-49 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DA442_23095 80dc7041f81175a065c90deb5614a04c 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 386 409 8.1E-49 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DA442_23095 80dc7041f81175a065c90deb5614a04c 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 82 102 8.1E-49 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DA442_23095 80dc7041f81175a065c90deb5614a04c 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 362 386 8.1E-49 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DA442_23095 80dc7041f81175a065c90deb5614a04c 463 Gene3D G3DSA:1.20.1600.10 172 259 2.2E-6 T 14-10-2018 DA442_23095 80dc7041f81175a065c90deb5614a04c 463 Pfam PF13533 Biotin-lipoyl like 75 108 4.0E-7 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain DA442_23095 80dc7041f81175a065c90deb5614a04c 463 Gene3D G3DSA:2.40.50.100 69 104 1.3E-7 T 14-10-2018 DA442_23095 80dc7041f81175a065c90deb5614a04c 463 ProSitePatterns PS00543 HlyD family secretion proteins signature. 428 450 - T 14-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 DA442_23095 80dc7041f81175a065c90deb5614a04c 463 Pfam PF13437 HlyD family secretion protein 316 423 1.3E-17 T 14-10-2018 DA442_15715 824cf05326eb4126af8b8f4fbb294164 425 Gene3D G3DSA:3.40.50.10380 7 170 8.6E-67 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 DA442_15715 824cf05326eb4126af8b8f4fbb294164 425 ProSitePatterns PS00331 Malic enzymes signature. 169 185 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 DA442_15715 824cf05326eb4126af8b8f4fbb294164 425 SMART SM00919 173 409 1.0E-142 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 DA442_15715 824cf05326eb4126af8b8f4fbb294164 425 SUPERFAMILY SSF53223 20 171 2.45E-52 T 14-10-2018 DA442_15715 824cf05326eb4126af8b8f4fbb294164 425 PIRSF PIRSF000106 49 425 2.8E-72 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DA442_15715 824cf05326eb4126af8b8f4fbb294164 425 SUPERFAMILY SSF51735 173 420 5.12E-81 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_15715 824cf05326eb4126af8b8f4fbb294164 425 Pfam PF00390 Malic enzyme, N-terminal domain 31 160 7.4E-27 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 DA442_15715 824cf05326eb4126af8b8f4fbb294164 425 Pfam PF03949 Malic enzyme, NAD binding domain 175 365 2.3E-25 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 DA442_15715 824cf05326eb4126af8b8f4fbb294164 425 Gene3D G3DSA:3.40.50.720 171 425 2.5E-83 T 14-10-2018 DA442_15715 824cf05326eb4126af8b8f4fbb294164 425 SMART SM01274 28 161 6.0E-75 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 DA442_16745 06b29a1099abe5fbde7c35aba3d3093e 476 Gene3D G3DSA:3.50.50.60 168 286 1.1E-92 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_16745 06b29a1099abe5fbde7c35aba3d3093e 476 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 356 467 5.9E-30 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 DA442_16745 06b29a1099abe5fbde7c35aba3d3093e 476 SUPERFAMILY SSF55424 355 473 2.06E-30 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DA442_16745 06b29a1099abe5fbde7c35aba3d3093e 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 301 323 4.9E-28 T 14-10-2018 DA442_16745 06b29a1099abe5fbde7c35aba3d3093e 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 272 288 4.9E-28 T 14-10-2018 DA442_16745 06b29a1099abe5fbde7c35aba3d3093e 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 19 38 4.9E-28 T 14-10-2018 DA442_16745 06b29a1099abe5fbde7c35aba3d3093e 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 4.9E-28 T 14-10-2018 DA442_16745 06b29a1099abe5fbde7c35aba3d3093e 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 188 206 4.9E-28 T 14-10-2018 DA442_16745 06b29a1099abe5fbde7c35aba3d3093e 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 51 66 4.3E-52 T 14-10-2018 DA442_16745 06b29a1099abe5fbde7c35aba3d3093e 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 273 287 4.3E-52 T 14-10-2018 DA442_16745 06b29a1099abe5fbde7c35aba3d3093e 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 442 462 4.3E-52 T 14-10-2018 DA442_16745 06b29a1099abe5fbde7c35aba3d3093e 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 18 40 4.3E-52 T 14-10-2018 DA442_16745 06b29a1099abe5fbde7c35aba3d3093e 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 188 213 4.3E-52 T 14-10-2018 DA442_16745 06b29a1099abe5fbde7c35aba3d3093e 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 352 373 4.3E-52 T 14-10-2018 DA442_16745 06b29a1099abe5fbde7c35aba3d3093e 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 316 323 4.3E-52 T 14-10-2018 DA442_16745 06b29a1099abe5fbde7c35aba3d3093e 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 417 432 4.3E-52 T 14-10-2018 DA442_16745 06b29a1099abe5fbde7c35aba3d3093e 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 152 161 4.3E-52 T 14-10-2018 DA442_16745 06b29a1099abe5fbde7c35aba3d3093e 476 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 17 336 1.1E-58 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DA442_16745 06b29a1099abe5fbde7c35aba3d3093e 476 Gene3D G3DSA:3.50.50.60 17 343 1.1E-92 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_16745 06b29a1099abe5fbde7c35aba3d3093e 476 Gene3D G3DSA:3.30.390.30 355 474 7.9E-33 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DA442_16745 06b29a1099abe5fbde7c35aba3d3093e 476 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 12 476 65.489 T 14-10-2018 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 DA442_16745 06b29a1099abe5fbde7c35aba3d3093e 476 SUPERFAMILY SSF51905 15 329 1.02E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_16745 06b29a1099abe5fbde7c35aba3d3093e 476 PIRSF PIRSF000350 3 473 1.2E-69 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 DA442_25710 7efefdc8fdfc6065eb9b9ee6aec38fef 248 Gene3D G3DSA:3.20.20.140 3 247 7.1E-64 T 14-10-2018 DA442_25710 7efefdc8fdfc6065eb9b9ee6aec38fef 248 SUPERFAMILY SSF89550 4 244 4.84E-61 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 DA442_25710 7efefdc8fdfc6065eb9b9ee6aec38fef 248 SMART SM00481 5 79 1.2E-8 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal DA442_25710 7efefdc8fdfc6065eb9b9ee6aec38fef 248 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 2 245 52.405 T 14-10-2018 IPR023710 Probable phosphatase YcdX GO:0008270 DA442_01825 5228095df815efba4f1775dc9573701e 427 Gene3D G3DSA:1.10.4030.30 25 272 7.0E-69 T 14-10-2018 DA442_01825 5228095df815efba4f1775dc9573701e 427 SUPERFAMILY SSF54534 278 380 2.42E-29 T 14-10-2018 DA442_01825 5228095df815efba4f1775dc9573701e 427 Hamap MF_01183 Chaperone SurA [surA]. 8 423 31.976 T 14-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 DA442_01825 5228095df815efba4f1775dc9573701e 427 Gene3D G3DSA:3.10.50.40 275 415 4.8E-39 T 14-10-2018 DA442_01825 5228095df815efba4f1775dc9573701e 427 SUPERFAMILY SSF109998 24 196 1.7E-38 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily DA442_01825 5228095df815efba4f1775dc9573701e 427 Gene3D G3DSA:3.10.50.40 171 270 7.0E-69 T 14-10-2018 DA442_01825 5228095df815efba4f1775dc9573701e 427 Pfam PF13616 PPIC-type PPIASE domain 163 269 1.0E-20 T 14-10-2018 DA442_01825 5228095df815efba4f1775dc9573701e 427 Pfam PF13616 PPIC-type PPIASE domain 276 378 1.3E-23 T 14-10-2018 DA442_01825 5228095df815efba4f1775dc9573701e 427 SUPERFAMILY SSF54534 172 270 1.96E-24 T 14-10-2018 DA442_01825 5228095df815efba4f1775dc9573701e 427 Pfam PF09312 SurA N-terminal domain 24 141 2.0E-43 T 14-10-2018 IPR015391 SurA N-terminal DA442_10915 0af0e8d4134a7bfe1ec511943d40a74b 377 Gene3D G3DSA:3.20.20.10 15 242 5.3E-141 T 14-10-2018 IPR029066 PLP-binding barrel DA442_10915 0af0e8d4134a7bfe1ec511943d40a74b 377 SUPERFAMILY SSF50621 212 359 1.09E-22 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DA442_10915 0af0e8d4134a7bfe1ec511943d40a74b 377 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 6 370 3.4E-162 T 14-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 DA442_10915 0af0e8d4134a7bfe1ec511943d40a74b 377 PIRSF PIRSF038941 1 372 4.8E-126 T 14-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 DA442_10915 0af0e8d4134a7bfe1ec511943d40a74b 377 Gene3D G3DSA:2.40.37.10 7 372 5.3E-141 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DA442_10915 0af0e8d4134a7bfe1ec511943d40a74b 377 SUPERFAMILY SSF51419 14 242 5.23E-42 T 14-10-2018 IPR029066 PLP-binding barrel DA442_24995 7b33b3489c9968fe874e962ac02ddd6f 360 Pfam PF13343 Bacterial extracellular solute-binding protein 97 325 6.2E-35 T 14-10-2018 DA442_24995 7b33b3489c9968fe874e962ac02ddd6f 360 Gene3D G3DSA:3.40.190.10 72 323 1.1E-35 T 14-10-2018 DA442_24995 7b33b3489c9968fe874e962ac02ddd6f 360 SUPERFAMILY SSF53850 51 353 6.52E-48 T 14-10-2018 DA442_24995 7b33b3489c9968fe874e962ac02ddd6f 360 Gene3D G3DSA:3.40.190.10 146 329 1.1E-35 T 14-10-2018 DA442_08880 2126f4611fd38bf0738dbaeb42389468 286 SUPERFAMILY SSF51215 32 103 4.84E-5 T 14-10-2018 IPR037923 Transcription regulator HTH-like DA442_08880 2126f4611fd38bf0738dbaeb42389468 286 Gene3D G3DSA:1.10.10.60 173 284 6.5E-30 T 14-10-2018 DA442_08880 2126f4611fd38bf0738dbaeb42389468 286 SMART SM00342 193 276 4.0E-31 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_08880 2126f4611fd38bf0738dbaeb42389468 286 SUPERFAMILY SSF46689 179 226 2.87E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_08880 2126f4611fd38bf0738dbaeb42389468 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 260 5.9E-8 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DA442_08880 2126f4611fd38bf0738dbaeb42389468 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 260 276 5.9E-8 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DA442_08880 2126f4611fd38bf0738dbaeb42389468 286 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 230 272 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DA442_08880 2126f4611fd38bf0738dbaeb42389468 286 SUPERFAMILY SSF46689 229 277 5.82E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_08880 2126f4611fd38bf0738dbaeb42389468 286 Pfam PF12833 Helix-turn-helix domain 199 276 3.0E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_04255 b3e15b9916669286129ec98c69061fe2 305 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 296 1.5E-103 T 14-10-2018 IPR010099 Epimerase family protein SDR39U1 DA442_04255 b3e15b9916669286129ec98c69061fe2 305 SUPERFAMILY SSF51735 1 300 2.65E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_04255 b3e15b9916669286129ec98c69061fe2 305 Pfam PF08338 Domain of unknown function (DUF1731) 253 299 2.3E-15 T 14-10-2018 IPR013549 Domain of unknown function DUF1731 DA442_04255 b3e15b9916669286129ec98c69061fe2 305 Gene3D G3DSA:3.40.50.720 2 304 1.0E-76 T 14-10-2018 DA442_04255 b3e15b9916669286129ec98c69061fe2 305 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 225 7.7E-23 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DA442_08580 e86b975eb61c3860c8402df7d9f75140 222 Gene3D G3DSA:3.20.20.70 1 222 1.8E-53 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_08580 e86b975eb61c3860c8402df7d9f75140 222 SUPERFAMILY SSF102114 27 121 1.15E-6 T 14-10-2018 DA442_08580 e86b975eb61c3860c8402df7d9f75140 222 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 8 221 4.6E-112 T 14-10-2018 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 DA442_08580 e86b975eb61c3860c8402df7d9f75140 222 PIRSF PIRSF000370 1 222 1.1E-71 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 DA442_08580 e86b975eb61c3860c8402df7d9f75140 222 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 2 222 34.52 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 DA442_08580 e86b975eb61c3860c8402df7d9f75140 222 Pfam PF13394 4Fe-4S single cluster domain 23 130 2.0E-11 T 14-10-2018 DA442_03475 c58a28f2f5d319cc1243e233fe7c7352 416 Gene3D G3DSA:3.40.309.10 223 373 2.7E-149 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DA442_03475 c58a28f2f5d319cc1243e233fe7c7352 416 Gene3D G3DSA:3.40.605.10 15 408 2.7E-149 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DA442_03475 c58a28f2f5d319cc1243e233fe7c7352 416 SUPERFAMILY SSF53720 3 408 8.77E-109 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DA442_03475 c58a28f2f5d319cc1243e233fe7c7352 416 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 10 405 5.4E-165 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DA442_03475 c58a28f2f5d319cc1243e233fe7c7352 416 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 2 415 38.96 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DA442_03475 c58a28f2f5d319cc1243e233fe7c7352 416 Pfam PF00171 Aldehyde dehydrogenase family 5 280 4.1E-15 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DA442_03475 c58a28f2f5d319cc1243e233fe7c7352 416 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 322 343 - T 14-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DA442_03475 c58a28f2f5d319cc1243e233fe7c7352 416 PIRSF PIRSF000151 1 416 3.9E-163 T 14-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 DA442_06660 9e0b41c1130d1e81eaefe6745f43b528 295 PIRSF PIRSF006334 14 295 8.6E-110 T 14-10-2018 DA442_06660 9e0b41c1130d1e81eaefe6745f43b528 295 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 29 292 4.5E-99 T 14-10-2018 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 DA442_06660 9e0b41c1130d1e81eaefe6745f43b528 295 Hamap MF_01558 Cytidine deaminase [cdd]. 1 293 49.888 T 14-10-2018 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 DA442_06660 9e0b41c1130d1e81eaefe6745f43b528 295 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 DA442_06660 9e0b41c1130d1e81eaefe6745f43b528 295 Gene3D G3DSA:3.40.140.10 180 295 3.4E-27 T 14-10-2018 DA442_06660 9e0b41c1130d1e81eaefe6745f43b528 295 SUPERFAMILY SSF53927 152 287 2.8E-38 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 DA442_06660 9e0b41c1130d1e81eaefe6745f43b528 295 Gene3D G3DSA:3.40.140.10 29 179 1.0E-43 T 14-10-2018 DA442_06660 9e0b41c1130d1e81eaefe6745f43b528 295 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 277 1.2E-41 T 14-10-2018 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 DA442_06660 9e0b41c1130d1e81eaefe6745f43b528 295 SUPERFAMILY SSF53927 1 146 1.02E-40 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 DA442_06660 9e0b41c1130d1e81eaefe6745f43b528 295 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 60 142 5.0E-12 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain DA442_03110 becdfad9054859a54f7b330687cfebee 171 SUPERFAMILY SSF46565 1 72 1.83E-16 T 14-10-2018 IPR036869 Chaperone J-domain superfamily DA442_03110 becdfad9054859a54f7b330687cfebee 171 Gene3D G3DSA:1.20.1280.20 80 171 2.1E-28 T 14-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DA442_03110 becdfad9054859a54f7b330687cfebee 171 Pfam PF00226 DnaJ domain 2 70 1.2E-6 T 14-10-2018 IPR001623 DnaJ domain DA442_03110 becdfad9054859a54f7b330687cfebee 171 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 170 25.004 T 14-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DA442_03110 becdfad9054859a54f7b330687cfebee 171 Pfam PF07743 HSCB C-terminal oligomerisation domain 87 163 4.8E-19 T 14-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DA442_03110 becdfad9054859a54f7b330687cfebee 171 SUPERFAMILY SSF47144 78 170 7.06E-25 T 14-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DA442_03110 becdfad9054859a54f7b330687cfebee 171 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 169 4.4E-41 T 14-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DA442_03110 becdfad9054859a54f7b330687cfebee 171 SMART SM00271 1 66 4.2E-8 T 14-10-2018 IPR001623 DnaJ domain DA442_03110 becdfad9054859a54f7b330687cfebee 171 Gene3D G3DSA:1.10.287.110 1 79 1.7E-22 T 14-10-2018 IPR036869 Chaperone J-domain superfamily DA442_03120 0f972e050c4e96ab8f77ec61e305e70c 112 PRINTS PR00355 Adrenodoxin signature 42 52 3.2E-10 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 DA442_03120 0f972e050c4e96ab8f77ec61e305e70c 112 PRINTS PR00355 Adrenodoxin signature 83 91 3.2E-10 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 DA442_03120 0f972e050c4e96ab8f77ec61e305e70c 112 PRINTS PR00355 Adrenodoxin signature 60 74 3.2E-10 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 DA442_03120 0f972e050c4e96ab8f77ec61e305e70c 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 91 4.6E-15 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DA442_03120 0f972e050c4e96ab8f77ec61e305e70c 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 14-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 DA442_03120 0f972e050c4e96ab8f77ec61e305e70c 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 110 2.5E-61 T 14-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 DA442_03120 0f972e050c4e96ab8f77ec61e305e70c 112 Gene3D G3DSA:3.10.20.30 1 112 1.0E-36 T 14-10-2018 IPR012675 Beta-grasp domain superfamily DA442_03120 0f972e050c4e96ab8f77ec61e305e70c 112 SUPERFAMILY SSF54292 5 107 2.22E-32 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DA442_12370 19d6e4cea219ab53362db6c43788694c 503 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 2 378 7.2E-86 T 14-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 DA442_12370 19d6e4cea219ab53362db6c43788694c 503 Gene3D G3DSA:3.40.50.300 285 471 1.6E-57 T 14-10-2018 DA442_12370 19d6e4cea219ab53362db6c43788694c 503 SUPERFAMILY SSF52540 286 477 1.38E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_12370 19d6e4cea219ab53362db6c43788694c 503 Gene3D G3DSA:1.20.120.1380 264 474 1.6E-57 T 14-10-2018 DA442_12370 19d6e4cea219ab53362db6c43788694c 503 SMART SM00962 290 483 1.3E-63 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DA442_12370 19d6e4cea219ab53362db6c43788694c 503 SMART SM00382 289 442 7.2E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_12370 19d6e4cea219ab53362db6c43788694c 503 Pfam PF00448 SRP54-type protein, GTPase domain 292 479 2.9E-38 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DA442_03080 71691356ad3829fdbd4ca21926c02b22 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 14-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 DA442_03080 71691356ad3829fdbd4ca21926c02b22 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 1.5E-59 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DA442_03080 71691356ad3829fdbd4ca21926c02b22 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 1.5E-59 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DA442_03080 71691356ad3829fdbd4ca21926c02b22 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 1.5E-59 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DA442_03080 71691356ad3829fdbd4ca21926c02b22 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 1.5E-59 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DA442_03080 71691356ad3829fdbd4ca21926c02b22 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 1.5E-59 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DA442_03080 71691356ad3829fdbd4ca21926c02b22 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 1.5E-59 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DA442_03080 71691356ad3829fdbd4ca21926c02b22 267 Gene3D G3DSA:3.30.540.10 1 140 8.6E-50 T 14-10-2018 DA442_03080 71691356ad3829fdbd4ca21926c02b22 267 Gene3D G3DSA:3.40.190.80 144 266 3.1E-38 T 14-10-2018 DA442_03080 71691356ad3829fdbd4ca21926c02b22 267 Pfam PF00459 Inositol monophosphatase family 2 254 4.0E-69 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DA442_03080 71691356ad3829fdbd4ca21926c02b22 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site DA442_03080 71691356ad3829fdbd4ca21926c02b22 267 SUPERFAMILY SSF56655 1 259 1.2E-83 T 14-10-2018 DA442_03080 71691356ad3829fdbd4ca21926c02b22 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 1.7E-35 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 DA442_03080 71691356ad3829fdbd4ca21926c02b22 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 1.7E-35 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 DA442_03080 71691356ad3829fdbd4ca21926c02b22 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 1.7E-35 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 DA442_03080 71691356ad3829fdbd4ca21926c02b22 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 1.7E-35 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 DA442_05030 9a3968f61ca2ba279187d13062a5f048 768 SUPERFAMILY SSF81665 215 745 5.62E-20 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 DA442_05030 9a3968f61ca2ba279187d13062a5f048 768 ProSitePatterns PS01047 Heavy-metal-associated domain. 77 106 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 DA442_05030 9a3968f61ca2ba279187d13062a5f048 768 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 212 522 7.4E-97 T 14-10-2018 DA442_05030 9a3968f61ca2ba279187d13062a5f048 768 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 235 736 7.3E-86 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DA442_05030 9a3968f61ca2ba279187d13062a5f048 768 Gene3D G3DSA:3.30.70.100 72 137 7.3E-12 T 14-10-2018 DA442_05030 9a3968f61ca2ba279187d13062a5f048 768 Pfam PF00702 haloacid dehalogenase-like hydrolase 461 669 1.3E-38 T 14-10-2018 DA442_05030 9a3968f61ca2ba279187d13062a5f048 768 Pfam PF00403 Heavy-metal-associated domain 77 126 4.5E-11 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 DA442_05030 9a3968f61ca2ba279187d13062a5f048 768 Pfam PF00122 E1-E2 ATPase 263 443 4.0E-50 T 14-10-2018 DA442_05030 9a3968f61ca2ba279187d13062a5f048 768 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 212 759 2.0E-175 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DA442_05030 9a3968f61ca2ba279187d13062a5f048 768 SUPERFAMILY SSF56784 462 757 1.15E-50 T 14-10-2018 IPR036412 HAD-like superfamily DA442_05030 9a3968f61ca2ba279187d13062a5f048 768 SUPERFAMILY SSF81653 265 362 4.97E-22 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 DA442_05030 9a3968f61ca2ba279187d13062a5f048 768 SUPERFAMILY SSF55008 74 137 6.41E-13 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 DA442_05030 9a3968f61ca2ba279187d13062a5f048 768 Gene3D G3DSA:3.40.50.1000 444 709 7.6E-83 T 14-10-2018 IPR023214 HAD superfamily DA442_05030 9a3968f61ca2ba279187d13062a5f048 768 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 465 471 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 DA442_05030 9a3968f61ca2ba279187d13062a5f048 768 Gene3D G3DSA:2.70.150.20 262 367 1.3E-31 T 14-10-2018 DA442_05030 9a3968f61ca2ba279187d13062a5f048 768 Gene3D G3DSA:3.40.1110.10 474 591 7.6E-83 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DA442_05030 9a3968f61ca2ba279187d13062a5f048 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 606 616 3.2E-27 T 14-10-2018 DA442_05030 9a3968f61ca2ba279187d13062a5f048 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 463 477 3.2E-27 T 14-10-2018 DA442_05030 9a3968f61ca2ba279187d13062a5f048 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 584 595 3.2E-27 T 14-10-2018 DA442_05030 9a3968f61ca2ba279187d13062a5f048 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 657 676 3.2E-27 T 14-10-2018 DA442_05030 9a3968f61ca2ba279187d13062a5f048 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 312 326 3.2E-27 T 14-10-2018 DA442_05030 9a3968f61ca2ba279187d13062a5f048 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 680 692 3.2E-27 T 14-10-2018 DA442_05030 9a3968f61ca2ba279187d13062a5f048 768 PRINTS PR00941 Cadmium-transporting ATPase signature 86 107 6.7E-8 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DA442_05030 9a3968f61ca2ba279187d13062a5f048 768 PRINTS PR00941 Cadmium-transporting ATPase signature 347 361 6.7E-8 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DA442_05030 9a3968f61ca2ba279187d13062a5f048 768 PRINTS PR00941 Cadmium-transporting ATPase signature 247 267 6.7E-8 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DA442_20480 bdb1696f7b8901fbe06871e42f49c1a3 128 SUPERFAMILY SSF46955 4 117 2.97E-26 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DA442_20480 bdb1696f7b8901fbe06871e42f49c1a3 128 Gene3D G3DSA:1.10.1660.10 1 123 9.9E-28 T 14-10-2018 DA442_20480 bdb1696f7b8901fbe06871e42f49c1a3 128 Pfam PF09278 MerR, DNA binding 47 110 6.0E-17 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding DA442_20480 bdb1696f7b8901fbe06871e42f49c1a3 128 Pfam PF00376 MerR family regulatory protein 5 40 7.1E-11 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DA442_20480 bdb1696f7b8901fbe06871e42f49c1a3 128 SMART SM00422 4 71 1.5E-21 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DA442_13175 e85b8ae1a431f3285a019ffd56555e6a 263 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 DA442_13175 e85b8ae1a431f3285a019ffd56555e6a 263 SUPERFAMILY SSF100950 74 234 5.39E-29 T 14-10-2018 IPR037171 NagB/RpiA transferase-like DA442_13175 e85b8ae1a431f3285a019ffd56555e6a 263 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.7E-12 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DA442_13175 e85b8ae1a431f3285a019ffd56555e6a 263 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.7E-12 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DA442_13175 e85b8ae1a431f3285a019ffd56555e6a 263 Gene3D G3DSA:1.10.10.10 1 67 1.9E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_13175 e85b8ae1a431f3285a019ffd56555e6a 263 SUPERFAMILY SSF46785 5 77 4.94E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_13175 e85b8ae1a431f3285a019ffd56555e6a 263 SMART SM00420 6 58 1.2E-27 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DA442_13175 e85b8ae1a431f3285a019ffd56555e6a 263 Pfam PF00455 DeoR C terminal sensor domain 74 232 3.8E-50 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain DA442_13175 e85b8ae1a431f3285a019ffd56555e6a 263 Gene3D G3DSA:3.30.750.70 71 130 4.9E-8 T 14-10-2018 DA442_13175 e85b8ae1a431f3285a019ffd56555e6a 263 SMART SM01134 72 234 8.8E-68 T 14-10-2018 DA442_13175 e85b8ae1a431f3285a019ffd56555e6a 263 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 6.6E-24 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DA442_24315 30026e5d0516ad62c5dfca9baeb05a51 179 Pfam PF00293 NUDIX domain 44 153 5.7E-6 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DA442_24315 30026e5d0516ad62c5dfca9baeb05a51 179 SUPERFAMILY SSF55811 4 176 4.33E-37 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DA442_24315 30026e5d0516ad62c5dfca9baeb05a51 179 Gene3D G3DSA:3.90.79.10 2 177 9.4E-41 T 14-10-2018 DA442_15485 4478938a0bcaf49f132e3aeb4c469a0b 578 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 437 564 5.3E-5 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DA442_15485 4478938a0bcaf49f132e3aeb4c469a0b 578 Gene3D G3DSA:3.30.413.10 146 354 5.2E-82 T 14-10-2018 DA442_15485 4478938a0bcaf49f132e3aeb4c469a0b 578 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 24 566 1.1E-286 T 14-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DA442_15485 4478938a0bcaf49f132e3aeb4c469a0b 578 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 359 423 7.9E-14 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DA442_15485 4478938a0bcaf49f132e3aeb4c469a0b 578 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 84 142 2.8E-13 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DA442_15485 4478938a0bcaf49f132e3aeb4c469a0b 578 SUPERFAMILY SSF56014 435 566 4.45E-32 T 14-10-2018 DA442_15485 4478938a0bcaf49f132e3aeb4c469a0b 578 PRINTS PR00397 Sirohaem Fe-binding site signature 485 503 4.7E-9 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DA442_15485 4478938a0bcaf49f132e3aeb4c469a0b 578 PRINTS PR00397 Sirohaem Fe-binding site signature 436 454 4.7E-9 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DA442_15485 4478938a0bcaf49f132e3aeb4c469a0b 578 SUPERFAMILY SSF55124 352 430 2.13E-21 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DA442_15485 4478938a0bcaf49f132e3aeb4c469a0b 578 SUPERFAMILY SSF55124 18 150 2.78E-27 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DA442_15485 4478938a0bcaf49f132e3aeb4c469a0b 578 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 15 578 58.514 T 14-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DA442_15485 4478938a0bcaf49f132e3aeb4c469a0b 578 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 485 501 - T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DA442_15485 4478938a0bcaf49f132e3aeb4c469a0b 578 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 178 336 1.6E-45 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DA442_15485 4478938a0bcaf49f132e3aeb4c469a0b 578 Gene3D G3DSA:3.30.413.10 432 575 1.7E-35 T 14-10-2018 DA442_15485 4478938a0bcaf49f132e3aeb4c469a0b 578 Gene3D G3DSA:3.90.480.20 21 423 5.2E-82 T 14-10-2018 DA442_15485 4478938a0bcaf49f132e3aeb4c469a0b 578 SUPERFAMILY SSF56014 154 350 4.45E-58 T 14-10-2018 DA442_11765 f2ec17442c762b2f51622e73c67ca2b6 192 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 1.5E-61 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 DA442_11765 f2ec17442c762b2f51622e73c67ca2b6 192 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 1.7E-89 T 14-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 DA442_11765 f2ec17442c762b2f51622e73c67ca2b6 192 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 26.24 T 14-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 DA442_11765 f2ec17442c762b2f51622e73c67ca2b6 192 PIRSF PIRSF006102 1 192 9.6E-65 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 DA442_19925 acc90360583197cba3d2f04b0257d20e 374 Pfam PF07690 Major Facilitator Superfamily 19 339 8.4E-41 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DA442_19925 acc90360583197cba3d2f04b0257d20e 374 Gene3D G3DSA:1.20.1720.10 7 372 8.7E-71 T 14-10-2018 DA442_19925 acc90360583197cba3d2f04b0257d20e 374 PRINTS PR01035 Tetracycline resistance protein signature 127 149 1.8E-7 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DA442_19925 acc90360583197cba3d2f04b0257d20e 374 PRINTS PR01035 Tetracycline resistance protein signature 4 20 1.8E-7 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DA442_19925 acc90360583197cba3d2f04b0257d20e 374 PRINTS PR01035 Tetracycline resistance protein signature 294 314 1.8E-7 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DA442_19925 acc90360583197cba3d2f04b0257d20e 374 SUPERFAMILY SSF103473 7 363 1.03E-48 T 14-10-2018 IPR036259 MFS transporter superfamily DA442_25265 2a2df916ddb17e5d5f222515cbd8bcde 342 ProSitePatterns PS00483 Dihydroorotase signature 2. 244 255 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DA442_25265 2a2df916ddb17e5d5f222515cbd8bcde 342 ProSitePatterns PS00482 Dihydroorotase signature 1. 11 19 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DA442_25265 2a2df916ddb17e5d5f222515cbd8bcde 342 Pfam PF01979 Amidohydrolase family 11 315 3.3E-19 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DA442_25265 2a2df916ddb17e5d5f222515cbd8bcde 342 Gene3D G3DSA:3.20.20.140 2 342 1.0E-111 T 14-10-2018 DA442_25265 2a2df916ddb17e5d5f222515cbd8bcde 342 PIRSF PIRSF001237 1 342 8.2E-143 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DA442_25265 2a2df916ddb17e5d5f222515cbd8bcde 342 SUPERFAMILY SSF51556 1 342 1.18E-146 T 14-10-2018 IPR032466 Metal-dependent hydrolase DA442_25265 2a2df916ddb17e5d5f222515cbd8bcde 342 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 4 342 2.3E-138 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DA442_25265 2a2df916ddb17e5d5f222515cbd8bcde 342 Hamap MF_00219 Dihydroorotase [pyrC]. 2 342 46.674 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DA442_00965 bf476a6a079a74b7d1477f847c32eddb 286 PIRSF PIRSF000398 1 276 3.9E-57 T 14-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 DA442_00965 bf476a6a079a74b7d1477f847c32eddb 286 SUPERFAMILY SSF53335 4 271 2.33E-43 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_00965 bf476a6a079a74b7d1477f847c32eddb 286 Gene3D G3DSA:3.40.50.150 8 245 3.2E-31 T 14-10-2018 DA442_00965 bf476a6a079a74b7d1477f847c32eddb 286 Gene3D G3DSA:1.10.1020.10 65 164 3.2E-31 T 14-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 DA442_00965 bf476a6a079a74b7d1477f847c32eddb 286 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 245 1.4E-15 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DA442_02405 3ab4e0a97829270769d5d2ec48000d47 132 TIGRFAM TIGR00586 mutt: mutator mutT protein 1 127 1.1E-43 T 14-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 DA442_02405 3ab4e0a97829270769d5d2ec48000d47 132 PRINTS PR00502 NUDIX hydrolase family signature 48 63 6.0E-10 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DA442_02405 3ab4e0a97829270769d5d2ec48000d47 132 PRINTS PR00502 NUDIX hydrolase family signature 34 48 6.0E-10 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DA442_02405 3ab4e0a97829270769d5d2ec48000d47 132 Gene3D G3DSA:3.90.79.10 1 132 6.8E-41 T 14-10-2018 DA442_02405 3ab4e0a97829270769d5d2ec48000d47 132 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DA442_02405 3ab4e0a97829270769d5d2ec48000d47 132 Pfam PF00293 NUDIX domain 7 125 7.0E-21 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DA442_02405 3ab4e0a97829270769d5d2ec48000d47 132 SUPERFAMILY SSF55811 1 127 1.22E-34 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DA442_11565 ca299d4fdaf1d89d6f2ee697b7e026ba 519 Pfam PF00916 Sulfate permease family 13 374 2.1E-57 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 DA442_11565 ca299d4fdaf1d89d6f2ee697b7e026ba 519 SUPERFAMILY SSF52091 416 498 2.35E-11 T 14-10-2018 IPR036513 STAS domain superfamily DA442_11565 ca299d4fdaf1d89d6f2ee697b7e026ba 519 Gene3D G3DSA:3.30.750.24 409 499 3.9E-26 T 14-10-2018 IPR036513 STAS domain superfamily DA442_11565 ca299d4fdaf1d89d6f2ee697b7e026ba 519 Pfam PF01740 STAS domain 417 503 2.6E-6 T 14-10-2018 IPR002645 STAS domain DA442_05140 4398a3a92cecffc062ca2fc58823e503 582 Gene3D G3DSA:1.20.1560.10 2 328 8.0E-83 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DA442_05140 4398a3a92cecffc062ca2fc58823e503 582 SUPERFAMILY SSF90123 14 327 8.11E-76 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DA442_05140 4398a3a92cecffc062ca2fc58823e503 582 SMART SM00382 368 555 4.9E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_05140 4398a3a92cecffc062ca2fc58823e503 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 582 1.7E-239 T 14-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 DA442_05140 4398a3a92cecffc062ca2fc58823e503 582 Pfam PF00005 ABC transporter 359 509 2.3E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_05140 4398a3a92cecffc062ca2fc58823e503 582 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_05140 4398a3a92cecffc062ca2fc58823e503 582 Gene3D G3DSA:3.40.50.300 329 581 8.1E-96 T 14-10-2018 DA442_05140 4398a3a92cecffc062ca2fc58823e503 582 Pfam PF00664 ABC transporter transmembrane region 27 293 1.4E-56 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DA442_05140 4398a3a92cecffc062ca2fc58823e503 582 SUPERFAMILY SSF52540 331 580 3.45E-93 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_06770 ac062739206986fe202f99bac2353385 238 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 104 111 - T 14-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 DA442_06770 ac062739206986fe202f99bac2353385 238 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 3 228 3.1E-43 T 14-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 DA442_06770 ac062739206986fe202f99bac2353385 238 Gene3D G3DSA:3.90.550.10 1 236 2.5E-65 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DA442_06770 ac062739206986fe202f99bac2353385 238 Hamap MF_02068 Ribitol-5-phosphate cytidylyltransferase [tarI]. 1 231 43.533 T 14-10-2018 IPR034709 Ribitol-5-phosphate cytidylyltransferase GO:0047349 KEGG: 00040+2.7.7.40|KEGG: 00515+2.7.7.40|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7818|MetaCyc: PWY-7981 DA442_06770 ac062739206986fe202f99bac2353385 238 SUPERFAMILY SSF53448 2 228 2.38E-47 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DA442_19135 b8d869eec27e1fc2e44a38dc8dacc334 483 SMART SM00116 418 465 8.7 T 14-10-2018 IPR000644 CBS domain DA442_19135 b8d869eec27e1fc2e44a38dc8dacc334 483 SMART SM00116 320 368 5.6E-4 T 14-10-2018 IPR000644 CBS domain DA442_19135 b8d869eec27e1fc2e44a38dc8dacc334 483 Gene3D G3DSA:1.20.1080.10 4 270 6.2E-86 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 DA442_19135 b8d869eec27e1fc2e44a38dc8dacc334 483 Gene3D G3DSA:3.10.580.10 309 467 7.4E-23 T 14-10-2018 DA442_19135 b8d869eec27e1fc2e44a38dc8dacc334 483 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 170 180 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site DA442_19135 b8d869eec27e1fc2e44a38dc8dacc334 483 SUPERFAMILY SSF54631 311 464 1.87E-21 T 14-10-2018 DA442_19135 b8d869eec27e1fc2e44a38dc8dacc334 483 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 16 281 2.3E-112 T 14-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 DA442_19135 b8d869eec27e1fc2e44a38dc8dacc334 483 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 85 94 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site DA442_19135 b8d869eec27e1fc2e44a38dc8dacc334 483 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 29 281 1.6E-74 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 DA442_19135 b8d869eec27e1fc2e44a38dc8dacc334 483 Pfam PF00571 CBS domain 313 365 1.1E-9 T 14-10-2018 IPR000644 CBS domain DA442_19135 b8d869eec27e1fc2e44a38dc8dacc334 483 Pfam PF00571 CBS domain 382 464 0.0036 T 14-10-2018 IPR000644 CBS domain DA442_19135 b8d869eec27e1fc2e44a38dc8dacc334 483 Pfam PF01226 Formate/nitrite transporter 17 277 7.8E-70 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 DA442_20775 e5e13bda6497bd5b006e4ee492b1487d 316 SUPERFAMILY SSF51569 1 315 7.12E-114 T 14-10-2018 DA442_20775 e5e13bda6497bd5b006e4ee492b1487d 316 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 DA442_20775 e5e13bda6497bd5b006e4ee492b1487d 316 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 DA442_20775 e5e13bda6497bd5b006e4ee492b1487d 316 Hamap MF_00492 Transaldolase [tal]. 2 316 50.911 T 14-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 DA442_20775 e5e13bda6497bd5b006e4ee492b1487d 316 TIGRFAM TIGR00874 talAB: transaldolase 3 316 9.9E-155 T 14-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 DA442_20775 e5e13bda6497bd5b006e4ee492b1487d 316 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 312 3.7E-101 T 14-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 DA442_20775 e5e13bda6497bd5b006e4ee492b1487d 316 Gene3D G3DSA:3.20.20.70 2 316 1.2E-138 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_07690 251634ab3cff5fba5252676536ef2600 396 Gene3D G3DSA:3.40.50.1970 14 200 3.3E-52 T 14-10-2018 DA442_07690 251634ab3cff5fba5252676536ef2600 396 Pfam PF00465 Iron-containing alcohol dehydrogenase 27 385 1.5E-107 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 DA442_07690 251634ab3cff5fba5252676536ef2600 396 Gene3D G3DSA:1.20.1090.10 201 393 3.0E-54 T 14-10-2018 DA442_07690 251634ab3cff5fba5252676536ef2600 396 SUPERFAMILY SSF56796 26 392 8.37E-109 T 14-10-2018 DA442_07690 251634ab3cff5fba5252676536ef2600 396 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 276 296 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 DA442_05125 8406a535e34d0b3b4397b6dfee04267d 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 413 3.8E-157 T 14-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 DA442_05125 8406a535e34d0b3b4397b6dfee04267d 414 Pfam PF12704 MacB-like periplasmic core domain 30 241 5.2E-14 T 14-10-2018 IPR025857 MacB-like periplasmic core domain DA442_05125 8406a535e34d0b3b4397b6dfee04267d 414 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 4 414 7.5E-215 T 14-10-2018 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0016021|GO:0042953|GO:0042954|GO:0044874 DA442_05125 8406a535e34d0b3b4397b6dfee04267d 414 Pfam PF02687 FtsX-like permease family 301 407 4.7E-12 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DA442_24540 18c5fdc5860317c981dba36a1fe044a0 265 Gene3D G3DSA:3.90.1210.10 141 205 5.1E-5 T 14-10-2018 DA442_24540 18c5fdc5860317c981dba36a1fe044a0 265 Pfam PF13144 Chaperone for flagella basal body P-ring formation 91 261 2.8E-43 T 14-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal DA442_24540 18c5fdc5860317c981dba36a1fe044a0 265 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 129 264 1.8E-39 T 14-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal DA442_24540 18c5fdc5860317c981dba36a1fe044a0 265 SMART SM00858 141 202 4.0E-6 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 DA442_24540 18c5fdc5860317c981dba36a1fe044a0 265 Gene3D G3DSA:2.30.30.760 206 265 9.8E-13 T 14-10-2018 DA442_12810 ca4b57101ea439fdb2ae96e7a262230d 874 SUPERFAMILY SSF81593 187 310 5.02E-9 T 14-10-2018 DA442_12810 ca4b57101ea439fdb2ae96e7a262230d 874 SUPERFAMILY SSF55021 797 860 3.88E-10 T 14-10-2018 DA442_12810 ca4b57101ea439fdb2ae96e7a262230d 874 Gene3D G3DSA:3.30.70.260 796 872 5.6E-5 T 14-10-2018 DA442_12810 ca4b57101ea439fdb2ae96e7a262230d 874 PIRSF PIRSF006288 7 874 0.0 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 DA442_12810 ca4b57101ea439fdb2ae96e7a262230d 874 Pfam PF01966 HD domain 452 584 1.4E-12 T 14-10-2018 IPR006674 HD domain DA442_12810 ca4b57101ea439fdb2ae96e7a262230d 874 Pfam PF01842 ACT domain 802 849 6.6E-8 T 14-10-2018 IPR002912 ACT domain DA442_12810 ca4b57101ea439fdb2ae96e7a262230d 874 Pfam PF08335 GlnD PII-uridylyltransferase 176 314 3.3E-35 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 DA442_12810 ca4b57101ea439fdb2ae96e7a262230d 874 SUPERFAMILY SSF109604 418 585 2.29E-12 T 14-10-2018 DA442_12810 ca4b57101ea439fdb2ae96e7a262230d 874 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 874 333.623 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 DA442_12810 ca4b57101ea439fdb2ae96e7a262230d 874 Gene3D G3DSA:1.10.3210.10 435 582 6.3E-8 T 14-10-2018 DA442_12810 ca4b57101ea439fdb2ae96e7a262230d 874 Pfam PF01909 Nucleotidyltransferase domain 57 111 1.4E-7 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 DA442_12810 ca4b57101ea439fdb2ae96e7a262230d 874 SUPERFAMILY SSF81301 35 171 8.45E-20 T 14-10-2018 DA442_12810 ca4b57101ea439fdb2ae96e7a262230d 874 SUPERFAMILY SSF55021 689 761 3.88E-8 T 14-10-2018 DA442_12810 ca4b57101ea439fdb2ae96e7a262230d 874 SMART SM00471 447 594 2.1E-10 T 14-10-2018 IPR003607 HD/PDEase domain DA442_12810 ca4b57101ea439fdb2ae96e7a262230d 874 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 29 868 0.0 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 DA442_25810 934bf646ed54545403b1e1737d1ffabc 296 SUPERFAMILY SSF103481 193 285 9.02E-9 T 14-10-2018 DA442_25810 934bf646ed54545403b1e1737d1ffabc 296 Pfam PF00892 EamA-like transporter family 151 282 4.2E-9 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DA442_25810 934bf646ed54545403b1e1737d1ffabc 296 Pfam PF00892 EamA-like transporter family 8 142 3.9E-8 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DA442_25810 934bf646ed54545403b1e1737d1ffabc 296 SUPERFAMILY SSF103481 44 142 1.16E-8 T 14-10-2018 DA442_16950 75afad01c1a02dbb1382eac6221a48f3 310 Gene3D G3DSA:1.10.150.130 14 108 2.4E-17 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal DA442_16950 75afad01c1a02dbb1382eac6221a48f3 310 SUPERFAMILY SSF47823 16 107 4.51E-12 T 14-10-2018 DA442_16950 75afad01c1a02dbb1382eac6221a48f3 310 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 18 306 2.2E-108 T 14-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 DA442_16950 75afad01c1a02dbb1382eac6221a48f3 310 Gene3D G3DSA:1.10.443.10 121 298 1.3E-56 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DA442_16950 75afad01c1a02dbb1382eac6221a48f3 310 Pfam PF00589 Phage integrase family 122 290 1.1E-48 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DA442_16950 75afad01c1a02dbb1382eac6221a48f3 310 SUPERFAMILY SSF56349 116 302 9.42E-53 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DA442_16950 75afad01c1a02dbb1382eac6221a48f3 310 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 17 100 5.2E-20 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 DA442_16950 75afad01c1a02dbb1382eac6221a48f3 310 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 15 304 54.942 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD DA442_11150 56b9dda81d95a49755e063cab8314e42 225 SUPERFAMILY SSF46894 123 222 9.07E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DA442_11150 56b9dda81d95a49755e063cab8314e42 225 Pfam PF00072 Response regulator receiver domain 4 112 1.4E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_11150 56b9dda81d95a49755e063cab8314e42 225 SUPERFAMILY SSF52172 1 125 7.26E-39 T 14-10-2018 IPR011006 CheY-like superfamily DA442_11150 56b9dda81d95a49755e063cab8314e42 225 Gene3D G3DSA:1.10.10.10 122 223 1.4E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_11150 56b9dda81d95a49755e063cab8314e42 225 SMART SM00862 147 221 3.2E-14 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DA442_11150 56b9dda81d95a49755e063cab8314e42 225 SMART SM00448 2 113 4.8E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_11150 56b9dda81d95a49755e063cab8314e42 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 221 3.0E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DA442_11150 56b9dda81d95a49755e063cab8314e42 225 Gene3D G3DSA:3.40.50.2300 1 121 4.8E-34 T 14-10-2018 DA442_13580 68aea0ea352ee202f278f3ad91977a64 107 SUPERFAMILY SSF47413 10 72 8.85E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DA442_13580 68aea0ea352ee202f278f3ad91977a64 107 Gene3D G3DSA:1.10.260.40 2 77 1.3E-31 T 14-10-2018 DA442_13580 68aea0ea352ee202f278f3ad91977a64 107 Pfam PF01381 Helix-turn-helix 17 61 1.9E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DA442_13580 68aea0ea352ee202f278f3ad91977a64 107 SMART SM00530 16 69 3.2E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DA442_08835 f965d6c8c9e57f3bcfe739189ad9dc51 114 TIGRFAM TIGR02497 yscI_hrpB_dom: type III secretion apparatus protein, YscI/HrpB, C-terminal domain 76 114 6.6E-14 T 14-10-2018 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 DA442_08835 f965d6c8c9e57f3bcfe739189ad9dc51 114 Pfam PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI 27 114 8.8E-29 T 14-10-2018 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 DA442_03450 796647f71fcc01e5bc627e38421a3e03 429 Pfam PF00860 Permease family 17 391 2.1E-56 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 DA442_03450 796647f71fcc01e5bc627e38421a3e03 429 PIRSF PIRSF005353 1 429 4.1E-189 T 14-10-2018 IPR026033 Purine permease PbuG-like DA442_24925 c7578f12ed2c60c90a644575a98d0570 195 Pfam PF13649 Methyltransferase domain 36 126 8.6E-9 T 14-10-2018 DA442_24925 c7578f12ed2c60c90a644575a98d0570 195 Gene3D G3DSA:3.40.50.150 6 194 2.4E-19 T 14-10-2018 DA442_24925 c7578f12ed2c60c90a644575a98d0570 195 SUPERFAMILY SSF53335 5 186 5.97E-21 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_25125 472313ce2fdea29f4b2ef54614bceb58 173 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 5 173 1.7E-60 T 14-10-2018 IPR018636 Protein of unknown function DUF2058 DA442_12115 57e0f055c3418d6accd866299e0dad1c 504 Gene3D G3DSA:3.60.20.10 2 411 8.5E-159 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DA442_12115 57e0f055c3418d6accd866299e0dad1c 504 PIRSF PIRSF000485 1 479 4.4E-169 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 DA442_12115 57e0f055c3418d6accd866299e0dad1c 504 Gene3D G3DSA:3.40.50.2020 276 440 8.5E-159 T 14-10-2018 DA442_12115 57e0f055c3418d6accd866299e0dad1c 504 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 463 1.0E-165 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 DA442_12115 57e0f055c3418d6accd866299e0dad1c 504 Pfam PF13522 Glutamine amidotransferase domain 63 207 2.5E-17 T 14-10-2018 DA442_12115 57e0f055c3418d6accd866299e0dad1c 504 SUPERFAMILY SSF53271 249 482 9.96E-70 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like DA442_12115 57e0f055c3418d6accd866299e0dad1c 504 SUPERFAMILY SSF56235 2 256 5.49E-71 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DA442_12115 57e0f055c3418d6accd866299e0dad1c 504 Pfam PF00156 Phosphoribosyl transferase domain 278 389 7.5E-7 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DA442_12115 57e0f055c3418d6accd866299e0dad1c 504 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 463 45.067 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 DA442_20220 04ba75a14e9a1976d0850e6dace34624 413 Pfam PF00512 His Kinase A (phospho-acceptor) domain 222 282 1.3E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_20220 04ba75a14e9a1976d0850e6dace34624 413 Gene3D G3DSA:1.10.287.130 172 285 1.7E-10 T 14-10-2018 DA442_20220 04ba75a14e9a1976d0850e6dace34624 413 Gene3D G3DSA:3.30.565.10 295 413 1.7E-6 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_20220 04ba75a14e9a1976d0850e6dace34624 413 SUPERFAMILY SSF47384 205 282 3.34E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DA442_20220 04ba75a14e9a1976d0850e6dace34624 413 SMART SM00388 220 286 8.2E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_20220 04ba75a14e9a1976d0850e6dace34624 413 SUPERFAMILY SSF55874 298 400 8.49E-10 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_21985 bfa57cbe7bf5fd08dbb8eb149600a269 343 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 5 342 1.3E-181 T 14-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 DA442_21985 bfa57cbe7bf5fd08dbb8eb149600a269 343 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 136 2.6E-32 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DA442_21985 bfa57cbe7bf5fd08dbb8eb149600a269 343 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DA442_21985 bfa57cbe7bf5fd08dbb8eb149600a269 343 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 3 342 60.964 T 14-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 DA442_21985 bfa57cbe7bf5fd08dbb8eb149600a269 343 Gene3D G3DSA:3.40.50.720 155 288 5.1E-120 T 14-10-2018 DA442_21985 bfa57cbe7bf5fd08dbb8eb149600a269 343 SUPERFAMILY SSF50129 3 175 2.89E-53 T 14-10-2018 IPR011032 GroES-like superfamily DA442_21985 bfa57cbe7bf5fd08dbb8eb149600a269 343 SUPERFAMILY SSF51735 143 307 4.49E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_21985 bfa57cbe7bf5fd08dbb8eb149600a269 343 Pfam PF00107 Zinc-binding dehydrogenase 176 303 3.2E-28 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DA442_21985 bfa57cbe7bf5fd08dbb8eb149600a269 343 SMART SM00829 14 340 5.3E-5 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DA442_21985 bfa57cbe7bf5fd08dbb8eb149600a269 343 Gene3D G3DSA:3.90.180.10 22 330 5.1E-120 T 14-10-2018 DA442_06990 6cf0b8e0d77d711779db08b37ce206a2 265 Gene3D G3DSA:2.10.109.10 131 265 6.9E-36 T 14-10-2018 DA442_06990 6cf0b8e0d77d711779db08b37ce206a2 265 SUPERFAMILY SSF47413 38 117 4.56E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DA442_06990 6cf0b8e0d77d711779db08b37ce206a2 265 SUPERFAMILY SSF51306 166 263 5.41E-20 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily DA442_06990 6cf0b8e0d77d711779db08b37ce206a2 265 Pfam PF01381 Helix-turn-helix 70 110 1.8E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DA442_06990 6cf0b8e0d77d711779db08b37ce206a2 265 Pfam PF00717 Peptidase S24-like 173 248 3.7E-10 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C DA442_06990 6cf0b8e0d77d711779db08b37ce206a2 265 Gene3D G3DSA:1.10.260.40 68 114 5.8E-11 T 14-10-2018 DA442_06990 6cf0b8e0d77d711779db08b37ce206a2 265 SMART SM00530 51 110 8.7E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DA442_22165 0464053d4017beea948c7c5c5209f8a1 375 SUPERFAMILY SSF160544 244 351 7.59E-36 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal DA442_22165 0464053d4017beea948c7c5c5209f8a1 375 Gene3D G3DSA:3.40.1690.10 217 358 2.7E-52 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal DA442_22165 0464053d4017beea948c7c5c5209f8a1 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 6.0E-37 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DA442_22165 0464053d4017beea948c7c5c5209f8a1 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 6.0E-37 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DA442_22165 0464053d4017beea948c7c5c5209f8a1 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 6.0E-37 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DA442_22165 0464053d4017beea948c7c5c5209f8a1 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 6.0E-37 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DA442_22165 0464053d4017beea948c7c5c5209f8a1 375 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 6.0E-37 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DA442_22165 0464053d4017beea948c7c5c5209f8a1 375 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 352 1.9E-117 T 14-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 DA442_22165 0464053d4017beea948c7c5c5209f8a1 375 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 5.1E-118 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DA442_17685 8c2c3b54545b9c375d9b557ac9acdd3d 248 Gene3D G3DSA:2.50.20.10 15 244 7.3E-59 T 14-10-2018 DA442_17685 8c2c3b54545b9c375d9b557ac9acdd3d 248 Pfam PF17131 Outer membrane lipoprotein-sorting protein 64 244 2.4E-53 T 14-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein DA442_23360 077e55116c0da707d231cd33dd0869c5 408 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 5 407 23.882 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 DA442_23360 077e55116c0da707d231cd33dd0869c5 408 Pfam PF03616 Sodium/glutamate symporter 7 376 3.0E-153 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 DA442_23360 077e55116c0da707d231cd33dd0869c5 408 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 11 406 1.4E-137 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 DA442_11165 5baa71922940cee21c2a060ffcdabbbf 344 PIRSF PIRSF006278 45 342 1.0E-23 T 14-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase DA442_11165 5baa71922940cee21c2a060ffcdabbbf 344 Gene3D G3DSA:3.40.50.1100 79 183 9.4E-24 T 14-10-2018 DA442_11165 5baa71922940cee21c2a060ffcdabbbf 344 SUPERFAMILY SSF53686 55 341 2.66E-56 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DA442_11165 5baa71922940cee21c2a060ffcdabbbf 344 Gene3D G3DSA:3.40.50.1100 60 330 9.4E-24 T 14-10-2018 DA442_22575 3792a4c1917e5711171de2669f9b6a77 289 Gene3D G3DSA:3.40.1190.20 1 288 2.0E-86 T 14-10-2018 IPR029056 Ribokinase-like DA442_22575 3792a4c1917e5711171de2669f9b6a77 289 Hamap MF_01639 Pyridoxal kinase PdxY [pdxY]. 1 284 52.84 T 14-10-2018 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282 DA442_22575 3792a4c1917e5711171de2669f9b6a77 289 SUPERFAMILY SSF53613 2 275 2.18E-68 T 14-10-2018 IPR029056 Ribokinase-like DA442_22575 3792a4c1917e5711171de2669f9b6a77 289 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 285 1.3E-103 T 14-10-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 DA442_22575 3792a4c1917e5711171de2669f9b6a77 289 Pfam PF08543 Phosphomethylpyrimidine kinase 75 260 1.6E-20 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 DA442_06825 2ba3c8d21a40748692177203c9b616ed 418 SUPERFAMILY SSF51971 10 405 8.12E-38 T 14-10-2018 DA442_06825 2ba3c8d21a40748692177203c9b616ed 418 Gene3D G3DSA:3.50.50.60 112 402 1.9E-32 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_06825 2ba3c8d21a40748692177203c9b616ed 418 Pfam PF01266 FAD dependent oxidoreductase 12 399 3.3E-52 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DA442_06825 2ba3c8d21a40748692177203c9b616ed 418 SUPERFAMILY SSF54373 273 359 3.79E-9 T 14-10-2018 DA442_06825 2ba3c8d21a40748692177203c9b616ed 418 Gene3D G3DSA:3.50.50.60 12 65 2.3E-11 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_06825 2ba3c8d21a40748692177203c9b616ed 418 Gene3D G3DSA:3.30.9.10 142 360 1.9E-32 T 14-10-2018 DA442_18715 6094bfe1aa458bb736eb2ef35b0ea111 724 Gene3D G3DSA:1.10.520.10 433 723 4.0E-146 T 14-10-2018 DA442_18715 6094bfe1aa458bb736eb2ef35b0ea111 724 Hamap MF_01961 Catalase-peroxidase [katG]. 7 724 40.139 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 DA442_18715 6094bfe1aa458bb736eb2ef35b0ea111 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 67 92 3.9E-53 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 DA442_18715 6094bfe1aa458bb736eb2ef35b0ea111 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 267 290 3.9E-53 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 DA442_18715 6094bfe1aa458bb736eb2ef35b0ea111 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 26 48 3.9E-53 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 DA442_18715 6094bfe1aa458bb736eb2ef35b0ea111 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 478 504 3.9E-53 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 DA442_18715 6094bfe1aa458bb736eb2ef35b0ea111 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 52 65 3.9E-53 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 DA442_18715 6094bfe1aa458bb736eb2ef35b0ea111 724 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 11 723 0.0 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 DA442_18715 6094bfe1aa458bb736eb2ef35b0ea111 724 ProSitePatterns PS00436 Peroxidases active site signature. 90 101 - T 14-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 DA442_18715 6094bfe1aa458bb736eb2ef35b0ea111 724 PRINTS PR00458 Haem peroxidase superfamily signature 150 167 1.1E-17 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 DA442_18715 6094bfe1aa458bb736eb2ef35b0ea111 724 PRINTS PR00458 Haem peroxidase superfamily signature 259 274 1.1E-17 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 DA442_18715 6094bfe1aa458bb736eb2ef35b0ea111 724 PRINTS PR00458 Haem peroxidase superfamily signature 168 180 1.1E-17 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 DA442_18715 6094bfe1aa458bb736eb2ef35b0ea111 724 PRINTS PR00458 Haem peroxidase superfamily signature 90 104 1.1E-17 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 DA442_18715 6094bfe1aa458bb736eb2ef35b0ea111 724 PRINTS PR00458 Haem peroxidase superfamily signature 318 333 1.1E-17 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 DA442_18715 6094bfe1aa458bb736eb2ef35b0ea111 724 Gene3D G3DSA:1.10.520.10 28 432 1.1E-217 T 14-10-2018 DA442_18715 6094bfe1aa458bb736eb2ef35b0ea111 724 Pfam PF00141 Peroxidase 69 398 3.1E-50 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 DA442_18715 6094bfe1aa458bb736eb2ef35b0ea111 724 Pfam PF00141 Peroxidase 406 698 1.4E-35 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 DA442_18715 6094bfe1aa458bb736eb2ef35b0ea111 724 SUPERFAMILY SSF48113 432 723 1.92E-110 T 14-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 DA442_18715 6094bfe1aa458bb736eb2ef35b0ea111 724 Gene3D G3DSA:1.10.420.20 191 397 1.1E-217 T 14-10-2018 DA442_18715 6094bfe1aa458bb736eb2ef35b0ea111 724 SUPERFAMILY SSF48113 19 431 5.45E-154 T 14-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 DA442_18715 6094bfe1aa458bb736eb2ef35b0ea111 724 Gene3D G3DSA:1.10.420.10 578 699 4.0E-146 T 14-10-2018 DA442_13595 aa344b16eebcfe9101c92a962bb613aa 342 Pfam PF06834 TraU protein 43 339 4.7E-101 T 14-10-2018 IPR009649 TraU DA442_15540 8382a69b55e00d778e6c5f2e6f9dc522 139 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 100 118 - T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 DA442_15540 8382a69b55e00d778e6c5f2e6f9dc522 139 Gene3D G3DSA:2.60.120.460 2 139 1.7E-43 T 14-10-2018 IPR035917 YjbQ-like superfamily DA442_15540 8382a69b55e00d778e6c5f2e6f9dc522 139 SUPERFAMILY SSF111038 1 139 2.22E-50 T 14-10-2018 IPR035917 YjbQ-like superfamily DA442_15540 8382a69b55e00d778e6c5f2e6f9dc522 139 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 5 139 7.4E-46 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 DA442_15540 8382a69b55e00d778e6c5f2e6f9dc522 139 PIRSF PIRSF004681 1 139 4.3E-47 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 DA442_15540 8382a69b55e00d778e6c5f2e6f9dc522 139 Pfam PF01894 Uncharacterised protein family UPF0047 19 135 9.3E-40 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 DA442_05280 f4f1c24754a64adbc2f253842694920d 232 Gene3D G3DSA:3.30.70.1560 121 220 1.0E-40 T 14-10-2018 DA442_05280 f4f1c24754a64adbc2f253842694920d 232 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 61 231 2.2E-58 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 DA442_05280 f4f1c24754a64adbc2f253842694920d 232 Pfam PF00849 RNA pseudouridylate synthase 57 201 5.1E-17 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_05280 f4f1c24754a64adbc2f253842694920d 232 SUPERFAMILY SSF55120 47 230 6.08E-45 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_05280 f4f1c24754a64adbc2f253842694920d 232 Gene3D G3DSA:3.30.70.580 44 120 1.1E-26 T 14-10-2018 DA442_05280 f4f1c24754a64adbc2f253842694920d 232 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 92 106 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 DA442_04785 f26a12b38c3490a805c2e33a45c921d0 434 Gene3D G3DSA:3.10.50.40 150 246 4.1E-107 T 14-10-2018 DA442_04785 f26a12b38c3490a805c2e33a45c921d0 434 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 2.6E-42 T 14-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 DA442_04785 f26a12b38c3490a805c2e33a45c921d0 434 Gene3D G3DSA:3.30.70.1050 1 115 3.4E-41 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 DA442_04785 f26a12b38c3490a805c2e33a45c921d0 434 TIGRFAM TIGR00115 tig: trigger factor 11 412 2.0E-143 T 14-10-2018 IPR005215 Trigger factor GO:0015031 DA442_04785 f26a12b38c3490a805c2e33a45c921d0 434 SUPERFAMILY SSF109998 248 429 1.08E-49 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily DA442_04785 f26a12b38c3490a805c2e33a45c921d0 434 Gene3D G3DSA:1.10.3120.10 116 417 4.1E-107 T 14-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 DA442_04785 f26a12b38c3490a805c2e33a45c921d0 434 Hamap MF_00303 Trigger factor [tig]. 1 418 21.954 T 14-10-2018 IPR005215 Trigger factor GO:0015031 DA442_04785 f26a12b38c3490a805c2e33a45c921d0 434 PIRSF PIRSF003095 1 434 1.6E-130 T 14-10-2018 IPR005215 Trigger factor GO:0015031 DA442_04785 f26a12b38c3490a805c2e33a45c921d0 434 SUPERFAMILY SSF54534 90 241 7.46E-37 T 14-10-2018 DA442_04785 f26a12b38c3490a805c2e33a45c921d0 434 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 412 1.0E-40 T 14-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 DA442_04785 f26a12b38c3490a805c2e33a45c921d0 434 SUPERFAMILY SSF102735 1 130 3.01E-41 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 DA442_04785 f26a12b38c3490a805c2e33a45c921d0 434 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 233 1.4E-12 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DA442_14265 97d18935c42a9e3d9c425a76a49cf61f 289 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 17 124 3.6E-33 T 14-10-2018 IPR010627 Peptidase A24A, N-terminal DA442_14265 97d18935c42a9e3d9c425a76a49cf61f 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 224 239 2.7E-30 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial DA442_14265 97d18935c42a9e3d9c425a76a49cf61f 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 143 160 2.7E-30 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial DA442_14265 97d18935c42a9e3d9c425a76a49cf61f 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 201 211 2.7E-30 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial DA442_14265 97d18935c42a9e3d9c425a76a49cf61f 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 212 223 2.7E-30 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial DA442_14265 97d18935c42a9e3d9c425a76a49cf61f 289 Pfam PF01478 Type IV leader peptidase family 135 244 5.0E-28 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 DA442_14265 97d18935c42a9e3d9c425a76a49cf61f 289 Gene3D G3DSA:1.20.120.1220 110 284 5.9E-6 T 14-10-2018 DA442_11775 806364079777dd4e01da2682ba5f4f2a 907 SUPERFAMILY SSF46548 336 446 1.07E-21 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DA442_11775 806364079777dd4e01da2682ba5f4f2a 907 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 761 251.524 T 14-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 DA442_11775 806364079777dd4e01da2682ba5f4f2a 907 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 417 428 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DA442_11775 806364079777dd4e01da2682ba5f4f2a 907 Gene3D G3DSA:1.10.1060.10 364 445 1.4E-12 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DA442_11775 806364079777dd4e01da2682ba5f4f2a 907 SUPERFAMILY SSF142019 95 302 1.83E-59 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DA442_11775 806364079777dd4e01da2682ba5f4f2a 907 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 116 7.7E-34 T 14-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain DA442_11775 806364079777dd4e01da2682ba5f4f2a 907 Pfam PF12838 4Fe-4S dicluster domain 378 430 4.3E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DA442_11775 806364079777dd4e01da2682ba5f4f2a 907 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 447 1.4E-189 T 14-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 DA442_11775 806364079777dd4e01da2682ba5f4f2a 907 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 140 283 4.1E-47 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DA442_11775 806364079777dd4e01da2682ba5f4f2a 907 Gene3D G3DSA:3.40.50.11540 145 290 2.2E-12 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DA442_11775 806364079777dd4e01da2682ba5f4f2a 907 Pfam PF10531 SLBB domain 296 345 2.9E-9 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DA442_23050 069c4ca3a9df6ba2fcb21c55d0dbdd03 497 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 437 4.0E-94 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 DA442_23050 069c4ca3a9df6ba2fcb21c55d0dbdd03 497 Pfam PF00474 Sodium:solute symporter family 36 437 4.0E-105 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 DA442_23050 069c4ca3a9df6ba2fcb21c55d0dbdd03 497 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 7 490 6.7E-217 T 14-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 DA442_23050 069c4ca3a9df6ba2fcb21c55d0dbdd03 497 Gene3D G3DSA:1.20.1730.10 9 494 4.8E-95 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily DA442_02280 35f1214898f8f23a3376a9da8f6b471a 211 Gene3D G3DSA:1.20.1050.10 89 193 9.0E-79 T 14-10-2018 DA442_02280 35f1214898f8f23a3376a9da8f6b471a 211 SUPERFAMILY SSF52833 11 110 1.47E-21 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_02280 35f1214898f8f23a3376a9da8f6b471a 211 SUPERFAMILY SSF47616 82 208 1.34E-23 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DA442_02280 35f1214898f8f23a3376a9da8f6b471a 211 Gene3D G3DSA:3.40.30.10 11 202 9.0E-79 T 14-10-2018 DA442_02280 35f1214898f8f23a3376a9da8f6b471a 211 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 87 1.4E-16 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DA442_02280 35f1214898f8f23a3376a9da8f6b471a 211 Pfam PF00043 Glutathione S-transferase, C-terminal domain 105 194 5.3E-9 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal DA442_10580 0bdfe292a5e06c18f15f47641d021524 320 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 6 87 1.4E-23 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 DA442_10580 0bdfe292a5e06c18f15f47641d021524 320 Pfam PF00589 Phage integrase family 105 305 1.1E-43 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DA442_10580 0bdfe292a5e06c18f15f47641d021524 320 Gene3D G3DSA:1.10.150.130 1 94 5.9E-28 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal DA442_10580 0bdfe292a5e06c18f15f47641d021524 320 SUPERFAMILY SSF56349 99 315 1.65E-47 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DA442_10580 0bdfe292a5e06c18f15f47641d021524 320 TIGRFAM TIGR02249 integrase_gron: integron integrase 5 320 6.4E-157 T 14-10-2018 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 DA442_10580 0bdfe292a5e06c18f15f47641d021524 320 Gene3D G3DSA:1.10.443.10 97 310 6.2E-69 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DA442_23515 2c62723ecada5322d987823aae33ed09 267 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 9 260 7.9E-52 T 14-10-2018 IPR000150 Cof family GO:0016787 DA442_23515 2c62723ecada5322d987823aae33ed09 267 Pfam PF08282 haloacid dehalogenase-like hydrolase 9 260 2.3E-61 T 14-10-2018 DA442_23515 2c62723ecada5322d987823aae33ed09 267 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 9 233 2.1E-23 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 DA442_23515 2c62723ecada5322d987823aae33ed09 267 SUPERFAMILY SSF56784 5 264 8.92E-67 T 14-10-2018 IPR036412 HAD-like superfamily DA442_23515 2c62723ecada5322d987823aae33ed09 267 Gene3D G3DSA:3.30.1240.10 85 190 9.2E-79 T 14-10-2018 DA442_23515 2c62723ecada5322d987823aae33ed09 267 Gene3D G3DSA:3.40.50.1000 9 260 9.2E-79 T 14-10-2018 IPR023214 HAD superfamily DA442_16640 4185d78b54bfa78014ef7701058c2c14 321 SUPERFAMILY SSF55681 72 269 1.21E-60 T 14-10-2018 DA442_16640 4185d78b54bfa78014ef7701058c2c14 321 Pfam PF03099 Biotin/lipoate A/B protein ligase family 85 208 4.9E-20 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 DA442_16640 4185d78b54bfa78014ef7701058c2c14 321 Pfam PF02237 Biotin protein ligase C terminal domain 272 318 3.6E-11 T 14-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DA442_16640 4185d78b54bfa78014ef7701058c2c14 321 Gene3D G3DSA:3.30.930.10 67 271 2.7E-65 T 14-10-2018 DA442_16640 4185d78b54bfa78014ef7701058c2c14 321 Gene3D G3DSA:1.10.10.10 2 65 1.9E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_16640 4185d78b54bfa78014ef7701058c2c14 321 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 82 318 1.4E-66 T 14-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DA442_16640 4185d78b54bfa78014ef7701058c2c14 321 Gene3D G3DSA:2.30.30.100 272 314 2.2E-20 T 14-10-2018 DA442_16640 4185d78b54bfa78014ef7701058c2c14 321 Pfam PF08279 HTH domain 9 60 2.5E-12 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 DA442_16640 4185d78b54bfa78014ef7701058c2c14 321 SUPERFAMILY SSF46785 7 62 4.31E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_16640 4185d78b54bfa78014ef7701058c2c14 321 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 8 318 32.586 T 14-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 DA442_16640 4185d78b54bfa78014ef7701058c2c14 321 SUPERFAMILY SSF50037 272 318 1.05E-10 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal DA442_09335 38913a2812f5f7b450b92e7b75673e83 280 Gene3D G3DSA:3.30.420.10 130 272 4.3E-12 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DA442_09335 38913a2812f5f7b450b92e7b75673e83 280 Pfam PF00665 Integrase core domain 139 246 1.4E-25 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DA442_09335 38913a2812f5f7b450b92e7b75673e83 280 Pfam PF13276 HTH-like domain 62 109 2.2E-7 T 14-10-2018 IPR025948 HTH-like domain DA442_09335 38913a2812f5f7b450b92e7b75673e83 280 SUPERFAMILY SSF53098 131 256 1.46E-29 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DA442_11025 52769c3bb97f55333e7da589fd9d14c3 332 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 5 329 4.6E-130 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 DA442_11025 52769c3bb97f55333e7da589fd9d14c3 332 Pfam PF02885 Glycosyl transferase family, helical bundle domain 4 63 6.8E-17 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 DA442_11025 52769c3bb97f55333e7da589fd9d14c3 332 SUPERFAMILY SSF52418 70 329 6.15E-96 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 DA442_11025 52769c3bb97f55333e7da589fd9d14c3 332 Gene3D G3DSA:1.20.970.10 10 183 1.1E-125 T 14-10-2018 DA442_11025 52769c3bb97f55333e7da589fd9d14c3 332 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 331 40.299 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 DA442_11025 52769c3bb97f55333e7da589fd9d14c3 332 Pfam PF00591 Glycosyl transferase family, a/b domain 72 322 2.2E-107 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DA442_11025 52769c3bb97f55333e7da589fd9d14c3 332 SUPERFAMILY SSF47648 2 67 2.62E-19 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 DA442_11025 52769c3bb97f55333e7da589fd9d14c3 332 Gene3D G3DSA:3.40.1030.10 67 321 1.1E-125 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 DA442_17660 935879ca6c9509ff681b081565f083a5 69 Pfam PF00313 'Cold-shock' DNA-binding domain 6 67 2.3E-28 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DA442_17660 935879ca6c9509ff681b081565f083a5 69 SUPERFAMILY SSF50249 4 68 7.07E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_17660 935879ca6c9509ff681b081565f083a5 69 PRINTS PR00050 Cold shock protein signature 7 22 5.4E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DA442_17660 935879ca6c9509ff681b081565f083a5 69 PRINTS PR00050 Cold shock protein signature 27 36 5.4E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DA442_17660 935879ca6c9509ff681b081565f083a5 69 PRINTS PR00050 Cold shock protein signature 42 60 5.4E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DA442_17660 935879ca6c9509ff681b081565f083a5 69 PIRSF PIRSF002599 1 69 3.1E-24 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 DA442_17660 935879ca6c9509ff681b081565f083a5 69 Gene3D G3DSA:2.40.50.140 4 68 3.0E-28 T 14-10-2018 DA442_17660 935879ca6c9509ff681b081565f083a5 69 SMART SM00357 6 69 4.2E-30 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 DA442_17660 935879ca6c9509ff681b081565f083a5 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 14-10-2018 IPR019844 Cold-shock conserved site DA442_11115 e7d6af1ab77eeac711224feb223224d9 303 Gene3D G3DSA:1.10.10.10 1 92 2.0E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_11115 e7d6af1ab77eeac711224feb223224d9 303 SUPERFAMILY SSF46785 1 112 2.18E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_11115 e7d6af1ab77eeac711224feb223224d9 303 SUPERFAMILY SSF53850 89 296 3.53E-40 T 14-10-2018 DA442_11115 e7d6af1ab77eeac711224feb223224d9 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 9.5E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_11115 e7d6af1ab77eeac711224feb223224d9 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 9.5E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_11115 e7d6af1ab77eeac711224feb223224d9 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 9.5E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_11115 e7d6af1ab77eeac711224feb223224d9 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.8E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_11115 e7d6af1ab77eeac711224feb223224d9 303 Gene3D G3DSA:3.40.190.10 93 290 9.5E-73 T 14-10-2018 DA442_11115 e7d6af1ab77eeac711224feb223224d9 303 Pfam PF03466 LysR substrate binding domain 89 293 1.2E-41 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_11115 e7d6af1ab77eeac711224feb223224d9 303 Gene3D G3DSA:3.40.190.10 163 267 9.5E-73 T 14-10-2018 DA442_23310 ffae2b635b0369633f97fd2df42c87ec 553 SMART SM01049 44 130 2.0E-20 T 14-10-2018 IPR033480 Single Cache domain 2 DA442_23310 ffae2b635b0369633f97fd2df42c87ec 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 2 27 1.2E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DA442_23310 ffae2b635b0369633f97fd2df42c87ec 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 389 416 1.2E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DA442_23310 ffae2b635b0369633f97fd2df42c87ec 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 418 447 1.2E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DA442_23310 ffae2b635b0369633f97fd2df42c87ec 553 Gene3D G3DSA:1.10.287.950 221 553 1.3E-72 T 14-10-2018 DA442_23310 ffae2b635b0369633f97fd2df42c87ec 553 SMART SM00304 222 276 2.1E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_23310 ffae2b635b0369633f97fd2df42c87ec 553 Gene3D G3DSA:3.30.450.20 28 200 2.5E-34 T 14-10-2018 DA442_23310 ffae2b635b0369633f97fd2df42c87ec 553 SUPERFAMILY SSF58104 244 553 4.32E-75 T 14-10-2018 DA442_23310 ffae2b635b0369633f97fd2df42c87ec 553 Pfam PF17200 Single Cache domain 2 48 188 1.1E-30 T 14-10-2018 IPR033480 Single Cache domain 2 DA442_23310 ffae2b635b0369633f97fd2df42c87ec 553 SMART SM00283 291 552 2.6E-75 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_23310 ffae2b635b0369633f97fd2df42c87ec 553 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 336 518 9.3E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_19990 a8738724a0060572ea0e6fb0738fb8e2 321 Pfam PF06996 Type VI secretion, TssG 11 306 6.1E-69 T 14-10-2018 IPR010732 Type VI secretion, TssG-like DA442_19990 a8738724a0060572ea0e6fb0738fb8e2 321 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 12 306 2.4E-60 T 14-10-2018 IPR010732 Type VI secretion, TssG-like DA442_25630 e2a84de1c6a9a064b28f1433e829de36 315 Gene3D G3DSA:2.40.50.100 196 230 2.5E-9 T 14-10-2018 DA442_25630 e2a84de1c6a9a064b28f1433e829de36 315 Pfam PF13437 HlyD family secretion protein 195 299 4.5E-9 T 14-10-2018 DA442_25630 e2a84de1c6a9a064b28f1433e829de36 315 Gene3D G3DSA:1.10.287.470 97 162 3.8E-11 T 14-10-2018 DA442_25630 e2a84de1c6a9a064b28f1433e829de36 315 Gene3D G3DSA:2.40.50.100 34 95 5.3E-6 T 14-10-2018 DA442_25630 e2a84de1c6a9a064b28f1433e829de36 315 SUPERFAMILY SSF111369 102 158 1.83E-6 T 14-10-2018 DA442_25630 e2a84de1c6a9a064b28f1433e829de36 315 Gene3D G3DSA:1.10.287.470 168 195 2.5E-9 T 14-10-2018 DA442_25630 e2a84de1c6a9a064b28f1433e829de36 315 Gene3D G3DSA:2.40.30.170 231 308 2.5E-9 T 14-10-2018 DA442_24160 910d606601f86bd9e3d0997d967b863c 336 Gene3D G3DSA:3.40.190.10 32 326 1.8E-89 T 14-10-2018 DA442_24160 910d606601f86bd9e3d0997d967b863c 336 Pfam PF16868 NMT1-like family 32 326 1.3E-110 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family DA442_24160 910d606601f86bd9e3d0997d967b863c 336 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 3 326 1.0E-109 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family DA442_24160 910d606601f86bd9e3d0997d967b863c 336 SUPERFAMILY SSF53850 29 327 1.63E-64 T 14-10-2018 DA442_24160 910d606601f86bd9e3d0997d967b863c 336 Gene3D G3DSA:3.40.190.10 120 263 1.8E-89 T 14-10-2018 DA442_12780 07700cdd6c3bed3c9276e52ab982a001 251 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 184 201 - T 14-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 DA442_12780 07700cdd6c3bed3c9276e52ab982a001 251 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 11 239 39.576 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 DA442_12780 07700cdd6c3bed3c9276e52ab982a001 251 Gene3D G3DSA:3.40.1180.10 1 239 1.9E-93 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 DA442_12780 07700cdd6c3bed3c9276e52ab982a001 251 Pfam PF01255 Putative undecaprenyl diphosphate synthase 18 238 3.3E-80 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 DA442_12780 07700cdd6c3bed3c9276e52ab982a001 251 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 11 238 1.2E-93 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 DA442_12780 07700cdd6c3bed3c9276e52ab982a001 251 SUPERFAMILY SSF64005 9 234 2.75E-87 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 DA442_15735 d53423b9681ae6b012921a45097e4f65 699 SUPERFAMILY SSF54211 484 604 5.31E-47 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DA442_15735 d53423b9681ae6b012921a45097e4f65 699 Pfam PF03764 Elongation factor G, domain IV 484 603 1.3E-48 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 DA442_15735 d53423b9681ae6b012921a45097e4f65 699 PRINTS PR00315 GTP-binding elongation factor signature 58 66 9.4E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_15735 d53423b9681ae6b012921a45097e4f65 699 PRINTS PR00315 GTP-binding elongation factor signature 101 112 9.4E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_15735 d53423b9681ae6b012921a45097e4f65 699 PRINTS PR00315 GTP-binding elongation factor signature 85 95 9.4E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_15735 d53423b9681ae6b012921a45097e4f65 699 PRINTS PR00315 GTP-binding elongation factor signature 137 146 9.4E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_15735 d53423b9681ae6b012921a45097e4f65 699 PRINTS PR00315 GTP-binding elongation factor signature 12 25 9.4E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_15735 d53423b9681ae6b012921a45097e4f65 699 SMART SM00889 485 603 4.6E-76 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 DA442_15735 d53423b9681ae6b012921a45097e4f65 699 Hamap MF_00054_B Elongation factor G [fusA]. 6 697 113.477 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DA442_15735 d53423b9681ae6b012921a45097e4f65 699 Pfam PF14492 Elongation Factor G, domain II 409 483 1.5E-33 T 14-10-2018 DA442_15735 d53423b9681ae6b012921a45097e4f65 699 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 697 0.0 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DA442_15735 d53423b9681ae6b012921a45097e4f65 699 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 4.2E-66 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_15735 d53423b9681ae6b012921a45097e4f65 699 SUPERFAMILY SSF54980 608 695 3.36E-30 T 14-10-2018 IPR035647 EF-G domain III/V-like DA442_15735 d53423b9681ae6b012921a45097e4f65 699 Gene3D G3DSA:2.40.30.10 299 405 1.9E-48 T 14-10-2018 DA442_15735 d53423b9681ae6b012921a45097e4f65 699 Gene3D G3DSA:3.30.70.870 410 485 4.1E-32 T 14-10-2018 DA442_15735 d53423b9681ae6b012921a45097e4f65 699 Gene3D G3DSA:3.40.50.300 1 298 9.3E-115 T 14-10-2018 DA442_15735 d53423b9681ae6b012921a45097e4f65 699 Gene3D G3DSA:3.30.230.10 489 693 3.2E-92 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DA442_15735 d53423b9681ae6b012921a45097e4f65 699 SUPERFAMILY SSF50447 271 409 5.52E-36 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DA442_15735 d53423b9681ae6b012921a45097e4f65 699 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 187 1.4E-34 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DA442_15735 d53423b9681ae6b012921a45097e4f65 699 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site DA442_15735 d53423b9681ae6b012921a45097e4f65 699 Pfam PF03144 Elongation factor Tu domain 2 329 396 5.4E-18 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DA442_15735 d53423b9681ae6b012921a45097e4f65 699 Gene3D G3DSA:3.30.70.240 609 680 3.2E-92 T 14-10-2018 DA442_15735 d53423b9681ae6b012921a45097e4f65 699 SUPERFAMILY SSF54980 407 485 8.63E-25 T 14-10-2018 IPR035647 EF-G domain III/V-like DA442_15735 d53423b9681ae6b012921a45097e4f65 699 SUPERFAMILY SSF52540 6 288 5.66E-106 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_15735 d53423b9681ae6b012921a45097e4f65 699 Pfam PF00679 Elongation factor G C-terminus 605 692 4.0E-31 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like DA442_15735 d53423b9681ae6b012921a45097e4f65 699 SMART SM00838 605 693 6.1E-57 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like DA442_05150 1daeecf015ea74373340e4bdcd73fd21 59 Pfam PF03966 Trm112p-like protein 2 41 2.8E-11 T 14-10-2018 IPR005651 Trm112-like DA442_05150 1daeecf015ea74373340e4bdcd73fd21 59 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 27.799 T 14-10-2018 IPR038053 Uncharacterised protein family UPF0434 DA442_05150 1daeecf015ea74373340e4bdcd73fd21 59 Gene3D G3DSA:2.20.25.10 8 59 3.0E-24 T 14-10-2018 DA442_05150 1daeecf015ea74373340e4bdcd73fd21 59 SUPERFAMILY SSF158997 1 54 1.05E-20 T 14-10-2018 DA442_14750 e55072d4baa3d78c203d6c267b568f6e 316 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 1.8E-80 T 14-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 DA442_14750 e55072d4baa3d78c203d6c267b568f6e 316 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 178.175 T 14-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 DA442_14750 e55072d4baa3d78c203d6c267b568f6e 316 Gene3D G3DSA:3.40.50.20 1 129 5.4E-53 T 14-10-2018 DA442_14750 e55072d4baa3d78c203d6c267b568f6e 316 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 311 9.5E-141 T 14-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 DA442_14750 e55072d4baa3d78c203d6c267b568f6e 316 Gene3D G3DSA:3.30.1490.20 137 196 1.8E-29 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DA442_14750 e55072d4baa3d78c203d6c267b568f6e 316 SUPERFAMILY SSF52440 2 122 1.09E-46 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DA442_14750 e55072d4baa3d78c203d6c267b568f6e 316 Gene3D G3DSA:3.30.470.20 197 300 1.3E-40 T 14-10-2018 DA442_14750 e55072d4baa3d78c203d6c267b568f6e 316 SUPERFAMILY SSF56059 123 313 5.82E-59 T 14-10-2018 DA442_14750 e55072d4baa3d78c203d6c267b568f6e 316 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 7.1E-49 T 14-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 DA442_15335 ea495019d810dd10d03a9fb43bb6f91b 547 Gene3D G3DSA:3.55.50.30 50 146 1.1E-10 T 14-10-2018 DA442_15335 ea495019d810dd10d03a9fb43bb6f91b 547 Pfam PF07655 Secretin N-terminal domain 145 243 3.7E-25 T 14-10-2018 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 DA442_15335 ea495019d810dd10d03a9fb43bb6f91b 547 Pfam PF00263 Bacterial type II and III secretion system protein 346 523 8.2E-41 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 DA442_15335 ea495019d810dd10d03a9fb43bb6f91b 547 PRINTS PR00811 Bacterial general secretion pathway protein D signature 511 525 6.8E-19 T 14-10-2018 IPR001775 GspD/PilQ family DA442_15335 ea495019d810dd10d03a9fb43bb6f91b 547 PRINTS PR00811 Bacterial general secretion pathway protein D signature 488 506 6.8E-19 T 14-10-2018 IPR001775 GspD/PilQ family DA442_15335 ea495019d810dd10d03a9fb43bb6f91b 547 PRINTS PR00811 Bacterial general secretion pathway protein D signature 272 282 6.8E-19 T 14-10-2018 IPR001775 GspD/PilQ family DA442_15335 ea495019d810dd10d03a9fb43bb6f91b 547 PRINTS PR00811 Bacterial general secretion pathway protein D signature 341 365 6.8E-19 T 14-10-2018 IPR001775 GspD/PilQ family DA442_15335 ea495019d810dd10d03a9fb43bb6f91b 547 SMART SM00965 93 141 8.4E-6 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 DA442_15335 ea495019d810dd10d03a9fb43bb6f91b 547 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 238 523 1.3E-91 T 14-10-2018 IPR013358 Pilus biogenesis, MshL DA442_18410 09595fae00f6644281cc758a68578920 374 PRINTS PR00075 Fatty acid desaturase family 1 signature 188 209 2.8E-32 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 DA442_18410 09595fae00f6644281cc758a68578920 374 PRINTS PR00075 Fatty acid desaturase family 1 signature 37 59 2.8E-32 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 DA442_18410 09595fae00f6644281cc758a68578920 374 PRINTS PR00075 Fatty acid desaturase family 1 signature 231 245 2.8E-32 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 DA442_18410 09595fae00f6644281cc758a68578920 374 PRINTS PR00075 Fatty acid desaturase family 1 signature 98 127 2.8E-32 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 DA442_18410 09595fae00f6644281cc758a68578920 374 PRINTS PR00075 Fatty acid desaturase family 1 signature 60 80 2.8E-32 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 DA442_18410 09595fae00f6644281cc758a68578920 374 PRINTS PR00075 Fatty acid desaturase family 1 signature 157 175 2.8E-32 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 DA442_18410 09595fae00f6644281cc758a68578920 374 Pfam PF00487 Fatty acid desaturase 45 262 1.3E-20 T 14-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 DA442_18410 09595fae00f6644281cc758a68578920 374 PIRSF PIRSF000345 6 330 4.6E-100 T 14-10-2018 IPR009160 Acyl-CoA desaturase, haem/steroid binding domain-containing GO:0004768|GO:0006636|GO:0016021 MetaCyc: PWY-5987|MetaCyc: PWY-5996 DA442_24880 ceb9a2eca0c6243a595409e52c81ea67 293 Gene3D G3DSA:1.10.10.10 1 91 1.6E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_24880 ceb9a2eca0c6243a595409e52c81ea67 293 SUPERFAMILY SSF46785 2 109 5.17E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_24880 ceb9a2eca0c6243a595409e52c81ea67 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.6E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_24880 ceb9a2eca0c6243a595409e52c81ea67 293 Pfam PF03466 LysR substrate binding domain 89 291 1.5E-28 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_24880 ceb9a2eca0c6243a595409e52c81ea67 293 SUPERFAMILY SSF53850 89 292 3.44E-30 T 14-10-2018 DA442_24880 ceb9a2eca0c6243a595409e52c81ea67 293 Gene3D G3DSA:3.40.190.290 92 293 1.3E-24 T 14-10-2018 DA442_02720 83151c744029396f73fa497014920730 86 Gene3D G3DSA:1.20.58.110 1 86 3.9E-30 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_02720 83151c744029396f73fa497014920730 86 Pfam PF01649 Ribosomal protein S20 2 84 5.4E-28 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_02720 83151c744029396f73fa497014920730 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 6.9E-32 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_02720 83151c744029396f73fa497014920730 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 3.0E-36 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_02720 83151c744029396f73fa497014920730 86 SUPERFAMILY SSF46992 3 86 1.1E-32 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_02720 83151c744029396f73fa497014920730 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.696 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_02800 293786f6353e7ebea6df053c7a3fd7e8 375 SUPERFAMILY SSF51735 91 237 5.12E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_02800 293786f6353e7ebea6df053c7a3fd7e8 375 Gene3D G3DSA:1.10.3660.10 248 373 2.1E-49 T 14-10-2018 DA442_02800 293786f6353e7ebea6df053c7a3fd7e8 375 PIRSF PIRSF001499 1 374 2.9E-185 T 14-10-2018 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 DA442_02800 293786f6353e7ebea6df053c7a3fd7e8 375 SUPERFAMILY SSF48600 4 88 3.11E-23 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DA442_02800 293786f6353e7ebea6df053c7a3fd7e8 375 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 2.2E-41 T 14-10-2018 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 DA442_02800 293786f6353e7ebea6df053c7a3fd7e8 375 SUPERFAMILY SSF48179 241 366 1.07E-40 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DA442_02800 293786f6353e7ebea6df053c7a3fd7e8 375 Gene3D G3DSA:1.20.59.10 1 80 5.5E-17 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DA442_02800 293786f6353e7ebea6df053c7a3fd7e8 375 Pfam PF01817 Chorismate mutase type II 9 87 7.6E-21 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DA442_02800 293786f6353e7ebea6df053c7a3fd7e8 375 SMART SM00830 9 89 1.8E-28 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DA442_02800 293786f6353e7ebea6df053c7a3fd7e8 375 Gene3D G3DSA:3.40.50.720 81 247 9.1E-44 T 14-10-2018 DA442_02800 293786f6353e7ebea6df053c7a3fd7e8 375 Pfam PF02153 Prephenate dehydrogenase 135 344 1.6E-32 T 14-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 DA442_18285 b6edcf73386e2067f4222d72093b7338 289 Pfam PF03466 LysR substrate binding domain 119 279 1.3E-15 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_18285 b6edcf73386e2067f4222d72093b7338 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 9.1E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_18285 b6edcf73386e2067f4222d72093b7338 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 9.1E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_18285 b6edcf73386e2067f4222d72093b7338 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 9.1E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_18285 b6edcf73386e2067f4222d72093b7338 289 Gene3D G3DSA:1.10.10.10 1 87 1.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_18285 b6edcf73386e2067f4222d72093b7338 289 SUPERFAMILY SSF53850 119 276 1.52E-28 T 14-10-2018 DA442_18285 b6edcf73386e2067f4222d72093b7338 289 Gene3D G3DSA:3.40.190.10 152 250 4.1E-28 T 14-10-2018 DA442_18285 b6edcf73386e2067f4222d72093b7338 289 Gene3D G3DSA:3.40.190.10 114 274 4.1E-28 T 14-10-2018 DA442_18285 b6edcf73386e2067f4222d72093b7338 289 SUPERFAMILY SSF46785 3 84 1.44E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_18285 b6edcf73386e2067f4222d72093b7338 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 3.6E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_24205 cabacdad5d2986150fd7bc67e12b9cf1 367 Pfam PF12060 Domain of unknown function (DUF3541) 31 253 2.4E-113 T 14-10-2018 IPR021928 Protein of unknown function DUF3541 DA442_02870 3fe480aa01a42fb84a75a23f65e8a0cc 857 SUPERFAMILY SSF52540 546 852 1.24E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_02870 3fe480aa01a42fb84a75a23f65e8a0cc 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 1.9E-11 T 14-10-2018 IPR004176 Clp, N-terminal DA442_02870 3fe480aa01a42fb84a75a23f65e8a0cc 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 7.4E-14 T 14-10-2018 IPR004176 Clp, N-terminal DA442_02870 3fe480aa01a42fb84a75a23f65e8a0cc 857 SMART SM01086 766 855 7.9E-37 T 14-10-2018 IPR019489 Clp ATPase, C-terminal DA442_02870 3fe480aa01a42fb84a75a23f65e8a0cc 857 SMART SM00382 198 344 3.0E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_02870 3fe480aa01a42fb84a75a23f65e8a0cc 857 SMART SM00382 597 767 1.1E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_02870 3fe480aa01a42fb84a75a23f65e8a0cc 857 SUPERFAMILY SSF52540 159 545 4.3E-101 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_02870 3fe480aa01a42fb84a75a23f65e8a0cc 857 Gene3D G3DSA:1.10.8.60 766 857 9.3E-28 T 14-10-2018 DA442_02870 3fe480aa01a42fb84a75a23f65e8a0cc 857 Gene3D G3DSA:3.40.50.300 550 764 2.2E-89 T 14-10-2018 DA442_02870 3fe480aa01a42fb84a75a23f65e8a0cc 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 320 2.4E-13 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DA442_02870 3fe480aa01a42fb84a75a23f65e8a0cc 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 4.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 DA442_02870 3fe480aa01a42fb84a75a23f65e8a0cc 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 4.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 DA442_02870 3fe480aa01a42fb84a75a23f65e8a0cc 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 4.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 DA442_02870 3fe480aa01a42fb84a75a23f65e8a0cc 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 4.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 DA442_02870 3fe480aa01a42fb84a75a23f65e8a0cc 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 DA442_02870 3fe480aa01a42fb84a75a23f65e8a0cc 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 853 0.0 T 14-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 DA442_02870 3fe480aa01a42fb84a75a23f65e8a0cc 857 Gene3D G3DSA:3.40.50.300 348 544 8.2E-68 T 14-10-2018 DA442_02870 3fe480aa01a42fb84a75a23f65e8a0cc 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 DA442_02870 3fe480aa01a42fb84a75a23f65e8a0cc 857 Gene3D G3DSA:3.40.50.300 158 347 7.3E-75 T 14-10-2018 DA442_02870 3fe480aa01a42fb84a75a23f65e8a0cc 857 SUPERFAMILY SSF81923 4 156 1.08E-42 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 DA442_02870 3fe480aa01a42fb84a75a23f65e8a0cc 857 Gene3D G3DSA:1.10.1780.10 1 148 1.3E-32 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 DA442_02870 3fe480aa01a42fb84a75a23f65e8a0cc 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 3.9E-57 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DA442_02870 3fe480aa01a42fb84a75a23f65e8a0cc 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 3.7E-28 T 14-10-2018 IPR019489 Clp ATPase, C-terminal DA442_11235 18159c8ff1c4aca2ea249294ab09d102 186 Gene3D G3DSA:3.40.630.30 2 179 8.7E-29 T 14-10-2018 DA442_11235 18159c8ff1c4aca2ea249294ab09d102 186 Pfam PF13302 Acetyltransferase (GNAT) domain 10 146 8.9E-19 T 14-10-2018 IPR000182 GNAT domain DA442_11235 18159c8ff1c4aca2ea249294ab09d102 186 SUPERFAMILY SSF55729 1 157 3.24E-28 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_20665 ac04b89ad7aff73d52ecf29d1d49f05a 348 PIRSF PIRSF000235 1 348 1.7E-195 T 14-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 DA442_20665 ac04b89ad7aff73d52ecf29d1d49f05a 348 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 DA442_20665 ac04b89ad7aff73d52ecf29d1d49f05a 348 Gene3D G3DSA:3.20.20.70 1 345 3.7E-116 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_20665 ac04b89ad7aff73d52ecf29d1d49f05a 348 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 338 1.7E-79 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 DA442_20665 ac04b89ad7aff73d52ecf29d1d49f05a 348 Hamap MF_00596 GMP reductase [guaC]. 1 345 49.85 T 14-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 DA442_20665 ac04b89ad7aff73d52ecf29d1d49f05a 348 SUPERFAMILY SSF51412 6 336 6.67E-98 T 14-10-2018 DA442_20665 ac04b89ad7aff73d52ecf29d1d49f05a 348 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 3.3E-184 T 14-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 DA442_20665 ac04b89ad7aff73d52ecf29d1d49f05a 348 SMART SM01240 7 344 4.4E-136 T 14-10-2018 DA442_19420 e318683c1be509b9b908a3b04a5264c5 277 SUPERFAMILY SSF46785 8 88 5.2E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_19420 e318683c1be509b9b908a3b04a5264c5 277 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 63 2.1E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_19420 e318683c1be509b9b908a3b04a5264c5 277 Gene3D G3DSA:1.10.10.10 5 88 1.1E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_19420 e318683c1be509b9b908a3b04a5264c5 277 SUPERFAMILY SSF53850 92 267 1.18E-17 T 14-10-2018 DA442_19420 e318683c1be509b9b908a3b04a5264c5 277 Pfam PF03466 LysR substrate binding domain 92 167 1.2E-11 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_19420 e318683c1be509b9b908a3b04a5264c5 277 Gene3D G3DSA:3.40.190.290 178 268 3.3E-5 T 14-10-2018 DA442_19420 e318683c1be509b9b908a3b04a5264c5 277 Gene3D G3DSA:3.40.190.10 89 177 4.4E-15 T 14-10-2018 DA442_16725 c970c72f653999135a9c00882aba767c 624 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 2 624 33.725 T 14-10-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0015420|GO:0015889|GO:0016020 DA442_16725 c970c72f653999135a9c00882aba767c 624 Gene3D G3DSA:2.40.170.20 157 624 9.1E-107 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DA442_16725 c970c72f653999135a9c00882aba767c 624 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 607 624 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site DA442_16725 c970c72f653999135a9c00882aba767c 624 Pfam PF00593 TonB dependent receptor 212 623 2.3E-44 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DA442_16725 c970c72f653999135a9c00882aba767c 624 SUPERFAMILY SSF56935 29 624 2.55E-101 T 14-10-2018 DA442_16725 c970c72f653999135a9c00882aba767c 624 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 148 2.2E-24 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain DA442_16725 c970c72f653999135a9c00882aba767c 624 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 36 - T 14-10-2018 IPR010916 TonB box, conserved site DA442_16725 c970c72f653999135a9c00882aba767c 624 Gene3D G3DSA:2.170.130.10 30 152 8.4E-31 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DA442_23860 abec8cd4006261126b11b386620400ce 285 Pfam PF08543 Phosphomethylpyrimidine kinase 27 275 1.7E-94 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 DA442_23860 abec8cd4006261126b11b386620400ce 285 Gene3D G3DSA:3.40.1190.20 2 284 8.8E-102 T 14-10-2018 IPR029056 Ribokinase-like DA442_23860 abec8cd4006261126b11b386620400ce 285 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 20 277 2.7E-101 T 14-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DA442_23860 abec8cd4006261126b11b386620400ce 285 SUPERFAMILY SSF53613 17 278 1.42E-81 T 14-10-2018 IPR029056 Ribokinase-like DA442_16240 c1789004b1c631d381d5140fe40db484 229 Gene3D G3DSA:3.40.50.2300 1 127 1.0E-36 T 14-10-2018 DA442_16240 c1789004b1c631d381d5140fe40db484 229 SUPERFAMILY SSF46894 124 226 9.07E-25 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DA442_16240 c1789004b1c631d381d5140fe40db484 229 SUPERFAMILY SSF52172 1 123 1.85E-39 T 14-10-2018 IPR011006 CheY-like superfamily DA442_16240 c1789004b1c631d381d5140fe40db484 229 SMART SM00862 149 225 1.4E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DA442_16240 c1789004b1c631d381d5140fe40db484 229 SMART SM00448 2 111 4.6E-44 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_16240 c1789004b1c631d381d5140fe40db484 229 Gene3D G3DSA:1.10.10.10 128 229 1.4E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_16240 c1789004b1c631d381d5140fe40db484 229 Pfam PF00072 Response regulator receiver domain 4 112 9.7E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_16240 c1789004b1c631d381d5140fe40db484 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 225 6.4E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DA442_07485 b0f4618d3c86359d5af6012d3beae273 250 Pfam PF03741 Integral membrane protein TerC family 16 203 5.7E-44 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 DA442_04130 33998c42a1e60e7f16c01305d025055c 646 SUPERFAMILY SSF64518 172 645 1.23E-26 T 14-10-2018 DA442_04130 33998c42a1e60e7f16c01305d025055c 646 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 5 328 9.4E-61 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 DA442_04130 33998c42a1e60e7f16c01305d025055c 646 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 600 645 7.5E-9 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DA442_04130 33998c42a1e60e7f16c01305d025055c 646 PRINTS PR01005 Flagellar hook-associated protein signature 50 72 2.0E-8 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 DA442_04130 33998c42a1e60e7f16c01305d025055c 646 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 2.0E-8 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 DA442_04130 33998c42a1e60e7f16c01305d025055c 646 PRINTS PR01005 Flagellar hook-associated protein signature 360 382 2.0E-8 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 DA442_04130 33998c42a1e60e7f16c01305d025055c 646 PRINTS PR01005 Flagellar hook-associated protein signature 158 182 2.0E-8 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 DA442_20915 9a49e1d970dc4be1838a6370d35e1a0f 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DA442_20915 9a49e1d970dc4be1838a6370d35e1a0f 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.5E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_20915 9a49e1d970dc4be1838a6370d35e1a0f 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.5E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_20915 9a49e1d970dc4be1838a6370d35e1a0f 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.5E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_20915 9a49e1d970dc4be1838a6370d35e1a0f 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.5E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_20915 9a49e1d970dc4be1838a6370d35e1a0f 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.5E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_20915 9a49e1d970dc4be1838a6370d35e1a0f 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 2.5E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_20915 9a49e1d970dc4be1838a6370d35e1a0f 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 184 7.0E-4 T 14-10-2018 DA442_20915 9a49e1d970dc4be1838a6370d35e1a0f 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 4.4E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_20915 9a49e1d970dc4be1838a6370d35e1a0f 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 4.4E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_20915 9a49e1d970dc4be1838a6370d35e1a0f 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 4.4E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_20915 9a49e1d970dc4be1838a6370d35e1a0f 246 SUPERFAMILY SSF51735 2 245 6.31E-78 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_20915 9a49e1d970dc4be1838a6370d35e1a0f 246 Gene3D G3DSA:3.40.50.720 1 245 1.2E-75 T 14-10-2018 DA442_20915 9a49e1d970dc4be1838a6370d35e1a0f 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 243 3.0E-58 T 14-10-2018 DA442_20915 9a49e1d970dc4be1838a6370d35e1a0f 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 3 245 5.0E-116 T 14-10-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|MetaCyc: PWY-7948 DA442_13360 92d0b992ca4aeb3e3420a80fe7129e60 568 Pfam PF00501 AMP-binding enzyme 29 445 9.4E-88 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DA442_13360 92d0b992ca4aeb3e3420a80fe7129e60 568 ProSitePatterns PS00455 Putative AMP-binding domain signature. 187 198 - T 14-10-2018 IPR020845 AMP-binding, conserved site DA442_13360 92d0b992ca4aeb3e3420a80fe7129e60 568 Gene3D G3DSA:3.40.50.12780 20 441 1.2E-84 T 14-10-2018 DA442_13360 92d0b992ca4aeb3e3420a80fe7129e60 568 SUPERFAMILY SSF56801 21 552 1.7E-110 T 14-10-2018 DA442_01495 45105391f0f72787dbeb5ba6b8ee3184 130 Pfam PF00410 Ribosomal protein S8 5 129 3.6E-47 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01495 45105391f0f72787dbeb5ba6b8ee3184 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.213 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01495 45105391f0f72787dbeb5ba6b8ee3184 130 SUPERFAMILY SSF56047 2 129 3.01E-44 T 14-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01495 45105391f0f72787dbeb5ba6b8ee3184 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01495 45105391f0f72787dbeb5ba6b8ee3184 130 Gene3D G3DSA:3.30.1490.10 73 130 1.1E-25 T 14-10-2018 DA442_01495 45105391f0f72787dbeb5ba6b8ee3184 130 Gene3D G3DSA:3.30.1370.30 2 72 6.5E-26 T 14-10-2018 DA442_00520 44c5601353e3ee3bae0119b1322ad3b7 246 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 10 227 1.3E-76 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DA442_00520 44c5601353e3ee3bae0119b1322ad3b7 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 86 104 1.3E-51 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DA442_00520 44c5601353e3ee3bae0119b1322ad3b7 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 9 36 1.3E-51 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DA442_00520 44c5601353e3ee3bae0119b1322ad3b7 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 104 130 1.3E-51 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DA442_00520 44c5601353e3ee3bae0119b1322ad3b7 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 155 183 1.3E-51 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DA442_00520 44c5601353e3ee3bae0119b1322ad3b7 246 Pfam PF00902 Sec-independent protein translocase protein (TatC) 13 222 3.8E-67 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DA442_00520 44c5601353e3ee3bae0119b1322ad3b7 246 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 5 239 16.081 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DA442_00520 44c5601353e3ee3bae0119b1322ad3b7 246 ProSitePatterns PS01218 TatC family signature. 155 174 - T 14-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site DA442_03335 44ad6df2858aa52b4d26d5e2a9d39ce1 419 Pfam PF11301 Protein of unknown function (DUF3103) 63 417 7.4E-181 T 14-10-2018 IPR021452 Protein of unknown function DUF3103 DA442_24770 d069c118aa2095b3146be8359a809651 241 Pfam PF00293 NUDIX domain 19 148 1.3E-8 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DA442_24770 d069c118aa2095b3146be8359a809651 241 Gene3D G3DSA:3.90.79.10 3 161 4.6E-26 T 14-10-2018 DA442_24770 d069c118aa2095b3146be8359a809651 241 SUPERFAMILY SSF55811 16 159 2.84E-18 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DA442_13875 250e4f8bdfa55e2307da19e4ec91e84a 711 SUPERFAMILY SSF54211 293 489 1.16E-46 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DA442_13875 250e4f8bdfa55e2307da19e4ec91e84a 711 Gene3D G3DSA:3.30.230.70 234 550 4.0E-115 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DA442_13875 250e4f8bdfa55e2307da19e4ec91e84a 711 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 321 1.9E-24 T 14-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 DA442_13875 250e4f8bdfa55e2307da19e4ec91e84a 711 Gene3D G3DSA:2.40.50.140 623 694 1.7E-29 T 14-10-2018 DA442_13875 250e4f8bdfa55e2307da19e4ec91e84a 711 SUPERFAMILY SSF54791 555 640 5.06E-22 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 DA442_13875 250e4f8bdfa55e2307da19e4ec91e84a 711 Pfam PF00013 KH domain 557 615 1.6E-8 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 DA442_13875 250e4f8bdfa55e2307da19e4ec91e84a 711 Pfam PF01138 3' exoribonuclease family, domain 1 17 145 6.1E-18 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DA442_13875 250e4f8bdfa55e2307da19e4ec91e84a 711 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 4.2E-20 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DA442_13875 250e4f8bdfa55e2307da19e4ec91e84a 711 Pfam PF00575 S1 RNA binding domain 620 691 2.0E-18 T 14-10-2018 IPR003029 S1 domain GO:0003676 DA442_13875 250e4f8bdfa55e2307da19e4ec91e84a 711 Gene3D G3DSA:3.30.230.70 2 229 3.7E-76 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DA442_13875 250e4f8bdfa55e2307da19e4ec91e84a 711 Pfam PF03725 3' exoribonuclease family, domain 2 148 211 2.0E-12 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DA442_13875 250e4f8bdfa55e2307da19e4ec91e84a 711 SMART SM00316 621 691 3.3E-25 T 14-10-2018 IPR022967 RNA-binding domain, S1 DA442_13875 250e4f8bdfa55e2307da19e4ec91e84a 711 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 4 694 30.135 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 DA442_13875 250e4f8bdfa55e2307da19e4ec91e84a 711 SUPERFAMILY SSF55666 146 236 1.33E-28 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DA442_13875 250e4f8bdfa55e2307da19e4ec91e84a 711 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 11 692 0.0 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 DA442_13875 250e4f8bdfa55e2307da19e4ec91e84a 711 SUPERFAMILY SSF55666 451 549 3.23E-27 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DA442_13875 250e4f8bdfa55e2307da19e4ec91e84a 711 SUPERFAMILY SSF54211 5 145 5.57E-48 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DA442_13875 250e4f8bdfa55e2307da19e4ec91e84a 711 Gene3D G3DSA:3.30.1370.10 551 622 1.4E-18 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 DA442_13875 250e4f8bdfa55e2307da19e4ec91e84a 711 SUPERFAMILY SSF50249 621 704 2.4E-22 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_13875 250e4f8bdfa55e2307da19e4ec91e84a 711 PIRSF PIRSF005499 2 711 1.4E-296 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 DA442_13875 250e4f8bdfa55e2307da19e4ec91e84a 711 SMART SM00322 553 618 3.6E-11 T 14-10-2018 IPR004087 K Homology domain GO:0003676 DA442_19195 7e4973c10050c770badd7c10366f8dcd 144 Gene3D G3DSA:3.10.129.10 1 143 4.4E-57 T 14-10-2018 DA442_19195 7e4973c10050c770badd7c10366f8dcd 144 SUPERFAMILY SSF54637 1 137 1.84E-30 T 14-10-2018 IPR029069 HotDog domain superfamily DA442_19195 7e4973c10050c770badd7c10366f8dcd 144 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 20 135 4.0E-39 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 DA442_19195 7e4973c10050c770badd7c10366f8dcd 144 Pfam PF03061 Thioesterase superfamily 52 128 9.2E-15 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 DA442_25745 1b4c8d0286ec506b16ffea3de1174387 454 Pfam PF07670 Nucleoside recognition 140 233 1.8E-7 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 DA442_14190 eb88ad8db514a065418b3ce47b439fa6 305 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_14190 eb88ad8db514a065418b3ce47b439fa6 305 SMART SM00382 29 213 2.1E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_14190 eb88ad8db514a065418b3ce47b439fa6 305 Pfam PF00005 ABC transporter 20 164 6.6E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_14190 eb88ad8db514a065418b3ce47b439fa6 305 Gene3D G3DSA:3.40.50.300 1 237 5.1E-65 T 14-10-2018 DA442_14190 eb88ad8db514a065418b3ce47b439fa6 305 SUPERFAMILY SSF52540 3 231 1.78E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_25815 9e51ecb4da19981c35b3d3786f655e35 314 Gene3D G3DSA:2.40.160.10 13 314 2.8E-60 T 14-10-2018 IPR023614 Porin domain superfamily DA442_25815 9e51ecb4da19981c35b3d3786f655e35 314 Pfam PF13609 Gram-negative porin 3 284 1.0E-26 T 14-10-2018 DA442_25815 9e51ecb4da19981c35b3d3786f655e35 314 SUPERFAMILY SSF56935 13 314 1.81E-49 T 14-10-2018 DA442_25675 15911a327928f4851dbd4eef62cc6dc7 585 Pfam PF12793 Sugar transport-related sRNA regulator N-term 6 119 1.7E-32 T 14-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain DA442_25675 15911a327928f4851dbd4eef62cc6dc7 585 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 311 5.7E-23 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain DA442_25675 15911a327928f4851dbd4eef62cc6dc7 585 SUPERFAMILY SSF53850 116 583 5.61E-62 T 14-10-2018 DA442_25675 15911a327928f4851dbd4eef62cc6dc7 585 Gene3D G3DSA:3.40.190.10 122 339 1.7E-31 T 14-10-2018 DA442_04955 40a8884a3878a145c34da57794d722f9 119 Pfam PF06844 Protein of unknown function (DUF1244) 49 115 3.5E-35 T 14-10-2018 IPR023163 SMc04008-like domain DA442_04955 40a8884a3878a145c34da57794d722f9 119 Gene3D G3DSA:1.10.3340.10 18 119 2.3E-45 T 14-10-2018 IPR036810 SMc04008-like superfamily DA442_04955 40a8884a3878a145c34da57794d722f9 119 SUPERFAMILY SSF158757 22 99 3.66E-36 T 14-10-2018 IPR036810 SMc04008-like superfamily DA442_03585 fea1b463ad4a80ff020352246102e0a2 521 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 362 519 1.8E-35 T 14-10-2018 IPR000160 GGDEF domain DA442_03585 fea1b463ad4a80ff020352246102e0a2 521 SUPERFAMILY SSF55073 366 518 2.35E-34 T 14-10-2018 IPR029787 Nucleotide cyclase DA442_03585 fea1b463ad4a80ff020352246102e0a2 521 Pfam PF00990 Diguanylate cyclase, GGDEF domain 363 517 1.1E-34 T 14-10-2018 IPR000160 GGDEF domain DA442_03585 fea1b463ad4a80ff020352246102e0a2 521 Gene3D G3DSA:3.30.70.270 351 521 8.7E-40 T 14-10-2018 DA442_03585 fea1b463ad4a80ff020352246102e0a2 521 SMART SM00267 351 521 8.6E-34 T 14-10-2018 IPR000160 GGDEF domain DA442_12025 8008a07c55f320c44fe0e8d1d5cd9561 94 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 75 1.2E-19 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain DA442_12025 8008a07c55f320c44fe0e8d1d5cd9561 94 Gene3D G3DSA:3.30.70.100 1 94 3.6E-30 T 14-10-2018 DA442_12025 8008a07c55f320c44fe0e8d1d5cd9561 94 SUPERFAMILY SSF54909 1 93 1.65E-28 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel DA442_01780 98ce6ed3011d0d138e7117ce38d3d1cb 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 2.0E-18 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01780 98ce6ed3011d0d138e7117ce38d3d1cb 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.456 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01780 98ce6ed3011d0d138e7117ce38d3d1cb 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 2.7E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01780 98ce6ed3011d0d138e7117ce38d3d1cb 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 2.7E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01780 98ce6ed3011d0d138e7117ce38d3d1cb 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 2.7E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01780 98ce6ed3011d0d138e7117ce38d3d1cb 85 Gene3D G3DSA:2.40.50.100 21 85 1.1E-31 T 14-10-2018 DA442_01780 98ce6ed3011d0d138e7117ce38d3d1cb 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 1.4E-43 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01780 98ce6ed3011d0d138e7117ce38d3d1cb 85 Pfam PF01016 Ribosomal L27 protein 2 82 9.4E-40 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01780 98ce6ed3011d0d138e7117ce38d3d1cb 85 SUPERFAMILY SSF110324 2 80 1.01E-34 T 14-10-2018 DA442_01780 98ce6ed3011d0d138e7117ce38d3d1cb 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 14-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_14095 6546fa979e1da1fc69d387a25b8d4279 112 SUPERFAMILY SSF54913 1 112 2.8E-45 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta DA442_14095 6546fa979e1da1fc69d387a25b8d4279 112 PRINTS PR00340 P-II protein signature 83 103 6.8E-41 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DA442_14095 6546fa979e1da1fc69d387a25b8d4279 112 PRINTS PR00340 P-II protein signature 23 41 6.8E-41 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DA442_14095 6546fa979e1da1fc69d387a25b8d4279 112 PRINTS PR00340 P-II protein signature 2 17 6.8E-41 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DA442_14095 6546fa979e1da1fc69d387a25b8d4279 112 PRINTS PR00340 P-II protein signature 52 75 6.8E-41 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DA442_14095 6546fa979e1da1fc69d387a25b8d4279 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 8.1E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DA442_14095 6546fa979e1da1fc69d387a25b8d4279 112 SMART SM00938 4 105 2.3E-68 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DA442_14095 6546fa979e1da1fc69d387a25b8d4279 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 14-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 DA442_14095 6546fa979e1da1fc69d387a25b8d4279 112 PIRSF PIRSF039144 1 112 1.1E-55 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DA442_14095 6546fa979e1da1fc69d387a25b8d4279 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 DA442_14095 6546fa979e1da1fc69d387a25b8d4279 112 Gene3D G3DSA:3.30.70.120 1 112 1.2E-46 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DA442_11615 bde58e885714140452c8161ab710bbf0 178 Pfam PF02600 Disulfide bond formation protein DsbB 14 162 2.5E-43 T 14-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 DA442_11615 bde58e885714140452c8161ab710bbf0 178 SUPERFAMILY SSF158442 17 163 2.88E-44 T 14-10-2018 IPR023380 DsbB-like superfamily DA442_11615 bde58e885714140452c8161ab710bbf0 178 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 9 170 21.991 T 14-10-2018 IPR022920 Disulphide bond formation protein DsbB DA442_11615 bde58e885714140452c8161ab710bbf0 178 Gene3D G3DSA:1.20.1550.10 3 177 5.4E-60 T 14-10-2018 IPR023380 DsbB-like superfamily DA442_21815 813210113194d30ddcc7b01714613609 236 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.842 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 DA442_21815 813210113194d30ddcc7b01714613609 236 Gene3D G3DSA:3.40.50.1580 1 236 9.0E-76 T 14-10-2018 DA442_21815 813210113194d30ddcc7b01714613609 236 Pfam PF01048 Phosphorylase superfamily 17 222 1.3E-34 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 DA442_21815 813210113194d30ddcc7b01714613609 236 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 233 8.7E-114 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 DA442_21815 813210113194d30ddcc7b01714613609 236 SUPERFAMILY SSF53167 3 234 5.37E-92 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 DA442_02095 f33d8a72f030d4bff9547a71dd1e8537 147 Gene3D G3DSA:1.10.10.410 91 147 9.1E-21 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal DA442_02095 f33d8a72f030d4bff9547a71dd1e8537 147 Gene3D G3DSA:1.10.1510.10 1 90 3.8E-28 T 14-10-2018 DA442_02095 f33d8a72f030d4bff9547a71dd1e8537 147 Pfam PF09424 Yqey-like protein 5 146 3.9E-58 T 14-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 DA442_02095 f33d8a72f030d4bff9547a71dd1e8537 147 SUPERFAMILY SSF89095 1 146 2.46E-45 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 DA442_12800 f906f65ac86428713f372396bb26d105 242 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 DA442_12800 f906f65ac86428713f372396bb26d105 242 SUPERFAMILY SSF52313 6 232 9.03E-96 T 14-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily DA442_12800 f906f65ac86428713f372396bb26d105 242 Gene3D G3DSA:1.10.287.610 103 150 9.5E-92 T 14-10-2018 DA442_12800 f906f65ac86428713f372396bb26d105 242 Pfam PF00318 Ribosomal protein S2 9 224 1.3E-93 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_12800 f906f65ac86428713f372396bb26d105 242 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 DA442_12800 f906f65ac86428713f372396bb26d105 242 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 2.3E-107 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_12800 f906f65ac86428713f372396bb26d105 242 PRINTS PR00395 Ribosomal protein S2 signature 158 175 4.1E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_12800 f906f65ac86428713f372396bb26d105 242 PRINTS PR00395 Ribosomal protein S2 signature 196 210 4.1E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_12800 f906f65ac86428713f372396bb26d105 242 PRINTS PR00395 Ribosomal protein S2 signature 37 46 4.1E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_12800 f906f65ac86428713f372396bb26d105 242 PRINTS PR00395 Ribosomal protein S2 signature 175 186 4.1E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_12800 f906f65ac86428713f372396bb26d105 242 PRINTS PR00395 Ribosomal protein S2 signature 6 24 4.1E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_12800 f906f65ac86428713f372396bb26d105 242 PRINTS PR00395 Ribosomal protein S2 signature 87 104 4.1E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_12800 f906f65ac86428713f372396bb26d105 242 Gene3D G3DSA:3.40.50.10490 8 219 9.5E-92 T 14-10-2018 DA442_12800 f906f65ac86428713f372396bb26d105 242 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.122 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_22505 f341be260a2cdc4b8a6f4aea11e927ca 755 SUPERFAMILY SSF51445 273 648 1.06E-108 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DA442_22505 f341be260a2cdc4b8a6f4aea11e927ca 755 SMART SM00642 278 623 2.5E-6 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DA442_22505 f341be260a2cdc4b8a6f4aea11e927ca 755 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 143 751 9.3E-248 T 14-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 DA442_22505 f341be260a2cdc4b8a6f4aea11e927ca 755 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 119 754 41.525 T 14-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 DA442_22505 f341be260a2cdc4b8a6f4aea11e927ca 755 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 656 753 6.8E-17 T 14-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 DA442_22505 f341be260a2cdc4b8a6f4aea11e927ca 755 Pfam PF00128 Alpha amylase, catalytic domain 303 377 1.9E-6 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DA442_22505 f341be260a2cdc4b8a6f4aea11e927ca 755 SUPERFAMILY SSF51011 651 753 1.44E-28 T 14-10-2018 DA442_22505 f341be260a2cdc4b8a6f4aea11e927ca 755 PIRSF PIRSF000463 37 755 4.7E-287 T 14-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 DA442_22505 f341be260a2cdc4b8a6f4aea11e927ca 755 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 156 234 2.7E-19 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 DA442_22505 f341be260a2cdc4b8a6f4aea11e927ca 755 Gene3D G3DSA:3.20.20.80 262 640 1.7E-162 T 14-10-2018 DA442_22505 f341be260a2cdc4b8a6f4aea11e927ca 755 Gene3D G3DSA:2.60.40.1180 651 754 1.1E-30 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta DA442_22505 f341be260a2cdc4b8a6f4aea11e927ca 755 Gene3D G3DSA:2.60.40.10 33 248 8.3E-52 T 14-10-2018 IPR013783 Immunoglobulin-like fold DA442_22505 f341be260a2cdc4b8a6f4aea11e927ca 755 SUPERFAMILY SSF81296 144 254 1.33E-26 T 14-10-2018 IPR014756 Immunoglobulin E-set DA442_22505 f341be260a2cdc4b8a6f4aea11e927ca 755 SUPERFAMILY SSF81296 49 132 3.27E-12 T 14-10-2018 IPR014756 Immunoglobulin E-set DA442_19020 47a5ec675f096a3a241a47ad9f9b96b1 382 Gene3D G3DSA:3.40.50.1970 1 180 2.3E-50 T 14-10-2018 DA442_19020 47a5ec675f096a3a241a47ad9f9b96b1 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 357 1.6E-83 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 DA442_19020 47a5ec675f096a3a241a47ad9f9b96b1 382 SUPERFAMILY SSF56796 2 378 1.2E-98 T 14-10-2018 DA442_19020 47a5ec675f096a3a241a47ad9f9b96b1 382 Gene3D G3DSA:1.20.1090.10 181 380 8.0E-35 T 14-10-2018 DA442_20525 0feaa2c946cbc6788918b86069e8d986 288 SUPERFAMILY SSF82689 179 278 1.57E-27 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 DA442_20525 0feaa2c946cbc6788918b86069e8d986 288 SUPERFAMILY SSF50182 108 174 8.17E-18 T 14-10-2018 IPR010920 LSM domain superfamily DA442_20525 0feaa2c946cbc6788918b86069e8d986 288 Gene3D G3DSA:2.30.30.60 124 173 2.0E-13 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily DA442_20525 0feaa2c946cbc6788918b86069e8d986 288 SUPERFAMILY SSF82861 24 107 1.26E-11 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 DA442_20525 0feaa2c946cbc6788918b86069e8d986 288 Gene3D G3DSA:3.30.70.100 177 271 1.8E-24 T 14-10-2018 DA442_20525 0feaa2c946cbc6788918b86069e8d986 288 Pfam PF00924 Mechanosensitive ion channel 66 267 1.5E-50 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 DA442_05470 8770d2df336de8cc33236981df215c11 204 SMART SM00278 108 127 0.071 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DA442_05470 8770d2df336de8cc33236981df215c11 204 SMART SM00278 73 92 540.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DA442_05470 8770d2df336de8cc33236981df215c11 204 Pfam PF07499 RuvA, C-terminal domain 160 203 2.0E-17 T 14-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 DA442_05470 8770d2df336de8cc33236981df215c11 204 Gene3D G3DSA:2.40.50.140 1 65 5.9E-28 T 14-10-2018 DA442_05470 8770d2df336de8cc33236981df215c11 204 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 203 4.0E-65 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 DA442_05470 8770d2df336de8cc33236981df215c11 204 SUPERFAMILY SSF46929 158 203 8.89E-13 T 14-10-2018 IPR036267 RuvA, C-terminal domain superfamily DA442_05470 8770d2df336de8cc33236981df215c11 204 Pfam PF14520 Helix-hairpin-helix domain 72 130 4.6E-14 T 14-10-2018 DA442_05470 8770d2df336de8cc33236981df215c11 204 Pfam PF01330 RuvA N terminal domain 2 62 7.5E-21 T 14-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 DA442_05470 8770d2df336de8cc33236981df215c11 204 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 204 31.777 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 DA442_05470 8770d2df336de8cc33236981df215c11 204 Gene3D G3DSA:1.10.150.20 67 143 7.5E-26 T 14-10-2018 DA442_05470 8770d2df336de8cc33236981df215c11 204 SUPERFAMILY SSF50249 2 63 4.17E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_05470 8770d2df336de8cc33236981df215c11 204 Gene3D G3DSA:1.10.8.10 157 204 9.5E-25 T 14-10-2018 DA442_05470 8770d2df336de8cc33236981df215c11 204 SUPERFAMILY SSF47781 66 136 2.06E-19 T 14-10-2018 IPR010994 RuvA domain 2-like DA442_03315 88f77c144bfda689444925dc6a47057e 147 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 6.9E-31 T 14-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 DA442_03315 88f77c144bfda689444925dc6a47057e 147 SUPERFAMILY SSF55961 1 143 6.14E-34 T 14-10-2018 DA442_03315 88f77c144bfda689444925dc6a47057e 147 Gene3D G3DSA:3.30.530.20 1 143 3.0E-37 T 14-10-2018 IPR023393 START-like domain superfamily DA442_00320 9ee5c3026ee376dcf72f42928aafd998 109 Pfam PF00893 Small Multidrug Resistance protein 7 99 6.8E-19 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 DA442_00320 9ee5c3026ee376dcf72f42928aafd998 109 Gene3D G3DSA:1.10.3730.20 7 109 2.9E-21 T 14-10-2018 DA442_00320 9ee5c3026ee376dcf72f42928aafd998 109 SUPERFAMILY SSF103481 12 107 5.89E-15 T 14-10-2018 DA442_21565 525b94f425b2a3ec3b824df2abd3ad9a 410 PIRSF PIRSF001480 18 410 6.9E-100 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DA442_21565 525b94f425b2a3ec3b824df2abd3ad9a 410 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 276 301 - T 14-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DA442_21565 525b94f425b2a3ec3b824df2abd3ad9a 410 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 21 402 1.4E-88 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DA442_21565 525b94f425b2a3ec3b824df2abd3ad9a 410 Gene3D G3DSA:2.60.120.10 26 296 2.3E-129 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DA442_21565 525b94f425b2a3ec3b824df2abd3ad9a 410 SUPERFAMILY SSF51182 19 396 2.02E-103 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DA442_21565 525b94f425b2a3ec3b824df2abd3ad9a 410 Pfam PF01238 Phosphomannose isomerase type I 23 381 3.6E-87 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DA442_21565 525b94f425b2a3ec3b824df2abd3ad9a 410 Gene3D G3DSA:1.10.441.10 169 321 2.3E-129 T 14-10-2018 DA442_21565 525b94f425b2a3ec3b824df2abd3ad9a 410 PRINTS PR00714 Phosphomannose isomerase type I signature 24 42 2.2E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DA442_21565 525b94f425b2a3ec3b824df2abd3ad9a 410 PRINTS PR00714 Phosphomannose isomerase type I signature 276 295 2.2E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DA442_21565 525b94f425b2a3ec3b824df2abd3ad9a 410 PRINTS PR00714 Phosphomannose isomerase type I signature 52 67 2.2E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DA442_21565 525b94f425b2a3ec3b824df2abd3ad9a 410 PRINTS PR00714 Phosphomannose isomerase type I signature 145 168 2.2E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DA442_21565 525b94f425b2a3ec3b824df2abd3ad9a 410 PRINTS PR00714 Phosphomannose isomerase type I signature 100 121 2.2E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DA442_21565 525b94f425b2a3ec3b824df2abd3ad9a 410 PRINTS PR00714 Phosphomannose isomerase type I signature 241 256 2.2E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DA442_21565 525b94f425b2a3ec3b824df2abd3ad9a 410 PRINTS PR00714 Phosphomannose isomerase type I signature 295 314 2.2E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DA442_21565 525b94f425b2a3ec3b824df2abd3ad9a 410 PRINTS PR00714 Phosphomannose isomerase type I signature 257 276 2.2E-69 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DA442_21565 525b94f425b2a3ec3b824df2abd3ad9a 410 Gene3D G3DSA:2.60.120.10 322 403 2.3E-129 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DA442_21565 525b94f425b2a3ec3b824df2abd3ad9a 410 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 145 153 - T 14-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DA442_11085 3df73cd9f8476fdb90ce31edcabf243f 187 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 177 1.3E-62 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 DA442_11085 3df73cd9f8476fdb90ce31edcabf243f 187 Pfam PF04279 Intracellular septation protein A 1 174 1.5E-66 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 DA442_11085 3df73cd9f8476fdb90ce31edcabf243f 187 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 175 18.39 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 DA442_18110 43ca5bc2367edd991cfce67375cc594c 327 Pfam PF02780 Transketolase, C-terminal domain 198 315 7.4E-36 T 14-10-2018 IPR033248 Transketolase, C-terminal domain DA442_18110 43ca5bc2367edd991cfce67375cc594c 327 SUPERFAMILY SSF52518 4 190 1.5E-64 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DA442_18110 43ca5bc2367edd991cfce67375cc594c 327 SUPERFAMILY SSF52922 190 323 6.94E-37 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DA442_18110 43ca5bc2367edd991cfce67375cc594c 327 Gene3D G3DSA:3.40.50.970 1 191 9.8E-75 T 14-10-2018 DA442_18110 43ca5bc2367edd991cfce67375cc594c 327 Gene3D G3DSA:3.40.50.920 192 325 2.9E-41 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DA442_18110 43ca5bc2367edd991cfce67375cc594c 327 SMART SM00861 4 179 1.4E-62 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DA442_18110 43ca5bc2367edd991cfce67375cc594c 327 Pfam PF02779 Transketolase, pyrimidine binding domain 4 178 4.8E-48 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DA442_22095 0fedfaf623d9b3f7085b1627c1066bce 345 Gene3D G3DSA:2.40.10.10 48 277 7.5E-54 T 14-10-2018 DA442_22095 0fedfaf623d9b3f7085b1627c1066bce 345 SUPERFAMILY SSF50494 9 280 1.24E-58 T 14-10-2018 IPR009003 Peptidase S1, PA clan DA442_22095 0fedfaf623d9b3f7085b1627c1066bce 345 SMART SM00020 35 276 2.0E-50 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 DA442_22095 0fedfaf623d9b3f7085b1627c1066bce 345 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 132 146 2.0E-12 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 DA442_22095 0fedfaf623d9b3f7085b1627c1066bce 345 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 68 83 2.0E-12 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 DA442_22095 0fedfaf623d9b3f7085b1627c1066bce 345 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 224 236 2.0E-12 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 DA442_22095 0fedfaf623d9b3f7085b1627c1066bce 345 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 78 83 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 DA442_22095 0fedfaf623d9b3f7085b1627c1066bce 345 Pfam PF00089 Trypsin 36 276 9.3E-42 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 DA442_22095 0fedfaf623d9b3f7085b1627c1066bce 345 Gene3D G3DSA:2.40.10.10 26 270 7.5E-54 T 14-10-2018 DA442_22095 0fedfaf623d9b3f7085b1627c1066bce 345 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 225 236 - T 14-10-2018 IPR033116 Serine proteases, trypsin family, serine active site DA442_22155 44d8e8be8637302503948c19885fddb1 89 Pfam PF01313 Bacterial export proteins, family 3 7 77 1.6E-25 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DA442_22155 44d8e8be8637302503948c19885fddb1 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 3.0E-13 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DA442_22155 44d8e8be8637302503948c19885fddb1 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 3.0E-13 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DA442_22155 44d8e8be8637302503948c19885fddb1 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 3.0E-13 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DA442_22155 44d8e8be8637302503948c19885fddb1 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 1.3E-28 T 14-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 DA442_22155 44d8e8be8637302503948c19885fddb1 89 PIRSF PIRSF004669 1 89 1.4E-25 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DA442_17450 ea0c1e80bc784e305d3aa542c7f5d952 453 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 451 1.7E-205 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 DA442_17450 ea0c1e80bc784e305d3aa542c7f5d952 453 Gene3D G3DSA:3.90.550.10 1 224 5.1E-68 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DA442_17450 ea0c1e80bc784e305d3aa542c7f5d952 453 SUPERFAMILY SSF53448 1 249 1.59E-63 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DA442_17450 ea0c1e80bc784e305d3aa542c7f5d952 453 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 42.632 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 DA442_17450 ea0c1e80bc784e305d3aa542c7f5d952 453 SUPERFAMILY SSF51161 252 434 1.14E-51 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily DA442_17450 ea0c1e80bc784e305d3aa542c7f5d952 453 Gene3D G3DSA:2.160.10.10 225 453 9.3E-72 T 14-10-2018 DA442_17450 ea0c1e80bc784e305d3aa542c7f5d952 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 314 348 3.0E-4 T 14-10-2018 IPR001451 Hexapeptide repeat DA442_17450 ea0c1e80bc784e305d3aa542c7f5d952 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 392 426 1.7E-7 T 14-10-2018 IPR001451 Hexapeptide repeat DA442_17450 ea0c1e80bc784e305d3aa542c7f5d952 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 265 296 9.1E-7 T 14-10-2018 IPR001451 Hexapeptide repeat DA442_17450 ea0c1e80bc784e305d3aa542c7f5d952 453 Pfam PF12804 MobA-like NTP transferase domain 5 121 2.4E-22 T 14-10-2018 IPR025877 MobA-like NTP transferase DA442_17450 ea0c1e80bc784e305d3aa542c7f5d952 453 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 400 428 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DA442_22050 3a621b2ef6e035a4ceae0aa652ddb584 309 Gene3D G3DSA:3.40.190.10 169 270 3.5E-57 T 14-10-2018 DA442_22050 3a621b2ef6e035a4ceae0aa652ddb584 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 2.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_22050 3a621b2ef6e035a4ceae0aa652ddb584 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 2.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_22050 3a621b2ef6e035a4ceae0aa652ddb584 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 2.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_22050 3a621b2ef6e035a4ceae0aa652ddb584 309 Gene3D G3DSA:3.40.190.10 98 298 3.5E-57 T 14-10-2018 DA442_22050 3a621b2ef6e035a4ceae0aa652ddb584 309 Pfam PF03466 LysR substrate binding domain 94 301 5.0E-39 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_22050 3a621b2ef6e035a4ceae0aa652ddb584 309 SUPERFAMILY SSF46785 10 116 6.82E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_22050 3a621b2ef6e035a4ceae0aa652ddb584 309 Gene3D G3DSA:1.10.10.10 9 95 5.9E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_22050 3a621b2ef6e035a4ceae0aa652ddb584 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 3.8E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_22050 3a621b2ef6e035a4ceae0aa652ddb584 309 SUPERFAMILY SSF53850 95 301 4.71E-38 T 14-10-2018 DA442_00060 7fd6a24837091f8c0b4c2fb703898e54 305 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 302 2.4E-170 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DA442_00060 7fd6a24837091f8c0b4c2fb703898e54 305 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 294 61.667 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DA442_00060 7fd6a24837091f8c0b4c2fb703898e54 305 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 293 9.7E-149 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DA442_00060 7fd6a24837091f8c0b4c2fb703898e54 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 2.7E-70 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DA442_00060 7fd6a24837091f8c0b4c2fb703898e54 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 2.7E-70 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DA442_00060 7fd6a24837091f8c0b4c2fb703898e54 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 254 270 2.7E-70 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DA442_00060 7fd6a24837091f8c0b4c2fb703898e54 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 2.7E-70 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DA442_00060 7fd6a24837091f8c0b4c2fb703898e54 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 2.7E-70 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DA442_00060 7fd6a24837091f8c0b4c2fb703898e54 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 2.7E-70 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DA442_00060 7fd6a24837091f8c0b4c2fb703898e54 305 Gene3D G3DSA:3.30.930.10 1 215 4.5E-110 T 14-10-2018 DA442_00060 7fd6a24837091f8c0b4c2fb703898e54 305 Gene3D G3DSA:1.20.58.180 216 298 8.4E-34 T 14-10-2018 DA442_00060 7fd6a24837091f8c0b4c2fb703898e54 305 SUPERFAMILY SSF55681 8 293 5.14E-132 T 14-10-2018 DA442_06860 582d383c8979b20447441b0dcb05a9c6 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 266 3.0E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DA442_06860 582d383c8979b20447441b0dcb05a9c6 282 Gene3D G3DSA:1.10.3720.10 13 278 4.7E-53 T 14-10-2018 IPR035906 MetI-like superfamily DA442_06860 582d383c8979b20447441b0dcb05a9c6 282 SUPERFAMILY SSF161098 10 279 2.99E-57 T 14-10-2018 IPR035906 MetI-like superfamily DA442_19960 090fa4d0b4a978b1e7a637179b35a144 377 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 268 353 4.4E-11 T 14-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain DA442_19960 090fa4d0b4a978b1e7a637179b35a144 377 Gene3D G3DSA:3.60.21.10 1 266 2.7E-80 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like DA442_19960 090fa4d0b4a978b1e7a637179b35a144 377 Pfam PF00149 Calcineurin-like phosphoesterase 1 218 1.3E-18 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DA442_19960 090fa4d0b4a978b1e7a637179b35a144 377 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 245 4.3E-58 T 14-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 DA442_19960 090fa4d0b4a978b1e7a637179b35a144 377 SUPERFAMILY SSF56300 1 320 8.51E-62 T 14-10-2018 DA442_18430 ff9d7abdce2c9f98708cd4fe81d6a857 393 Gene3D G3DSA:3.90.1150.10 21 382 3.3E-140 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DA442_18430 ff9d7abdce2c9f98708cd4fe81d6a857 393 Pfam PF00155 Aminotransferase class I and II 45 379 1.8E-28 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DA442_18430 ff9d7abdce2c9f98708cd4fe81d6a857 393 Gene3D G3DSA:3.40.640.10 59 290 3.3E-140 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_18430 ff9d7abdce2c9f98708cd4fe81d6a857 393 SUPERFAMILY SSF53383 36 387 1.9E-72 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_04115 a860373c7a25bb6680408aba2fd72550 259 PRINTS PR01008 Flagellar L-ring protein signature 222 236 6.6E-21 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 DA442_04115 a860373c7a25bb6680408aba2fd72550 259 PRINTS PR01008 Flagellar L-ring protein signature 201 217 6.6E-21 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 DA442_04115 a860373c7a25bb6680408aba2fd72550 259 PRINTS PR01008 Flagellar L-ring protein signature 238 252 6.6E-21 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 DA442_04115 a860373c7a25bb6680408aba2fd72550 259 PRINTS PR01008 Flagellar L-ring protein signature 102 114 6.6E-21 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 DA442_04115 a860373c7a25bb6680408aba2fd72550 259 PRINTS PR01008 Flagellar L-ring protein signature 175 190 6.6E-21 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 DA442_04115 a860373c7a25bb6680408aba2fd72550 259 Pfam PF02107 Flagellar L-ring protein 80 257 1.8E-56 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 DA442_04115 a860373c7a25bb6680408aba2fd72550 259 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 259 27.546 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 DA442_24035 5fc99c2853478e70617ab79a7916d168 244 SUPERFAMILY SSF52540 5 227 2.3E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_24035 5fc99c2853478e70617ab79a7916d168 244 Pfam PF00005 ABC transporter 21 166 8.0E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_24035 5fc99c2853478e70617ab79a7916d168 244 SMART SM00382 30 214 5.5E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_24035 5fc99c2853478e70617ab79a7916d168 244 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_24035 5fc99c2853478e70617ab79a7916d168 244 Gene3D G3DSA:3.40.50.300 3 243 2.6E-54 T 14-10-2018 DA442_22685 69c8a1cdf23a15f4395eadc47c5d5ca8 323 Pfam PF01032 FecCD transport family 13 319 5.9E-94 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DA442_22685 69c8a1cdf23a15f4395eadc47c5d5ca8 323 Gene3D G3DSA:1.10.3470.10 2 322 1.2E-96 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DA442_22685 69c8a1cdf23a15f4395eadc47c5d5ca8 323 SUPERFAMILY SSF81345 5 319 1.18E-80 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DA442_14875 b62ad4d63fd8c8ebc6d75b4b6863a62e 541 SMART SM00283 277 538 1.8E-70 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_14875 b62ad4d63fd8c8ebc6d75b4b6863a62e 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 3.0E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DA442_14875 b62ad4d63fd8c8ebc6d75b4b6863a62e 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 402 3.0E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DA442_14875 b62ad4d63fd8c8ebc6d75b4b6863a62e 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 3 28 3.0E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DA442_14875 b62ad4d63fd8c8ebc6d75b4b6863a62e 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 326 502 1.5E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_14875 b62ad4d63fd8c8ebc6d75b4b6863a62e 541 Pfam PF17200 Single Cache domain 2 36 185 3.7E-34 T 14-10-2018 IPR033480 Single Cache domain 2 DA442_14875 b62ad4d63fd8c8ebc6d75b4b6863a62e 541 SMART SM01049 30 124 8.3E-20 T 14-10-2018 IPR033480 Single Cache domain 2 DA442_14875 b62ad4d63fd8c8ebc6d75b4b6863a62e 541 Gene3D G3DSA:1.10.287.950 218 540 9.8E-65 T 14-10-2018 DA442_14875 b62ad4d63fd8c8ebc6d75b4b6863a62e 541 Gene3D G3DSA:3.30.450.20 33 186 7.3E-31 T 14-10-2018 DA442_14875 b62ad4d63fd8c8ebc6d75b4b6863a62e 541 SUPERFAMILY SSF58104 246 539 1.83E-69 T 14-10-2018 DA442_25515 91adef5ac61d4a6f72edd5753219218f 523 SMART SM00382 28 215 4.8E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_25515 91adef5ac61d4a6f72edd5753219218f 523 SMART SM00382 360 521 4.9E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_25515 91adef5ac61d4a6f72edd5753219218f 523 Gene3D G3DSA:3.40.50.300 2 267 4.7E-41 T 14-10-2018 DA442_25515 91adef5ac61d4a6f72edd5753219218f 523 SUPERFAMILY SSF52540 3 236 2.53E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_25515 91adef5ac61d4a6f72edd5753219218f 523 SUPERFAMILY SSF52540 354 512 8.27E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_25515 91adef5ac61d4a6f72edd5753219218f 523 Pfam PF00005 ABC transporter 353 480 1.1E-14 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_25515 91adef5ac61d4a6f72edd5753219218f 523 Pfam PF00005 ABC transporter 29 170 2.8E-16 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_25515 91adef5ac61d4a6f72edd5753219218f 523 Gene3D G3DSA:3.40.50.300 297 521 3.2E-33 T 14-10-2018 DA442_10380 e2a75061d7e3b486154294e6673722dd 157 SUPERFAMILY SSF55729 17 137 5.75E-15 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_10380 e2a75061d7e3b486154294e6673722dd 157 Gene3D G3DSA:3.40.630.30 15 137 4.6E-16 T 14-10-2018 DA442_10380 e2a75061d7e3b486154294e6673722dd 157 Pfam PF13673 Acetyltransferase (GNAT) domain 46 132 1.4E-11 T 14-10-2018 IPR000182 GNAT domain DA442_12465 b25c92f1dab93c4406128fe71a4cab2a 488 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 349 358 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site DA442_12465 b25c92f1dab93c4406128fe71a4cab2a 488 SMART SM00382 157 301 5.8E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_12465 b25c92f1dab93c4406128fe71a4cab2a 488 Pfam PF00158 Sigma-54 interaction domain 137 304 1.3E-72 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DA442_12465 b25c92f1dab93c4406128fe71a4cab2a 488 SUPERFAMILY SSF52172 6 182 5.09E-5 T 14-10-2018 IPR011006 CheY-like superfamily DA442_12465 b25c92f1dab93c4406128fe71a4cab2a 488 Gene3D G3DSA:3.40.50.300 125 308 4.5E-66 T 14-10-2018 DA442_12465 b25c92f1dab93c4406128fe71a4cab2a 488 Gene3D G3DSA:3.40.50.2300 1 117 1.1E-9 T 14-10-2018 DA442_12465 b25c92f1dab93c4406128fe71a4cab2a 488 Gene3D G3DSA:1.10.10.60 421 488 2.7E-13 T 14-10-2018 DA442_12465 b25c92f1dab93c4406128fe71a4cab2a 488 SUPERFAMILY SSF52540 137 378 2.07E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_12465 b25c92f1dab93c4406128fe71a4cab2a 488 Pfam PF06490 Flagellar regulatory protein FleQ 6 114 3.5E-30 T 14-10-2018 IPR010518 Flagellar regulatory FleQ DA442_12465 b25c92f1dab93c4406128fe71a4cab2a 488 Pfam PF02954 Bacterial regulatory protein, Fis family 444 484 1.0E-14 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DA442_12465 b25c92f1dab93c4406128fe71a4cab2a 488 Gene3D G3DSA:1.10.8.60 309 385 7.0E-25 T 14-10-2018 DA442_12465 b25c92f1dab93c4406128fe71a4cab2a 488 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DA442_12465 b25c92f1dab93c4406128fe71a4cab2a 488 SUPERFAMILY SSF46689 349 486 7.17E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_12465 b25c92f1dab93c4406128fe71a4cab2a 488 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 450 467 1.3E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DA442_12465 b25c92f1dab93c4406128fe71a4cab2a 488 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 467 487 1.3E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DA442_12465 b25c92f1dab93c4406128fe71a4cab2a 488 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DA442_08765 c39c3d8ca80e386a0df0c0cf9985a93f 200 SUPERFAMILY SSF46689 2 80 3.06E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_08765 c39c3d8ca80e386a0df0c0cf9985a93f 200 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 146 198 3.2E-10 T 14-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type DA442_08765 c39c3d8ca80e386a0df0c0cf9985a93f 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 1.6E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DA442_08765 c39c3d8ca80e386a0df0c0cf9985a93f 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 1.6E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DA442_08765 c39c3d8ca80e386a0df0c0cf9985a93f 200 Gene3D G3DSA:1.10.10.60 2 58 3.8E-21 T 14-10-2018 DA442_08765 c39c3d8ca80e386a0df0c0cf9985a93f 200 Gene3D G3DSA:1.10.357.10 62 197 3.4E-26 T 14-10-2018 DA442_08765 c39c3d8ca80e386a0df0c0cf9985a93f 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 6.2E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DA442_16730 cbd8759373c58a478b09a74eb66eabcd 369 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 10 368 7.9E-194 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 DA442_16730 cbd8759373c58a478b09a74eb66eabcd 369 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 301 330 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site DA442_16730 cbd8759373c58a478b09a74eb66eabcd 369 SUPERFAMILY SSF53335 10 367 2.33E-57 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_16730 cbd8759373c58a478b09a74eb66eabcd 369 Gene3D G3DSA:3.40.50.150 13 364 2.0E-141 T 14-10-2018 DA442_16730 cbd8759373c58a478b09a74eb66eabcd 369 Gene3D G3DSA:3.40.1350.30 45 189 2.0E-141 T 14-10-2018 DA442_16730 cbd8759373c58a478b09a74eb66eabcd 369 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 350 360 - T 14-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site DA442_16730 cbd8759373c58a478b09a74eb66eabcd 369 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 11 368 5.5E-190 T 14-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 DA442_16730 cbd8759373c58a478b09a74eb66eabcd 369 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 368 45.216 T 14-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 DA442_04135 0b6fc79ef6c2da143b0a7d090a3ac29f 397 SUPERFAMILY SSF64518 3 397 2.09E-68 T 14-10-2018 DA442_04135 0b6fc79ef6c2da143b0a7d090a3ac29f 397 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 4 397 3.7E-94 T 14-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 DA442_04135 0b6fc79ef6c2da143b0a7d090a3ac29f 397 Gene3D G3DSA:1.20.1330.10 267 372 4.4E-10 T 14-10-2018 DA442_04135 0b6fc79ef6c2da143b0a7d090a3ac29f 397 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 2.1E-12 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DA442_04135 0b6fc79ef6c2da143b0a7d090a3ac29f 397 Gene3D G3DSA:1.20.1330.10 42 233 4.6E-33 T 14-10-2018 DA442_11035 13de2619ec4466a2dab53964b665b78e 396 SUPERFAMILY SSF53686 5 387 2.88E-142 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DA442_11035 13de2619ec4466a2dab53964b665b78e 396 Gene3D G3DSA:3.40.50.1100 9 204 5.4E-184 T 14-10-2018 DA442_11035 13de2619ec4466a2dab53964b665b78e 396 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 6 388 3.1E-195 T 14-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DA442_11035 13de2619ec4466a2dab53964b665b78e 396 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 373 1.9E-49 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DA442_11035 13de2619ec4466a2dab53964b665b78e 396 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 14-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DA442_11035 13de2619ec4466a2dab53964b665b78e 396 PIRSF PIRSF001413 1 395 1.5E-168 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DA442_11035 13de2619ec4466a2dab53964b665b78e 396 Gene3D G3DSA:3.40.50.1100 53 383 5.4E-184 T 14-10-2018 DA442_11035 13de2619ec4466a2dab53964b665b78e 396 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 50.053 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DA442_02445 314fc721af5109515e83594631336930 206 Pfam PF03458 UPF0126 domain 95 166 5.5E-19 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 DA442_02445 314fc721af5109515e83594631336930 206 Pfam PF03458 UPF0126 domain 8 81 4.7E-22 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 DA442_15700 34ad884c109d08c7349ddc86ed8fb996 802 Gene3D G3DSA:1.20.120.1320 44 137 1.9E-73 T 14-10-2018 DA442_15700 34ad884c109d08c7349ddc86ed8fb996 802 Gene3D G3DSA:3.30.360.10 611 781 1.3E-103 T 14-10-2018 DA442_15700 34ad884c109d08c7349ddc86ed8fb996 802 Pfam PF00742 Homoserine dehydrogenase 600 795 4.1E-43 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 DA442_15700 34ad884c109d08c7349ddc86ed8fb996 802 PIRSF PIRSF000727 5 802 9.4E-288 T 14-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DA442_15700 34ad884c109d08c7349ddc86ed8fb996 802 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DA442_15700 34ad884c109d08c7349ddc86ed8fb996 802 Pfam PF00696 Amino acid kinase family 5 271 3.3E-43 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DA442_15700 34ad884c109d08c7349ddc86ed8fb996 802 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 646 668 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 DA442_15700 34ad884c109d08c7349ddc86ed8fb996 802 Gene3D G3DSA:3.40.1160.10 8 290 1.9E-73 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DA442_15700 34ad884c109d08c7349ddc86ed8fb996 802 Gene3D G3DSA:3.30.70.260 381 443 9.4E-6 T 14-10-2018 DA442_15700 34ad884c109d08c7349ddc86ed8fb996 802 Gene3D G3DSA:3.30.70.260 366 380 9.4E-6 T 14-10-2018 DA442_15700 34ad884c109d08c7349ddc86ed8fb996 802 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 8 445 1.6E-65 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DA442_15700 34ad884c109d08c7349ddc86ed8fb996 802 SUPERFAMILY SSF55347 600 783 7.19E-45 T 14-10-2018 DA442_15700 34ad884c109d08c7349ddc86ed8fb996 802 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 457 592 3.8E-15 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 DA442_15700 34ad884c109d08c7349ddc86ed8fb996 802 Gene3D G3DSA:3.40.50.720 451 798 1.3E-103 T 14-10-2018 DA442_15700 34ad884c109d08c7349ddc86ed8fb996 802 SUPERFAMILY SSF51735 448 622 2.23E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_15700 34ad884c109d08c7349ddc86ed8fb996 802 SUPERFAMILY SSF53633 5 291 1.83E-57 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DA442_11995 ed0d5e0c66d52390c8a2fa11bc24bbca 315 Gene3D G3DSA:3.40.50.11550 45 268 3.8E-28 T 14-10-2018 DA442_11995 ed0d5e0c66d52390c8a2fa11bc24bbca 315 SUPERFAMILY SSF159501 32 282 9.94E-75 T 14-10-2018 DA442_11995 ed0d5e0c66d52390c8a2fa11bc24bbca 315 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 55 255 3.6E-60 T 14-10-2018 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN DA442_11995 ed0d5e0c66d52390c8a2fa11bc24bbca 315 Gene3D G3DSA:1.10.8.760 155 219 3.8E-28 T 14-10-2018 DA442_11995 ed0d5e0c66d52390c8a2fa11bc24bbca 315 PIRSF PIRSF020419 1 299 5.8E-77 T 14-10-2018 IPR016773 Ferric uptake regulator, CjrA, predicted DA442_10755 6a633a2ba90ce305e00824cdad999f02 454 PIRSF PIRSF037314 1 454 5.9E-191 T 14-10-2018 IPR017171 Signal transduction histidine kinase, MctS DA442_10755 6a633a2ba90ce305e00824cdad999f02 454 Gene3D G3DSA:3.30.565.10 313 448 1.8E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_10755 6a633a2ba90ce305e00824cdad999f02 454 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 446 4.6E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_10755 6a633a2ba90ce305e00824cdad999f02 454 Gene3D G3DSA:3.30.450.20 28 203 7.3E-47 T 14-10-2018 DA442_10755 6a633a2ba90ce305e00824cdad999f02 454 SUPERFAMILY SSF55874 320 443 1.18E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_10755 6a633a2ba90ce305e00824cdad999f02 454 SMART SM01049 42 133 3.1E-31 T 14-10-2018 IPR033480 Single Cache domain 2 DA442_10755 6a633a2ba90ce305e00824cdad999f02 454 Pfam PF07730 Histidine kinase 250 315 5.0E-14 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 DA442_10755 6a633a2ba90ce305e00824cdad999f02 454 Pfam PF17200 Single Cache domain 2 45 192 1.2E-40 T 14-10-2018 IPR033480 Single Cache domain 2 DA442_10755 6a633a2ba90ce305e00824cdad999f02 454 SMART SM00387 353 447 9.7E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_24085 0c422a22ac0157e9324551e494e6dc67 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 52.494 T 14-10-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK DA442_24085 0c422a22ac0157e9324551e494e6dc67 301 Gene3D G3DSA:3.40.50.20 1 114 2.2E-40 T 14-10-2018 DA442_24085 0c422a22ac0157e9324551e494e6dc67 301 Gene3D G3DSA:3.30.470.80 182 299 1.0E-42 T 14-10-2018 DA442_24085 0c422a22ac0157e9324551e494e6dc67 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 3 286 1.4E-84 T 14-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 DA442_24085 0c422a22ac0157e9324551e494e6dc67 301 Pfam PF08443 RimK-like ATP-grasp domain 98 286 6.0E-67 T 14-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 DA442_24085 0c422a22ac0157e9324551e494e6dc67 301 SUPERFAMILY SSF56059 98 288 7.07E-51 T 14-10-2018 DA442_24085 0c422a22ac0157e9324551e494e6dc67 301 Gene3D G3DSA:3.30.1490.20 115 181 1.9E-26 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DA442_23120 3d122403ff32293806d763495ba9832b 189 SUPERFAMILY SSF52218 1 186 1.57E-44 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DA442_23120 3d122403ff32293806d763495ba9832b 189 Gene3D G3DSA:3.40.50.360 1 188 2.7E-51 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DA442_23120 3d122403ff32293806d763495ba9832b 189 Pfam PF03358 NADPH-dependent FMN reductase 3 132 6.7E-14 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 DA442_00650 a713e161987e7f3d71086eaf9765303c 213 Pfam PF11172 Protein of unknown function (DUF2959) 13 210 1.7E-90 T 14-10-2018 IPR021342 Protein of unknown function DUF2959 DA442_21905 317357a99fc49f1f794544b993f8cb46 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 706 724 1.2E-6 T 14-10-2018 DA442_21905 317357a99fc49f1f794544b993f8cb46 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 676 695 1.2E-6 T 14-10-2018 DA442_21905 317357a99fc49f1f794544b993f8cb46 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 646 665 1.2E-6 T 14-10-2018 DA442_21905 317357a99fc49f1f794544b993f8cb46 786 Gene3D G3DSA:1.10.8.60 450 537 2.4E-13 T 14-10-2018 DA442_21905 317357a99fc49f1f794544b993f8cb46 786 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 649 752 4.2E-9 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 DA442_21905 317357a99fc49f1f794544b993f8cb46 786 SUPERFAMILY SSF54211 564 756 3.3E-35 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DA442_21905 317357a99fc49f1f794544b993f8cb46 786 Gene3D G3DSA:3.40.50.300 5 173 2.3E-27 T 14-10-2018 DA442_21905 317357a99fc49f1f794544b993f8cb46 786 Gene3D G3DSA:3.40.50.300 243 449 3.8E-56 T 14-10-2018 DA442_21905 317357a99fc49f1f794544b993f8cb46 786 Pfam PF13654 AAA domain 25 539 1.8E-185 T 14-10-2018 DA442_21905 317357a99fc49f1f794544b993f8cb46 786 SUPERFAMILY SSF52540 30 546 6.73E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_21905 317357a99fc49f1f794544b993f8cb46 786 Gene3D G3DSA:3.30.230.10 541 767 1.5E-90 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DA442_15160 52042bc138372e7a73b424410dce1230 241 SUPERFAMILY SSF52540 3 237 4.97E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_15160 52042bc138372e7a73b424410dce1230 241 SMART SM00382 28 231 2.4E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_15160 52042bc138372e7a73b424410dce1230 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 241 4.0E-126 T 14-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 DA442_15160 52042bc138372e7a73b424410dce1230 241 Gene3D G3DSA:3.40.50.300 2 241 1.5E-72 T 14-10-2018 DA442_15160 52042bc138372e7a73b424410dce1230 241 Pfam PF00005 ABC transporter 20 166 9.8E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_15160 52042bc138372e7a73b424410dce1230 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_15160 52042bc138372e7a73b424410dce1230 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 236 4.6E-9 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal DA442_15915 5472781123e9c7b53c23a0e92f863281 835 SMART SM00955 267 595 1.1E-185 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 DA442_15915 5472781123e9c7b53c23a0e92f863281 835 SUPERFAMILY SSF50249 145 244 2.1E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_15915 5472781123e9c7b53c23a0e92f863281 835 Pfam PF08206 Ribonuclease B OB domain 91 151 5.3E-22 T 14-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain DA442_15915 5472781123e9c7b53c23a0e92f863281 835 Pfam PF00773 RNB domain 267 594 6.8E-109 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 DA442_15915 5472781123e9c7b53c23a0e92f863281 835 SUPERFAMILY SSF50249 71 154 1.46E-15 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_15915 5472781123e9c7b53c23a0e92f863281 835 Pfam PF00575 S1 RNA binding domain 650 731 1.3E-13 T 14-10-2018 IPR003029 S1 domain GO:0003676 DA442_15915 5472781123e9c7b53c23a0e92f863281 835 SMART SM00357 90 152 3.6E-14 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 DA442_15915 5472781123e9c7b53c23a0e92f863281 835 Pfam PF08461 Ribonuclease R winged-helix domain 27 88 6.9E-12 T 14-10-2018 IPR013668 Ribonuclease R winged-helix domain DA442_15915 5472781123e9c7b53c23a0e92f863281 835 Gene3D G3DSA:2.40.50.140 653 764 3.6E-27 T 14-10-2018 DA442_15915 5472781123e9c7b53c23a0e92f863281 835 SUPERFAMILY SSF50249 651 742 2.31E-22 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_15915 5472781123e9c7b53c23a0e92f863281 835 SMART SM00316 650 733 6.9E-15 T 14-10-2018 IPR022967 RNA-binding domain, S1 DA442_15915 5472781123e9c7b53c23a0e92f863281 835 SUPERFAMILY SSF50249 227 650 5.6E-144 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_15915 5472781123e9c7b53c23a0e92f863281 835 TIGRFAM TIGR02063 RNase_R: ribonuclease R 23 734 4.4E-275 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 DA442_15915 5472781123e9c7b53c23a0e92f863281 835 Gene3D G3DSA:2.40.50.140 77 155 1.3E-11 T 14-10-2018 DA442_15915 5472781123e9c7b53c23a0e92f863281 835 ProSitePatterns PS01175 Ribonuclease II family signature. 562 586 - T 14-10-2018 IPR022966 Ribonuclease II/R, conserved site DA442_15915 5472781123e9c7b53c23a0e92f863281 835 Hamap MF_01895 Ribonuclease R [rnr]. 42 733 59.306 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 DA442_15915 5472781123e9c7b53c23a0e92f863281 835 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 71 733 8.9E-257 T 14-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 DA442_14090 53a1b436190fa28f64cfab2b9beb5461 409 SUPERFAMILY SSF111352 12 383 4.58E-105 T 14-10-2018 DA442_14090 53a1b436190fa28f64cfab2b9beb5461 409 ProSitePatterns PS01219 Ammonium transporters signature. 163 188 - T 14-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 DA442_14090 53a1b436190fa28f64cfab2b9beb5461 409 Gene3D G3DSA:1.10.3430.10 2 408 1.1E-118 T 14-10-2018 IPR029020 Ammonium/urea transporter DA442_14090 53a1b436190fa28f64cfab2b9beb5461 409 TIGRFAM TIGR03644 marine_trans_1: probable ammonium transporter, marine subtype 12 405 9.8E-205 T 14-10-2018 IPR019879 Ammonium transporter, marine subtype DA442_14090 53a1b436190fa28f64cfab2b9beb5461 409 Pfam PF00909 Ammonium Transporter Family 18 402 6.0E-101 T 14-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 DA442_20865 3df1774bc93054da09fe842f930fbdcf 578 SUPERFAMILY SSF55874 447 567 1.96E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_20865 3df1774bc93054da09fe842f930fbdcf 578 Gene3D G3DSA:3.30.565.10 438 575 5.9E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_20865 3df1774bc93054da09fe842f930fbdcf 578 Gene3D G3DSA:1.10.287.130 176 281 2.7E-6 T 14-10-2018 DA442_20865 3df1774bc93054da09fe842f930fbdcf 578 SMART SM00304 176 228 4.2E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_20865 3df1774bc93054da09fe842f930fbdcf 578 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 34 128 1.2E-21 T 14-10-2018 IPR029095 NarX-like, N-terminal DA442_20865 3df1774bc93054da09fe842f930fbdcf 578 PIRSF PIRSF003167 2 577 7.6E-179 T 14-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 DA442_20865 3df1774bc93054da09fe842f930fbdcf 578 Gene3D G3DSA:1.20.120.960 40 148 1.9E-11 T 14-10-2018 DA442_20865 3df1774bc93054da09fe842f930fbdcf 578 Pfam PF07730 Histidine kinase 369 437 7.5E-17 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 DA442_20865 3df1774bc93054da09fe842f930fbdcf 578 SUPERFAMILY SSF158472 178 225 8.63E-8 T 14-10-2018 DA442_20865 3df1774bc93054da09fe842f930fbdcf 578 SMART SM00387 478 571 9.4E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_20865 3df1774bc93054da09fe842f930fbdcf 578 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 480 568 3.6E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_15595 dac910298eac6071c0d60d4aa4c1e878 505 Gene3D G3DSA:3.30.70.1070 405 502 1.4E-26 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 DA442_15595 dac910298eac6071c0d60d4aa4c1e878 505 Pfam PF05036 Sporulation related domain 418 491 4.1E-8 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 DA442_15595 dac910298eac6071c0d60d4aa4c1e878 505 SUPERFAMILY SSF52540 13 221 1.55E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_15595 dac910298eac6071c0d60d4aa4c1e878 505 Pfam PF13401 AAA domain 27 128 9.5E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_15595 dac910298eac6071c0d60d4aa4c1e878 505 Gene3D G3DSA:3.40.50.300 10 162 5.0E-7 T 14-10-2018 DA442_22670 6bd70e5a0e9844de587c1feb9f0b3e55 915 Pfam PF00675 Insulinase (Peptidase family M16) 47 176 6.4E-25 T 14-10-2018 IPR011765 Peptidase M16, N-terminal DA442_22670 6bd70e5a0e9844de587c1feb9f0b3e55 915 SUPERFAMILY SSF63411 319 455 5.94E-6 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DA442_22670 6bd70e5a0e9844de587c1feb9f0b3e55 915 SUPERFAMILY SSF63411 742 906 9.6E-15 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DA442_22670 6bd70e5a0e9844de587c1feb9f0b3e55 915 SUPERFAMILY SSF63411 25 239 2.27E-43 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DA442_22670 6bd70e5a0e9844de587c1feb9f0b3e55 915 Pfam PF05193 Peptidase M16 inactive domain 669 847 1.5E-7 T 14-10-2018 IPR007863 Peptidase M16, C-terminal DA442_22670 6bd70e5a0e9844de587c1feb9f0b3e55 915 Pfam PF05193 Peptidase M16 inactive domain 199 372 9.9E-13 T 14-10-2018 IPR007863 Peptidase M16, C-terminal DA442_22670 6bd70e5a0e9844de587c1feb9f0b3e55 915 Gene3D G3DSA:3.30.830.10 735 914 3.6E-11 T 14-10-2018 DA442_22670 6bd70e5a0e9844de587c1feb9f0b3e55 915 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 60 83 - T 14-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 DA442_22670 6bd70e5a0e9844de587c1feb9f0b3e55 915 SUPERFAMILY SSF63411 494 713 4.54E-25 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DA442_22670 6bd70e5a0e9844de587c1feb9f0b3e55 915 Gene3D G3DSA:3.30.830.10 265 468 6.0E-12 T 14-10-2018 DA442_22670 6bd70e5a0e9844de587c1feb9f0b3e55 915 Gene3D G3DSA:3.30.830.10 506 715 3.5E-13 T 14-10-2018 DA442_22670 6bd70e5a0e9844de587c1feb9f0b3e55 915 Gene3D G3DSA:3.30.830.10 6 247 3.5E-59 T 14-10-2018 DA442_00750 177fe3c7827b4c21ac984380d6fe299f 275 Gene3D G3DSA:3.40.190.80 162 264 2.7E-26 T 14-10-2018 DA442_00750 177fe3c7827b4c21ac984380d6fe299f 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 65 81 9.0E-6 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DA442_00750 177fe3c7827b4c21ac984380d6fe299f 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 89 105 9.0E-6 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DA442_00750 177fe3c7827b4c21ac984380d6fe299f 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 43 63 9.0E-6 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DA442_00750 177fe3c7827b4c21ac984380d6fe299f 275 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 10 260 5.2E-105 T 14-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 DA442_00750 177fe3c7827b4c21ac984380d6fe299f 275 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 10 262 39.024 T 14-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 DA442_00750 177fe3c7827b4c21ac984380d6fe299f 275 SUPERFAMILY SSF56655 6 272 9.95E-77 T 14-10-2018 DA442_00750 177fe3c7827b4c21ac984380d6fe299f 275 Pfam PF00459 Inositol monophosphatase family 7 253 1.7E-50 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DA442_00750 177fe3c7827b4c21ac984380d6fe299f 275 Gene3D G3DSA:3.30.540.10 6 161 6.6E-45 T 14-10-2018 DA442_10995 d30957264dd69146e18add5f8bc6213b 236 SUPERFAMILY SSF51120 9 203 1.22E-27 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DA442_10995 d30957264dd69146e18add5f8bc6213b 236 PRINTS PR00313 NodO calcium binding signature 88 96 1.3E-11 T 14-10-2018 DA442_10995 d30957264dd69146e18add5f8bc6213b 236 PRINTS PR00313 NodO calcium binding signature 76 87 1.3E-11 T 14-10-2018 DA442_10995 d30957264dd69146e18add5f8bc6213b 236 PRINTS PR00313 NodO calcium binding signature 124 133 1.3E-11 T 14-10-2018 DA442_10995 d30957264dd69146e18add5f8bc6213b 236 PRINTS PR00313 NodO calcium binding signature 106 114 1.3E-11 T 14-10-2018 DA442_10995 d30957264dd69146e18add5f8bc6213b 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 66 84 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site DA442_10995 d30957264dd69146e18add5f8bc6213b 236 Gene3D G3DSA:2.150.10.10 2 58 1.8E-6 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DA442_10995 d30957264dd69146e18add5f8bc6213b 236 Gene3D G3DSA:2.150.10.10 95 229 4.9E-11 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DA442_10995 d30957264dd69146e18add5f8bc6213b 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 48 66 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site DA442_10995 d30957264dd69146e18add5f8bc6213b 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 57 75 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site DA442_10995 d30957264dd69146e18add5f8bc6213b 236 Gene3D G3DSA:2.150.10.10 59 94 1.0E-9 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DA442_10995 d30957264dd69146e18add5f8bc6213b 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 61 77 0.0036 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DA442_10995 d30957264dd69146e18add5f8bc6213b 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 43 59 0.0026 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DA442_10995 d30957264dd69146e18add5f8bc6213b 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 99 113 0.029 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DA442_10995 d30957264dd69146e18add5f8bc6213b 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 79 95 0.42 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DA442_10995 d30957264dd69146e18add5f8bc6213b 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 29 40 27.0 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DA442_10995 d30957264dd69146e18add5f8bc6213b 236 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 12 26 1.7 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DA442_10995 d30957264dd69146e18add5f8bc6213b 236 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 75 93 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site DA442_25510 5d08c0e162b6736b5ab138b6a5af9d87 141 PIRSF PIRSF006276 1 141 4.2E-44 T 14-10-2018 IPR006015 Universal stress protein A DA442_25510 5d08c0e162b6736b5ab138b6a5af9d87 141 Pfam PF00582 Universal stress protein family 3 138 5.1E-13 T 14-10-2018 IPR006016 UspA DA442_25510 5d08c0e162b6736b5ab138b6a5af9d87 141 Gene3D G3DSA:3.40.50.620 2 141 2.2E-35 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DA442_25510 5d08c0e162b6736b5ab138b6a5af9d87 141 SUPERFAMILY SSF52402 3 139 4.52E-25 T 14-10-2018 DA442_13840 443180c794f99eef1f92443b05a016a5 177 SUPERFAMILY SSF55718 46 141 1.37E-20 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily DA442_13840 443180c794f99eef1f92443b05a016a5 177 Gene3D G3DSA:3.30.1050.10 14 141 2.5E-7 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily DA442_13840 443180c794f99eef1f92443b05a016a5 177 PIRSF PIRSF025550 3 176 1.5E-87 T 14-10-2018 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT DA442_13840 443180c794f99eef1f92443b05a016a5 177 Pfam PF02036 SCP-2 sterol transfer family 44 136 5.0E-19 T 14-10-2018 IPR003033 SCP2 sterol-binding domain DA442_08195 4cc30ebc8d52d8531b656c84478db7b2 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 251 1.5E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DA442_08195 4cc30ebc8d52d8531b656c84478db7b2 256 Gene3D G3DSA:1.10.3720.10 4 256 2.1E-47 T 14-10-2018 IPR035906 MetI-like superfamily DA442_08195 4cc30ebc8d52d8531b656c84478db7b2 256 SUPERFAMILY SSF161098 4 254 4.67E-55 T 14-10-2018 IPR035906 MetI-like superfamily DA442_20065 26e4d168c8c8a83dcbe98d1985f49e4b 714 SMART SM00220 91 374 9.1E-37 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 DA442_20065 26e4d168c8c8a83dcbe98d1985f49e4b 714 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 218 230 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 DA442_20065 26e4d168c8c8a83dcbe98d1985f49e4b 714 SUPERFAMILY SSF56112 85 323 4.99E-57 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily DA442_20065 26e4d168c8c8a83dcbe98d1985f49e4b 714 Gene3D G3DSA:1.10.510.10 172 404 6.3E-34 T 14-10-2018 DA442_20065 26e4d168c8c8a83dcbe98d1985f49e4b 714 Gene3D G3DSA:3.30.200.20 79 171 7.1E-26 T 14-10-2018 DA442_20065 26e4d168c8c8a83dcbe98d1985f49e4b 714 Pfam PF00069 Protein kinase domain 91 323 1.8E-40 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 DA442_14205 f57769e97919f1ac713def7bb3d4134d 222 SMART SM00947 30 192 1.3E-66 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 DA442_14205 f57769e97919f1ac713def7bb3d4134d 222 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 14-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 DA442_14205 f57769e97919f1ac713def7bb3d4134d 222 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 14-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 DA442_14205 f57769e97919f1ac713def7bb3d4134d 222 SUPERFAMILY SSF53056 2 212 1.83E-74 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 DA442_14205 f57769e97919f1ac713def7bb3d4134d 222 Pfam PF00484 Carbonic anhydrase 38 188 7.3E-50 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 DA442_14205 f57769e97919f1ac713def7bb3d4134d 222 Gene3D G3DSA:3.40.1050.10 1 222 1.8E-90 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 DA442_25020 8193cd321d36e09e257a3ec431f583dd 271 SMART SM00530 10 73 2.1E-4 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DA442_25020 8193cd321d36e09e257a3ec431f583dd 271 Pfam PF01381 Helix-turn-helix 12 67 2.6E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DA442_25020 8193cd321d36e09e257a3ec431f583dd 271 SUPERFAMILY SSF47413 5 72 8.16E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DA442_25020 8193cd321d36e09e257a3ec431f583dd 271 Gene3D G3DSA:1.10.260.40 2 87 1.4E-10 T 14-10-2018 DA442_19795 4e722ea3f7c44cef2afdf48e3bc0fb84 896 SUPERFAMILY SSF55486 254 418 1.82E-12 T 14-10-2018 DA442_19795 4e722ea3f7c44cef2afdf48e3bc0fb84 896 Pfam PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase 694 767 7.6E-8 T 14-10-2018 IPR018905 Alpha-galactosidase, NEW3 domain DA442_19795 4e722ea3f7c44cef2afdf48e3bc0fb84 896 Pfam PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase 579 652 1.7E-5 T 14-10-2018 IPR018905 Alpha-galactosidase, NEW3 domain DA442_19795 4e722ea3f7c44cef2afdf48e3bc0fb84 896 Gene3D G3DSA:2.60.40.10 685 779 8.6E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold DA442_19795 4e722ea3f7c44cef2afdf48e3bc0fb84 896 Gene3D G3DSA:2.60.40.10 559 665 8.9E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold DA442_19795 4e722ea3f7c44cef2afdf48e3bc0fb84 896 Pfam PF05548 Gametolysin peptidase M11 316 486 1.3E-8 T 14-10-2018 IPR008752 Peptidase M11, gametolysin DA442_19795 4e722ea3f7c44cef2afdf48e3bc0fb84 896 Gene3D G3DSA:3.40.390.10 299 393 5.5E-5 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 DA442_21525 2e27477490e045736b651c8c7220cce7 205 Pfam PF00043 Glutathione S-transferase, C-terminal domain 121 192 9.0E-10 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal DA442_21525 2e27477490e045736b651c8c7220cce7 205 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 73 2.9E-15 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DA442_21525 2e27477490e045736b651c8c7220cce7 205 SUPERFAMILY SSF52833 1 77 8.98E-19 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_21525 2e27477490e045736b651c8c7220cce7 205 Gene3D G3DSA:1.20.1050.10 84 198 1.2E-30 T 14-10-2018 DA442_21525 2e27477490e045736b651c8c7220cce7 205 SUPERFAMILY SSF47616 72 197 1.81E-20 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DA442_21525 2e27477490e045736b651c8c7220cce7 205 Gene3D G3DSA:3.40.30.10 1 82 7.2E-31 T 14-10-2018 DA442_02180 993c68d531b9d9d969e72b009b24937f 947 Pfam PF08335 GlnD PII-uridylyltransferase 300 439 3.4E-44 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 DA442_02180 993c68d531b9d9d969e72b009b24937f 947 Pfam PF08335 GlnD PII-uridylyltransferase 830 912 2.5E-7 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 DA442_02180 993c68d531b9d9d969e72b009b24937f 947 SUPERFAMILY SSF81301 23 289 1.06E-87 T 14-10-2018 DA442_02180 993c68d531b9d9d969e72b009b24937f 947 Gene3D G3DSA:3.30.460.10 114 287 4.5E-65 T 14-10-2018 DA442_02180 993c68d531b9d9d969e72b009b24937f 947 Gene3D G3DSA:3.30.460.100 565 814 7.4E-92 T 14-10-2018 DA442_02180 993c68d531b9d9d969e72b009b24937f 947 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 30 944 19.171 T 14-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 DA442_02180 993c68d531b9d9d969e72b009b24937f 947 SUPERFAMILY SSF81593 290 439 4.79E-42 T 14-10-2018 DA442_02180 993c68d531b9d9d969e72b009b24937f 947 Gene3D G3DSA:1.20.120.330 288 443 2.3E-53 T 14-10-2018 DA442_02180 993c68d531b9d9d969e72b009b24937f 947 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 33 279 2.5E-94 T 14-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 DA442_02180 993c68d531b9d9d969e72b009b24937f 947 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 556 807 7.4E-98 T 14-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 DA442_02180 993c68d531b9d9d969e72b009b24937f 947 SUPERFAMILY SSF81593 818 946 2.28E-32 T 14-10-2018 DA442_02180 993c68d531b9d9d969e72b009b24937f 947 Gene3D G3DSA:1.20.120.330 815 947 3.2E-43 T 14-10-2018 DA442_02180 993c68d531b9d9d969e72b009b24937f 947 Gene3D G3DSA:1.10.4050.10 2 112 8.0E-12 T 14-10-2018 DA442_02180 993c68d531b9d9d969e72b009b24937f 947 Gene3D G3DSA:1.20.120.1510 451 564 8.7E-32 T 14-10-2018 DA442_02180 993c68d531b9d9d969e72b009b24937f 947 SUPERFAMILY SSF81301 528 818 3.27E-88 T 14-10-2018 DA442_08590 74f09d98716ed2053911d1badf3f8f5e 474 SUPERFAMILY SSF55811 23 161 1.49E-18 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DA442_08590 74f09d98716ed2053911d1badf3f8f5e 474 Pfam PF00293 NUDIX domain 24 94 3.4E-10 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DA442_08590 74f09d98716ed2053911d1badf3f8f5e 474 ProSitePatterns PS00893 Nudix box signature. 50 71 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DA442_08590 74f09d98716ed2053911d1badf3f8f5e 474 SUPERFAMILY SSF48317 199 346 5.07E-9 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily DA442_08590 74f09d98716ed2053911d1badf3f8f5e 474 Gene3D G3DSA:3.90.79.10 16 108 3.0E-14 T 14-10-2018 DA442_08590 74f09d98716ed2053911d1badf3f8f5e 474 Pfam PF01569 PAP2 superfamily 233 345 2.7E-7 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DA442_08500 66362b991488fac257a7cc095e1fa296 109 PIRSF PIRSF006223 2 109 6.5E-41 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE DA442_08500 66362b991488fac257a7cc095e1fa296 109 Pfam PF04358 DsrC like protein 4 109 1.3E-43 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE DA442_08500 66362b991488fac257a7cc095e1fa296 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 4 109 3.6E-49 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE DA442_08500 66362b991488fac257a7cc095e1fa296 109 Gene3D G3DSA:1.10.10.370 39 109 9.9E-31 T 14-10-2018 DA442_08500 66362b991488fac257a7cc095e1fa296 109 SUPERFAMILY SSF69721 2 109 6.67E-41 T 14-10-2018 IPR025526 DsrC-like domain superfamily DA442_08500 66362b991488fac257a7cc095e1fa296 109 Gene3D G3DSA:3.30.1420.10 2 38 6.8E-12 T 14-10-2018 DA442_00600 6a72ee9affe5f20fa89e8babf5c81a79 463 Pfam PF06969 HemN C-terminal domain 369 437 1.4E-11 T 14-10-2018 IPR010723 HemN, C-terminal DA442_00600 6a72ee9affe5f20fa89e8babf5c81a79 463 SUPERFAMILY SSF102114 12 450 5.36E-145 T 14-10-2018 DA442_00600 6a72ee9affe5f20fa89e8babf5c81a79 463 PIRSF PIRSF000167 9 460 2.1E-173 T 14-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 DA442_00600 6a72ee9affe5f20fa89e8babf5c81a79 463 Gene3D G3DSA:3.80.30.20 7 369 2.7E-137 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe DA442_00600 6a72ee9affe5f20fa89e8babf5c81a79 463 Pfam PF04055 Radical SAM superfamily 63 234 3.4E-18 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DA442_00600 6a72ee9affe5f20fa89e8babf5c81a79 463 SMART SM00729 58 278 4.6E-55 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DA442_00600 6a72ee9affe5f20fa89e8babf5c81a79 463 Gene3D G3DSA:1.10.10.920 370 463 1.7E-34 T 14-10-2018 DA442_00600 6a72ee9affe5f20fa89e8babf5c81a79 463 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 14 463 3.6E-207 T 14-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 DA442_25550 785c4fdc7584e26eda807b337e646f19 176 Pfam PF13302 Acetyltransferase (GNAT) domain 6 139 6.8E-20 T 14-10-2018 IPR000182 GNAT domain DA442_25550 785c4fdc7584e26eda807b337e646f19 176 Gene3D G3DSA:3.40.630.30 5 173 7.1E-50 T 14-10-2018 DA442_25550 785c4fdc7584e26eda807b337e646f19 176 SUPERFAMILY SSF55729 4 164 3.72E-41 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_15685 fc247a0be3fc2c3852d3723cb9858014 877 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 877 18.026 T 14-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DA442_15685 fc247a0be3fc2c3852d3723cb9858014 877 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 535 547 - T 14-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DA442_15685 fc247a0be3fc2c3852d3723cb9858014 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 384 404 2.7E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DA442_15685 fc247a0be3fc2c3852d3723cb9858014 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 245 260 2.7E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DA442_15685 fc247a0be3fc2c3852d3723cb9858014 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 2.7E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DA442_15685 fc247a0be3fc2c3852d3723cb9858014 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 575 604 2.7E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DA442_15685 fc247a0be3fc2c3852d3723cb9858014 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 707 733 2.7E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DA442_15685 fc247a0be3fc2c3852d3723cb9858014 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 533 553 2.7E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DA442_15685 fc247a0be3fc2c3852d3723cb9858014 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 2.7E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DA442_15685 fc247a0be3fc2c3852d3723cb9858014 877 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 14-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DA442_15685 fc247a0be3fc2c3852d3723cb9858014 877 SUPERFAMILY SSF51621 6 877 0.0 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DA442_15685 fc247a0be3fc2c3852d3723cb9858014 877 Gene3D G3DSA:1.20.1440.90 273 387 7.4E-27 T 14-10-2018 DA442_15685 fc247a0be3fc2c3852d3723cb9858014 877 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 877 7.1E-291 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 DA442_11690 e4ae44582212fbd4eb069bd7e393747a 324 Pfam PF00005 ABC transporter 25 181 1.6E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_11690 e4ae44582212fbd4eb069bd7e393747a 324 Gene3D G3DSA:3.40.50.300 1 323 4.0E-97 T 14-10-2018 DA442_11690 e4ae44582212fbd4eb069bd7e393747a 324 SMART SM00382 33 239 1.0E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_11690 e4ae44582212fbd4eb069bd7e393747a 324 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 316 9.7E-24 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DA442_11690 e4ae44582212fbd4eb069bd7e393747a 324 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_11690 e4ae44582212fbd4eb069bd7e393747a 324 SUPERFAMILY SSF52540 32 302 1.78E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_11690 e4ae44582212fbd4eb069bd7e393747a 324 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 5.6E-18 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DA442_15505 3faf671063ed37328ab3277abda8ec75 71 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 63 9.8E-24 T 14-10-2018 IPR014318 Phage shock protein, PspG DA442_15505 3faf671063ed37328ab3277abda8ec75 71 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 2 64 9.3E-23 T 14-10-2018 IPR014318 Phage shock protein, PspG DA442_03200 851240ac9047ed97ea04266804cf1d95 517 Gene3D G3DSA:3.40.50.880 6 201 1.2E-54 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DA442_03200 851240ac9047ed97ea04266804cf1d95 517 PRINTS PR00097 Anthranilate synthase component II signature 54 63 3.5E-6 T 14-10-2018 DA442_03200 851240ac9047ed97ea04266804cf1d95 517 PRINTS PR00097 Anthranilate synthase component II signature 81 92 3.5E-6 T 14-10-2018 DA442_03200 851240ac9047ed97ea04266804cf1d95 517 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.5E-6 T 14-10-2018 DA442_03200 851240ac9047ed97ea04266804cf1d95 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 2.8E-7 T 14-10-2018 DA442_03200 851240ac9047ed97ea04266804cf1d95 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 2.8E-7 T 14-10-2018 DA442_03200 851240ac9047ed97ea04266804cf1d95 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 2.8E-7 T 14-10-2018 DA442_03200 851240ac9047ed97ea04266804cf1d95 517 Gene3D G3DSA:3.30.300.10 398 517 8.5E-51 T 14-10-2018 DA442_03200 851240ac9047ed97ea04266804cf1d95 517 Pfam PF02540 NAD synthase 212 285 1.2E-7 T 14-10-2018 IPR022310 NAD/GMP synthase DA442_03200 851240ac9047ed97ea04266804cf1d95 517 Gene3D G3DSA:3.40.50.620 202 397 5.5E-75 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DA442_03200 851240ac9047ed97ea04266804cf1d95 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 4.0E-6 T 14-10-2018 DA442_03200 851240ac9047ed97ea04266804cf1d95 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 4.0E-6 T 14-10-2018 DA442_03200 851240ac9047ed97ea04266804cf1d95 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 4.0E-6 T 14-10-2018 DA442_03200 851240ac9047ed97ea04266804cf1d95 517 SUPERFAMILY SSF52317 5 196 1.19E-57 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DA442_03200 851240ac9047ed97ea04266804cf1d95 517 SUPERFAMILY SSF54810 397 517 6.93E-51 T 14-10-2018 DA442_03200 851240ac9047ed97ea04266804cf1d95 517 SUPERFAMILY SSF52402 189 412 4.85E-58 T 14-10-2018 DA442_03200 851240ac9047ed97ea04266804cf1d95 517 Pfam PF00117 Glutamine amidotransferase class-I 12 191 1.0E-42 T 14-10-2018 IPR017926 Glutamine amidotransferase DA442_03200 851240ac9047ed97ea04266804cf1d95 517 Pfam PF00958 GMP synthase C terminal domain 425 516 1.2E-43 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 DA442_03200 851240ac9047ed97ea04266804cf1d95 517 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 205 517 5.5E-156 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 DA442_03200 851240ac9047ed97ea04266804cf1d95 517 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 517 56.511 T 14-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 DA442_03200 851240ac9047ed97ea04266804cf1d95 517 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 197 1.8E-84 T 14-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 DA442_11280 57c869606da10b3a1cf3f2c18986220c 203 Gene3D G3DSA:1.10.10.10 134 196 2.0E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_11280 57c869606da10b3a1cf3f2c18986220c 203 Gene3D G3DSA:3.40.50.2300 3 129 4.5E-36 T 14-10-2018 DA442_11280 57c869606da10b3a1cf3f2c18986220c 203 SMART SM00448 8 119 3.4E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_11280 57c869606da10b3a1cf3f2c18986220c 203 SUPERFAMILY SSF46894 129 197 6.46E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DA442_11280 57c869606da10b3a1cf3f2c18986220c 203 Pfam PF00072 Response regulator receiver domain 10 119 9.8E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_11280 57c869606da10b3a1cf3f2c18986220c 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 2.1E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_11280 57c869606da10b3a1cf3f2c18986220c 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 2.1E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_11280 57c869606da10b3a1cf3f2c18986220c 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 2.1E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_11280 57c869606da10b3a1cf3f2c18986220c 203 SUPERFAMILY SSF52172 8 122 1.02E-29 T 14-10-2018 IPR011006 CheY-like superfamily DA442_11280 57c869606da10b3a1cf3f2c18986220c 203 Pfam PF00196 Bacterial regulatory proteins, luxR family 141 193 8.2E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_11280 57c869606da10b3a1cf3f2c18986220c 203 SMART SM00421 139 196 1.0E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_11280 57c869606da10b3a1cf3f2c18986220c 203 ProSitePatterns PS00622 LuxR-type HTH domain signature. 156 183 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_23590 618d3528e2651e58905e3db5695eb32b 303 Pfam PF07859 alpha/beta hydrolase fold 74 273 1.9E-8 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 DA442_23590 618d3528e2651e58905e3db5695eb32b 303 Gene3D G3DSA:3.40.50.1820 54 299 6.8E-50 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_23590 618d3528e2651e58905e3db5695eb32b 303 SUPERFAMILY SSF53474 56 293 2.32E-28 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_12935 48b457f5af289a6d8b84c1d5113032b8 334 Gene3D G3DSA:3.10.520.20 15 334 5.1E-113 T 14-10-2018 DA442_12935 48b457f5af289a6d8b84c1d5113032b8 334 PIRSF PIRSF006268 1 334 5.4E-94 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 DA442_12935 48b457f5af289a6d8b84c1d5113032b8 334 Pfam PF02424 ApbE family 31 310 2.4E-86 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 DA442_12935 48b457f5af289a6d8b84c1d5113032b8 334 SUPERFAMILY SSF143631 24 332 4.71E-101 T 14-10-2018 IPR003374 ApbE-like superfamily DA442_18130 132dfd1388cbb95b1d69af1e9df539c2 450 Pfam PF00012 Hsp70 protein 129 259 1.6E-10 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DA442_18130 132dfd1388cbb95b1d69af1e9df539c2 450 SUPERFAMILY SSF53067 208 447 2.16E-32 T 14-10-2018 DA442_18130 132dfd1388cbb95b1d69af1e9df539c2 450 Gene3D G3DSA:3.30.420.40 379 433 4.2E-11 T 14-10-2018 DA442_18130 132dfd1388cbb95b1d69af1e9df539c2 450 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 213 226 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DA442_18130 132dfd1388cbb95b1d69af1e9df539c2 450 SUPERFAMILY SSF53067 1 205 3.89E-26 T 14-10-2018 DA442_18130 132dfd1388cbb95b1d69af1e9df539c2 450 Gene3D G3DSA:3.90.640.10 336 378 4.2E-11 T 14-10-2018 DA442_13250 c910eb7fa1a786e630be6a0af4edfd6e 328 SUPERFAMILY SSF47413 1 51 1.22E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DA442_13250 c910eb7fa1a786e630be6a0af4edfd6e 328 Gene3D G3DSA:1.10.260.40 1 60 3.2E-18 T 14-10-2018 DA442_13250 c910eb7fa1a786e630be6a0af4edfd6e 328 Pfam PF13377 Periplasmic binding protein-like domain 167 327 9.1E-31 T 14-10-2018 DA442_13250 c910eb7fa1a786e630be6a0af4edfd6e 328 Gene3D G3DSA:3.40.50.2300 79 319 3.7E-45 T 14-10-2018 DA442_13250 c910eb7fa1a786e630be6a0af4edfd6e 328 SUPERFAMILY SSF53822 77 324 2.75E-43 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DA442_13250 c910eb7fa1a786e630be6a0af4edfd6e 328 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 49 2.1E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DA442_13250 c910eb7fa1a786e630be6a0af4edfd6e 328 Gene3D G3DSA:3.40.50.2300 159 321 3.7E-45 T 14-10-2018 DA442_13250 c910eb7fa1a786e630be6a0af4edfd6e 328 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 DA442_13250 c910eb7fa1a786e630be6a0af4edfd6e 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.7E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DA442_13250 c910eb7fa1a786e630be6a0af4edfd6e 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.7E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DA442_13250 c910eb7fa1a786e630be6a0af4edfd6e 328 SMART SM00354 1 74 1.8E-14 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DA442_07900 c68a0ac3ca0cfde3ce1371115c9b7a5b 394 Gene3D G3DSA:3.40.50.2000 19 363 2.8E-61 T 14-10-2018 DA442_07900 c68a0ac3ca0cfde3ce1371115c9b7a5b 394 SUPERFAMILY SSF53756 7 369 9.87E-68 T 14-10-2018 DA442_07900 c68a0ac3ca0cfde3ce1371115c9b7a5b 394 Pfam PF00534 Glycosyl transferases group 1 184 347 4.1E-31 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 DA442_07900 c68a0ac3ca0cfde3ce1371115c9b7a5b 394 Gene3D G3DSA:3.40.50.2000 172 353 2.8E-61 T 14-10-2018 DA442_07900 c68a0ac3ca0cfde3ce1371115c9b7a5b 394 Pfam PF13439 Glycosyltransferase Family 4 18 175 1.2E-15 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DA442_24860 4998fc58b8a06d637523ea5622c7cadf 674 Pfam PF00679 Elongation factor G C-terminus 579 665 1.0E-24 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like DA442_24860 4998fc58b8a06d637523ea5622c7cadf 674 SUPERFAMILY SSF52540 2 259 8.4E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_24860 4998fc58b8a06d637523ea5622c7cadf 674 Gene3D G3DSA:2.40.30.10 268 389 5.2E-26 T 14-10-2018 DA442_24860 4998fc58b8a06d637523ea5622c7cadf 674 Pfam PF14492 Elongation Factor G, domain II 382 454 1.3E-21 T 14-10-2018 DA442_24860 4998fc58b8a06d637523ea5622c7cadf 674 Gene3D G3DSA:3.30.70.240 582 653 4.9E-76 T 14-10-2018 DA442_24860 4998fc58b8a06d637523ea5622c7cadf 674 SUPERFAMILY SSF50447 243 370 1.34E-21 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DA442_24860 4998fc58b8a06d637523ea5622c7cadf 674 SMART SM00838 578 666 3.1E-21 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like DA442_24860 4998fc58b8a06d637523ea5622c7cadf 674 SMART SM00889 458 576 2.0E-53 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 DA442_24860 4998fc58b8a06d637523ea5622c7cadf 674 Pfam PF00009 Elongation factor Tu GTP binding domain 5 259 1.0E-28 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_24860 4998fc58b8a06d637523ea5622c7cadf 674 SUPERFAMILY SSF54211 457 577 1.26E-37 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DA442_24860 4998fc58b8a06d637523ea5622c7cadf 674 SUPERFAMILY SSF54980 381 457 3.27E-16 T 14-10-2018 IPR035647 EF-G domain III/V-like DA442_24860 4998fc58b8a06d637523ea5622c7cadf 674 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 142 1.3E-12 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DA442_24860 4998fc58b8a06d637523ea5622c7cadf 674 Pfam PF03764 Elongation factor G, domain IV 457 575 1.6E-36 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 DA442_24860 4998fc58b8a06d637523ea5622c7cadf 674 Gene3D G3DSA:3.40.50.300 1 264 5.9E-52 T 14-10-2018 DA442_24860 4998fc58b8a06d637523ea5622c7cadf 674 Gene3D G3DSA:3.30.230.10 463 666 4.9E-76 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DA442_24860 4998fc58b8a06d637523ea5622c7cadf 674 Gene3D G3DSA:3.30.70.870 390 459 9.8E-17 T 14-10-2018 DA442_24860 4998fc58b8a06d637523ea5622c7cadf 674 SUPERFAMILY SSF54980 579 669 1.29E-20 T 14-10-2018 IPR035647 EF-G domain III/V-like DA442_07940 b867bb863be71332b793d6659f213083 106 Gene3D G3DSA:3.30.750.24 2 105 1.3E-17 T 14-10-2018 IPR036513 STAS domain superfamily DA442_07940 b867bb863be71332b793d6659f213083 106 SUPERFAMILY SSF52091 6 101 7.46E-20 T 14-10-2018 IPR036513 STAS domain superfamily DA442_07940 b867bb863be71332b793d6659f213083 106 Pfam PF13466 STAS domain 17 95 1.4E-9 T 14-10-2018 IPR002645 STAS domain DA442_02205 507b0e8ade09110825060cb7f8c7a1e0 268 SUPERFAMILY SSF56300 8 265 7.9E-58 T 14-10-2018 DA442_02205 507b0e8ade09110825060cb7f8c7a1e0 268 Pfam PF00149 Calcineurin-like phosphoesterase 9 200 4.3E-16 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DA442_02205 507b0e8ade09110825060cb7f8c7a1e0 268 Gene3D G3DSA:3.60.21.10 1 265 1.6E-69 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like DA442_02205 507b0e8ade09110825060cb7f8c7a1e0 268 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 199 254 4.0E-27 T 14-10-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 DA442_02205 507b0e8ade09110825060cb7f8c7a1e0 268 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 8 254 41.518 T 14-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 DA442_17500 9bdc5b1c370c96c2b7181daf008e9df4 293 SUPERFAMILY SSF110849 40 132 6.54E-27 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily DA442_17500 9bdc5b1c370c96c2b7181daf008e9df4 293 Pfam PF02195 ParB-like nuclease domain 40 130 1.4E-28 T 14-10-2018 IPR003115 ParB/Sulfiredoxin DA442_17500 9bdc5b1c370c96c2b7181daf008e9df4 293 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 37 213 2.8E-57 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 DA442_17500 9bdc5b1c370c96c2b7181daf008e9df4 293 Gene3D G3DSA:1.10.10.2830 117 230 1.3E-34 T 14-10-2018 DA442_17500 9bdc5b1c370c96c2b7181daf008e9df4 293 SMART SM00470 40 130 2.3E-35 T 14-10-2018 IPR003115 ParB/Sulfiredoxin DA442_17500 9bdc5b1c370c96c2b7181daf008e9df4 293 SUPERFAMILY SSF109709 122 229 4.71E-33 T 14-10-2018 DA442_17500 9bdc5b1c370c96c2b7181daf008e9df4 293 Gene3D G3DSA:3.90.1530.30 53 116 2.5E-26 T 14-10-2018 DA442_16370 c7d8601c7d8af53c065068e3d1fec45b 331 Gene3D G3DSA:1.10.1200.80 260 331 1.1E-7 T 14-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 DA442_16370 c7d8601c7d8af53c065068e3d1fec45b 331 Pfam PF01207 Dihydrouridine synthase (Dus) 22 315 6.7E-108 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 DA442_16370 c7d8601c7d8af53c065068e3d1fec45b 331 PIRSF PIRSF006621 9 330 6.6E-101 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 DA442_16370 c7d8601c7d8af53c065068e3d1fec45b 331 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 10 330 49.747 T 14-10-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 DA442_16370 c7d8601c7d8af53c065068e3d1fec45b 331 Gene3D G3DSA:3.20.20.70 15 258 1.0E-77 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_16370 c7d8601c7d8af53c065068e3d1fec45b 331 SUPERFAMILY SSF51395 19 328 1.12E-89 T 14-10-2018 DA442_16370 c7d8601c7d8af53c065068e3d1fec45b 331 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 12 329 7.2E-132 T 14-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 DA442_16370 c7d8601c7d8af53c065068e3d1fec45b 331 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 103 121 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 DA442_24570 b44c736cfb9d37cc984d14706bb15516 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 148 243 3.6E-33 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G DA442_24570 b44c736cfb9d37cc984d14706bb15516 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 3.7E-46 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G DA442_24570 b44c736cfb9d37cc984d14706bb15516 261 SUPERFAMILY SSF117143 92 222 5.36E-37 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like DA442_24570 b44c736cfb9d37cc984d14706bb15516 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 258 2.2E-27 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DA442_24570 b44c736cfb9d37cc984d14706bb15516 261 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site DA442_24570 b44c736cfb9d37cc984d14706bb15516 261 Pfam PF00460 Flagella basal body rod protein 5 35 4.6E-11 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 DA442_24570 b44c736cfb9d37cc984d14706bb15516 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 6.3E-119 T 14-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 DA442_20105 9cbf29772bd3cdb4d95ab45808464996 191 SUPERFAMILY SSF48498 83 174 1.56E-13 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DA442_20105 9cbf29772bd3cdb4d95ab45808464996 191 SUPERFAMILY SSF46689 2 65 2.31E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_20105 9cbf29772bd3cdb4d95ab45808464996 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 56 9.5E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DA442_20105 9cbf29772bd3cdb4d95ab45808464996 191 Gene3D G3DSA:1.10.10.60 1 66 4.5E-21 T 14-10-2018 DA442_20105 9cbf29772bd3cdb4d95ab45808464996 191 Gene3D G3DSA:1.10.357.10 73 189 4.5E-14 T 14-10-2018 DA442_24800 b8c3d45c296a6e7448970d9701bcbb67 302 SUPERFAMILY SSF103481 181 281 3.27E-11 T 14-10-2018 DA442_24800 b8c3d45c296a6e7448970d9701bcbb67 302 SUPERFAMILY SSF103481 42 142 7.45E-15 T 14-10-2018 DA442_24800 b8c3d45c296a6e7448970d9701bcbb67 302 Pfam PF00892 EamA-like transporter family 9 138 1.5E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DA442_18880 27c83d11c6957b7a82f6f9b54ab88340 954 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 952 25.912 T 14-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 DA442_18880 27c83d11c6957b7a82f6f9b54ab88340 954 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 946 0.0 T 14-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 DA442_18880 27c83d11c6957b7a82f6f9b54ab88340 954 Pfam PF02347 Glycine cleavage system P-protein 458 734 6.7E-9 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 DA442_18880 27c83d11c6957b7a82f6f9b54ab88340 954 Pfam PF02347 Glycine cleavage system P-protein 17 438 4.7E-179 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 DA442_18880 27c83d11c6957b7a82f6f9b54ab88340 954 SUPERFAMILY SSF53383 17 437 2.12E-99 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_18880 27c83d11c6957b7a82f6f9b54ab88340 954 Gene3D G3DSA:3.90.1150.10 760 896 3.4E-41 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DA442_18880 27c83d11c6957b7a82f6f9b54ab88340 954 Gene3D G3DSA:3.40.640.10 95 353 1.6E-104 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_18880 27c83d11c6957b7a82f6f9b54ab88340 954 Gene3D G3DSA:3.40.640.10 522 746 6.3E-59 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_18880 27c83d11c6957b7a82f6f9b54ab88340 954 SUPERFAMILY SSF53383 454 947 1.15E-97 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_14250 ed80b7d4623768bfd7865153e4ccbec1 145 Gene3D G3DSA:3.30.700.10 12 145 2.1E-31 T 14-10-2018 DA442_14250 ed80b7d4623768bfd7865153e4ccbec1 145 Pfam PF00114 Pilin (bacterial filament) 40 144 2.1E-14 T 14-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 DA442_14250 ed80b7d4623768bfd7865153e4ccbec1 145 PRINTS PR00813 Bacterial general secretion pathway protein G signature 47 65 2.3E-10 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 DA442_14250 ed80b7d4623768bfd7865153e4ccbec1 145 PRINTS PR00813 Bacterial general secretion pathway protein G signature 11 36 2.3E-10 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 DA442_14250 ed80b7d4623768bfd7865153e4ccbec1 145 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DA442_14250 ed80b7d4623768bfd7865153e4ccbec1 145 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 32 4.6E-10 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DA442_14250 ed80b7d4623768bfd7865153e4ccbec1 145 SUPERFAMILY SSF54523 12 136 5.89E-24 T 14-10-2018 DA442_14250 ed80b7d4623768bfd7865153e4ccbec1 145 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 31 9.5E-11 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DA442_25590 04745e1ceca81fcb00dfe54f91a83f52 459 SUPERFAMILY SSF56954 38 443 7.46E-47 T 14-10-2018 DA442_25590 04745e1ceca81fcb00dfe54f91a83f52 459 Pfam PF02321 Outer membrane efflux protein 40 220 4.3E-5 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DA442_25590 04745e1ceca81fcb00dfe54f91a83f52 459 Pfam PF02321 Outer membrane efflux protein 263 441 3.4E-16 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DA442_25590 04745e1ceca81fcb00dfe54f91a83f52 459 Gene3D G3DSA:1.20.1600.10 4 447 6.1E-37 T 14-10-2018 DA442_23190 faf6a6506feee4369e4e41466c0e7465 405 SUPERFAMILY SSF52540 108 367 1.64E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_23190 faf6a6506feee4369e4e41466c0e7465 405 Gene3D G3DSA:3.40.50.300 107 397 2.5E-56 T 14-10-2018 DA442_23190 faf6a6506feee4369e4e41466c0e7465 405 Pfam PF13614 AAA domain 110 295 1.3E-22 T 14-10-2018 IPR025669 AAA domain DA442_23190 faf6a6506feee4369e4e41466c0e7465 405 Gene3D G3DSA:1.10.1660.30 36 102 8.1E-6 T 14-10-2018 DA442_19930 0d34d08b5bc17b5fdc2cbf0a94be675e 259 SUPERFAMILY SSF46689 207 255 7.17E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_19930 0d34d08b5bc17b5fdc2cbf0a94be675e 259 Pfam PF12833 Helix-turn-helix domain 178 254 1.1E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_19930 0d34d08b5bc17b5fdc2cbf0a94be675e 259 Pfam PF02311 AraC-like ligand binding domain 18 94 3.9E-7 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 DA442_19930 0d34d08b5bc17b5fdc2cbf0a94be675e 259 SMART SM00342 171 253 2.5E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_19930 0d34d08b5bc17b5fdc2cbf0a94be675e 259 SUPERFAMILY SSF51182 29 80 8.67E-9 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DA442_19930 0d34d08b5bc17b5fdc2cbf0a94be675e 259 Gene3D G3DSA:2.60.120.10 4 90 4.8E-7 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DA442_19930 0d34d08b5bc17b5fdc2cbf0a94be675e 259 Gene3D G3DSA:1.10.10.60 156 257 2.4E-19 T 14-10-2018 DA442_01000 5f1cbd9f27ce90d16adbe05d14b2ec63 196 SUPERFAMILY SSF48498 81 191 3.2E-11 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DA442_01000 5f1cbd9f27ce90d16adbe05d14b2ec63 196 SUPERFAMILY SSF46689 5 78 1.99E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_01000 5f1cbd9f27ce90d16adbe05d14b2ec63 196 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 196 41.226 T 14-10-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 DA442_01000 5f1cbd9f27ce90d16adbe05d14b2ec63 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 58 3.0E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DA442_01000 5f1cbd9f27ce90d16adbe05d14b2ec63 196 Gene3D G3DSA:1.10.357.10 3 196 2.9E-77 T 14-10-2018 DA442_22725 988f2c4cf149d83e9d4fc25c34982857 609 Pfam PF04183 IucA / IucC family 163 383 6.9E-51 T 14-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 DA442_22725 988f2c4cf149d83e9d4fc25c34982857 609 Gene3D G3DSA:1.10.340.60 497 568 1.0E-20 T 14-10-2018 DA442_22725 988f2c4cf149d83e9d4fc25c34982857 609 Gene3D G3DSA:3.10.450.440 45 111 7.7E-6 T 14-10-2018 DA442_22725 988f2c4cf149d83e9d4fc25c34982857 609 Pfam PF06276 Ferric iron reductase FhuF-like transporter 430 588 1.0E-28 T 14-10-2018 IPR022770 Ferric iron reductase FhuF domain DA442_22725 988f2c4cf149d83e9d4fc25c34982857 609 Gene3D G3DSA:1.10.150.640 26 149 7.7E-6 T 14-10-2018 DA442_12395 04ffc8f661e69f35887d5ff080de4c0f 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 209 221 1.8E-17 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DA442_12395 04ffc8f661e69f35887d5ff080de4c0f 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 160 174 1.8E-17 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DA442_12395 04ffc8f661e69f35887d5ff080de4c0f 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 277 287 1.8E-17 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DA442_12395 04ffc8f661e69f35887d5ff080de4c0f 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 188 200 1.8E-17 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DA442_12395 04ffc8f661e69f35887d5ff080de4c0f 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 148 160 1.8E-17 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DA442_12395 04ffc8f661e69f35887d5ff080de4c0f 289 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 88 97 1.8E-17 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DA442_12395 04ffc8f661e69f35887d5ff080de4c0f 289 Pfam PF00813 FliP family 92 283 1.1E-78 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DA442_12395 04ffc8f661e69f35887d5ff080de4c0f 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 109 129 4.2E-66 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DA442_12395 04ffc8f661e69f35887d5ff080de4c0f 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 90 109 4.2E-66 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DA442_12395 04ffc8f661e69f35887d5ff080de4c0f 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 261 286 4.2E-66 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DA442_12395 04ffc8f661e69f35887d5ff080de4c0f 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 237 258 4.2E-66 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DA442_12395 04ffc8f661e69f35887d5ff080de4c0f 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 216 236 4.2E-66 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DA442_12395 04ffc8f661e69f35887d5ff080de4c0f 289 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 129 148 4.2E-66 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DA442_12395 04ffc8f661e69f35887d5ff080de4c0f 289 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 92 287 7.7E-82 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DA442_12395 04ffc8f661e69f35887d5ff080de4c0f 289 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 216 231 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DA442_12395 04ffc8f661e69f35887d5ff080de4c0f 289 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 264 276 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DA442_11420 4dd27c4d33aafab892dc09c9d415ea69 405 Gene3D G3DSA:1.10.10.10 2 81 1.1E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_11420 4dd27c4d33aafab892dc09c9d415ea69 405 Pfam PF00480 ROK family 88 390 3.7E-70 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DA442_11420 4dd27c4d33aafab892dc09c9d415ea69 405 SUPERFAMILY SSF46785 10 76 9.09E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_11420 4dd27c4d33aafab892dc09c9d415ea69 405 ProSitePatterns PS01125 ROK family signature. 218 245 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DA442_11420 4dd27c4d33aafab892dc09c9d415ea69 405 SUPERFAMILY SSF53067 86 395 1.2E-54 T 14-10-2018 DA442_11420 4dd27c4d33aafab892dc09c9d415ea69 405 Gene3D G3DSA:3.30.420.40 208 377 7.9E-110 T 14-10-2018 DA442_11420 4dd27c4d33aafab892dc09c9d415ea69 405 Gene3D G3DSA:3.30.420.40 91 387 7.9E-110 T 14-10-2018 DA442_25040 b1121215c99aa647dafabab24b49b7cf 1020 SUPERFAMILY SSF82693 550 600 8.89E-7 T 14-10-2018 DA442_25040 b1121215c99aa647dafabab24b49b7cf 1020 Gene3D G3DSA:3.30.70.1430 551 649 1.3E-229 T 14-10-2018 DA442_25040 b1121215c99aa647dafabab24b49b7cf 1020 Gene3D G3DSA:3.30.2090.10 180 274 1.3E-229 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DA442_25040 b1121215c99aa647dafabab24b49b7cf 1020 Gene3D G3DSA:3.30.70.1440 650 846 1.3E-229 T 14-10-2018 DA442_25040 b1121215c99aa647dafabab24b49b7cf 1020 Gene3D G3DSA:1.20.1640.10 507 998 1.3E-229 T 14-10-2018 DA442_25040 b1121215c99aa647dafabab24b49b7cf 1020 Pfam PF00873 AcrB/AcrD/AcrF family 5 1000 1.0E-152 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_25040 b1121215c99aa647dafabab24b49b7cf 1020 SUPERFAMILY SSF82714 707 781 1.07E-7 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DA442_25040 b1121215c99aa647dafabab24b49b7cf 1020 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 1.2E-19 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_25040 b1121215c99aa647dafabab24b49b7cf 1020 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 1.2E-19 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_25040 b1121215c99aa647dafabab24b49b7cf 1020 PRINTS PR00702 Acriflavin resistance protein family signature 468 491 1.2E-19 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_25040 b1121215c99aa647dafabab24b49b7cf 1020 PRINTS PR00702 Acriflavin resistance protein family signature 390 414 1.2E-19 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_25040 b1121215c99aa647dafabab24b49b7cf 1020 Gene3D G3DSA:3.30.70.1320 137 332 1.3E-229 T 14-10-2018 DA442_25040 b1121215c99aa647dafabab24b49b7cf 1020 SUPERFAMILY SSF82866 784 1003 2.22E-44 T 14-10-2018 DA442_25040 b1121215c99aa647dafabab24b49b7cf 1020 SUPERFAMILY SSF82693 139 326 4.19E-14 T 14-10-2018 DA442_25040 b1121215c99aa647dafabab24b49b7cf 1020 SUPERFAMILY SSF82866 298 495 1.57E-31 T 14-10-2018 DA442_25040 b1121215c99aa647dafabab24b49b7cf 1020 Gene3D G3DSA:3.30.2090.10 701 788 1.3E-229 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DA442_25040 b1121215c99aa647dafabab24b49b7cf 1020 Gene3D G3DSA:3.30.70.1430 41 796 1.3E-229 T 14-10-2018 DA442_25040 b1121215c99aa647dafabab24b49b7cf 1020 SUPERFAMILY SSF82693 41 134 1.04E-16 T 14-10-2018 DA442_25040 b1121215c99aa647dafabab24b49b7cf 1020 SUPERFAMILY SSF82714 185 271 1.44E-13 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DA442_25040 b1121215c99aa647dafabab24b49b7cf 1020 Gene3D G3DSA:1.20.1640.10 13 506 1.3E-229 T 14-10-2018 DA442_00710 c4bc8d99aaa3b679036114ba89e51a3f 147 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 31 8.2E-10 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DA442_00710 c4bc8d99aaa3b679036114ba89e51a3f 147 Pfam PF08334 Type II secretion system (T2SS), protein G 33 141 1.5E-42 T 14-10-2018 IPR013545 Type II secretion system protein G DA442_00710 c4bc8d99aaa3b679036114ba89e51a3f 147 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 9 142 1.7E-57 T 14-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 DA442_00710 c4bc8d99aaa3b679036114ba89e51a3f 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 46 64 4.2E-22 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 DA442_00710 c4bc8d99aaa3b679036114ba89e51a3f 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 10 35 4.2E-22 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 DA442_00710 c4bc8d99aaa3b679036114ba89e51a3f 147 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 30 2.7E-10 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DA442_00710 c4bc8d99aaa3b679036114ba89e51a3f 147 Gene3D G3DSA:3.30.700.10 33 141 3.8E-44 T 14-10-2018 DA442_00710 c4bc8d99aaa3b679036114ba89e51a3f 147 SUPERFAMILY SSF54523 36 142 3.19E-38 T 14-10-2018 DA442_00710 c4bc8d99aaa3b679036114ba89e51a3f 147 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DA442_00835 aa5786e3bf1f603ececde4a6f8a5238f 90 SMART SM01409 8 61 1.9E-16 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 DA442_00835 aa5786e3bf1f603ececde4a6f8a5238f 90 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 1.5E-29 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DA442_00835 aa5786e3bf1f603ececde4a6f8a5238f 90 SUPERFAMILY SSF63562 1 78 5.1E-26 T 14-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 DA442_00835 aa5786e3bf1f603ececde4a6f8a5238f 90 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.947 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DA442_00835 aa5786e3bf1f603ececde4a6f8a5238f 90 Pfam PF01192 RNA polymerase Rpb6 10 60 1.1E-17 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 DA442_00835 aa5786e3bf1f603ececde4a6f8a5238f 90 Gene3D G3DSA:3.90.940.10 1 90 6.2E-30 T 14-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 DA442_00780 12684c6d4c23b6e23ef50727cf687ebb 773 Gene3D G3DSA:2.40.50.140 631 725 7.6E-29 T 14-10-2018 DA442_00780 12684c6d4c23b6e23ef50727cf687ebb 773 SMART SM00732 326 424 2.5E-38 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 DA442_00780 12684c6d4c23b6e23ef50727cf687ebb 773 Gene3D G3DSA:1.10.3500.10 112 498 9.1E-158 T 14-10-2018 IPR023323 Tex-like domain superfamily DA442_00780 12684c6d4c23b6e23ef50727cf687ebb 773 Gene3D G3DSA:1.10.150.310 499 630 5.8E-50 T 14-10-2018 DA442_00780 12684c6d4c23b6e23ef50727cf687ebb 773 SMART SM00316 649 720 1.2E-24 T 14-10-2018 IPR022967 RNA-binding domain, S1 DA442_00780 12684c6d4c23b6e23ef50727cf687ebb 773 SUPERFAMILY SSF47781 470 557 1.45E-26 T 14-10-2018 IPR010994 RuvA domain 2-like DA442_00780 12684c6d4c23b6e23ef50727cf687ebb 773 SUPERFAMILY SSF47781 560 632 3.78E-19 T 14-10-2018 IPR010994 RuvA domain 2-like DA442_00780 12684c6d4c23b6e23ef50727cf687ebb 773 Pfam PF00575 S1 RNA binding domain 649 720 7.4E-21 T 14-10-2018 IPR003029 S1 domain GO:0003676 DA442_00780 12684c6d4c23b6e23ef50727cf687ebb 773 Pfam PF09371 Tex-like protein N-terminal domain 9 192 7.4E-72 T 14-10-2018 IPR018974 Tex-like protein, N-terminal DA442_00780 12684c6d4c23b6e23ef50727cf687ebb 773 Gene3D G3DSA:1.10.10.650 2 109 4.0E-42 T 14-10-2018 IPR023319 Tex-like protein, HTH domain superfamily DA442_00780 12684c6d4c23b6e23ef50727cf687ebb 773 SUPERFAMILY SSF53098 322 469 5.92E-51 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DA442_00780 12684c6d4c23b6e23ef50727cf687ebb 773 Gene3D G3DSA:3.30.420.140 325 451 9.1E-158 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 DA442_00780 12684c6d4c23b6e23ef50727cf687ebb 773 SUPERFAMILY SSF50249 638 723 4.1E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_00780 12684c6d4c23b6e23ef50727cf687ebb 773 Pfam PF12836 Helix-hairpin-helix motif 491 555 2.8E-27 T 14-10-2018 DA442_00780 12684c6d4c23b6e23ef50727cf687ebb 773 Pfam PF16921 Tex protein YqgF-like domain 327 451 8.9E-56 T 14-10-2018 IPR032639 Tex protein, YqgF-like domain DA442_00780 12684c6d4c23b6e23ef50727cf687ebb 773 SUPERFAMILY SSF158832 3 321 4.32E-121 T 14-10-2018 DA442_25110 0bd48643aaced8d177739382cb4b2d91 130 Pfam PF12614 Ribosome recycling factor 4 128 1.2E-58 T 14-10-2018 IPR022253 Ribosome recycling factor. bacterial DA442_14965 b93b49d1ce4822e93ef0b6cc7648aff4 251 Pfam PF04794 YdjC-like protein 2 230 1.2E-52 T 14-10-2018 IPR006879 Carbohydrate deacetylase YdjC-like DA442_14965 b93b49d1ce4822e93ef0b6cc7648aff4 251 SUPERFAMILY SSF88713 1 242 7.11E-68 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DA442_14965 b93b49d1ce4822e93ef0b6cc7648aff4 251 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 1 239 40.048 T 14-10-2018 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 DA442_14965 b93b49d1ce4822e93ef0b6cc7648aff4 251 Gene3D G3DSA:3.20.20.370 1 243 2.8E-71 T 14-10-2018 DA442_06335 c9906830eaf2cbd709afe65b35e9cdf5 439 Gene3D G3DSA:1.20.1090.10 214 411 1.8E-38 T 14-10-2018 DA442_06335 c9906830eaf2cbd709afe65b35e9cdf5 439 SUPERFAMILY SSF56796 27 407 4.97E-87 T 14-10-2018 DA442_06335 c9906830eaf2cbd709afe65b35e9cdf5 439 Pfam PF00465 Iron-containing alcohol dehydrogenase 35 399 3.4E-88 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 DA442_06335 c9906830eaf2cbd709afe65b35e9cdf5 439 Gene3D G3DSA:3.40.50.1970 21 207 6.8E-48 T 14-10-2018 DA442_13030 1782360d9848a43973a4ae3318637f14 297 SUPERFAMILY SSF48179 168 291 3.2E-35 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DA442_13030 1782360d9848a43973a4ae3318637f14 297 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 168 291 5.4E-36 T 14-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain DA442_13030 1782360d9848a43973a4ae3318637f14 297 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 3 293 4.0E-78 T 14-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 DA442_13030 1782360d9848a43973a4ae3318637f14 297 SUPERFAMILY SSF51735 3 166 6.23E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_13030 1782360d9848a43973a4ae3318637f14 297 Gene3D G3DSA:3.40.50.720 2 167 3.6E-50 T 14-10-2018 DA442_13030 1782360d9848a43973a4ae3318637f14 297 Gene3D G3DSA:1.10.1040.10 168 297 1.3E-41 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DA442_13030 1782360d9848a43973a4ae3318637f14 297 Pfam PF02558 Ketopantoate reductase PanE/ApbA 4 142 2.1E-30 T 14-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain DA442_04690 6e2a8f6c2f85313bf757e5101ec26260 242 SUPERFAMILY SSF53901 37 160 6.2E-6 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DA442_04690 6e2a8f6c2f85313bf757e5101ec26260 242 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 28 239 3.8E-76 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal DA442_00540 032abbf7cdc77cf75eeb2ef17f3be5d4 353 SMART SM01004 9 333 9.1E-246 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DA442_00540 032abbf7cdc77cf75eeb2ef17f3be5d4 353 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 332 1.1E-141 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DA442_00540 032abbf7cdc77cf75eeb2ef17f3be5d4 353 SUPERFAMILY SSF51569 7 335 2.2E-145 T 14-10-2018 DA442_00540 032abbf7cdc77cf75eeb2ef17f3be5d4 353 PIRSF PIRSF001415 2 336 2.1E-152 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DA442_00540 032abbf7cdc77cf75eeb2ef17f3be5d4 353 Gene3D G3DSA:3.20.20.70 2 337 7.7E-148 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_00540 032abbf7cdc77cf75eeb2ef17f3be5d4 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 1.7E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DA442_00540 032abbf7cdc77cf75eeb2ef17f3be5d4 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 1.7E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DA442_00540 032abbf7cdc77cf75eeb2ef17f3be5d4 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 1.7E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DA442_00540 032abbf7cdc77cf75eeb2ef17f3be5d4 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 1.7E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DA442_00540 032abbf7cdc77cf75eeb2ef17f3be5d4 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 1.7E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DA442_00540 032abbf7cdc77cf75eeb2ef17f3be5d4 353 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 1.7E-57 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DA442_00540 032abbf7cdc77cf75eeb2ef17f3be5d4 353 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 14-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DA442_17565 8c330fd1f7f374baaf7239162aaa6322 544 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 201 217 2.2E-19 T 14-10-2018 DA442_17565 8c330fd1f7f374baaf7239162aaa6322 544 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 305 317 2.2E-19 T 14-10-2018 DA442_17565 8c330fd1f7f374baaf7239162aaa6322 544 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 350 374 2.2E-19 T 14-10-2018 DA442_17565 8c330fd1f7f374baaf7239162aaa6322 544 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 231 245 2.2E-19 T 14-10-2018 DA442_17565 8c330fd1f7f374baaf7239162aaa6322 544 SUPERFAMILY SSF53335 10 543 2.03E-99 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_17565 8c330fd1f7f374baaf7239162aaa6322 544 Gene3D G3DSA:3.40.50.150 179 485 7.6E-64 T 14-10-2018 DA442_17565 8c330fd1f7f374baaf7239162aaa6322 544 Pfam PF02384 N-6 DNA Methylase 179 497 2.2E-64 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 DA442_17565 8c330fd1f7f374baaf7239162aaa6322 544 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 308 314 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DA442_25380 a6f159a48792b4cfbd02d8475ee9df71 178 SUPERFAMILY SSF89028 7 169 2.16E-36 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 DA442_25380 a6f159a48792b4cfbd02d8475ee9df71 178 Gene3D G3DSA:1.20.1200.10 17 173 2.4E-22 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 DA442_25380 a6f159a48792b4cfbd02d8475ee9df71 178 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 28 149 2.0E-66 T 14-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 DA442_25380 a6f159a48792b4cfbd02d8475ee9df71 178 Pfam PF01923 Cobalamin adenosyltransferase 19 156 3.4E-14 T 14-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 DA442_22635 0499fc7cc0af0589bac2585ee5065499 425 Pfam PF02264 LamB porin 25 425 3.4E-125 T 14-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 DA442_22635 0499fc7cc0af0589bac2585ee5065499 425 Hamap MF_01301 Maltoporin [lamB]. 1 425 47.226 T 14-10-2018 IPR023738 Maltoporin GO:0009279|GO:0015481|GO:0015768|GO:0042956|GO:0042958 DA442_22635 0499fc7cc0af0589bac2585ee5065499 425 Gene3D G3DSA:2.40.170.10 23 425 1.2E-136 T 14-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 DA442_22635 0499fc7cc0af0589bac2585ee5065499 425 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 30 420 0.0 T 14-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 DA442_22635 0499fc7cc0af0589bac2585ee5065499 425 SUPERFAMILY SSF56935 23 425 1.1E-131 T 14-10-2018 DA442_06010 a261d8a0fc7e456af445de2b55a30636 320 Gene3D G3DSA:1.10.3720.10 69 308 3.4E-23 T 14-10-2018 IPR035906 MetI-like superfamily DA442_06010 a261d8a0fc7e456af445de2b55a30636 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 314 1.8E-42 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DA442_06010 a261d8a0fc7e456af445de2b55a30636 320 SUPERFAMILY SSF161098 69 298 1.18E-19 T 14-10-2018 IPR035906 MetI-like superfamily DA442_23495 bc307accefb314dbaefcd0fca073bfa8 559 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 403 417 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_23495 bc307accefb314dbaefcd0fca073bfa8 559 SUPERFAMILY SSF55120 350 556 2.24E-57 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_23495 bc307accefb314dbaefcd0fca073bfa8 559 Gene3D G3DSA:3.30.2350.10 347 559 1.2E-60 T 14-10-2018 DA442_23495 bc307accefb314dbaefcd0fca073bfa8 559 Pfam PF00849 RNA pseudouridylate synthase 365 512 1.7E-27 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_12730 84977087212d4efb591625bbb3358b3b 1159 SMART SM00481 7 74 3.4E-25 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal DA442_12730 84977087212d4efb591625bbb3358b3b 1159 Gene3D G3DSA:1.10.10.1600 433 510 2.3E-32 T 14-10-2018 DA442_12730 84977087212d4efb591625bbb3358b3b 1159 SUPERFAMILY SSF50249 976 1064 2.4E-5 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_12730 84977087212d4efb591625bbb3358b3b 1159 Pfam PF02811 PHP domain 8 171 1.5E-42 T 14-10-2018 IPR004013 PHP domain GO:0003824 DA442_12730 84977087212d4efb591625bbb3358b3b 1159 Pfam PF14579 Helix-hairpin-helix motif 809 897 7.0E-26 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_12730 84977087212d4efb591625bbb3358b3b 1159 Gene3D G3DSA:3.20.20.140 1 270 4.4E-91 T 14-10-2018 DA442_12730 84977087212d4efb591625bbb3358b3b 1159 Pfam PF01336 OB-fold nucleic acid binding domain 993 1071 9.0E-11 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 DA442_12730 84977087212d4efb591625bbb3358b3b 1159 Gene3D G3DSA:2.40.50.140 983 1072 4.0E-9 T 14-10-2018 DA442_12730 84977087212d4efb591625bbb3358b3b 1159 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1030 0.0 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_12730 84977087212d4efb591625bbb3358b3b 1159 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 292 735 1.5E-174 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_12730 84977087212d4efb591625bbb3358b3b 1159 SUPERFAMILY SSF89550 5 263 1.71E-12 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 DA442_12590 37d655ce0f30ca1bf25c11a88432c3ec 483 SMART SM00028 306 339 45.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_12590 37d655ce0f30ca1bf25c11a88432c3ec 483 SMART SM00028 340 373 23.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_12590 37d655ce0f30ca1bf25c11a88432c3ec 483 SMART SM00028 425 458 140.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_12590 37d655ce0f30ca1bf25c11a88432c3ec 483 Pfam PF01435 Peptidase family M48 69 253 2.4E-27 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 DA442_12590 37d655ce0f30ca1bf25c11a88432c3ec 483 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 3 482 40.241 T 14-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 DA442_12590 37d655ce0f30ca1bf25c11a88432c3ec 483 Gene3D G3DSA:1.25.40.10 285 467 3.3E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_12590 37d655ce0f30ca1bf25c11a88432c3ec 483 Pfam PF14559 Tetratricopeptide repeat 351 416 4.2E-12 T 14-10-2018 DA442_12590 37d655ce0f30ca1bf25c11a88432c3ec 483 SUPERFAMILY SSF48452 310 453 6.17E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_12590 37d655ce0f30ca1bf25c11a88432c3ec 483 Gene3D G3DSA:3.30.2010.10 75 147 1.2E-6 T 14-10-2018 DA442_02700 bed17b15d4c2f843adc5bb56f39970c2 296 SUPERFAMILY SSF53850 90 288 6.05E-26 T 14-10-2018 DA442_02700 bed17b15d4c2f843adc5bb56f39970c2 296 Pfam PF03466 LysR substrate binding domain 96 288 2.3E-13 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_02700 bed17b15d4c2f843adc5bb56f39970c2 296 Gene3D G3DSA:3.40.190.290 95 293 3.5E-10 T 14-10-2018 DA442_02700 bed17b15d4c2f843adc5bb56f39970c2 296 Gene3D G3DSA:1.10.10.10 4 92 5.2E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_02700 bed17b15d4c2f843adc5bb56f39970c2 296 SUPERFAMILY SSF46785 2 85 1.03E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_02700 bed17b15d4c2f843adc5bb56f39970c2 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 3.6E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_15400 35f0ad4d30d16e98f22c7dd9c37c3889 1226 Pfam PF02310 B12 binding domain 749 842 4.4E-18 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 DA442_15400 35f0ad4d30d16e98f22c7dd9c37c3889 1226 Gene3D G3DSA:3.20.20.330 2 339 4.3E-129 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 DA442_15400 35f0ad4d30d16e98f22c7dd9c37c3889 1226 Gene3D G3DSA:3.10.196.10 909 1224 5.0E-145 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DA442_15400 35f0ad4d30d16e98f22c7dd9c37c3889 1226 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 940 1210 9.1E-123 T 14-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DA442_15400 35f0ad4d30d16e98f22c7dd9c37c3889 1226 SUPERFAMILY SSF47644 654 740 3.4E-29 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DA442_15400 35f0ad4d30d16e98f22c7dd9c37c3889 1226 TIGRFAM TIGR02082 metH: methionine synthase 13 1194 0.0 T 14-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DA442_15400 35f0ad4d30d16e98f22c7dd9c37c3889 1226 SUPERFAMILY SSF52242 744 895 2.35E-46 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 DA442_15400 35f0ad4d30d16e98f22c7dd9c37c3889 1226 SUPERFAMILY SSF56507 903 1225 7.85E-133 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DA442_15400 35f0ad4d30d16e98f22c7dd9c37c3889 1226 Gene3D G3DSA:1.10.1240.10 650 738 2.1E-40 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DA442_15400 35f0ad4d30d16e98f22c7dd9c37c3889 1226 PIRSF PIRSF000381 3 1197 0.0 T 14-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DA442_15400 35f0ad4d30d16e98f22c7dd9c37c3889 1226 Gene3D G3DSA:3.40.50.280 745 896 4.9E-57 T 14-10-2018 DA442_15400 35f0ad4d30d16e98f22c7dd9c37c3889 1226 SUPERFAMILY SSF82282 8 400 3.4E-119 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 DA442_15400 35f0ad4d30d16e98f22c7dd9c37c3889 1226 Pfam PF00809 Pterin binding enzyme 361 599 1.8E-59 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DA442_15400 35f0ad4d30d16e98f22c7dd9c37c3889 1226 Pfam PF02574 Homocysteine S-methyltransferase 18 326 1.3E-81 T 14-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 DA442_15400 35f0ad4d30d16e98f22c7dd9c37c3889 1226 Gene3D G3DSA:3.20.20.20 341 643 8.3E-131 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DA442_15400 35f0ad4d30d16e98f22c7dd9c37c3889 1226 SMART SM01018 658 741 6.7E-46 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DA442_15400 35f0ad4d30d16e98f22c7dd9c37c3889 1226 Gene3D G3DSA:1.10.288.10 938 1094 5.0E-145 T 14-10-2018 DA442_15400 35f0ad4d30d16e98f22c7dd9c37c3889 1226 SUPERFAMILY SSF51717 357 631 3.14E-88 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DA442_15400 35f0ad4d30d16e98f22c7dd9c37c3889 1226 Pfam PF02607 B12 binding domain 660 734 4.6E-25 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DA442_02970 0f343c436571f863e2331d640ab352bc 696 SUPERFAMILY SSF56024 500 684 6.28E-70 T 14-10-2018 DA442_02970 0f343c436571f863e2331d640ab352bc 696 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 681 27.51 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 DA442_02970 0f343c436571f863e2331d640ab352bc 696 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 677 9.6E-264 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 DA442_02970 0f343c436571f863e2331d640ab352bc 696 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 2.7E-31 T 14-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 DA442_02970 0f343c436571f863e2331d640ab352bc 696 SUPERFAMILY SSF140356 4 104 4.05E-32 T 14-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 DA442_02970 0f343c436571f863e2331d640ab352bc 696 SUPERFAMILY SSF143724 107 313 8.24E-64 T 14-10-2018 DA442_02970 0f343c436571f863e2331d640ab352bc 696 Gene3D G3DSA:1.20.58.310 9 109 4.4E-36 T 14-10-2018 DA442_02970 0f343c436571f863e2331d640ab352bc 696 Pfam PF02503 Polyphosphate kinase middle domain 119 320 4.1E-47 T 14-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 DA442_02970 0f343c436571f863e2331d640ab352bc 696 PIRSF PIRSF015589 1 694 3.7E-253 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 DA442_02970 0f343c436571f863e2331d640ab352bc 696 SUPERFAMILY SSF56024 315 496 1.29E-53 T 14-10-2018 DA442_02970 0f343c436571f863e2331d640ab352bc 696 Gene3D G3DSA:3.30.1840.10 110 307 9.9E-76 T 14-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 DA442_02970 0f343c436571f863e2331d640ab352bc 696 Gene3D G3DSA:3.30.870.10 500 686 4.9E-74 T 14-10-2018 DA442_02970 0f343c436571f863e2331d640ab352bc 696 Pfam PF13090 Polyphosphate kinase C-terminal domain 331 676 5.3E-145 T 14-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 DA442_02970 0f343c436571f863e2331d640ab352bc 696 Gene3D G3DSA:3.30.870.10 319 499 3.2E-72 T 14-10-2018 DA442_02475 497287daa96c4d75804f531f757d3f85 1487 Pfam PF01645 Conserved region in glutamate synthase 794 1157 3.1E-153 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 DA442_02475 497287daa96c4d75804f531f757d3f85 1487 SUPERFAMILY SSF51395 434 1191 1.75E-251 T 14-10-2018 DA442_02475 497287daa96c4d75804f531f757d3f85 1487 Pfam PF01493 GXGXG motif 1236 1419 5.9E-74 T 14-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 DA442_02475 497287daa96c4d75804f531f757d3f85 1487 Gene3D G3DSA:3.20.20.70 484 1172 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_02475 497287daa96c4d75804f531f757d3f85 1487 Pfam PF00310 Glutamine amidotransferases class-II 13 426 5.4E-177 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain DA442_02475 497287daa96c4d75804f531f757d3f85 1487 Gene3D G3DSA:2.160.20.60 1200 1468 4.1E-101 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 DA442_02475 497287daa96c4d75804f531f757d3f85 1487 SUPERFAMILY SSF69336 1214 1464 1.44E-87 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 DA442_02475 497287daa96c4d75804f531f757d3f85 1487 Gene3D G3DSA:3.60.20.10 13 546 0.0 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DA442_02475 497287daa96c4d75804f531f757d3f85 1487 Gene3D G3DSA:3.20.20.70 431 793 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_02475 497287daa96c4d75804f531f757d3f85 1487 SUPERFAMILY SSF56235 13 429 1.78E-148 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DA442_02475 497287daa96c4d75804f531f757d3f85 1487 Pfam PF04898 Glutamate synthase central domain 458 738 6.2E-102 T 14-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 DA442_04625 a47ea12d5dfab3c5037791a3b6b7892c 395 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 97 236 5.7E-21 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal DA442_04625 a47ea12d5dfab3c5037791a3b6b7892c 395 SUPERFAMILY SSF53901 7 236 4.98E-39 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DA442_04625 a47ea12d5dfab3c5037791a3b6b7892c 395 SUPERFAMILY SSF53901 210 391 2.95E-46 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DA442_04625 a47ea12d5dfab3c5037791a3b6b7892c 395 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site DA442_04625 a47ea12d5dfab3c5037791a3b6b7892c 395 Gene3D G3DSA:3.40.47.10 26 242 4.0E-32 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DA442_04625 a47ea12d5dfab3c5037791a3b6b7892c 395 SMART SM00825 Beta-ketoacyl synthase 41 338 1.4E-9 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DA442_04625 a47ea12d5dfab3c5037791a3b6b7892c 395 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 244 351 2.3E-27 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal DA442_04625 a47ea12d5dfab3c5037791a3b6b7892c 395 Gene3D G3DSA:3.40.47.10 246 389 2.9E-41 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DA442_25250 1c0e3b858aaa0ebb296c030f1f31b56e 262 Gene3D G3DSA:1.10.10.60 156 261 4.5E-24 T 14-10-2018 DA442_25250 1c0e3b858aaa0ebb296c030f1f31b56e 262 SUPERFAMILY SSF51182 20 185 3.78E-10 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DA442_25250 1c0e3b858aaa0ebb296c030f1f31b56e 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 242 258 4.3E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DA442_25250 1c0e3b858aaa0ebb296c030f1f31b56e 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 227 242 4.3E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DA442_25250 1c0e3b858aaa0ebb296c030f1f31b56e 262 SUPERFAMILY SSF46689 213 260 1.08E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_25250 1c0e3b858aaa0ebb296c030f1f31b56e 262 Pfam PF12833 Helix-turn-helix domain 182 260 1.6E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_25250 1c0e3b858aaa0ebb296c030f1f31b56e 262 SMART SM00342 176 258 2.3E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_10805 8543811888cb69fb78d032847b19d51f 345 Gene3D G3DSA:1.20.1420.20 27 345 1.4E-75 T 14-10-2018 IPR038352 Imelysin-like domain superfamily DA442_10805 8543811888cb69fb78d032847b19d51f 345 Pfam PF09375 Imelysin 48 324 1.8E-43 T 14-10-2018 IPR018976 Imelysin-like domain DA442_11595 70da0cd434ad9e5df338da06ee815a23 688 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 14 540 1.1E-201 T 14-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DA442_11595 70da0cd434ad9e5df338da06ee815a23 688 Hamap MF_00098 Methionine--tRNA ligase [metG]. 11 550 41.626 T 14-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DA442_11595 70da0cd434ad9e5df338da06ee815a23 688 SUPERFAMILY SSF50249 583 687 1.86E-32 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_11595 70da0cd434ad9e5df338da06ee815a23 688 SUPERFAMILY SSF57770 147 181 4.19E-13 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DA442_11595 70da0cd434ad9e5df338da06ee815a23 688 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 549 687 8.6E-47 T 14-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DA442_11595 70da0cd434ad9e5df338da06ee815a23 688 Gene3D G3DSA:1.10.730.10 394 531 3.4E-35 T 14-10-2018 DA442_11595 70da0cd434ad9e5df338da06ee815a23 688 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 20 31 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DA442_11595 70da0cd434ad9e5df338da06ee815a23 688 SUPERFAMILY SSF47323 394 552 1.18E-45 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DA442_11595 70da0cd434ad9e5df338da06ee815a23 688 Pfam PF01588 Putative tRNA binding domain 593 685 6.1E-26 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 DA442_11595 70da0cd434ad9e5df338da06ee815a23 688 Gene3D G3DSA:2.40.50.140 577 688 8.7E-35 T 14-10-2018 DA442_11595 70da0cd434ad9e5df338da06ee815a23 688 Pfam PF09334 tRNA synthetases class I (M) 14 401 4.3E-166 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 DA442_11595 70da0cd434ad9e5df338da06ee815a23 688 Gene3D G3DSA:3.40.50.620 14 389 4.1E-162 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DA442_11595 70da0cd434ad9e5df338da06ee815a23 688 PRINTS PR01041 Methionyl-tRNA synthetase signature 15 28 5.6E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DA442_11595 70da0cd434ad9e5df338da06ee815a23 688 PRINTS PR01041 Methionyl-tRNA synthetase signature 296 311 5.6E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DA442_11595 70da0cd434ad9e5df338da06ee815a23 688 PRINTS PR01041 Methionyl-tRNA synthetase signature 47 61 5.6E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DA442_11595 70da0cd434ad9e5df338da06ee815a23 688 PRINTS PR01041 Methionyl-tRNA synthetase signature 256 267 5.6E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DA442_11595 70da0cd434ad9e5df338da06ee815a23 688 PRINTS PR01041 Methionyl-tRNA synthetase signature 389 400 5.6E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DA442_11595 70da0cd434ad9e5df338da06ee815a23 688 PRINTS PR01041 Methionyl-tRNA synthetase signature 95 106 5.6E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DA442_11595 70da0cd434ad9e5df338da06ee815a23 688 SUPERFAMILY SSF52374 10 392 9.98E-102 T 14-10-2018 DA442_11595 70da0cd434ad9e5df338da06ee815a23 688 Gene3D G3DSA:2.20.28.20 147 181 4.1E-162 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DA442_25005 51e5f3960984d911b0b804e5b8ddd464 539 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 48 523 8.1E-144 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 DA442_15770 b4ec6161a54547fbc58a9a18640dbc37 260 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 164 251 1.4E-29 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DA442_15770 b4ec6161a54547fbc58a9a18640dbc37 260 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 37 157 5.6E-33 T 14-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 DA442_15770 b4ec6161a54547fbc58a9a18640dbc37 260 SUPERFAMILY SSF54534 46 253 2.95E-64 T 14-10-2018 DA442_15770 b4ec6161a54547fbc58a9a18640dbc37 260 Gene3D G3DSA:1.10.287.460 31 148 2.2E-32 T 14-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 DA442_15770 b4ec6161a54547fbc58a9a18640dbc37 260 Gene3D G3DSA:3.10.50.40 149 260 3.1E-43 T 14-10-2018 DA442_20815 8b79bd6f229e766d7fe13b677fd75f4b 200 Gene3D G3DSA:3.40.50.1000 11 191 2.2E-43 T 14-10-2018 IPR023214 HAD superfamily DA442_20815 8b79bd6f229e766d7fe13b677fd75f4b 200 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 9 189 2.5E-55 T 14-10-2018 IPR010976 Beta-phosphoglucomutase hydrolase DA442_20815 8b79bd6f229e766d7fe13b677fd75f4b 200 SUPERFAMILY SSF56784 8 193 2.13E-44 T 14-10-2018 IPR036412 HAD-like superfamily DA442_20815 8b79bd6f229e766d7fe13b677fd75f4b 200 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 128 189 3.9E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DA442_20815 8b79bd6f229e766d7fe13b677fd75f4b 200 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 189 2.2E-26 T 14-10-2018 DA442_20815 8b79bd6f229e766d7fe13b677fd75f4b 200 Gene3D G3DSA:1.10.150.240 22 94 2.2E-43 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DA442_20405 cf782f09db835b9737e2f714179e1570 394 SMART SM00382 52 253 3.7E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_20405 cf782f09db835b9737e2f714179e1570 394 Pfam PF00005 ABC transporter 43 195 3.3E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_20405 cf782f09db835b9737e2f714179e1570 394 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_20405 cf782f09db835b9737e2f714179e1570 394 SUPERFAMILY SSF52540 42 273 8.17E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_20405 cf782f09db835b9737e2f714179e1570 394 SUPERFAMILY SSF54631 332 388 3.8E-6 T 14-10-2018 DA442_20405 cf782f09db835b9737e2f714179e1570 394 Gene3D G3DSA:3.40.50.300 30 303 1.2E-69 T 14-10-2018 DA442_20405 cf782f09db835b9737e2f714179e1570 394 TIGRFAM TIGR03415 ABC_choXWV_ATP: choline ABC transporter, ATP-binding protein 4 386 2.8E-179 T 14-10-2018 IPR022473 ABC transporter, Choline, ATP-binding subunit GO:0015220|GO:0015871|GO:0055052 DA442_20405 cf782f09db835b9737e2f714179e1570 394 Gene3D G3DSA:3.10.580.10 321 393 5.5E-5 T 14-10-2018 DA442_05345 9226399360a3f1083f524f77c665b772 405 SUPERFAMILY SSF51161 292 403 3.68E-15 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily DA442_05345 9226399360a3f1083f524f77c665b772 405 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 403 48.475 T 14-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 DA442_05345 9226399360a3f1083f524f77c665b772 405 Pfam PF00483 Nucleotidyl transferase 6 273 2.8E-63 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 DA442_05345 9226399360a3f1083f524f77c665b772 405 SUPERFAMILY SSF53448 4 358 2.58E-70 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DA442_05345 9226399360a3f1083f524f77c665b772 405 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 95 103 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 DA442_05345 9226399360a3f1083f524f77c665b772 405 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 DA442_05345 9226399360a3f1083f524f77c665b772 405 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 4 377 3.0E-154 T 14-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 DA442_05345 9226399360a3f1083f524f77c665b772 405 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 193 203 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 DA442_05345 9226399360a3f1083f524f77c665b772 405 Gene3D G3DSA:3.90.550.10 2 286 2.2E-83 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DA442_05345 9226399360a3f1083f524f77c665b772 405 Gene3D G3DSA:2.160.10.10 287 403 8.7E-33 T 14-10-2018 DA442_09255 62dc83ad9d3ff796b30f90c15ceda6b9 494 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 264 271 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DA442_09255 62dc83ad9d3ff796b30f90c15ceda6b9 494 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 293 304 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DA442_09255 62dc83ad9d3ff796b30f90c15ceda6b9 494 SUPERFAMILY SSF53720 7 492 1.57E-168 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DA442_09255 62dc83ad9d3ff796b30f90c15ceda6b9 494 Gene3D G3DSA:3.40.309.10 269 458 7.3E-181 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DA442_09255 62dc83ad9d3ff796b30f90c15ceda6b9 494 Pfam PF00171 Aldehyde dehydrogenase family 33 487 3.5E-173 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DA442_09255 62dc83ad9d3ff796b30f90c15ceda6b9 494 Gene3D G3DSA:3.40.605.10 22 486 7.3E-181 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DA442_03545 cc2bd9c9c9b16fb499c0423ec33cc38f 482 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 2.6E-73 T 14-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 DA442_03545 cc2bd9c9c9b16fb499c0423ec33cc38f 482 SMART SM00981 75 165 8.2E-26 T 14-10-2018 IPR004114 THUMP domain GO:0003723 DA442_03545 cc2bd9c9c9b16fb499c0423ec33cc38f 482 Gene3D G3DSA:3.40.250.10 400 482 1.6E-10 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily DA442_03545 cc2bd9c9c9b16fb499c0423ec33cc38f 482 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 382 482 1.9E-42 T 14-10-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 KEGG: 00730+2.8.1.4 DA442_03545 cc2bd9c9c9b16fb499c0423ec33cc38f 482 SUPERFAMILY SSF52402 174 372 1.17E-42 T 14-10-2018 DA442_03545 cc2bd9c9c9b16fb499c0423ec33cc38f 482 Gene3D G3DSA:3.30.2130.30 1 174 2.0E-33 T 14-10-2018 DA442_03545 cc2bd9c9c9b16fb499c0423ec33cc38f 482 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 376 1.5E-114 T 14-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 DA442_03545 cc2bd9c9c9b16fb499c0423ec33cc38f 482 Pfam PF02926 THUMP domain 45 158 2.5E-24 T 14-10-2018 IPR004114 THUMP domain GO:0003723 DA442_03545 cc2bd9c9c9b16fb499c0423ec33cc38f 482 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 482 224.789 T 14-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 DA442_03545 cc2bd9c9c9b16fb499c0423ec33cc38f 482 SUPERFAMILY SSF52821 402 481 1.83E-12 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily DA442_03545 cc2bd9c9c9b16fb499c0423ec33cc38f 482 SUPERFAMILY SSF143437 1 173 1.92E-47 T 14-10-2018 DA442_03545 cc2bd9c9c9b16fb499c0423ec33cc38f 482 Gene3D G3DSA:3.40.50.620 175 399 6.4E-52 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DA442_04310 f9961ffdcee1212b287d7de5c3d40bfa 634 SUPERFAMILY SSF54211 238 493 9.86E-100 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DA442_04310 f9961ffdcee1212b287d7de5c3d40bfa 634 Gene3D G3DSA:1.20.120.790 501 632 2.3E-42 T 14-10-2018 IPR037196 HSP90, C-terminal domain DA442_04310 f9961ffdcee1212b287d7de5c3d40bfa 634 Pfam PF00183 Hsp90 protein 227 632 3.0E-127 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 DA442_04310 f9961ffdcee1212b287d7de5c3d40bfa 634 SUPERFAMILY SSF110942 520 632 7.98E-34 T 14-10-2018 IPR037196 HSP90, C-terminal domain DA442_04310 f9961ffdcee1212b287d7de5c3d40bfa 634 PRINTS PR00775 90kDa heat shock protein signature 177 194 6.2E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal DA442_04310 f9961ffdcee1212b287d7de5c3d40bfa 634 PRINTS PR00775 90kDa heat shock protein signature 195 213 6.2E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal DA442_04310 f9961ffdcee1212b287d7de5c3d40bfa 634 PRINTS PR00775 90kDa heat shock protein signature 31 53 6.2E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal DA442_04310 f9961ffdcee1212b287d7de5c3d40bfa 634 PRINTS PR00775 90kDa heat shock protein signature 80 97 6.2E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal DA442_04310 f9961ffdcee1212b287d7de5c3d40bfa 634 PRINTS PR00775 90kDa heat shock protein signature 98 115 6.2E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal DA442_04310 f9961ffdcee1212b287d7de5c3d40bfa 634 PRINTS PR00775 90kDa heat shock protein signature 10 30 6.2E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal DA442_04310 f9961ffdcee1212b287d7de5c3d40bfa 634 PRINTS PR00775 90kDa heat shock protein signature 125 147 6.2E-62 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal DA442_04310 f9961ffdcee1212b287d7de5c3d40bfa 634 PIRSF PIRSF002583 1 634 6.2E-213 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 DA442_04310 f9961ffdcee1212b287d7de5c3d40bfa 634 Hamap MF_00505 Chaperone protein HtpG [htpG]. 7 632 32.373 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 DA442_04310 f9961ffdcee1212b287d7de5c3d40bfa 634 Gene3D G3DSA:3.30.230.80 237 409 1.1E-70 T 14-10-2018 DA442_04310 f9961ffdcee1212b287d7de5c3d40bfa 634 SMART SM00387 32 189 6.9E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_04310 f9961ffdcee1212b287d7de5c3d40bfa 634 Gene3D G3DSA:3.30.565.10 6 219 9.1E-76 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_04310 f9961ffdcee1212b287d7de5c3d40bfa 634 Gene3D G3DSA:3.40.50.11260 410 500 2.3E-34 T 14-10-2018 DA442_04310 f9961ffdcee1212b287d7de5c3d40bfa 634 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 30 39 - T 14-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 DA442_04310 f9961ffdcee1212b287d7de5c3d40bfa 634 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 176 1.3E-12 T 14-10-2018 DA442_04310 f9961ffdcee1212b287d7de5c3d40bfa 634 SUPERFAMILY SSF55874 10 215 5.11E-63 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_20510 d972b1a3595aec6d6377c76887fe48bf 873 SMART SM00448 741 857 3.0E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_20510 d972b1a3595aec6d6377c76887fe48bf 873 Gene3D G3DSA:3.30.565.10 441 600 1.4E-47 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_20510 d972b1a3595aec6d6377c76887fe48bf 873 Gene3D G3DSA:3.30.450.20 223 363 3.7E-36 T 14-10-2018 DA442_20510 d972b1a3595aec6d6377c76887fe48bf 873 SUPERFAMILY SSF47384 360 440 1.08E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DA442_20510 d972b1a3595aec6d6377c76887fe48bf 873 Pfam PF13426 PAS domain 250 353 5.9E-21 T 14-10-2018 IPR000014 PAS domain DA442_20510 d972b1a3595aec6d6377c76887fe48bf 873 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 486 596 1.8E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_20510 d972b1a3595aec6d6377c76887fe48bf 873 SUPERFAMILY SSF55874 428 595 4.58E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_20510 d972b1a3595aec6d6377c76887fe48bf 873 SMART SM00086 312 354 3.1E-9 T 14-10-2018 IPR001610 PAC motif DA442_20510 d972b1a3595aec6d6377c76887fe48bf 873 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 240 361 3.1E-18 T 14-10-2018 IPR000014 PAS domain DA442_20510 d972b1a3595aec6d6377c76887fe48bf 873 Pfam PF00072 Response regulator receiver domain 744 857 6.1E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_20510 d972b1a3595aec6d6377c76887fe48bf 873 Pfam PF00512 His Kinase A (phospho-acceptor) domain 374 439 3.7E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_20510 d972b1a3595aec6d6377c76887fe48bf 873 SMART SM00387 486 597 9.8E-33 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_20510 d972b1a3595aec6d6377c76887fe48bf 873 SMART SM00091 239 305 2.8E-8 T 14-10-2018 IPR000014 PAS domain DA442_20510 d972b1a3595aec6d6377c76887fe48bf 873 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 536 7.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_20510 d972b1a3595aec6d6377c76887fe48bf 873 PRINTS PR00344 Bacterial sensor protein C-terminal signature 581 594 7.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_20510 d972b1a3595aec6d6377c76887fe48bf 873 PRINTS PR00344 Bacterial sensor protein C-terminal signature 557 575 7.1E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_20510 d972b1a3595aec6d6377c76887fe48bf 873 SMART SM00388 374 439 5.0E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_20510 d972b1a3595aec6d6377c76887fe48bf 873 SMART SM00304 170 222 1.9E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_20510 d972b1a3595aec6d6377c76887fe48bf 873 Gene3D G3DSA:1.10.287.130 364 440 6.7E-22 T 14-10-2018 DA442_20510 d972b1a3595aec6d6377c76887fe48bf 873 Gene3D G3DSA:3.40.50.2300 728 867 2.3E-37 T 14-10-2018 DA442_20510 d972b1a3595aec6d6377c76887fe48bf 873 SUPERFAMILY SSF52172 739 866 6.4E-36 T 14-10-2018 IPR011006 CheY-like superfamily DA442_20510 d972b1a3595aec6d6377c76887fe48bf 873 SUPERFAMILY SSF55785 246 354 1.11E-26 T 14-10-2018 IPR035965 PAS domain superfamily DA442_10690 65c2a45e20ca0bdb903fecb412b2d1c6 463 Gene3D G3DSA:1.10.10.10 1 68 3.8E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_10690 65c2a45e20ca0bdb903fecb412b2d1c6 463 SMART SM00345 7 66 5.3E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_10690 65c2a45e20ca0bdb903fecb412b2d1c6 463 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 2.8E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_10690 65c2a45e20ca0bdb903fecb412b2d1c6 463 Gene3D G3DSA:3.90.1150.10 95 461 1.8E-101 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DA442_10690 65c2a45e20ca0bdb903fecb412b2d1c6 463 Pfam PF00155 Aminotransferase class I and II 143 458 5.2E-37 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DA442_10690 65c2a45e20ca0bdb903fecb412b2d1c6 463 Gene3D G3DSA:3.40.640.10 138 357 1.8E-101 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_10690 65c2a45e20ca0bdb903fecb412b2d1c6 463 SUPERFAMILY SSF53383 91 462 5.05E-98 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_10690 65c2a45e20ca0bdb903fecb412b2d1c6 463 SUPERFAMILY SSF46785 1 68 9.16E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_14055 af12c88544af50914917513de3b6c00d 296 Gene3D G3DSA:3.30.420.40 4 114 2.4E-67 T 14-10-2018 DA442_14055 af12c88544af50914917513de3b6c00d 296 SUPERFAMILY SSF53067 1 111 4.92E-25 T 14-10-2018 DA442_14055 af12c88544af50914917513de3b6c00d 296 Gene3D G3DSA:3.30.420.40 115 261 2.4E-67 T 14-10-2018 DA442_14055 af12c88544af50914917513de3b6c00d 296 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 6 283 7.0E-45 T 14-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 DA442_14055 af12c88544af50914917513de3b6c00d 296 SUPERFAMILY SSF53067 114 283 3.33E-43 T 14-10-2018 DA442_23450 0899141f7309993c8932a07cf27b2833 196 Gene3D G3DSA:1.10.357.10 49 194 1.1E-21 T 14-10-2018 DA442_23450 0899141f7309993c8932a07cf27b2833 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 5.5E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DA442_23450 0899141f7309993c8932a07cf27b2833 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 5.5E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DA442_23450 0899141f7309993c8932a07cf27b2833 196 SUPERFAMILY SSF48498 81 193 2.79E-19 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DA442_23450 0899141f7309993c8932a07cf27b2833 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 53 2.4E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DA442_23450 0899141f7309993c8932a07cf27b2833 196 SUPERFAMILY SSF46689 3 71 6.31E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_23450 0899141f7309993c8932a07cf27b2833 196 Gene3D G3DSA:1.10.10.60 1 47 2.0E-20 T 14-10-2018 DA442_25285 1d656e6c0957c8b7a0c032ac829bd547 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 478 486 2.5E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DA442_25285 1d656e6c0957c8b7a0c032ac829bd547 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 388 407 2.5E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DA442_25285 1d656e6c0957c8b7a0c032ac829bd547 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 309 319 2.5E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DA442_25285 1d656e6c0957c8b7a0c032ac829bd547 605 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 328 335 2.5E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DA442_25285 1d656e6c0957c8b7a0c032ac829bd547 605 SUPERFAMILY SSF141673 6 133 1.18E-29 T 14-10-2018 DA442_25285 1d656e6c0957c8b7a0c032ac829bd547 605 SUPERFAMILY SSF63380 276 380 1.4E-25 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DA442_25285 1d656e6c0957c8b7a0c032ac829bd547 605 Pfam PF00175 Oxidoreductase NAD-binding domain 389 492 5.0E-18 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 DA442_25285 1d656e6c0957c8b7a0c032ac829bd547 605 SUPERFAMILY SSF50800 5 264 1.94E-13 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily DA442_25285 1d656e6c0957c8b7a0c032ac829bd547 605 Pfam PF03473 MOSC domain 138 262 1.5E-29 T 14-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 DA442_25285 1d656e6c0957c8b7a0c032ac829bd547 605 Gene3D G3DSA:3.40.50.80 381 507 5.7E-32 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DA442_25285 1d656e6c0957c8b7a0c032ac829bd547 605 PRINTS PR00406 Cytochrome B5 reductase signature 425 436 4.5E-8 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 DA442_25285 1d656e6c0957c8b7a0c032ac829bd547 605 PRINTS PR00406 Cytochrome B5 reductase signature 478 486 4.5E-8 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 DA442_25285 1d656e6c0957c8b7a0c032ac829bd547 605 PRINTS PR00406 Cytochrome B5 reductase signature 328 335 4.5E-8 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 DA442_25285 1d656e6c0957c8b7a0c032ac829bd547 605 PRINTS PR00406 Cytochrome B5 reductase signature 388 407 4.5E-8 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 DA442_25285 1d656e6c0957c8b7a0c032ac829bd547 605 PRINTS PR00406 Cytochrome B5 reductase signature 365 379 4.5E-8 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 DA442_25285 1d656e6c0957c8b7a0c032ac829bd547 605 Pfam PF03476 MOSC N-terminal beta barrel domain 5 118 6.7E-30 T 14-10-2018 IPR005303 MOSC, N-terminal beta barrel KEGG: 00790+2.8.1.9|MetaCyc: PWY-5963 DA442_25285 1d656e6c0957c8b7a0c032ac829bd547 605 SUPERFAMILY SSF54292 501 604 3.41E-26 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DA442_25285 1d656e6c0957c8b7a0c032ac829bd547 605 Gene3D G3DSA:3.10.20.30 508 605 2.7E-21 T 14-10-2018 IPR012675 Beta-grasp domain superfamily DA442_25285 1d656e6c0957c8b7a0c032ac829bd547 605 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 555 563 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 DA442_25285 1d656e6c0957c8b7a0c032ac829bd547 605 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 531 597 3.0E-11 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DA442_25285 1d656e6c0957c8b7a0c032ac829bd547 605 Gene3D G3DSA:2.40.30.10 279 378 1.2E-24 T 14-10-2018 DA442_25285 1d656e6c0957c8b7a0c032ac829bd547 605 SUPERFAMILY SSF52343 368 508 2.62E-36 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DA442_25285 1d656e6c0957c8b7a0c032ac829bd547 605 Pfam PF00970 Oxidoreductase FAD-binding domain 284 378 6.3E-15 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 DA442_16225 e1a226f357b9c8849e27543acc987537 302 Gene3D G3DSA:3.30.70.1350 207 290 1.4E-31 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 DA442_16225 e1a226f357b9c8849e27543acc987537 302 Pfam PF01545 Cation efflux family 15 206 1.5E-42 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 DA442_16225 e1a226f357b9c8849e27543acc987537 302 SUPERFAMILY SSF161111 8 207 7.19E-50 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily DA442_16225 e1a226f357b9c8849e27543acc987537 302 Gene3D G3DSA:1.20.1510.10 8 206 2.6E-60 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily DA442_16225 e1a226f357b9c8849e27543acc987537 302 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 286 5.1E-26 T 14-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain DA442_16225 e1a226f357b9c8849e27543acc987537 302 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 11 286 3.4E-68 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 DA442_16225 e1a226f357b9c8849e27543acc987537 302 SUPERFAMILY SSF160240 210 287 3.66E-24 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 DA442_10715 5b98da9aaabd8a4965c8b1f5fd46bc1b 396 SUPERFAMILY SSF53383 1 395 6.59E-113 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_10715 5b98da9aaabd8a4965c8b1f5fd46bc1b 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 1.6E-38 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 DA442_10715 5b98da9aaabd8a4965c8b1f5fd46bc1b 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 1.6E-38 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 DA442_10715 5b98da9aaabd8a4965c8b1f5fd46bc1b 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 1.6E-38 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 DA442_10715 5b98da9aaabd8a4965c8b1f5fd46bc1b 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 1.6E-38 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 DA442_10715 5b98da9aaabd8a4965c8b1f5fd46bc1b 396 Gene3D G3DSA:3.40.640.10 60 300 1.3E-160 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_10715 5b98da9aaabd8a4965c8b1f5fd46bc1b 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 DA442_10715 5b98da9aaabd8a4965c8b1f5fd46bc1b 396 Gene3D G3DSA:3.90.1150.10 5 392 1.3E-160 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DA442_10715 5b98da9aaabd8a4965c8b1f5fd46bc1b 396 Pfam PF00155 Aminotransferase class I and II 27 391 5.9E-83 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DA442_20610 8ade5d38c4523e593163b4cbe1f04c90 273 Pfam PF00005 ABC transporter 31 179 3.5E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_20610 8ade5d38c4523e593163b4cbe1f04c90 273 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_20610 8ade5d38c4523e593163b4cbe1f04c90 273 SUPERFAMILY SSF52540 13 251 9.76E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_20610 8ade5d38c4523e593163b4cbe1f04c90 273 SMART SM00382 40 231 1.9E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_20610 8ade5d38c4523e593163b4cbe1f04c90 273 Gene3D G3DSA:3.40.50.300 10 253 5.8E-57 T 14-10-2018 DA442_12870 bdb176c69927a274fccd147078caaa7d 231 SUPERFAMILY SSF118196 1 226 7.59E-79 T 14-10-2018 IPR036413 YaeB-like superfamily DA442_12870 bdb176c69927a274fccd147078caaa7d 231 Gene3D G3DSA:2.40.30.70 1 139 1.1E-42 T 14-10-2018 IPR036414 YaeB, N-terminal domain superfamily DA442_12870 bdb176c69927a274fccd147078caaa7d 231 Pfam PF01980 Uncharacterised protein family UPF0066 19 141 3.3E-39 T 14-10-2018 IPR023370 YaeB-like, N-terminal domain DA442_12870 bdb176c69927a274fccd147078caaa7d 231 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 2 146 5.7E-48 T 14-10-2018 IPR023370 YaeB-like, N-terminal domain DA442_12870 bdb176c69927a274fccd147078caaa7d 231 Gene3D G3DSA:3.30.2310.10 140 227 1.2E-19 T 14-10-2018 DA442_12870 bdb176c69927a274fccd147078caaa7d 231 ProSitePatterns PS01318 TsaA-like domain signature. 85 96 - T 14-10-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site DA442_20470 8fdca92ce68a3404e31d157b1f92b81f 497 Gene3D G3DSA:3.40.309.10 250 450 2.9E-142 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DA442_20470 8fdca92ce68a3404e31d157b1f92b81f 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DA442_20470 8fdca92ce68a3404e31d157b1f92b81f 497 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 5 481 3.0E-242 T 14-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 DA442_20470 8fdca92ce68a3404e31d157b1f92b81f 497 Pfam PF00171 Aldehyde dehydrogenase family 17 477 1.8E-138 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DA442_20470 8fdca92ce68a3404e31d157b1f92b81f 497 SUPERFAMILY SSF53720 2 483 2.23E-144 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DA442_20470 8fdca92ce68a3404e31d157b1f92b81f 497 Gene3D G3DSA:3.40.605.10 24 458 2.9E-142 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DA442_15135 7d59f26153b5a2694bdcecc571de25f5 267 Pfam PF00005 ABC transporter 23 170 3.0E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_15135 7d59f26153b5a2694bdcecc571de25f5 267 SUPERFAMILY SSF52540 6 239 4.96E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_15135 7d59f26153b5a2694bdcecc571de25f5 267 Gene3D G3DSA:3.40.50.300 4 253 2.1E-67 T 14-10-2018 DA442_15135 7d59f26153b5a2694bdcecc571de25f5 267 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_15135 7d59f26153b5a2694bdcecc571de25f5 267 SMART SM00382 31 228 4.9E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_23415 341418c0f0281bb3f453f4302166a91a 455 Gene3D G3DSA:3.30.310.20 200 312 4.0E-24 T 14-10-2018 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily DA442_23415 341418c0f0281bb3f453f4302166a91a 455 Pfam PF06029 AlkA N-terminal domain 201 312 2.5E-32 T 14-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal DA442_23415 341418c0f0281bb3f453f4302166a91a 455 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 143 185 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DA442_23415 341418c0f0281bb3f453f4302166a91a 455 SUPERFAMILY SSF55945 201 293 2.98E-25 T 14-10-2018 DA442_23415 341418c0f0281bb3f453f4302166a91a 455 SUPERFAMILY SSF57884 7 91 1.57E-34 T 14-10-2018 IPR035451 Ada-like domain superfamily DA442_23415 341418c0f0281bb3f453f4302166a91a 455 SUPERFAMILY SSF46689 92 139 6.16E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_23415 341418c0f0281bb3f453f4302166a91a 455 Gene3D G3DSA:1.10.1670.10 415 455 6.0E-6 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 DA442_23415 341418c0f0281bb3f453f4302166a91a 455 Pfam PF12833 Helix-turn-helix domain 112 191 5.8E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_23415 341418c0f0281bb3f453f4302166a91a 455 Pfam PF02805 Metal binding domain of Ada 14 77 8.6E-30 T 14-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 DA442_23415 341418c0f0281bb3f453f4302166a91a 455 Gene3D G3DSA:1.10.340.30 313 413 7.0E-18 T 14-10-2018 DA442_23415 341418c0f0281bb3f453f4302166a91a 455 SMART SM00342 106 189 4.9E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_23415 341418c0f0281bb3f453f4302166a91a 455 Gene3D G3DSA:3.40.10.10 4 79 1.9E-29 T 14-10-2018 IPR035451 Ada-like domain superfamily DA442_23415 341418c0f0281bb3f453f4302166a91a 455 Gene3D G3DSA:1.10.10.60 86 194 3.1E-25 T 14-10-2018 DA442_23415 341418c0f0281bb3f453f4302166a91a 455 SUPERFAMILY SSF48150 303 452 5.06E-30 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 DA442_23415 341418c0f0281bb3f453f4302166a91a 455 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 318 437 3.3E-5 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DA442_23415 341418c0f0281bb3f453f4302166a91a 455 SMART SM01009 200 312 2.3E-32 T 14-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal DA442_23415 341418c0f0281bb3f453f4302166a91a 455 SUPERFAMILY SSF46689 144 192 5.21E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_12690 2b11ab47a26f662613e9d2f96e215a31 252 PIRSF PIRSF005457 1 252 7.4E-99 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 DA442_12690 2b11ab47a26f662613e9d2f96e215a31 252 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 252 1.7E-103 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 DA442_12690 2b11ab47a26f662613e9d2f96e215a31 252 SUPERFAMILY SSF56281 2 252 9.96E-70 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DA442_12690 2b11ab47a26f662613e9d2f96e215a31 252 Pfam PF00753 Metallo-beta-lactamase superfamily 14 166 2.5E-20 T 14-10-2018 IPR001279 Metallo-beta-lactamase DA442_12690 2b11ab47a26f662613e9d2f96e215a31 252 SMART SM00849 12 166 2.2E-33 T 14-10-2018 IPR001279 Metallo-beta-lactamase DA442_12690 2b11ab47a26f662613e9d2f96e215a31 252 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 167 252 2.4E-26 T 14-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 DA442_12690 2b11ab47a26f662613e9d2f96e215a31 252 Gene3D G3DSA:3.60.15.10 1 252 7.0E-92 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DA442_12690 2b11ab47a26f662613e9d2f96e215a31 252 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 252 45.466 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 DA442_02065 80a11d733affecd85d69b5b6bb4a437e 167 Pfam PF05638 Type VI secretion system effector, Hcp 7 143 8.2E-25 T 14-10-2018 IPR008514 Type VI secretion system effector, Hcp DA442_02065 80a11d733affecd85d69b5b6bb4a437e 167 SUPERFAMILY SSF141452 4 154 5.36E-31 T 14-10-2018 IPR036624 Hcp1-like superfamily DA442_02065 80a11d733affecd85d69b5b6bb4a437e 167 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 155 1.5E-48 T 14-10-2018 IPR008514 Type VI secretion system effector, Hcp DA442_02065 80a11d733affecd85d69b5b6bb4a437e 167 Gene3D G3DSA:2.30.110.20 2 160 4.8E-49 T 14-10-2018 IPR036624 Hcp1-like superfamily DA442_19510 02e820c85bf2bf0151a35b6370c770d0 251 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 31 248 1.1E-62 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 DA442_19510 02e820c85bf2bf0151a35b6370c770d0 251 Gene3D G3DSA:3.40.190.10 28 249 7.2E-80 T 14-10-2018 DA442_19510 02e820c85bf2bf0151a35b6370c770d0 251 SUPERFAMILY SSF53850 25 249 4.25E-64 T 14-10-2018 DA442_19510 02e820c85bf2bf0151a35b6370c770d0 251 Gene3D G3DSA:3.40.190.10 104 215 7.2E-80 T 14-10-2018 DA442_19510 02e820c85bf2bf0151a35b6370c770d0 251 Pfam PF13531 Bacterial extracellular solute-binding protein 26 250 4.7E-49 T 14-10-2018 DA442_19510 02e820c85bf2bf0151a35b6370c770d0 251 PIRSF PIRSF004846 2 251 1.5E-70 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 DA442_17920 f6bb6c42197d56e3900dc4631bb96eaa 533 SMART SM00267 94 260 1.2E-37 T 14-10-2018 IPR000160 GGDEF domain DA442_17920 f6bb6c42197d56e3900dc4631bb96eaa 533 Pfam PF00990 Diguanylate cyclase, GGDEF domain 105 255 5.5E-36 T 14-10-2018 IPR000160 GGDEF domain DA442_17920 f6bb6c42197d56e3900dc4631bb96eaa 533 SMART SM00052 270 515 2.8E-80 T 14-10-2018 IPR001633 EAL domain DA442_17920 f6bb6c42197d56e3900dc4631bb96eaa 533 Gene3D G3DSA:3.20.20.450 273 532 6.5E-82 T 14-10-2018 IPR035919 EAL domain superfamily DA442_17920 f6bb6c42197d56e3900dc4631bb96eaa 533 Gene3D G3DSA:3.30.70.270 100 272 2.2E-44 T 14-10-2018 DA442_17920 f6bb6c42197d56e3900dc4631bb96eaa 533 SUPERFAMILY SSF141868 276 523 1.57E-76 T 14-10-2018 IPR035919 EAL domain superfamily DA442_17920 f6bb6c42197d56e3900dc4631bb96eaa 533 Pfam PF00563 EAL domain 277 509 1.3E-63 T 14-10-2018 IPR001633 EAL domain DA442_17920 f6bb6c42197d56e3900dc4631bb96eaa 533 SUPERFAMILY SSF55073 110 255 1.49E-38 T 14-10-2018 IPR029787 Nucleotide cyclase DA442_17920 f6bb6c42197d56e3900dc4631bb96eaa 533 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 103 255 8.4E-34 T 14-10-2018 IPR000160 GGDEF domain DA442_13710 76dec1e91993ae9717c583df43182f2d 691 Pfam PF13337 Putative ATP-dependent Lon protease 27 481 2.0E-209 T 14-10-2018 IPR014061 Conserved hypothetical protein CHP02688 DA442_13710 76dec1e91993ae9717c583df43182f2d 691 SUPERFAMILY SSF54211 510 690 1.97E-24 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DA442_13710 76dec1e91993ae9717c583df43182f2d 691 SUPERFAMILY SSF52540 231 449 8.1E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_13710 76dec1e91993ae9717c583df43182f2d 691 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 240 259 7.1E-5 T 14-10-2018 DA442_13710 76dec1e91993ae9717c583df43182f2d 691 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 643 661 7.1E-5 T 14-10-2018 DA442_13710 76dec1e91993ae9717c583df43182f2d 691 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 620 639 7.1E-5 T 14-10-2018 DA442_13710 76dec1e91993ae9717c583df43182f2d 691 Gene3D G3DSA:3.30.230.10 510 690 3.1E-23 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DA442_13710 76dec1e91993ae9717c583df43182f2d 691 TIGRFAM TIGR02653 Lon_rel_chp: conserved hypothetical protein 18 691 0.0 T 14-10-2018 IPR013473 Conserved hypothetical protein CHP02653, peptidase S16 non-peptidase homologue DA442_13710 76dec1e91993ae9717c583df43182f2d 691 TIGRFAM TIGR02688 TIGR02688: TIGR02688 family protein 25 472 2.4E-186 T 14-10-2018 IPR014061 Conserved hypothetical protein CHP02688 DA442_13710 76dec1e91993ae9717c583df43182f2d 691 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 529 687 1.3E-14 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 DA442_07880 ed1bd401a7c96cfeaab555b0678877f6 374 Pfam PF13692 Glycosyl transferases group 1 216 345 3.1E-7 T 14-10-2018 DA442_07880 ed1bd401a7c96cfeaab555b0678877f6 374 SUPERFAMILY SSF53756 81 372 6.28E-22 T 14-10-2018 DA442_07880 ed1bd401a7c96cfeaab555b0678877f6 374 Gene3D G3DSA:3.40.50.2000 203 351 6.1E-29 T 14-10-2018 DA442_25535 b9e465edd7b7224fcc38e8b977280ceb 1046 Gene3D G3DSA:3.30.70.1440 668 865 0.0 T 14-10-2018 DA442_25535 b9e465edd7b7224fcc38e8b977280ceb 1046 Gene3D G3DSA:1.20.1640.10 9 511 0.0 T 14-10-2018 DA442_25535 b9e465edd7b7224fcc38e8b977280ceb 1046 Gene3D G3DSA:3.30.70.1430 39 816 0.0 T 14-10-2018 DA442_25535 b9e465edd7b7224fcc38e8b977280ceb 1046 SUPERFAMILY SSF82714 184 274 3.79E-24 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DA442_25535 b9e465edd7b7224fcc38e8b977280ceb 1046 Gene3D G3DSA:3.30.2090.10 180 277 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DA442_25535 b9e465edd7b7224fcc38e8b977280ceb 1046 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1041 0.0 T 14-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 DA442_25535 b9e465edd7b7224fcc38e8b977280ceb 1046 SUPERFAMILY SSF82866 830 1026 1.44E-45 T 14-10-2018 DA442_25535 b9e465edd7b7224fcc38e8b977280ceb 1046 SUPERFAMILY SSF82693 39 132 4.19E-23 T 14-10-2018 DA442_25535 b9e465edd7b7224fcc38e8b977280ceb 1046 Gene3D G3DSA:1.20.1640.10 512 1023 0.0 T 14-10-2018 DA442_25535 b9e465edd7b7224fcc38e8b977280ceb 1046 SUPERFAMILY SSF82714 721 805 2.88E-21 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DA442_25535 b9e465edd7b7224fcc38e8b977280ceb 1046 SUPERFAMILY SSF82693 671 856 7.85E-25 T 14-10-2018 DA442_25535 b9e465edd7b7224fcc38e8b977280ceb 1046 Pfam PF00873 AcrB/AcrD/AcrF family 3 1026 0.0 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_25535 b9e465edd7b7224fcc38e8b977280ceb 1046 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 2.4E-88 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_25535 b9e465edd7b7224fcc38e8b977280ceb 1046 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 2.4E-88 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_25535 b9e465edd7b7224fcc38e8b977280ceb 1046 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 2.4E-88 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_25535 b9e465edd7b7224fcc38e8b977280ceb 1046 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 2.4E-88 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_25535 b9e465edd7b7224fcc38e8b977280ceb 1046 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 2.4E-88 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_25535 b9e465edd7b7224fcc38e8b977280ceb 1046 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 2.4E-88 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_25535 b9e465edd7b7224fcc38e8b977280ceb 1046 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 2.4E-88 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_25535 b9e465edd7b7224fcc38e8b977280ceb 1046 PRINTS PR00702 Acriflavin resistance protein family signature 620 634 2.4E-88 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_25535 b9e465edd7b7224fcc38e8b977280ceb 1046 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 2.4E-88 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_25535 b9e465edd7b7224fcc38e8b977280ceb 1046 Gene3D G3DSA:3.30.2090.10 720 808 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DA442_25535 b9e465edd7b7224fcc38e8b977280ceb 1046 SUPERFAMILY SSF82866 299 499 2.62E-53 T 14-10-2018 DA442_25535 b9e465edd7b7224fcc38e8b977280ceb 1046 Gene3D G3DSA:3.30.70.1320 134 334 0.0 T 14-10-2018 DA442_25535 b9e465edd7b7224fcc38e8b977280ceb 1046 SUPERFAMILY SSF82693 564 670 3.92E-24 T 14-10-2018 DA442_25535 b9e465edd7b7224fcc38e8b977280ceb 1046 SUPERFAMILY SSF82693 137 332 1.44E-22 T 14-10-2018 DA442_25535 b9e465edd7b7224fcc38e8b977280ceb 1046 Gene3D G3DSA:3.30.70.1430 566 667 0.0 T 14-10-2018 DA442_07820 47000bffa753e37433bc8a696014d64e 165 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 47 58 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DA442_07820 47000bffa753e37433bc8a696014d64e 165 Gene3D G3DSA:3.30.70.20 37 101 1.4E-12 T 14-10-2018 DA442_07820 47000bffa753e37433bc8a696014d64e 165 Gene3D G3DSA:3.30.70.20 105 160 1.5E-10 T 14-10-2018 DA442_07820 47000bffa753e37433bc8a696014d64e 165 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 78 89 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DA442_07820 47000bffa753e37433bc8a696014d64e 165 Pfam PF12838 4Fe-4S dicluster domain 117 156 5.0E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DA442_07820 47000bffa753e37433bc8a696014d64e 165 Pfam PF12838 4Fe-4S dicluster domain 47 90 9.6E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DA442_07820 47000bffa753e37433bc8a696014d64e 165 SUPERFAMILY SSF54862 41 162 4.55E-21 T 14-10-2018 DA442_24310 da3ac3ba3acebc24d2d4b0ce0fa408ce 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 66 195 1.4E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DA442_24310 da3ac3ba3acebc24d2d4b0ce0fa408ce 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 96 189 1.9E-15 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DA442_24310 da3ac3ba3acebc24d2d4b0ce0fa408ce 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 194 2.0E-23 T 14-10-2018 DA442_24310 da3ac3ba3acebc24d2d4b0ce0fa408ce 224 Gene3D G3DSA:1.10.150.240 16 95 2.2E-64 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DA442_24310 da3ac3ba3acebc24d2d4b0ce0fa408ce 224 SUPERFAMILY SSF56784 2 222 2.18E-49 T 14-10-2018 IPR036412 HAD-like superfamily DA442_24310 da3ac3ba3acebc24d2d4b0ce0fa408ce 224 Gene3D G3DSA:3.40.50.1000 5 218 2.2E-64 T 14-10-2018 IPR023214 HAD superfamily DA442_24310 da3ac3ba3acebc24d2d4b0ce0fa408ce 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 184 197 6.3E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DA442_24310 da3ac3ba3acebc24d2d4b0ce0fa408ce 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 6.3E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DA442_24310 da3ac3ba3acebc24d2d4b0ce0fa408ce 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 6.3E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DA442_24310 da3ac3ba3acebc24d2d4b0ce0fa408ce 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 6.3E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DA442_24310 da3ac3ba3acebc24d2d4b0ce0fa408ce 224 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 3 222 1.4E-87 T 14-10-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 DA442_17285 390fda417f38b144d32aa06dfa5b58d3 305 PIRSF PIRSF000166 2 305 5.2E-128 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DA442_17285 390fda417f38b144d32aa06dfa5b58d3 305 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 281 55.818 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DA442_17285 390fda417f38b144d32aa06dfa5b58d3 305 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 170 194 - T 14-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DA442_17285 390fda417f38b144d32aa06dfa5b58d3 305 Pfam PF01218 Coproporphyrinogen III oxidase 9 305 3.1E-131 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DA442_17285 390fda417f38b144d32aa06dfa5b58d3 305 PRINTS PR00073 Coprogen oxidase signature 129 151 8.4E-70 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DA442_17285 390fda417f38b144d32aa06dfa5b58d3 305 PRINTS PR00073 Coprogen oxidase signature 238 265 8.4E-70 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DA442_17285 390fda417f38b144d32aa06dfa5b58d3 305 PRINTS PR00073 Coprogen oxidase signature 266 292 8.4E-70 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DA442_17285 390fda417f38b144d32aa06dfa5b58d3 305 PRINTS PR00073 Coprogen oxidase signature 94 118 8.4E-70 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DA442_17285 390fda417f38b144d32aa06dfa5b58d3 305 PRINTS PR00073 Coprogen oxidase signature 31 47 8.4E-70 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DA442_17285 390fda417f38b144d32aa06dfa5b58d3 305 PRINTS PR00073 Coprogen oxidase signature 166 195 8.4E-70 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DA442_17285 390fda417f38b144d32aa06dfa5b58d3 305 Gene3D G3DSA:3.40.1500.10 1 305 1.4E-136 T 14-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DA442_17285 390fda417f38b144d32aa06dfa5b58d3 305 SUPERFAMILY SSF102886 6 305 4.58E-137 T 14-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DA442_13425 4201885ad33a7f787262fc7777330fe1 257 Gene3D G3DSA:3.20.20.140 1 256 6.5E-83 T 14-10-2018 DA442_13425 4201885ad33a7f787262fc7777330fe1 257 PIRSF PIRSF005902 1 257 9.2E-66 T 14-10-2018 IPR001130 TatD family GO:0016788 DA442_13425 4201885ad33a7f787262fc7777330fe1 257 SUPERFAMILY SSF51556 1 255 4.32E-77 T 14-10-2018 IPR032466 Metal-dependent hydrolase DA442_13425 4201885ad33a7f787262fc7777330fe1 257 Pfam PF01026 TatD related DNase 4 253 3.4E-66 T 14-10-2018 IPR001130 TatD family GO:0016788 DA442_13425 4201885ad33a7f787262fc7777330fe1 257 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 DA442_13425 4201885ad33a7f787262fc7777330fe1 257 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 DA442_13375 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 SMART SM00889 478 596 9.9E-59 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 DA442_13375 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Hamap MF_00054_B Elongation factor G [fusA]. 3 689 102.045 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DA442_13375 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Pfam PF03764 Elongation factor G, domain IV 477 595 2.5E-41 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 DA442_13375 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 SUPERFAMILY SSF54980 402 479 5.4E-21 T 14-10-2018 IPR035647 EF-G domain III/V-like DA442_13375 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Pfam PF14492 Elongation Factor G, domain II 402 475 2.3E-29 T 14-10-2018 DA442_13375 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Pfam PF00679 Elongation factor G C-terminus 598 684 1.7E-29 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like DA442_13375 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 174 9.9E-24 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DA442_13375 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 SUPERFAMILY SSF54980 601 690 1.76E-29 T 14-10-2018 IPR035647 EF-G domain III/V-like DA442_13375 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 PRINTS PR00315 GTP-binding elongation factor signature 9 22 1.1E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_13375 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.1E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_13375 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.1E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_13375 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.1E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_13375 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Gene3D G3DSA:2.40.30.10 292 414 1.5E-44 T 14-10-2018 DA442_13375 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 690 1.7E-288 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DA442_13375 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 SUPERFAMILY SSF50447 262 400 2.05E-32 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DA442_13375 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Gene3D G3DSA:3.30.70.870 431 481 5.8E-21 T 14-10-2018 DA442_13375 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 SMART SM00838 598 685 3.7E-47 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like DA442_13375 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Pfam PF00009 Elongation factor Tu GTP binding domain 6 279 1.1E-59 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_13375 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Gene3D G3DSA:3.40.50.300 1 290 1.2E-99 T 14-10-2018 DA442_13375 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 SUPERFAMILY SSF52540 3 279 4.29E-98 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_13375 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Gene3D G3DSA:3.30.230.10 482 685 6.2E-82 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DA442_13375 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Gene3D G3DSA:3.30.70.240 602 672 6.2E-82 T 14-10-2018 DA442_13375 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site DA442_13375 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 Pfam PF03144 Elongation factor Tu domain 2 322 389 3.1E-17 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DA442_13375 5e3fc9d3ba2b7034c0864ccf7e3957fc 696 SUPERFAMILY SSF54211 477 596 2.38E-38 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DA442_05725 dee7ef9d61056a05729de49988fdccde 350 SUPERFAMILY SSF102114 5 310 2.49E-89 T 14-10-2018 DA442_05725 dee7ef9d61056a05729de49988fdccde 350 Pfam PF04055 Radical SAM superfamily 50 199 3.2E-15 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DA442_05725 dee7ef9d61056a05729de49988fdccde 350 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 2.5E-20 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 DA442_05725 dee7ef9d61056a05729de49988fdccde 350 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.664 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 DA442_05725 dee7ef9d61056a05729de49988fdccde 350 TIGRFAM TIGR00433 bioB: biotin synthase 16 310 7.7E-125 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 DA442_05725 dee7ef9d61056a05729de49988fdccde 350 SMART SM00876 220 312 6.0E-46 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 DA442_05725 dee7ef9d61056a05729de49988fdccde 350 SMART SM00729 43 255 2.1E-40 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DA442_05725 dee7ef9d61056a05729de49988fdccde 350 PIRSF PIRSF001619 1 319 1.7E-137 T 14-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 DA442_05725 dee7ef9d61056a05729de49988fdccde 350 Gene3D G3DSA:3.20.20.70 4 315 1.2E-131 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_18605 51c2be9febbf5a243396858d9925bd8b 324 SUPERFAMILY SSF52172 193 320 7.12E-29 T 14-10-2018 IPR011006 CheY-like superfamily DA442_18605 51c2be9febbf5a243396858d9925bd8b 324 Gene3D G3DSA:2.30.30.40 36 154 4.2E-30 T 14-10-2018 DA442_18605 51c2be9febbf5a243396858d9925bd8b 324 SMART SM00448 193 318 6.1E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_18605 51c2be9febbf5a243396858d9925bd8b 324 Pfam PF00072 Response regulator receiver domain 195 316 7.2E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_18605 51c2be9febbf5a243396858d9925bd8b 324 Gene3D G3DSA:3.40.50.2300 180 322 1.8E-29 T 14-10-2018 DA442_18605 51c2be9febbf5a243396858d9925bd8b 324 SUPERFAMILY SSF50341 7 165 1.57E-33 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 DA442_18605 51c2be9febbf5a243396858d9925bd8b 324 Gene3D G3DSA:2.40.50.180 44 160 4.2E-30 T 14-10-2018 DA442_18605 51c2be9febbf5a243396858d9925bd8b 324 PIRSF PIRSF002867 1 324 1.0E-102 T 14-10-2018 IPR024181 Chemotaxis response regulator CheV DA442_18605 51c2be9febbf5a243396858d9925bd8b 324 SMART SM00260 14 160 7.6E-26 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DA442_18605 51c2be9febbf5a243396858d9925bd8b 324 Pfam PF01584 CheW-like domain 35 162 1.9E-30 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DA442_06810 e4413c912583b2a5b8869524feb816be 224 SUPERFAMILY SSF46785 9 76 1.76E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_06810 e4413c912583b2a5b8869524feb816be 224 Gene3D G3DSA:1.20.120.530 78 222 1.6E-27 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DA442_06810 e4413c912583b2a5b8869524feb816be 224 SUPERFAMILY SSF48008 78 214 3.66E-26 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DA442_06810 e4413c912583b2a5b8869524feb816be 224 Gene3D G3DSA:1.10.10.10 1 73 2.3E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_06810 e4413c912583b2a5b8869524feb816be 224 SMART SM00895 82 207 2.9E-20 T 14-10-2018 IPR011711 GntR, C-terminal DA442_06810 e4413c912583b2a5b8869524feb816be 224 Pfam PF07729 FCD domain 82 206 1.9E-25 T 14-10-2018 IPR011711 GntR, C-terminal DA442_06810 e4413c912583b2a5b8869524feb816be 224 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 72 1.5E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_06810 e4413c912583b2a5b8869524feb816be 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 3.7E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_06810 e4413c912583b2a5b8869524feb816be 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 3.7E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_06810 e4413c912583b2a5b8869524feb816be 224 SMART SM00345 14 72 1.5E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_18815 702c8868b7589e53151b116a8c8328b5 312 Gene3D G3DSA:2.40.230.10 46 311 5.3E-87 T 14-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 DA442_18815 702c8868b7589e53151b116a8c8328b5 312 SUPERFAMILY SSF56931 48 311 1.83E-91 T 14-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 DA442_18815 702c8868b7589e53151b116a8c8328b5 312 Pfam PF02253 Phospholipase A1 48 308 2.5E-96 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 DA442_18815 702c8868b7589e53151b116a8c8328b5 312 PRINTS PR01486 Bacterial phospholipase A1 protein signature 140 159 5.2E-28 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 DA442_18815 702c8868b7589e53151b116a8c8328b5 312 PRINTS PR01486 Bacterial phospholipase A1 protein signature 259 276 5.2E-28 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 DA442_18815 702c8868b7589e53151b116a8c8328b5 312 PRINTS PR01486 Bacterial phospholipase A1 protein signature 226 244 5.2E-28 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 DA442_18815 702c8868b7589e53151b116a8c8328b5 312 PRINTS PR01486 Bacterial phospholipase A1 protein signature 281 301 5.2E-28 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 DA442_18815 702c8868b7589e53151b116a8c8328b5 312 PRINTS PR01486 Bacterial phospholipase A1 protein signature 94 111 5.2E-28 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 DA442_08890 e408a3aa4172f34f3031b805b774ab8e 148 Gene3D G3DSA:3.30.1460.10 1 131 6.6E-30 T 14-10-2018 DA442_08890 e408a3aa4172f34f3031b805b774ab8e 148 SUPERFAMILY SSF69635 4 136 9.03E-26 T 14-10-2018 DA442_08890 e408a3aa4172f34f3031b805b774ab8e 148 Pfam PF05932 Tir chaperone protein (CesT) family 10 124 1.3E-13 T 14-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 DA442_02635 4f82e29c9f5340441911e9efb49f6ba3 444 Gene3D G3DSA:1.10.8.60 310 386 7.2E-23 T 14-10-2018 DA442_02635 4f82e29c9f5340441911e9efb49f6ba3 444 SMART SM00382 166 306 0.0029 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_02635 4f82e29c9f5340441911e9efb49f6ba3 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 402 419 2.7E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DA442_02635 4f82e29c9f5340441911e9efb49f6ba3 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 419 439 2.7E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DA442_02635 4f82e29c9f5340441911e9efb49f6ba3 444 SUPERFAMILY SSF52540 146 380 4.54E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_02635 4f82e29c9f5340441911e9efb49f6ba3 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site DA442_02635 4f82e29c9f5340441911e9efb49f6ba3 444 Gene3D G3DSA:3.40.50.300 145 309 1.6E-39 T 14-10-2018 DA442_02635 4f82e29c9f5340441911e9efb49f6ba3 444 Pfam PF00158 Sigma-54 interaction domain 146 305 2.4E-37 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DA442_02635 4f82e29c9f5340441911e9efb49f6ba3 444 Pfam PF02954 Bacterial regulatory protein, Fis family 396 435 3.7E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DA442_02635 4f82e29c9f5340441911e9efb49f6ba3 444 SUPERFAMILY SSF46689 352 438 5.38E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_02635 4f82e29c9f5340441911e9efb49f6ba3 444 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 170 183 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DA442_02635 4f82e29c9f5340441911e9efb49f6ba3 444 Gene3D G3DSA:1.10.10.60 387 440 1.0E-12 T 14-10-2018 DA442_02635 4f82e29c9f5340441911e9efb49f6ba3 444 SUPERFAMILY SSF52172 27 190 1.39E-7 T 14-10-2018 IPR011006 CheY-like superfamily DA442_23610 b513cbc71dfcabb084e7d7cce09d20e4 225 SUPERFAMILY SSF56935 43 147 5.23E-7 T 14-10-2018 DA442_23610 b513cbc71dfcabb084e7d7cce09d20e4 225 Gene3D G3DSA:2.40.160.40 22 225 5.6E-42 T 14-10-2018 DA442_23610 b513cbc71dfcabb084e7d7cce09d20e4 225 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 17 225 1.6E-26 T 14-10-2018 IPR009331 Oligogalacturonate-specific porin DA442_19480 afb711a0147a2cf598cee89027ec9773 414 Pfam PF00990 Diguanylate cyclase, GGDEF domain 362 407 4.1E-6 T 14-10-2018 IPR000160 GGDEF domain DA442_19480 afb711a0147a2cf598cee89027ec9773 414 Pfam PF00990 Diguanylate cyclase, GGDEF domain 238 343 7.0E-24 T 14-10-2018 IPR000160 GGDEF domain DA442_19480 afb711a0147a2cf598cee89027ec9773 414 SUPERFAMILY SSF55073 243 411 1.33E-34 T 14-10-2018 IPR029787 Nucleotide cyclase DA442_19480 afb711a0147a2cf598cee89027ec9773 414 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 236 344 6.2E-25 T 14-10-2018 IPR000160 GGDEF domain DA442_19480 afb711a0147a2cf598cee89027ec9773 414 Gene3D G3DSA:3.30.70.270 230 413 4.3E-46 T 14-10-2018 DA442_19480 afb711a0147a2cf598cee89027ec9773 414 SMART SM00267 227 412 8.6E-36 T 14-10-2018 IPR000160 GGDEF domain DA442_18920 af7400b8fc24f9f9f5f4cedfbe850620 1019 SUPERFAMILY SSF82866 292 491 1.29E-37 T 14-10-2018 DA442_18920 af7400b8fc24f9f9f5f4cedfbe850620 1019 SUPERFAMILY SSF82714 712 788 3.92E-10 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DA442_18920 af7400b8fc24f9f9f5f4cedfbe850620 1019 Gene3D G3DSA:3.30.70.1430 40 804 1.8E-265 T 14-10-2018 DA442_18920 af7400b8fc24f9f9f5f4cedfbe850620 1019 SUPERFAMILY SSF82866 794 1015 3.53E-44 T 14-10-2018 DA442_18920 af7400b8fc24f9f9f5f4cedfbe850620 1019 Gene3D G3DSA:3.30.70.1320 135 328 1.8E-265 T 14-10-2018 DA442_18920 af7400b8fc24f9f9f5f4cedfbe850620 1019 Gene3D G3DSA:1.20.1640.10 10 508 1.8E-265 T 14-10-2018 DA442_18920 af7400b8fc24f9f9f5f4cedfbe850620 1019 Gene3D G3DSA:3.30.2090.10 179 270 1.8E-265 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DA442_18920 af7400b8fc24f9f9f5f4cedfbe850620 1019 Gene3D G3DSA:3.30.2090.10 706 796 1.8E-265 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DA442_18920 af7400b8fc24f9f9f5f4cedfbe850620 1019 SUPERFAMILY SSF82693 136 325 4.24E-21 T 14-10-2018 DA442_18920 af7400b8fc24f9f9f5f4cedfbe850620 1019 SUPERFAMILY SSF82693 41 135 3.84E-20 T 14-10-2018 DA442_18920 af7400b8fc24f9f9f5f4cedfbe850620 1019 Gene3D G3DSA:3.30.70.1430 556 654 1.8E-265 T 14-10-2018 DA442_18920 af7400b8fc24f9f9f5f4cedfbe850620 1019 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 6.3E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_18920 af7400b8fc24f9f9f5f4cedfbe850620 1019 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 6.3E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_18920 af7400b8fc24f9f9f5f4cedfbe850620 1019 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 6.3E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_18920 af7400b8fc24f9f9f5f4cedfbe850620 1019 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 6.3E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_18920 af7400b8fc24f9f9f5f4cedfbe850620 1019 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 6.3E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_18920 af7400b8fc24f9f9f5f4cedfbe850620 1019 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 6.3E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_18920 af7400b8fc24f9f9f5f4cedfbe850620 1019 SUPERFAMILY SSF82714 185 266 2.88E-12 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DA442_18920 af7400b8fc24f9f9f5f4cedfbe850620 1019 Pfam PF00873 AcrB/AcrD/AcrF family 3 1011 8.5E-177 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_18920 af7400b8fc24f9f9f5f4cedfbe850620 1019 Gene3D G3DSA:3.30.70.1440 655 856 1.8E-265 T 14-10-2018 DA442_18920 af7400b8fc24f9f9f5f4cedfbe850620 1019 Gene3D G3DSA:1.20.1640.10 509 1008 1.8E-265 T 14-10-2018 DA442_14010 52fe9bb9774135b79ecb312010b44711 341 Pfam PF08468 Methyltransferase small domain N-terminal 8 163 2.2E-57 T 14-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 DA442_14010 52fe9bb9774135b79ecb312010b44711 341 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 340 46.607 T 14-10-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 DA442_14010 52fe9bb9774135b79ecb312010b44711 341 Pfam PF05175 Methyltransferase small domain 172 336 2.4E-61 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 DA442_14010 52fe9bb9774135b79ecb312010b44711 341 Gene3D G3DSA:3.40.50.150 158 341 1.2E-41 T 14-10-2018 DA442_14010 52fe9bb9774135b79ecb312010b44711 341 Gene3D G3DSA:3.40.50.150 1 157 8.4E-50 T 14-10-2018 DA442_14010 52fe9bb9774135b79ecb312010b44711 341 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 269 275 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DA442_14010 52fe9bb9774135b79ecb312010b44711 341 SUPERFAMILY SSF53335 152 332 6.64E-27 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_02135 1ba68085299053f985a15894fd62f2b2 406 Pfam PF01743 Poly A polymerase head domain 3 122 2.0E-19 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 DA442_02135 1ba68085299053f985a15894fd62f2b2 406 SUPERFAMILY SSF81891 120 400 1.31E-54 T 14-10-2018 DA442_02135 1ba68085299053f985a15894fd62f2b2 406 SUPERFAMILY SSF81301 2 119 1.42E-30 T 14-10-2018 DA442_02135 1ba68085299053f985a15894fd62f2b2 406 Gene3D G3DSA:3.30.460.10 1 121 2.5E-29 T 14-10-2018 DA442_02135 1ba68085299053f985a15894fd62f2b2 406 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 1.1E-13 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 DA442_02135 1ba68085299053f985a15894fd62f2b2 406 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 406 52.247 T 14-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 DA442_02135 1ba68085299053f985a15894fd62f2b2 406 Gene3D G3DSA:1.10.3090.10 122 404 5.1E-44 T 14-10-2018 DA442_02135 1ba68085299053f985a15894fd62f2b2 406 PIRSF PIRSF000813 1 406 1.1E-205 T 14-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 DA442_02135 1ba68085299053f985a15894fd62f2b2 406 Pfam PF01966 HD domain 229 314 2.2E-8 T 14-10-2018 IPR006674 HD domain DA442_02135 1ba68085299053f985a15894fd62f2b2 406 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 42.08 T 14-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 DA442_20420 265205832ee7f9e106deacfdb2a4afcf 576 SUPERFAMILY SSF54373 302 484 7.55E-61 T 14-10-2018 DA442_20420 265205832ee7f9e106deacfdb2a4afcf 576 Gene3D G3DSA:1.10.1220.110 97 150 3.2E-173 T 14-10-2018 DA442_20420 265205832ee7f9e106deacfdb2a4afcf 576 Gene3D G3DSA:4.10.450.10 38 198 3.2E-173 T 14-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 DA442_20420 265205832ee7f9e106deacfdb2a4afcf 576 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 3 563 59.634 T 14-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 DA442_20420 265205832ee7f9e106deacfdb2a4afcf 576 Gene3D G3DSA:3.30.410.40 151 481 3.2E-173 T 14-10-2018 DA442_20420 265205832ee7f9e106deacfdb2a4afcf 576 Pfam PF00732 GMC oxidoreductase 5 307 7.4E-86 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 DA442_20420 265205832ee7f9e106deacfdb2a4afcf 576 SUPERFAMILY SSF51905 1 544 2.96E-82 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_20420 265205832ee7f9e106deacfdb2a4afcf 576 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 82 105 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 DA442_20420 265205832ee7f9e106deacfdb2a4afcf 576 Pfam PF05199 GMC oxidoreductase 398 536 1.5E-40 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 DA442_20420 265205832ee7f9e106deacfdb2a4afcf 576 TIGRFAM TIGR01810 betA: choline dehydrogenase 6 543 6.1E-232 T 14-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 DA442_20420 265205832ee7f9e106deacfdb2a4afcf 576 Gene3D G3DSA:3.50.50.60 4 540 3.2E-173 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_20420 265205832ee7f9e106deacfdb2a4afcf 576 PIRSF PIRSF000137 1 551 1.3E-146 T 14-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 DA442_11770 347b86c9406ad7891b8bb8bf1a633693 198 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 186 1.6E-87 T 14-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 DA442_11770 347b86c9406ad7891b8bb8bf1a633693 198 Pfam PF14697 4Fe-4S dicluster domain 107 161 5.9E-18 T 14-10-2018 DA442_11770 347b86c9406ad7891b8bb8bf1a633693 198 Gene3D G3DSA:1.10.15.40 38 81 8.0E-8 T 14-10-2018 DA442_11770 347b86c9406ad7891b8bb8bf1a633693 198 Pfam PF04060 Putative Fe-S cluster 44 75 1.9E-14 T 14-10-2018 IPR007202 4Fe-4S domain GO:0051536 DA442_11770 347b86c9406ad7891b8bb8bf1a633693 198 Gene3D G3DSA:3.30.70.20 82 181 1.8E-22 T 14-10-2018 DA442_11770 347b86c9406ad7891b8bb8bf1a633693 198 SUPERFAMILY SSF54862 37 173 9.43E-31 T 14-10-2018 DA442_11770 347b86c9406ad7891b8bb8bf1a633693 198 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 4 166 26.039 T 14-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 DA442_11770 347b86c9406ad7891b8bb8bf1a633693 198 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 144 155 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DA442_11770 347b86c9406ad7891b8bb8bf1a633693 198 PIRSF PIRSF005784 3 188 5.0E-87 T 14-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 DA442_23185 aee065258d765648a23f394e6ce0f6a4 324 SUPERFAMILY SSF110849 73 150 4.71E-9 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily DA442_23185 aee065258d765648a23f394e6ce0f6a4 324 SMART SM00470 53 149 5.2E-8 T 14-10-2018 IPR003115 ParB/Sulfiredoxin DA442_23185 aee065258d765648a23f394e6ce0f6a4 324 Pfam PF02195 ParB-like nuclease domain 70 145 2.6E-8 T 14-10-2018 IPR003115 ParB/Sulfiredoxin DA442_23185 aee065258d765648a23f394e6ce0f6a4 324 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 67 227 3.8E-22 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 DA442_23185 aee065258d765648a23f394e6ce0f6a4 324 Gene3D G3DSA:1.10.10.2830 153 276 6.5E-16 T 14-10-2018 DA442_20965 5f631f1505373cdebfd28ba643a27570 149 SUPERFAMILY SSF54909 63 149 2.28E-21 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel DA442_20965 5f631f1505373cdebfd28ba643a27570 149 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 47 1.6E-18 T 14-10-2018 DA442_20965 5f631f1505373cdebfd28ba643a27570 149 Pfam PF01037 Lrp/AsnC ligand binding domain 67 140 4.5E-21 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DA442_20965 5f631f1505373cdebfd28ba643a27570 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 1.2E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DA442_20965 5f631f1505373cdebfd28ba643a27570 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 1.2E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DA442_20965 5f631f1505373cdebfd28ba643a27570 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 1.2E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DA442_20965 5f631f1505373cdebfd28ba643a27570 149 Gene3D G3DSA:1.10.10.10 2 51 6.8E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_20965 5f631f1505373cdebfd28ba643a27570 149 SMART SM00344 1 110 2.5E-45 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DA442_20965 5f631f1505373cdebfd28ba643a27570 149 SUPERFAMILY SSF46785 1 60 5.91E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_20965 5f631f1505373cdebfd28ba643a27570 149 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DA442_20965 5f631f1505373cdebfd28ba643a27570 149 Gene3D G3DSA:3.30.70.920 52 146 7.3E-23 T 14-10-2018 DA442_00275 ca1bab0c4cfabfbd82de55bbc2606b3d 334 Pfam PF05036 Sporulation related domain 73 142 1.7E-4 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 DA442_17460 76e96d1aad10f6565f3772d07ce24dd0 467 Gene3D G3DSA:1.10.1140.10 352 467 2.6E-53 T 14-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DA442_17460 76e96d1aad10f6565f3772d07ce24dd0 467 SMART SM00382 142 334 5.9E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_17460 76e96d1aad10f6565f3772d07ce24dd0 467 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 340 349 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DA442_17460 76e96d1aad10f6565f3772d07ce24dd0 467 SUPERFAMILY SSF50615 1 75 2.17E-25 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DA442_17460 76e96d1aad10f6565f3772d07ce24dd0 467 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 349 4.5E-60 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DA442_17460 76e96d1aad10f6565f3772d07ce24dd0 467 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 467 55.912 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 DA442_17460 76e96d1aad10f6565f3772d07ce24dd0 467 Gene3D G3DSA:3.40.50.300 76 351 1.4E-110 T 14-10-2018 DA442_17460 76e96d1aad10f6565f3772d07ce24dd0 467 SUPERFAMILY SSF47917 352 466 1.83E-50 T 14-10-2018 DA442_17460 76e96d1aad10f6565f3772d07ce24dd0 467 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 467 2.1E-248 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 DA442_17460 76e96d1aad10f6565f3772d07ce24dd0 467 Gene3D G3DSA:2.40.10.170 2 75 5.5E-30 T 14-10-2018 DA442_17460 76e96d1aad10f6565f3772d07ce24dd0 467 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 73 1.2E-20 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DA442_17460 76e96d1aad10f6565f3772d07ce24dd0 467 SUPERFAMILY SSF52540 77 355 5.8E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_24225 f9244f71578208adb36578fa45aa16eb 518 SUPERFAMILY SSF47413 12 84 6.19E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DA442_24225 f9244f71578208adb36578fa45aa16eb 518 SMART SM00530 17 79 9.8E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DA442_24225 f9244f71578208adb36578fa45aa16eb 518 Pfam PF12268 Protein of unknown function (DUF3612) 327 501 4.6E-106 T 14-10-2018 IPR022055 Protein of unknown function DUF3612 DA442_24225 f9244f71578208adb36578fa45aa16eb 518 Pfam PF06114 IrrE N-terminal-like domain 210 326 7.9E-5 T 14-10-2018 IPR010359 IrrE N-terminal-like domain DA442_24225 f9244f71578208adb36578fa45aa16eb 518 Gene3D G3DSA:1.10.260.40 11 93 7.9E-14 T 14-10-2018 DA442_24225 f9244f71578208adb36578fa45aa16eb 518 Pfam PF01381 Helix-turn-helix 18 79 1.7E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DA442_17405 754044c8634925a0521c1df0721eb8cf 548 Gene3D G3DSA:3.40.50.970 351 548 4.3E-66 T 14-10-2018 DA442_17405 754044c8634925a0521c1df0721eb8cf 548 Gene3D G3DSA:3.40.50.970 1 178 2.8E-66 T 14-10-2018 DA442_17405 754044c8634925a0521c1df0721eb8cf 548 SUPERFAMILY SSF52518 1 176 1.07E-61 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DA442_17405 754044c8634925a0521c1df0721eb8cf 548 Gene3D G3DSA:3.40.50.1220 180 350 9.5E-53 T 14-10-2018 DA442_17405 754044c8634925a0521c1df0721eb8cf 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 412 431 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 DA442_17405 754044c8634925a0521c1df0721eb8cf 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 546 3.8E-210 T 14-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 DA442_17405 754044c8634925a0521c1df0721eb8cf 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 167 3.7E-55 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 DA442_17405 754044c8634925a0521c1df0721eb8cf 548 SUPERFAMILY SSF52467 182 341 1.11E-55 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DA442_17405 754044c8634925a0521c1df0721eb8cf 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 375 523 2.8E-48 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 DA442_17405 754044c8634925a0521c1df0721eb8cf 548 SUPERFAMILY SSF52518 358 545 1.23E-65 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DA442_17405 754044c8634925a0521c1df0721eb8cf 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 187 322 2.3E-40 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 DA442_05285 4f945651500a5dd65a5a06c02be18ec5 741 SUPERFAMILY SSF53659 5 740 0.0 T 14-10-2018 DA442_05285 4f945651500a5dd65a5a06c02be18ec5 741 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 740 0.0 T 14-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 DA442_05285 4f945651500a5dd65a5a06c02be18ec5 741 Gene3D G3DSA:3.40.718.10 414 650 3.5E-8 T 14-10-2018 DA442_05285 4f945651500a5dd65a5a06c02be18ec5 741 PIRSF PIRSF009407 1 741 0.0 T 14-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 DA442_05285 4f945651500a5dd65a5a06c02be18ec5 741 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 740 0.0 T 14-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 DA442_24200 734317b9e9e4e2a61d7b307952229f19 402 Pfam PF07670 Nucleoside recognition 90 185 3.1E-8 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 DA442_24200 734317b9e9e4e2a61d7b307952229f19 402 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 399 2.3E-141 T 14-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 DA442_24200 734317b9e9e4e2a61d7b307952229f19 402 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 399 6.0E-73 T 14-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 DA442_24200 734317b9e9e4e2a61d7b307952229f19 402 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 5.4E-24 T 14-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 DA442_23085 c85d8963e77f552cce47dfc85316829d 616 SUPERFAMILY SSF47384 361 443 8.24E-8 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DA442_23085 c85d8963e77f552cce47dfc85316829d 616 SMART SM00388 376 444 0.0043 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_23085 c85d8963e77f552cce47dfc85316829d 616 Gene3D G3DSA:3.30.565.10 447 611 8.6E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_23085 c85d8963e77f552cce47dfc85316829d 616 Pfam PF02743 Cache domain 40 229 1.2E-15 T 14-10-2018 IPR033479 Double Cache domain 1 DA442_23085 c85d8963e77f552cce47dfc85316829d 616 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 491 601 9.3E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_23085 c85d8963e77f552cce47dfc85316829d 616 Gene3D G3DSA:3.30.450.20 47 275 2.3E-60 T 14-10-2018 DA442_23085 c85d8963e77f552cce47dfc85316829d 616 Gene3D G3DSA:3.30.450.20 59 177 2.3E-60 T 14-10-2018 DA442_23085 c85d8963e77f552cce47dfc85316829d 616 SMART SM00387 488 603 2.1E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_23085 c85d8963e77f552cce47dfc85316829d 616 SUPERFAMILY SSF103190 51 185 4.51E-18 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily DA442_23085 c85d8963e77f552cce47dfc85316829d 616 PIRSF PIRSF036431 3 610 7.4E-199 T 14-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) DA442_23085 c85d8963e77f552cce47dfc85316829d 616 SUPERFAMILY SSF55874 446 604 1.88E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_23085 c85d8963e77f552cce47dfc85316829d 616 Gene3D G3DSA:1.10.287.130 352 440 7.9E-16 T 14-10-2018 DA442_23085 c85d8963e77f552cce47dfc85316829d 616 PRINTS PR00344 Bacterial sensor protein C-terminal signature 528 542 4.2E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_23085 c85d8963e77f552cce47dfc85316829d 616 PRINTS PR00344 Bacterial sensor protein C-terminal signature 587 600 4.2E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_23085 c85d8963e77f552cce47dfc85316829d 616 PRINTS PR00344 Bacterial sensor protein C-terminal signature 546 556 4.2E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_23085 c85d8963e77f552cce47dfc85316829d 616 PRINTS PR00344 Bacterial sensor protein C-terminal signature 557 575 4.2E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_12360 8f53a4f75eccb81c0e9a8d16030b91f3 244 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 19 238 6.3E-87 T 14-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 DA442_12360 8f53a4f75eccb81c0e9a8d16030b91f3 244 Pfam PF04539 Sigma-70 region 3 100 161 6.9E-12 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 DA442_12360 8f53a4f75eccb81c0e9a8d16030b91f3 244 SUPERFAMILY SSF88946 6 91 3.79E-24 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DA442_12360 8f53a4f75eccb81c0e9a8d16030b91f3 244 PRINTS PR00046 Major sigma-70 factor signature 46 59 3.8E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DA442_12360 8f53a4f75eccb81c0e9a8d16030b91f3 244 PRINTS PR00046 Major sigma-70 factor signature 207 222 3.8E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DA442_12360 8f53a4f75eccb81c0e9a8d16030b91f3 244 PRINTS PR00046 Major sigma-70 factor signature 222 233 3.8E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DA442_12360 8f53a4f75eccb81c0e9a8d16030b91f3 244 PRINTS PR00046 Major sigma-70 factor signature 190 202 3.8E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DA442_12360 8f53a4f75eccb81c0e9a8d16030b91f3 244 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 237 1.3E-32 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DA442_12360 8f53a4f75eccb81c0e9a8d16030b91f3 244 PIRSF PIRSF000770 2 243 1.0E-39 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DA442_12360 8f53a4f75eccb81c0e9a8d16030b91f3 244 Gene3D G3DSA:1.20.140.160 90 239 7.6E-46 T 14-10-2018 DA442_12360 8f53a4f75eccb81c0e9a8d16030b91f3 244 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 7 240 62.854 T 14-10-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 DA442_12360 8f53a4f75eccb81c0e9a8d16030b91f3 244 Gene3D G3DSA:1.10.1740.10 5 88 2.1E-28 T 14-10-2018 DA442_12360 8f53a4f75eccb81c0e9a8d16030b91f3 244 SUPERFAMILY SSF88659 155 239 9.53E-21 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DA442_12360 8f53a4f75eccb81c0e9a8d16030b91f3 244 Pfam PF04542 Sigma-70 region 2 19 91 5.0E-16 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DA442_12360 8f53a4f75eccb81c0e9a8d16030b91f3 244 SUPERFAMILY SSF88659 92 164 5.23E-16 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DA442_12360 8f53a4f75eccb81c0e9a8d16030b91f3 244 Pfam PF04545 Sigma-70, region 4 187 234 2.7E-19 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 DA442_05045 867396251366f03a7121fe87122e28d1 386 Gene3D G3DSA:1.10.10.680 169 250 8.7E-78 T 14-10-2018 DA442_05045 867396251366f03a7121fe87122e28d1 386 Pfam PF09002 Domain of unknown function (DUF1887) 1 379 1.4E-163 T 14-10-2018 IPR015093 Protein of unknown function DUF1887 DA442_05045 867396251366f03a7121fe87122e28d1 386 SUPERFAMILY SSF52980 1 382 2.86E-120 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DA442_05045 867396251366f03a7121fe87122e28d1 386 Gene3D G3DSA:3.40.1350.10 251 376 8.7E-78 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 DA442_05045 867396251366f03a7121fe87122e28d1 386 Gene3D G3DSA:3.40.50.10770 1 140 2.3E-60 T 14-10-2018 DA442_22060 25e24eb37bb43ae7ad4b3b678aed08d6 479 Pfam PF03929 PepSY-associated TM region 24 416 3.2E-62 T 14-10-2018 IPR005625 PepSY-associated TM protein DA442_23640 0bcd3926bf7bd57a5c1fa3a5e67f9d24 146 Pfam PF01037 Lrp/AsnC ligand binding domain 67 141 2.2E-16 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DA442_23640 0bcd3926bf7bd57a5c1fa3a5e67f9d24 146 Gene3D G3DSA:3.30.70.920 54 137 3.0E-20 T 14-10-2018 DA442_23640 0bcd3926bf7bd57a5c1fa3a5e67f9d24 146 SUPERFAMILY SSF54909 63 145 1.74E-16 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel DA442_23640 0bcd3926bf7bd57a5c1fa3a5e67f9d24 146 SUPERFAMILY SSF46785 1 60 5.47E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_23640 0bcd3926bf7bd57a5c1fa3a5e67f9d24 146 SMART SM00344 1 110 3.1E-37 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DA442_23640 0bcd3926bf7bd57a5c1fa3a5e67f9d24 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 1.7E-17 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DA442_23640 0bcd3926bf7bd57a5c1fa3a5e67f9d24 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 1.7E-17 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DA442_23640 0bcd3926bf7bd57a5c1fa3a5e67f9d24 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 1.7E-17 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DA442_23640 0bcd3926bf7bd57a5c1fa3a5e67f9d24 146 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DA442_23640 0bcd3926bf7bd57a5c1fa3a5e67f9d24 146 Gene3D G3DSA:1.10.10.10 2 53 9.8E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_23640 0bcd3926bf7bd57a5c1fa3a5e67f9d24 146 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 1.1E-18 T 14-10-2018 DA442_04575 69bc732cb94a84ad80d16bb7c045ebbf 94 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 73 1.0E-36 T 14-10-2018 IPR027354 YcgL domain DA442_04575 69bc732cb94a84ad80d16bb7c045ebbf 94 Hamap MF_01866 Protein YcgL [ycgL]. 1 87 27.303 T 14-10-2018 IPR027354 YcgL domain DA442_04575 69bc732cb94a84ad80d16bb7c045ebbf 94 Pfam PF05166 YcgL domain 3 74 6.5E-32 T 14-10-2018 IPR027354 YcgL domain DA442_04575 69bc732cb94a84ad80d16bb7c045ebbf 94 Gene3D G3DSA:3.10.510.20 1 73 5.3E-30 T 14-10-2018 IPR038068 YcgL-like superfamily DA442_04575 69bc732cb94a84ad80d16bb7c045ebbf 94 SUPERFAMILY SSF160191 1 92 1.22E-37 T 14-10-2018 IPR038068 YcgL-like superfamily DA442_05975 b33fff7a0989a885f937b4367e9d769d 579 SUPERFAMILY SSF51445 194 530 3.19E-76 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DA442_05975 b33fff7a0989a885f937b4367e9d769d 579 Pfam PF02065 Melibiase 162 352 7.9E-18 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 DA442_05975 b33fff7a0989a885f937b4367e9d769d 579 Gene3D G3DSA:3.20.20.70 189 495 2.0E-92 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_01615 88de3662e4e8edb030aa2b55098fb80f 574 SUPERFAMILY SSF116726 290 349 5.1E-13 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DA442_01615 88de3662e4e8edb030aa2b55098fb80f 574 Gene3D G3DSA:3.30.70.1450 289 359 1.6E-11 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DA442_01615 88de3662e4e8edb030aa2b55098fb80f 574 Gene3D G3DSA:3.30.70.1450 206 279 3.5E-13 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DA442_01615 88de3662e4e8edb030aa2b55098fb80f 574 Pfam PF03600 Citrate transporter 29 518 1.6E-29 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 DA442_01615 88de3662e4e8edb030aa2b55098fb80f 574 Pfam PF02080 TrkA-C domain 293 349 2.1E-11 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DA442_01615 88de3662e4e8edb030aa2b55098fb80f 574 Pfam PF02080 TrkA-C domain 209 276 5.8E-12 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DA442_01615 88de3662e4e8edb030aa2b55098fb80f 574 SUPERFAMILY SSF116726 206 283 2.88E-16 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DA442_04315 0e9a3acdb748a8369aa93bf65bf8b576 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 3.3E-75 T 14-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 DA442_04315 0e9a3acdb748a8369aa93bf65bf8b576 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 9.0E-15 T 14-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 DA442_04315 0e9a3acdb748a8369aa93bf65bf8b576 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 52.623 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DA442_04315 0e9a3acdb748a8369aa93bf65bf8b576 214 Gene3D G3DSA:3.40.50.300 1 214 5.0E-78 T 14-10-2018 DA442_04315 0e9a3acdb748a8369aa93bf65bf8b576 214 PRINTS PR00094 Adenylate kinase signature 4 17 6.2E-36 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DA442_04315 0e9a3acdb748a8369aa93bf65bf8b576 214 PRINTS PR00094 Adenylate kinase signature 32 46 6.2E-36 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DA442_04315 0e9a3acdb748a8369aa93bf65bf8b576 214 PRINTS PR00094 Adenylate kinase signature 156 171 6.2E-36 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DA442_04315 0e9a3acdb748a8369aa93bf65bf8b576 214 PRINTS PR00094 Adenylate kinase signature 173 187 6.2E-36 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DA442_04315 0e9a3acdb748a8369aa93bf65bf8b576 214 PRINTS PR00094 Adenylate kinase signature 81 97 6.2E-36 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DA442_04315 0e9a3acdb748a8369aa93bf65bf8b576 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 14-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DA442_04315 0e9a3acdb748a8369aa93bf65bf8b576 214 Pfam PF00406 Adenylate kinase 5 185 8.5E-60 T 14-10-2018 DA442_04315 0e9a3acdb748a8369aa93bf65bf8b576 214 SUPERFAMILY SSF52540 1 192 1.81E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_03705 29f9ffc63867a72288d109d8c45c7a17 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 156 5.4E-78 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 DA442_03705 29f9ffc63867a72288d109d8c45c7a17 156 PIRSF PIRSF004505 1 155 8.4E-44 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 DA442_03705 29f9ffc63867a72288d109d8c45c7a17 156 Gene3D G3DSA:3.40.1280.10 1 156 7.7E-53 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DA442_03705 29f9ffc63867a72288d109d8c45c7a17 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 27.687 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 DA442_03705 29f9ffc63867a72288d109d8c45c7a17 156 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 9.6E-49 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 DA442_03705 29f9ffc63867a72288d109d8c45c7a17 156 SUPERFAMILY SSF75217 1 154 2.04E-50 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases DA442_00180 5fcb4c67bedb9561df3c72a334d352e1 1040 Pfam PF00873 AcrB/AcrD/AcrF family 4 1003 3.9E-277 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_00180 5fcb4c67bedb9561df3c72a334d352e1 1040 Gene3D G3DSA:3.30.2090.10 698 786 1.1E-287 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DA442_00180 5fcb4c67bedb9561df3c72a334d352e1 1040 SUPERFAMILY SSF82866 290 489 4.97E-47 T 14-10-2018 DA442_00180 5fcb4c67bedb9561df3c72a334d352e1 1040 Gene3D G3DSA:1.20.1640.10 10 500 1.1E-287 T 14-10-2018 DA442_00180 5fcb4c67bedb9561df3c72a334d352e1 1040 Gene3D G3DSA:3.30.70.1430 40 794 1.1E-287 T 14-10-2018 DA442_00180 5fcb4c67bedb9561df3c72a334d352e1 1040 Gene3D G3DSA:3.30.2090.10 178 268 1.1E-287 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DA442_00180 5fcb4c67bedb9561df3c72a334d352e1 1040 Gene3D G3DSA:3.30.70.1430 555 647 1.1E-287 T 14-10-2018 DA442_00180 5fcb4c67bedb9561df3c72a334d352e1 1040 SUPERFAMILY SSF82866 782 1008 7.85E-48 T 14-10-2018 DA442_00180 5fcb4c67bedb9561df3c72a334d352e1 1040 Gene3D G3DSA:1.20.1640.10 501 1001 1.1E-287 T 14-10-2018 DA442_00180 5fcb4c67bedb9561df3c72a334d352e1 1040 SUPERFAMILY SSF82693 136 323 7.72E-22 T 14-10-2018 DA442_00180 5fcb4c67bedb9561df3c72a334d352e1 1040 SUPERFAMILY SSF82693 41 130 2.79E-23 T 14-10-2018 DA442_00180 5fcb4c67bedb9561df3c72a334d352e1 1040 Gene3D G3DSA:3.30.70.1440 648 843 1.1E-287 T 14-10-2018 DA442_00180 5fcb4c67bedb9561df3c72a334d352e1 1040 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 4.1E-76 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_00180 5fcb4c67bedb9561df3c72a334d352e1 1040 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 4.1E-76 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_00180 5fcb4c67bedb9561df3c72a334d352e1 1040 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 4.1E-76 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_00180 5fcb4c67bedb9561df3c72a334d352e1 1040 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 4.1E-76 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_00180 5fcb4c67bedb9561df3c72a334d352e1 1040 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 4.1E-76 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_00180 5fcb4c67bedb9561df3c72a334d352e1 1040 PRINTS PR00702 Acriflavin resistance protein family signature 603 617 4.1E-76 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_00180 5fcb4c67bedb9561df3c72a334d352e1 1040 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 4.1E-76 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_00180 5fcb4c67bedb9561df3c72a334d352e1 1040 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 4.1E-76 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_00180 5fcb4c67bedb9561df3c72a334d352e1 1040 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 4.1E-76 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_00180 5fcb4c67bedb9561df3c72a334d352e1 1040 SUPERFAMILY SSF82693 553 650 1.99E-21 T 14-10-2018 DA442_00180 5fcb4c67bedb9561df3c72a334d352e1 1040 SUPERFAMILY SSF82714 701 783 1.31E-17 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DA442_00180 5fcb4c67bedb9561df3c72a334d352e1 1040 SUPERFAMILY SSF82714 182 263 1.31E-15 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DA442_00180 5fcb4c67bedb9561df3c72a334d352e1 1040 Gene3D G3DSA:3.30.70.1320 134 325 1.1E-287 T 14-10-2018 DA442_13215 3777591dec5624676faad9753d6e82ca 356 Gene3D G3DSA:3.20.20.80 20 313 5.5E-31 T 14-10-2018 DA442_13215 3777591dec5624676faad9753d6e82ca 356 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 45 292 1.2E-10 T 14-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 DA442_13215 3777591dec5624676faad9753d6e82ca 356 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 163 172 - T 14-10-2018 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 DA442_13215 3777591dec5624676faad9753d6e82ca 356 SUPERFAMILY SSF51445 7 313 2.37E-50 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DA442_14070 dec8e618e4f68d0790faf3eff6c00b0f 470 SUPERFAMILY SSF53738 2 187 2.16E-39 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DA442_14070 dec8e618e4f68d0790faf3eff6c00b0f 470 Gene3D G3DSA:3.40.120.10 263 368 1.8E-60 T 14-10-2018 DA442_14070 dec8e618e4f68d0790faf3eff6c00b0f 470 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 417 466 7.5E-10 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DA442_14070 dec8e618e4f68d0790faf3eff6c00b0f 470 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 162 262 2.3E-24 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DA442_14070 dec8e618e4f68d0790faf3eff6c00b0f 470 Gene3D G3DSA:3.40.120.10 171 365 1.8E-60 T 14-10-2018 DA442_14070 dec8e618e4f68d0790faf3eff6c00b0f 470 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 267 378 5.3E-26 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DA442_14070 dec8e618e4f68d0790faf3eff6c00b0f 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 2.1E-11 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DA442_14070 dec8e618e4f68d0790faf3eff6c00b0f 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 214 227 2.1E-11 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DA442_14070 dec8e618e4f68d0790faf3eff6c00b0f 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 242 257 2.1E-11 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DA442_14070 dec8e618e4f68d0790faf3eff6c00b0f 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 180 199 2.1E-11 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DA442_14070 dec8e618e4f68d0790faf3eff6c00b0f 470 SUPERFAMILY SSF53738 250 379 2.0E-30 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DA442_14070 dec8e618e4f68d0790faf3eff6c00b0f 470 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 2 137 1.2E-36 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DA442_14070 dec8e618e4f68d0790faf3eff6c00b0f 470 Gene3D G3DSA:3.30.310.50 369 469 6.9E-16 T 14-10-2018 DA442_14070 dec8e618e4f68d0790faf3eff6c00b0f 470 SUPERFAMILY SSF55957 374 466 4.45E-18 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DA442_14070 dec8e618e4f68d0790faf3eff6c00b0f 470 Gene3D G3DSA:3.40.120.10 1 170 4.6E-47 T 14-10-2018 DA442_11160 4e596a92f84e92e58d1acf1cad6ba390 414 Gene3D G3DSA:1.10.510.10 308 389 2.9E-10 T 14-10-2018 DA442_11160 4e596a92f84e92e58d1acf1cad6ba390 414 SMART SM00364 128 147 140.0 T 14-10-2018 DA442_11160 4e596a92f84e92e58d1acf1cad6ba390 414 SMART SM00364 37 56 90.0 T 14-10-2018 DA442_11160 4e596a92f84e92e58d1acf1cad6ba390 414 SMART SM00364 105 124 11.0 T 14-10-2018 DA442_11160 4e596a92f84e92e58d1acf1cad6ba390 414 SMART SM00364 60 79 8.3 T 14-10-2018 DA442_11160 4e596a92f84e92e58d1acf1cad6ba390 414 SUPERFAMILY SSF52058 11 202 3.3E-33 T 14-10-2018 DA442_11160 4e596a92f84e92e58d1acf1cad6ba390 414 SMART SM00220 205 406 5.5E-6 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 DA442_11160 4e596a92f84e92e58d1acf1cad6ba390 414 Pfam PF00069 Protein kinase domain 205 367 8.5E-17 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 DA442_11160 4e596a92f84e92e58d1acf1cad6ba390 414 Gene3D G3DSA:3.30.200.20 194 286 1.2E-9 T 14-10-2018 DA442_11160 4e596a92f84e92e58d1acf1cad6ba390 414 SMART SM00369 129 150 140.0 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype DA442_11160 4e596a92f84e92e58d1acf1cad6ba390 414 SMART SM00369 104 128 52.0 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype DA442_11160 4e596a92f84e92e58d1acf1cad6ba390 414 SMART SM00369 151 174 23.0 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype DA442_11160 4e596a92f84e92e58d1acf1cad6ba390 414 SMART SM00369 60 83 5.5 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype DA442_11160 4e596a92f84e92e58d1acf1cad6ba390 414 SMART SM00369 39 59 34.0 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype DA442_11160 4e596a92f84e92e58d1acf1cad6ba390 414 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 211 238 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 DA442_11160 4e596a92f84e92e58d1acf1cad6ba390 414 SUPERFAMILY SSF56112 197 369 2.73E-25 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily DA442_11160 4e596a92f84e92e58d1acf1cad6ba390 414 Pfam PF13855 Leucine rich repeat 39 94 9.9E-7 T 14-10-2018 IPR001611 Leucine-rich repeat GO:0005515 DA442_11160 4e596a92f84e92e58d1acf1cad6ba390 414 Pfam PF13855 Leucine rich repeat 106 164 2.1E-7 T 14-10-2018 IPR001611 Leucine-rich repeat GO:0005515 DA442_11160 4e596a92f84e92e58d1acf1cad6ba390 414 Gene3D G3DSA:3.80.10.10 103 193 1.9E-18 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily DA442_11160 4e596a92f84e92e58d1acf1cad6ba390 414 Gene3D G3DSA:3.80.10.10 4 102 4.7E-17 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily DA442_05845 7c99fce7c7715f62741fa9ee268883d4 298 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 155 176 - T 14-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 DA442_05845 7c99fce7c7715f62741fa9ee268883d4 298 SUPERFAMILY SSF54913 225 297 5.89E-21 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta DA442_05845 7c99fce7c7715f62741fa9ee268883d4 298 Gene3D G3DSA:3.40.190.10 102 191 4.4E-68 T 14-10-2018 DA442_05845 7c99fce7c7715f62741fa9ee268883d4 298 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 5 298 35.188 T 14-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 DA442_05845 7c99fce7c7715f62741fa9ee268883d4 298 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 6 196 6.3E-55 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 DA442_05845 7c99fce7c7715f62741fa9ee268883d4 298 SUPERFAMILY SSF53850 5 222 1.07E-66 T 14-10-2018 DA442_05845 7c99fce7c7715f62741fa9ee268883d4 298 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 203 297 2.9E-30 T 14-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 DA442_05845 7c99fce7c7715f62741fa9ee268883d4 298 Gene3D G3DSA:3.40.190.10 6 219 4.4E-68 T 14-10-2018 DA442_05845 7c99fce7c7715f62741fa9ee268883d4 298 Pfam PF08029 HisG, C-terminal domain 222 295 6.5E-24 T 14-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 DA442_05845 7c99fce7c7715f62741fa9ee268883d4 298 Pfam PF01634 ATP phosphoribosyltransferase 53 218 8.9E-44 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 DA442_05845 7c99fce7c7715f62741fa9ee268883d4 298 Gene3D G3DSA:3.30.70.120 225 298 4.5E-33 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DA442_06640 936458ad6b1d021333851a8406ab6d6d 98 Gene3D G3DSA:4.10.520.10 1 98 6.4E-38 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DA442_06640 936458ad6b1d021333851a8406ab6d6d 98 Pfam PF00216 Bacterial DNA-binding protein 3 91 2.0E-31 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DA442_06640 936458ad6b1d021333851a8406ab6d6d 98 SUPERFAMILY SSF47729 3 95 3.53E-32 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DA442_06640 936458ad6b1d021333851a8406ab6d6d 98 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 5.9E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DA442_06640 936458ad6b1d021333851a8406ab6d6d 98 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 5.9E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DA442_06640 936458ad6b1d021333851a8406ab6d6d 98 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 5.9E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DA442_06640 936458ad6b1d021333851a8406ab6d6d 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 94 1.2E-50 T 14-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 DA442_06640 936458ad6b1d021333851a8406ab6d6d 98 SMART SM00411 3 92 1.6E-40 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DA442_06640 936458ad6b1d021333851a8406ab6d6d 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 DA442_06640 936458ad6b1d021333851a8406ab6d6d 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 30.604 T 14-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 DA442_03375 832e082d160e0caa9b2cfb3da4107f69 185 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 17 38 1.9E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DA442_03375 832e082d160e0caa9b2cfb3da4107f69 185 Pfam PF12019 Type II transport protein GspH 55 162 3.0E-6 T 14-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 DA442_03375 832e082d160e0caa9b2cfb3da4107f69 185 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 17 37 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DA442_03375 832e082d160e0caa9b2cfb3da4107f69 185 SUPERFAMILY SSF54523 19 160 5.02E-14 T 14-10-2018 DA442_03375 832e082d160e0caa9b2cfb3da4107f69 185 PIRSF PIRSF024622 1 185 1.9E-90 T 14-10-2018 IPR016824 Tfp pilus assembly protein FimT DA442_03375 832e082d160e0caa9b2cfb3da4107f69 185 Pfam PF07963 Prokaryotic N-terminal methylation motif 17 38 2.1E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DA442_03375 832e082d160e0caa9b2cfb3da4107f69 185 Gene3D G3DSA:3.30.700.10 19 143 1.6E-8 T 14-10-2018 DA442_02535 73dedf25ad0000fb7ac0d1455c8ab581 819 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 606 2.7E-27 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 DA442_02535 73dedf25ad0000fb7ac0d1455c8ab581 819 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 2.2E-132 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DA442_02535 73dedf25ad0000fb7ac0d1455c8ab581 819 Pfam PF01842 ACT domain 324 379 1.5E-9 T 14-10-2018 IPR002912 ACT domain DA442_02535 73dedf25ad0000fb7ac0d1455c8ab581 819 SUPERFAMILY SSF55021 383 476 7.45E-22 T 14-10-2018 DA442_02535 73dedf25ad0000fb7ac0d1455c8ab581 819 Pfam PF00696 Amino acid kinase family 2 284 1.2E-51 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DA442_02535 73dedf25ad0000fb7ac0d1455c8ab581 819 Gene3D G3DSA:3.40.50.720 467 811 1.0E-120 T 14-10-2018 DA442_02535 73dedf25ad0000fb7ac0d1455c8ab581 819 Gene3D G3DSA:3.30.2130.10 302 463 6.2E-46 T 14-10-2018 DA442_02535 73dedf25ad0000fb7ac0d1455c8ab581 819 Pfam PF13840 ACT domain 394 456 2.7E-7 T 14-10-2018 IPR027795 CASTOR, ACT domain DA442_02535 73dedf25ad0000fb7ac0d1455c8ab581 819 Pfam PF00742 Homoserine dehydrogenase 614 810 7.3E-47 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 DA442_02535 73dedf25ad0000fb7ac0d1455c8ab581 819 Gene3D G3DSA:3.30.360.10 625 795 1.0E-120 T 14-10-2018 DA442_02535 73dedf25ad0000fb7ac0d1455c8ab581 819 SUPERFAMILY SSF55021 303 381 1.32E-22 T 14-10-2018 DA442_02535 73dedf25ad0000fb7ac0d1455c8ab581 819 Gene3D G3DSA:1.20.120.1320 41 142 1.1E-87 T 14-10-2018 DA442_02535 73dedf25ad0000fb7ac0d1455c8ab581 819 PIRSF PIRSF000727 1 817 0.0 T 14-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DA442_02535 73dedf25ad0000fb7ac0d1455c8ab581 819 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 DA442_02535 73dedf25ad0000fb7ac0d1455c8ab581 819 SUPERFAMILY SSF51735 465 636 3.94E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_02535 73dedf25ad0000fb7ac0d1455c8ab581 819 Gene3D G3DSA:3.40.1160.10 3 295 1.1E-87 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DA442_02535 73dedf25ad0000fb7ac0d1455c8ab581 819 SUPERFAMILY SSF55347 614 797 3.6E-51 T 14-10-2018 DA442_02535 73dedf25ad0000fb7ac0d1455c8ab581 819 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DA442_02535 73dedf25ad0000fb7ac0d1455c8ab581 819 SUPERFAMILY SSF53633 1 298 3.94E-77 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DA442_12675 73611874a22ed276c12643357325f7e2 240 Pfam PF00929 Exonuclease 13 180 5.7E-38 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DA442_12675 73611874a22ed276c12643357325f7e2 240 SMART SM00479 11 189 4.4E-53 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DA442_12675 73611874a22ed276c12643357325f7e2 240 Gene3D G3DSA:3.30.420.10 4 194 2.0E-58 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DA442_12675 73611874a22ed276c12643357325f7e2 240 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 10 226 5.1E-82 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_12675 73611874a22ed276c12643357325f7e2 240 SUPERFAMILY SSF53098 9 190 3.17E-54 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DA442_12675 73611874a22ed276c12643357325f7e2 240 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 11 239 1.4E-97 T 14-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_21605 add3741e52b78fcc582382a5864aa756 348 Pfam PF13493 Domain of unknown function (DUF4118) 15 118 1.0E-21 T 14-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain DA442_21605 add3741e52b78fcc582382a5864aa756 348 Gene3D G3DSA:3.30.565.10 197 347 2.5E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_21605 add3741e52b78fcc582382a5864aa756 348 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 238 342 5.0E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_21605 add3741e52b78fcc582382a5864aa756 348 SUPERFAMILY SSF55874 181 341 1.28E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_21605 add3741e52b78fcc582382a5864aa756 348 Gene3D G3DSA:1.10.287.130 113 194 4.8E-13 T 14-10-2018 DA442_21605 add3741e52b78fcc582382a5864aa756 348 SMART SM00388 123 191 7.0E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_21605 add3741e52b78fcc582382a5864aa756 348 Pfam PF00512 His Kinase A (phospho-acceptor) domain 130 191 9.2E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_21605 add3741e52b78fcc582382a5864aa756 348 SMART SM00387 233 343 4.2E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_21605 add3741e52b78fcc582382a5864aa756 348 Gene3D G3DSA:1.20.120.620 10 112 9.5E-17 T 14-10-2018 IPR038318 KdpD, transmembrane domain superfamily DA442_21605 add3741e52b78fcc582382a5864aa756 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 288 298 1.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_21605 add3741e52b78fcc582382a5864aa756 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 327 340 1.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_21605 add3741e52b78fcc582382a5864aa756 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 270 284 1.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_21605 add3741e52b78fcc582382a5864aa756 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 304 322 1.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_21605 add3741e52b78fcc582382a5864aa756 348 SUPERFAMILY SSF47384 112 192 7.06E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DA442_22935 4e9117a865166eea6ec6b0e9956c6762 263 SMART SM00345 21 80 5.3E-22 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_22935 4e9117a865166eea6ec6b0e9956c6762 263 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 80 4.5E-21 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_22935 4e9117a865166eea6ec6b0e9956c6762 263 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 54 70 3.9E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_22935 4e9117a865166eea6ec6b0e9956c6762 263 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 54 3.9E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_22935 4e9117a865166eea6ec6b0e9956c6762 263 Pfam PF07729 FCD domain 102 228 2.9E-21 T 14-10-2018 IPR011711 GntR, C-terminal DA442_22935 4e9117a865166eea6ec6b0e9956c6762 263 SMART SM00895 102 229 1.0E-20 T 14-10-2018 IPR011711 GntR, C-terminal DA442_22935 4e9117a865166eea6ec6b0e9956c6762 263 Gene3D G3DSA:1.20.120.530 101 240 2.4E-24 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DA442_22935 4e9117a865166eea6ec6b0e9956c6762 263 SUPERFAMILY SSF46785 14 107 7.79E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_22935 4e9117a865166eea6ec6b0e9956c6762 263 Gene3D G3DSA:1.10.10.10 12 83 2.9E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_22935 4e9117a865166eea6ec6b0e9956c6762 263 SUPERFAMILY SSF48008 100 237 4.18E-28 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DA442_19640 d8c137151ecb5931ac364cd8409d5b39 446 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 413 4.6E-138 T 14-10-2018 DA442_19640 d8c137151ecb5931ac364cd8409d5b39 446 Pfam PF07690 Major Facilitator Superfamily 36 396 5.2E-48 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DA442_19640 d8c137151ecb5931ac364cd8409d5b39 446 PIRSF PIRSF002808 7 443 8.4E-145 T 14-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 DA442_19640 d8c137151ecb5931ac364cd8409d5b39 446 Gene3D G3DSA:1.20.1250.20 19 223 3.1E-52 T 14-10-2018 DA442_19640 d8c137151ecb5931ac364cd8409d5b39 446 Gene3D G3DSA:1.20.1250.20 238 438 1.2E-43 T 14-10-2018 DA442_19640 d8c137151ecb5931ac364cd8409d5b39 446 SUPERFAMILY SSF103473 17 441 1.16E-79 T 14-10-2018 IPR036259 MFS transporter superfamily DA442_19640 d8c137151ecb5931ac364cd8409d5b39 446 ProSitePatterns PS00942 glpT family of transporters signature. 151 167 - T 14-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 DA442_07945 7a93e8d5a58a34374325525429dd6f2e 273 Gene3D G3DSA:3.30.1490.70 31 190 3.2E-56 T 14-10-2018 DA442_07945 7a93e8d5a58a34374325525429dd6f2e 273 Pfam PF01068 ATP dependent DNA ligase domain 45 198 7.9E-8 T 14-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 DA442_07945 7a93e8d5a58a34374325525429dd6f2e 273 SUPERFAMILY SSF56091 22 198 4.08E-42 T 14-10-2018 DA442_07945 7a93e8d5a58a34374325525429dd6f2e 273 Gene3D G3DSA:2.40.50.140 211 273 4.4E-6 T 14-10-2018 DA442_07945 7a93e8d5a58a34374325525429dd6f2e 273 ProSitePatterns PS00333 ATP-dependent DNA ligase signature 2. 175 198 - T 14-10-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 DA442_07945 7a93e8d5a58a34374325525429dd6f2e 273 SUPERFAMILY SSF50249 173 273 3.2E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_07945 7a93e8d5a58a34374325525429dd6f2e 273 Pfam PF14743 DNA ligase OB-like domain 212 273 7.3E-25 T 14-10-2018 IPR029319 DNA ligase, OB-like domain DA442_07945 7a93e8d5a58a34374325525429dd6f2e 273 Gene3D G3DSA:3.30.470.30 51 151 3.2E-56 T 14-10-2018 DA442_04000 faea831d5754b9be3d973d1250af1753 373 Gene3D G3DSA:2.40.160.10 44 373 7.2E-44 T 14-10-2018 IPR023614 Porin domain superfamily DA442_04000 faea831d5754b9be3d973d1250af1753 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 117 127 5.2E-5 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 DA442_04000 faea831d5754b9be3d973d1250af1753 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 365 373 5.2E-5 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 DA442_04000 faea831d5754b9be3d973d1250af1753 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 177 188 5.2E-5 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 DA442_04000 faea831d5754b9be3d973d1250af1753 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 278 290 5.2E-5 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 DA442_04000 faea831d5754b9be3d973d1250af1753 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 73 84 5.2E-5 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 DA442_04000 faea831d5754b9be3d973d1250af1753 373 Pfam PF13609 Gram-negative porin 10 342 2.8E-35 T 14-10-2018 DA442_04000 faea831d5754b9be3d973d1250af1753 373 SUPERFAMILY SSF56935 44 373 6.11E-41 T 14-10-2018 DA442_16590 01b3498404570ece5f10b2e26c0999d1 142 SUPERFAMILY SSF54747 3 73 1.06E-29 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily DA442_16590 01b3498404570ece5f10b2e26c0999d1 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 71 9.0E-15 T 14-10-2018 DA442_16590 01b3498404570ece5f10b2e26c0999d1 142 SMART SM00649 9 141 2.1E-81 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 DA442_16590 01b3498404570ece5f10b2e26c0999d1 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 2.4E-64 T 14-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_16590 01b3498404570ece5f10b2e26c0999d1 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 3.6E-29 T 14-10-2018 IPR020784 Ribosomal protein L11, N-terminal DA442_16590 01b3498404570ece5f10b2e26c0999d1 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 1.5E-23 T 14-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 DA442_16590 01b3498404570ece5f10b2e26c0999d1 142 Gene3D G3DSA:3.30.1550.10 2 72 2.4E-34 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily DA442_16590 01b3498404570ece5f10b2e26c0999d1 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 14-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_16590 01b3498404570ece5f10b2e26c0999d1 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.525 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 DA442_16590 01b3498404570ece5f10b2e26c0999d1 142 Gene3D G3DSA:1.10.10.250 73 141 1.1E-25 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily DA442_16590 01b3498404570ece5f10b2e26c0999d1 142 SUPERFAMILY SSF46906 68 141 2.88E-25 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily DA442_20160 851f8e384e49ef3883f82fd68ea1e9a4 317 Pfam PF00591 Glycosyl transferase family, a/b domain 97 252 7.5E-6 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DA442_20160 851f8e384e49ef3883f82fd68ea1e9a4 317 Gene3D G3DSA:1.20.970.10 3 71 9.3E-15 T 14-10-2018 DA442_20160 851f8e384e49ef3883f82fd68ea1e9a4 317 Gene3D G3DSA:3.40.1030.10 72 307 3.0E-42 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 DA442_20160 851f8e384e49ef3883f82fd68ea1e9a4 317 SUPERFAMILY SSF47648 10 72 1.01E-14 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 DA442_20160 851f8e384e49ef3883f82fd68ea1e9a4 317 Pfam PF02885 Glycosyl transferase family, helical bundle domain 18 68 1.0E-10 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 DA442_20160 851f8e384e49ef3883f82fd68ea1e9a4 317 SUPERFAMILY SSF52418 73 315 7.53E-43 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 DA442_21780 25383df8583440925a0948f97fc63a9d 448 SUPERFAMILY SSF52540 77 366 7.29E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_21780 25383df8583440925a0948f97fc63a9d 448 SMART SM00490 264 345 2.7E-30 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_21780 25383df8583440925a0948f97fc63a9d 448 SMART SM00487 24 227 1.8E-53 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DA442_21780 25383df8583440925a0948f97fc63a9d 448 Gene3D G3DSA:3.40.50.300 1 216 1.7E-74 T 14-10-2018 DA442_21780 25383df8583440925a0948f97fc63a9d 448 Gene3D G3DSA:3.40.50.300 218 432 2.6E-51 T 14-10-2018 DA442_21780 25383df8583440925a0948f97fc63a9d 448 Pfam PF00271 Helicase conserved C-terminal domain 239 345 1.0E-29 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_21780 25383df8583440925a0948f97fc63a9d 448 Pfam PF00270 DEAD/DEAH box helicase 29 200 3.0E-48 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DA442_21780 25383df8583440925a0948f97fc63a9d 448 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 156 164 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DA442_18375 e5960a5a2a4ccd4c0580671c6f557192 545 Pfam PF08774 VRR-NUC domain 430 535 1.2E-25 T 14-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 DA442_18375 e5960a5a2a4ccd4c0580671c6f557192 545 SMART SM00990 434 536 7.8E-23 T 14-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 DA442_18375 e5960a5a2a4ccd4c0580671c6f557192 545 Gene3D G3DSA:3.40.1350.10 463 541 5.9E-10 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 DA442_15625 e2041def985ba5aeb05f62e1361f8e34 192 Pfam PF05137 Fimbrial assembly protein (PilN) 103 177 9.0E-11 T 14-10-2018 IPR007813 Fimbrial assembly PilN DA442_01160 8aefd7f91414b6b052eba2c57f41f316 352 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 70 326 1.0E-70 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 DA442_01160 8aefd7f91414b6b052eba2c57f41f316 352 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 3 345 4.5E-149 T 14-10-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 DA442_01160 8aefd7f91414b6b052eba2c57f41f316 352 Gene3D G3DSA:3.40.50.2000 165 347 1.1E-60 T 14-10-2018 DA442_01160 8aefd7f91414b6b052eba2c57f41f316 352 SUPERFAMILY SSF53756 2 344 1.05E-96 T 14-10-2018 DA442_01160 8aefd7f91414b6b052eba2c57f41f316 352 Gene3D G3DSA:3.40.50.2000 2 150 1.3E-52 T 14-10-2018 DA442_14540 3dcbaf5bf07851aa97cfb74f891db788 243 Hamap MF_00201 DNA repair protein RecO [recO]. 6 235 22.918 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 DA442_14540 3dcbaf5bf07851aa97cfb74f891db788 243 Gene3D G3DSA:1.20.1440.120 84 242 6.4E-53 T 14-10-2018 DA442_14540 3dcbaf5bf07851aa97cfb74f891db788 243 Pfam PF11967 Recombination protein O N terminal 11 81 2.5E-24 T 14-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal DA442_14540 3dcbaf5bf07851aa97cfb74f891db788 243 TIGRFAM TIGR00613 reco: DNA repair protein RecO 11 234 4.8E-41 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 DA442_14540 3dcbaf5bf07851aa97cfb74f891db788 243 SUPERFAMILY SSF57863 91 169 6.28E-12 T 14-10-2018 IPR037278 ARFGAP/RecO-like zinc finger DA442_14540 3dcbaf5bf07851aa97cfb74f891db788 243 SUPERFAMILY SSF50249 10 80 5.82E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_14540 3dcbaf5bf07851aa97cfb74f891db788 243 Gene3D G3DSA:2.40.50.140 6 83 4.1E-34 T 14-10-2018 DA442_14540 3dcbaf5bf07851aa97cfb74f891db788 243 Pfam PF02565 Recombination protein O C terminal 90 230 6.7E-24 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 DA442_21795 82eff504a0f66a79e93b545c1cdc57a9 471 Gene3D G3DSA:1.25.40.80 133 286 3.3E-78 T 14-10-2018 DA442_21795 82eff504a0f66a79e93b545c1cdc57a9 471 Pfam PF03441 FAD binding domain of DNA photolyase 275 467 1.5E-80 T 14-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 DA442_21795 82eff504a0f66a79e93b545c1cdc57a9 471 Gene3D G3DSA:1.10.579.10 293 471 1.2E-79 T 14-10-2018 DA442_21795 82eff504a0f66a79e93b545c1cdc57a9 471 PRINTS PR00147 DNA photolyase signature 325 341 7.7E-30 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 DA442_21795 82eff504a0f66a79e93b545c1cdc57a9 471 PRINTS PR00147 DNA photolyase signature 384 398 7.7E-30 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 DA442_21795 82eff504a0f66a79e93b545c1cdc57a9 471 PRINTS PR00147 DNA photolyase signature 345 363 7.7E-30 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 DA442_21795 82eff504a0f66a79e93b545c1cdc57a9 471 PRINTS PR00147 DNA photolyase signature 142 158 7.7E-30 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 DA442_21795 82eff504a0f66a79e93b545c1cdc57a9 471 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 345 364 - T 14-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal DA442_21795 82eff504a0f66a79e93b545c1cdc57a9 471 Pfam PF00875 DNA photolyase 3 165 4.5E-46 T 14-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 DA442_21795 82eff504a0f66a79e93b545c1cdc57a9 471 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 325 337 - T 14-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal DA442_21795 82eff504a0f66a79e93b545c1cdc57a9 471 SUPERFAMILY SSF52425 1 185 1.06E-51 T 14-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 DA442_21795 82eff504a0f66a79e93b545c1cdc57a9 471 Gene3D G3DSA:3.40.50.620 3 204 3.3E-78 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DA442_21795 82eff504a0f66a79e93b545c1cdc57a9 471 SUPERFAMILY SSF48173 191 470 3.66E-106 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 DA442_18530 3ec98be92ba4abe97293a2f9992b2b7e 187 Pfam PF00691 OmpA family 88 174 3.4E-17 T 14-10-2018 IPR006665 OmpA-like domain DA442_18530 3ec98be92ba4abe97293a2f9992b2b7e 187 PRINTS PR01021 OMPA domain signature 116 131 5.4E-8 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DA442_18530 3ec98be92ba4abe97293a2f9992b2b7e 187 PRINTS PR01021 OMPA domain signature 131 147 5.4E-8 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DA442_18530 3ec98be92ba4abe97293a2f9992b2b7e 187 Gene3D G3DSA:3.30.1330.60 54 185 2.3E-21 T 14-10-2018 IPR036737 OmpA-like domain superfamily DA442_18530 3ec98be92ba4abe97293a2f9992b2b7e 187 SUPERFAMILY SSF103088 79 186 1.23E-20 T 14-10-2018 IPR036737 OmpA-like domain superfamily DA442_22605 9a45fc258466f5a84f1d1256d56c441f 1329 SUPERFAMILY SSF81296 1106 1153 9.8E-6 T 14-10-2018 IPR014756 Immunoglobulin E-set DA442_22605 9a45fc258466f5a84f1d1256d56c441f 1329 SUPERFAMILY SSF81296 310 412 6.3E-21 T 14-10-2018 IPR014756 Immunoglobulin E-set DA442_22605 9a45fc258466f5a84f1d1256d56c441f 1329 Pfam PF03714 Bacterial pullanase-associated domain 51 171 2.9E-17 T 14-10-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 DA442_22605 9a45fc258466f5a84f1d1256d56c441f 1329 SUPERFAMILY SSF49452 25 171 2.0E-28 T 14-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 DA442_22605 9a45fc258466f5a84f1d1256d56c441f 1329 Gene3D G3DSA:2.60.40.10 303 409 1.2E-29 T 14-10-2018 IPR013783 Immunoglobulin-like fold DA442_22605 9a45fc258466f5a84f1d1256d56c441f 1329 Gene3D G3DSA:2.60.40.10 1095 1160 1.4E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold DA442_22605 9a45fc258466f5a84f1d1256d56c441f 1329 SUPERFAMILY SSF51011 978 1092 5.39E-39 T 14-10-2018 DA442_22605 9a45fc258466f5a84f1d1256d56c441f 1329 Pfam PF11852 Domain of unknown function (DUF3372) 917 1079 7.9E-63 T 14-10-2018 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal DA442_22605 9a45fc258466f5a84f1d1256d56c441f 1329 SUPERFAMILY SSF51445 407 975 6.74E-125 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DA442_22605 9a45fc258466f5a84f1d1256d56c441f 1329 TIGRFAM TIGR02103 pullul_strch: alpha-1,6-glucosidases, pullulanase-type 180 1080 0.0 T 14-10-2018 IPR011839 Alpha-1,6-glucosidases, pullulanase-type GO:0005975|GO:0051060 DA442_22605 9a45fc258466f5a84f1d1256d56c441f 1329 Gene3D G3DSA:3.20.20.80 410 1010 1.2E-216 T 14-10-2018 DA442_22605 9a45fc258466f5a84f1d1256d56c441f 1329 SMART SM00642 552 915 1.9E-4 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DA442_22605 9a45fc258466f5a84f1d1256d56c441f 1329 SUPERFAMILY SSF81296 171 296 1.4E-30 T 14-10-2018 IPR014756 Immunoglobulin E-set DA442_22605 9a45fc258466f5a84f1d1256d56c441f 1329 Gene3D G3DSA:2.60.40.1110 34 170 1.5E-29 T 14-10-2018 DA442_22605 9a45fc258466f5a84f1d1256d56c441f 1329 Gene3D G3DSA:2.60.40.1130 180 296 8.8E-31 T 14-10-2018 DA442_22605 9a45fc258466f5a84f1d1256d56c441f 1329 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 311 395 4.7E-14 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 DA442_22605 9a45fc258466f5a84f1d1256d56c441f 1329 Gene3D G3DSA:2.60.40.1180 1011 1094 1.2E-28 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta DA442_25560 41030bcb5b53148236ca3ba9eaacc53d 355 SMART SM00267 165 344 3.5E-48 T 14-10-2018 IPR000160 GGDEF domain DA442_25560 41030bcb5b53148236ca3ba9eaacc53d 355 Gene3D G3DSA:3.30.450.40 27 179 1.2E-19 T 14-10-2018 IPR029016 GAF-like domain superfamily DA442_25560 41030bcb5b53148236ca3ba9eaacc53d 355 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 179 344 1.6E-48 T 14-10-2018 IPR000160 GGDEF domain DA442_25560 41030bcb5b53148236ca3ba9eaacc53d 355 Pfam PF01590 GAF domain 37 169 1.2E-10 T 14-10-2018 IPR003018 GAF domain GO:0005515 DA442_25560 41030bcb5b53148236ca3ba9eaacc53d 355 SUPERFAMILY SSF55073 188 343 6.83E-47 T 14-10-2018 IPR029787 Nucleotide cyclase DA442_25560 41030bcb5b53148236ca3ba9eaacc53d 355 SMART SM00065 36 180 3.4E-9 T 14-10-2018 IPR003018 GAF domain GO:0005515 DA442_25560 41030bcb5b53148236ca3ba9eaacc53d 355 Pfam PF00990 Diguanylate cyclase, GGDEF domain 183 340 1.6E-43 T 14-10-2018 IPR000160 GGDEF domain DA442_25560 41030bcb5b53148236ca3ba9eaacc53d 355 Gene3D G3DSA:3.30.70.270 180 350 7.1E-55 T 14-10-2018 DA442_25560 41030bcb5b53148236ca3ba9eaacc53d 355 SUPERFAMILY SSF55781 28 171 1.35E-21 T 14-10-2018 DA442_14355 c540aa3ced45e6b94dae2ae2d3bb41b0 595 Pfam PF02436 Conserved carboxylase domain 292 494 3.6E-58 T 14-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 DA442_14355 c540aa3ced45e6b94dae2ae2d3bb41b0 595 Pfam PF00364 Biotin-requiring enzyme 529 593 3.0E-16 T 14-10-2018 IPR000089 Biotin/lipoyl attachment DA442_14355 c540aa3ced45e6b94dae2ae2d3bb41b0 595 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 7 589 8.0E-267 T 14-10-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 DA442_14355 c540aa3ced45e6b94dae2ae2d3bb41b0 595 SUPERFAMILY SSF51569 1 300 1.08E-90 T 14-10-2018 DA442_14355 c540aa3ced45e6b94dae2ae2d3bb41b0 595 SUPERFAMILY SSF51230 522 594 4.58E-20 T 14-10-2018 IPR011053 Single hybrid motif DA442_14355 c540aa3ced45e6b94dae2ae2d3bb41b0 595 Gene3D G3DSA:2.40.50.100 522 595 6.7E-23 T 14-10-2018 DA442_14355 c540aa3ced45e6b94dae2ae2d3bb41b0 595 Pfam PF00682 HMGL-like 6 270 2.5E-60 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 DA442_14355 c540aa3ced45e6b94dae2ae2d3bb41b0 595 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 551 568 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DA442_14355 c540aa3ced45e6b94dae2ae2d3bb41b0 595 Gene3D G3DSA:3.20.20.70 1 464 1.4E-172 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_14355 c540aa3ced45e6b94dae2ae2d3bb41b0 595 SUPERFAMILY SSF89000 297 462 7.06E-51 T 14-10-2018 DA442_18415 f3415c72f312fe6a065e12e460a19b26 182 Gene3D G3DSA:3.40.630.30 2 169 3.4E-32 T 14-10-2018 DA442_18415 f3415c72f312fe6a065e12e460a19b26 182 SUPERFAMILY SSF55729 1 154 1.36E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_18415 f3415c72f312fe6a065e12e460a19b26 182 Pfam PF00583 Acetyltransferase (GNAT) family 49 141 1.8E-14 T 14-10-2018 IPR000182 GNAT domain DA442_20295 47ec73feedd4d39436d9834039e1b5df 252 Pfam PF01048 Phosphorylase superfamily 22 241 8.1E-48 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 DA442_20295 47ec73feedd4d39436d9834039e1b5df 252 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 23 251 1.8E-53 T 14-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DA442_20295 47ec73feedd4d39436d9834039e1b5df 252 SUPERFAMILY SSF53167 22 250 3.27E-63 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 DA442_20295 47ec73feedd4d39436d9834039e1b5df 252 Gene3D G3DSA:3.40.50.1580 19 252 1.3E-66 T 14-10-2018 DA442_22755 096a2282fcb86eb2526b60417fa34b7c 480 Pfam PF02378 Phosphotransferase system, EIIC 14 322 8.1E-81 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DA442_22755 096a2282fcb86eb2526b60417fa34b7c 480 SUPERFAMILY SSF55604 404 476 1.83E-19 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DA442_22755 096a2282fcb86eb2526b60417fa34b7c 480 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 417 434 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DA442_22755 096a2282fcb86eb2526b60417fa34b7c 480 Pfam PF00367 phosphotransferase system, EIIB 408 439 1.6E-13 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DA442_22755 096a2282fcb86eb2526b60417fa34b7c 480 Gene3D G3DSA:3.30.1360.60 400 479 4.3E-26 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DA442_22755 096a2282fcb86eb2526b60417fa34b7c 480 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 478 8.8E-234 T 14-10-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0016021|GO:1904659 DA442_22755 096a2282fcb86eb2526b60417fa34b7c 480 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 380 463 1.5E-16 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 DA442_19500 94815ff935bf402885184479a64d4dd9 368 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 3 358 2.0E-140 T 14-10-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 DA442_19500 94815ff935bf402885184479a64d4dd9 368 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_19500 94815ff935bf402885184479a64d4dd9 368 Pfam PF00005 ABC transporter 17 157 2.3E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_19500 94815ff935bf402885184479a64d4dd9 368 SUPERFAMILY SSF50331 235 358 1.3E-18 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DA442_19500 94815ff935bf402885184479a64d4dd9 368 Gene3D G3DSA:3.40.50.300 6 228 2.0E-56 T 14-10-2018 DA442_19500 94815ff935bf402885184479a64d4dd9 368 Pfam PF03459 TOBE domain 292 358 1.9E-14 T 14-10-2018 IPR005116 Transport-associated OB, type 1 DA442_19500 94815ff935bf402885184479a64d4dd9 368 SMART SM00382 24 206 8.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_19500 94815ff935bf402885184479a64d4dd9 368 Gene3D G3DSA:2.40.50.100 291 359 1.1E-14 T 14-10-2018 DA442_19500 94815ff935bf402885184479a64d4dd9 368 SUPERFAMILY SSF52540 11 235 4.2E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_16145 d4bb9638019c9e175adec8ed9f0c8f46 599 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 14-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DA442_16145 d4bb9638019c9e175adec8ed9f0c8f46 599 SUPERFAMILY SSF56425 227 358 3.59E-41 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DA442_16145 d4bb9638019c9e175adec8ed9f0c8f46 599 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 3 582 0.0 T 14-10-2018 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 DA442_16145 d4bb9638019c9e175adec8ed9f0c8f46 599 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 1.6E-37 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DA442_16145 d4bb9638019c9e175adec8ed9f0c8f46 599 Gene3D G3DSA:4.10.80.40 543 577 1.0E-16 T 14-10-2018 DA442_16145 d4bb9638019c9e175adec8ed9f0c8f46 599 Gene3D G3DSA:3.50.50.60 7 409 1.0E-161 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_16145 d4bb9638019c9e175adec8ed9f0c8f46 599 Gene3D G3DSA:1.20.58.100 424 538 1.3E-35 T 14-10-2018 DA442_16145 d4bb9638019c9e175adec8ed9f0c8f46 599 SUPERFAMILY SSF51905 3 441 2.44E-74 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_16145 d4bb9638019c9e175adec8ed9f0c8f46 599 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 8.4E-5 T 14-10-2018 DA442_16145 d4bb9638019c9e175adec8ed9f0c8f46 599 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 8.4E-5 T 14-10-2018 DA442_16145 d4bb9638019c9e175adec8ed9f0c8f46 599 Pfam PF00890 FAD binding domain 7 397 4.2E-113 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 DA442_16145 d4bb9638019c9e175adec8ed9f0c8f46 599 PIRSF PIRSF000171 1 574 1.1E-45 T 14-10-2018 DA442_16145 d4bb9638019c9e175adec8ed9f0c8f46 599 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 6.1E-9 T 14-10-2018 DA442_16145 d4bb9638019c9e175adec8ed9f0c8f46 599 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 6.1E-9 T 14-10-2018 DA442_16145 d4bb9638019c9e175adec8ed9f0c8f46 599 SUPERFAMILY SSF46977 444 581 8.37E-44 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DA442_16145 d4bb9638019c9e175adec8ed9f0c8f46 599 Gene3D G3DSA:3.90.700.10 237 363 1.0E-161 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DA442_16145 d4bb9638019c9e175adec8ed9f0c8f46 599 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 2.6E-236 T 14-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DA442_12860 f7c95d07fb59eb6d3bfea361927bacf6 41 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 3.9E-7 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_12860 f7c95d07fb59eb6d3bfea361927bacf6 41 SUPERFAMILY SSF57840 5 40 1.44E-13 T 14-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_12860 f7c95d07fb59eb6d3bfea361927bacf6 41 Pfam PF00444 Ribosomal protein L36 1 40 4.6E-16 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_12860 f7c95d07fb59eb6d3bfea361927bacf6 41 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 15.88 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_12860 f7c95d07fb59eb6d3bfea361927bacf6 41 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_23030 75b16a6264790096721d7ab51eb7b9d4 177 SUPERFAMILY SSF55729 2 171 8.85E-33 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_23030 75b16a6264790096721d7ab51eb7b9d4 177 Gene3D G3DSA:3.40.630.30 2 171 8.5E-34 T 14-10-2018 DA442_23030 75b16a6264790096721d7ab51eb7b9d4 177 Pfam PF13302 Acetyltransferase (GNAT) domain 11 147 1.7E-23 T 14-10-2018 IPR000182 GNAT domain DA442_16160 552a227d96a7d7efba79b7b698a5c63a 125 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 11 125 7.0E-50 T 14-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 DA442_16160 552a227d96a7d7efba79b7b698a5c63a 125 Pfam PF02313 Fumarate reductase subunit D 11 123 4.2E-44 T 14-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 DA442_16160 552a227d96a7d7efba79b7b698a5c63a 125 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 7 125 24.893 T 14-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 DA442_16160 552a227d96a7d7efba79b7b698a5c63a 125 SUPERFAMILY SSF81343 7 125 4.36E-51 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DA442_16160 552a227d96a7d7efba79b7b698a5c63a 125 Gene3D G3DSA:1.20.1300.10 6 125 1.6E-44 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DA442_16160 552a227d96a7d7efba79b7b698a5c63a 125 PIRSF PIRSF000179 6 125 8.9E-56 T 14-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 DA442_04350 78b3d2a78de4db31ad703d8104929be8 378 SUPERFAMILY SSF51338 1 53 1.5E-19 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DA442_04350 78b3d2a78de4db31ad703d8104929be8 378 Pfam PF01979 Amidohydrolase family 51 374 1.6E-37 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DA442_04350 78b3d2a78de4db31ad703d8104929be8 378 Gene3D G3DSA:3.20.20.140 55 341 7.2E-143 T 14-10-2018 DA442_04350 78b3d2a78de4db31ad703d8104929be8 378 Gene3D G3DSA:2.30.40.10 6 373 7.2E-143 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DA442_04350 78b3d2a78de4db31ad703d8104929be8 378 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 374 7.9E-155 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 DA442_04350 78b3d2a78de4db31ad703d8104929be8 378 PIRSF PIRSF038994 1 378 1.6E-121 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 DA442_04350 78b3d2a78de4db31ad703d8104929be8 378 SUPERFAMILY SSF51556 54 347 1.13E-101 T 14-10-2018 IPR032466 Metal-dependent hydrolase DA442_14630 3ffdc54628a9a361b7228117933c7e51 192 SUPERFAMILY SSF101327 6 178 4.18E-46 T 14-10-2018 IPR036255 YgfB-like superfamily DA442_14630 3ffdc54628a9a361b7228117933c7e51 192 Pfam PF03695 Uncharacterised protein family (UPF0149) 12 179 5.5E-36 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 DA442_14630 3ffdc54628a9a361b7228117933c7e51 192 Gene3D G3DSA:1.20.120.740 4 192 2.3E-50 T 14-10-2018 DA442_14630 3ffdc54628a9a361b7228117933c7e51 192 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 5 190 33.015 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 DA442_07320 479a5e5501c4ad39311f9526f1716acf 268 SMART SM00382 38 227 7.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_07320 479a5e5501c4ad39311f9526f1716acf 268 Pfam PF00005 ABC transporter 29 178 2.0E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_07320 479a5e5501c4ad39311f9526f1716acf 268 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_07320 479a5e5501c4ad39311f9526f1716acf 268 Gene3D G3DSA:3.40.50.300 14 267 7.6E-57 T 14-10-2018 DA442_07320 479a5e5501c4ad39311f9526f1716acf 268 SUPERFAMILY SSF52540 15 251 1.24E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_17185 be2c02f6edbab5e79321bf084b10d06b 375 SMART SM00876 256 364 2.5E-35 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 DA442_17185 be2c02f6edbab5e79321bf084b10d06b 375 Pfam PF04055 Radical SAM superfamily 81 223 7.6E-10 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DA442_17185 be2c02f6edbab5e79321bf084b10d06b 375 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 2 371 2.4E-182 T 14-10-2018 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 DA442_17185 be2c02f6edbab5e79321bf084b10d06b 375 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 256 362 3.6E-26 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 DA442_17185 be2c02f6edbab5e79321bf084b10d06b 375 Gene3D G3DSA:3.20.20.70 8 368 2.8E-107 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_17185 be2c02f6edbab5e79321bf084b10d06b 375 SUPERFAMILY SSF102114 37 366 4.58E-55 T 14-10-2018 DA442_11490 596e6058815fed6d7218b64b8abddb36 272 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 DA442_11490 596e6058815fed6d7218b64b8abddb36 272 Gene3D G3DSA:3.30.470.10 1 106 2.8E-25 T 14-10-2018 DA442_11490 596e6058815fed6d7218b64b8abddb36 272 Gene3D G3DSA:3.20.10.10 113 272 5.5E-53 T 14-10-2018 DA442_11490 596e6058815fed6d7218b64b8abddb36 272 SUPERFAMILY SSF56752 1 267 3.27E-70 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 DA442_11490 596e6058815fed6d7218b64b8abddb36 272 Pfam PF01063 Amino-transferase class IV 24 247 1.6E-46 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 DA442_11490 596e6058815fed6d7218b64b8abddb36 272 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 267 1.4E-108 T 14-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 DA442_16485 8e11ba72fe295aeeb4fe400453b4c464 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 3.7E-11 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DA442_16485 8e11ba72fe295aeeb4fe400453b4c464 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 3.7E-11 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DA442_16485 8e11ba72fe295aeeb4fe400453b4c464 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 3.7E-11 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DA442_16485 8e11ba72fe295aeeb4fe400453b4c464 132 SMART SM00422 2 71 4.1E-30 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DA442_16485 8e11ba72fe295aeeb4fe400453b4c464 132 Pfam PF13411 MerR HTH family regulatory protein 3 69 1.3E-17 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DA442_16485 8e11ba72fe295aeeb4fe400453b4c464 132 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 132 7.3E-70 T 14-10-2018 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 DA442_16485 8e11ba72fe295aeeb4fe400453b4c464 132 SUPERFAMILY SSF46955 2 121 4.76E-34 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DA442_16485 8e11ba72fe295aeeb4fe400453b4c464 132 Gene3D G3DSA:1.10.1660.10 1 130 8.7E-37 T 14-10-2018 DA442_17580 3b57513f96d1d7bd5ed089cd9320d235 63 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 10 60 1.5E-8 T 14-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 DA442_17580 3b57513f96d1d7bd5ed089cd9320d235 63 SUPERFAMILY SSF46955 10 62 2.2E-10 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DA442_17580 3b57513f96d1d7bd5ed089cd9320d235 63 Gene3D G3DSA:1.10.1660.10 6 62 1.3E-6 T 14-10-2018 DA442_17580 3b57513f96d1d7bd5ed089cd9320d235 63 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 9 60 4.3E-11 T 14-10-2018 IPR010260 DNA-binding transcriptional activator AlpA DA442_02295 e3885cf8f858dd87a8ff34071d9b0f9a 196 Gene3D G3DSA:3.40.50.10490 1 195 1.4E-72 T 14-10-2018 DA442_02295 e3885cf8f858dd87a8ff34071d9b0f9a 196 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 34.37 T 14-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 DA442_02295 e3885cf8f858dd87a8ff34071d9b0f9a 196 Pfam PF13580 SIS domain 9 144 1.7E-34 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DA442_02295 e3885cf8f858dd87a8ff34071d9b0f9a 196 SUPERFAMILY SSF53697 1 191 1.05E-56 T 14-10-2018 DA442_03990 871b2053d1c2e6a23cdc745a630d6334 911 SUPERFAMILY SSF55008 2 62 2.62E-8 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 DA442_03990 871b2053d1c2e6a23cdc745a630d6334 911 Gene3D G3DSA:3.40.50.1000 579 848 7.5E-95 T 14-10-2018 IPR023214 HAD superfamily DA442_03990 871b2053d1c2e6a23cdc745a630d6334 911 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 600 606 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 DA442_03990 871b2053d1c2e6a23cdc745a630d6334 911 Pfam PF00403 Heavy-metal-associated domain 6 61 2.0E-6 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 DA442_03990 871b2053d1c2e6a23cdc745a630d6334 911 Pfam PF00403 Heavy-metal-associated domain 177 236 4.2E-14 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 DA442_03990 871b2053d1c2e6a23cdc745a630d6334 911 SUPERFAMILY SSF81653 399 496 2.75E-25 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 DA442_03990 871b2053d1c2e6a23cdc745a630d6334 911 SUPERFAMILY SSF81665 362 862 1.31E-9 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 DA442_03990 871b2053d1c2e6a23cdc745a630d6334 911 SUPERFAMILY SSF55008 65 125 9.56E-7 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 DA442_03990 871b2053d1c2e6a23cdc745a630d6334 911 Gene3D G3DSA:3.40.1110.10 609 728 7.5E-95 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DA442_03990 871b2053d1c2e6a23cdc745a630d6334 911 Pfam PF00122 E1-E2 ATPase 397 577 1.7E-48 T 14-10-2018 DA442_03990 871b2053d1c2e6a23cdc745a630d6334 911 Gene3D G3DSA:3.30.70.100 64 127 1.3E-5 T 14-10-2018 DA442_03990 871b2053d1c2e6a23cdc745a630d6334 911 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 310 906 6.5E-183 T 14-10-2018 DA442_03990 871b2053d1c2e6a23cdc745a630d6334 911 SUPERFAMILY SSF56784 596 902 2.27E-59 T 14-10-2018 IPR036412 HAD-like superfamily DA442_03990 871b2053d1c2e6a23cdc745a630d6334 911 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 329 905 4.3E-183 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DA442_03990 871b2053d1c2e6a23cdc745a630d6334 911 PRINTS PR00943 Copper-transporting ATPase signature 581 596 2.0E-13 T 14-10-2018 DA442_03990 871b2053d1c2e6a23cdc745a630d6334 911 PRINTS PR00943 Copper-transporting ATPase signature 519 533 2.0E-13 T 14-10-2018 DA442_03990 871b2053d1c2e6a23cdc745a630d6334 911 PRINTS PR00943 Copper-transporting ATPase signature 314 333 2.0E-13 T 14-10-2018 DA442_03990 871b2053d1c2e6a23cdc745a630d6334 911 PRINTS PR00943 Copper-transporting ATPase signature 217 237 2.0E-13 T 14-10-2018 DA442_03990 871b2053d1c2e6a23cdc745a630d6334 911 PRINTS PR00943 Copper-transporting ATPase signature 386 404 2.0E-13 T 14-10-2018 DA442_03990 871b2053d1c2e6a23cdc745a630d6334 911 PRINTS PR00943 Copper-transporting ATPase signature 187 201 2.0E-13 T 14-10-2018 DA442_03990 871b2053d1c2e6a23cdc745a630d6334 911 PRINTS PR00943 Copper-transporting ATPase signature 869 883 2.0E-13 T 14-10-2018 DA442_03990 871b2053d1c2e6a23cdc745a630d6334 911 PRINTS PR00943 Copper-transporting ATPase signature 773 790 2.0E-13 T 14-10-2018 DA442_03990 871b2053d1c2e6a23cdc745a630d6334 911 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 368 874 1.4E-92 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DA442_03990 871b2053d1c2e6a23cdc745a630d6334 911 Pfam PF00702 haloacid dehalogenase-like hydrolase 594 807 6.9E-48 T 14-10-2018 DA442_03990 871b2053d1c2e6a23cdc745a630d6334 911 Gene3D G3DSA:3.30.70.100 6 63 1.3E-7 T 14-10-2018 DA442_03990 871b2053d1c2e6a23cdc745a630d6334 911 Gene3D G3DSA:2.70.150.20 384 500 7.9E-37 T 14-10-2018 DA442_03990 871b2053d1c2e6a23cdc745a630d6334 911 Gene3D G3DSA:3.30.70.100 171 252 6.0E-18 T 14-10-2018 DA442_03990 871b2053d1c2e6a23cdc745a630d6334 911 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 598 612 4.0E-27 T 14-10-2018 DA442_03990 871b2053d1c2e6a23cdc745a630d6334 911 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 446 460 4.0E-27 T 14-10-2018 DA442_03990 871b2053d1c2e6a23cdc745a630d6334 911 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 721 732 4.0E-27 T 14-10-2018 DA442_03990 871b2053d1c2e6a23cdc745a630d6334 911 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 743 753 4.0E-27 T 14-10-2018 DA442_03990 871b2053d1c2e6a23cdc745a630d6334 911 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 819 831 4.0E-27 T 14-10-2018 DA442_03990 871b2053d1c2e6a23cdc745a630d6334 911 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 796 815 4.0E-27 T 14-10-2018 DA442_03990 871b2053d1c2e6a23cdc745a630d6334 911 ProSitePatterns PS01047 Heavy-metal-associated domain. 177 206 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 DA442_03990 871b2053d1c2e6a23cdc745a630d6334 911 SUPERFAMILY SSF55008 167 240 1.06E-16 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 DA442_20675 ee8fdf844c4136b726db729c4c07c9e9 145 SUPERFAMILY SSF55785 10 127 7.5E-12 T 14-10-2018 IPR035965 PAS domain superfamily DA442_20675 ee8fdf844c4136b726db729c4c07c9e9 145 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 16 77 1.3E-5 T 14-10-2018 IPR000014 PAS domain DA442_20675 ee8fdf844c4136b726db729c4c07c9e9 145 Gene3D G3DSA:3.30.450.20 6 140 1.2E-31 T 14-10-2018 DA442_20675 ee8fdf844c4136b726db729c4c07c9e9 145 SMART SM00091 12 78 0.0096 T 14-10-2018 IPR000014 PAS domain DA442_20675 ee8fdf844c4136b726db729c4c07c9e9 145 Pfam PF00989 PAS fold 16 134 2.0E-6 T 14-10-2018 IPR013767 PAS fold GO:0006355 DA442_18650 6f1fa5a7b8a65b2c5843ef90f33b68b3 697 Gene3D G3DSA:3.10.450.490 35 121 7.0E-33 T 14-10-2018 DA442_18650 6f1fa5a7b8a65b2c5843ef90f33b68b3 697 Pfam PF03413 Peptidase propeptide and YPEB domain 127 200 2.8E-10 T 14-10-2018 IPR025711 PepSY domain DA442_18650 6f1fa5a7b8a65b2c5843ef90f33b68b3 697 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 538 606 5.3E-15 T 14-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial DA442_18650 6f1fa5a7b8a65b2c5843ef90f33b68b3 697 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 65 111 3.5E-18 T 14-10-2018 IPR011096 FTP domain DA442_18650 6f1fa5a7b8a65b2c5843ef90f33b68b3 697 SUPERFAMILY SSF55486 207 504 1.41E-83 T 14-10-2018 DA442_18650 6f1fa5a7b8a65b2c5843ef90f33b68b3 697 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 216 354 9.9E-39 T 14-10-2018 IPR013856 Peptidase M4 domain GO:0004222 DA442_18650 6f1fa5a7b8a65b2c5843ef90f33b68b3 697 Gene3D G3DSA:3.10.450.40 123 205 3.4E-21 T 14-10-2018 DA442_18650 6f1fa5a7b8a65b2c5843ef90f33b68b3 697 Gene3D G3DSA:1.10.390.10 359 507 2.3E-52 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily DA442_18650 6f1fa5a7b8a65b2c5843ef90f33b68b3 697 Gene3D G3DSA:2.60.120.380 519 619 5.2E-32 T 14-10-2018 DA442_18650 6f1fa5a7b8a65b2c5843ef90f33b68b3 697 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 357 502 2.7E-39 T 14-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 DA442_18650 6f1fa5a7b8a65b2c5843ef90f33b68b3 697 Gene3D G3DSA:3.10.170.10 206 358 5.0E-61 T 14-10-2018 DA442_18650 6f1fa5a7b8a65b2c5843ef90f33b68b3 697 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 311 331 1.1E-25 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 DA442_18650 6f1fa5a7b8a65b2c5843ef90f33b68b3 697 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 366 377 1.1E-25 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 DA442_18650 6f1fa5a7b8a65b2c5843ef90f33b68b3 697 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 345 361 1.1E-25 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 DA442_18650 6f1fa5a7b8a65b2c5843ef90f33b68b3 697 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 429 445 1.1E-25 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 DA442_04585 09f246208c49e6283e22081f9767f5b0 314 SUPERFAMILY SSF46785 8 90 7.9E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_04585 09f246208c49e6283e22081f9767f5b0 314 Pfam PF03466 LysR substrate binding domain 90 295 2.2E-42 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_04585 09f246208c49e6283e22081f9767f5b0 314 SUPERFAMILY SSF53850 90 299 7.6E-45 T 14-10-2018 DA442_04585 09f246208c49e6283e22081f9767f5b0 314 Gene3D G3DSA:3.40.190.10 94 293 4.9E-57 T 14-10-2018 DA442_04585 09f246208c49e6283e22081f9767f5b0 314 Gene3D G3DSA:1.10.10.10 5 92 5.8E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_04585 09f246208c49e6283e22081f9767f5b0 314 Gene3D G3DSA:3.40.190.10 165 267 4.9E-57 T 14-10-2018 DA442_04585 09f246208c49e6283e22081f9767f5b0 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 6.1E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_20435 096c90ecbdf6d233efe93da9b6fd836f 682 SUPERFAMILY SSF48452 217 399 9.76E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_20435 096c90ecbdf6d233efe93da9b6fd836f 682 Gene3D G3DSA:1.25.40.10 197 397 6.1E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_20435 096c90ecbdf6d233efe93da9b6fd836f 682 SMART SM00028 74 107 220.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_20435 096c90ecbdf6d233efe93da9b6fd836f 682 SMART SM00028 232 265 21.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_20435 096c90ecbdf6d233efe93da9b6fd836f 682 SMART SM00028 152 185 20.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_20435 096c90ecbdf6d233efe93da9b6fd836f 682 Pfam PF00990 Diguanylate cyclase, GGDEF domain 534 674 4.1E-38 T 14-10-2018 IPR000160 GGDEF domain DA442_20435 096c90ecbdf6d233efe93da9b6fd836f 682 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 531 678 8.8E-43 T 14-10-2018 IPR000160 GGDEF domain DA442_20435 096c90ecbdf6d233efe93da9b6fd836f 682 Gene3D G3DSA:1.25.40.10 54 186 9.5E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_20435 096c90ecbdf6d233efe93da9b6fd836f 682 SUPERFAMILY SSF55073 543 677 1.41E-41 T 14-10-2018 IPR029787 Nucleotide cyclase DA442_20435 096c90ecbdf6d233efe93da9b6fd836f 682 SUPERFAMILY SSF48452 74 227 5.42E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_20435 096c90ecbdf6d233efe93da9b6fd836f 682 SMART SM00267 505 679 1.0E-40 T 14-10-2018 IPR000160 GGDEF domain DA442_12410 436e6835573fa5e7b290ba1378de0ce7 348 SUPERFAMILY SSF101801 247 322 1.96E-13 T 14-10-2018 IPR036429 SpoA-like superfamily DA442_12410 436e6835573fa5e7b290ba1378de0ce7 348 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 250 319 9.7E-17 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) DA442_12410 436e6835573fa5e7b290ba1378de0ce7 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 9.9E-19 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 DA442_12410 436e6835573fa5e7b290ba1378de0ce7 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 88 104 9.9E-19 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 DA442_12410 436e6835573fa5e7b290ba1378de0ce7 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 113 132 9.9E-19 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 DA442_12410 436e6835573fa5e7b290ba1378de0ce7 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 9.9E-19 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 DA442_12410 436e6835573fa5e7b290ba1378de0ce7 348 Gene3D G3DSA:3.40.1550.10 43 230 1.3E-55 T 14-10-2018 IPR028976 CheC-like superfamily DA442_12410 436e6835573fa5e7b290ba1378de0ce7 348 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 320 6.9E-125 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 DA442_12410 436e6835573fa5e7b290ba1378de0ce7 348 SUPERFAMILY SSF103039 4 230 5.49E-21 T 14-10-2018 IPR028976 CheC-like superfamily DA442_12410 436e6835573fa5e7b290ba1378de0ce7 348 PIRSF PIRSF002888 1 328 9.3E-92 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 DA442_12410 436e6835573fa5e7b290ba1378de0ce7 348 Pfam PF02154 Flagellar motor switch protein FliM 37 229 2.2E-83 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 DA442_15075 fa9bc0ef61cd02c624a5922cb5ce527a 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 332 1.7E-132 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DA442_15075 fa9bc0ef61cd02c624a5922cb5ce527a 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 2.4E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DA442_15075 fa9bc0ef61cd02c624a5922cb5ce527a 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 2.4E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DA442_15075 fa9bc0ef61cd02c624a5922cb5ce527a 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 2.4E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DA442_15075 fa9bc0ef61cd02c624a5922cb5ce527a 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 2.4E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DA442_15075 fa9bc0ef61cd02c624a5922cb5ce527a 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DA442_15075 fa9bc0ef61cd02c624a5922cb5ce527a 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 330 5.3E-56 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 DA442_15075 fa9bc0ef61cd02c624a5922cb5ce527a 334 Gene3D G3DSA:3.40.50.1370 5 329 1.8E-145 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DA442_15075 fa9bc0ef61cd02c624a5922cb5ce527a 334 Gene3D G3DSA:3.40.50.1370 151 319 1.8E-145 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DA442_15075 fa9bc0ef61cd02c624a5922cb5ce527a 334 SUPERFAMILY SSF53671 4 333 6.29E-99 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DA442_15075 fa9bc0ef61cd02c624a5922cb5ce527a 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 333 83.355 T 14-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 DA442_15075 fa9bc0ef61cd02c624a5922cb5ce527a 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 4.1E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DA442_15075 fa9bc0ef61cd02c624a5922cb5ce527a 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 4.1E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DA442_15075 fa9bc0ef61cd02c624a5922cb5ce527a 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 4.1E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DA442_15075 fa9bc0ef61cd02c624a5922cb5ce527a 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 4.1E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DA442_15075 fa9bc0ef61cd02c624a5922cb5ce527a 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 4.1E-32 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DA442_15075 fa9bc0ef61cd02c624a5922cb5ce527a 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 3.1E-46 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 DA442_06965 f79827e4d08971ac23f10316acd1f050 310 Pfam PF00589 Phage integrase family 166 296 1.1E-7 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DA442_06965 f79827e4d08971ac23f10316acd1f050 310 SUPERFAMILY SSF56349 5 302 2.94E-20 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DA442_06965 f79827e4d08971ac23f10316acd1f050 310 Gene3D G3DSA:1.10.150.130 1 88 2.9E-5 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal DA442_06965 f79827e4d08971ac23f10316acd1f050 310 Gene3D G3DSA:1.10.443.10 146 305 6.6E-15 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DA442_06065 de1da0cb9dbc05c8160eee52bdbcfdf9 309 SUPERFAMILY SSF53474 28 305 8.25E-48 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_06065 de1da0cb9dbc05c8160eee52bdbcfdf9 309 Pfam PF00561 alpha/beta hydrolase fold 33 186 1.3E-15 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DA442_06065 de1da0cb9dbc05c8160eee52bdbcfdf9 309 Gene3D G3DSA:3.40.50.1820 26 309 5.8E-88 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_06505 5bc1d8e43f52cfee9d9d53ec046b812f 231 PIRSF PIRSF028111 1 230 2.2E-84 T 14-10-2018 IPR016868 Bacteriophage B3, Orf5 DA442_06505 5bc1d8e43f52cfee9d9d53ec046b812f 231 Pfam PF10979 Protein of unknown function (DUF2786) 5 42 2.8E-12 T 14-10-2018 IPR024498 Domain of unknown function DUF2786 DA442_21360 27dcacd6393e6c85a9f1bb28cf1350ff 285 Gene3D G3DSA:3.40.30.10 17 254 8.7E-111 T 14-10-2018 DA442_21360 27dcacd6393e6c85a9f1bb28cf1350ff 285 Pfam PF13410 Glutathione S-transferase, C-terminal domain 176 244 6.0E-10 T 14-10-2018 DA442_21360 27dcacd6393e6c85a9f1bb28cf1350ff 285 Gene3D G3DSA:1.20.1050.10 132 248 8.7E-111 T 14-10-2018 DA442_21360 27dcacd6393e6c85a9f1bb28cf1350ff 285 Pfam PF02798 Glutathione S-transferase, N-terminal domain 64 126 2.8E-6 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DA442_21360 27dcacd6393e6c85a9f1bb28cf1350ff 285 SUPERFAMILY SSF52833 38 130 6.83E-16 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_21360 27dcacd6393e6c85a9f1bb28cf1350ff 285 SUPERFAMILY SSF47616 116 258 1.06E-31 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DA442_05590 04cf26e5df3d4a036051a2bb673258c4 186 Pfam PF00239 Resolvase, N terminal domain 4 140 2.8E-34 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 DA442_05590 04cf26e5df3d4a036051a2bb673258c4 186 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 DA442_05590 04cf26e5df3d4a036051a2bb673258c4 186 SUPERFAMILY SSF53041 1 140 9.55E-37 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 DA442_05590 04cf26e5df3d4a036051a2bb673258c4 186 SMART SM00857 3 140 2.3E-39 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 DA442_05590 04cf26e5df3d4a036051a2bb673258c4 186 Gene3D G3DSA:1.10.10.60 142 184 3.2E-6 T 14-10-2018 DA442_05590 04cf26e5df3d4a036051a2bb673258c4 186 Pfam PF02796 Helix-turn-helix domain of resolvase 142 182 6.5E-6 T 14-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 DA442_05590 04cf26e5df3d4a036051a2bb673258c4 186 Gene3D G3DSA:3.40.50.1390 1 123 2.3E-36 T 14-10-2018 DA442_02540 5a332b5be860575171aef24ea3f2cf00 318 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 96 107 - T 14-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 DA442_02540 5a332b5be860575171aef24ea3f2cf00 318 Pfam PF08544 GHMP kinases C terminal 218 291 3.4E-9 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain DA442_02540 5a332b5be860575171aef24ea3f2cf00 318 Hamap MF_00384 Homoserine kinase [thrB]. 5 314 29.128 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 DA442_02540 5a332b5be860575171aef24ea3f2cf00 318 SUPERFAMILY SSF55060 178 294 5.76E-33 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily DA442_02540 5a332b5be860575171aef24ea3f2cf00 318 PIRSF PIRSF000676 1 316 4.1E-80 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 DA442_02540 5a332b5be860575171aef24ea3f2cf00 318 SUPERFAMILY SSF54211 4 191 1.82E-34 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DA442_02540 5a332b5be860575171aef24ea3f2cf00 318 PRINTS PR00958 Homoserine kinase signature 143 156 9.5E-31 T 14-10-2018 DA442_02540 5a332b5be860575171aef24ea3f2cf00 318 PRINTS PR00958 Homoserine kinase signature 181 198 9.5E-31 T 14-10-2018 DA442_02540 5a332b5be860575171aef24ea3f2cf00 318 PRINTS PR00958 Homoserine kinase signature 10 25 9.5E-31 T 14-10-2018 DA442_02540 5a332b5be860575171aef24ea3f2cf00 318 PRINTS PR00958 Homoserine kinase signature 260 275 9.5E-31 T 14-10-2018 DA442_02540 5a332b5be860575171aef24ea3f2cf00 318 PRINTS PR00958 Homoserine kinase signature 103 118 9.5E-31 T 14-10-2018 DA442_02540 5a332b5be860575171aef24ea3f2cf00 318 TIGRFAM TIGR00191 thrB: homoserine kinase 3 314 3.4E-109 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 DA442_02540 5a332b5be860575171aef24ea3f2cf00 318 Gene3D G3DSA:3.30.230.10 5 173 3.6E-89 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DA442_02540 5a332b5be860575171aef24ea3f2cf00 318 Gene3D G3DSA:3.30.70.890 174 283 3.6E-89 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily DA442_02540 5a332b5be860575171aef24ea3f2cf00 318 Pfam PF00288 GHMP kinases N terminal domain 90 156 4.5E-13 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 DA442_06130 6e2b8a39566bd44984b172458e8399fe 215 SMART SM00382 28 214 7.0E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_06130 6e2b8a39566bd44984b172458e8399fe 215 SUPERFAMILY SSF52540 10 199 3.1E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_06130 6e2b8a39566bd44984b172458e8399fe 215 Pfam PF00005 ABC transporter 22 163 8.3E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_06130 6e2b8a39566bd44984b172458e8399fe 215 Gene3D G3DSA:3.40.50.300 1 205 6.7E-52 T 14-10-2018 DA442_06580 070ac683e597a207494e9cfb26acddbf 117 SUPERFAMILY SSF74731 2 116 5.62E-50 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_06580 070ac683e597a207494e9cfb26acddbf 117 Gene3D G3DSA:1.10.1900.20 56 117 1.0E-28 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_06580 070ac683e597a207494e9cfb26acddbf 117 Gene3D G3DSA:1.10.720.90 2 55 1.1E-24 T 14-10-2018 DA442_06580 070ac683e597a207494e9cfb26acddbf 117 Pfam PF00453 Ribosomal protein L20 3 108 9.9E-49 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_06580 070ac683e597a207494e9cfb26acddbf 117 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.596 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_06580 070ac683e597a207494e9cfb26acddbf 117 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_06580 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 42 71 4.8E-42 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_06580 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 12 41 4.8E-42 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_06580 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 75 101 4.8E-42 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_06580 070ac683e597a207494e9cfb26acddbf 117 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 2.5E-52 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_06580 070ac683e597a207494e9cfb26acddbf 117 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 2.0E-22 T 14-10-2018 DA442_14460 22f4392f9bd06bfc2b0e3d6783c2d116 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 7 204 3.8E-71 T 14-10-2018 DA442_14460 22f4392f9bd06bfc2b0e3d6783c2d116 208 SUPERFAMILY SSF53335 14 204 3.53E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_14460 22f4392f9bd06bfc2b0e3d6783c2d116 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 DA442_14460 22f4392f9bd06bfc2b0e3d6783c2d116 208 Gene3D G3DSA:3.40.50.150 2 206 2.2E-75 T 14-10-2018 DA442_14460 22f4392f9bd06bfc2b0e3d6783c2d116 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 38.618 T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 DA442_14460 22f4392f9bd06bfc2b0e3d6783c2d116 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 5 206 2.2E-82 T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 DA442_13440 af49200693b9754d0fa9b03c82f0beb0 215 Pfam PF00717 Peptidase S24-like 126 200 2.5E-15 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C DA442_13440 af49200693b9754d0fa9b03c82f0beb0 215 SUPERFAMILY SSF47413 4 64 8.16E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DA442_13440 af49200693b9754d0fa9b03c82f0beb0 215 SMART SM00530 7 61 1.6E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DA442_13440 af49200693b9754d0fa9b03c82f0beb0 215 Pfam PF01381 Helix-turn-helix 16 61 2.1E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DA442_13440 af49200693b9754d0fa9b03c82f0beb0 215 Gene3D G3DSA:1.10.260.40 1 68 8.6E-24 T 14-10-2018 DA442_13440 af49200693b9754d0fa9b03c82f0beb0 215 Gene3D G3DSA:2.10.109.10 81 210 2.5E-49 T 14-10-2018 DA442_13440 af49200693b9754d0fa9b03c82f0beb0 215 SUPERFAMILY SSF51306 84 212 2.62E-28 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily DA442_13565 bd24cc15a5fdfc2e63f5df56991b12e8 139 PIRSF PIRSF002070 1 138 2.5E-21 T 14-10-2018 DA442_13565 bd24cc15a5fdfc2e63f5df56991b12e8 139 Pfam PF00436 Single-strand binding protein family 3 107 2.8E-19 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 DA442_13565 bd24cc15a5fdfc2e63f5df56991b12e8 139 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 124 1.9E-24 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 DA442_13565 bd24cc15a5fdfc2e63f5df56991b12e8 139 SUPERFAMILY SSF50249 1 128 4.8E-30 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_13565 bd24cc15a5fdfc2e63f5df56991b12e8 139 Hamap MF_00984 Single-stranded DNA-binding protein. 2 113 22.331 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 DA442_13565 bd24cc15a5fdfc2e63f5df56991b12e8 139 Gene3D G3DSA:2.40.50.140 1 125 2.6E-30 T 14-10-2018 DA442_20375 6e6b7fc9eae2748166c580869467170c 907 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 355 474 3.4E-9 T 14-10-2018 IPR000014 PAS domain DA442_20375 6e6b7fc9eae2748166c580869467170c 907 SMART SM00052 646 896 5.0E-97 T 14-10-2018 IPR001633 EAL domain DA442_20375 6e6b7fc9eae2748166c580869467170c 907 SUPERFAMILY SSF55073 485 618 8.63E-15 T 14-10-2018 IPR029787 Nucleotide cyclase DA442_20375 6e6b7fc9eae2748166c580869467170c 907 SMART SM00091 358 424 3.3E-4 T 14-10-2018 IPR000014 PAS domain DA442_20375 6e6b7fc9eae2748166c580869467170c 907 Pfam PF00563 EAL domain 652 891 3.6E-69 T 14-10-2018 IPR001633 EAL domain DA442_20375 6e6b7fc9eae2748166c580869467170c 907 SMART SM00267 468 634 4.4E-7 T 14-10-2018 IPR000160 GGDEF domain DA442_20375 6e6b7fc9eae2748166c580869467170c 907 Gene3D G3DSA:3.30.70.270 468 624 3.8E-16 T 14-10-2018 DA442_20375 6e6b7fc9eae2748166c580869467170c 907 Pfam PF13426 PAS domain 370 467 1.3E-9 T 14-10-2018 IPR000014 PAS domain DA442_20375 6e6b7fc9eae2748166c580869467170c 907 SUPERFAMILY SSF55785 349 465 1.87E-11 T 14-10-2018 IPR035965 PAS domain superfamily DA442_20375 6e6b7fc9eae2748166c580869467170c 907 Gene3D G3DSA:3.30.450.20 357 467 3.7E-13 T 14-10-2018 DA442_20375 6e6b7fc9eae2748166c580869467170c 907 SUPERFAMILY SSF141868 652 901 2.22E-79 T 14-10-2018 IPR035919 EAL domain superfamily DA442_20375 6e6b7fc9eae2748166c580869467170c 907 Gene3D G3DSA:3.20.20.450 648 903 5.9E-82 T 14-10-2018 IPR035919 EAL domain superfamily DA442_20375 6e6b7fc9eae2748166c580869467170c 907 Pfam PF00990 Diguanylate cyclase, GGDEF domain 480 595 1.5E-13 T 14-10-2018 IPR000160 GGDEF domain DA442_20375 6e6b7fc9eae2748166c580869467170c 907 Pfam PF05228 CHASE4 domain 60 215 1.5E-28 T 14-10-2018 IPR007892 CHASE4 DA442_13230 c647412ca66a0f590744687f2bdcc83b 386 ProSitePatterns PS00106 Galactokinase signature. 28 39 - T 14-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DA442_13230 c647412ca66a0f590744687f2bdcc83b 386 SUPERFAMILY SSF55060 205 382 1.58E-53 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily DA442_13230 c647412ca66a0f590744687f2bdcc83b 386 PIRSF PIRSF000530 1 385 6.9E-130 T 14-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DA442_13230 c647412ca66a0f590744687f2bdcc83b 386 Gene3D G3DSA:3.30.70.890 203 358 2.1E-133 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily DA442_13230 c647412ca66a0f590744687f2bdcc83b 386 Pfam PF10509 Galactokinase galactose-binding signature 11 59 5.9E-22 T 14-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DA442_13230 c647412ca66a0f590744687f2bdcc83b 386 Gene3D G3DSA:3.30.230.10 23 202 2.1E-133 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DA442_13230 c647412ca66a0f590744687f2bdcc83b 386 SUPERFAMILY SSF54211 2 204 6.45E-65 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DA442_13230 c647412ca66a0f590744687f2bdcc83b 386 PRINTS PR00959 Mevalonate kinase family signature 26 50 4.3E-44 T 14-10-2018 DA442_13230 c647412ca66a0f590744687f2bdcc83b 386 PRINTS PR00959 Mevalonate kinase family signature 120 142 4.3E-44 T 14-10-2018 DA442_13230 c647412ca66a0f590744687f2bdcc83b 386 PRINTS PR00959 Mevalonate kinase family signature 329 346 4.3E-44 T 14-10-2018 DA442_13230 c647412ca66a0f590744687f2bdcc83b 386 PRINTS PR00959 Mevalonate kinase family signature 163 182 4.3E-44 T 14-10-2018 DA442_13230 c647412ca66a0f590744687f2bdcc83b 386 PRINTS PR00473 Galactokinase signature 93 104 9.4E-30 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DA442_13230 c647412ca66a0f590744687f2bdcc83b 386 PRINTS PR00473 Galactokinase signature 264 278 9.4E-30 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DA442_13230 c647412ca66a0f590744687f2bdcc83b 386 PRINTS PR00473 Galactokinase signature 113 131 9.4E-30 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DA442_13230 c647412ca66a0f590744687f2bdcc83b 386 PRINTS PR00473 Galactokinase signature 28 46 9.4E-30 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DA442_13230 c647412ca66a0f590744687f2bdcc83b 386 TIGRFAM TIGR00131 gal_kin: galactokinase 6 381 3.0E-147 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DA442_13230 c647412ca66a0f590744687f2bdcc83b 386 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 122 133 - T 14-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 DA442_13230 c647412ca66a0f590744687f2bdcc83b 386 Pfam PF08544 GHMP kinases C terminal 280 361 2.7E-11 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain DA442_13230 c647412ca66a0f590744687f2bdcc83b 386 Hamap MF_00246 Galactokinase [galK]. 26 382 44.096 T 14-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DA442_13230 c647412ca66a0f590744687f2bdcc83b 386 Pfam PF00288 GHMP kinases N terminal domain 115 181 7.9E-11 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 DA442_16575 97cda421c0e4a09f168303e1508af077 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 9.7E-47 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_16575 97cda421c0e4a09f168303e1508af077 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 122 9.1E-30 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_16575 97cda421c0e4a09f168303e1508af077 122 Gene3D G3DSA:3.30.1390.10 52 122 8.8E-31 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DA442_16575 97cda421c0e4a09f168303e1508af077 122 SUPERFAMILY SSF54736 51 122 1.46E-24 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DA442_16575 97cda421c0e4a09f168303e1508af077 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 122 24.522 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_16575 97cda421c0e4a09f168303e1508af077 122 SUPERFAMILY SSF48300 4 58 8.76E-16 T 14-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_16575 97cda421c0e4a09f168303e1508af077 122 Gene3D G3DSA:1.20.5.710 2 51 4.2E-23 T 14-10-2018 DA442_16575 97cda421c0e4a09f168303e1508af077 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 49 3.0E-16 T 14-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_16575 97cda421c0e4a09f168303e1508af077 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 57 122 1.0E-28 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_15745 699591b434c362d7ce9072621666aaeb 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 1.4E-42 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_15745 699591b434c362d7ce9072621666aaeb 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.818 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_15745 699591b434c362d7ce9072621666aaeb 124 PIRSF PIRSF002133 1 124 3.0E-54 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_15745 699591b434c362d7ce9072621666aaeb 124 Gene3D G3DSA:2.40.50.140 1 124 6.1E-64 T 14-10-2018 DA442_15745 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 2.1E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_15745 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 2.1E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_15745 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 2.1E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_15745 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 2.1E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_15745 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 2.1E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_15745 699591b434c362d7ce9072621666aaeb 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 2.1E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_15745 699591b434c362d7ce9072621666aaeb 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 8.5E-71 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_15745 699591b434c362d7ce9072621666aaeb 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_15745 699591b434c362d7ce9072621666aaeb 124 SUPERFAMILY SSF50249 3 123 2.83E-52 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_25740 3e9b301bb7a0a3d6b4794e9585bcd511 623 SUPERFAMILY SSF103190 51 184 2.88E-18 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily DA442_25740 3e9b301bb7a0a3d6b4794e9585bcd511 623 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 409 589 7.4E-43 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_25740 3e9b301bb7a0a3d6b4794e9585bcd511 623 Gene3D G3DSA:3.30.450.20 49 264 9.8E-70 T 14-10-2018 DA442_25740 3e9b301bb7a0a3d6b4794e9585bcd511 623 Gene3D G3DSA:1.10.287.950 291 623 3.0E-71 T 14-10-2018 DA442_25740 3e9b301bb7a0a3d6b4794e9585bcd511 623 SMART SM00304 292 346 1.9E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_25740 3e9b301bb7a0a3d6b4794e9585bcd511 623 SMART SM00283 361 622 1.5E-72 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_25740 3e9b301bb7a0a3d6b4794e9585bcd511 623 Gene3D G3DSA:3.30.450.20 62 173 9.8E-70 T 14-10-2018 DA442_25740 3e9b301bb7a0a3d6b4794e9585bcd511 623 Pfam PF02743 Cache domain 33 254 2.7E-32 T 14-10-2018 IPR033479 Double Cache domain 1 DA442_25740 3e9b301bb7a0a3d6b4794e9585bcd511 623 SUPERFAMILY SSF58104 314 623 1.22E-75 T 14-10-2018 DA442_25740 3e9b301bb7a0a3d6b4794e9585bcd511 623 Pfam PF00672 HAMP domain 292 343 8.0E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_21095 cb542bb7300b1269d4053492e1f309a9 440 SMART SM00304 168 221 1.3E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_21095 cb542bb7300b1269d4053492e1f309a9 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 393 1.2E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_21095 cb542bb7300b1269d4053492e1f309a9 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 437 1.2E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_21095 cb542bb7300b1269d4053492e1f309a9 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 1.2E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_21095 cb542bb7300b1269d4053492e1f309a9 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 365 379 1.2E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_21095 cb542bb7300b1269d4053492e1f309a9 440 Gene3D G3DSA:1.10.287.130 172 287 2.0E-19 T 14-10-2018 DA442_21095 cb542bb7300b1269d4053492e1f309a9 440 SUPERFAMILY SSF55874 323 437 1.02E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_21095 cb542bb7300b1269d4053492e1f309a9 440 SMART SM00387 330 440 3.0E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_21095 cb542bb7300b1269d4053492e1f309a9 440 SMART SM00388 222 286 1.7E-4 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_21095 cb542bb7300b1269d4053492e1f309a9 440 SUPERFAMILY SSF47384 205 284 6.08E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DA442_21095 cb542bb7300b1269d4053492e1f309a9 440 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 338 438 2.0E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_21095 cb542bb7300b1269d4053492e1f309a9 440 Gene3D G3DSA:3.30.565.10 306 440 7.3E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_21095 cb542bb7300b1269d4053492e1f309a9 440 Pfam PF00512 His Kinase A (phospho-acceptor) domain 226 283 3.6E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_01810 818c00d1b3a77c4062e2f04a511d5735 126 SUPERFAMILY SSF110069 5 126 1.06E-46 T 14-10-2018 IPR036767 ApaG domain superfamily DA442_01810 818c00d1b3a77c4062e2f04a511d5735 126 Hamap MF_00791 Protein ApaG [apaG]. 1 126 31.563 T 14-10-2018 IPR023065 Uncharacterised protein family ApaG DA442_01810 818c00d1b3a77c4062e2f04a511d5735 126 Pfam PF04379 ApaG domain 18 103 1.7E-33 T 14-10-2018 IPR007474 ApaG domain DA442_01810 818c00d1b3a77c4062e2f04a511d5735 126 Gene3D G3DSA:2.60.40.1470 1 126 6.1E-47 T 14-10-2018 IPR036767 ApaG domain superfamily DA442_16530 c3267e943eebf978347c821ab26c8faa 307 Gene3D G3DSA:3.40.50.720 91 276 9.9E-97 T 14-10-2018 DA442_16530 c3267e943eebf978347c821ab26c8faa 307 SUPERFAMILY SSF51735 93 273 2.05E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_16530 c3267e943eebf978347c821ab26c8faa 307 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 99 272 9.3E-50 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 DA442_16530 c3267e943eebf978347c821ab26c8faa 307 SUPERFAMILY SSF52283 25 120 2.32E-7 T 14-10-2018 DA442_16530 c3267e943eebf978347c821ab26c8faa 307 Gene3D G3DSA:3.40.50.720 32 299 9.9E-97 T 14-10-2018 DA442_04290 770c99463c11d8f5abae93a0553e0221 92 SUPERFAMILY SSF52833 5 87 2.46E-29 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_04290 770c99463c11d8f5abae93a0553e0221 92 Gene3D G3DSA:3.40.30.10 2 92 2.2E-39 T 14-10-2018 DA442_04290 770c99463c11d8f5abae93a0553e0221 92 Pfam PF10262 Rdx family 6 78 1.3E-31 T 14-10-2018 IPR011893 Selenoprotein, Rdx-type DA442_04290 770c99463c11d8f5abae93a0553e0221 92 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 6 77 1.0E-24 T 14-10-2018 IPR011893 Selenoprotein, Rdx-type DA442_08930 40b61ca3bae2ff83a9d412caa3858c02 501 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 11 192 5.9E-65 T 14-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DA442_08930 40b61ca3bae2ff83a9d412caa3858c02 501 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 7 487 1.6E-203 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DA442_08930 40b61ca3bae2ff83a9d412caa3858c02 501 PIRSF PIRSF000110 2 490 1.3E-178 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DA442_08930 40b61ca3bae2ff83a9d412caa3858c02 501 SUPERFAMILY SSF55347 182 490 8.17E-113 T 14-10-2018 DA442_08930 40b61ca3bae2ff83a9d412caa3858c02 501 SUPERFAMILY SSF51735 4 195 1.71E-62 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_08930 40b61ca3bae2ff83a9d412caa3858c02 501 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 194 487 6.3E-115 T 14-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DA442_08930 40b61ca3bae2ff83a9d412caa3858c02 501 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 182 188 - T 14-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DA442_08930 40b61ca3bae2ff83a9d412caa3858c02 501 Gene3D G3DSA:3.40.50.720 5 180 2.0E-60 T 14-10-2018 DA442_08930 40b61ca3bae2ff83a9d412caa3858c02 501 Gene3D G3DSA:3.30.360.10 181 489 8.1E-125 T 14-10-2018 DA442_08930 40b61ca3bae2ff83a9d412caa3858c02 501 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 7 488 85.253 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DA442_08930 40b61ca3bae2ff83a9d412caa3858c02 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 148 161 1.0E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DA442_08930 40b61ca3bae2ff83a9d412caa3858c02 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 224 241 1.0E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DA442_08930 40b61ca3bae2ff83a9d412caa3858c02 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 333 359 1.0E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DA442_08930 40b61ca3bae2ff83a9d412caa3858c02 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 172 200 1.0E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DA442_08930 40b61ca3bae2ff83a9d412caa3858c02 501 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 242 258 1.0E-49 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DA442_00760 cf8e5ba363624f05b0b3b0d8c7e83d47 194 Pfam PF01106 NifU-like domain 113 180 8.7E-19 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 DA442_00760 cf8e5ba363624f05b0b3b0d8c7e83d47 194 SUPERFAMILY SSF89360 3 99 4.71E-22 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 DA442_00760 cf8e5ba363624f05b0b3b0d8c7e83d47 194 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 121 180 1.0E-27 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 DA442_00760 cf8e5ba363624f05b0b3b0d8c7e83d47 194 SUPERFAMILY SSF117916 97 187 6.98E-22 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily DA442_00760 cf8e5ba363624f05b0b3b0d8c7e83d47 194 Pfam PF01521 Iron-sulphur cluster biosynthesis 3 100 5.9E-13 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 DA442_00760 cf8e5ba363624f05b0b3b0d8c7e83d47 194 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 4 194 2.4E-95 T 14-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 DA442_00760 cf8e5ba363624f05b0b3b0d8c7e83d47 194 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 3 194 44.284 T 14-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 DA442_00760 cf8e5ba363624f05b0b3b0d8c7e83d47 194 Gene3D G3DSA:3.30.300.130 103 191 1.5E-18 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily DA442_00760 cf8e5ba363624f05b0b3b0d8c7e83d47 194 Gene3D G3DSA:2.60.300.12 2 100 3.1E-14 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 DA442_02765 42bbb553a7f72323ecbe1513192beb2e 494 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 328 437 1.9E-21 T 14-10-2018 IPR025299 CstA, C-terminal domain DA442_02765 42bbb553a7f72323ecbe1513192beb2e 494 Pfam PF02554 Carbon starvation protein CstA 4 144 5.4E-33 T 14-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 DA442_06930 ccc91433075fd160b49d5e6abb2d6401 376 Gene3D G3DSA:2.60.120.10 67 167 1.1E-11 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DA442_06930 ccc91433075fd160b49d5e6abb2d6401 376 SUPERFAMILY SSF51182 78 374 5.76E-91 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DA442_06930 ccc91433075fd160b49d5e6abb2d6401 376 Pfam PF04209 homogentisate 1,2-dioxygenase 87 374 1.0E-21 T 14-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 DA442_13210 35b523f559c52b441d9c6f61661ec3fb 462 Gene3D G3DSA:1.20.1250.20 7 209 3.4E-9 T 14-10-2018 DA442_13210 35b523f559c52b441d9c6f61661ec3fb 462 SUPERFAMILY SSF103473 10 425 6.19E-27 T 14-10-2018 IPR036259 MFS transporter superfamily DA442_13210 35b523f559c52b441d9c6f61661ec3fb 462 Pfam PF13347 MFS/sugar transport protein 20 430 1.0E-79 T 14-10-2018 DA442_13210 35b523f559c52b441d9c6f61661ec3fb 462 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 18 442 4.0E-107 T 14-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 DA442_13210 35b523f559c52b441d9c6f61661ec3fb 462 Gene3D G3DSA:1.20.1250.20 221 430 8.2E-11 T 14-10-2018 DA442_01600 55b3255bc5cbd7397ab87761b449ce96 302 Gene3D G3DSA:3.40.50.620 7 212 5.0E-66 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DA442_01600 55b3255bc5cbd7397ab87761b449ce96 302 SUPERFAMILY SSF52402 6 209 2.19E-74 T 14-10-2018 DA442_01600 55b3255bc5cbd7397ab87761b449ce96 302 PIRSF PIRSF002936 1 302 4.1E-156 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 DA442_01600 55b3255bc5cbd7397ab87761b449ce96 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 58.245 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 DA442_01600 55b3255bc5cbd7397ab87761b449ce96 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 6.4E-164 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 DA442_01600 55b3255bc5cbd7397ab87761b449ce96 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 3.6E-64 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 DA442_06675 7f21c75b3e4f5e002579f5e1d5237c95 473 SUPERFAMILY SSF53098 7 471 4.28E-138 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DA442_06675 7f21c75b3e4f5e002579f5e1d5237c95 473 PIRSF PIRSF000977 1 473 1.5E-196 T 14-10-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 DA442_06675 7f21c75b3e4f5e002579f5e1d5237c95 473 Gene3D G3DSA:2.30.30.450 212 350 1.1E-55 T 14-10-2018 IPR038649 Exonuclease I, SH3-like domain superfamily DA442_06675 7f21c75b3e4f5e002579f5e1d5237c95 473 SMART SM00479 8 201 0.0046 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DA442_06675 7f21c75b3e4f5e002579f5e1d5237c95 473 Gene3D G3DSA:3.30.420.10 1 199 2.5E-72 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DA442_06675 7f21c75b3e4f5e002579f5e1d5237c95 473 Pfam PF00929 Exonuclease 11 190 3.1E-23 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DA442_06675 7f21c75b3e4f5e002579f5e1d5237c95 473 Gene3D G3DSA:1.20.1280.70 357 418 2.8E-29 T 14-10-2018 DA442_06675 7f21c75b3e4f5e002579f5e1d5237c95 473 Pfam PF08411 Exonuclease C-terminal 210 469 1.4E-103 T 14-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 DA442_19515 2cb8412fbdadf05cd8036d6094fbac70 483 SUPERFAMILY SSF52317 255 447 2.45E-36 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DA442_19515 2cb8412fbdadf05cd8036d6094fbac70 483 SUPERFAMILY SSF52540 6 241 1.37E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_19515 2cb8412fbdadf05cd8036d6094fbac70 483 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 483 198.71 T 14-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 DA442_19515 2cb8412fbdadf05cd8036d6094fbac70 483 Pfam PF13500 AAA domain 7 236 9.0E-23 T 14-10-2018 DA442_19515 2cb8412fbdadf05cd8036d6094fbac70 483 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 8 480 9.3E-157 T 14-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 DA442_19515 2cb8412fbdadf05cd8036d6094fbac70 483 Gene3D G3DSA:3.40.50.300 7 250 8.0E-57 T 14-10-2018 DA442_19515 2cb8412fbdadf05cd8036d6094fbac70 483 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 254 438 1.8E-59 T 14-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 DA442_19515 2cb8412fbdadf05cd8036d6094fbac70 483 Gene3D G3DSA:3.40.50.880 266 452 3.6E-20 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DA442_13300 5b6836a34518057d04a0d7df113b0dd6 483 Gene3D G3DSA:3.40.50.300 228 450 1.9E-69 T 14-10-2018 DA442_13300 5b6836a34518057d04a0d7df113b0dd6 483 Pfam PF00437 Type II/IV secretion system protein 132 409 1.7E-83 T 14-10-2018 IPR001482 Type II/IV secretion system protein DA442_13300 5b6836a34518057d04a0d7df113b0dd6 483 SUPERFAMILY SSF52540 112 453 2.25E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_13300 5b6836a34518057d04a0d7df113b0dd6 483 Gene3D G3DSA:3.30.450.380 12 227 3.0E-45 T 14-10-2018 DA442_22875 c1b75e1207901d6d0def6d88d1cbc7ae 228 Pfam PF01965 DJ-1/PfpI family 32 202 1.4E-18 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 DA442_22875 c1b75e1207901d6d0def6d88d1cbc7ae 228 Gene3D G3DSA:3.40.50.880 22 227 3.6E-47 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DA442_22875 c1b75e1207901d6d0def6d88d1cbc7ae 228 SUPERFAMILY SSF52317 32 222 9.82E-40 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DA442_05840 cad50155dcef87063f59ff73a04517af 318 SUPERFAMILY SSF52540 23 261 8.64E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_05840 cad50155dcef87063f59ff73a04517af 318 Gene3D G3DSA:3.40.50.300 9 193 1.2E-60 T 14-10-2018 DA442_05840 cad50155dcef87063f59ff73a04517af 318 Pfam PF02954 Bacterial regulatory protein, Fis family 274 314 4.3E-12 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DA442_05840 cad50155dcef87063f59ff73a04517af 318 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 109 124 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DA442_05840 cad50155dcef87063f59ff73a04517af 318 SUPERFAMILY SSF46689 233 317 2.82E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_05840 cad50155dcef87063f59ff73a04517af 318 Gene3D G3DSA:1.10.8.60 194 257 3.7E-21 T 14-10-2018 DA442_05840 cad50155dcef87063f59ff73a04517af 318 Pfam PF00158 Sigma-54 interaction domain 23 189 1.0E-65 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DA442_05840 cad50155dcef87063f59ff73a04517af 318 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 297 317 7.9E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DA442_05840 cad50155dcef87063f59ff73a04517af 318 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 280 297 7.9E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DA442_05840 cad50155dcef87063f59ff73a04517af 318 SMART SM00382 43 187 3.8E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_05840 cad50155dcef87063f59ff73a04517af 318 Gene3D G3DSA:1.10.10.60 266 318 6.4E-15 T 14-10-2018 DA442_05840 cad50155dcef87063f59ff73a04517af 318 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 233 242 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site DA442_20845 f468475bb1a6cc4ae8b6e9e9a0c240a4 409 TIGRFAM TIGR01882 peptidase-T: peptidase T 3 406 8.2E-162 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 DA442_20845 f468475bb1a6cc4ae8b6e9e9a0c240a4 409 Hamap MF_00550 Peptidase T [pepT]. 1 404 57.716 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 DA442_20845 f468475bb1a6cc4ae8b6e9e9a0c240a4 409 Gene3D G3DSA:3.40.630.10 4 400 4.8E-174 T 14-10-2018 DA442_20845 f468475bb1a6cc4ae8b6e9e9a0c240a4 409 PIRSF PIRSF037215 1 408 3.5E-183 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 DA442_20845 f468475bb1a6cc4ae8b6e9e9a0c240a4 409 SUPERFAMILY SSF55031 209 320 3.1E-39 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DA442_20845 f468475bb1a6cc4ae8b6e9e9a0c240a4 409 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 DA442_20845 f468475bb1a6cc4ae8b6e9e9a0c240a4 409 Gene3D G3DSA:3.30.70.360 209 319 4.8E-174 T 14-10-2018 DA442_20845 f468475bb1a6cc4ae8b6e9e9a0c240a4 409 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 177 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 DA442_20845 f468475bb1a6cc4ae8b6e9e9a0c240a4 409 Pfam PF07687 Peptidase dimerisation domain 206 303 2.2E-9 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain DA442_20845 f468475bb1a6cc4ae8b6e9e9a0c240a4 409 Pfam PF01546 Peptidase family M20/M25/M40 139 401 6.5E-12 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 DA442_20845 f468475bb1a6cc4ae8b6e9e9a0c240a4 409 SUPERFAMILY SSF53187 1 406 4.72E-81 T 14-10-2018 DA442_01490 e0ef5f4d50981bb362db9bc1c5633f3f 101 SUPERFAMILY SSF57716 2 101 7.06E-37 T 14-10-2018 DA442_01490 e0ef5f4d50981bb362db9bc1c5633f3f 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 14-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01490 e0ef5f4d50981bb362db9bc1c5633f3f 101 Pfam PF00253 Ribosomal protein S14p/S29e 48 100 1.3E-24 T 14-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_01490 e0ef5f4d50981bb362db9bc1c5633f3f 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.761 T 14-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid DA442_01490 e0ef5f4d50981bb362db9bc1c5633f3f 101 Gene3D G3DSA:4.10.830.10 43 101 5.7E-23 T 14-10-2018 DA442_17570 3af2db5a6926739e6113364d487c8f84 1041 SMART SM00487 283 495 5.6E-6 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DA442_17570 3af2db5a6926739e6113364d487c8f84 1041 Gene3D G3DSA:3.90.1570.50 64 188 9.9E-14 T 14-10-2018 DA442_17570 3af2db5a6926739e6113364d487c8f84 1041 Pfam PF04851 Type III restriction enzyme, res subunit 286 458 1.7E-21 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 DA442_17570 3af2db5a6926739e6113364d487c8f84 1041 Gene3D G3DSA:3.40.50.300 286 477 5.2E-37 T 14-10-2018 DA442_17570 3af2db5a6926739e6113364d487c8f84 1041 SUPERFAMILY SSF52540 258 510 2.35E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_17570 3af2db5a6926739e6113364d487c8f84 1041 Gene3D G3DSA:3.40.50.300 480 722 7.3E-32 T 14-10-2018 DA442_17570 3af2db5a6926739e6113364d487c8f84 1041 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 3 178 2.1E-23 T 14-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 DA442_17570 3af2db5a6926739e6113364d487c8f84 1041 SUPERFAMILY SSF52540 308 711 6.13E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_14275 0a14b66cd4d315cb1fbc86db27cdd20c 246 SUPERFAMILY SSF160950 1 245 2.35E-94 T 14-10-2018 IPR036268 ZapD domain superfamily DA442_14275 0a14b66cd4d315cb1fbc86db27cdd20c 246 Hamap MF_01092 Cell division protein ZapD [zapD]. 3 245 32.94 T 14-10-2018 IPR009777 Cell division protein ZapD DA442_14275 0a14b66cd4d315cb1fbc86db27cdd20c 246 Gene3D G3DSA:2.60.440.10 6 245 6.9E-90 T 14-10-2018 IPR027462 Z ring-associated protein D, C-terminal DA442_14275 0a14b66cd4d315cb1fbc86db27cdd20c 246 Pfam PF07072 Cell division protein 18 224 1.6E-76 T 14-10-2018 IPR009777 Cell division protein ZapD DA442_14275 0a14b66cd4d315cb1fbc86db27cdd20c 246 Gene3D G3DSA:1.10.3900.10 12 178 6.9E-90 T 14-10-2018 DA442_00005 ad5be436e8c39ea2deb69565d8b1fd60 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 166 186 1.7E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DA442_00005 ad5be436e8c39ea2deb69565d8b1fd60 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 198 212 1.7E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DA442_00005 ad5be436e8c39ea2deb69565d8b1fd60 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 230 244 1.7E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DA442_00005 ad5be436e8c39ea2deb69565d8b1fd60 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 264 291 1.7E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DA442_00005 ad5be436e8c39ea2deb69565d8b1fd60 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 426 445 1.7E-54 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DA442_00005 ad5be436e8c39ea2deb69565d8b1fd60 468 Gene3D G3DSA:3.30.300.180 2 114 7.7E-42 T 14-10-2018 IPR038454 DnaA, N-terminal domain superfamily DA442_00005 ad5be436e8c39ea2deb69565d8b1fd60 468 SMART SM00760 376 445 3.4E-45 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 DA442_00005 ad5be436e8c39ea2deb69565d8b1fd60 468 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 467 34.548 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 DA442_00005 ad5be436e8c39ea2deb69565d8b1fd60 468 Gene3D G3DSA:1.10.8.60 299 369 1.6E-24 T 14-10-2018 DA442_00005 ad5be436e8c39ea2deb69565d8b1fd60 468 Gene3D G3DSA:1.10.1750.10 375 468 1.5E-39 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 DA442_00005 ad5be436e8c39ea2deb69565d8b1fd60 468 ProSitePatterns PS01008 DnaA protein signature. 426 445 - T 14-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 DA442_00005 ad5be436e8c39ea2deb69565d8b1fd60 468 Pfam PF00308 Bacterial dnaA protein 134 350 3.4E-98 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA DA442_00005 ad5be436e8c39ea2deb69565d8b1fd60 468 Gene3D G3DSA:3.40.50.300 119 297 1.4E-49 T 14-10-2018 DA442_00005 ad5be436e8c39ea2deb69565d8b1fd60 468 Pfam PF11638 DnaA N-terminal domain 4 65 4.9E-20 T 14-10-2018 IPR024633 DnaA N-terminal domain DA442_00005 ad5be436e8c39ea2deb69565d8b1fd60 468 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 377 445 1.8E-32 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 DA442_00005 ad5be436e8c39ea2deb69565d8b1fd60 468 SUPERFAMILY SSF52540 133 344 1.07E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_00005 ad5be436e8c39ea2deb69565d8b1fd60 468 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 466 2.1E-187 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 DA442_00005 ad5be436e8c39ea2deb69565d8b1fd60 468 SUPERFAMILY SSF48295 364 467 3.66E-38 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 DA442_00005 ad5be436e8c39ea2deb69565d8b1fd60 468 SMART SM00382 165 378 4.6E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_23545 b98816752e0794a3f15ed9a280a20662 268 PRINTS PR01543 Arylamine N-acetyltransferase signature 22 45 1.9E-9 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 DA442_23545 b98816752e0794a3f15ed9a280a20662 268 PRINTS PR01543 Arylamine N-acetyltransferase signature 46 69 1.9E-9 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 DA442_23545 b98816752e0794a3f15ed9a280a20662 268 PRINTS PR01543 Arylamine N-acetyltransferase signature 100 125 1.9E-9 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 DA442_23545 b98816752e0794a3f15ed9a280a20662 268 SUPERFAMILY SSF54001 2 257 2.75E-74 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily DA442_23545 b98816752e0794a3f15ed9a280a20662 268 Pfam PF00797 N-acetyltransferase 22 258 1.7E-72 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 DA442_23545 b98816752e0794a3f15ed9a280a20662 268 Gene3D G3DSA:2.40.128.150 86 183 2.0E-71 T 14-10-2018 DA442_23545 b98816752e0794a3f15ed9a280a20662 268 Gene3D G3DSA:3.30.2140.10 6 253 2.0E-71 T 14-10-2018 DA442_15090 d2f350896b8f202cebf575c8aab58b32 153 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 1.7E-30 T 14-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal DA442_15090 d2f350896b8f202cebf575c8aab58b32 153 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 150 2.5E-19 T 14-10-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal DA442_15090 d2f350896b8f202cebf575c8aab58b32 153 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 2.0E-46 T 14-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal DA442_15090 d2f350896b8f202cebf575c8aab58b32 153 SUPERFAMILY SSF54893 2 100 7.72E-36 T 14-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily DA442_15090 d2f350896b8f202cebf575c8aab58b32 153 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 150 1.5E-61 T 14-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 DA442_15090 d2f350896b8f202cebf575c8aab58b32 153 SUPERFAMILY SSF57825 101 151 4.71E-16 T 14-10-2018 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily DA442_15090 d2f350896b8f202cebf575c8aab58b32 153 Gene3D G3DSA:2.30.30.20 101 153 1.9E-24 T 14-10-2018 DA442_15090 d2f350896b8f202cebf575c8aab58b32 153 Gene3D G3DSA:3.30.70.140 1 100 1.0E-36 T 14-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily DA442_15090 d2f350896b8f202cebf575c8aab58b32 153 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 33.949 T 14-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 DA442_03355 7a8cffd2c9328466202187db658b4df9 637 Pfam PF00012 Hsp70 protein 4 601 3.0E-262 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DA442_03355 7a8cffd2c9328466202187db658b4df9 637 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 4.5E-285 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 DA442_03355 7a8cffd2c9328466202187db658b4df9 637 SUPERFAMILY SSF53067 186 381 1.23E-65 T 14-10-2018 DA442_03355 7a8cffd2c9328466202187db658b4df9 637 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DA442_03355 7a8cffd2c9328466202187db658b4df9 637 PRINTS PR00301 70kDa heat shock protein signature 53 61 3.2E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DA442_03355 7a8cffd2c9328466202187db658b4df9 637 PRINTS PR00301 70kDa heat shock protein signature 197 207 3.2E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DA442_03355 7a8cffd2c9328466202187db658b4df9 637 PRINTS PR00301 70kDa heat shock protein signature 387 406 3.2E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DA442_03355 7a8cffd2c9328466202187db658b4df9 637 PRINTS PR00301 70kDa heat shock protein signature 31 43 3.2E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DA442_03355 7a8cffd2c9328466202187db658b4df9 637 PRINTS PR00301 70kDa heat shock protein signature 137 157 3.2E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DA442_03355 7a8cffd2c9328466202187db658b4df9 637 PRINTS PR00301 70kDa heat shock protein signature 3 16 3.2E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DA442_03355 7a8cffd2c9328466202187db658b4df9 637 PRINTS PR00301 70kDa heat shock protein signature 333 349 3.2E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DA442_03355 7a8cffd2c9328466202187db658b4df9 637 PRINTS PR00301 70kDa heat shock protein signature 364 384 3.2E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DA442_03355 7a8cffd2c9328466202187db658b4df9 637 PRINTS PR00301 70kDa heat shock protein signature 468 484 3.2E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DA442_03355 7a8cffd2c9328466202187db658b4df9 637 SUPERFAMILY SSF53067 1 182 1.17E-64 T 14-10-2018 DA442_03355 7a8cffd2c9328466202187db658b4df9 637 Gene3D G3DSA:1.20.1270.10 523 602 2.9E-27 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 DA442_03355 7a8cffd2c9328466202187db658b4df9 637 Gene3D G3DSA:3.30.420.40 179 365 9.0E-166 T 14-10-2018 DA442_03355 7a8cffd2c9328466202187db658b4df9 637 Gene3D G3DSA:2.60.34.10 382 522 6.5E-65 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 DA442_03355 7a8cffd2c9328466202187db658b4df9 637 Gene3D G3DSA:3.90.640.10 228 315 9.0E-166 T 14-10-2018 DA442_03355 7a8cffd2c9328466202187db658b4df9 637 SUPERFAMILY SSF100920 383 539 3.79E-60 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 DA442_03355 7a8cffd2c9328466202187db658b4df9 637 Gene3D G3DSA:3.30.420.40 5 378 9.0E-166 T 14-10-2018 DA442_03355 7a8cffd2c9328466202187db658b4df9 637 SUPERFAMILY SSF100934 534 607 3.84E-6 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 DA442_03355 7a8cffd2c9328466202187db658b4df9 637 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DA442_03355 7a8cffd2c9328466202187db658b4df9 637 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 336 350 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DA442_03355 7a8cffd2c9328466202187db658b4df9 637 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 632 36.238 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 DA442_02865 8b96d9c4977b5c3c2a160e69d892c2fc 242 Gene3D G3DSA:3.60.140.10 1 240 6.0E-87 T 14-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily DA442_02865 8b96d9c4977b5c3c2a160e69d892c2fc 242 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 19 239 1.3E-71 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase DA442_02865 8b96d9c4977b5c3c2a160e69d892c2fc 242 SUPERFAMILY SSF64438 4 241 3.85E-83 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic DA442_02865 8b96d9c4977b5c3c2a160e69d892c2fc 242 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 26 240 1.7E-59 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase DA442_02390 a7de67ba4b53bba386bfdb83f7ba9128 305 SUPERFAMILY SSF54211 134 278 2.5E-53 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DA442_02390 a7de67ba4b53bba386bfdb83f7ba9128 305 Gene3D G3DSA:3.30.1700.10 129 305 2.0E-71 T 14-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 DA442_02390 a7de67ba4b53bba386bfdb83f7ba9128 305 SUPERFAMILY SSF54211 3 125 3.57E-42 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DA442_02390 a7de67ba4b53bba386bfdb83f7ba9128 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 1.0E-108 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 DA442_02390 a7de67ba4b53bba386bfdb83f7ba9128 305 Gene3D G3DSA:3.30.230.20 1 128 2.0E-51 T 14-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 DA442_02390 a7de67ba4b53bba386bfdb83f7ba9128 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 298 5.9E-143 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 DA442_02390 a7de67ba4b53bba386bfdb83f7ba9128 305 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 46.819 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 DA442_03090 03c277817dbfb7402df89be03fb336cd 168 Pfam PF02082 Transcriptional regulator 1 83 9.6E-28 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type DA442_03090 03c277817dbfb7402df89be03fb336cd 168 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 14-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site DA442_03090 03c277817dbfb7402df89be03fb336cd 168 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 1 168 51.688 T 14-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 DA442_03090 03c277817dbfb7402df89be03fb336cd 168 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 4.2E-66 T 14-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 DA442_03090 03c277817dbfb7402df89be03fb336cd 168 Gene3D G3DSA:1.10.10.10 1 144 2.1E-54 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_03090 03c277817dbfb7402df89be03fb336cd 168 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 3.2E-47 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type DA442_03090 03c277817dbfb7402df89be03fb336cd 168 SUPERFAMILY SSF46785 2 133 1.61E-35 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_20960 aad2495cb41b7f61bd13472306d76674 207 Gene3D G3DSA:3.40.50.150 13 197 3.8E-19 T 14-10-2018 DA442_20960 aad2495cb41b7f61bd13472306d76674 207 Pfam PF13649 Methyltransferase domain 54 146 7.0E-13 T 14-10-2018 DA442_20960 aad2495cb41b7f61bd13472306d76674 207 SUPERFAMILY SSF53335 11 202 9.03E-20 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_06220 5267d1a01468442e05cbd5839b4699f1 219 SMART SM00448 1 112 1.7E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_06220 5267d1a01468442e05cbd5839b4699f1 219 SUPERFAMILY SSF52172 1 133 2.85E-36 T 14-10-2018 IPR011006 CheY-like superfamily DA442_06220 5267d1a01468442e05cbd5839b4699f1 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 4.2E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DA442_06220 5267d1a01468442e05cbd5839b4699f1 219 Gene3D G3DSA:3.40.50.2300 1 122 2.1E-36 T 14-10-2018 DA442_06220 5267d1a01468442e05cbd5839b4699f1 219 SMART SM00862 145 216 4.2E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DA442_06220 5267d1a01468442e05cbd5839b4699f1 219 Gene3D G3DSA:1.10.10.10 123 219 1.3E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_06220 5267d1a01468442e05cbd5839b4699f1 219 Pfam PF00072 Response regulator receiver domain 3 112 6.5E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_06220 5267d1a01468442e05cbd5839b4699f1 219 SUPERFAMILY SSF46894 119 217 7.65E-27 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DA442_24390 4bd1fed863ec2c514ddfa2d63b41e70d 271 SUPERFAMILY SSF56784 6 258 7.64E-54 T 14-10-2018 IPR036412 HAD-like superfamily DA442_24390 4bd1fed863ec2c514ddfa2d63b41e70d 271 Gene3D G3DSA:3.40.50.1000 8 271 4.2E-98 T 14-10-2018 IPR023214 HAD superfamily DA442_24390 4bd1fed863ec2c514ddfa2d63b41e70d 271 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 73 205 3.9E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DA442_24390 4bd1fed863ec2c514ddfa2d63b41e70d 271 Gene3D G3DSA:1.10.150.240 24 102 4.2E-98 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DA442_24390 4bd1fed863ec2c514ddfa2d63b41e70d 271 TIGRFAM TIGR01422 phosphonatase: phosphonoacetaldehyde hydrolase 6 258 9.7E-118 T 14-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 DA442_24390 4bd1fed863ec2c514ddfa2d63b41e70d 271 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 205 8.1E-9 T 14-10-2018 DA442_24390 4bd1fed863ec2c514ddfa2d63b41e70d 271 Hamap MF_01375 Phosphonoacetaldehyde hydrolase [phnX]. 1 271 141.208 T 14-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 DA442_15615 37537d54c1ef41e8873f523245d5fbdb 171 PIRSF PIRSF016481 1 171 2.6E-52 T 14-10-2018 IPR007446 Pilus assembly protein PilP DA442_15615 37537d54c1ef41e8873f523245d5fbdb 171 Pfam PF04351 Pilus assembly protein, PilP 25 170 8.1E-42 T 14-10-2018 IPR007446 Pilus assembly protein PilP DA442_15615 37537d54c1ef41e8873f523245d5fbdb 171 Gene3D G3DSA:2.30.30.830 91 171 1.1E-25 T 14-10-2018 DA442_09055 7dae934e260cf807b71ceab8395162c4 476 Pfam PF00512 His Kinase A (phospho-acceptor) domain 262 324 1.5E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_09055 7dae934e260cf807b71ceab8395162c4 476 Gene3D G3DSA:1.10.287.130 211 325 6.7E-20 T 14-10-2018 DA442_09055 7dae934e260cf807b71ceab8395162c4 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 433 8.3E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_09055 7dae934e260cf807b71ceab8395162c4 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 455 8.3E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_09055 7dae934e260cf807b71ceab8395162c4 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 419 8.3E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_09055 7dae934e260cf807b71ceab8395162c4 476 SUPERFAMILY SSF55874 315 475 9.17E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_09055 7dae934e260cf807b71ceab8395162c4 476 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 368 474 8.0E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_09055 7dae934e260cf807b71ceab8395162c4 476 SMART SM00387 368 476 1.4E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_09055 7dae934e260cf807b71ceab8395162c4 476 Gene3D G3DSA:3.30.565.10 329 475 2.4E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_09055 7dae934e260cf807b71ceab8395162c4 476 SMART SM00388 260 325 5.0E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_09055 7dae934e260cf807b71ceab8395162c4 476 SUPERFAMILY SSF47384 243 324 1.96E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DA442_09055 7dae934e260cf807b71ceab8395162c4 476 Pfam PF08521 Two-component sensor kinase N-terminal 29 183 5.9E-8 T 14-10-2018 IPR013727 Two-component sensor kinase, N-terminal DA442_19865 49a5317477e8d98a309067ed805a5b07 300 Pfam PF03466 LysR substrate binding domain 89 292 3.1E-41 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_19865 49a5317477e8d98a309067ed805a5b07 300 SUPERFAMILY SSF53850 89 295 3.57E-43 T 14-10-2018 DA442_19865 49a5317477e8d98a309067ed805a5b07 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_19865 49a5317477e8d98a309067ed805a5b07 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_19865 49a5317477e8d98a309067ed805a5b07 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_19865 49a5317477e8d98a309067ed805a5b07 300 SUPERFAMILY SSF46785 3 87 7.37E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_19865 49a5317477e8d98a309067ed805a5b07 300 Gene3D G3DSA:3.40.190.10 91 289 3.5E-65 T 14-10-2018 DA442_19865 49a5317477e8d98a309067ed805a5b07 300 Gene3D G3DSA:1.10.10.10 3 86 5.8E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_19865 49a5317477e8d98a309067ed805a5b07 300 Gene3D G3DSA:3.40.190.10 163 264 3.5E-65 T 14-10-2018 DA442_19865 49a5317477e8d98a309067ed805a5b07 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 63 9.9E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_02285 53ad19563696a271fb54b0333fe7f4df 160 Pfam PF04386 Stringent starvation protein B 9 160 3.1E-43 T 14-10-2018 IPR007481 Stringent starvation protein B DA442_02285 53ad19563696a271fb54b0333fe7f4df 160 SUPERFAMILY SSF101738 4 121 1.57E-50 T 14-10-2018 IPR036760 SspB-like superfamily DA442_02285 53ad19563696a271fb54b0333fe7f4df 160 Gene3D G3DSA:2.30.30.220 3 146 1.5E-53 T 14-10-2018 IPR036760 SspB-like superfamily DA442_02285 53ad19563696a271fb54b0333fe7f4df 160 PIRSF PIRSF005276 3 160 3.5E-64 T 14-10-2018 IPR007481 Stringent starvation protein B DA442_20995 7abdfc5637a5ce71ea8a2d7197be340c 858 SMART SM00388 481 546 2.1E-21 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_20995 7abdfc5637a5ce71ea8a2d7197be340c 858 Pfam PF09308 LuxQ, periplasmic 40 277 2.1E-101 T 14-10-2018 IPR015387 LuxQ, periplasmic GO:0004673|GO:0016791 DA442_20995 7abdfc5637a5ce71ea8a2d7197be340c 858 SUPERFAMILY SSF103190 51 269 5.65E-71 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily DA442_20995 7abdfc5637a5ce71ea8a2d7197be340c 858 SUPERFAMILY SSF55785 347 459 2.12E-5 T 14-10-2018 IPR035965 PAS domain superfamily DA442_20995 7abdfc5637a5ce71ea8a2d7197be340c 858 Gene3D G3DSA:3.30.450.220 50 206 1.6E-64 T 14-10-2018 DA442_20995 7abdfc5637a5ce71ea8a2d7197be340c 858 Gene3D G3DSA:3.30.450.20 343 471 1.7E-10 T 14-10-2018 DA442_20995 7abdfc5637a5ce71ea8a2d7197be340c 858 SUPERFAMILY SSF55874 535 708 4.58E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_20995 7abdfc5637a5ce71ea8a2d7197be340c 858 SUPERFAMILY SSF47384 469 547 3.53E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DA442_20995 7abdfc5637a5ce71ea8a2d7197be340c 858 Gene3D G3DSA:2.20.20.100 207 270 7.4E-37 T 14-10-2018 DA442_20995 7abdfc5637a5ce71ea8a2d7197be340c 858 SMART SM00448 734 846 4.8E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_20995 7abdfc5637a5ce71ea8a2d7197be340c 858 SMART SM00387 593 710 6.0E-38 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_20995 7abdfc5637a5ce71ea8a2d7197be340c 858 Gene3D G3DSA:3.40.50.2300 720 854 3.6E-32 T 14-10-2018 DA442_20995 7abdfc5637a5ce71ea8a2d7197be340c 858 SUPERFAMILY SSF52172 733 853 8.82E-30 T 14-10-2018 IPR011006 CheY-like superfamily DA442_20995 7abdfc5637a5ce71ea8a2d7197be340c 858 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 593 708 2.0E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_20995 7abdfc5637a5ce71ea8a2d7197be340c 858 Pfam PF00512 His Kinase A (phospho-acceptor) domain 482 546 1.5E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_20995 7abdfc5637a5ce71ea8a2d7197be340c 858 Pfam PF00072 Response regulator receiver domain 736 845 1.2E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_20995 7abdfc5637a5ce71ea8a2d7197be340c 858 Gene3D G3DSA:1.10.287.130 472 546 2.0E-22 T 14-10-2018 DA442_20995 7abdfc5637a5ce71ea8a2d7197be340c 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 653 663 2.8E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_20995 7abdfc5637a5ce71ea8a2d7197be340c 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 670 688 2.8E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_20995 7abdfc5637a5ce71ea8a2d7197be340c 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 694 707 2.8E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_20995 7abdfc5637a5ce71ea8a2d7197be340c 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 635 649 2.8E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_20995 7abdfc5637a5ce71ea8a2d7197be340c 858 Gene3D G3DSA:3.30.565.10 547 714 5.1E-47 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_20995 7abdfc5637a5ce71ea8a2d7197be340c 858 ProDom PD142495 MEMBRANE SENSOR TRANSFERASE LUXQ 2.7.3.- TRANSMEMBRANE INNER PHOSPHORYLATION SENSORY AUTOINDUCER 8 360 0.0 T 14-10-2018 IPR015387 LuxQ, periplasmic GO:0004673|GO:0016791 DA442_01605 e83f318598ff96a41e2839f641fa383e 476 Gene3D G3DSA:2.40.30.10 331 434 2.4E-29 T 14-10-2018 DA442_01605 e83f318598ff96a41e2839f641fa383e 476 SUPERFAMILY SSF50465 332 434 4.12E-30 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DA442_01605 e83f318598ff96a41e2839f641fa383e 476 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 33 212 2.3E-12 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DA442_01605 e83f318598ff96a41e2839f641fa383e 476 Gene3D G3DSA:3.40.50.300 6 239 6.7E-71 T 14-10-2018 DA442_01605 e83f318598ff96a41e2839f641fa383e 476 Pfam PF00009 Elongation factor Tu GTP binding domain 26 234 1.6E-44 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_01605 e83f318598ff96a41e2839f641fa383e 476 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 82 97 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site DA442_01605 e83f318598ff96a41e2839f641fa383e 476 Gene3D G3DSA:2.40.30.10 242 327 1.3E-26 T 14-10-2018 DA442_01605 e83f318598ff96a41e2839f641fa383e 476 PRINTS PR00315 GTP-binding elongation factor signature 125 136 5.9E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_01605 e83f318598ff96a41e2839f641fa383e 476 PRINTS PR00315 GTP-binding elongation factor signature 109 119 5.9E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_01605 e83f318598ff96a41e2839f641fa383e 476 PRINTS PR00315 GTP-binding elongation factor signature 89 97 5.9E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_01605 e83f318598ff96a41e2839f641fa383e 476 PRINTS PR00315 GTP-binding elongation factor signature 162 171 5.9E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_01605 e83f318598ff96a41e2839f641fa383e 476 PRINTS PR00315 GTP-binding elongation factor signature 28 41 5.9E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_01605 e83f318598ff96a41e2839f641fa383e 476 SUPERFAMILY SSF50447 243 324 1.72E-23 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DA442_01605 e83f318598ff96a41e2839f641fa383e 476 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 27 433 2.3E-197 T 14-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 DA442_01605 e83f318598ff96a41e2839f641fa383e 476 SUPERFAMILY SSF52540 18 235 1.6E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_01605 e83f318598ff96a41e2839f641fa383e 476 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 18 474 53.679 T 14-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 DA442_11740 a3531bd1569b624a5103066a55e4199c 112 Gene3D G3DSA:1.20.120.160 1 112 6.9E-27 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 DA442_11740 a3531bd1569b624a5103066a55e4199c 112 SUPERFAMILY SSF47226 2 110 2.88E-23 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 DA442_11740 a3531bd1569b624a5103066a55e4199c 112 Pfam PF01627 Hpt domain 24 102 8.5E-12 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 DA442_02985 f92553bd4a3c438164a91c43a31b311a 272 SUPERFAMILY SSF52540 22 258 6.98E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_02985 f92553bd4a3c438164a91c43a31b311a 272 SMART SM00382 50 252 1.6E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_02985 f92553bd4a3c438164a91c43a31b311a 272 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_02985 f92553bd4a3c438164a91c43a31b311a 272 Pfam PF00005 ABC transporter 41 197 2.1E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_02985 f92553bd4a3c438164a91c43a31b311a 272 Gene3D G3DSA:3.40.50.300 21 269 1.0E-65 T 14-10-2018 DA442_02985 f92553bd4a3c438164a91c43a31b311a 272 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 26 272 5.2E-124 T 14-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 DA442_06790 09f31a050470e00bfeac2a17a94fb471 375 Gene3D G3DSA:3.40.50.150 89 364 1.8E-79 T 14-10-2018 DA442_06790 09f31a050470e00bfeac2a17a94fb471 375 Pfam PF05971 Protein of unknown function (DUF890) 55 364 1.5E-129 T 14-10-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 DA442_06790 09f31a050470e00bfeac2a17a94fb471 375 SUPERFAMILY SSF53335 94 363 3.81E-33 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_06790 09f31a050470e00bfeac2a17a94fb471 375 PIRSF PIRSF029038 45 375 1.2E-162 T 14-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 DA442_06790 09f31a050470e00bfeac2a17a94fb471 375 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 56 366 54.285 T 14-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 DA442_04515 b91a754f0aab4bd9c005aa6a4de88861 199 Pfam PF06185 YecM protein 14 196 1.7E-67 T 14-10-2018 IPR010393 Protein of unknown function DUF991 DA442_04515 b91a754f0aab4bd9c005aa6a4de88861 199 SUPERFAMILY SSF54593 2 197 2.45E-68 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DA442_04515 b91a754f0aab4bd9c005aa6a4de88861 199 Gene3D G3DSA:3.10.180.10 6 199 1.1E-61 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DA442_09530 190b195f0b7839a26cc9abd50080c1bd 29 Pfam PF11665 Protein of unknown function (DUF3265) 2 29 2.5E-14 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_09415 190b195f0b7839a26cc9abd50080c1bd 29 Pfam PF11665 Protein of unknown function (DUF3265) 2 29 2.5E-14 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_10315 190b195f0b7839a26cc9abd50080c1bd 29 Pfam PF11665 Protein of unknown function (DUF3265) 2 29 2.5E-14 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_01800 a1a5b9428cb95191cf903b3091f4eff6 167 Gene3D G3DSA:3.40.430.10 1 167 1.9E-55 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 DA442_01800 a1a5b9428cb95191cf903b3091f4eff6 167 PRINTS PR00070 Dihydrofolate reductase signature 21 31 1.7E-14 T 14-10-2018 DA442_01800 a1a5b9428cb95191cf903b3091f4eff6 167 PRINTS PR00070 Dihydrofolate reductase signature 35 43 1.7E-14 T 14-10-2018 DA442_01800 a1a5b9428cb95191cf903b3091f4eff6 167 PRINTS PR00070 Dihydrofolate reductase signature 48 59 1.7E-14 T 14-10-2018 DA442_01800 a1a5b9428cb95191cf903b3091f4eff6 167 PRINTS PR00070 Dihydrofolate reductase signature 99 113 1.7E-14 T 14-10-2018 DA442_01800 a1a5b9428cb95191cf903b3091f4eff6 167 Pfam PF00186 Dihydrofolate reductase 1 166 8.7E-56 T 14-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 DA442_01800 a1a5b9428cb95191cf903b3091f4eff6 167 SUPERFAMILY SSF53597 1 166 1.96E-52 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 DA442_01800 a1a5b9428cb95191cf903b3091f4eff6 167 PIRSF PIRSF000194 1 167 6.6E-55 T 14-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 DA442_01050 56977ae2a24eb973cbcfd6c99677ece4 167 Gene3D G3DSA:3.40.50.620 8 167 6.2E-55 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DA442_01050 56977ae2a24eb973cbcfd6c99677ece4 167 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 10 67 1.8E-18 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DA442_01050 56977ae2a24eb973cbcfd6c99677ece4 167 Pfam PF01467 Cytidylyltransferase-like 11 139 3.4E-19 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DA442_01050 56977ae2a24eb973cbcfd6c99677ece4 167 SUPERFAMILY SSF52374 8 162 1.9E-44 T 14-10-2018 DA442_01050 56977ae2a24eb973cbcfd6c99677ece4 167 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 17 100 0.001 T 14-10-2018 DA442_01050 56977ae2a24eb973cbcfd6c99677ece4 167 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 26 47 1.0E-47 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DA442_01050 56977ae2a24eb973cbcfd6c99677ece4 167 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 91 107 1.0E-47 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DA442_01050 56977ae2a24eb973cbcfd6c99677ece4 167 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 118 140 1.0E-47 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DA442_01050 56977ae2a24eb973cbcfd6c99677ece4 167 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 8 26 1.0E-47 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DA442_01050 56977ae2a24eb973cbcfd6c99677ece4 167 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 55 79 1.0E-47 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DA442_01050 56977ae2a24eb973cbcfd6c99677ece4 167 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 10 162 6.9E-59 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DA442_01050 56977ae2a24eb973cbcfd6c99677ece4 167 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 8 164 34.649 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DA442_00585 001ebd324a2de33e74a10f56d4c9625d 224 SUPERFAMILY SSF53335 59 211 1.6E-19 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_00585 001ebd324a2de33e74a10f56d4c9625d 224 Pfam PF13489 Methyltransferase domain 75 204 9.9E-18 T 14-10-2018 DA442_00585 001ebd324a2de33e74a10f56d4c9625d 224 Gene3D G3DSA:3.40.50.150 54 215 3.7E-13 T 14-10-2018 DA442_16265 2440d6b700577b954c5d2a003e4bbe0b 483 SUPERFAMILY SSF48557 14 467 6.77E-145 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 DA442_16265 2440d6b700577b954c5d2a003e4bbe0b 483 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 16 482 3.0E-253 T 14-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 DA442_16265 2440d6b700577b954c5d2a003e4bbe0b 483 PRINTS PR00149 Fumarate lyase superfamily signature 193 211 4.2E-26 T 14-10-2018 IPR000362 Fumarate lyase family DA442_16265 2440d6b700577b954c5d2a003e4bbe0b 483 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 4.2E-26 T 14-10-2018 IPR000362 Fumarate lyase family DA442_16265 2440d6b700577b954c5d2a003e4bbe0b 483 PRINTS PR00149 Fumarate lyase superfamily signature 330 346 4.2E-26 T 14-10-2018 IPR000362 Fumarate lyase family DA442_16265 2440d6b700577b954c5d2a003e4bbe0b 483 PRINTS PR00149 Fumarate lyase superfamily signature 284 311 4.2E-26 T 14-10-2018 IPR000362 Fumarate lyase family DA442_16265 2440d6b700577b954c5d2a003e4bbe0b 483 Gene3D G3DSA:1.20.200.10 153 420 1.7E-113 T 14-10-2018 DA442_16265 2440d6b700577b954c5d2a003e4bbe0b 483 Pfam PF10415 Fumarase C C-terminus 421 473 7.9E-18 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DA442_16265 2440d6b700577b954c5d2a003e4bbe0b 483 Gene3D G3DSA:1.10.275.10 16 152 7.3E-59 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal DA442_16265 2440d6b700577b954c5d2a003e4bbe0b 483 Gene3D G3DSA:1.10.40.30 421 470 3.9E-28 T 14-10-2018 DA442_16265 2440d6b700577b954c5d2a003e4bbe0b 483 Pfam PF00206 Lyase 23 355 1.7E-102 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal DA442_16265 2440d6b700577b954c5d2a003e4bbe0b 483 ProSitePatterns PS00163 Fumarate lyases signature. 330 339 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 DA442_23595 07f61f3bb28e98cdda1d0f87f0c3a0ab 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 257 270 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DA442_23595 07f61f3bb28e98cdda1d0f87f0c3a0ab 309 Gene3D G3DSA:3.40.1190.20 4 308 3.6E-79 T 14-10-2018 IPR029056 Ribokinase-like DA442_23595 07f61f3bb28e98cdda1d0f87f0c3a0ab 309 SUPERFAMILY SSF53613 6 301 8.73E-73 T 14-10-2018 IPR029056 Ribokinase-like DA442_23595 07f61f3bb28e98cdda1d0f87f0c3a0ab 309 Pfam PF00294 pfkB family carbohydrate kinase 7 304 6.0E-61 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB DA442_22425 8be38c0337a5d548ea8f86079456c4af 373 Gene3D G3DSA:3.10.560.10 51 337 4.3E-118 T 14-10-2018 DA442_22425 8be38c0337a5d548ea8f86079456c4af 373 Pfam PF10531 SLBB domain 253 302 2.0E-6 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DA442_22425 8be38c0337a5d548ea8f86079456c4af 373 Pfam PF10531 SLBB domain 171 215 1.9E-10 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DA442_22425 8be38c0337a5d548ea8f86079456c4af 373 Gene3D G3DSA:3.10.560.10 63 251 4.3E-118 T 14-10-2018 DA442_22425 8be38c0337a5d548ea8f86079456c4af 373 Pfam PF02563 Polysaccharide biosynthesis/export protein 79 162 6.3E-26 T 14-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 DA442_22425 8be38c0337a5d548ea8f86079456c4af 373 Gene3D G3DSA:1.20.5.70 340 373 3.8E-19 T 14-10-2018 DA442_22425 8be38c0337a5d548ea8f86079456c4af 373 Gene3D G3DSA:3.30.1950.10 85 166 4.3E-118 T 14-10-2018 DA442_17755 8432fa85b82ebe29d71889e8c2df841e 298 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 10 279 3.0E-27 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 DA442_17755 8432fa85b82ebe29d71889e8c2df841e 298 Pfam PF01545 Cation efflux family 13 214 1.9E-32 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 DA442_17755 8432fa85b82ebe29d71889e8c2df841e 298 Gene3D G3DSA:1.20.1510.10 9 214 4.4E-20 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily DA442_17755 8432fa85b82ebe29d71889e8c2df841e 298 SUPERFAMILY SSF161111 7 214 2.09E-32 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily DA442_10245 5580b90b4defb9501ff317d74a8803ec 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 4.6E-14 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_02850 260d779a5044d8c2ffcfa53046f9ba0b 495 SUPERFAMILY SSF53850 40 278 8.8E-37 T 14-10-2018 DA442_02850 260d779a5044d8c2ffcfa53046f9ba0b 495 Pfam PF01464 Transglycosylase SLT domain 304 417 8.5E-22 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 DA442_02850 260d779a5044d8c2ffcfa53046f9ba0b 495 Gene3D G3DSA:3.40.190.10 40 271 8.5E-48 T 14-10-2018 DA442_02850 260d779a5044d8c2ffcfa53046f9ba0b 495 Gene3D G3DSA:3.40.190.10 134 238 8.5E-48 T 14-10-2018 DA442_02850 260d779a5044d8c2ffcfa53046f9ba0b 495 SMART SM00062 45 282 1.7E-18 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DA442_02850 260d779a5044d8c2ffcfa53046f9ba0b 495 Gene3D G3DSA:1.10.530.10 298 464 1.4E-39 T 14-10-2018 DA442_02850 260d779a5044d8c2ffcfa53046f9ba0b 495 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 55 268 1.4E-26 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DA442_02850 260d779a5044d8c2ffcfa53046f9ba0b 495 SUPERFAMILY SSF53955 299 459 2.75E-37 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily DA442_24850 7108701561bcc1c533da1bc141caabb3 288 SUPERFAMILY SSF56112 22 223 4.59E-19 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily DA442_24850 7108701561bcc1c533da1bc141caabb3 288 Pfam PF01636 Phosphotransferase enzyme family 35 210 1.0E-9 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase DA442_24850 7108701561bcc1c533da1bc141caabb3 288 Gene3D G3DSA:3.90.1200.10 92 238 3.8E-5 T 14-10-2018 DA442_19320 047d963314d8c7762996d81c848816a8 329 Pfam PF01820 D-ala D-ala ligase N-terminus 4 105 3.4E-20 T 14-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DA442_19320 047d963314d8c7762996d81c848816a8 329 Gene3D G3DSA:3.30.1490.20 131 198 1.3E-80 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DA442_19320 047d963314d8c7762996d81c848816a8 329 PIRSF PIRSF039102 1 329 2.5E-77 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DA442_19320 047d963314d8c7762996d81c848816a8 329 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 329 32.715 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DA442_19320 047d963314d8c7762996d81c848816a8 329 Pfam PF07478 D-ala D-ala ligase C-terminus 125 325 2.0E-53 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DA442_19320 047d963314d8c7762996d81c848816a8 329 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 82 93 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DA442_19320 047d963314d8c7762996d81c848816a8 329 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 271 299 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DA442_19320 047d963314d8c7762996d81c848816a8 329 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 328 6.4E-99 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DA442_19320 047d963314d8c7762996d81c848816a8 329 SUPERFAMILY SSF52440 3 114 6.91E-27 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DA442_19320 047d963314d8c7762996d81c848816a8 329 Gene3D G3DSA:3.40.50.20 18 325 1.3E-80 T 14-10-2018 DA442_19320 047d963314d8c7762996d81c848816a8 329 Gene3D G3DSA:3.30.470.20 104 319 1.3E-80 T 14-10-2018 DA442_19320 047d963314d8c7762996d81c848816a8 329 SUPERFAMILY SSF56059 115 326 2.95E-43 T 14-10-2018 DA442_25705 854121dd9f24f84881f478ed205ac16f 244 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 46 196 3.4E-5 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 DA442_25705 854121dd9f24f84881f478ed205ac16f 244 Gene3D G3DSA:3.40.50.300 19 61 1.2E-5 T 14-10-2018 DA442_25705 854121dd9f24f84881f478ed205ac16f 244 Gene3D G3DSA:3.40.50.300 63 242 1.7E-41 T 14-10-2018 DA442_25705 854121dd9f24f84881f478ed205ac16f 244 SUPERFAMILY SSF52540 21 226 3.91E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_14335 4904d1be8ed53379626a9fa31cd56a6d 947 SUPERFAMILY SSF63411 515 717 1.29E-43 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DA442_14335 4904d1be8ed53379626a9fa31cd56a6d 947 SUPERFAMILY SSF63411 735 936 2.83E-42 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DA442_14335 4904d1be8ed53379626a9fa31cd56a6d 947 Gene3D G3DSA:3.30.830.10 43 267 1.0E-65 T 14-10-2018 DA442_14335 4904d1be8ed53379626a9fa31cd56a6d 947 SUPERFAMILY SSF63411 274 464 3.33E-32 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DA442_14335 4904d1be8ed53379626a9fa31cd56a6d 947 Pfam PF05193 Peptidase M16 inactive domain 682 853 2.4E-22 T 14-10-2018 IPR007863 Peptidase M16, C-terminal DA442_14335 4904d1be8ed53379626a9fa31cd56a6d 947 Pfam PF05193 Peptidase M16 inactive domain 215 390 3.7E-30 T 14-10-2018 IPR007863 Peptidase M16, C-terminal DA442_14335 4904d1be8ed53379626a9fa31cd56a6d 947 Gene3D G3DSA:3.30.830.10 270 468 2.3E-32 T 14-10-2018 DA442_14335 4904d1be8ed53379626a9fa31cd56a6d 947 Pfam PF00675 Insulinase (Peptidase family M16) 536 641 2.6E-10 T 14-10-2018 IPR011765 Peptidase M16, N-terminal DA442_14335 4904d1be8ed53379626a9fa31cd56a6d 947 Pfam PF00675 Insulinase (Peptidase family M16) 65 150 1.3E-16 T 14-10-2018 IPR011765 Peptidase M16, N-terminal DA442_14335 4904d1be8ed53379626a9fa31cd56a6d 947 Gene3D G3DSA:3.30.830.10 735 930 2.9E-38 T 14-10-2018 DA442_14335 4904d1be8ed53379626a9fa31cd56a6d 947 Gene3D G3DSA:3.30.830.10 521 726 2.2E-41 T 14-10-2018 DA442_14335 4904d1be8ed53379626a9fa31cd56a6d 947 SUPERFAMILY SSF63411 45 254 4.5E-55 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DA442_13810 af6cf8ba8589b80990146bace90040b8 103 SMART SM00530 11 66 1.1E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DA442_13810 af6cf8ba8589b80990146bace90040b8 103 Gene3D G3DSA:1.10.260.40 2 74 5.0E-16 T 14-10-2018 DA442_13810 af6cf8ba8589b80990146bace90040b8 103 SUPERFAMILY SSF47413 5 63 4.5E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DA442_13810 af6cf8ba8589b80990146bace90040b8 103 Pfam PF01381 Helix-turn-helix 12 63 6.6E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DA442_23375 b80788c716cc4a4671ca56febc5c4b84 266 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 2.7E-140 T 14-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 DA442_23375 b80788c716cc4a4671ca56febc5c4b84 266 Gene3D G3DSA:3.40.50.1360 1 266 2.6E-118 T 14-10-2018 DA442_23375 b80788c716cc4a4671ca56febc5c4b84 266 SUPERFAMILY SSF100950 1 263 2.77E-102 T 14-10-2018 IPR037171 NagB/RpiA transferase-like DA442_23375 b80788c716cc4a4671ca56febc5c4b84 266 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 10 218 4.9E-20 T 14-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 DA442_23375 b80788c716cc4a4671ca56febc5c4b84 266 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 40.676 T 14-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 DA442_23375 b80788c716cc4a4671ca56febc5c4b84 266 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 14-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 DA442_02355 aed65dabaa1d0cf29388fd34e353ab4d 437 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 8 436 33.175 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DA442_02355 aed65dabaa1d0cf29388fd34e353ab4d 437 Gene3D G3DSA:3.40.50.720 5 96 5.9E-20 T 14-10-2018 DA442_02355 aed65dabaa1d0cf29388fd34e353ab4d 437 SUPERFAMILY SSF53244 299 435 3.3E-42 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DA442_02355 aed65dabaa1d0cf29388fd34e353ab4d 437 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 9 434 2.2E-133 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DA442_02355 aed65dabaa1d0cf29388fd34e353ab4d 437 Pfam PF08245 Mur ligase middle domain 113 279 2.4E-31 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DA442_02355 aed65dabaa1d0cf29388fd34e353ab4d 437 SUPERFAMILY SSF53623 98 297 5.76E-56 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DA442_02355 aed65dabaa1d0cf29388fd34e353ab4d 437 Pfam PF02875 Mur ligase family, glutamate ligase domain 302 353 9.6E-7 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 DA442_02355 aed65dabaa1d0cf29388fd34e353ab4d 437 SUPERFAMILY SSF51984 9 97 1.02E-17 T 14-10-2018 DA442_02355 aed65dabaa1d0cf29388fd34e353ab4d 437 Gene3D G3DSA:3.40.1190.10 97 299 9.5E-69 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DA442_02355 aed65dabaa1d0cf29388fd34e353ab4d 437 Gene3D G3DSA:3.90.190.20 300 433 1.8E-38 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DA442_18105 a6a2060b39a403e026c478ffe3c27749 386 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 DA442_18105 a6a2060b39a403e026c478ffe3c27749 386 Gene3D G3DSA:4.10.320.10 128 167 1.1E-9 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 DA442_18105 a6a2060b39a403e026c478ffe3c27749 386 SUPERFAMILY SSF51230 3 88 6.15E-25 T 14-10-2018 IPR011053 Single hybrid motif DA442_18105 a6a2060b39a403e026c478ffe3c27749 386 Pfam PF00364 Biotin-requiring enzyme 5 77 3.4E-18 T 14-10-2018 IPR000089 Biotin/lipoyl attachment DA442_18105 a6a2060b39a403e026c478ffe3c27749 386 Gene3D G3DSA:3.30.559.10 178 384 1.0E-51 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 DA442_18105 a6a2060b39a403e026c478ffe3c27749 386 Pfam PF02817 e3 binding domain 131 163 5.6E-9 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 DA442_18105 a6a2060b39a403e026c478ffe3c27749 386 SUPERFAMILY SSF47005 124 166 4.05E-8 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 DA442_18105 a6a2060b39a403e026c478ffe3c27749 386 SUPERFAMILY SSF52777 174 382 4.89E-57 T 14-10-2018 DA442_18105 a6a2060b39a403e026c478ffe3c27749 386 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 176 382 1.8E-57 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 DA442_18105 a6a2060b39a403e026c478ffe3c27749 386 Gene3D G3DSA:2.40.50.100 2 92 3.9E-23 T 14-10-2018 DA442_05430 503bec5becdc6d0221f40dec33401fbf 248 SUPERFAMILY SSF50630 107 242 1.34E-41 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily DA442_05430 503bec5becdc6d0221f40dec33401fbf 248 Pfam PF05618 Putative ATP-dependant zinc protease 107 244 5.7E-47 T 14-10-2018 DA442_05430 503bec5becdc6d0221f40dec33401fbf 248 Gene3D G3DSA:1.20.5.340 20 86 2.8E-5 T 14-10-2018 DA442_05430 503bec5becdc6d0221f40dec33401fbf 248 Gene3D G3DSA:2.40.70.10 104 235 1.0E-41 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily DA442_25330 4485fe8aa5a0852d07db45359ea07153 153 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 1.8E-4 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DA442_25330 4485fe8aa5a0852d07db45359ea07153 153 SUPERFAMILY SSF46689 1 74 8.72E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_25330 4485fe8aa5a0852d07db45359ea07153 153 Gene3D G3DSA:1.10.10.60 2 60 4.3E-8 T 14-10-2018 DA442_25330 4485fe8aa5a0852d07db45359ea07153 153 Gene3D G3DSA:1.20.5.830 111 153 3.9E-29 T 14-10-2018 IPR027402 LuxT regulator, C-terminal domain superfamily DA442_25330 4485fe8aa5a0852d07db45359ea07153 153 Gene3D G3DSA:1.10.287.790 61 110 2.0E-32 T 14-10-2018 IPR027404 LuxT regulator, helix hairpin domain superfamily DA442_00610 cc2b2b9c934076f37f97ed4ab811712f 848 SMART SM00267 416 582 6.2E-29 T 14-10-2018 IPR000160 GGDEF domain DA442_00610 cc2b2b9c934076f37f97ed4ab811712f 848 Gene3D G3DSA:3.30.70.270 428 594 2.3E-33 T 14-10-2018 DA442_00610 cc2b2b9c934076f37f97ed4ab811712f 848 Gene3D G3DSA:3.30.450.20 220 334 3.1E-18 T 14-10-2018 DA442_00610 cc2b2b9c934076f37f97ed4ab811712f 848 Pfam PF02743 Cache domain 47 264 1.7E-23 T 14-10-2018 IPR033479 Double Cache domain 1 DA442_00610 cc2b2b9c934076f37f97ed4ab811712f 848 Pfam PF00672 HAMP domain 369 417 2.4E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_00610 cc2b2b9c934076f37f97ed4ab811712f 848 Pfam PF00563 EAL domain 600 834 8.3E-68 T 14-10-2018 IPR001633 EAL domain DA442_00610 cc2b2b9c934076f37f97ed4ab811712f 848 SMART SM00304 368 421 1.1E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_00610 cc2b2b9c934076f37f97ed4ab811712f 848 SUPERFAMILY SSF141868 600 846 1.57E-80 T 14-10-2018 IPR035919 EAL domain superfamily DA442_00610 cc2b2b9c934076f37f97ed4ab811712f 848 SUPERFAMILY SSF158472 369 418 2.48E-8 T 14-10-2018 DA442_00610 cc2b2b9c934076f37f97ed4ab811712f 848 SUPERFAMILY SSF55073 432 584 1.02E-31 T 14-10-2018 IPR029787 Nucleotide cyclase DA442_00610 cc2b2b9c934076f37f97ed4ab811712f 848 SMART SM00052 592 839 9.8E-98 T 14-10-2018 IPR001633 EAL domain DA442_00610 cc2b2b9c934076f37f97ed4ab811712f 848 Pfam PF00990 Diguanylate cyclase, GGDEF domain 428 574 9.2E-28 T 14-10-2018 IPR000160 GGDEF domain DA442_00610 cc2b2b9c934076f37f97ed4ab811712f 848 Gene3D G3DSA:3.30.450.20 146 219 3.1E-18 T 14-10-2018 DA442_00610 cc2b2b9c934076f37f97ed4ab811712f 848 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 426 573 5.0E-23 T 14-10-2018 IPR000160 GGDEF domain DA442_00610 cc2b2b9c934076f37f97ed4ab811712f 848 Gene3D G3DSA:3.20.20.450 595 847 1.8E-86 T 14-10-2018 IPR035919 EAL domain superfamily DA442_00610 cc2b2b9c934076f37f97ed4ab811712f 848 Gene3D G3DSA:1.20.1480.50 335 427 6.2E-11 T 14-10-2018 DA442_16155 2e77446d68474e830ab1e9975649be88 127 Pfam PF02300 Fumarate reductase subunit C 2 127 1.6E-49 T 14-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 DA442_16155 2e77446d68474e830ab1e9975649be88 127 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 1 127 26.979 T 14-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 DA442_16155 2e77446d68474e830ab1e9975649be88 127 Gene3D G3DSA:1.20.1300.10 1 127 3.4E-48 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DA442_16155 2e77446d68474e830ab1e9975649be88 127 PIRSF PIRSF000180 1 127 2.1E-57 T 14-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 DA442_16155 2e77446d68474e830ab1e9975649be88 127 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 7 127 5.0E-52 T 14-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 DA442_16155 2e77446d68474e830ab1e9975649be88 127 SUPERFAMILY SSF81343 1 127 1.02E-52 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DA442_03895 32abd82a6cb013847ef98d25bfc9398c 295 Gene3D G3DSA:3.30.70.890 167 285 1.3E-29 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily DA442_03895 32abd82a6cb013847ef98d25bfc9398c 295 Gene3D G3DSA:3.30.230.10 2 165 9.4E-53 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DA442_03895 32abd82a6cb013847ef98d25bfc9398c 295 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 10 284 3.1E-95 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 DA442_03895 32abd82a6cb013847ef98d25bfc9398c 295 Pfam PF08544 GHMP kinases C terminal 209 265 1.3E-6 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain DA442_03895 32abd82a6cb013847ef98d25bfc9398c 295 PIRSF PIRSF010376 9 285 1.9E-86 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 DA442_03895 32abd82a6cb013847ef98d25bfc9398c 295 Pfam PF00288 GHMP kinases N terminal domain 93 150 4.8E-9 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 DA442_03895 32abd82a6cb013847ef98d25bfc9398c 295 SUPERFAMILY SSF55060 167 282 6.23E-36 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily DA442_03895 32abd82a6cb013847ef98d25bfc9398c 295 SUPERFAMILY SSF54211 11 163 2.73E-43 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DA442_03895 32abd82a6cb013847ef98d25bfc9398c 295 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 11 272 31.28 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 DA442_19950 b92bf29e31cc89022fffe7b5a6a65fc5 129 SUPERFAMILY SSF54403 45 115 3.89E-14 T 14-10-2018 DA442_19950 b92bf29e31cc89022fffe7b5a6a65fc5 129 Pfam PF00031 Cystatin domain 53 110 2.3E-5 T 14-10-2018 IPR000010 Cystatin domain GO:0004869 DA442_19950 b92bf29e31cc89022fffe7b5a6a65fc5 129 Gene3D G3DSA:3.10.450.10 38 123 2.4E-7 T 14-10-2018 DA442_12125 80dbfe999b03d8ee1add25901a6f73e9 202 Pfam PF05036 Sporulation related domain 126 194 7.7E-13 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 DA442_12125 80dbfe999b03d8ee1add25901a6f73e9 202 Gene3D G3DSA:3.30.70.1070 120 196 4.1E-11 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 DA442_12125 80dbfe999b03d8ee1add25901a6f73e9 202 SUPERFAMILY SSF110997 125 198 2.62E-16 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 DA442_10725 aefa9c5f97f7e320bfb1ac6ff7886d05 629 Pfam PF00571 CBS domain 156 214 9.4E-7 T 14-10-2018 IPR000644 CBS domain DA442_10725 aefa9c5f97f7e320bfb1ac6ff7886d05 629 Pfam PF00571 CBS domain 226 278 3.5E-9 T 14-10-2018 IPR000644 CBS domain DA442_10725 aefa9c5f97f7e320bfb1ac6ff7886d05 629 Gene3D G3DSA:3.10.580.10 145 282 6.6E-32 T 14-10-2018 DA442_10725 aefa9c5f97f7e320bfb1ac6ff7886d05 629 SMART SM00116 233 280 5.2E-6 T 14-10-2018 IPR000644 CBS domain DA442_10725 aefa9c5f97f7e320bfb1ac6ff7886d05 629 SMART SM00116 159 216 8.4E-5 T 14-10-2018 IPR000644 CBS domain DA442_10725 aefa9c5f97f7e320bfb1ac6ff7886d05 629 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 479 622 1.9E-47 T 14-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding DA442_10725 aefa9c5f97f7e320bfb1ac6ff7886d05 629 SUPERFAMILY SSF54631 151 278 6.25E-27 T 14-10-2018 DA442_10725 aefa9c5f97f7e320bfb1ac6ff7886d05 629 Pfam PF00027 Cyclic nucleotide-binding domain 37 118 5.1E-14 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain DA442_10725 aefa9c5f97f7e320bfb1ac6ff7886d05 629 SUPERFAMILY SSF51206 7 135 1.11E-28 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like DA442_10725 aefa9c5f97f7e320bfb1ac6ff7886d05 629 Pfam PF03445 Putative nucleotidyltransferase DUF294 305 442 4.0E-46 T 14-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 DA442_10725 aefa9c5f97f7e320bfb1ac6ff7886d05 629 SMART SM00100 17 134 4.3E-7 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain DA442_10725 aefa9c5f97f7e320bfb1ac6ff7886d05 629 Gene3D G3DSA:2.60.120.10 1 144 8.4E-25 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DA442_03045 ffba0e76aba04e6aad417f78713c4881 386 Gene3D G3DSA:2.40.10.10 37 159 2.5E-18 T 14-10-2018 DA442_03045 ffba0e76aba04e6aad417f78713c4881 386 SMART SM00020 24 315 9.0E-26 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 DA442_03045 ffba0e76aba04e6aad417f78713c4881 386 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 364 384 1.7E-4 T 14-10-2018 IPR020008 GlyGly-CTERM domain DA442_03045 ffba0e76aba04e6aad417f78713c4881 386 SUPERFAMILY SSF50494 48 320 4.66E-42 T 14-10-2018 IPR009003 Peptidase S1, PA clan DA442_03045 ffba0e76aba04e6aad417f78713c4881 386 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 62 67 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 DA442_03045 ffba0e76aba04e6aad417f78713c4881 386 Gene3D G3DSA:2.40.10.10 160 318 5.8E-24 T 14-10-2018 DA442_03045 ffba0e76aba04e6aad417f78713c4881 386 Pfam PF00089 Trypsin 48 315 3.1E-28 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 DA442_03045 ffba0e76aba04e6aad417f78713c4881 386 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 52 67 1.6E-15 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 DA442_03045 ffba0e76aba04e6aad417f78713c4881 386 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 263 275 1.6E-15 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 DA442_03045 ffba0e76aba04e6aad417f78713c4881 386 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 136 150 1.6E-15 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 DA442_03045 ffba0e76aba04e6aad417f78713c4881 386 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 264 275 - T 14-10-2018 IPR033116 Serine proteases, trypsin family, serine active site DA442_17315 a8e8289edb6ff6d236f185e79d9e01ee 370 SUPERFAMILY SSF102405 84 291 2.29E-43 T 14-10-2018 DA442_17315 a8e8289edb6ff6d236f185e79d9e01ee 370 Gene3D G3DSA:3.40.50.450 2 294 1.7E-96 T 14-10-2018 DA442_17315 a8e8289edb6ff6d236f185e79d9e01ee 370 Gene3D G3DSA:1.10.10.10 307 365 7.2E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_17315 a8e8289edb6ff6d236f185e79d9e01ee 370 Pfam PF02481 DNA recombination-mediator protein A 77 281 6.4E-77 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 DA442_17315 a8e8289edb6ff6d236f185e79d9e01ee 370 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 76 289 5.3E-78 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 DA442_08570 d64124a7044650494e7686c8f394c5cf 658 SUPERFAMILY SSF48452 92 207 1.99E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_08570 d64124a7044650494e7686c8f394c5cf 658 Pfam PF13424 Tetratricopeptide repeat 218 288 7.6E-10 T 14-10-2018 DA442_08570 d64124a7044650494e7686c8f394c5cf 658 Pfam PF00990 Diguanylate cyclase, GGDEF domain 483 639 1.5E-33 T 14-10-2018 IPR000160 GGDEF domain DA442_08570 d64124a7044650494e7686c8f394c5cf 658 Gene3D G3DSA:1.25.40.10 43 328 1.9E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_08570 d64124a7044650494e7686c8f394c5cf 658 SMART SM00028 376 409 25.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_08570 d64124a7044650494e7686c8f394c5cf 658 SMART SM00028 179 212 400.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_08570 d64124a7044650494e7686c8f394c5cf 658 SMART SM00028 256 289 0.0078 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_08570 d64124a7044650494e7686c8f394c5cf 658 SMART SM00028 336 369 51.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_08570 d64124a7044650494e7686c8f394c5cf 658 SMART SM00028 296 329 10.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_08570 d64124a7044650494e7686c8f394c5cf 658 SMART SM00028 216 249 91.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_08570 d64124a7044650494e7686c8f394c5cf 658 SUPERFAMILY SSF48452 195 419 4.22E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_08570 d64124a7044650494e7686c8f394c5cf 658 Gene3D G3DSA:1.25.40.10 332 459 1.3E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_08570 d64124a7044650494e7686c8f394c5cf 658 Pfam PF13176 Tetratricopeptide repeat 381 409 0.0058 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_08570 d64124a7044650494e7686c8f394c5cf 658 Gene3D G3DSA:3.30.70.270 477 647 1.1E-39 T 14-10-2018 DA442_08570 d64124a7044650494e7686c8f394c5cf 658 SUPERFAMILY SSF55073 488 642 4.63E-34 T 14-10-2018 IPR029787 Nucleotide cyclase DA442_08570 d64124a7044650494e7686c8f394c5cf 658 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 481 642 1.3E-37 T 14-10-2018 IPR000160 GGDEF domain DA442_08570 d64124a7044650494e7686c8f394c5cf 658 SMART SM00267 472 644 2.3E-39 T 14-10-2018 IPR000160 GGDEF domain DA442_13390 e0e361acd2dd4c3ba87de1ad6f433940 326 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 103 310 4.9E-83 T 14-10-2018 DA442_13390 e0e361acd2dd4c3ba87de1ad6f433940 326 Gene3D G3DSA:3.30.70.2020 8 322 1.6E-168 T 14-10-2018 DA442_13390 e0e361acd2dd4c3ba87de1ad6f433940 326 Pfam PF00702 haloacid dehalogenase-like hydrolase 107 279 5.4E-15 T 14-10-2018 DA442_13390 e0e361acd2dd4c3ba87de1ad6f433940 326 Gene3D G3DSA:3.40.50.1000 2 310 1.6E-168 T 14-10-2018 IPR023214 HAD superfamily DA442_13390 e0e361acd2dd4c3ba87de1ad6f433940 326 Gene3D G3DSA:1.10.150.210 115 177 1.6E-168 T 14-10-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 DA442_13390 e0e361acd2dd4c3ba87de1ad6f433940 326 SUPERFAMILY SSF56784 107 310 2.07E-49 T 14-10-2018 IPR036412 HAD-like superfamily DA442_13390 e0e361acd2dd4c3ba87de1ad6f433940 326 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 107 277 9.8E-29 T 14-10-2018 DA442_05765 04aeacb0718f75878fafad4a556d8b67 430 Pfam PF01593 Flavin containing amine oxidoreductase 10 303 9.5E-18 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 DA442_05765 04aeacb0718f75878fafad4a556d8b67 430 SUPERFAMILY SSF51905 1 413 4.99E-49 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_05765 04aeacb0718f75878fafad4a556d8b67 430 Gene3D G3DSA:1.10.405.20 75 199 1.0E-25 T 14-10-2018 DA442_05765 04aeacb0718f75878fafad4a556d8b67 430 Gene3D G3DSA:3.50.50.60 3 397 1.0E-25 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_05765 04aeacb0718f75878fafad4a556d8b67 430 Gene3D G3DSA:3.30.70.1990 282 363 1.0E-25 T 14-10-2018 DA442_09625 63e3d72928725b4b790069fdb0064d83 29 Pfam PF11665 Protein of unknown function (DUF3265) 2 29 1.5E-14 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_12765 7e718fc3b3d817ba78459a2658e93a9b 452 SMART SM00228 212 281 3.2E-9 T 14-10-2018 IPR001478 PDZ domain GO:0005515 DA442_12765 7e718fc3b3d817ba78459a2658e93a9b 452 SMART SM00228 115 186 0.43 T 14-10-2018 IPR001478 PDZ domain GO:0005515 DA442_12765 7e718fc3b3d817ba78459a2658e93a9b 452 Pfam PF02163 Peptidase family M50 11 440 1.0E-86 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 DA442_12765 7e718fc3b3d817ba78459a2658e93a9b 452 Gene3D G3DSA:2.30.42.10 222 311 7.3E-21 T 14-10-2018 DA442_12765 7e718fc3b3d817ba78459a2658e93a9b 452 SUPERFAMILY SSF50156 210 294 1.71E-17 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 DA442_12765 7e718fc3b3d817ba78459a2658e93a9b 452 SUPERFAMILY SSF50156 89 185 4.47E-11 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 DA442_12765 7e718fc3b3d817ba78459a2658e93a9b 452 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 4 452 1.7E-135 T 14-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 DA442_12765 7e718fc3b3d817ba78459a2658e93a9b 452 Pfam PF13180 PDZ domain 226 288 3.4E-8 T 14-10-2018 IPR001478 PDZ domain GO:0005515 DA442_12765 7e718fc3b3d817ba78459a2658e93a9b 452 Gene3D G3DSA:2.30.42.10 126 221 7.3E-32 T 14-10-2018 DA442_21190 b2ca05b8b4a1265d5620d664ce938917 181 SUPERFAMILY SSF52833 40 181 4.95E-40 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_21190 b2ca05b8b4a1265d5620d664ce938917 181 Pfam PF00255 Glutathione peroxidase 42 133 5.3E-26 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 DA442_21190 b2ca05b8b4a1265d5620d664ce938917 181 ProSitePatterns PS00460 Glutathione peroxidases active site. 50 65 - T 14-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 DA442_21190 b2ca05b8b4a1265d5620d664ce938917 181 Gene3D G3DSA:3.40.30.10 26 181 3.3E-43 T 14-10-2018 DA442_21190 b2ca05b8b4a1265d5620d664ce938917 181 PIRSF PIRSF000303 2 181 1.5E-55 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 DA442_21190 b2ca05b8b4a1265d5620d664ce938917 181 PRINTS PR01011 Glutathione peroxidase family signature 143 152 3.5E-12 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 DA442_21190 b2ca05b8b4a1265d5620d664ce938917 181 PRINTS PR01011 Glutathione peroxidase family signature 48 65 3.5E-12 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 DA442_21190 b2ca05b8b4a1265d5620d664ce938917 181 PRINTS PR01011 Glutathione peroxidase family signature 83 99 3.5E-12 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 DA442_19740 ec648aef1e1da829f89d8367060133c1 282 Gene3D G3DSA:1.20.1080.10 2 251 1.7E-62 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 DA442_19740 ec648aef1e1da829f89d8367060133c1 282 Pfam PF01226 Formate/nitrite transporter 9 258 3.0E-58 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 DA442_00735 edac7c882dc269e07f2294dcae6923a9 404 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 9 402 5.1E-93 T 14-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 DA442_00735 edac7c882dc269e07f2294dcae6923a9 404 SUPERFAMILY SSF53067 150 239 1.19E-23 T 14-10-2018 DA442_00735 edac7c882dc269e07f2294dcae6923a9 404 Pfam PF12693 GspL periplasmic domain 245 403 8.8E-55 T 14-10-2018 IPR025691 GspL periplasmic domain DA442_00735 edac7c882dc269e07f2294dcae6923a9 404 Gene3D G3DSA:3.30.1360.100 318 404 5.9E-32 T 14-10-2018 DA442_00735 edac7c882dc269e07f2294dcae6923a9 404 Gene3D G3DSA:3.30.420.370 146 216 1.1E-86 T 14-10-2018 DA442_00735 edac7c882dc269e07f2294dcae6923a9 404 Gene3D G3DSA:3.30.420.380 7 238 1.1E-86 T 14-10-2018 DA442_00735 edac7c882dc269e07f2294dcae6923a9 404 PIRSF PIRSF015761 12 404 6.9E-40 T 14-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 DA442_00735 edac7c882dc269e07f2294dcae6923a9 404 Pfam PF05134 Type II secretion system (T2SS), protein L 9 241 8.2E-86 T 14-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain DA442_00735 edac7c882dc269e07f2294dcae6923a9 404 SUPERFAMILY SSF53067 6 148 3.43E-42 T 14-10-2018 DA442_17445 7c50b7b42d6adf315b5737225c52d38c 246 Gene3D G3DSA:1.10.3720.10 32 242 2.6E-56 T 14-10-2018 IPR035906 MetI-like superfamily DA442_17445 7c50b7b42d6adf315b5737225c52d38c 246 SUPERFAMILY SSF161098 41 227 1.26E-46 T 14-10-2018 IPR035906 MetI-like superfamily DA442_17445 7c50b7b42d6adf315b5737225c52d38c 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 60 242 3.5E-26 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DA442_17445 7c50b7b42d6adf315b5737225c52d38c 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 38 136 4.1E-29 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DA442_25660 5a0720436c2197c8aaaeff470212195a 266 Gene3D G3DSA:1.10.10.60 153 265 1.9E-23 T 14-10-2018 DA442_25660 5a0720436c2197c8aaaeff470212195a 266 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 261 9.7E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DA442_25660 5a0720436c2197c8aaaeff470212195a 266 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 230 245 9.7E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DA442_25660 5a0720436c2197c8aaaeff470212195a 266 SMART SM00342 179 261 3.7E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_25660 5a0720436c2197c8aaaeff470212195a 266 SUPERFAMILY SSF46689 214 263 3.07E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_25660 5a0720436c2197c8aaaeff470212195a 266 Pfam PF12833 Helix-turn-helix domain 185 262 7.3E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_22915 c10cf46b4f0759d8e6b972390d81fef1 277 SMART SM00342 188 270 1.3E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_22915 c10cf46b4f0759d8e6b972390d81fef1 277 Pfam PF12833 Helix-turn-helix domain 196 270 7.6E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_22915 c10cf46b4f0759d8e6b972390d81fef1 277 Gene3D G3DSA:2.60.120.10 7 109 1.3E-6 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DA442_22915 c10cf46b4f0759d8e6b972390d81fef1 277 Gene3D G3DSA:1.10.10.60 170 273 7.0E-19 T 14-10-2018 DA442_22915 c10cf46b4f0759d8e6b972390d81fef1 277 SUPERFAMILY SSF51182 32 196 2.08E-14 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DA442_22915 c10cf46b4f0759d8e6b972390d81fef1 277 SUPERFAMILY SSF46689 225 272 2.24E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_22915 c10cf46b4f0759d8e6b972390d81fef1 277 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 225 266 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DA442_24835 d1efbd3a705dca92e22275f85f3ce782 102 Pfam PF02001 Protein of unknown function DUF134 7 95 7.2E-20 T 14-10-2018 IPR002852 Uncharacterised protein family UPF0251 DA442_24835 d1efbd3a705dca92e22275f85f3ce782 102 SUPERFAMILY SSF88659 42 85 5.45E-6 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DA442_24835 d1efbd3a705dca92e22275f85f3ce782 102 Gene3D G3DSA:1.10.10.10 35 89 1.6E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_24835 d1efbd3a705dca92e22275f85f3ce782 102 Hamap MF_00674 UPF0251 protein . 8 101 23.322 T 14-10-2018 IPR002852 Uncharacterised protein family UPF0251 DA442_12090 70a9756154c715a099543e5a40cce46a 181 SUPERFAMILY SSF53271 11 178 2.02E-52 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like DA442_12090 70a9756154c715a099543e5a40cce46a 181 Pfam PF00156 Phosphoribosyl transferase domain 30 155 1.3E-15 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DA442_12090 70a9756154c715a099543e5a40cce46a 181 Gene3D G3DSA:3.40.50.2020 1 181 6.6E-66 T 14-10-2018 DA442_12090 70a9756154c715a099543e5a40cce46a 181 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 9 178 37.806 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 DA442_12090 70a9756154c715a099543e5a40cce46a 181 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 9 177 2.3E-72 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 DA442_15185 8a6bad0e7acaa4524cbccb70f3ae63a1 91 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 3 84 1.8E-21 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DA442_15185 8a6bad0e7acaa4524cbccb70f3ae63a1 91 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site DA442_15185 8a6bad0e7acaa4524cbccb70f3ae63a1 91 PRINTS PR00107 Phosphocarrier protein signature 40 55 8.7E-10 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DA442_15185 8a6bad0e7acaa4524cbccb70f3ae63a1 91 PRINTS PR00107 Phosphocarrier protein signature 14 30 8.7E-10 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DA442_15185 8a6bad0e7acaa4524cbccb70f3ae63a1 91 PRINTS PR00107 Phosphocarrier protein signature 55 72 8.7E-10 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DA442_15185 8a6bad0e7acaa4524cbccb70f3ae63a1 91 SUPERFAMILY SSF55594 4 90 7.07E-25 T 14-10-2018 IPR035895 HPr-like superfamily DA442_15185 8a6bad0e7acaa4524cbccb70f3ae63a1 91 Gene3D G3DSA:3.30.1340.10 1 85 1.1E-26 T 14-10-2018 IPR035895 HPr-like superfamily DA442_15185 8a6bad0e7acaa4524cbccb70f3ae63a1 91 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 41 56 - T 14-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site DA442_15185 8a6bad0e7acaa4524cbccb70f3ae63a1 91 Pfam PF00381 PTS HPr component phosphorylation site 4 84 2.0E-23 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DA442_08410 8fc5326e07e332ad7ef04433f9d8f63d 415 SUPERFAMILY SSF48695 212 252 6.2E-5 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily DA442_08410 8fc5326e07e332ad7ef04433f9d8f63d 415 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 10 402 7.8E-106 T 14-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type DA442_08410 8fc5326e07e332ad7ef04433f9d8f63d 415 Pfam PF04403 Paraquat-inducible protein A 54 205 1.0E-36 T 14-10-2018 IPR007498 Intermembrane transport protein PqiA-like DA442_08410 8fc5326e07e332ad7ef04433f9d8f63d 415 Pfam PF04403 Paraquat-inducible protein A 248 403 2.0E-47 T 14-10-2018 IPR007498 Intermembrane transport protein PqiA-like DA442_22110 f753c50aac9f448488201ec55cdfe281 251 SUPERFAMILY SSF160527 132 241 1.96E-6 T 14-10-2018 DA442_22110 f753c50aac9f448488201ec55cdfe281 251 Pfam PF02108 Flagellar assembly protein FliH 106 228 3.3E-29 T 14-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE DA442_06650 2e1c80d8e53918e2f4deb4727fba14a8 216 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 5 214 2.3E-79 T 14-10-2018 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 DA442_06650 2e1c80d8e53918e2f4deb4727fba14a8 216 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 3 214 1.6E-74 T 14-10-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 DA442_06650 2e1c80d8e53918e2f4deb4727fba14a8 216 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 2 215 35.992 T 14-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 DA442_06650 2e1c80d8e53918e2f4deb4727fba14a8 216 SUPERFAMILY SSF53335 3 214 2.13E-56 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_06650 2e1c80d8e53918e2f4deb4727fba14a8 216 Gene3D G3DSA:3.40.50.150 1 216 1.1E-62 T 14-10-2018 DA442_06650 2e1c80d8e53918e2f4deb4727fba14a8 216 PIRSF PIRSF023956 1 216 1.4E-73 T 14-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 DA442_16965 d65a9a994ec84cd64907f38560540f87 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 78 90 2.3E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DA442_16965 d65a9a994ec84cd64907f38560540f87 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 191 204 2.3E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DA442_16965 d65a9a994ec84cd64907f38560540f87 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 370 383 2.3E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DA442_16965 d65a9a994ec84cd64907f38560540f87 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 2.3E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DA442_16965 d65a9a994ec84cd64907f38560540f87 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 58 76 2.3E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DA442_16965 d65a9a994ec84cd64907f38560540f87 417 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 31 370 1.2E-26 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 DA442_16965 d65a9a994ec84cd64907f38560540f87 417 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 58 76 - T 14-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site DA442_16965 d65a9a994ec84cd64907f38560540f87 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 165 174 3.4E-30 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DA442_16965 d65a9a994ec84cd64907f38560540f87 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 76 93 3.4E-30 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DA442_16965 d65a9a994ec84cd64907f38560540f87 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 380 402 3.4E-30 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DA442_16965 d65a9a994ec84cd64907f38560540f87 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 300 318 3.4E-30 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DA442_16965 d65a9a994ec84cd64907f38560540f87 417 SUPERFAMILY SSF50621 261 414 2.93E-53 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DA442_16965 d65a9a994ec84cd64907f38560540f87 417 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 36 282 4.9E-70 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 DA442_16965 d65a9a994ec84cd64907f38560540f87 417 Gene3D G3DSA:2.40.37.10 17 404 2.4E-152 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DA442_16965 d65a9a994ec84cd64907f38560540f87 417 SUPERFAMILY SSF51419 27 284 5.38E-82 T 14-10-2018 IPR029066 PLP-binding barrel DA442_16965 d65a9a994ec84cd64907f38560540f87 417 Gene3D G3DSA:3.20.20.10 35 277 2.4E-152 T 14-10-2018 IPR029066 PLP-binding barrel DA442_16965 d65a9a994ec84cd64907f38560540f87 417 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 16 413 41.268 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DA442_16965 d65a9a994ec84cd64907f38560540f87 417 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 5 412 2.2E-167 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DA442_06720 d8a1e8f13a2f1d7e82e11345bfcb1724 342 SUPERFAMILY SSF53187 8 329 1.32E-77 T 14-10-2018 DA442_06720 d8a1e8f13a2f1d7e82e11345bfcb1724 342 Gene3D G3DSA:3.40.630.10 1 342 1.9E-123 T 14-10-2018 DA442_06720 d8a1e8f13a2f1d7e82e11345bfcb1724 342 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 53 330 2.1E-70 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 DA442_06720 d8a1e8f13a2f1d7e82e11345bfcb1724 342 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 342 135.341 T 14-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 DA442_06720 d8a1e8f13a2f1d7e82e11345bfcb1724 342 PIRSF PIRSF017020 4 336 2.0E-127 T 14-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 DA442_10295 8146b3f13c6d78a1ae4c15e337eac11d 84 Gene3D G3DSA:3.40.1620.10 1 40 2.7E-8 T 14-10-2018 DA442_10295 8146b3f13c6d78a1ae4c15e337eac11d 84 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 55 1.9E-7 T 14-10-2018 DA442_10295 8146b3f13c6d78a1ae4c15e337eac11d 84 SUPERFAMILY SSF143120 1 81 1.27E-23 T 14-10-2018 IPR036165 YefM-like superfamily DA442_10295 8146b3f13c6d78a1ae4c15e337eac11d 84 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 74 3.9E-21 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM DA442_10295 8146b3f13c6d78a1ae4c15e337eac11d 84 Gene3D G3DSA:1.10.1220.170 41 84 2.5E-13 T 14-10-2018 DA442_04300 0b301bffa2d8fb5aba2d0e2a910a3f01 171 Pfam PF17323 Trans-membrane regulatory protein ToxS 21 169 1.0E-69 T 14-10-2018 IPR035288 Trans-membrane regulatory protein ToxS GO:0016021 DA442_04300 0b301bffa2d8fb5aba2d0e2a910a3f01 171 ProDom PD016359 TRANSMEMBRANE TOXS REGULATORY MEMBRANE PERIPLASMIC 1 171 6.0E-95 T 14-10-2018 IPR035288 Trans-membrane regulatory protein ToxS GO:0016021 DA442_25025 f6d41ad0931fd6f95a9a703ff06ec412 338 Gene3D G3DSA:3.30.70.270 180 338 1.4E-41 T 14-10-2018 DA442_25025 f6d41ad0931fd6f95a9a703ff06ec412 338 SMART SM00267 176 337 3.9E-35 T 14-10-2018 IPR000160 GGDEF domain DA442_25025 f6d41ad0931fd6f95a9a703ff06ec412 338 Pfam PF00990 Diguanylate cyclase, GGDEF domain 189 336 3.3E-35 T 14-10-2018 IPR000160 GGDEF domain DA442_25025 f6d41ad0931fd6f95a9a703ff06ec412 338 SUPERFAMILY SSF55073 192 336 3.22E-38 T 14-10-2018 IPR029787 Nucleotide cyclase DA442_25025 f6d41ad0931fd6f95a9a703ff06ec412 338 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 184 336 1.9E-32 T 14-10-2018 IPR000160 GGDEF domain DA442_02780 27d440635deaa9c70f1caeeb96fcbf52 308 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 192 209 - T 14-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 DA442_02780 27d440635deaa9c70f1caeeb96fcbf52 308 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 9 302 43.982 T 14-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 DA442_02780 27d440635deaa9c70f1caeeb96fcbf52 308 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 13 303 2.7E-131 T 14-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 DA442_02780 27d440635deaa9c70f1caeeb96fcbf52 308 SUPERFAMILY SSF53697 12 256 3.34E-73 T 14-10-2018 DA442_02780 27d440635deaa9c70f1caeeb96fcbf52 308 Gene3D G3DSA:1.10.8.1080 226 304 7.7E-31 T 14-10-2018 DA442_02780 27d440635deaa9c70f1caeeb96fcbf52 308 Pfam PF13580 SIS domain 49 172 9.0E-10 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DA442_02780 27d440635deaa9c70f1caeeb96fcbf52 308 Gene3D G3DSA:3.40.50.10490 8 225 2.4E-79 T 14-10-2018 DA442_00730 2cab0effdad9fcfba1bd77107c5cb579 336 Gene3D G3DSA:3.30.1300.30 42 309 7.1E-92 T 14-10-2018 DA442_00730 2cab0effdad9fcfba1bd77107c5cb579 336 Gene3D G3DSA:1.10.40.60 99 215 7.1E-92 T 14-10-2018 IPR038072 GspK, central domain superfamily DA442_00730 2cab0effdad9fcfba1bd77107c5cb579 336 SUPERFAMILY SSF54523 36 325 1.88E-36 T 14-10-2018 DA442_00730 2cab0effdad9fcfba1bd77107c5cb579 336 Gene3D G3DSA:1.10.40.60 216 285 7.1E-92 T 14-10-2018 IPR038072 GspK, central domain superfamily DA442_00730 2cab0effdad9fcfba1bd77107c5cb579 336 PIRSF PIRSF002786 1 328 1.9E-65 T 14-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 DA442_00730 2cab0effdad9fcfba1bd77107c5cb579 336 SUPERFAMILY SSF158544 215 282 8.63E-20 T 14-10-2018 IPR038072 GspK, central domain superfamily DA442_00730 2cab0effdad9fcfba1bd77107c5cb579 336 SUPERFAMILY SSF158544 101 213 9.42E-33 T 14-10-2018 IPR038072 GspK, central domain superfamily DA442_00730 2cab0effdad9fcfba1bd77107c5cb579 336 Pfam PF03934 Type II secretion system (T2SS), protein K 30 317 1.4E-88 T 14-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 DA442_01285 8f5ad8bb3d3d8e0b26347bad5ae3e137 480 Gene3D G3DSA:2.60.120.10 359 475 1.0E-18 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DA442_01285 8f5ad8bb3d3d8e0b26347bad5ae3e137 480 Pfam PF00483 Nucleotidyl transferase 4 293 2.5E-74 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 DA442_01285 8f5ad8bb3d3d8e0b26347bad5ae3e137 480 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 2 473 3.1E-230 T 14-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 DA442_01285 8f5ad8bb3d3d8e0b26347bad5ae3e137 480 Gene3D G3DSA:3.90.550.10 2 357 7.8E-124 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DA442_01285 8f5ad8bb3d3d8e0b26347bad5ae3e137 480 SUPERFAMILY SSF51182 191 470 1.87E-81 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DA442_01285 8f5ad8bb3d3d8e0b26347bad5ae3e137 480 SUPERFAMILY SSF53448 2 288 1.24E-72 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DA442_01285 8f5ad8bb3d3d8e0b26347bad5ae3e137 480 Pfam PF01050 Mannose-6-phosphate isomerase 321 471 2.6E-69 T 14-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 DA442_13825 30aaa3f52c102164b6d046530f5c4d03 132 PIRSF PIRSF029225 2 132 2.2E-47 T 14-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_13825 30aaa3f52c102164b6d046530f5c4d03 132 SUPERFAMILY SSF102220 30 131 1.18E-31 T 14-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_13825 30aaa3f52c102164b6d046530f5c4d03 132 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 36 128 4.0E-5 T 14-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_13825 30aaa3f52c102164b6d046530f5c4d03 132 Gene3D G3DSA:3.40.50.10220 35 132 1.0E-30 T 14-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_13825 30aaa3f52c102164b6d046530f5c4d03 132 Pfam PF03603 DNA polymerase III psi subunit 4 130 5.0E-39 T 14-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_01425 f63f291b9325042f371bc646bf08f846 209 Pfam PF00297 Ribosomal protein L3 93 182 1.5E-16 T 14-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_01425 f63f291b9325042f371bc646bf08f846 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 6.7E-95 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01425 f63f291b9325042f371bc646bf08f846 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 14-10-2018 IPR019926 Ribosomal protein L3, conserved site DA442_01425 f63f291b9325042f371bc646bf08f846 209 Gene3D G3DSA:2.40.50.620 32 96 2.2E-15 T 14-10-2018 DA442_01425 f63f291b9325042f371bc646bf08f846 209 SUPERFAMILY SSF50447 1 208 3.62E-84 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DA442_01425 f63f291b9325042f371bc646bf08f846 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 41.124 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01425 f63f291b9325042f371bc646bf08f846 209 Gene3D G3DSA:2.40.30.10 128 209 5.4E-20 T 14-10-2018 DA442_13220 d5fcecd492b05da985b64ed6ee768c89 341 SUPERFAMILY SSF47413 3 60 1.27E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DA442_13220 d5fcecd492b05da985b64ed6ee768c89 341 Pfam PF13377 Periplasmic binding protein-like domain 172 333 2.7E-34 T 14-10-2018 DA442_13220 d5fcecd492b05da985b64ed6ee768c89 341 SMART SM00354 4 74 7.4E-12 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DA442_13220 d5fcecd492b05da985b64ed6ee768c89 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 14-10-2018 DA442_13220 d5fcecd492b05da985b64ed6ee768c89 341 Gene3D G3DSA:3.40.50.2300 82 319 3.8E-57 T 14-10-2018 DA442_13220 d5fcecd492b05da985b64ed6ee768c89 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 4.4E-13 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DA442_13220 d5fcecd492b05da985b64ed6ee768c89 341 Gene3D G3DSA:1.10.260.40 1 63 1.2E-18 T 14-10-2018 DA442_13220 d5fcecd492b05da985b64ed6ee768c89 341 SUPERFAMILY SSF53822 65 334 4.12E-60 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DA442_13220 d5fcecd492b05da985b64ed6ee768c89 341 Gene3D G3DSA:3.40.50.2300 163 293 3.8E-57 T 14-10-2018 DA442_04865 98c3212e8f585eb09fb39c535c271732 329 Gene3D G3DSA:3.20.20.120 99 300 1.3E-114 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily DA442_04865 98c3212e8f585eb09fb39c535c271732 329 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 326 20.737 T 14-10-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 DA442_04865 98c3212e8f585eb09fb39c535c271732 329 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 311 5.8E-109 T 14-10-2018 DA442_04865 98c3212e8f585eb09fb39c535c271732 329 SUPERFAMILY SSF51604 106 321 5.24E-47 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily DA442_04865 98c3212e8f585eb09fb39c535c271732 329 SUPERFAMILY SSF54826 1 100 5.3E-25 T 14-10-2018 DA442_04865 98c3212e8f585eb09fb39c535c271732 329 Pfam PF13378 Enolase C-terminal domain-like 125 279 4.5E-13 T 14-10-2018 IPR029065 Enolase C-terminal domain-like DA442_04865 98c3212e8f585eb09fb39c535c271732 329 SMART SM00922 116 213 7.4E-6 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DA442_04865 98c3212e8f585eb09fb39c535c271732 329 Gene3D G3DSA:3.30.390.10 4 306 1.3E-114 T 14-10-2018 IPR029017 Enolase-like, N-terminal DA442_03715 a5a03788e044d6e51e5792788d5e3abf 339 SUPERFAMILY SSF52540 1 208 4.14E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_03715 a5a03788e044d6e51e5792788d5e3abf 339 Gene3D G3DSA:1.10.8.60 143 212 1.3E-19 T 14-10-2018 DA442_03715 a5a03788e044d6e51e5792788d5e3abf 339 Pfam PF06144 DNA polymerase III, delta subunit 20 189 1.1E-45 T 14-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 DA442_03715 a5a03788e044d6e51e5792788d5e3abf 339 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 331 4.7E-101 T 14-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 DA442_03715 a5a03788e044d6e51e5792788d5e3abf 339 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 332 2.1E-30 T 14-10-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_03715 a5a03788e044d6e51e5792788d5e3abf 339 Gene3D G3DSA:3.40.50.300 1 139 5.3E-49 T 14-10-2018 DA442_03715 a5a03788e044d6e51e5792788d5e3abf 339 Gene3D G3DSA:1.20.272.10 213 337 4.8E-38 T 14-10-2018 DA442_03715 a5a03788e044d6e51e5792788d5e3abf 339 SUPERFAMILY SSF48019 211 331 7.14E-31 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 DA442_17770 eebab2ef21ec5ae96171c393166f19ec 656 ProSitePatterns PS00455 Putative AMP-binding domain signature. 277 288 - T 14-10-2018 IPR020845 AMP-binding, conserved site DA442_17770 eebab2ef21ec5ae96171c393166f19ec 656 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 5 648 2.8E-233 T 14-10-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 DA442_17770 eebab2ef21ec5ae96171c393166f19ec 656 Gene3D G3DSA:3.40.50.12780 68 528 1.9E-56 T 14-10-2018 DA442_17770 eebab2ef21ec5ae96171c393166f19ec 656 SUPERFAMILY SSF56801 36 633 6.02E-123 T 14-10-2018 DA442_17770 eebab2ef21ec5ae96171c393166f19ec 656 Pfam PF00501 AMP-binding enzyme 104 532 3.0E-45 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DA442_17770 eebab2ef21ec5ae96171c393166f19ec 656 Gene3D G3DSA:3.30.300.30 532 655 9.7E-16 T 14-10-2018 DA442_22190 26ee1d8a77fdbfade3344e467dc6c07b 445 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 2 100 1.7E-15 T 14-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 DA442_22190 26ee1d8a77fdbfade3344e467dc6c07b 445 Pfam PF07196 Flagellin hook IN motif 124 181 1.1E-5 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 DA442_22190 26ee1d8a77fdbfade3344e467dc6c07b 445 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 216 439 8.1E-52 T 14-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 DA442_13900 efe0ee3eb09a01adfb363dffdf16e2e3 495 Gene3D G3DSA:2.40.50.140 135 198 6.0E-17 T 14-10-2018 DA442_13900 efe0ee3eb09a01adfb363dffdf16e2e3 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 2.7E-8 T 14-10-2018 DA442_13900 efe0ee3eb09a01adfb363dffdf16e2e3 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 2.5E-125 T 14-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 DA442_13900 efe0ee3eb09a01adfb363dffdf16e2e3 495 Gene3D G3DSA:3.30.300.20 199 277 1.7E-30 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta DA442_13900 efe0ee3eb09a01adfb363dffdf16e2e3 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 2.8E-22 T 14-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication DA442_13900 efe0ee3eb09a01adfb363dffdf16e2e3 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 440 489 1.9E-18 T 14-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication DA442_13900 efe0ee3eb09a01adfb363dffdf16e2e3 495 Gene3D G3DSA:1.10.150.20 352 421 8.3E-30 T 14-10-2018 DA442_13900 efe0ee3eb09a01adfb363dffdf16e2e3 495 Pfam PF13184 NusA-like KH domain 230 297 3.1E-27 T 14-10-2018 IPR025249 KH domain, NusA-like GO:0003723 DA442_13900 efe0ee3eb09a01adfb363dffdf16e2e3 495 SUPERFAMILY SSF47794 429 492 1.0E-16 T 14-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 DA442_13900 efe0ee3eb09a01adfb363dffdf16e2e3 495 SUPERFAMILY SSF47794 356 415 7.06E-17 T 14-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 DA442_13900 efe0ee3eb09a01adfb363dffdf16e2e3 495 Pfam PF08529 NusA N-terminal domain 4 123 5.3E-35 T 14-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 DA442_13900 efe0ee3eb09a01adfb363dffdf16e2e3 495 SUPERFAMILY SSF54814 201 278 6.34E-29 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 DA442_13900 efe0ee3eb09a01adfb363dffdf16e2e3 495 SUPERFAMILY SSF54814 279 342 2.75E-15 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 DA442_13900 efe0ee3eb09a01adfb363dffdf16e2e3 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 424 28.773 T 14-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 DA442_13900 efe0ee3eb09a01adfb363dffdf16e2e3 495 Gene3D G3DSA:3.30.1480.10 1 129 1.2E-43 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 DA442_13900 efe0ee3eb09a01adfb363dffdf16e2e3 495 Gene3D G3DSA:1.10.150.20 431 490 5.7E-25 T 14-10-2018 DA442_13900 efe0ee3eb09a01adfb363dffdf16e2e3 495 SMART SM00316 133 198 9.4E-6 T 14-10-2018 IPR022967 RNA-binding domain, S1 DA442_13900 efe0ee3eb09a01adfb363dffdf16e2e3 495 SUPERFAMILY SSF50249 132 199 1.63E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_13900 efe0ee3eb09a01adfb363dffdf16e2e3 495 SUPERFAMILY SSF69705 1 126 2.49E-40 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 DA442_13900 efe0ee3eb09a01adfb363dffdf16e2e3 495 Gene3D G3DSA:3.30.300.20 278 345 1.3E-24 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta DA442_12190 2622db57cc2af5cb87c84911f31f54cf 176 Pfam PF04315 Elongation factor P hydroxylase 11 171 1.3E-72 T 14-10-2018 IPR007411 Elongation factor P hydroxylase DA442_19490 4d8f039d08a28bf6b9cba62bf496113f 323 Pfam PF00990 Diguanylate cyclase, GGDEF domain 155 316 3.0E-42 T 14-10-2018 IPR000160 GGDEF domain DA442_19490 4d8f039d08a28bf6b9cba62bf496113f 323 Pfam PF00072 Response regulator receiver domain 14 121 2.1E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_19490 4d8f039d08a28bf6b9cba62bf496113f 323 SUPERFAMILY SSF52172 10 159 1.71E-36 T 14-10-2018 IPR011006 CheY-like superfamily DA442_19490 4d8f039d08a28bf6b9cba62bf496113f 323 Gene3D G3DSA:3.30.70.270 145 322 1.7E-51 T 14-10-2018 DA442_19490 4d8f039d08a28bf6b9cba62bf496113f 323 SMART SM00267 144 320 1.0E-50 T 14-10-2018 IPR000160 GGDEF domain DA442_19490 4d8f039d08a28bf6b9cba62bf496113f 323 Gene3D G3DSA:3.40.50.2300 3 144 1.9E-32 T 14-10-2018 DA442_19490 4d8f039d08a28bf6b9cba62bf496113f 323 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 152 319 5.6E-46 T 14-10-2018 IPR000160 GGDEF domain DA442_19490 4d8f039d08a28bf6b9cba62bf496113f 323 SMART SM00448 12 124 1.5E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_19490 4d8f039d08a28bf6b9cba62bf496113f 323 SUPERFAMILY SSF55073 160 321 5.1E-44 T 14-10-2018 IPR029787 Nucleotide cyclase DA442_15255 fe994db0f8ff49c48b31c5a2a8abd783 189 Gene3D G3DSA:3.90.950.10 5 189 2.3E-70 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DA442_15255 fe994db0f8ff49c48b31c5a2a8abd783 189 PIRSF PIRSF006305 2 189 4.8E-57 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 DA442_15255 fe994db0f8ff49c48b31c5a2a8abd783 189 SUPERFAMILY SSF52972 5 187 4.51E-63 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DA442_15255 fe994db0f8ff49c48b31c5a2a8abd783 189 Pfam PF02545 Maf-like protein 7 187 2.2E-60 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 DA442_15255 fe994db0f8ff49c48b31c5a2a8abd783 189 TIGRFAM TIGR00172 maf: septum formation protein Maf 6 184 5.2E-55 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 DA442_15255 fe994db0f8ff49c48b31c5a2a8abd783 189 Hamap MF_00528 Septum formation protein Maf [maf]. 6 189 29.717 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 DA442_22375 2ef22bb89ea6052449f8c5b979d624e0 478 SUPERFAMILY SSF46689 212 262 1.97E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_22375 2ef22bb89ea6052449f8c5b979d624e0 478 Gene3D G3DSA:2.60.40.2440 274 373 2.6E-9 T 14-10-2018 IPR038175 CBM21 domain superfamily GO:0005515 DA442_22375 2ef22bb89ea6052449f8c5b979d624e0 478 SMART SM00342 175 257 7.6E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_22375 2ef22bb89ea6052449f8c5b979d624e0 478 Pfam PF12833 Helix-turn-helix domain 182 259 4.9E-16 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_22375 2ef22bb89ea6052449f8c5b979d624e0 478 Gene3D G3DSA:1.10.10.60 157 267 3.6E-23 T 14-10-2018 DA442_05530 c8b656f70b52cacd73349cf7634c0aaf 251 Pfam PF13432 Tetratricopeptide repeat 145 196 6.9E-7 T 14-10-2018 DA442_05530 c8b656f70b52cacd73349cf7634c0aaf 251 SMART SM00028 207 240 0.27 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_05530 c8b656f70b52cacd73349cf7634c0aaf 251 SMART SM00028 171 204 28.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_05530 c8b656f70b52cacd73349cf7634c0aaf 251 Gene3D G3DSA:1.25.40.10 133 251 1.5E-23 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_05530 c8b656f70b52cacd73349cf7634c0aaf 251 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 134 249 3.9E-39 T 14-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal DA442_05530 c8b656f70b52cacd73349cf7634c0aaf 251 Gene3D G3DSA:1.20.5.110 40 119 4.6E-21 T 14-10-2018 DA442_05530 c8b656f70b52cacd73349cf7634c0aaf 251 Pfam PF13174 Tetratricopeptide repeat 208 240 8.9E-8 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_05530 c8b656f70b52cacd73349cf7634c0aaf 251 SUPERFAMILY SSF48452 134 244 2.34E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_05530 c8b656f70b52cacd73349cf7634c0aaf 251 Pfam PF16331 TolA binding protein trimerisation 42 114 8.4E-24 T 14-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 DA442_05530 c8b656f70b52cacd73349cf7634c0aaf 251 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 5 251 17.579 T 14-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 DA442_17830 470a24caf10fd0af2583e684b8b99ffb 212 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 2 198 38.692 T 14-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 DA442_17830 470a24caf10fd0af2583e684b8b99ffb 212 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 3 211 1.4E-76 T 14-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 DA442_17830 470a24caf10fd0af2583e684b8b99ffb 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 132 148 5.4E-45 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 DA442_17830 470a24caf10fd0af2583e684b8b99ffb 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 62 74 5.4E-45 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 DA442_17830 470a24caf10fd0af2583e684b8b99ffb 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 4 27 5.4E-45 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 DA442_17830 470a24caf10fd0af2583e684b8b99ffb 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 160 172 5.4E-45 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 DA442_17830 470a24caf10fd0af2583e684b8b99ffb 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 80 100 5.4E-45 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 DA442_17830 470a24caf10fd0af2583e684b8b99ffb 212 Gene3D G3DSA:3.40.630.20 1 212 1.4E-77 T 14-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 DA442_17830 470a24caf10fd0af2583e684b8b99ffb 212 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 69 85 - T 14-10-2018 IPR033693 Pyroglutamyl peptidase I, Glu active site MetaCyc: PWY-7942 DA442_17830 470a24caf10fd0af2583e684b8b99ffb 212 PIRSF PIRSF015592 1 210 1.7E-82 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 DA442_17830 470a24caf10fd0af2583e684b8b99ffb 212 Pfam PF01470 Pyroglutamyl peptidase 2 199 2.9E-76 T 14-10-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like MetaCyc: PWY-7942 DA442_17830 470a24caf10fd0af2583e684b8b99ffb 212 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 130 144 - T 14-10-2018 IPR033694 Pyroglutamyl peptidase I, Cys active site MetaCyc: PWY-7942 DA442_17830 470a24caf10fd0af2583e684b8b99ffb 212 SUPERFAMILY SSF53182 1 211 3.14E-70 T 14-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 DA442_24250 55368d4b3808fb8eb65db5e1a4fde39c 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 8.7E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_24250 55368d4b3808fb8eb65db5e1a4fde39c 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 196 216 8.7E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_24250 55368d4b3808fb8eb65db5e1a4fde39c 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 66 77 8.7E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_24250 55368d4b3808fb8eb65db5e1a4fde39c 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 8.7E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_24250 55368d4b3808fb8eb65db5e1a4fde39c 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 8.7E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_24250 55368d4b3808fb8eb65db5e1a4fde39c 235 SUPERFAMILY SSF51735 2 235 4.23E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_24250 55368d4b3808fb8eb65db5e1a4fde39c 235 Pfam PF00106 short chain dehydrogenase 3 192 5.8E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_24250 55368d4b3808fb8eb65db5e1a4fde39c 235 Gene3D G3DSA:3.40.50.720 2 235 3.8E-43 T 14-10-2018 DA442_06820 3d95635d42746e6b8d414a4dad329a8f 333 PIRSF PIRSF029792 1 333 1.8E-139 T 14-10-2018 IPR008794 Proline racemase family DA442_06820 3d95635d42746e6b8d414a4dad329a8f 333 Pfam PF05544 Proline racemase 8 330 7.8E-129 T 14-10-2018 IPR008794 Proline racemase family DA442_06820 3d95635d42746e6b8d414a4dad329a8f 333 SUPERFAMILY SSF54506 3 330 2.69E-119 T 14-10-2018 DA442_06820 3d95635d42746e6b8d414a4dad329a8f 333 Gene3D G3DSA:3.10.310.10 7 331 3.6E-114 T 14-10-2018 DA442_06820 3d95635d42746e6b8d414a4dad329a8f 333 Gene3D G3DSA:3.10.310.10 144 309 3.6E-114 T 14-10-2018 DA442_06075 d3ad362cd5f7150b751072a575d60e1b 484 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 8 484 8.7E-154 T 14-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 DA442_06075 d3ad362cd5f7150b751072a575d60e1b 484 Pfam PF13396 Phospholipase_D-nuclease N-terminal 24 59 3.0E-6 T 14-10-2018 IPR027379 Cardiolipin synthase N-terminal DA442_06075 d3ad362cd5f7150b751072a575d60e1b 484 Pfam PF13091 PLD-like domain 134 268 7.8E-16 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 DA442_06075 d3ad362cd5f7150b751072a575d60e1b 484 Pfam PF13091 PLD-like domain 327 444 2.0E-24 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 DA442_06075 d3ad362cd5f7150b751072a575d60e1b 484 SMART SM00155 219 246 4.0E-6 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 DA442_06075 d3ad362cd5f7150b751072a575d60e1b 484 SMART SM00155 397 424 9.5E-7 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 DA442_06075 d3ad362cd5f7150b751072a575d60e1b 484 PIRSF PIRSF000850 102 252 1.8 T 14-10-2018 DA442_06075 d3ad362cd5f7150b751072a575d60e1b 484 PIRSF PIRSF000850 294 376 0.12 T 14-10-2018 DA442_06075 d3ad362cd5f7150b751072a575d60e1b 484 PIRSF PIRSF000850 387 475 0.76 T 14-10-2018 DA442_06075 d3ad362cd5f7150b751072a575d60e1b 484 Gene3D G3DSA:3.30.870.10 315 456 2.5E-24 T 14-10-2018 DA442_06075 d3ad362cd5f7150b751072a575d60e1b 484 SUPERFAMILY SSF56024 66 313 2.47E-50 T 14-10-2018 DA442_06075 d3ad362cd5f7150b751072a575d60e1b 484 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 484 49.867 T 14-10-2018 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 DA442_06075 d3ad362cd5f7150b751072a575d60e1b 484 Gene3D G3DSA:3.30.870.10 116 309 5.3E-37 T 14-10-2018 DA442_06075 d3ad362cd5f7150b751072a575d60e1b 484 SUPERFAMILY SSF56024 273 469 1.3E-48 T 14-10-2018 DA442_00570 15d956aac024caf43a9d7a215134baf2 205 Gene3D G3DSA:1.10.760.10 109 205 3.2E-27 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_00570 15d956aac024caf43a9d7a215134baf2 205 Pfam PF00034 Cytochrome c 116 201 1.0E-9 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_00570 15d956aac024caf43a9d7a215134baf2 205 Pfam PF00034 Cytochrome c 25 104 4.7E-10 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_00570 15d956aac024caf43a9d7a215134baf2 205 SUPERFAMILY SSF46626 6 106 1.38E-22 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_00570 15d956aac024caf43a9d7a215134baf2 205 Gene3D G3DSA:1.10.760.10 19 108 2.2E-27 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_00570 15d956aac024caf43a9d7a215134baf2 205 PRINTS PR00605 Class IC cytochrome C signature 79 101 6.6E-5 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 DA442_00570 15d956aac024caf43a9d7a215134baf2 205 PRINTS PR00605 Class IC cytochrome C signature 30 41 6.6E-5 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 DA442_00570 15d956aac024caf43a9d7a215134baf2 205 PIRSF PIRSF000005 1 205 1.4E-66 T 14-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 DA442_00570 15d956aac024caf43a9d7a215134baf2 205 SUPERFAMILY SSF46626 114 203 3.25E-20 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_08165 c0758b0da8e7a76f56f8b6e890d1a162 299 Pfam PF15575 Immunity protein 49 69 283 2.2E-42 T 14-10-2018 IPR029074 Immunity protein 49 DA442_02955 63682423614ce8271673d42018fafffa 432 SUPERFAMILY SSF47384 192 271 1.55E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DA442_02955 63682423614ce8271673d42018fafffa 432 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 99 203 7.5E-6 T 14-10-2018 IPR000014 PAS domain DA442_02955 63682423614ce8271673d42018fafffa 432 Gene3D G3DSA:1.10.287.130 202 272 2.7E-20 T 14-10-2018 DA442_02955 63682423614ce8271673d42018fafffa 432 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 424 2.6E-138 T 14-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 DA442_02955 63682423614ce8271673d42018fafffa 432 Pfam PF00989 PAS fold 99 165 6.1E-8 T 14-10-2018 IPR013767 PAS fold GO:0006355 DA442_02955 63682423614ce8271673d42018fafffa 432 SMART SM00091 98 166 3.4E-6 T 14-10-2018 IPR000014 PAS domain DA442_02955 63682423614ce8271673d42018fafffa 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 2.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_02955 63682423614ce8271673d42018fafffa 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 2.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_02955 63682423614ce8271673d42018fafffa 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 2.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_02955 63682423614ce8271673d42018fafffa 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 2.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_02955 63682423614ce8271673d42018fafffa 432 Gene3D G3DSA:3.30.565.10 281 429 3.4E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_02955 63682423614ce8271673d42018fafffa 432 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 271 4.2E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_02955 63682423614ce8271673d42018fafffa 432 SMART SM00388 205 272 1.7E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_02955 63682423614ce8271673d42018fafffa 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 317 427 6.6E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_02955 63682423614ce8271673d42018fafffa 432 SUPERFAMILY SSF55874 261 427 3.27E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_02955 63682423614ce8271673d42018fafffa 432 SUPERFAMILY SSF55785 86 196 1.15E-11 T 14-10-2018 IPR035965 PAS domain superfamily DA442_02955 63682423614ce8271673d42018fafffa 432 Pfam PF11808 Domain of unknown function (DUF3329) 7 91 4.5E-31 T 14-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 DA442_02955 63682423614ce8271673d42018fafffa 432 SMART SM00387 317 429 3.4E-33 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_02955 63682423614ce8271673d42018fafffa 432 Gene3D G3DSA:3.30.450.20 85 201 5.2E-10 T 14-10-2018 DA442_19035 7d0fc0263d179a5eadebc7f2d5faaa6e 1054 Gene3D G3DSA:3.10.50.10 720 763 8.7E-12 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily DA442_19035 7d0fc0263d179a5eadebc7f2d5faaa6e 1054 ProSitePatterns PS01095 Chitinases family 18 active site. 471 479 - T 14-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 DA442_19035 7d0fc0263d179a5eadebc7f2d5faaa6e 1054 Pfam PF06483 Chitinase C 810 975 2.2E-72 T 14-10-2018 IPR009470 Chitinase, C-terminal KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 DA442_19035 7d0fc0263d179a5eadebc7f2d5faaa6e 1054 Gene3D G3DSA:3.20.20.80 764 785 8.7E-12 T 14-10-2018 DA442_19035 7d0fc0263d179a5eadebc7f2d5faaa6e 1054 Pfam PF14600 Cellulose-binding domain 999 1051 6.9E-17 T 14-10-2018 IPR032798 Endoglucanase Z, cellulose-binding domain KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 DA442_19035 7d0fc0263d179a5eadebc7f2d5faaa6e 1054 SUPERFAMILY SSF51055 22 86 6.93E-18 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 DA442_19035 7d0fc0263d179a5eadebc7f2d5faaa6e 1054 SMART SM00636 322 782 7.4E-123 T 14-10-2018 IPR011583 Chitinase II GO:0008061 DA442_19035 7d0fc0263d179a5eadebc7f2d5faaa6e 1054 SUPERFAMILY SSF54556 629 752 1.79E-14 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily DA442_19035 7d0fc0263d179a5eadebc7f2d5faaa6e 1054 Gene3D G3DSA:2.10.10.20 16 88 8.4E-17 T 14-10-2018 DA442_19035 7d0fc0263d179a5eadebc7f2d5faaa6e 1054 Gene3D G3DSA:3.20.20.80 304 651 7.2E-81 T 14-10-2018 DA442_19035 7d0fc0263d179a5eadebc7f2d5faaa6e 1054 Pfam PF00704 Glycosyl hydrolases family 18 323 782 9.9E-87 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 DA442_19035 7d0fc0263d179a5eadebc7f2d5faaa6e 1054 Gene3D G3DSA:2.60.40.10 198 285 8.1E-19 T 14-10-2018 IPR013783 Immunoglobulin-like fold DA442_19035 7d0fc0263d179a5eadebc7f2d5faaa6e 1054 SMART SM00495 1009 1051 2.6E-9 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 DA442_19035 7d0fc0263d179a5eadebc7f2d5faaa6e 1054 SMART SM00495 37 82 1.1E-14 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 DA442_19035 7d0fc0263d179a5eadebc7f2d5faaa6e 1054 SUPERFAMILY SSF51055 996 1053 3.01E-15 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 DA442_19035 7d0fc0263d179a5eadebc7f2d5faaa6e 1054 Gene3D G3DSA:2.10.10.20 994 1053 2.0E-19 T 14-10-2018 DA442_19035 7d0fc0263d179a5eadebc7f2d5faaa6e 1054 Gene3D G3DSA:2.60.40.10 98 190 8.4E-25 T 14-10-2018 IPR013783 Immunoglobulin-like fold DA442_19035 7d0fc0263d179a5eadebc7f2d5faaa6e 1054 SUPERFAMILY SSF51445 316 786 2.61E-75 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DA442_13130 aafff50b9405a120d5255afb0bb0e0d5 308 Pfam PF03466 LysR substrate binding domain 90 294 8.8E-50 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_13130 aafff50b9405a120d5255afb0bb0e0d5 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 3.2E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_13130 aafff50b9405a120d5255afb0bb0e0d5 308 SUPERFAMILY SSF53850 92 296 6.52E-44 T 14-10-2018 DA442_13130 aafff50b9405a120d5255afb0bb0e0d5 308 SUPERFAMILY SSF46785 5 114 4.42E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_13130 aafff50b9405a120d5255afb0bb0e0d5 308 Gene3D G3DSA:3.40.190.290 94 296 2.9E-37 T 14-10-2018 DA442_13130 aafff50b9405a120d5255afb0bb0e0d5 308 Gene3D G3DSA:1.10.10.10 4 92 4.2E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_00410 d868e2c4104b7fdf3457c06410874bc3 107 Pfam PF10625 Universal stress protein B (UspB) 1 106 1.8E-51 T 14-10-2018 IPR019598 Universal stress protein B DA442_00410 d868e2c4104b7fdf3457c06410874bc3 107 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 39.364 T 14-10-2018 IPR019598 Universal stress protein B DA442_03405 c1e8813cceae813118ca9f2838978a5e 174 SUPERFAMILY SSF53927 5 159 1.2E-55 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 DA442_03405 c1e8813cceae813118ca9f2838978a5e 174 Gene3D G3DSA:3.40.140.10 3 169 1.0E-62 T 14-10-2018 DA442_03405 c1e8813cceae813118ca9f2838978a5e 174 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 59 96 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 DA442_03405 c1e8813cceae813118ca9f2838978a5e 174 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 14 155 44.875 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 DA442_03405 c1e8813cceae813118ca9f2838978a5e 174 Pfam PF14437 MafB19-like deaminase 10 155 4.0E-31 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 DA442_12085 f0b7e0c323d1c0a281ea40ae82341983 713 Gene3D G3DSA:1.20.272.10 242 361 9.3E-40 T 14-10-2018 DA442_12085 f0b7e0c323d1c0a281ea40ae82341983 713 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 572 710 2.7E-50 T 14-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_12085 f0b7e0c323d1c0a281ea40ae82341983 713 SMART SM00382 37 179 1.4E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_12085 f0b7e0c323d1c0a281ea40ae82341983 713 Gene3D G3DSA:3.40.50.300 13 177 2.8E-101 T 14-10-2018 DA442_12085 f0b7e0c323d1c0a281ea40ae82341983 713 SUPERFAMILY SSF52540 32 222 2.12E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_12085 f0b7e0c323d1c0a281ea40ae82341983 713 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 359 2.7E-32 T 14-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 DA442_12085 f0b7e0c323d1c0a281ea40ae82341983 713 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 493 570 3.0E-23 T 14-10-2018 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_12085 f0b7e0c323d1c0a281ea40ae82341983 713 Gene3D G3DSA:3.30.300.150 570 695 2.3E-40 T 14-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_12085 f0b7e0c323d1c0a281ea40ae82341983 713 SUPERFAMILY SSF48019 243 360 2.55E-32 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 DA442_12085 f0b7e0c323d1c0a281ea40ae82341983 713 Pfam PF13177 DNA polymerase III, delta subunit 20 178 7.6E-44 T 14-10-2018 DA442_12085 f0b7e0c323d1c0a281ea40ae82341983 713 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 1.4E-132 T 14-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 DA442_12085 f0b7e0c323d1c0a281ea40ae82341983 713 Gene3D G3DSA:1.10.8.60 8 240 2.8E-101 T 14-10-2018 DA442_19890 270a2ccb5b132752ef9d38437ce4092b 553 Gene3D G3DSA:3.40.50.300 8 228 4.8E-60 T 14-10-2018 DA442_19890 270a2ccb5b132752ef9d38437ce4092b 553 Gene3D G3DSA:1.10.8.300 229 301 1.9E-25 T 14-10-2018 DA442_19890 270a2ccb5b132752ef9d38437ce4092b 553 SUPERFAMILY SSF52540 18 294 1.07E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_19890 270a2ccb5b132752ef9d38437ce4092b 553 Pfam PF12592 Protein of unknown function (DUF3763) 483 535 1.3E-19 T 14-10-2018 IPR022547 ATPase, RavA, C-terminal GO:0042626 DA442_19890 270a2ccb5b132752ef9d38437ce4092b 553 Pfam PF07728 AAA domain (dynein-related subfamily) 49 179 1.9E-22 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 DA442_19890 270a2ccb5b132752ef9d38437ce4092b 553 SMART SM00382 46 189 1.1E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_01485 995258917665b7f2c876eb4d7e2c5d48 179 PIRSF PIRSF002161 1 179 5.5E-67 T 14-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01485 995258917665b7f2c876eb4d7e2c5d48 179 Gene3D G3DSA:3.30.1440.10 1 179 6.4E-81 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01485 995258917665b7f2c876eb4d7e2c5d48 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 7.1E-41 T 14-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01485 995258917665b7f2c876eb4d7e2c5d48 179 Pfam PF00281 Ribosomal protein L5 24 80 2.4E-29 T 14-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01485 995258917665b7f2c876eb4d7e2c5d48 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 45.054 T 14-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_01485 995258917665b7f2c876eb4d7e2c5d48 179 SUPERFAMILY SSF55282 4 179 1.44E-78 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01485 995258917665b7f2c876eb4d7e2c5d48 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 14-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_21280 5694850fbc177f4c25661f721e474b34 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 5.8E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DA442_21280 5694850fbc177f4c25661f721e474b34 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 5.8E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DA442_21280 5694850fbc177f4c25661f721e474b34 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 5.8E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DA442_21280 5694850fbc177f4c25661f721e474b34 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 5.8E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DA442_21280 5694850fbc177f4c25661f721e474b34 138 SUPERFAMILY SSF46785 6 136 8.67E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_21280 5694850fbc177f4c25661f721e474b34 138 SMART SM00347 24 124 3.4E-21 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DA442_21280 5694850fbc177f4c25661f721e474b34 138 Pfam PF01047 MarR family 32 88 4.8E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DA442_21280 5694850fbc177f4c25661f721e474b34 138 Gene3D G3DSA:1.10.10.10 1 137 9.0E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_06100 1575980bb34aab1b116fa157b24743a1 351 Pfam PF00970 Oxidoreductase FAD-binding domain 17 108 7.8E-16 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 DA442_06100 1575980bb34aab1b116fa157b24743a1 351 SUPERFAMILY SSF52343 118 253 6.55E-31 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DA442_06100 1575980bb34aab1b116fa157b24743a1 351 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 300 308 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 DA442_06100 1575980bb34aab1b116fa157b24743a1 351 Gene3D G3DSA:2.40.30.10 5 109 2.5E-24 T 14-10-2018 DA442_06100 1575980bb34aab1b116fa157b24743a1 351 Pfam PF00175 Oxidoreductase NAD-binding domain 126 233 8.7E-13 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 DA442_06100 1575980bb34aab1b116fa157b24743a1 351 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 275 341 5.8E-11 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DA442_06100 1575980bb34aab1b116fa157b24743a1 351 PRINTS PR00410 Phenol hydroxylase reductase family signature 125 144 1.9E-5 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DA442_06100 1575980bb34aab1b116fa157b24743a1 351 PRINTS PR00410 Phenol hydroxylase reductase family signature 41 53 1.9E-5 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DA442_06100 1575980bb34aab1b116fa157b24743a1 351 PRINTS PR00410 Phenol hydroxylase reductase family signature 219 227 1.9E-5 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DA442_06100 1575980bb34aab1b116fa157b24743a1 351 SUPERFAMILY SSF54292 242 350 5.37E-23 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DA442_06100 1575980bb34aab1b116fa157b24743a1 351 Gene3D G3DSA:3.10.20.30 264 351 5.9E-21 T 14-10-2018 IPR012675 Beta-grasp domain superfamily DA442_06100 1575980bb34aab1b116fa157b24743a1 351 SUPERFAMILY SSF63380 4 110 2.79E-27 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DA442_06100 1575980bb34aab1b116fa157b24743a1 351 Gene3D G3DSA:3.40.50.80 115 258 1.7E-29 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DA442_08425 d9fcaf9731d071538b8a8cf093f80e6e 478 SUPERFAMILY SSF53335 7 308 4.78E-63 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_08425 d9fcaf9731d071538b8a8cf093f80e6e 478 Pfam PF01189 16S rRNA methyltransferase RsmB/F 111 306 1.5E-49 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 DA442_08425 d9fcaf9731d071538b8a8cf093f80e6e 478 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 5 478 65.86 T 14-10-2018 IPR023545 rRNA small subunit methyltransferase F GO:0008649 DA442_08425 d9fcaf9731d071538b8a8cf093f80e6e 478 Gene3D G3DSA:2.30.130.90 310 478 1.2E-66 T 14-10-2018 DA442_08425 d9fcaf9731d071538b8a8cf093f80e6e 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 120 130 7.7E-28 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DA442_08425 d9fcaf9731d071538b8a8cf093f80e6e 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 187 199 7.7E-28 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DA442_08425 d9fcaf9731d071538b8a8cf093f80e6e 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 291 308 7.7E-28 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DA442_08425 d9fcaf9731d071538b8a8cf093f80e6e 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 237 253 7.7E-28 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DA442_08425 d9fcaf9731d071538b8a8cf093f80e6e 478 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 89 103 7.7E-28 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DA442_08425 d9fcaf9731d071538b8a8cf093f80e6e 478 Gene3D G3DSA:3.40.50.150 2 308 1.4E-98 T 14-10-2018 DA442_08425 d9fcaf9731d071538b8a8cf093f80e6e 478 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 186 197 - T 14-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 DA442_08425 d9fcaf9731d071538b8a8cf093f80e6e 478 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 7 103 7.4E-29 T 14-10-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 DA442_08425 d9fcaf9731d071538b8a8cf093f80e6e 478 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 420 473 1.2E-9 T 14-10-2018 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain DA442_08425 d9fcaf9731d071538b8a8cf093f80e6e 478 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 40 308 8.8E-102 T 14-10-2018 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 DA442_15960 ccbcee287c862b3e31e77490dd630ec0 429 Pfam PF01926 50S ribosome-binding GTPase 200 318 2.9E-21 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DA442_15960 ccbcee287c862b3e31e77490dd630ec0 429 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 1.9E-28 T 14-10-2018 IPR032305 GTP-binding protein, middle domain DA442_15960 ccbcee287c862b3e31e77490dd630ec0 429 Hamap MF_00900 GTPase HflX [hflX]. 27 390 48.195 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 DA442_15960 ccbcee287c862b3e31e77490dd630ec0 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 8.9E-10 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DA442_15960 ccbcee287c862b3e31e77490dd630ec0 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 8.9E-10 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DA442_15960 ccbcee287c862b3e31e77490dd630ec0 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 8.9E-10 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DA442_15960 ccbcee287c862b3e31e77490dd630ec0 429 Gene3D G3DSA:3.40.50.300 197 371 7.3E-43 T 14-10-2018 DA442_15960 ccbcee287c862b3e31e77490dd630ec0 429 PIRSF PIRSF006809 3 423 4.4E-151 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 DA442_15960 ccbcee287c862b3e31e77490dd630ec0 429 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 8.1E-31 T 14-10-2018 IPR025121 GTPase HflX, N-terminal DA442_15960 ccbcee287c862b3e31e77490dd630ec0 429 SUPERFAMILY SSF54980 364 428 7.91E-19 T 14-10-2018 IPR035647 EF-G domain III/V-like DA442_15960 ccbcee287c862b3e31e77490dd630ec0 429 SUPERFAMILY SSF52540 197 372 5.03E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_15960 ccbcee287c862b3e31e77490dd630ec0 429 Gene3D G3DSA:3.40.50.11060 18 138 5.1E-37 T 14-10-2018 DA442_15960 ccbcee287c862b3e31e77490dd630ec0 429 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 1.6E-156 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 DA442_04205 491471be5d7e2e61178bb1b9f1bb8365 670 Hamap MF_01588 DNA ligase [ligA]. 3 669 54.181 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 DA442_04205 491471be5d7e2e61178bb1b9f1bb8365 670 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 408 435 3.3E-12 T 14-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 DA442_04205 491471be5d7e2e61178bb1b9f1bb8365 670 Gene3D G3DSA:1.10.150.20 507 585 1.3E-29 T 14-10-2018 DA442_04205 491471be5d7e2e61178bb1b9f1bb8365 670 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 323 399 1.2E-35 T 14-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 DA442_04205 491471be5d7e2e61178bb1b9f1bb8365 670 SMART SM00532 4 449 1.4E-280 T 14-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 DA442_04205 491471be5d7e2e61178bb1b9f1bb8365 670 Gene3D G3DSA:2.40.50.140 319 391 2.4E-34 T 14-10-2018 DA442_04205 491471be5d7e2e61178bb1b9f1bb8365 670 Pfam PF14520 Helix-hairpin-helix domain 447 503 6.0E-6 T 14-10-2018 DA442_04205 491471be5d7e2e61178bb1b9f1bb8365 670 Gene3D G3DSA:3.30.470.90 70 318 1.7E-102 T 14-10-2018 DA442_04205 491471be5d7e2e61178bb1b9f1bb8365 670 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 4 319 5.0E-135 T 14-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 DA442_04205 491471be5d7e2e61178bb1b9f1bb8365 670 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 12 665 3.7E-266 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 DA442_04205 491471be5d7e2e61178bb1b9f1bb8365 670 Gene3D G3DSA:3.40.50.10190 586 670 6.4E-28 T 14-10-2018 IPR036420 BRCT domain superfamily DA442_04205 491471be5d7e2e61178bb1b9f1bb8365 670 Gene3D G3DSA:2.20.70.80 392 432 9.7E-21 T 14-10-2018 DA442_04205 491471be5d7e2e61178bb1b9f1bb8365 670 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 116 145 - T 14-10-2018 IPR018239 NAD-dependent DNA ligase, active site DA442_04205 491471be5d7e2e61178bb1b9f1bb8365 670 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 595 669 1.8E-14 T 14-10-2018 IPR001357 BRCT domain DA442_04205 491471be5d7e2e61178bb1b9f1bb8365 670 SUPERFAMILY SSF56091 4 317 1.6E-125 T 14-10-2018 DA442_04205 491471be5d7e2e61178bb1b9f1bb8365 670 SUPERFAMILY SSF52113 595 670 1.42E-18 T 14-10-2018 IPR036420 BRCT domain superfamily DA442_04205 491471be5d7e2e61178bb1b9f1bb8365 670 PIRSF PIRSF001604 1 670 7.1E-257 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 DA442_04205 491471be5d7e2e61178bb1b9f1bb8365 670 SMART SM00278 545 564 720.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DA442_04205 491471be5d7e2e61178bb1b9f1bb8365 670 SMART SM00278 447 466 95.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DA442_04205 491471be5d7e2e61178bb1b9f1bb8365 670 SMART SM00278 481 500 6.7 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DA442_04205 491471be5d7e2e61178bb1b9f1bb8365 670 SMART SM00292 595 670 6.1E-11 T 14-10-2018 IPR001357 BRCT domain DA442_04205 491471be5d7e2e61178bb1b9f1bb8365 670 Gene3D G3DSA:1.10.150.20 433 505 9.2E-30 T 14-10-2018 DA442_04205 491471be5d7e2e61178bb1b9f1bb8365 670 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 332 347 - T 14-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site DA442_04205 491471be5d7e2e61178bb1b9f1bb8365 670 SUPERFAMILY SSF47781 404 585 2.74E-61 T 14-10-2018 IPR010994 RuvA domain 2-like DA442_04205 491471be5d7e2e61178bb1b9f1bb8365 670 Gene3D G3DSA:1.10.287.610 2 69 7.9E-29 T 14-10-2018 DA442_04205 491471be5d7e2e61178bb1b9f1bb8365 670 Pfam PF12826 Helix-hairpin-helix motif 511 574 6.5E-24 T 14-10-2018 DA442_04205 491471be5d7e2e61178bb1b9f1bb8365 670 SUPERFAMILY SSF50249 319 400 1.56E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_22745 2d3396f576f00df9c91e63aeb5ac75c2 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 227 2.7E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DA442_22745 2d3396f576f00df9c91e63aeb5ac75c2 235 Gene3D G3DSA:3.40.50.2300 1 121 1.0E-41 T 14-10-2018 DA442_22745 2d3396f576f00df9c91e63aeb5ac75c2 235 SUPERFAMILY SSF52172 2 131 3.42E-45 T 14-10-2018 IPR011006 CheY-like superfamily DA442_22745 2d3396f576f00df9c91e63aeb5ac75c2 235 SMART SM00448 4 114 8.3E-48 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_22745 2d3396f576f00df9c91e63aeb5ac75c2 235 SMART SM00862 152 227 1.8E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DA442_22745 2d3396f576f00df9c91e63aeb5ac75c2 235 Pfam PF00072 Response regulator receiver domain 6 115 3.8E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_22745 2d3396f576f00df9c91e63aeb5ac75c2 235 SUPERFAMILY SSF46894 132 229 1.05E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DA442_22745 2d3396f576f00df9c91e63aeb5ac75c2 235 Gene3D G3DSA:1.10.10.10 122 232 1.9E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_18450 b65d7383f88fd09feaf7e185b1c27191 1020 ProSitePatterns PS00018 EF-hand calcium-binding domain. 253 265 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site DA442_18450 b65d7383f88fd09feaf7e185b1c27191 1020 Pfam PF05547 Immune inhibitor A peptidase M6 171 385 6.0E-16 T 14-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 DA442_18450 b65d7383f88fd09feaf7e185b1c27191 1020 Gene3D G3DSA:2.60.40.10 890 972 2.0E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold DA442_18450 b65d7383f88fd09feaf7e185b1c27191 1020 SUPERFAMILY SSF55486 305 375 6.9E-7 T 14-10-2018 DA442_18450 b65d7383f88fd09feaf7e185b1c27191 1020 PIRSF PIRSF036597 965 1020 1.5E-5 T 14-10-2018 IPR012045 Peptidase M6, unassigned InhA-related DA442_18450 b65d7383f88fd09feaf7e185b1c27191 1020 PIRSF PIRSF036597 10 979 0.0 T 14-10-2018 IPR012045 Peptidase M6, unassigned InhA-related DA442_18450 b65d7383f88fd09feaf7e185b1c27191 1020 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 154 441 1.5E-78 T 14-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 DA442_14035 37aaf7fda8e4cb8bdcca023778366716 341 Gene3D G3DSA:1.10.3720.10 94 303 1.3E-15 T 14-10-2018 IPR035906 MetI-like superfamily DA442_14035 37aaf7fda8e4cb8bdcca023778366716 341 SUPERFAMILY SSF161098 96 288 4.97E-20 T 14-10-2018 IPR035906 MetI-like superfamily DA442_14035 37aaf7fda8e4cb8bdcca023778366716 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 305 1.1E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DA442_02165 1998b6460a375835bd0448efa920c481 511 Gene3D G3DSA:2.40.320.10 1 204 2.7E-35 T 14-10-2018 DA442_02165 1998b6460a375835bd0448efa920c481 511 Pfam PF05235 CHAD domain 236 420 4.9E-8 T 14-10-2018 IPR007899 CHAD domain DA442_02165 1998b6460a375835bd0448efa920c481 511 SMART SM01118 2 208 1.4E-42 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 DA442_02165 1998b6460a375835bd0448efa920c481 511 SUPERFAMILY SSF55154 1 224 3.6E-51 T 14-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 DA442_02165 1998b6460a375835bd0448efa920c481 511 SMART SM00880 234 502 3.8E-19 T 14-10-2018 IPR007899 CHAD domain DA442_02165 1998b6460a375835bd0448efa920c481 511 Gene3D G3DSA:1.40.20.10 217 435 2.5E-10 T 14-10-2018 IPR038186 CHAD domain superfamily DA442_02165 1998b6460a375835bd0448efa920c481 511 Pfam PF01928 CYTH domain 3 202 5.7E-32 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 DA442_12280 1e3e613abe17e38b1667cf42f630872c 161 Gene3D G3DSA:1.10.8.640 20 105 2.3E-36 T 14-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily DA442_12280 1e3e613abe17e38b1667cf42f630872c 161 Pfam PF03918 Cytochrome C biogenesis protein 9 152 4.4E-55 T 14-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family DA442_23805 ca5ee1a0f2fc4d9abb2957f553a3ddc4 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 2.4E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_23805 ca5ee1a0f2fc4d9abb2957f553a3ddc4 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 2.4E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_23805 ca5ee1a0f2fc4d9abb2957f553a3ddc4 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 2.4E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_23805 ca5ee1a0f2fc4d9abb2957f553a3ddc4 243 SUPERFAMILY SSF51735 2 242 3.19E-81 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_23805 ca5ee1a0f2fc4d9abb2957f553a3ddc4 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 3.0E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_23805 ca5ee1a0f2fc4d9abb2957f553a3ddc4 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 3.0E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_23805 ca5ee1a0f2fc4d9abb2957f553a3ddc4 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 3.0E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_23805 ca5ee1a0f2fc4d9abb2957f553a3ddc4 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.0E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_23805 ca5ee1a0f2fc4d9abb2957f553a3ddc4 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 3.0E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_23805 ca5ee1a0f2fc4d9abb2957f553a3ddc4 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 3.0E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_23805 ca5ee1a0f2fc4d9abb2957f553a3ddc4 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 242 1.7E-62 T 14-10-2018 DA442_23805 ca5ee1a0f2fc4d9abb2957f553a3ddc4 243 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 174 0.0011 T 14-10-2018 DA442_23805 ca5ee1a0f2fc4d9abb2957f553a3ddc4 243 Gene3D G3DSA:3.40.50.720 1 243 1.2E-82 T 14-10-2018 DA442_21940 59519cd83dfa9f8e8a2b32fb5cca2642 115 SUPERFAMILY SSF47413 8 87 9.29E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DA442_21940 59519cd83dfa9f8e8a2b32fb5cca2642 115 Gene3D G3DSA:1.10.260.40 3 89 1.1E-9 T 14-10-2018 DA442_21940 59519cd83dfa9f8e8a2b32fb5cca2642 115 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 20 70 4.1E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DA442_10050 f11df59f3bd1755d1876d079fc01ed7a 182 SUPERFAMILY SSF55729 12 177 1.08E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_10050 f11df59f3bd1755d1876d079fc01ed7a 182 Gene3D G3DSA:3.40.630.30 6 182 7.1E-19 T 14-10-2018 DA442_10050 f11df59f3bd1755d1876d079fc01ed7a 182 Pfam PF00583 Acetyltransferase (GNAT) family 40 155 1.1E-8 T 14-10-2018 IPR000182 GNAT domain DA442_14575 747bb0e17edb8b24f33cb6c519ee93b1 212 Gene3D G3DSA:1.10.10.880 6 71 5.0E-25 T 14-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 DA442_14575 747bb0e17edb8b24f33cb6c519ee93b1 212 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 144 195 1.4E-19 T 14-10-2018 IPR005573 Anti sigma-E protein RseA, C-terminal DA442_14575 747bb0e17edb8b24f33cb6c519ee93b1 212 PIRSF PIRSF016938 3 206 1.6E-34 T 14-10-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0016989 DA442_14575 747bb0e17edb8b24f33cb6c519ee93b1 212 SUPERFAMILY SSF89069 8 71 2.75E-21 T 14-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 DA442_14575 747bb0e17edb8b24f33cb6c519ee93b1 212 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 5 103 7.8E-35 T 14-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 DA442_16080 6a8fa65be5081f4e46eb5604e247d139 626 Gene3D G3DSA:1.10.287.950 294 626 2.9E-69 T 14-10-2018 DA442_16080 6a8fa65be5081f4e46eb5604e247d139 626 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 436 590 2.5E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_16080 6a8fa65be5081f4e46eb5604e247d139 626 SUPERFAMILY SSF103190 64 175 6.28E-11 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily DA442_16080 6a8fa65be5081f4e46eb5604e247d139 626 SUPERFAMILY SSF58104 317 626 5.75E-73 T 14-10-2018 DA442_16080 6a8fa65be5081f4e46eb5604e247d139 626 SMART SM00304 295 349 9.6E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_16080 6a8fa65be5081f4e46eb5604e247d139 626 Gene3D G3DSA:3.30.450.20 64 167 4.5E-54 T 14-10-2018 DA442_16080 6a8fa65be5081f4e46eb5604e247d139 626 Pfam PF02743 Cache domain 38 258 6.6E-26 T 14-10-2018 IPR033479 Double Cache domain 1 DA442_16080 6a8fa65be5081f4e46eb5604e247d139 626 Pfam PF00672 HAMP domain 296 344 6.2E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_16080 6a8fa65be5081f4e46eb5604e247d139 626 SMART SM00283 364 625 1.7E-65 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_16080 6a8fa65be5081f4e46eb5604e247d139 626 Gene3D G3DSA:3.30.450.20 51 269 4.5E-54 T 14-10-2018 DA442_16280 e1b83be9925fdbd2b55f0369e3ca414f 209 Gene3D G3DSA:3.40.50.2300 3 132 3.7E-27 T 14-10-2018 DA442_16280 e1b83be9925fdbd2b55f0369e3ca414f 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_16280 e1b83be9925fdbd2b55f0369e3ca414f 209 Pfam PF00072 Response regulator receiver domain 7 120 6.2E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_16280 e1b83be9925fdbd2b55f0369e3ca414f 209 SMART SM00448 5 119 4.9E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_16280 e1b83be9925fdbd2b55f0369e3ca414f 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 3.6E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_16280 e1b83be9925fdbd2b55f0369e3ca414f 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 3.6E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_16280 e1b83be9925fdbd2b55f0369e3ca414f 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 3.6E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_16280 e1b83be9925fdbd2b55f0369e3ca414f 209 SMART SM00421 147 204 5.0E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_16280 e1b83be9925fdbd2b55f0369e3ca414f 209 SUPERFAMILY SSF52172 4 173 7.55E-27 T 14-10-2018 IPR011006 CheY-like superfamily DA442_16280 e1b83be9925fdbd2b55f0369e3ca414f 209 Gene3D G3DSA:1.10.10.10 148 209 1.2E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_16280 e1b83be9925fdbd2b55f0369e3ca414f 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 2.8E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_04340 828c96f2ab820d653a88871782fe8340 529 Gene3D G3DSA:1.20.1530.20 2 361 5.1E-46 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily DA442_04340 828c96f2ab820d653a88871782fe8340 529 SUPERFAMILY SSF51735 387 517 3.38E-15 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_04340 828c96f2ab820d653a88871782fe8340 529 Pfam PF00999 Sodium/hydrogen exchanger family 3 349 1.9E-40 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 DA442_04340 828c96f2ab820d653a88871782fe8340 529 Gene3D G3DSA:3.40.50.720 379 529 3.5E-34 T 14-10-2018 DA442_04340 828c96f2ab820d653a88871782fe8340 529 Pfam PF02254 TrkA-N domain 388 504 6.0E-19 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 DA442_07610 031d852401e763a7b18b03f90b91d90a 203 SUPERFAMILY SSF56925 66 164 9.94E-6 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DA442_07610 031d852401e763a7b18b03f90b91d90a 203 Gene3D G3DSA:2.40.160.20 32 177 1.2E-5 T 14-10-2018 DA442_21070 284e9b9421bd46a007923c32c9c8a292 149 Gene3D G3DSA:3.30.70.920 58 144 8.9E-13 T 14-10-2018 DA442_21070 284e9b9421bd46a007923c32c9c8a292 149 SUPERFAMILY SSF54909 62 142 1.19E-13 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel DA442_21070 284e9b9421bd46a007923c32c9c8a292 149 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 2.7E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DA442_21070 284e9b9421bd46a007923c32c9c8a292 149 SUPERFAMILY SSF46785 1 56 1.99E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_21070 284e9b9421bd46a007923c32c9c8a292 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 8.6E-12 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DA442_21070 284e9b9421bd46a007923c32c9c8a292 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 8.6E-12 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DA442_21070 284e9b9421bd46a007923c32c9c8a292 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 8.6E-12 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DA442_21070 284e9b9421bd46a007923c32c9c8a292 149 SMART SM00344 1 110 1.4E-20 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DA442_21070 284e9b9421bd46a007923c32c9c8a292 149 Pfam PF01037 Lrp/AsnC ligand binding domain 78 139 2.1E-12 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DA442_21070 284e9b9421bd46a007923c32c9c8a292 149 Gene3D G3DSA:1.10.10.10 1 52 2.2E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_02335 321c0907711977765f496b21cd5e2087 597 SUPERFAMILY SSF56519 86 258 5.23E-46 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 DA442_02335 321c0907711977765f496b21cd5e2087 597 Gene3D G3DSA:3.30.450.330 260 584 1.3E-103 T 14-10-2018 DA442_02335 321c0907711977765f496b21cd5e2087 597 Gene3D G3DSA:3.90.1310.30 83 258 4.2E-46 T 14-10-2018 DA442_02335 321c0907711977765f496b21cd5e2087 597 Pfam PF03717 Penicillin-binding Protein dimerisation domain 91 245 3.1E-20 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 DA442_02335 321c0907711977765f496b21cd5e2087 597 SUPERFAMILY SSF56601 260 591 1.99E-91 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DA442_02335 321c0907711977765f496b21cd5e2087 597 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 43 595 44.788 T 14-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DA442_02335 321c0907711977765f496b21cd5e2087 597 Gene3D G3DSA:3.40.710.10 320 502 1.3E-103 T 14-10-2018 DA442_02335 321c0907711977765f496b21cd5e2087 597 Pfam PF00905 Penicillin binding protein transpeptidase domain 284 580 4.2E-75 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DA442_13720 b8ac737bdeea298218028ebe475d7311 1212 SUPERFAMILY SSF53335 72 677 2.33E-68 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_13720 b8ac737bdeea298218028ebe475d7311 1212 Pfam PF02384 N-6 DNA Methylase 496 614 9.8E-9 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 DA442_13720 b8ac737bdeea298218028ebe475d7311 1212 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 238 254 4.1E-12 T 14-10-2018 DA442_13720 b8ac737bdeea298218028ebe475d7311 1212 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 304 318 4.1E-12 T 14-10-2018 DA442_13720 b8ac737bdeea298218028ebe475d7311 1212 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 533 557 4.1E-12 T 14-10-2018 DA442_13720 b8ac737bdeea298218028ebe475d7311 1212 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 500 512 4.1E-12 T 14-10-2018 DA442_13720 b8ac737bdeea298218028ebe475d7311 1212 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 503 509 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DA442_24260 4e27b0f5779152ef166d14081b9b979d 380 Pfam PF01625 Peptide methionine sulfoxide reductase 43 193 1.8E-57 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DA442_24260 4e27b0f5779152ef166d14081b9b979d 380 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 238 371 4.0E-58 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 DA442_24260 4e27b0f5779152ef166d14081b9b979d 380 SUPERFAMILY SSF51316 239 379 1.26E-58 T 14-10-2018 IPR011057 Mss4-like superfamily DA442_24260 4e27b0f5779152ef166d14081b9b979d 380 Gene3D G3DSA:3.30.1060.10 26 210 3.9E-63 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DA442_24260 4e27b0f5779152ef166d14081b9b979d 380 Pfam PF01641 SelR domain 244 362 4.6E-46 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 DA442_24260 4e27b0f5779152ef166d14081b9b979d 380 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 237 363 35.146 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 DA442_24260 4e27b0f5779152ef166d14081b9b979d 380 SUPERFAMILY SSF55068 32 205 5.89E-72 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DA442_24260 4e27b0f5779152ef166d14081b9b979d 380 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 40 199 35.692 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DA442_24260 4e27b0f5779152ef166d14081b9b979d 380 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 41 192 6.1E-52 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DA442_24260 4e27b0f5779152ef166d14081b9b979d 380 Gene3D G3DSA:2.170.150.20 233 380 1.1E-55 T 14-10-2018 DA442_05225 d49b243ab24c400d930cc54376644cb2 258 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 51 64 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site DA442_05225 d49b243ab24c400d930cc54376644cb2 258 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 9 251 7.3E-81 T 14-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 DA442_05225 d49b243ab24c400d930cc54376644cb2 258 Gene3D G3DSA:3.40.190.10 114 211 8.5E-72 T 14-10-2018 DA442_05225 d49b243ab24c400d930cc54376644cb2 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 252 9.9E-62 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DA442_05225 d49b243ab24c400d930cc54376644cb2 258 SMART SM00079 28 253 3.8E-4 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 DA442_05225 d49b243ab24c400d930cc54376644cb2 258 SMART SM00062 28 254 8.4E-70 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DA442_05225 d49b243ab24c400d930cc54376644cb2 258 Gene3D G3DSA:3.40.190.10 30 250 8.5E-72 T 14-10-2018 DA442_05225 d49b243ab24c400d930cc54376644cb2 258 SUPERFAMILY SSF53850 3 255 2.35E-69 T 14-10-2018 DA442_08840 96f1fd168b1950e2eb2a663397af0f7c 208 Pfam PF09025 YopR, type III needle-polymerisation regulator 68 208 1.0E-65 T 14-10-2018 IPR013349 Type III secretion system effector YopR GO:0009405|GO:0030254|GO:0030257 DA442_08840 96f1fd168b1950e2eb2a663397af0f7c 208 SUPERFAMILY SSF140591 88 188 2.35E-8 T 14-10-2018 DA442_08840 96f1fd168b1950e2eb2a663397af0f7c 208 TIGRFAM TIGR02509 type_III_yopR: type III secretion effector, YopR family 81 207 1.9E-52 T 14-10-2018 IPR013349 Type III secretion system effector YopR GO:0009405|GO:0030254|GO:0030257 DA442_19090 c604843a70eb1ef0fada3ce1d85a6a8e 476 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 286 439 1.0E-38 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_19090 c604843a70eb1ef0fada3ce1d85a6a8e 476 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 234 263 4.1E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DA442_19090 c604843a70eb1ef0fada3ce1d85a6a8e 476 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 311 338 4.1E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DA442_19090 c604843a70eb1ef0fada3ce1d85a6a8e 476 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 340 369 4.1E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DA442_19090 c604843a70eb1ef0fada3ce1d85a6a8e 476 Gene3D G3DSA:1.10.287.950 149 476 3.8E-66 T 14-10-2018 DA442_19090 c604843a70eb1ef0fada3ce1d85a6a8e 476 SUPERFAMILY SSF58104 165 474 3.01E-66 T 14-10-2018 DA442_19090 c604843a70eb1ef0fada3ce1d85a6a8e 476 SMART SM00283 213 474 1.4E-49 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_02830 c12396daaa9dd101ebdabd47d75487c2 103 Pfam PF01371 Trp repressor protein 9 93 5.0E-33 T 14-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 DA442_02830 c12396daaa9dd101ebdabd47d75487c2 103 SUPERFAMILY SSF48295 2 94 1.1E-28 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 DA442_02830 c12396daaa9dd101ebdabd47d75487c2 103 Gene3D G3DSA:1.10.1270.10 1 98 3.1E-33 T 14-10-2018 IPR038116 TrpR-like superfamily DA442_02830 c12396daaa9dd101ebdabd47d75487c2 103 PIRSF PIRSF003196 1 100 2.2E-39 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 DA442_02830 c12396daaa9dd101ebdabd47d75487c2 103 Hamap MF_00475 Trp operon repressor [trpR]. 6 103 23.815 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 DA442_02830 c12396daaa9dd101ebdabd47d75487c2 103 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 4 78 2.0E-37 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 DA442_02830 c12396daaa9dd101ebdabd47d75487c2 103 TIGRFAM TIGR01321 TrpR: trp operon repressor 6 88 5.7E-25 T 14-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 DA442_24180 5441e7759dc582c6f0af5f477a430506 466 Pfam PF01212 Beta-eliminating lyase 46 431 3.4E-98 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 DA442_24180 5441e7759dc582c6f0af5f477a430506 466 Hamap MF_00544 Tryptophanase [tnaA]. 1 465 106.512 T 14-10-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 DA442_24180 5441e7759dc582c6f0af5f477a430506 466 SUPERFAMILY SSF53383 2 465 2.02E-146 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_24180 5441e7759dc582c6f0af5f477a430506 466 ProSitePatterns PS00853 Beta-eliminating lyases pyridoxal-phosphate attachment site. 255 273 - T 14-10-2018 IPR018176 Tryptophanase, conserved site KEGG: 00380+4.1.99.1 DA442_24180 5441e7759dc582c6f0af5f477a430506 466 Gene3D G3DSA:3.40.640.10 58 326 3.9E-208 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_24180 5441e7759dc582c6f0af5f477a430506 466 PIRSF PIRSF001386 1 466 1.3E-228 T 14-10-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 DA442_24180 5441e7759dc582c6f0af5f477a430506 466 Gene3D G3DSA:3.90.1150.10 6 460 3.9E-208 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DA442_04040 603a969c42c4a251fed996dcdf9b1a81 377 Gene3D G3DSA:2.40.10.410 291 377 8.5E-38 T 14-10-2018 IPR038165 FlgT, C-terminal domain superfamily DA442_04040 603a969c42c4a251fed996dcdf9b1a81 377 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 24 110 1.4E-26 T 14-10-2018 IPR032370 Flagellar assembly protein T, N-terminal DA442_04040 603a969c42c4a251fed996dcdf9b1a81 377 Gene3D G3DSA:3.30.1660.40 24 113 1.3E-36 T 14-10-2018 IPR038180 FlgT, N-terminal domain superfamily DA442_04040 603a969c42c4a251fed996dcdf9b1a81 377 Gene3D G3DSA:3.40.50.10610 114 290 4.4E-58 T 14-10-2018 DA442_04040 603a969c42c4a251fed996dcdf9b1a81 377 Pfam PF16539 Flagellar assembly protein T, middle domain 115 256 3.7E-42 T 14-10-2018 IPR032386 Flagellar assembly protein T, middle domain DA442_04040 603a969c42c4a251fed996dcdf9b1a81 377 Pfam PF16538 Flagellar assembly protein T, C-terminal domain 299 374 1.2E-27 T 14-10-2018 IPR032388 Flagellar assembly protein T, C-terminal DA442_11680 888123810716f86a72571f22cb27096f 315 SUPERFAMILY SSF47616 164 313 1.95E-36 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DA442_11680 888123810716f86a72571f22cb27096f 315 Gene3D G3DSA:1.20.1050.10 167 315 2.8E-70 T 14-10-2018 DA442_11680 888123810716f86a72571f22cb27096f 315 PIRSF PIRSF015753 5 312 1.3E-135 T 14-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 DA442_11680 888123810716f86a72571f22cb27096f 315 SUPERFAMILY SSF52833 31 150 7.61E-17 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_11680 888123810716f86a72571f22cb27096f 315 Pfam PF13410 Glutathione S-transferase, C-terminal domain 192 262 1.4E-12 T 14-10-2018 DA442_11680 888123810716f86a72571f22cb27096f 315 Gene3D G3DSA:3.40.30.130 1 161 4.5E-66 T 14-10-2018 DA442_11680 888123810716f86a72571f22cb27096f 315 Pfam PF13409 Glutathione S-transferase, N-terminal domain 56 146 2.2E-22 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DA442_19140 6f1552391400bc9d95575f09d07bc714 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.8E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_19140 6f1552391400bc9d95575f09d07bc714 301 SUPERFAMILY SSF46785 3 111 2.01E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_19140 6f1552391400bc9d95575f09d07bc714 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_19140 6f1552391400bc9d95575f09d07bc714 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_19140 6f1552391400bc9d95575f09d07bc714 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_19140 6f1552391400bc9d95575f09d07bc714 301 Gene3D G3DSA:1.10.10.10 3 89 4.3E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_19140 6f1552391400bc9d95575f09d07bc714 301 Pfam PF03466 LysR substrate binding domain 90 284 1.7E-42 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_19140 6f1552391400bc9d95575f09d07bc714 301 SUPERFAMILY SSF53850 90 285 3.72E-38 T 14-10-2018 DA442_19140 6f1552391400bc9d95575f09d07bc714 301 Gene3D G3DSA:3.40.190.10 92 277 4.7E-35 T 14-10-2018 DA442_19140 6f1552391400bc9d95575f09d07bc714 301 Gene3D G3DSA:3.40.190.10 165 268 4.7E-35 T 14-10-2018 DA442_03115 8987cb8c1ed553a478cb82bf6a8640e0 617 SUPERFAMILY SSF53067 19 196 4.21E-50 T 14-10-2018 DA442_03115 8987cb8c1ed553a478cb82bf6a8640e0 617 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DA442_03115 8987cb8c1ed553a478cb82bf6a8640e0 617 Gene3D G3DSA:1.20.1270.10 521 616 3.8E-26 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 DA442_03115 8987cb8c1ed553a478cb82bf6a8640e0 617 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DA442_03115 8987cb8c1ed553a478cb82bf6a8640e0 617 Gene3D G3DSA:3.30.420.40 23 374 8.3E-112 T 14-10-2018 DA442_03115 8987cb8c1ed553a478cb82bf6a8640e0 617 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 616 9.7E-269 T 14-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 DA442_03115 8987cb8c1ed553a478cb82bf6a8640e0 617 Pfam PF00012 Hsp70 protein 22 601 2.2E-191 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DA442_03115 8987cb8c1ed553a478cb82bf6a8640e0 617 SUPERFAMILY SSF53067 200 377 9.36E-50 T 14-10-2018 DA442_03115 8987cb8c1ed553a478cb82bf6a8640e0 617 SUPERFAMILY SSF100920 384 537 4.32E-52 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 DA442_03115 8987cb8c1ed553a478cb82bf6a8640e0 617 SUPERFAMILY SSF100934 504 616 1.75E-34 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 DA442_03115 8987cb8c1ed553a478cb82bf6a8640e0 617 Gene3D G3DSA:3.90.640.10 238 311 8.3E-112 T 14-10-2018 DA442_03115 8987cb8c1ed553a478cb82bf6a8640e0 617 PRINTS PR00301 70kDa heat shock protein signature 20 33 3.5E-53 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DA442_03115 8987cb8c1ed553a478cb82bf6a8640e0 617 PRINTS PR00301 70kDa heat shock protein signature 360 380 3.5E-53 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DA442_03115 8987cb8c1ed553a478cb82bf6a8640e0 617 PRINTS PR00301 70kDa heat shock protein signature 385 404 3.5E-53 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DA442_03115 8987cb8c1ed553a478cb82bf6a8640e0 617 PRINTS PR00301 70kDa heat shock protein signature 152 172 3.5E-53 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DA442_03115 8987cb8c1ed553a478cb82bf6a8640e0 617 PRINTS PR00301 70kDa heat shock protein signature 329 345 3.5E-53 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DA442_03115 8987cb8c1ed553a478cb82bf6a8640e0 617 PRINTS PR00301 70kDa heat shock protein signature 466 482 3.5E-53 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DA442_03115 8987cb8c1ed553a478cb82bf6a8640e0 617 PRINTS PR00301 70kDa heat shock protein signature 211 221 3.5E-53 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DA442_03115 8987cb8c1ed553a478cb82bf6a8640e0 617 PRINTS PR00301 70kDa heat shock protein signature 48 60 3.5E-53 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DA442_03115 8987cb8c1ed553a478cb82bf6a8640e0 617 Gene3D G3DSA:2.60.34.10 379 520 1.5E-50 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 DA442_03115 8987cb8c1ed553a478cb82bf6a8640e0 617 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 617 46.594 T 14-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 DA442_03115 8987cb8c1ed553a478cb82bf6a8640e0 617 Gene3D G3DSA:3.30.420.40 194 361 8.3E-112 T 14-10-2018 DA442_21865 e84f5f674e0c2e845c0d0ae486220059 284 SUPERFAMILY SSF54862 94 277 8.9E-20 T 14-10-2018 DA442_21865 e84f5f674e0c2e845c0d0ae486220059 284 Pfam PF13187 4Fe-4S dicluster domain 224 270 4.7E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DA442_21865 e84f5f674e0c2e845c0d0ae486220059 284 Pfam PF12801 4Fe-4S binding domain 82 127 1.2E-13 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DA442_21865 e84f5f674e0c2e845c0d0ae486220059 284 Pfam PF12801 4Fe-4S binding domain 174 211 3.0E-5 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DA442_21865 e84f5f674e0c2e845c0d0ae486220059 284 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 257 268 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DA442_21865 e84f5f674e0c2e845c0d0ae486220059 284 Gene3D G3DSA:3.30.70.20 218 282 5.3E-7 T 14-10-2018 DA442_21865 e84f5f674e0c2e845c0d0ae486220059 284 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 25 275 2.5E-110 T 14-10-2018 IPR011886 Ferredoxin-type protein, NapH/MauN family DA442_08295 8deaff7d0dec8bcc71cef50f34aede2c 576 SMART SM00448 456 569 6.2E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_08295 8deaff7d0dec8bcc71cef50f34aede2c 576 Gene3D G3DSA:1.10.287.130 180 277 4.0E-26 T 14-10-2018 DA442_08295 8deaff7d0dec8bcc71cef50f34aede2c 576 Gene3D G3DSA:3.40.50.2300 439 574 1.9E-39 T 14-10-2018 DA442_08295 8deaff7d0dec8bcc71cef50f34aede2c 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 415 5.7E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_08295 8deaff7d0dec8bcc71cef50f34aede2c 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 434 5.7E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_08295 8deaff7d0dec8bcc71cef50f34aede2c 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 376 5.7E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_08295 8deaff7d0dec8bcc71cef50f34aede2c 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 390 5.7E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_08295 8deaff7d0dec8bcc71cef50f34aede2c 576 SUPERFAMILY SSF47384 199 280 2.75E-21 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DA442_08295 8deaff7d0dec8bcc71cef50f34aede2c 576 SMART SM00388 214 279 2.1E-22 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_08295 8deaff7d0dec8bcc71cef50f34aede2c 576 SUPERFAMILY SSF52172 456 574 1.07E-35 T 14-10-2018 IPR011006 CheY-like superfamily DA442_08295 8deaff7d0dec8bcc71cef50f34aede2c 576 Pfam PF00512 His Kinase A (phospho-acceptor) domain 214 279 5.1E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_08295 8deaff7d0dec8bcc71cef50f34aede2c 576 Pfam PF00072 Response regulator receiver domain 459 570 5.5E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_08295 8deaff7d0dec8bcc71cef50f34aede2c 576 SUPERFAMILY SSF55874 268 436 1.31E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_08295 8deaff7d0dec8bcc71cef50f34aede2c 576 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 327 435 4.2E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_08295 8deaff7d0dec8bcc71cef50f34aede2c 576 SMART SM00387 326 437 3.3E-36 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_08295 8deaff7d0dec8bcc71cef50f34aede2c 576 Gene3D G3DSA:3.30.565.10 278 438 8.0E-47 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_23580 1c74965669609a12f299e8cc0e747c5a 106 Gene3D G3DSA:2.60.120.10 1 106 2.4E-35 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DA442_23580 1c74965669609a12f299e8cc0e747c5a 106 PIRSF PIRSF029883 1 106 1.1E-37 T 14-10-2018 IPR025499 Pectin degradation protein KdgF DA442_23580 1c74965669609a12f299e8cc0e747c5a 106 SUPERFAMILY SSF51182 9 104 5.24E-23 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DA442_23580 1c74965669609a12f299e8cc0e747c5a 106 Pfam PF07883 Cupin domain 32 87 2.8E-14 T 14-10-2018 IPR013096 Cupin 2, conserved barrel DA442_23150 e526aab36a71ed46d254edbed2d843cc 484 Gene3D G3DSA:3.30.1360.60 3 79 2.9E-19 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DA442_23150 e526aab36a71ed46d254edbed2d843cc 484 SUPERFAMILY SSF55604 8 81 3.53E-18 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DA442_23150 e526aab36a71ed46d254edbed2d843cc 484 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DA442_23150 e526aab36a71ed46d254edbed2d843cc 484 Pfam PF00367 phosphotransferase system, EIIB 11 43 3.7E-10 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DA442_23150 e526aab36a71ed46d254edbed2d843cc 484 Pfam PF02378 Phosphotransferase system, EIIC 130 411 1.9E-31 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DA442_16350 0ce87e77e49b8f663f9ec1398235479d 152 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 108 125 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DA442_16350 0ce87e77e49b8f663f9ec1398235479d 152 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 81 94 5.3E-19 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 DA442_16350 0ce87e77e49b8f663f9ec1398235479d 152 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 98 112 5.3E-19 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 DA442_16350 0ce87e77e49b8f663f9ec1398235479d 152 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 113 126 5.3E-19 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 DA442_16350 0ce87e77e49b8f663f9ec1398235479d 152 Gene3D G3DSA:2.40.50.100 74 152 2.3E-32 T 14-10-2018 DA442_16350 0ce87e77e49b8f663f9ec1398235479d 152 SUPERFAMILY SSF51230 77 152 6.81E-27 T 14-10-2018 IPR011053 Single hybrid motif DA442_16350 0ce87e77e49b8f663f9ec1398235479d 152 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 152 4.6E-62 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 DA442_16350 0ce87e77e49b8f663f9ec1398235479d 152 Pfam PF00364 Biotin-requiring enzyme 77 151 4.3E-26 T 14-10-2018 IPR000089 Biotin/lipoyl attachment DA442_12990 71e635ca4241f4deadb5210979b0ad8e 181 Gene3D G3DSA:2.40.100.10 18 181 7.7E-59 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily DA442_12990 71e635ca4241f4deadb5210979b0ad8e 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 35 50 9.2E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DA442_12990 71e635ca4241f4deadb5210979b0ad8e 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 9.2E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DA442_12990 71e635ca4241f4deadb5210979b0ad8e 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 61 73 9.2E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DA442_12990 71e635ca4241f4deadb5210979b0ad8e 181 SUPERFAMILY SSF50891 18 180 9.64E-53 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily DA442_12990 71e635ca4241f4deadb5210979b0ad8e 181 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 22 178 5.8E-43 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DA442_12990 71e635ca4241f4deadb5210979b0ad8e 181 PIRSF PIRSF001467 5 181 2.9E-24 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 DA442_12990 71e635ca4241f4deadb5210979b0ad8e 181 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 56 73 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 DA442_25085 a04e59a4b2f8f693381c9060b0863694 795 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 12 794 0.0 T 14-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 DA442_25085 a04e59a4b2f8f693381c9060b0863694 795 Pfam PF00391 PEP-utilising enzyme, mobile domain 389 460 1.5E-26 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 DA442_25085 a04e59a4b2f8f693381c9060b0863694 795 Gene3D G3DSA:3.50.30.10 363 482 4.9E-41 T 14-10-2018 DA442_25085 a04e59a4b2f8f693381c9060b0863694 795 SUPERFAMILY SSF51621 467 793 6.85E-98 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DA442_25085 a04e59a4b2f8f693381c9060b0863694 795 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 699 717 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 DA442_25085 a04e59a4b2f8f693381c9060b0863694 795 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 419 430 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 DA442_25085 a04e59a4b2f8f693381c9060b0863694 795 PIRSF PIRSF000854 5 795 0.0 T 14-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 DA442_25085 a04e59a4b2f8f693381c9060b0863694 795 Gene3D G3DSA:3.20.20.60 483 793 5.7E-104 T 14-10-2018 DA442_25085 a04e59a4b2f8f693381c9060b0863694 795 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 23 350 2.2E-119 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 DA442_25085 a04e59a4b2f8f693381c9060b0863694 795 SUPERFAMILY SSF56059 6 389 6.83E-108 T 14-10-2018 DA442_25085 a04e59a4b2f8f693381c9060b0863694 795 Gene3D G3DSA:3.30.1490.20 7 198 1.7E-72 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DA442_25085 a04e59a4b2f8f693381c9060b0863694 795 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 487 787 5.0E-62 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 DA442_25085 a04e59a4b2f8f693381c9060b0863694 795 Gene3D G3DSA:3.30.470.20 199 362 1.1E-58 T 14-10-2018 DA442_25085 a04e59a4b2f8f693381c9060b0863694 795 SUPERFAMILY SSF52009 354 472 2.35E-34 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 DA442_08450 4df935779c69a7777ec99474ad9074a0 160 SUPERFAMILY SSF89963 2 86 7.59E-31 T 14-10-2018 IPR036183 YajQ-like superfamily DA442_08450 4df935779c69a7777ec99474ad9074a0 160 Gene3D G3DSA:3.30.70.990 9 94 4.1E-27 T 14-10-2018 IPR035570 UPF0234, N-terminal DA442_08450 4df935779c69a7777ec99474ad9074a0 160 Pfam PF04461 Protein of unknown function (DUF520) 2 159 1.0E-64 T 14-10-2018 IPR007551 Protein of unknown function DUF520 DA442_08450 4df935779c69a7777ec99474ad9074a0 160 Gene3D G3DSA:3.30.70.860 95 160 1.6E-30 T 14-10-2018 IPR035571 UPF0234-like, C-terminal DA442_08450 4df935779c69a7777ec99474ad9074a0 160 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 160 29.761 T 14-10-2018 IPR007551 Protein of unknown function DUF520 DA442_08450 4df935779c69a7777ec99474ad9074a0 160 SUPERFAMILY SSF89963 88 160 7.32E-29 T 14-10-2018 IPR036183 YajQ-like superfamily DA442_14345 42603f0495b1ba54b5a00b9b7534ee29 316 SMART SM00829 12 312 2.2E-13 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DA442_14345 42603f0495b1ba54b5a00b9b7534ee29 316 SUPERFAMILY SSF51735 123 243 8.11E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_14345 42603f0495b1ba54b5a00b9b7534ee29 316 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 93 1.9E-8 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DA442_14345 42603f0495b1ba54b5a00b9b7534ee29 316 Gene3D G3DSA:3.90.180.10 10 310 3.9E-91 T 14-10-2018 DA442_14345 42603f0495b1ba54b5a00b9b7534ee29 316 Gene3D G3DSA:3.40.50.720 133 263 3.9E-91 T 14-10-2018 DA442_14345 42603f0495b1ba54b5a00b9b7534ee29 316 SUPERFAMILY SSF50129 4 154 1.13E-34 T 14-10-2018 IPR011032 GroES-like superfamily DA442_14345 42603f0495b1ba54b5a00b9b7534ee29 316 Pfam PF13602 Zinc-binding dehydrogenase 191 312 2.2E-19 T 14-10-2018 DA442_13255 b7286b0571612b8b3db34860e11eb091 1031 Gene3D G3DSA:2.70.98.10 732 1003 1.1E-81 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 DA442_13255 b7286b0571612b8b3db34860e11eb091 1031 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 320 604 1.3E-114 T 14-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 DA442_13255 b7286b0571612b8b3db34860e11eb091 1031 SMART SM01038 727 998 1.6E-127 T 14-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 DA442_13255 b7286b0571612b8b3db34860e11eb091 1031 Pfam PF00703 Glycosyl hydrolases family 2 208 318 3.0E-17 T 14-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 DA442_13255 b7286b0571612b8b3db34860e11eb091 1031 Gene3D G3DSA:3.20.20.80 319 599 1.6E-101 T 14-10-2018 DA442_13255 b7286b0571612b8b3db34860e11eb091 1031 SUPERFAMILY SSF49303 208 318 1.71E-24 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily DA442_13255 b7286b0571612b8b3db34860e11eb091 1031 PRINTS PR00132 Glycosyl hydrolase family 2 signature 360 378 4.6E-32 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 DA442_13255 b7286b0571612b8b3db34860e11eb091 1031 PRINTS PR00132 Glycosyl hydrolase family 2 signature 134 149 4.6E-32 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 DA442_13255 b7286b0571612b8b3db34860e11eb091 1031 PRINTS PR00132 Glycosyl hydrolase family 2 signature 329 343 4.6E-32 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 DA442_13255 b7286b0571612b8b3db34860e11eb091 1031 PRINTS PR00132 Glycosyl hydrolase family 2 signature 506 521 4.6E-32 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 DA442_13255 b7286b0571612b8b3db34860e11eb091 1031 PRINTS PR00132 Glycosyl hydrolase family 2 signature 435 450 4.6E-32 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 DA442_13255 b7286b0571612b8b3db34860e11eb091 1031 Pfam PF16353 Domain of unknown function(DUF4981) 615 699 1.7E-13 T 14-10-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 DA442_13255 b7286b0571612b8b3db34860e11eb091 1031 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 435 449 - T 14-10-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 DA442_13255 b7286b0571612b8b3db34860e11eb091 1031 SUPERFAMILY SSF51445 320 598 2.16E-84 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DA442_13255 b7286b0571612b8b3db34860e11eb091 1031 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 44 203 3.9E-46 T 14-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 DA442_13255 b7286b0571612b8b3db34860e11eb091 1031 SUPERFAMILY SSF49303 612 705 2.7E-19 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily DA442_13255 b7286b0571612b8b3db34860e11eb091 1031 SUPERFAMILY SSF49785 2 205 8.5E-60 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily DA442_13255 b7286b0571612b8b3db34860e11eb091 1031 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 370 395 - T 14-10-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 DA442_13255 b7286b0571612b8b3db34860e11eb091 1031 Gene3D G3DSA:2.60.40.10 601 705 6.2E-14 T 14-10-2018 IPR013783 Immunoglobulin-like fold DA442_13255 b7286b0571612b8b3db34860e11eb091 1031 Pfam PF02929 Beta galactosidase small chain 729 997 6.7E-70 T 14-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 DA442_13255 b7286b0571612b8b3db34860e11eb091 1031 Gene3D G3DSA:2.60.40.10 207 318 2.6E-25 T 14-10-2018 IPR013783 Immunoglobulin-like fold DA442_13255 b7286b0571612b8b3db34860e11eb091 1031 SUPERFAMILY SSF74650 714 1000 3.24E-87 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 DA442_13255 b7286b0571612b8b3db34860e11eb091 1031 Gene3D G3DSA:2.60.120.260 1 206 2.9E-72 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily DA442_02265 9c57176dd986eeab8f45ca0a641b126d 196 Gene3D G3DSA:2.102.10.10 43 190 3.2E-47 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DA442_02265 9c57176dd986eeab8f45ca0a641b126d 196 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 5 40 1.0E-13 T 14-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 DA442_02265 9c57176dd986eeab8f45ca0a641b126d 196 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 190 3.9E-74 T 14-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 DA442_02265 9c57176dd986eeab8f45ca0a641b126d 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 162 174 3.0E-7 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 DA442_02265 9c57176dd986eeab8f45ca0a641b126d 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 149 161 3.0E-7 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 DA442_02265 9c57176dd986eeab8f45ca0a641b126d 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 130 3.0E-7 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 DA442_02265 9c57176dd986eeab8f45ca0a641b126d 196 Pfam PF00355 Rieske [2Fe-2S] domain 55 174 2.7E-11 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 DA442_02265 9c57176dd986eeab8f45ca0a641b126d 196 SUPERFAMILY SSF50022 30 189 1.01E-42 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DA442_19230 79f32206e7d228b5288f32d08b059974 206 Pfam PF00226 DnaJ domain 160 205 2.7E-10 T 14-10-2018 IPR001623 DnaJ domain DA442_19230 79f32206e7d228b5288f32d08b059974 206 SMART SM00271 153 206 1.2E-6 T 14-10-2018 IPR001623 DnaJ domain DA442_19230 79f32206e7d228b5288f32d08b059974 206 Gene3D G3DSA:1.10.287.110 147 206 1.2E-11 T 14-10-2018 IPR036869 Chaperone J-domain superfamily DA442_19230 79f32206e7d228b5288f32d08b059974 206 Pfam PF12339 DNA-J related protein 17 138 4.6E-43 T 14-10-2018 IPR021059 DnaJ-related protein, N-terminal DA442_19230 79f32206e7d228b5288f32d08b059974 206 SUPERFAMILY SSF46565 112 205 1.11E-13 T 14-10-2018 IPR036869 Chaperone J-domain superfamily DA442_08770 22c18c0307463ff8734783a7934b1bcb 510 Gene3D G3DSA:1.20.1250.20 3 186 2.4E-9 T 14-10-2018 DA442_08770 22c18c0307463ff8734783a7934b1bcb 510 SUPERFAMILY SSF103473 208 422 2.62E-6 T 14-10-2018 IPR036259 MFS transporter superfamily DA442_08770 22c18c0307463ff8734783a7934b1bcb 510 SUPERFAMILY SSF103473 4 191 1.7E-12 T 14-10-2018 IPR036259 MFS transporter superfamily DA442_08770 22c18c0307463ff8734783a7934b1bcb 510 Gene3D G3DSA:1.20.1250.20 187 429 4.4E-7 T 14-10-2018 DA442_12545 cca7038448044196d0ef1f8d005a0475 378 SUPERFAMILY SSF55031 181 291 3.74E-28 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DA442_12545 cca7038448044196d0ef1f8d005a0475 378 Gene3D G3DSA:3.30.70.360 181 294 2.7E-128 T 14-10-2018 DA442_12545 cca7038448044196d0ef1f8d005a0475 378 Pfam PF07687 Peptidase dimerisation domain 177 284 2.6E-22 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain DA442_12545 cca7038448044196d0ef1f8d005a0475 378 SUPERFAMILY SSF53187 6 376 1.13E-67 T 14-10-2018 DA442_12545 cca7038448044196d0ef1f8d005a0475 378 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 377 52.106 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 DA442_12545 cca7038448044196d0ef1f8d005a0475 378 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 7 375 9.1E-179 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 DA442_12545 cca7038448044196d0ef1f8d005a0475 378 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 99 137 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 DA442_12545 cca7038448044196d0ef1f8d005a0475 378 Gene3D G3DSA:3.40.630.10 9 364 2.7E-128 T 14-10-2018 DA442_12545 cca7038448044196d0ef1f8d005a0475 378 Pfam PF01546 Peptidase family M20/M25/M40 64 373 3.2E-46 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 DA442_04335 0adfbbc9350e01b608059402d0169c86 554 PIRSF PIRSF001589 363 506 1.3E-27 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 DA442_04335 0adfbbc9350e01b608059402d0169c86 554 PIRSF PIRSF001589 1 379 1.6E-106 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 DA442_04335 0adfbbc9350e01b608059402d0169c86 554 Pfam PF13537 Glutamine amidotransferase domain 48 165 3.8E-40 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain DA442_04335 0adfbbc9350e01b608059402d0169c86 554 SUPERFAMILY SSF52402 208 483 1.86E-74 T 14-10-2018 DA442_04335 0adfbbc9350e01b608059402d0169c86 554 Gene3D G3DSA:3.60.20.10 2 193 5.7E-70 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DA442_04335 0adfbbc9350e01b608059402d0169c86 554 Gene3D G3DSA:3.40.50.620 194 514 5.0E-112 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DA442_04335 0adfbbc9350e01b608059402d0169c86 554 Pfam PF00733 Asparagine synthase 211 366 4.3E-56 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 DA442_04335 0adfbbc9350e01b608059402d0169c86 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 372 1.2E-115 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 DA442_04335 0adfbbc9350e01b608059402d0169c86 554 SUPERFAMILY SSF56235 1 196 1.8E-56 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DA442_23295 7b8d319f5384776cd543b4bba6ef603c 263 SUPERFAMILY SSF52172 4 155 1.28E-28 T 14-10-2018 IPR011006 CheY-like superfamily DA442_23295 7b8d319f5384776cd543b4bba6ef603c 263 SMART SM00850 164 263 1.0E-21 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 DA442_23295 7b8d319f5384776cd543b4bba6ef603c 263 Pfam PF04397 LytTr DNA-binding domain 165 262 2.6E-26 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 DA442_23295 7b8d319f5384776cd543b4bba6ef603c 263 Gene3D G3DSA:3.40.50.2300 2 138 5.2E-30 T 14-10-2018 DA442_23295 7b8d319f5384776cd543b4bba6ef603c 263 Gene3D G3DSA:2.40.50.40 156 229 3.7E-9 T 14-10-2018 DA442_23295 7b8d319f5384776cd543b4bba6ef603c 263 Pfam PF00072 Response regulator receiver domain 8 116 6.0E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_23295 7b8d319f5384776cd543b4bba6ef603c 263 SMART SM00448 5 117 4.6E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_15290 838f40873f5945901d29ad53314bdfe6 188 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 4.2E-4 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DA442_15290 838f40873f5945901d29ad53314bdfe6 188 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 25 1.2E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DA442_17815 acab57709830c0e991c6149481bd496d 136 Pfam PF09905 DNA-binding protein VF530 11 73 2.1E-31 T 14-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 DA442_17815 acab57709830c0e991c6149481bd496d 136 Gene3D G3DSA:1.10.720.30 19 78 9.0E-27 T 14-10-2018 IPR036361 SAP domain superfamily DA442_03495 239951ab22624541ac25f959443ab008 369 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 1.3E-85 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DA442_03495 239951ab22624541ac25f959443ab008 369 SUPERFAMILY SSF55821 3 202 1.9E-87 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DA442_03495 239951ab22624541ac25f959443ab008 369 Pfam PF00925 GTP cyclohydrolase II 207 367 6.6E-41 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DA442_03495 239951ab22624541ac25f959443ab008 369 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.75 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DA442_03495 239951ab22624541ac25f959443ab008 369 PIRSF PIRSF001259 3 369 2.6E-131 T 14-10-2018 DA442_03495 239951ab22624541ac25f959443ab008 369 SUPERFAMILY SSF142695 205 367 1.1E-48 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DA442_03495 239951ab22624541ac25f959443ab008 369 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 7 199 3.8E-76 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DA442_03495 239951ab22624541ac25f959443ab008 369 Gene3D G3DSA:3.90.870.10 1 206 8.7E-90 T 14-10-2018 DA442_17805 54f4c03876ee53503c2bb787e9caba96 71 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 15 68 1.0E-12 T 14-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor DA442_17805 54f4c03876ee53503c2bb787e9caba96 71 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 4 68 2.1E-30 T 14-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor DA442_11180 74f7280d208feb92a6f10dad13d32d3b 354 Gene3D G3DSA:2.40.30.170 38 311 7.8E-40 T 14-10-2018 DA442_11180 74f7280d208feb92a6f10dad13d32d3b 354 Pfam PF13437 HlyD family secretion protein 200 268 3.1E-6 T 14-10-2018 DA442_11180 74f7280d208feb92a6f10dad13d32d3b 354 Gene3D G3DSA:1.10.287.470 77 199 7.8E-40 T 14-10-2018 DA442_11180 74f7280d208feb92a6f10dad13d32d3b 354 SUPERFAMILY SSF111369 178 253 1.1E-5 T 14-10-2018 DA442_11180 74f7280d208feb92a6f10dad13d32d3b 354 Gene3D G3DSA:2.40.50.100 43 234 7.8E-40 T 14-10-2018 DA442_11180 74f7280d208feb92a6f10dad13d32d3b 354 Pfam PF13533 Biotin-lipoyl like 44 88 8.6E-17 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain DA442_11180 74f7280d208feb92a6f10dad13d32d3b 354 SUPERFAMILY SSF111369 38 96 1.06E-9 T 14-10-2018 DA442_11180 74f7280d208feb92a6f10dad13d32d3b 354 SUPERFAMILY SSF111369 109 166 3.14E-6 T 14-10-2018 DA442_11180 74f7280d208feb92a6f10dad13d32d3b 354 Gene3D G3DSA:2.40.420.20 313 324 7.8E-40 T 14-10-2018 DA442_03685 c088a159ca4f11898203174f3d2aede1 392 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 33 263 1.8E-94 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 DA442_03685 c088a159ca4f11898203174f3d2aede1 392 Gene3D G3DSA:2.60.410.10 283 373 5.2E-31 T 14-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DA442_03685 c088a159ca4f11898203174f3d2aede1 392 SUPERFAMILY SSF56601 11 283 4.01E-84 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DA442_03685 c088a159ca4f11898203174f3d2aede1 392 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 283 373 3.8E-29 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DA442_03685 c088a159ca4f11898203174f3d2aede1 392 Gene3D G3DSA:3.40.710.10 27 282 1.5E-89 T 14-10-2018 DA442_03685 c088a159ca4f11898203174f3d2aede1 392 SUPERFAMILY SSF69189 283 375 3.34E-28 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DA442_03685 c088a159ca4f11898203174f3d2aede1 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 122 139 2.6E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DA442_03685 c088a159ca4f11898203174f3d2aede1 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 149 162 2.6E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DA442_03685 c088a159ca4f11898203174f3d2aede1 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 66 77 2.6E-17 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DA442_03685 c088a159ca4f11898203174f3d2aede1 392 SMART SM00936 283 373 1.4E-38 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DA442_13305 3164a1ec6704fb1095cc22e4da467c90 402 Pfam PF13614 AAA domain 153 307 1.2E-10 T 14-10-2018 IPR025669 AAA domain DA442_13305 3164a1ec6704fb1095cc22e4da467c90 402 SUPERFAMILY SSF52540 152 384 2.41E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_13305 3164a1ec6704fb1095cc22e4da467c90 402 Gene3D G3DSA:3.40.50.300 150 386 8.7E-41 T 14-10-2018 DA442_12565 a53019b1f1820d8f6dc76c972429c83f 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 65.69 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DA442_12565 a53019b1f1820d8f6dc76c972429c83f 292 PIRSF PIRSF001365 1 292 9.8E-97 T 14-10-2018 IPR002220 DapA-like GO:0016829 DA442_12565 a53019b1f1820d8f6dc76c972429c83f 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 8.4E-36 T 14-10-2018 IPR002220 DapA-like GO:0016829 DA442_12565 a53019b1f1820d8f6dc76c972429c83f 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 8.4E-36 T 14-10-2018 IPR002220 DapA-like GO:0016829 DA442_12565 a53019b1f1820d8f6dc76c972429c83f 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 8.4E-36 T 14-10-2018 IPR002220 DapA-like GO:0016829 DA442_12565 a53019b1f1820d8f6dc76c972429c83f 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 8.4E-36 T 14-10-2018 IPR002220 DapA-like GO:0016829 DA442_12565 a53019b1f1820d8f6dc76c972429c83f 292 Gene3D G3DSA:3.20.20.70 1 292 5.6E-111 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_12565 a53019b1f1820d8f6dc76c972429c83f 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 14-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DA442_12565 a53019b1f1820d8f6dc76c972429c83f 292 SMART SM01130 1 290 2.1E-142 T 14-10-2018 IPR002220 DapA-like GO:0016829 DA442_12565 a53019b1f1820d8f6dc76c972429c83f 292 SUPERFAMILY SSF51569 2 290 3.66E-101 T 14-10-2018 DA442_12565 a53019b1f1820d8f6dc76c972429c83f 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 288 1.4E-118 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DA442_12565 a53019b1f1820d8f6dc76c972429c83f 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 14-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 DA442_12565 a53019b1f1820d8f6dc76c972429c83f 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 287 8.1E-110 T 14-10-2018 IPR002220 DapA-like GO:0016829 DA442_24375 ba148accdba6a10bcafeae248da979b6 95 SUPERFAMILY SSF52794 1 89 4.19E-21 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DA442_24375 ba148accdba6a10bcafeae248da979b6 95 Gene3D G3DSA:3.40.50.2300 1 90 1.1E-20 T 14-10-2018 DA442_24375 ba148accdba6a10bcafeae248da979b6 95 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 83 4.1E-14 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DA442_01785 dec8d8780046449d053d2daa4f49e6f3 390 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 3.4E-143 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 DA442_01785 dec8d8780046449d053d2daa4f49e6f3 390 Pfam PF01018 GTP1/OBG 4 156 9.9E-56 T 14-10-2018 IPR006169 GTP1/OBG domain DA442_01785 dec8d8780046449d053d2daa4f49e6f3 390 PIRSF PIRSF002401 1 375 5.7E-137 T 14-10-2018 IPR035101 GTP-binding protein, Obg-type DA442_01785 dec8d8780046449d053d2daa4f49e6f3 390 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 14-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 DA442_01785 dec8d8780046449d053d2daa4f49e6f3 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 7.1E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DA442_01785 dec8d8780046449d053d2daa4f49e6f3 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 7.1E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DA442_01785 dec8d8780046449d053d2daa4f49e6f3 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 7.1E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DA442_01785 dec8d8780046449d053d2daa4f49e6f3 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 7.1E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DA442_01785 dec8d8780046449d053d2daa4f49e6f3 390 Hamap MF_01454 GTPase Obg [obg]. 2 333 47.059 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 DA442_01785 dec8d8780046449d053d2daa4f49e6f3 390 SUPERFAMILY SSF82051 2 157 3.4E-55 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily DA442_01785 dec8d8780046449d053d2daa4f49e6f3 390 Pfam PF01926 50S ribosome-binding GTPase 161 284 4.1E-23 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DA442_01785 dec8d8780046449d053d2daa4f49e6f3 390 Gene3D G3DSA:2.70.210.12 1 158 3.3E-58 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily DA442_01785 dec8d8780046449d053d2daa4f49e6f3 390 Gene3D G3DSA:3.40.50.300 159 336 1.2E-51 T 14-10-2018 DA442_01785 dec8d8780046449d053d2daa4f49e6f3 390 SUPERFAMILY SSF52540 151 340 1.13E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_06345 3f324f0c1d1853f4de8d958d64aae447 534 Gene3D G3DSA:3.90.1150.170 37 510 4.1E-115 T 14-10-2018 DA442_06345 3f324f0c1d1853f4de8d958d64aae447 534 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 50 428 7.9E-57 T 14-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 DA442_06345 3f324f0c1d1853f4de8d958d64aae447 534 TIGRFAM TIGR03799 NOD_PanD_pyr: putative pyridoxal-dependent aspartate 1-decarboxylase 1 513 9.6E-299 T 14-10-2018 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 DA442_06345 3f324f0c1d1853f4de8d958d64aae447 534 SUPERFAMILY SSF53383 15 516 1.34E-117 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_06345 3f324f0c1d1853f4de8d958d64aae447 534 Gene3D G3DSA:3.40.640.10 108 373 4.1E-115 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_15575 651a2b034d77ed5ba0c119708376fd32 100 SUPERFAMILY SSF50249 1 99 2.19E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_15575 651a2b034d77ed5ba0c119708376fd32 100 Pfam PF00436 Single-strand binding protein family 3 88 4.4E-7 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 DA442_15575 651a2b034d77ed5ba0c119708376fd32 100 Hamap MF_00720 Primosomal replication protein N [priB]. 2 100 22.81 T 14-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 DA442_15575 651a2b034d77ed5ba0c119708376fd32 100 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 3 100 3.0E-31 T 14-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 DA442_15575 651a2b034d77ed5ba0c119708376fd32 100 Gene3D G3DSA:2.40.50.140 1 100 6.0E-29 T 14-10-2018 DA442_15575 651a2b034d77ed5ba0c119708376fd32 100 PIRSF PIRSF003135 1 100 1.3E-46 T 14-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 DA442_03565 9426db590bbe190f535c0bca114fb4df 363 PIRSF PIRSF028774 1 362 5.4E-194 T 14-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 DA442_03565 9426db590bbe190f535c0bca114fb4df 363 Pfam PF01728 FtsJ-like methyltransferase 188 281 2.7E-5 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 DA442_03565 9426db590bbe190f535c0bca114fb4df 363 Gene3D G3DSA:3.30.70.2810 1 79 2.5E-33 T 14-10-2018 DA442_03565 9426db590bbe190f535c0bca114fb4df 363 Gene3D G3DSA:3.30.2300.20 80 177 1.1E-39 T 14-10-2018 DA442_03565 9426db590bbe190f535c0bca114fb4df 363 SUPERFAMILY SSF53335 186 298 1.31E-12 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_03565 9426db590bbe190f535c0bca114fb4df 363 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 357 83.409 T 14-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 DA442_03565 9426db590bbe190f535c0bca114fb4df 363 Gene3D G3DSA:3.40.50.150 178 358 3.3E-52 T 14-10-2018 DA442_23525 268d2f9665b711d4dce05c722df08aed 363 Gene3D G3DSA:3.30.70.270 211 363 1.5E-39 T 14-10-2018 DA442_23525 268d2f9665b711d4dce05c722df08aed 363 SMART SM00267 203 363 9.9E-35 T 14-10-2018 IPR000160 GGDEF domain DA442_23525 268d2f9665b711d4dce05c722df08aed 363 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 213 360 1.1E-31 T 14-10-2018 IPR000160 GGDEF domain DA442_23525 268d2f9665b711d4dce05c722df08aed 363 SUPERFAMILY SSF55073 220 361 3.14E-35 T 14-10-2018 IPR029787 Nucleotide cyclase DA442_23525 268d2f9665b711d4dce05c722df08aed 363 Pfam PF00990 Diguanylate cyclase, GGDEF domain 216 361 2.3E-34 T 14-10-2018 IPR000160 GGDEF domain DA442_24340 dddbdc727c699dede98d0a7e50fc3595 391 Gene3D G3DSA:2.40.30.170 46 309 6.5E-92 T 14-10-2018 DA442_24340 dddbdc727c699dede98d0a7e50fc3595 391 Gene3D G3DSA:1.10.287.470 91 182 6.5E-92 T 14-10-2018 DA442_24340 dddbdc727c699dede98d0a7e50fc3595 391 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 36 373 4.6E-52 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DA442_24340 dddbdc727c699dede98d0a7e50fc3595 391 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 54 261 3.7E-20 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DA442_24340 dddbdc727c699dede98d0a7e50fc3595 391 Gene3D G3DSA:2.40.420.20 41 369 6.5E-92 T 14-10-2018 DA442_24340 dddbdc727c699dede98d0a7e50fc3595 391 Gene3D G3DSA:2.40.50.100 57 219 6.5E-92 T 14-10-2018 DA442_24340 dddbdc727c699dede98d0a7e50fc3595 391 SUPERFAMILY SSF111369 50 305 3.66E-24 T 14-10-2018 DA442_11390 77fed326f9030c6ef81815d71e2fa603 353 Pfam PF01343 Peptidase family S49 166 314 2.2E-47 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 DA442_11390 77fed326f9030c6ef81815d71e2fa603 353 Pfam PF08496 Peptidase family S49 N-terminal 2 162 1.3E-56 T 14-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 DA442_11390 77fed326f9030c6ef81815d71e2fa603 353 SUPERFAMILY SSF52096 103 303 7.85E-30 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DA442_11390 77fed326f9030c6ef81815d71e2fa603 353 Gene3D G3DSA:3.40.1750.20 206 270 2.4E-45 T 14-10-2018 DA442_11390 77fed326f9030c6ef81815d71e2fa603 353 Gene3D G3DSA:3.90.226.10 109 306 2.4E-45 T 14-10-2018 DA442_12165 b877593ce5c9f069bb1f371b15bc6378 403 SUPERFAMILY SSF53901 213 401 1.38E-62 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DA442_12165 b877593ce5c9f069bb1f371b15bc6378 403 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 358 1.3E-27 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal DA442_12165 b877593ce5c9f069bb1f371b15bc6378 403 Gene3D G3DSA:3.40.47.10 1 253 6.6E-69 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DA442_12165 b877593ce5c9f069bb1f371b15bc6378 403 SMART SM00825 Beta-ketoacyl synthase 4 403 1.0E-14 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DA442_12165 b877593ce5c9f069bb1f371b15bc6378 403 Gene3D G3DSA:3.40.47.10 258 401 4.2E-50 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DA442_12165 b877593ce5c9f069bb1f371b15bc6378 403 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 4.5E-46 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal DA442_12165 b877593ce5c9f069bb1f371b15bc6378 403 SUPERFAMILY SSF53901 1 251 4.32E-67 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DA442_12165 b877593ce5c9f069bb1f371b15bc6378 403 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site DA442_01400 b6c4100ac8e9f651a3d01dd11455db2d 335 Gene3D G3DSA:3.40.50.2300 160 289 1.3E-80 T 14-10-2018 DA442_01400 b6c4100ac8e9f651a3d01dd11455db2d 335 SUPERFAMILY SSF53822 60 332 4.71E-89 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DA442_01400 b6c4100ac8e9f651a3d01dd11455db2d 335 SMART SM00354 1 71 2.4E-31 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DA442_01400 b6c4100ac8e9f651a3d01dd11455db2d 335 Gene3D G3DSA:1.10.260.40 1 55 5.7E-26 T 14-10-2018 DA442_01400 b6c4100ac8e9f651a3d01dd11455db2d 335 Pfam PF13377 Periplasmic binding protein-like domain 168 328 2.3E-40 T 14-10-2018 DA442_01400 b6c4100ac8e9f651a3d01dd11455db2d 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 8.0E-20 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DA442_01400 b6c4100ac8e9f651a3d01dd11455db2d 335 SUPERFAMILY SSF47413 1 59 3.47E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DA442_01400 b6c4100ac8e9f651a3d01dd11455db2d 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 DA442_01400 b6c4100ac8e9f651a3d01dd11455db2d 335 Gene3D G3DSA:3.40.50.2300 56 306 1.3E-80 T 14-10-2018 DA442_10170 c3df4646dc8ce1c2d91694b72cdf557a 142 Pfam PF13673 Acetyltransferase (GNAT) domain 29 130 9.9E-17 T 14-10-2018 IPR000182 GNAT domain DA442_10170 c3df4646dc8ce1c2d91694b72cdf557a 142 SUPERFAMILY SSF55729 2 132 7.48E-29 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_10170 c3df4646dc8ce1c2d91694b72cdf557a 142 Gene3D G3DSA:3.40.630.30 1 135 9.4E-36 T 14-10-2018 DA442_00685 8c991ebd936a39c5929f2e3b79234d0a 128 SMART SM00363 8 71 1.4E-11 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_00685 8c991ebd936a39c5929f2e3b79234d0a 128 PIRSF PIRSF016821 5 128 7.3E-42 T 14-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 DA442_00685 8c991ebd936a39c5929f2e3b79234d0a 128 SUPERFAMILY SSF55174 8 105 4.84E-31 T 14-10-2018 DA442_00685 8c991ebd936a39c5929f2e3b79234d0a 128 Pfam PF01479 S4 domain 8 54 4.0E-13 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_00685 8c991ebd936a39c5929f2e3b79234d0a 128 Gene3D G3DSA:3.10.290.10 3 107 7.2E-37 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DA442_13100 e40435c7b3ac1c4f663940773616758f 715 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 18 713 3.1E-217 T 14-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 DA442_13100 e40435c7b3ac1c4f663940773616758f 715 SUPERFAMILY SSF52540 20 454 2.22E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_13100 e40435c7b3ac1c4f663940773616758f 715 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 27 711 50.116 T 14-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 DA442_13100 e40435c7b3ac1c4f663940773616758f 715 Pfam PF13538 UvrD-like helicase C-terminal domain 642 688 1.2E-14 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain DA442_13100 e40435c7b3ac1c4f663940773616758f 715 SUPERFAMILY SSF52540 374 713 7.17E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_13100 e40435c7b3ac1c4f663940773616758f 715 Gene3D G3DSA:3.40.50.300 582 702 1.1E-25 T 14-10-2018 DA442_13100 e40435c7b3ac1c4f663940773616758f 715 Gene3D G3DSA:3.40.50.300 459 581 1.3E-27 T 14-10-2018 DA442_13100 e40435c7b3ac1c4f663940773616758f 715 Pfam PF13604 AAA domain 248 409 2.1E-30 T 14-10-2018 DA442_13100 e40435c7b3ac1c4f663940773616758f 715 Gene3D G3DSA:1.10.10.1020 13 134 1.6E-22 T 14-10-2018 DA442_13100 e40435c7b3ac1c4f663940773616758f 715 Gene3D G3DSA:3.40.50.300 216 449 1.8E-75 T 14-10-2018 DA442_13730 b82f1542c63fc9c619483a3596a314e4 389 PIRSF PIRSF029347 139 359 6.9E-6 T 14-10-2018 IPR014555 RecF-like DA442_13730 b82f1542c63fc9c619483a3596a314e4 389 PIRSF PIRSF029347 1 101 3.2E-9 T 14-10-2018 IPR014555 RecF-like DA442_13730 b82f1542c63fc9c619483a3596a314e4 389 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 24 320 2.2E-13 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DA442_13730 b82f1542c63fc9c619483a3596a314e4 389 Gene3D G3DSA:3.40.50.300 1 344 1.2E-17 T 14-10-2018 DA442_13730 b82f1542c63fc9c619483a3596a314e4 389 SUPERFAMILY SSF52540 1 324 1.21E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_03265 92deb58c11f4267bb2c5f99d1d369900 443 PIRSF PIRSF000521 1 438 2.1E-33 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DA442_03265 92deb58c11f4267bb2c5f99d1d369900 443 Gene3D G3DSA:3.40.640.10 48 326 5.0E-152 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_03265 92deb58c11f4267bb2c5f99d1d369900 443 Gene3D G3DSA:3.90.1150.10 15 434 5.0E-152 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DA442_03265 92deb58c11f4267bb2c5f99d1d369900 443 SUPERFAMILY SSF53383 7 437 3.06E-123 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_03265 92deb58c11f4267bb2c5f99d1d369900 443 Pfam PF00202 Aminotransferase class-III 11 434 1.5E-107 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DA442_03265 92deb58c11f4267bb2c5f99d1d369900 443 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 274 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DA442_24305 2f9884b287e947e3f7f0cd481cc6612d 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.3E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_24305 2f9884b287e947e3f7f0cd481cc6612d 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.3E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_24305 2f9884b287e947e3f7f0cd481cc6612d 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.3E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_24305 2f9884b287e947e3f7f0cd481cc6612d 307 Gene3D G3DSA:3.40.190.10 163 263 3.3E-72 T 14-10-2018 DA442_24305 2f9884b287e947e3f7f0cd481cc6612d 307 Gene3D G3DSA:3.40.190.10 92 289 3.3E-72 T 14-10-2018 DA442_24305 2f9884b287e947e3f7f0cd481cc6612d 307 Gene3D G3DSA:1.10.10.10 3 91 1.7E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_24305 2f9884b287e947e3f7f0cd481cc6612d 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 9.8E-22 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_24305 2f9884b287e947e3f7f0cd481cc6612d 307 SUPERFAMILY SSF46785 5 88 3.29E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_24305 2f9884b287e947e3f7f0cd481cc6612d 307 SUPERFAMILY SSF53850 89 294 6.05E-51 T 14-10-2018 DA442_24305 2f9884b287e947e3f7f0cd481cc6612d 307 Pfam PF03466 LysR substrate binding domain 88 292 7.0E-50 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_11715 f16c2d637fa3f6c4a5a3e55be07b7c60 85 Gene3D G3DSA:3.10.20.30 1 85 8.4E-23 T 14-10-2018 IPR012675 Beta-grasp domain superfamily DA442_11715 f16c2d637fa3f6c4a5a3e55be07b7c60 85 SUPERFAMILY SSF54285 1 85 9.72E-19 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp DA442_11715 f16c2d637fa3f6c4a5a3e55be07b7c60 85 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 85 2.8E-20 T 14-10-2018 DA442_11715 f16c2d637fa3f6c4a5a3e55be07b7c60 85 Pfam PF02597 ThiS family 4 85 6.3E-22 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 DA442_21595 5186e64834a36701483d6f7ed74e6ae4 217 Pfam PF02254 TrkA-N domain 5 119 1.2E-23 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 DA442_21595 5186e64834a36701483d6f7ed74e6ae4 217 SUPERFAMILY SSF51735 3 133 9.63E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_21595 5186e64834a36701483d6f7ed74e6ae4 217 Gene3D G3DSA:3.40.50.720 1 137 2.6E-32 T 14-10-2018 DA442_21595 5186e64834a36701483d6f7ed74e6ae4 217 SUPERFAMILY SSF116726 134 213 4.32E-10 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DA442_21595 5186e64834a36701483d6f7ed74e6ae4 217 Gene3D G3DSA:3.30.70.1450 138 213 4.2E-9 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DA442_22990 871524064af157b37375336a464f4359 149 SUPERFAMILY SSF51182 25 147 2.45E-30 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DA442_22990 871524064af157b37375336a464f4359 149 Gene3D G3DSA:2.60.120.10 20 148 1.3E-46 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DA442_22990 871524064af157b37375336a464f4359 149 Pfam PF07883 Cupin domain 57 117 2.3E-8 T 14-10-2018 IPR013096 Cupin 2, conserved barrel DA442_02380 04a5bdffe53e849532eb8fcb72e72d0d 420 Gene3D G3DSA:3.90.640.10 235 300 2.2E-111 T 14-10-2018 DA442_02380 04a5bdffe53e849532eb8fcb72e72d0d 420 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 420 29.254 T 14-10-2018 IPR020823 Cell division protein FtsA DA442_02380 04a5bdffe53e849532eb8fcb72e72d0d 420 Gene3D G3DSA:3.30.420.40 197 359 2.2E-111 T 14-10-2018 DA442_02380 04a5bdffe53e849532eb8fcb72e72d0d 420 Gene3D G3DSA:3.30.1490.110 87 169 2.2E-111 T 14-10-2018 DA442_02380 04a5bdffe53e849532eb8fcb72e72d0d 420 SUPERFAMILY SSF53067 8 221 1.24E-59 T 14-10-2018 DA442_02380 04a5bdffe53e849532eb8fcb72e72d0d 420 Pfam PF02491 SHS2 domain inserted in FTSA 85 161 2.5E-28 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 DA442_02380 04a5bdffe53e849532eb8fcb72e72d0d 420 PIRSF PIRSF003101 1 420 3.2E-146 T 14-10-2018 IPR020823 Cell division protein FtsA DA442_02380 04a5bdffe53e849532eb8fcb72e72d0d 420 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 1.1E-150 T 14-10-2018 IPR020823 Cell division protein FtsA DA442_02380 04a5bdffe53e849532eb8fcb72e72d0d 420 SUPERFAMILY SSF53067 198 384 2.67E-45 T 14-10-2018 DA442_02380 04a5bdffe53e849532eb8fcb72e72d0d 420 SMART SM00842 10 196 6.1E-95 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 DA442_02380 04a5bdffe53e849532eb8fcb72e72d0d 420 Pfam PF14450 Cell division protein FtsA 207 381 8.7E-24 T 14-10-2018 DA442_02380 04a5bdffe53e849532eb8fcb72e72d0d 420 Gene3D G3DSA:3.30.420.40 13 379 2.2E-111 T 14-10-2018 DA442_00380 580154e3feceb7f69e2a3e1fd393c865 1046 Gene3D G3DSA:3.30.450.20 487 604 1.7E-18 T 14-10-2018 DA442_00380 580154e3feceb7f69e2a3e1fd393c865 1046 Pfam PF04392 ABC transporter substrate binding protein 42 282 6.7E-7 T 14-10-2018 IPR007487 ABC transporter, substrate-binding protein DA442_00380 580154e3feceb7f69e2a3e1fd393c865 1046 Pfam PF00563 EAL domain 799 1033 2.0E-58 T 14-10-2018 IPR001633 EAL domain DA442_00380 580154e3feceb7f69e2a3e1fd393c865 1046 Gene3D G3DSA:3.30.70.270 608 778 1.2E-45 T 14-10-2018 DA442_00380 580154e3feceb7f69e2a3e1fd393c865 1046 Gene3D G3DSA:3.40.50.2300 84 282 7.0E-10 T 14-10-2018 DA442_00380 580154e3feceb7f69e2a3e1fd393c865 1046 SUPERFAMILY SSF55785 359 482 3.66E-7 T 14-10-2018 IPR035965 PAS domain superfamily DA442_00380 580154e3feceb7f69e2a3e1fd393c865 1046 Gene3D G3DSA:3.30.450.20 358 486 5.4E-9 T 14-10-2018 DA442_00380 580154e3feceb7f69e2a3e1fd393c865 1046 Pfam PF13426 PAS domain 507 606 1.0E-9 T 14-10-2018 IPR000014 PAS domain DA442_00380 580154e3feceb7f69e2a3e1fd393c865 1046 SUPERFAMILY SSF141868 797 1044 2.35E-71 T 14-10-2018 IPR035919 EAL domain superfamily DA442_00380 580154e3feceb7f69e2a3e1fd393c865 1046 Gene3D G3DSA:3.40.50.2300 142 263 7.0E-10 T 14-10-2018 DA442_00380 580154e3feceb7f69e2a3e1fd393c865 1046 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 614 778 5.2E-33 T 14-10-2018 IPR000160 GGDEF domain DA442_00380 580154e3feceb7f69e2a3e1fd393c865 1046 Gene3D G3DSA:3.20.20.450 779 1040 1.9E-76 T 14-10-2018 IPR035919 EAL domain superfamily DA442_00380 580154e3feceb7f69e2a3e1fd393c865 1046 SUPERFAMILY SSF55073 623 779 2.82E-40 T 14-10-2018 IPR029787 Nucleotide cyclase DA442_00380 580154e3feceb7f69e2a3e1fd393c865 1046 Pfam PF00990 Diguanylate cyclase, GGDEF domain 618 775 7.4E-35 T 14-10-2018 IPR000160 GGDEF domain DA442_00380 580154e3feceb7f69e2a3e1fd393c865 1046 SMART SM00267 607 779 9.6E-43 T 14-10-2018 IPR000160 GGDEF domain DA442_00380 580154e3feceb7f69e2a3e1fd393c865 1046 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 367 491 1.4E-6 T 14-10-2018 IPR000014 PAS domain DA442_00380 580154e3feceb7f69e2a3e1fd393c865 1046 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 493 614 1.4E-15 T 14-10-2018 IPR000014 PAS domain DA442_00380 580154e3feceb7f69e2a3e1fd393c865 1046 SUPERFAMILY SSF55785 481 604 1.93E-19 T 14-10-2018 IPR035965 PAS domain superfamily DA442_00380 580154e3feceb7f69e2a3e1fd393c865 1046 SMART SM00091 371 438 210.0 T 14-10-2018 IPR000014 PAS domain DA442_00380 580154e3feceb7f69e2a3e1fd393c865 1046 SMART SM00091 496 563 5.5E-4 T 14-10-2018 IPR000014 PAS domain DA442_00380 580154e3feceb7f69e2a3e1fd393c865 1046 SMART SM00086 569 607 0.32 T 14-10-2018 IPR001610 PAC motif DA442_00380 580154e3feceb7f69e2a3e1fd393c865 1046 SMART SM00086 442 484 14.0 T 14-10-2018 IPR001610 PAC motif DA442_00380 580154e3feceb7f69e2a3e1fd393c865 1046 SMART SM00052 791 1038 2.1E-60 T 14-10-2018 IPR001633 EAL domain DA442_20840 3ae8eefbdecde9b176d8817752c69fbc 154 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 4 109 2.3E-25 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain DA442_20840 3ae8eefbdecde9b176d8817752c69fbc 154 PIRSF PIRSF006019 1 148 4.1E-44 T 14-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 DA442_20840 3ae8eefbdecde9b176d8817752c69fbc 154 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 67 99 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 DA442_20840 3ae8eefbdecde9b176d8817752c69fbc 154 SUPERFAMILY SSF53927 8 142 9.83E-32 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 DA442_20840 3ae8eefbdecde9b176d8817752c69fbc 154 Gene3D G3DSA:3.40.140.10 2 152 1.2E-40 T 14-10-2018 DA442_02630 687360613e0ec542c0c9b2f2c6e360e3 505 Pfam PF00152 tRNA synthetases class II (D, K and N) 156 501 2.7E-80 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DA442_02630 687360613e0ec542c0c9b2f2c6e360e3 505 SUPERFAMILY SSF55681 156 502 1.13E-118 T 14-10-2018 DA442_02630 687360613e0ec542c0c9b2f2c6e360e3 505 SUPERFAMILY SSF50249 12 149 1.69E-33 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_02630 687360613e0ec542c0c9b2f2c6e360e3 505 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 14 504 3.1E-200 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DA442_02630 687360613e0ec542c0c9b2f2c6e360e3 505 Gene3D G3DSA:3.30.930.10 152 505 2.5E-130 T 14-10-2018 DA442_02630 687360613e0ec542c0c9b2f2c6e360e3 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 193 203 7.8E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DA442_02630 687360613e0ec542c0c9b2f2c6e360e3 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 386 402 7.8E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DA442_02630 687360613e0ec542c0c9b2f2c6e360e3 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 256 273 7.8E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DA442_02630 687360613e0ec542c0c9b2f2c6e360e3 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 209 225 7.8E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DA442_02630 687360613e0ec542c0c9b2f2c6e360e3 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 238 251 7.8E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DA442_02630 687360613e0ec542c0c9b2f2c6e360e3 505 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 19 504 43.157 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DA442_02630 687360613e0ec542c0c9b2f2c6e360e3 505 Pfam PF01336 OB-fold nucleic acid binding domain 68 140 1.9E-8 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 DA442_02630 687360613e0ec542c0c9b2f2c6e360e3 505 Gene3D G3DSA:2.40.50.140 5 151 2.3E-29 T 14-10-2018 DA442_01925 8a43597352607ff4c01ddbfdcbaa573a 253 SUPERFAMILY SSF100950 78 234 2.18E-31 T 14-10-2018 IPR037171 NagB/RpiA transferase-like DA442_01925 8a43597352607ff4c01ddbfdcbaa573a 253 Pfam PF08220 DeoR-like helix-turn-helix domain 9 62 1.9E-15 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DA442_01925 8a43597352607ff4c01ddbfdcbaa573a 253 SUPERFAMILY SSF46785 3 67 4.69E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_01925 8a43597352607ff4c01ddbfdcbaa573a 253 SMART SM01134 73 234 2.4E-58 T 14-10-2018 DA442_01925 8a43597352607ff4c01ddbfdcbaa573a 253 SMART SM00420 9 61 7.3E-14 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DA442_01925 8a43597352607ff4c01ddbfdcbaa573a 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 DA442_01925 8a43597352607ff4c01ddbfdcbaa573a 253 Pfam PF00455 DeoR C terminal sensor domain 77 232 4.1E-45 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain DA442_01925 8a43597352607ff4c01ddbfdcbaa573a 253 Gene3D G3DSA:1.10.10.10 1 56 4.0E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_01925 8a43597352607ff4c01ddbfdcbaa573a 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 2.3E-6 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DA442_01925 8a43597352607ff4c01ddbfdcbaa573a 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 2.3E-6 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DA442_14495 9112685dc6fdcceead3f82a419a65655 546 Pfam PF00117 Glutamine amidotransferase class-I 301 535 5.6E-62 T 14-10-2018 IPR017926 Glutamine amidotransferase DA442_14495 9112685dc6fdcceead3f82a419a65655 546 Gene3D G3DSA:3.40.50.880 286 543 1.8E-105 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DA442_14495 9112685dc6fdcceead3f82a419a65655 546 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.318 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 DA442_14495 9112685dc6fdcceead3f82a419a65655 546 Gene3D G3DSA:3.40.50.300 1 285 2.2E-133 T 14-10-2018 DA442_14495 9112685dc6fdcceead3f82a419a65655 546 SUPERFAMILY SSF52540 3 269 2.13E-121 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_14495 9112685dc6fdcceead3f82a419a65655 546 Pfam PF06418 CTP synthase N-terminus 5 265 1.3E-124 T 14-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 DA442_14495 9112685dc6fdcceead3f82a419a65655 546 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 6.6E-260 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 DA442_14495 9112685dc6fdcceead3f82a419a65655 546 SUPERFAMILY SSF52317 289 539 2.75E-88 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DA442_23460 02ab5db42c47865b2d76b0ab0da3a310 848 SMART SM00636 159 575 8.5E-162 T 14-10-2018 IPR011583 Chitinase II GO:0008061 DA442_23460 02ab5db42c47865b2d76b0ab0da3a310 848 SUPERFAMILY SSF54556 461 546 6.87E-17 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily DA442_23460 02ab5db42c47865b2d76b0ab0da3a310 848 Pfam PF08329 Chitinase A, N-terminal domain 21 156 8.6E-56 T 14-10-2018 IPR013540 Chitinase A N-terminal GO:0004568|GO:0006032 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 DA442_23460 02ab5db42c47865b2d76b0ab0da3a310 848 Pfam PF02839 Carbohydrate binding domain 814 839 1.4E-5 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 DA442_23460 02ab5db42c47865b2d76b0ab0da3a310 848 Gene3D G3DSA:2.60.40.10 22 132 2.1E-45 T 14-10-2018 IPR013783 Immunoglobulin-like fold DA442_23460 02ab5db42c47865b2d76b0ab0da3a310 848 SUPERFAMILY SSF51445 135 588 7.33E-92 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DA442_23460 02ab5db42c47865b2d76b0ab0da3a310 848 Gene3D G3DSA:2.60.40.10 597 692 4.2E-22 T 14-10-2018 IPR013783 Immunoglobulin-like fold DA442_23460 02ab5db42c47865b2d76b0ab0da3a310 848 Gene3D G3DSA:3.10.50.10 466 551 1.0E-175 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily DA442_23460 02ab5db42c47865b2d76b0ab0da3a310 848 Gene3D G3DSA:2.60.40.10 694 785 8.0E-11 T 14-10-2018 IPR013783 Immunoglobulin-like fold DA442_23460 02ab5db42c47865b2d76b0ab0da3a310 848 SMART SM00089 62 134 0.88 T 14-10-2018 IPR022409 PKD/Chitinase domain DA442_23460 02ab5db42c47865b2d76b0ab0da3a310 848 SMART SM00089 701 787 2.6 T 14-10-2018 IPR022409 PKD/Chitinase domain DA442_23460 02ab5db42c47865b2d76b0ab0da3a310 848 SMART SM00089 600 690 0.01 T 14-10-2018 IPR022409 PKD/Chitinase domain DA442_23460 02ab5db42c47865b2d76b0ab0da3a310 848 Gene3D G3DSA:2.10.10.20 796 840 2.1E-18 T 14-10-2018 DA442_23460 02ab5db42c47865b2d76b0ab0da3a310 848 ProSitePatterns PS01095 Chitinases family 18 active site. 307 315 - T 14-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 DA442_23460 02ab5db42c47865b2d76b0ab0da3a310 848 SMART SM00495 797 842 1.0E-14 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 DA442_23460 02ab5db42c47865b2d76b0ab0da3a310 848 Pfam PF02010 REJ domain 664 786 6.0E-5 T 14-10-2018 IPR002859 PKD/REJ-like domain DA442_23460 02ab5db42c47865b2d76b0ab0da3a310 848 SUPERFAMILY SSF49299 596 689 5.1E-7 T 14-10-2018 IPR035986 PKD domain superfamily DA442_23460 02ab5db42c47865b2d76b0ab0da3a310 848 Pfam PF00704 Glycosyl hydrolases family 18 162 575 1.8E-89 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 DA442_23460 02ab5db42c47865b2d76b0ab0da3a310 848 SUPERFAMILY SSF81296 21 133 7.14E-33 T 14-10-2018 IPR014756 Immunoglobulin E-set DA442_23460 02ab5db42c47865b2d76b0ab0da3a310 848 SUPERFAMILY SSF51055 783 843 2.88E-15 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 DA442_23460 02ab5db42c47865b2d76b0ab0da3a310 848 Gene3D G3DSA:3.20.20.80 162 577 1.0E-175 T 14-10-2018 DA442_20265 c4573ac013a337615937f2b2d60f90e6 305 PRINTS PR00990 Ribokinase signature 33 52 2.9E-35 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DA442_20265 c4573ac013a337615937f2b2d60f90e6 305 PRINTS PR00990 Ribokinase signature 217 228 2.9E-35 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DA442_20265 c4573ac013a337615937f2b2d60f90e6 305 PRINTS PR00990 Ribokinase signature 173 188 2.9E-35 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DA442_20265 c4573ac013a337615937f2b2d60f90e6 305 PRINTS PR00990 Ribokinase signature 6 27 2.9E-35 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DA442_20265 c4573ac013a337615937f2b2d60f90e6 305 PRINTS PR00990 Ribokinase signature 105 118 2.9E-35 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DA442_20265 c4573ac013a337615937f2b2d60f90e6 305 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 5 299 1.5E-112 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 DA442_20265 c4573ac013a337615937f2b2d60f90e6 305 Hamap MF_01987 Ribokinase [rbsK]. 2 301 26.532 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 DA442_20265 c4573ac013a337615937f2b2d60f90e6 305 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 246 259 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DA442_20265 c4573ac013a337615937f2b2d60f90e6 305 Gene3D G3DSA:3.40.1190.20 1 300 1.3E-106 T 14-10-2018 IPR029056 Ribokinase-like DA442_20265 c4573ac013a337615937f2b2d60f90e6 305 Pfam PF00294 pfkB family carbohydrate kinase 1 294 4.7E-76 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB DA442_20265 c4573ac013a337615937f2b2d60f90e6 305 SUPERFAMILY SSF53613 1 302 9.04E-87 T 14-10-2018 IPR029056 Ribokinase-like DA442_01220 eba24361a33a3b472dc6a1c3bd647b88 239 PIRSF PIRSF028162 1 239 7.5E-93 T 14-10-2018 IPR016873 Capsular polysaccharide biosynthesis protein, BcbE, predicted DA442_01220 eba24361a33a3b472dc6a1c3bd647b88 239 Gene3D G3DSA:3.90.550.10 1 238 4.9E-62 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DA442_01220 eba24361a33a3b472dc6a1c3bd647b88 239 SUPERFAMILY SSF53448 2 234 4.86E-23 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DA442_00850 8d2f280c32722a22f86f05aa8bc74d27 210 Gene3D G3DSA:3.30.1150.10 113 209 1.8E-20 T 14-10-2018 DA442_00850 8d2f280c32722a22f86f05aa8bc74d27 210 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 133 209 8.3E-13 T 14-10-2018 IPR006260 TonB/TolA, C-terminal DA442_00850 8d2f280c32722a22f86f05aa8bc74d27 210 SUPERFAMILY SSF74653 122 207 1.44E-17 T 14-10-2018 DA442_00850 8d2f280c32722a22f86f05aa8bc74d27 210 PRINTS PR01374 Gram-negative bacterial tonB protein signature 59 69 8.2E-5 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 DA442_00850 8d2f280c32722a22f86f05aa8bc74d27 210 PRINTS PR01374 Gram-negative bacterial tonB protein signature 147 165 8.2E-5 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 DA442_00850 8d2f280c32722a22f86f05aa8bc74d27 210 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 130 208 1.3E-15 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 DA442_24510 222459c6389dee6929c8fc879c966656 86 Pfam PF03891 Domain of unknown function (DUF333) 34 78 9.0E-18 T 14-10-2018 IPR005590 Protein of unknown function DUF333 DA442_16150 b661bce73a5130d9e6b24dbb0c6b45a9 246 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 DA442_16150 b661bce73a5130d9e6b24dbb0c6b45a9 246 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 111 1.6E-32 T 14-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 DA442_16150 b661bce73a5130d9e6b24dbb0c6b45a9 246 SUPERFAMILY SSF54292 5 106 1.04E-29 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DA442_16150 b661bce73a5130d9e6b24dbb0c6b45a9 246 Gene3D G3DSA:3.10.20.30 1 106 3.8E-35 T 14-10-2018 IPR012675 Beta-grasp domain superfamily DA442_16150 b661bce73a5130d9e6b24dbb0c6b45a9 246 Gene3D G3DSA:1.10.1060.10 107 244 1.8E-50 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DA442_16150 b661bce73a5130d9e6b24dbb0c6b45a9 246 Pfam PF13183 4Fe-4S dicluster domain 147 219 5.9E-11 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DA442_16150 b661bce73a5130d9e6b24dbb0c6b45a9 246 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DA442_16150 b661bce73a5130d9e6b24dbb0c6b45a9 246 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 4.0E-95 T 14-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 DA442_16150 b661bce73a5130d9e6b24dbb0c6b45a9 246 SUPERFAMILY SSF46548 107 226 6.1E-31 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DA442_08865 c69dc6e3cad2e078658da6aa36e3a06c 632 Gene3D G3DSA:3.55.50.30 31 115 9.6E-30 T 14-10-2018 DA442_08865 c69dc6e3cad2e078658da6aa36e3a06c 632 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 514 533 5.8E-39 T 14-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 DA442_08865 c69dc6e3cad2e078658da6aa36e3a06c 632 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 422 437 5.8E-39 T 14-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 DA442_08865 c69dc6e3cad2e078658da6aa36e3a06c 632 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 388 407 5.8E-39 T 14-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 DA442_08865 c69dc6e3cad2e078658da6aa36e3a06c 632 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 204 221 5.8E-39 T 14-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 DA442_08865 c69dc6e3cad2e078658da6aa36e3a06c 632 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 304 324 5.8E-39 T 14-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 DA442_08865 c69dc6e3cad2e078658da6aa36e3a06c 632 TIGRFAM TIGR02516 type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family 44 536 3.5E-150 T 14-10-2018 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 DA442_08865 c69dc6e3cad2e078658da6aa36e3a06c 632 Gene3D G3DSA:3.30.1370.120 116 184 2.2E-13 T 14-10-2018 IPR038591 NolW-like superfamily DA442_08865 c69dc6e3cad2e078658da6aa36e3a06c 632 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 481 514 - T 14-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 DA442_08865 c69dc6e3cad2e078658da6aa36e3a06c 632 Pfam PF03958 Bacterial type II/III secretion system short domain 192 301 4.1E-15 T 14-10-2018 IPR005644 NolW-like DA442_08865 c69dc6e3cad2e078658da6aa36e3a06c 632 Pfam PF00263 Bacterial type II and III secretion system protein 375 535 2.6E-36 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 DA442_08865 c69dc6e3cad2e078658da6aa36e3a06c 632 Gene3D G3DSA:3.30.1370.120 191 301 4.7E-9 T 14-10-2018 IPR038591 NolW-like superfamily DA442_13620 3094e90d9563345b3e786aaad8349b08 230 Pfam PF13098 Thioredoxin-like domain 106 214 8.9E-15 T 14-10-2018 IPR012336 Thioredoxin-like fold DA442_13620 3094e90d9563345b3e786aaad8349b08 230 Gene3D G3DSA:3.10.450.70 29 76 2.4E-7 T 14-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 DA442_13620 3094e90d9563345b3e786aaad8349b08 230 Pfam PF10411 Disulfide bond isomerase protein N-terminus 23 72 1.4E-8 T 14-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal DA442_13620 3094e90d9563345b3e786aaad8349b08 230 Gene3D G3DSA:3.40.30.10 101 229 3.0E-33 T 14-10-2018 DA442_13620 3094e90d9563345b3e786aaad8349b08 230 SUPERFAMILY SSF54423 30 74 1.96E-8 T 14-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 DA442_13620 3094e90d9563345b3e786aaad8349b08 230 SUPERFAMILY SSF52833 61 219 1.42E-20 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_15580 0434b8f5a05bcdaa7fd0ca134c8e4546 129 Gene3D G3DSA:3.30.70.60 1 92 4.2E-33 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 DA442_15580 0434b8f5a05bcdaa7fd0ca134c8e4546 129 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 22.163 T 14-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 DA442_15580 0434b8f5a05bcdaa7fd0ca134c8e4546 129 SUPERFAMILY SSF54995 1 103 2.09E-38 T 14-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_15580 0434b8f5a05bcdaa7fd0ca134c8e4546 129 Pfam PF01250 Ribosomal protein S6 3 91 1.4E-28 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_15580 0434b8f5a05bcdaa7fd0ca134c8e4546 129 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 14-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 DA442_15580 0434b8f5a05bcdaa7fd0ca134c8e4546 129 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 7.9E-39 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_00100 cce5d530c691a3fcb5bb5c94f6d0cc85 723 SUPERFAMILY SSF52096 2 304 7.27E-66 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DA442_00100 cce5d530c691a3fcb5bb5c94f6d0cc85 723 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 209 7.7E-39 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 DA442_00100 cce5d530c691a3fcb5bb5c94f6d0cc85 723 Gene3D G3DSA:1.10.1040.50 498 710 4.4E-73 T 14-10-2018 DA442_00100 cce5d530c691a3fcb5bb5c94f6d0cc85 723 Gene3D G3DSA:3.90.226.10 1 312 3.7E-89 T 14-10-2018 DA442_00100 cce5d530c691a3fcb5bb5c94f6d0cc85 723 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 518 - T 14-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DA442_00100 cce5d530c691a3fcb5bb5c94f6d0cc85 723 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 716 52.006 T 14-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DA442_00100 cce5d530c691a3fcb5bb5c94f6d0cc85 723 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 715 0.0 T 14-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DA442_00100 cce5d530c691a3fcb5bb5c94f6d0cc85 723 SUPERFAMILY SSF48179 625 715 1.02E-24 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DA442_00100 cce5d530c691a3fcb5bb5c94f6d0cc85 723 Gene3D G3DSA:3.40.50.720 315 497 5.1E-64 T 14-10-2018 DA442_00100 cce5d530c691a3fcb5bb5c94f6d0cc85 723 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 317 495 1.1E-56 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DA442_00100 cce5d530c691a3fcb5bb5c94f6d0cc85 723 SUPERFAMILY SSF48179 496 605 4.51E-28 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DA442_00100 cce5d530c691a3fcb5bb5c94f6d0cc85 723 SUPERFAMILY SSF51735 315 496 2.23E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_00100 cce5d530c691a3fcb5bb5c94f6d0cc85 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 593 3.4E-25 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DA442_00100 cce5d530c691a3fcb5bb5c94f6d0cc85 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 628 710 6.4E-6 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DA442_11800 b1d84c569586ddbff5b650c541c9ef28 138 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 5 136 8.3E-69 T 14-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 DA442_11800 b1d84c569586ddbff5b650c541c9ef28 138 ProSitePatterns PS00934 Glyoxalase I signature 1. 8 29 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 DA442_11800 b1d84c569586ddbff5b650c541c9ef28 138 SUPERFAMILY SSF54593 3 130 3.76E-36 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DA442_11800 b1d84c569586ddbff5b650c541c9ef28 138 Gene3D G3DSA:3.10.180.10 3 135 4.0E-50 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DA442_11800 b1d84c569586ddbff5b650c541c9ef28 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 126 6.4E-24 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DA442_11800 b1d84c569586ddbff5b650c541c9ef28 138 ProSitePatterns PS00935 Glyoxalase I signature 2. 72 84 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 DA442_12390 fc5181b521cd6171871ed345ab7d2fac 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 5.6E-17 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DA442_12390 fc5181b521cd6171871ed345ab7d2fac 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 5.6E-17 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DA442_12390 fc5181b521cd6171871ed345ab7d2fac 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 5.6E-17 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DA442_12390 fc5181b521cd6171871ed345ab7d2fac 89 PIRSF PIRSF004669 1 89 1.2E-29 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DA442_12390 fc5181b521cd6171871ed345ab7d2fac 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 1.2E-32 T 14-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 DA442_12390 fc5181b521cd6171871ed345ab7d2fac 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 2.5E-28 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DA442_19205 3521b2bea56456590cd257b987388641 568 Gene3D G3DSA:3.40.190.10 122 312 2.5E-41 T 14-10-2018 DA442_19205 3521b2bea56456590cd257b987388641 568 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 307 9.2E-22 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain DA442_19205 3521b2bea56456590cd257b987388641 568 SUPERFAMILY SSF53850 120 557 2.9E-62 T 14-10-2018 DA442_19205 3521b2bea56456590cd257b987388641 568 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 119 7.3E-37 T 14-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain DA442_18495 ad174b31a766e7ba7453449d8328ee6a 421 Gene3D G3DSA:3.30.450.380 2 166 5.0E-37 T 14-10-2018 DA442_18495 ad174b31a766e7ba7453449d8328ee6a 421 Pfam PF00437 Type II/IV secretion system protein 71 347 7.7E-82 T 14-10-2018 IPR001482 Type II/IV secretion system protein DA442_18495 ad174b31a766e7ba7453449d8328ee6a 421 Gene3D G3DSA:3.40.50.300 168 408 3.5E-72 T 14-10-2018 DA442_18495 ad174b31a766e7ba7453449d8328ee6a 421 SUPERFAMILY SSF52540 56 364 2.47E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_17085 7ba05d32130f05a911522b9202955d5a 437 Gene3D G3DSA:3.40.50.300 2 222 5.6E-72 T 14-10-2018 DA442_17085 7ba05d32130f05a911522b9202955d5a 437 Gene3D G3DSA:3.40.50.300 229 406 1.2E-46 T 14-10-2018 DA442_17085 7ba05d32130f05a911522b9202955d5a 437 SMART SM00490 270 351 1.2E-32 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_17085 7ba05d32130f05a911522b9202955d5a 437 SMART SM00487 28 234 1.4E-53 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DA442_17085 7ba05d32130f05a911522b9202955d5a 437 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DA442_17085 7ba05d32130f05a911522b9202955d5a 437 Pfam PF00271 Helicase conserved C-terminal domain 243 351 1.6E-30 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_17085 7ba05d32130f05a911522b9202955d5a 437 SUPERFAMILY SSF52540 85 363 1.57E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_17085 7ba05d32130f05a911522b9202955d5a 437 Pfam PF00270 DEAD/DEAH box helicase 33 207 1.1E-45 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DA442_17085 7ba05d32130f05a911522b9202955d5a 437 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.667 T 14-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 DA442_00300 00f45d5c7020d7a2dd07fbd59d13b68d 450 SUPERFAMILY SSF56112 73 281 5.8E-52 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily DA442_00300 00f45d5c7020d7a2dd07fbd59d13b68d 450 SMART SM00220 79 325 7.8E-28 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 DA442_00300 00f45d5c7020d7a2dd07fbd59d13b68d 450 Gene3D G3DSA:1.10.510.10 164 336 5.9E-27 T 14-10-2018 DA442_00300 00f45d5c7020d7a2dd07fbd59d13b68d 450 Pfam PF00069 Protein kinase domain 79 280 3.0E-38 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 DA442_00300 00f45d5c7020d7a2dd07fbd59d13b68d 450 Gene3D G3DSA:3.30.200.20 70 158 5.6E-21 T 14-10-2018 DA442_00300 00f45d5c7020d7a2dd07fbd59d13b68d 450 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 85 110 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 DA442_00300 00f45d5c7020d7a2dd07fbd59d13b68d 450 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 198 210 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 DA442_15870 aebb3db6967e296622035483a0402c8b 195 Gene3D G3DSA:3.40.50.880 1 193 5.1E-61 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DA442_15870 aebb3db6967e296622035483a0402c8b 195 SUPERFAMILY SSF52317 1 191 1.65E-53 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DA442_15870 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00097 Anthranilate synthase component II signature 47 56 3.7E-36 T 14-10-2018 DA442_15870 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00097 Anthranilate synthase component II signature 74 85 3.7E-36 T 14-10-2018 DA442_15870 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.7E-36 T 14-10-2018 DA442_15870 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00097 Anthranilate synthase component II signature 99 107 3.7E-36 T 14-10-2018 DA442_15870 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00097 Anthranilate synthase component II signature 2 16 3.7E-36 T 14-10-2018 DA442_15870 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00097 Anthranilate synthase component II signature 119 131 3.7E-36 T 14-10-2018 DA442_15870 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 5.4E-5 T 14-10-2018 DA442_15870 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 5.4E-5 T 14-10-2018 DA442_15870 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 4.4E-13 T 14-10-2018 DA442_15870 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 4.4E-13 T 14-10-2018 DA442_15870 aebb3db6967e296622035483a0402c8b 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 4.4E-13 T 14-10-2018 DA442_15870 aebb3db6967e296622035483a0402c8b 195 Pfam PF00117 Glutamine amidotransferase class-I 4 191 2.3E-54 T 14-10-2018 IPR017926 Glutamine amidotransferase DA442_15870 aebb3db6967e296622035483a0402c8b 195 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 192 1.8E-85 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DA442_25625 5b127c6b4b39caf50ab74ecc572d6d3d 308 Pfam PF00005 ABC transporter 22 165 1.2E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_25625 5b127c6b4b39caf50ab74ecc572d6d3d 308 SUPERFAMILY SSF52540 4 227 8.99E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_25625 5b127c6b4b39caf50ab74ecc572d6d3d 308 Gene3D G3DSA:3.40.50.300 1 243 2.1E-72 T 14-10-2018 DA442_25625 5b127c6b4b39caf50ab74ecc572d6d3d 308 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_25625 5b127c6b4b39caf50ab74ecc572d6d3d 308 SMART SM00382 30 212 3.2E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_01135 b6a618c8c7b3fa86170f30c6d4095ce2 253 SUPERFAMILY SSF51735 3 253 8.72E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_01135 b6a618c8c7b3fa86170f30c6d4095ce2 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 8.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_01135 b6a618c8c7b3fa86170f30c6d4095ce2 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 8.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_01135 b6a618c8c7b3fa86170f30c6d4095ce2 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 8.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_01135 b6a618c8c7b3fa86170f30c6d4095ce2 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 8.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_01135 b6a618c8c7b3fa86170f30c6d4095ce2 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 8.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_01135 b6a618c8c7b3fa86170f30c6d4095ce2 253 Gene3D G3DSA:3.40.50.720 1 253 2.4E-35 T 14-10-2018 DA442_01135 b6a618c8c7b3fa86170f30c6d4095ce2 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 252 6.3E-26 T 14-10-2018 DA442_16315 74b626196ad835537cf28fb305df00e3 461 Gene3D G3DSA:1.10.40.30 403 454 2.3E-18 T 14-10-2018 DA442_16315 74b626196ad835537cf28fb305df00e3 461 ProSitePatterns PS00163 Fumarate lyases signature. 312 321 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 DA442_16315 74b626196ad835537cf28fb305df00e3 461 PRINTS PR00149 Fumarate lyase superfamily signature 175 193 1.5E-31 T 14-10-2018 IPR000362 Fumarate lyase family DA442_16315 74b626196ad835537cf28fb305df00e3 461 PRINTS PR00149 Fumarate lyase superfamily signature 266 293 1.5E-31 T 14-10-2018 IPR000362 Fumarate lyase family DA442_16315 74b626196ad835537cf28fb305df00e3 461 PRINTS PR00149 Fumarate lyase superfamily signature 129 147 1.5E-31 T 14-10-2018 IPR000362 Fumarate lyase family DA442_16315 74b626196ad835537cf28fb305df00e3 461 PRINTS PR00149 Fumarate lyase superfamily signature 312 328 1.5E-31 T 14-10-2018 IPR000362 Fumarate lyase family DA442_16315 74b626196ad835537cf28fb305df00e3 461 Hamap MF_00743 Fumarate hydratase class II [fumC]. 5 457 74.345 T 14-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DA442_16315 74b626196ad835537cf28fb305df00e3 461 SUPERFAMILY SSF48557 5 455 2.98E-133 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 DA442_16315 74b626196ad835537cf28fb305df00e3 461 PRINTS PR00145 Argininosuccinate lyase family signature 170 190 5.3E-6 T 14-10-2018 DA442_16315 74b626196ad835537cf28fb305df00e3 461 PRINTS PR00145 Argininosuccinate lyase family signature 128 150 5.3E-6 T 14-10-2018 DA442_16315 74b626196ad835537cf28fb305df00e3 461 PRINTS PR00145 Argininosuccinate lyase family signature 312 328 5.3E-6 T 14-10-2018 DA442_16315 74b626196ad835537cf28fb305df00e3 461 Pfam PF10415 Fumarase C C-terminus 403 455 5.4E-19 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DA442_16315 74b626196ad835537cf28fb305df00e3 461 Gene3D G3DSA:1.10.275.10 3 133 2.2E-48 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal DA442_16315 74b626196ad835537cf28fb305df00e3 461 Gene3D G3DSA:1.20.200.10 134 400 2.5E-93 T 14-10-2018 DA442_16315 74b626196ad835537cf28fb305df00e3 461 Pfam PF00206 Lyase 13 337 4.8E-91 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal DA442_12575 5169829e731f02ae4e71043cd711b466 156 SUPERFAMILY SSF52833 4 154 7.81E-48 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_12575 5169829e731f02ae4e71043cd711b466 156 Pfam PF00578 AhpC/TSA family 7 134 1.7E-35 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DA442_12575 5169829e731f02ae4e71043cd711b466 156 PIRSF PIRSF000239 1 147 5.2E-18 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DA442_12575 5169829e731f02ae4e71043cd711b466 156 Gene3D G3DSA:3.40.30.10 3 155 6.2E-46 T 14-10-2018 DA442_02415 c93dadaefd81d114945f85e754afcb2a 379 Gene3D G3DSA:3.50.30.20 2 151 2.8E-62 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DA442_02415 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.2E-5 T 14-10-2018 DA442_02415 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.2E-5 T 14-10-2018 DA442_02415 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.2E-5 T 14-10-2018 DA442_02415 c93dadaefd81d114945f85e754afcb2a 379 SUPERFAMILY SSF52317 153 377 2.14E-63 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DA442_02415 c93dadaefd81d114945f85e754afcb2a 379 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 48.871 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DA442_02415 c93dadaefd81d114945f85e754afcb2a 379 Gene3D G3DSA:3.40.50.880 152 378 9.2E-77 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DA442_02415 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 3.9E-11 T 14-10-2018 DA442_02415 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 3.9E-11 T 14-10-2018 DA442_02415 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 3.9E-11 T 14-10-2018 DA442_02415 c93dadaefd81d114945f85e754afcb2a 379 Pfam PF00117 Glutamine amidotransferase class-I 197 372 3.1E-47 T 14-10-2018 IPR017926 Glutamine amidotransferase DA442_02415 c93dadaefd81d114945f85e754afcb2a 379 SMART SM01097 3 133 3.8E-93 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DA442_02415 c93dadaefd81d114945f85e754afcb2a 379 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 376 1.8E-150 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DA442_02415 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 1.4E-39 T 14-10-2018 DA442_02415 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 1.4E-39 T 14-10-2018 DA442_02415 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 1.4E-39 T 14-10-2018 DA442_02415 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 1.4E-39 T 14-10-2018 DA442_02415 c93dadaefd81d114945f85e754afcb2a 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 1.4E-39 T 14-10-2018 DA442_02415 c93dadaefd81d114945f85e754afcb2a 379 SUPERFAMILY SSF52021 5 142 7.06E-58 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DA442_02415 c93dadaefd81d114945f85e754afcb2a 379 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 4.0E-53 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DA442_04555 20bacbee897bd22c480137824f114753 385 Pfam PF01612 3'-5' exonuclease 16 183 6.8E-41 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 DA442_04555 20bacbee897bd22c480137824f114753 385 SUPERFAMILY SSF47819 309 384 6.21E-22 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 DA442_04555 20bacbee897bd22c480137824f114753 385 SMART SM00474 16 184 1.4E-43 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 DA442_04555 20bacbee897bd22c480137824f114753 385 Gene3D G3DSA:3.30.420.10 14 207 2.2E-68 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DA442_04555 20bacbee897bd22c480137824f114753 385 Pfam PF00570 HRDC domain 226 292 1.1E-9 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 DA442_04555 20bacbee897bd22c480137824f114753 385 Hamap MF_01899 Ribonuclease D [rnd]. 16 385 44.208 T 14-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 DA442_04555 20bacbee897bd22c480137824f114753 385 TIGRFAM TIGR01388 rnd: ribonuclease D 18 382 5.4E-148 T 14-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 DA442_04555 20bacbee897bd22c480137824f114753 385 SUPERFAMILY SSF47819 207 314 4.14E-24 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 DA442_04555 20bacbee897bd22c480137824f114753 385 Gene3D G3DSA:1.10.150.80 209 306 2.0E-18 T 14-10-2018 DA442_04555 20bacbee897bd22c480137824f114753 385 Gene3D G3DSA:1.10.150.80 307 385 9.0E-29 T 14-10-2018 DA442_04555 20bacbee897bd22c480137824f114753 385 SUPERFAMILY SSF53098 9 222 4.26E-71 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DA442_20115 c72ee32edc8742f670a14d15f1ce917b 111 SUPERFAMILY SSF50022 5 106 2.68E-33 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DA442_20115 c72ee32edc8742f670a14d15f1ce917b 111 Gene3D G3DSA:2.102.10.10 2 109 1.2E-33 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DA442_20115 c72ee32edc8742f670a14d15f1ce917b 111 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 7 106 4.1E-33 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 DA442_20115 c72ee32edc8742f670a14d15f1ce917b 111 Pfam PF13806 Rieske-like [2Fe-2S] domain 7 105 2.1E-33 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 DA442_21620 fd5b545544fb3fbab79c9707e6d35523 261 SMART SM00382 26 214 1.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_21620 fd5b545544fb3fbab79c9707e6d35523 261 Gene3D G3DSA:3.40.50.300 1 255 1.6E-60 T 14-10-2018 DA442_21620 fd5b545544fb3fbab79c9707e6d35523 261 Pfam PF00005 ABC transporter 22 166 3.6E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_21620 fd5b545544fb3fbab79c9707e6d35523 261 SUPERFAMILY SSF52540 4 222 3.06E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_21620 fd5b545544fb3fbab79c9707e6d35523 261 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_14125 31bb5f24d7fd99b8099038bfad589f41 238 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 4 229 1.2E-76 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein DA442_14125 31bb5f24d7fd99b8099038bfad589f41 238 Gene3D G3DSA:3.40.1350.60 81 237 5.9E-54 T 14-10-2018 DA442_14125 31bb5f24d7fd99b8099038bfad589f41 238 Pfam PF03749 Sugar fermentation stimulation protein 13 229 4.3E-75 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein DA442_14125 31bb5f24d7fd99b8099038bfad589f41 238 Gene3D G3DSA:2.40.50.580 1 80 1.3E-28 T 14-10-2018 DA442_14125 31bb5f24d7fd99b8099038bfad589f41 238 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 238 56.538 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein DA442_03500 dbc986f5d8ed8f1ce7f85f0b82388405 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 2.4E-55 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DA442_03500 dbc986f5d8ed8f1ce7f85f0b82388405 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 9.7E-58 T 14-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DA442_03500 dbc986f5d8ed8f1ce7f85f0b82388405 156 SUPERFAMILY SSF52121 4 154 4.58E-61 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DA442_03500 dbc986f5d8ed8f1ce7f85f0b82388405 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.315 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DA442_03500 dbc986f5d8ed8f1ce7f85f0b82388405 156 Gene3D G3DSA:3.40.50.960 1 156 1.9E-64 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DA442_05055 1f0b8cc0aedb7bf7c4e0efe24837c777 116 Pfam PF01230 HIT domain 12 109 2.5E-29 T 14-10-2018 IPR001310 Histidine triad (HIT) protein DA442_05055 1f0b8cc0aedb7bf7c4e0efe24837c777 116 PRINTS PR00332 Histidine triad family signature 6 22 2.2E-19 T 14-10-2018 IPR001310 Histidine triad (HIT) protein DA442_05055 1f0b8cc0aedb7bf7c4e0efe24837c777 116 PRINTS PR00332 Histidine triad family signature 27 45 2.2E-19 T 14-10-2018 IPR001310 Histidine triad (HIT) protein DA442_05055 1f0b8cc0aedb7bf7c4e0efe24837c777 116 PRINTS PR00332 Histidine triad family signature 95 105 2.2E-19 T 14-10-2018 IPR001310 Histidine triad (HIT) protein DA442_05055 1f0b8cc0aedb7bf7c4e0efe24837c777 116 Gene3D G3DSA:3.30.428.10 1 111 8.9E-36 T 14-10-2018 IPR036265 HIT-like superfamily DA442_05055 1f0b8cc0aedb7bf7c4e0efe24837c777 116 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 14-10-2018 IPR019808 Histidine triad, conserved site DA442_05055 1f0b8cc0aedb7bf7c4e0efe24837c777 116 SUPERFAMILY SSF54197 2 112 3.56E-35 T 14-10-2018 IPR036265 HIT-like superfamily DA442_12785 2dafe22dc75f80d76941867531d18725 185 Gene3D G3DSA:1.10.132.20 101 185 5.8E-29 T 14-10-2018 DA442_12785 2dafe22dc75f80d76941867531d18725 185 Gene3D G3DSA:1.10.132.20 1 34 1.1E-10 T 14-10-2018 DA442_12785 2dafe22dc75f80d76941867531d18725 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 2.1E-77 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 DA442_12785 2dafe22dc75f80d76941867531d18725 185 SUPERFAMILY SSF55194 2 184 1.01E-71 T 14-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 DA442_12785 2dafe22dc75f80d76941867531d18725 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.833 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 DA442_12785 2dafe22dc75f80d76941867531d18725 185 Pfam PF01765 Ribosome recycling factor 20 183 9.6E-63 T 14-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 DA442_12785 2dafe22dc75f80d76941867531d18725 185 Gene3D G3DSA:3.30.1360.40 35 100 7.8E-31 T 14-10-2018 DA442_12740 a1fdfa1df8f5a52d59f64a581c45e5d8 262 SUPERFAMILY SSF51161 1 262 5.99E-74 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily DA442_12740 a1fdfa1df8f5a52d59f64a581c45e5d8 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 6.6E-25 T 14-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 DA442_12740 a1fdfa1df8f5a52d59f64a581c45e5d8 262 Gene3D G3DSA:1.20.1180.10 197 262 9.4E-22 T 14-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 DA442_12740 a1fdfa1df8f5a52d59f64a581c45e5d8 262 Gene3D G3DSA:2.160.10.10 1 196 8.4E-51 T 14-10-2018 DA442_12740 a1fdfa1df8f5a52d59f64a581c45e5d8 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 2.9E-7 T 14-10-2018 IPR001451 Hexapeptide repeat DA442_12740 a1fdfa1df8f5a52d59f64a581c45e5d8 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 36 69 3.5E-5 T 14-10-2018 IPR001451 Hexapeptide repeat DA442_12740 a1fdfa1df8f5a52d59f64a581c45e5d8 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 2 33 2.4E-6 T 14-10-2018 IPR001451 Hexapeptide repeat DA442_12740 a1fdfa1df8f5a52d59f64a581c45e5d8 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 5.1E-95 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 DA442_12740 a1fdfa1df8f5a52d59f64a581c45e5d8 262 PIRSF PIRSF000456 4 262 1.2E-95 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 DA442_12740 a1fdfa1df8f5a52d59f64a581c45e5d8 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 42.67 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 DA442_01715 1ec6c8fb4c9888b1522178338e8d4f7e 330 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 13 329 1.8E-146 T 14-10-2018 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria GO:0015888|GO:0030288|GO:0030975 DA442_01715 1ec6c8fb4c9888b1522178338e8d4f7e 330 Pfam PF13343 Bacterial extracellular solute-binding protein 76 294 2.7E-22 T 14-10-2018 DA442_01715 1ec6c8fb4c9888b1522178338e8d4f7e 330 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 21 324 1.4E-144 T 14-10-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030975 DA442_01715 1ec6c8fb4c9888b1522178338e8d4f7e 330 SUPERFAMILY SSF53850 24 325 2.88E-69 T 14-10-2018 DA442_01715 1ec6c8fb4c9888b1522178338e8d4f7e 330 Gene3D G3DSA:3.40.190.10 26 300 3.2E-118 T 14-10-2018 DA442_01715 1ec6c8fb4c9888b1522178338e8d4f7e 330 Gene3D G3DSA:3.40.190.10 126 325 3.2E-118 T 14-10-2018 DA442_20430 f3312cd2baab37ef1e3891f6aa09198a 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 1.5E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DA442_20430 f3312cd2baab37ef1e3891f6aa09198a 199 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 198 97.432 T 14-10-2018 IPR017757 Transcriptional repressor BetI DA442_20430 f3312cd2baab37ef1e3891f6aa09198a 199 Gene3D G3DSA:1.10.357.10 5 196 7.8E-45 T 14-10-2018 DA442_20430 f3312cd2baab37ef1e3891f6aa09198a 199 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 85 192 7.0E-32 T 14-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal DA442_20430 f3312cd2baab37ef1e3891f6aa09198a 199 SUPERFAMILY SSF46689 4 76 2.98E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_20430 f3312cd2baab37ef1e3891f6aa09198a 199 SUPERFAMILY SSF48498 87 192 3.56E-16 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DA442_20430 f3312cd2baab37ef1e3891f6aa09198a 199 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 2 192 1.7E-75 T 14-10-2018 IPR017757 Transcriptional repressor BetI DA442_20430 f3312cd2baab37ef1e3891f6aa09198a 199 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DA442_04660 5f9d24d9c0016e173eb81a6047a0f373 122 Gene3D G3DSA:3.10.129.10 2 122 1.2E-33 T 14-10-2018 DA442_04660 5f9d24d9c0016e173eb81a6047a0f373 122 SUPERFAMILY SSF54637 12 108 6.53E-16 T 14-10-2018 IPR029069 HotDog domain superfamily DA442_04660 5f9d24d9c0016e173eb81a6047a0f373 122 PIRSF PIRSF030962 1 122 2.7E-49 T 14-10-2018 IPR016962 Dehydrase, ECs4332, predicted KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DA442_08605 f9251740aeed087ca19a374cf474d118 634 Gene3D G3DSA:3.40.50.12780 42 503 2.1E-102 T 14-10-2018 DA442_08605 f9251740aeed087ca19a374cf474d118 634 SUPERFAMILY SSF56801 8 626 7.72E-155 T 14-10-2018 DA442_08605 f9251740aeed087ca19a374cf474d118 634 Pfam PF00501 AMP-binding enzyme 73 510 3.0E-83 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DA442_08605 f9251740aeed087ca19a374cf474d118 634 ProSitePatterns PS00455 Putative AMP-binding domain signature. 246 257 - T 14-10-2018 IPR020845 AMP-binding, conserved site DA442_08605 f9251740aeed087ca19a374cf474d118 634 Pfam PF13193 AMP-binding enzyme C-terminal domain 519 598 3.3E-25 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain DA442_08605 f9251740aeed087ca19a374cf474d118 634 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 13 65 1.3E-11 T 14-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 DA442_08605 f9251740aeed087ca19a374cf474d118 634 Gene3D G3DSA:3.30.300.30 506 633 2.0E-24 T 14-10-2018 DA442_14580 54c7548b912f44e018accf7c699ef4cf 192 Gene3D G3DSA:1.10.1740.10 1 121 9.3E-46 T 14-10-2018 DA442_14580 54c7548b912f44e018accf7c699ef4cf 192 Pfam PF08281 Sigma-70, region 4 134 181 4.2E-18 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DA442_14580 54c7548b912f44e018accf7c699ef4cf 192 Gene3D G3DSA:1.10.10.10 122 192 2.4E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_14580 54c7548b912f44e018accf7c699ef4cf 192 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 2 190 3.0E-103 T 14-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DA442_14580 54c7548b912f44e018accf7c699ef4cf 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 185 6.6E-33 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DA442_14580 54c7548b912f44e018accf7c699ef4cf 192 Pfam PF04542 Sigma-70 region 2 25 92 3.3E-18 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DA442_14580 54c7548b912f44e018accf7c699ef4cf 192 SUPERFAMILY SSF88659 124 184 1.63E-17 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DA442_14580 54c7548b912f44e018accf7c699ef4cf 192 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 47 78 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DA442_14580 54c7548b912f44e018accf7c699ef4cf 192 SUPERFAMILY SSF88946 2 107 1.51E-32 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DA442_05120 f822e197b4c22685149bf50f7de17c9c 235 Pfam PF00005 ABC transporter 24 172 3.1E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_05120 f822e197b4c22685149bf50f7de17c9c 235 SUPERFAMILY SSF52540 4 225 2.21E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_05120 f822e197b4c22685149bf50f7de17c9c 235 SMART SM00382 33 221 2.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_05120 f822e197b4c22685149bf50f7de17c9c 235 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_05120 f822e197b4c22685149bf50f7de17c9c 235 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 4 223 5.9E-112 T 14-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 DA442_05120 f822e197b4c22685149bf50f7de17c9c 235 Gene3D G3DSA:3.40.50.300 1 233 3.8E-66 T 14-10-2018 DA442_17290 e1c859ba7a97d853484b42069f2ea61b 185 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 4 185 3.6E-39 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 DA442_17290 e1c859ba7a97d853484b42069f2ea61b 185 SUPERFAMILY SSF55821 2 182 2.44E-58 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DA442_17290 e1c859ba7a97d853484b42069f2ea61b 185 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 1 183 40.995 T 14-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 DA442_17290 e1c859ba7a97d853484b42069f2ea61b 185 Pfam PF01300 Telomere recombination 10 185 7.3E-50 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 DA442_17290 e1c859ba7a97d853484b42069f2ea61b 185 Gene3D G3DSA:3.90.870.10 1 183 6.5E-63 T 14-10-2018 DA442_15980 6075e12a42d6028843f8037038181d67 571 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 169 389 2.4E-49 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DA442_15980 6075e12a42d6028843f8037038181d67 571 Gene3D G3DSA:3.10.350.10 520 571 1.0E-15 T 14-10-2018 IPR036779 LysM domain superfamily DA442_15980 6075e12a42d6028843f8037038181d67 571 Gene3D G3DSA:3.10.350.10 401 463 4.4E-13 T 14-10-2018 IPR036779 LysM domain superfamily DA442_15980 6075e12a42d6028843f8037038181d67 571 Gene3D G3DSA:2.60.40.3500 23 137 2.5E-24 T 14-10-2018 DA442_15980 6075e12a42d6028843f8037038181d67 571 Pfam PF01476 LysM domain 411 453 1.7E-12 T 14-10-2018 IPR018392 LysM domain DA442_15980 6075e12a42d6028843f8037038181d67 571 Pfam PF01476 LysM domain 474 516 6.1E-12 T 14-10-2018 IPR018392 LysM domain DA442_15980 6075e12a42d6028843f8037038181d67 571 Pfam PF01476 LysM domain 527 569 9.1E-13 T 14-10-2018 IPR018392 LysM domain DA442_15980 6075e12a42d6028843f8037038181d67 571 SUPERFAMILY SSF54106 472 516 7.59E-10 T 14-10-2018 DA442_15980 6075e12a42d6028843f8037038181d67 571 SMART SM00257 526 569 1.5E-12 T 14-10-2018 IPR018392 LysM domain DA442_15980 6075e12a42d6028843f8037038181d67 571 SMART SM00257 473 516 1.7E-14 T 14-10-2018 IPR018392 LysM domain DA442_15980 6075e12a42d6028843f8037038181d67 571 SMART SM00257 410 453 3.6E-14 T 14-10-2018 IPR018392 LysM domain DA442_15980 6075e12a42d6028843f8037038181d67 571 SMART SM00646 230 389 1.2E-61 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DA442_15980 6075e12a42d6028843f8037038181d67 571 Pfam PF11741 AMIN domain 34 135 8.4E-16 T 14-10-2018 IPR021731 AMIN domain DA442_15980 6075e12a42d6028843f8037038181d67 571 SUPERFAMILY SSF54106 409 453 1.14E-9 T 14-10-2018 DA442_15980 6075e12a42d6028843f8037038181d67 571 Gene3D G3DSA:3.10.350.10 469 519 1.5E-14 T 14-10-2018 IPR036779 LysM domain superfamily DA442_15980 6075e12a42d6028843f8037038181d67 571 SUPERFAMILY SSF54106 526 569 6.15E-10 T 14-10-2018 DA442_15980 6075e12a42d6028843f8037038181d67 571 Gene3D G3DSA:3.40.630.40 155 398 2.7E-69 T 14-10-2018 DA442_15980 6075e12a42d6028843f8037038181d67 571 SUPERFAMILY SSF53187 167 392 8.48E-53 T 14-10-2018 DA442_11380 ce423144d286918801206531909589aa 556 SUPERFAMILY SSF50249 347 438 6.34E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_11380 ce423144d286918801206531909589aa 556 Gene3D G3DSA:2.40.50.140 187 268 4.0E-28 T 14-10-2018 DA442_11380 ce423144d286918801206531909589aa 556 SUPERFAMILY SSF50249 189 277 4.18E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_11380 ce423144d286918801206531909589aa 556 SMART SM00316 190 260 6.0E-28 T 14-10-2018 IPR022967 RNA-binding domain, S1 DA442_11380 ce423144d286918801206531909589aa 556 SMART SM00316 275 347 1.8E-27 T 14-10-2018 IPR022967 RNA-binding domain, S1 DA442_11380 ce423144d286918801206531909589aa 556 SMART SM00316 103 171 1.2E-7 T 14-10-2018 IPR022967 RNA-binding domain, S1 DA442_11380 ce423144d286918801206531909589aa 556 SMART SM00316 362 434 1.9E-21 T 14-10-2018 IPR022967 RNA-binding domain, S1 DA442_11380 ce423144d286918801206531909589aa 556 SMART SM00316 449 520 1.5E-19 T 14-10-2018 IPR022967 RNA-binding domain, S1 DA442_11380 ce423144d286918801206531909589aa 556 SMART SM00316 19 87 0.0012 T 14-10-2018 IPR022967 RNA-binding domain, S1 DA442_11380 ce423144d286918801206531909589aa 556 SUPERFAMILY SSF50249 255 360 2.29E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_11380 ce423144d286918801206531909589aa 556 Gene3D G3DSA:2.40.50.140 269 357 1.5E-31 T 14-10-2018 DA442_11380 ce423144d286918801206531909589aa 556 Gene3D G3DSA:2.40.50.140 358 443 1.9E-23 T 14-10-2018 DA442_11380 ce423144d286918801206531909589aa 556 Gene3D G3DSA:2.40.50.140 6 98 1.0E-16 T 14-10-2018 DA442_11380 ce423144d286918801206531909589aa 556 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 8.3E-231 T 14-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 DA442_11380 ce423144d286918801206531909589aa 556 SUPERFAMILY SSF50249 88 174 2.61E-13 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_11380 ce423144d286918801206531909589aa 556 SUPERFAMILY SSF50249 4 112 1.89E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_11380 ce423144d286918801206531909589aa 556 PRINTS PR00681 Ribosomal protein S1 signature 155 175 3.4E-97 T 14-10-2018 DA442_11380 ce423144d286918801206531909589aa 556 PRINTS PR00681 Ribosomal protein S1 signature 108 124 3.4E-97 T 14-10-2018 DA442_11380 ce423144d286918801206531909589aa 556 PRINTS PR00681 Ribosomal protein S1 signature 21 39 3.4E-97 T 14-10-2018 DA442_11380 ce423144d286918801206531909589aa 556 PRINTS PR00681 Ribosomal protein S1 signature 126 143 3.4E-97 T 14-10-2018 DA442_11380 ce423144d286918801206531909589aa 556 PRINTS PR00681 Ribosomal protein S1 signature 330 348 3.4E-97 T 14-10-2018 DA442_11380 ce423144d286918801206531909589aa 556 PRINTS PR00681 Ribosomal protein S1 signature 212 233 3.4E-97 T 14-10-2018 DA442_11380 ce423144d286918801206531909589aa 556 PRINTS PR00681 Ribosomal protein S1 signature 290 309 3.4E-97 T 14-10-2018 DA442_11380 ce423144d286918801206531909589aa 556 PRINTS PR00681 Ribosomal protein S1 signature 39 53 3.4E-97 T 14-10-2018 DA442_11380 ce423144d286918801206531909589aa 556 PRINTS PR00681 Ribosomal protein S1 signature 84 103 3.4E-97 T 14-10-2018 DA442_11380 ce423144d286918801206531909589aa 556 Pfam PF00575 S1 RNA binding domain 275 347 2.6E-21 T 14-10-2018 IPR003029 S1 domain GO:0003676 DA442_11380 ce423144d286918801206531909589aa 556 Pfam PF00575 S1 RNA binding domain 362 434 1.1E-20 T 14-10-2018 IPR003029 S1 domain GO:0003676 DA442_11380 ce423144d286918801206531909589aa 556 Pfam PF00575 S1 RNA binding domain 18 86 1.5E-6 T 14-10-2018 IPR003029 S1 domain GO:0003676 DA442_11380 ce423144d286918801206531909589aa 556 Pfam PF00575 S1 RNA binding domain 449 520 8.9E-15 T 14-10-2018 IPR003029 S1 domain GO:0003676 DA442_11380 ce423144d286918801206531909589aa 556 Pfam PF00575 S1 RNA binding domain 189 260 1.7E-21 T 14-10-2018 IPR003029 S1 domain GO:0003676 DA442_11380 ce423144d286918801206531909589aa 556 Pfam PF00575 S1 RNA binding domain 103 171 5.9E-8 T 14-10-2018 IPR003029 S1 domain GO:0003676 DA442_11380 ce423144d286918801206531909589aa 556 SUPERFAMILY SSF50249 429 540 2.61E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_11380 ce423144d286918801206531909589aa 556 PIRSF PIRSF002111 1 534 5.2E-218 T 14-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 DA442_11380 ce423144d286918801206531909589aa 556 Gene3D G3DSA:2.40.50.140 99 178 1.5E-5 T 14-10-2018 DA442_11380 ce423144d286918801206531909589aa 556 Gene3D G3DSA:2.40.50.140 444 528 3.1E-19 T 14-10-2018 DA442_21555 364bdcb20f2c22c8f3406b835e63545a 280 SUPERFAMILY SSF46689 181 227 3.76E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_21555 364bdcb20f2c22c8f3406b835e63545a 280 Gene3D G3DSA:1.10.10.60 228 280 1.6E-16 T 14-10-2018 DA442_21555 364bdcb20f2c22c8f3406b835e63545a 280 Pfam PF12833 Helix-turn-helix domain 200 278 5.9E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_21555 364bdcb20f2c22c8f3406b835e63545a 280 SUPERFAMILY SSF51182 26 78 6.02E-5 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DA442_21555 364bdcb20f2c22c8f3406b835e63545a 280 SUPERFAMILY SSF46689 230 279 6.72E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_21555 364bdcb20f2c22c8f3406b835e63545a 280 Gene3D G3DSA:1.10.10.60 177 227 4.9E-13 T 14-10-2018 DA442_21555 364bdcb20f2c22c8f3406b835e63545a 280 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 231 273 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DA442_21555 364bdcb20f2c22c8f3406b835e63545a 280 SMART SM00342 194 277 4.0E-30 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_21555 364bdcb20f2c22c8f3406b835e63545a 280 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 261 277 5.5E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DA442_21555 364bdcb20f2c22c8f3406b835e63545a 280 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 246 261 5.5E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DA442_08170 932ab9c636dc1ee2c0e3e508b74ff78b 427 SUPERFAMILY SSF111352 38 405 4.84E-95 T 14-10-2018 DA442_08170 932ab9c636dc1ee2c0e3e508b74ff78b 427 Pfam PF00909 Ammonium Transporter Family 44 420 2.5E-86 T 14-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 DA442_08170 932ab9c636dc1ee2c0e3e508b74ff78b 427 Gene3D G3DSA:1.10.3430.10 17 427 1.6E-101 T 14-10-2018 IPR029020 Ammonium/urea transporter DA442_03140 9230a00b20a729cb4e7dca224f3636b0 375 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 5 353 71.98 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 DA442_03140 9230a00b20a729cb4e7dca224f3636b0 375 Gene3D G3DSA:3.20.20.70 68 338 2.5E-112 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_03140 9230a00b20a729cb4e7dca224f3636b0 375 SUPERFAMILY SSF102114 103 312 3.27E-13 T 14-10-2018 DA442_03140 9230a00b20a729cb4e7dca224f3636b0 375 PIRSF PIRSF006004 3 366 9.0E-145 T 14-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 DA442_03140 9230a00b20a729cb4e7dca224f3636b0 375 Pfam PF04055 Radical SAM superfamily 109 283 1.7E-14 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DA442_03140 9230a00b20a729cb4e7dca224f3636b0 375 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 359 2.8E-161 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 DA442_03140 9230a00b20a729cb4e7dca224f3636b0 375 Gene3D G3DSA:1.10.150.530 1 67 3.5E-26 T 14-10-2018 DA442_09010 9264773cf2b5339b5b957ac055dcbe16 395 SUPERFAMILY SSF52540 43 271 1.45E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_09010 9264773cf2b5339b5b957ac055dcbe16 395 SUPERFAMILY SSF54631 274 392 2.49E-15 T 14-10-2018 DA442_09010 9264773cf2b5339b5b957ac055dcbe16 395 SMART SM00382 53 242 7.5E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_09010 9264773cf2b5339b5b957ac055dcbe16 395 Pfam PF00005 ABC transporter 45 192 5.7E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_09010 9264773cf2b5339b5b957ac055dcbe16 395 Gene3D G3DSA:3.40.50.300 34 295 6.2E-81 T 14-10-2018 DA442_09010 9264773cf2b5339b5b957ac055dcbe16 395 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 36 393 1.2E-150 T 14-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 DA442_09010 9264773cf2b5339b5b957ac055dcbe16 395 Gene3D G3DSA:3.10.580.10 296 394 1.5E-10 T 14-10-2018 DA442_09010 9264773cf2b5339b5b957ac055dcbe16 395 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_09010 9264773cf2b5339b5b957ac055dcbe16 395 Pfam PF00571 CBS domain 348 393 3.7E-5 T 14-10-2018 IPR000644 CBS domain DA442_18190 c483f57d77ce4154b77e9044413cb1a2 360 Gene3D G3DSA:1.10.10.60 309 360 1.8E-12 T 14-10-2018 DA442_18190 c483f57d77ce4154b77e9044413cb1a2 360 SUPERFAMILY SSF46689 311 359 2.47E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_18190 c483f57d77ce4154b77e9044413cb1a2 360 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 312 354 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DA442_18190 c483f57d77ce4154b77e9044413cb1a2 360 SUPERFAMILY SSF46689 258 309 2.87E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_18190 c483f57d77ce4154b77e9044413cb1a2 360 Pfam PF12833 Helix-turn-helix domain 281 359 1.0E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_18190 c483f57d77ce4154b77e9044413cb1a2 360 Gene3D G3DSA:1.10.10.60 251 308 1.5E-14 T 14-10-2018 DA442_18190 c483f57d77ce4154b77e9044413cb1a2 360 SMART SM00342 275 358 4.5E-26 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_00445 4cd7cb79fd64b10279bf7dd88f0db453 545 Pfam PF00782 Dual specificity phosphatase, catalytic domain 107 229 2.5E-17 T 14-10-2018 IPR000340 Dual specificity phosphatase, catalytic domain GO:0008138|GO:0016311 DA442_00445 4cd7cb79fd64b10279bf7dd88f0db453 545 Gene3D G3DSA:3.90.190.10 88 234 1.7E-26 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like DA442_00445 4cd7cb79fd64b10279bf7dd88f0db453 545 SMART SM00195 90 232 2.7E-14 T 14-10-2018 IPR020422 Dual specificity protein phosphatase domain GO:0006470|GO:0008138 DA442_00445 4cd7cb79fd64b10279bf7dd88f0db453 545 Pfam PF00781 Diacylglycerol kinase catalytic domain 242 365 1.0E-27 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 DA442_00445 4cd7cb79fd64b10279bf7dd88f0db453 545 SUPERFAMILY SSF111331 241 544 1.19E-54 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily DA442_00445 4cd7cb79fd64b10279bf7dd88f0db453 545 SUPERFAMILY SSF52799 84 227 1.9E-27 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like DA442_00445 4cd7cb79fd64b10279bf7dd88f0db453 545 SMART SM00046 240 363 6.8E-5 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 DA442_00445 4cd7cb79fd64b10279bf7dd88f0db453 545 Gene3D G3DSA:3.40.50.10330 237 365 3.9E-28 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 DA442_00445 4cd7cb79fd64b10279bf7dd88f0db453 545 Gene3D G3DSA:2.60.200.40 366 537 1.1E-25 T 14-10-2018 DA442_00445 4cd7cb79fd64b10279bf7dd88f0db453 545 SMART SM00404 135 231 6.9E-4 T 14-10-2018 IPR003595 Protein-tyrosine phosphatase, catalytic DA442_02810 f741372e7414174b52a5ed910c75acce 122 PIRSF PIRSF028141 1 120 6.1E-35 T 14-10-2018 IPR027021 Cyclic di-GMP binding protein, PA4608 type DA442_02810 f741372e7414174b52a5ed910c75acce 122 Gene3D G3DSA:2.40.10.220 1 120 1.2E-27 T 14-10-2018 DA442_02810 f741372e7414174b52a5ed910c75acce 122 Pfam PF07238 PilZ domain 3 100 3.2E-13 T 14-10-2018 IPR009875 PilZ domain GO:0035438 DA442_02810 f741372e7414174b52a5ed910c75acce 122 SUPERFAMILY SSF141371 1 120 8.24E-29 T 14-10-2018 DA442_06775 a75fce151ace288ed9f5572dd8cd0b4a 348 Gene3D G3DSA:3.40.50.720 31 348 1.1E-71 T 14-10-2018 DA442_06775 a75fce151ace288ed9f5572dd8cd0b4a 348 Pfam PF01370 NAD dependent epimerase/dehydratase family 35 277 8.2E-39 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DA442_06775 a75fce151ace288ed9f5572dd8cd0b4a 348 SUPERFAMILY SSF51735 27 347 2.41E-62 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_06210 6973f3e1692c8e67a8442ae8e2cb5a76 92 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 1 92 3.0E-38 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 DA442_06210 6973f3e1692c8e67a8442ae8e2cb5a76 92 SUPERFAMILY SSF50715 1 92 4.19E-28 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DA442_06210 6973f3e1692c8e67a8442ae8e2cb5a76 92 Gene3D G3DSA:2.40.240.10 1 92 7.2E-34 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DA442_06210 6973f3e1692c8e67a8442ae8e2cb5a76 92 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 1 92 26.525 T 14-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 DA442_06210 6973f3e1692c8e67a8442ae8e2cb5a76 92 Pfam PF01386 Ribosomal L25p family 4 89 4.3E-22 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 DA442_03210 0fd753e53ace886380fac03620c6e0d2 567 SUPERFAMILY SSF51055 430 479 1.24E-16 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 DA442_03210 0fd753e53ace886380fac03620c6e0d2 567 Gene3D G3DSA:1.10.530.10 105 346 1.0E-76 T 14-10-2018 DA442_03210 0fd753e53ace886380fac03620c6e0d2 567 Gene3D G3DSA:2.10.10.20 434 480 2.8E-15 T 14-10-2018 DA442_03210 0fd753e53ace886380fac03620c6e0d2 567 SUPERFAMILY SSF53955 87 350 2.81E-53 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily DA442_03210 0fd753e53ace886380fac03620c6e0d2 567 Pfam PF00182 Chitinase class I 106 325 4.9E-30 T 14-10-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 DA442_03210 0fd753e53ace886380fac03620c6e0d2 567 SMART SM00495 436 478 1.2E-17 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 DA442_03210 0fd753e53ace886380fac03620c6e0d2 567 SMART SM00495 519 564 1.5 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 DA442_03210 0fd753e53ace886380fac03620c6e0d2 567 Gene3D G3DSA:3.30.20.10 178 248 1.0E-76 T 14-10-2018 DA442_25805 a2783ccd31132c17b4822a5ce8c0651a 204 Gene3D G3DSA:3.40.30.10 109 185 8.5E-19 T 14-10-2018 DA442_25805 a2783ccd31132c17b4822a5ce8c0651a 204 ProSitePatterns PS00195 Glutaredoxin active site. 110 126 - T 14-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 DA442_25805 a2783ccd31132c17b4822a5ce8c0651a 204 SUPERFAMILY SSF52833 109 189 1.43E-17 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_25805 a2783ccd31132c17b4822a5ce8c0651a 204 Pfam PF00462 Glutaredoxin 109 174 4.0E-16 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 DA442_25805 a2783ccd31132c17b4822a5ce8c0651a 204 PRINTS PR00160 Glutaredoxin signature 157 170 3.7E-7 T 14-10-2018 IPR014025 Glutaredoxin subgroup DA442_25805 a2783ccd31132c17b4822a5ce8c0651a 204 PRINTS PR00160 Glutaredoxin signature 108 126 3.7E-7 T 14-10-2018 IPR014025 Glutaredoxin subgroup DA442_25805 a2783ccd31132c17b4822a5ce8c0651a 204 PRINTS PR00160 Glutaredoxin signature 171 184 3.7E-7 T 14-10-2018 IPR014025 Glutaredoxin subgroup DA442_14060 496cba5c43372637dd4f3b93b6830be3 639 Gene3D G3DSA:3.30.379.10 132 258 3.9E-20 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 DA442_14060 496cba5c43372637dd4f3b93b6830be3 639 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 139 256 1.0E-13 T 14-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal DA442_14060 496cba5c43372637dd4f3b93b6830be3 639 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 260 607 7.6E-120 T 14-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 DA442_14060 496cba5c43372637dd4f3b93b6830be3 639 Gene3D G3DSA:3.20.20.80 259 636 8.2E-136 T 14-10-2018 DA442_14060 496cba5c43372637dd4f3b93b6830be3 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 283 304 7.7E-50 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 DA442_14060 496cba5c43372637dd4f3b93b6830be3 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 402 420 7.7E-50 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 DA442_14060 496cba5c43372637dd4f3b93b6830be3 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 217 237 7.7E-50 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 DA442_14060 496cba5c43372637dd4f3b93b6830be3 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 254 271 7.7E-50 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 DA442_14060 496cba5c43372637dd4f3b93b6830be3 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 353 370 7.7E-50 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 DA442_14060 496cba5c43372637dd4f3b93b6830be3 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 424 437 7.7E-50 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 DA442_14060 496cba5c43372637dd4f3b93b6830be3 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 589 606 7.7E-50 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 DA442_14060 496cba5c43372637dd4f3b93b6830be3 639 PRINTS PR00738 Glycosyl hydrolase family 20 signature 571 587 7.7E-50 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 DA442_14060 496cba5c43372637dd4f3b93b6830be3 639 SUPERFAMILY SSF55545 125 259 6.73E-25 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 DA442_14060 496cba5c43372637dd4f3b93b6830be3 639 PIRSF PIRSF001093 111 206 140.0 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 DA442_14060 496cba5c43372637dd4f3b93b6830be3 639 PIRSF PIRSF001093 198 638 4.5E-95 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 DA442_14060 496cba5c43372637dd4f3b93b6830be3 639 SUPERFAMILY SSF51445 260 620 5.48E-129 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DA442_10850 f1965d24d7bf473d440dabc6a713fe63 228 Pfam PF13247 4Fe-4S dicluster domain 88 186 4.2E-26 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DA442_10850 f1965d24d7bf473d440dabc6a713fe63 228 SUPERFAMILY SSF54862 39 221 1.36E-64 T 14-10-2018 DA442_10850 f1965d24d7bf473d440dabc6a713fe63 228 TIGRFAM TIGR03149 cyt_nit_nrfC: cytochrome c nitrite reductase, Fe-S protein 2 227 6.9E-132 T 14-10-2018 IPR017567 Cytochrome c nitrite reductase, Fe-S protein DA442_10850 f1965d24d7bf473d440dabc6a713fe63 228 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 130 141 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DA442_10850 f1965d24d7bf473d440dabc6a713fe63 228 Pfam PF12800 4Fe-4S binding domain 49 61 0.89 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DA442_10850 f1965d24d7bf473d440dabc6a713fe63 228 Gene3D G3DSA:3.30.70.20 33 227 5.8E-60 T 14-10-2018 DA442_14760 515170003381595f687df469bea2cfd2 141 SMART SM00732 3 104 3.9E-34 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 DA442_14760 515170003381595f687df469bea2cfd2 141 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 6 136 1.6E-48 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 DA442_14760 515170003381595f687df469bea2cfd2 141 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 3 139 24.052 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 DA442_14760 515170003381595f687df469bea2cfd2 141 Gene3D G3DSA:3.30.420.140 1 138 6.1E-39 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 DA442_14760 515170003381595f687df469bea2cfd2 141 Pfam PF03652 Holliday junction resolvase 4 136 1.6E-35 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 DA442_14760 515170003381595f687df469bea2cfd2 141 SUPERFAMILY SSF53098 3 136 1.24E-36 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DA442_14350 19ad7d321869891c54ee6c4412dabac9 376 PIRSF PIRSF015658 1 376 3.0E-178 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 DA442_14350 19ad7d321869891c54ee6c4412dabac9 376 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 370 1.0E-168 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 DA442_14350 19ad7d321869891c54ee6c4412dabac9 376 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 374 1.6E-157 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 DA442_21750 6def68d40ba296aef7d6e0d5091e30cb 547 SUPERFAMILY SSF58104 239 547 2.22E-69 T 14-10-2018 DA442_21750 6def68d40ba296aef7d6e0d5091e30cb 547 Pfam PF00672 HAMP domain 219 267 6.8E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_21750 6def68d40ba296aef7d6e0d5091e30cb 547 SMART SM00283 285 546 8.8E-66 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_21750 6def68d40ba296aef7d6e0d5091e30cb 547 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 348 512 8.0E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_21750 6def68d40ba296aef7d6e0d5091e30cb 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 412 441 4.8E-7 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DA442_21750 6def68d40ba296aef7d6e0d5091e30cb 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 299 328 4.8E-7 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DA442_21750 6def68d40ba296aef7d6e0d5091e30cb 547 SMART SM00304 218 270 2.6E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_21750 6def68d40ba296aef7d6e0d5091e30cb 547 Gene3D G3DSA:1.10.287.950 217 547 2.4E-69 T 14-10-2018 DA442_23965 138faa069316cf52cb1d7a56f4b7e0f7 458 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 350 456 6.3E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_23965 138faa069316cf52cb1d7a56f4b7e0f7 458 Gene3D G3DSA:1.10.287.130 183 300 1.0E-24 T 14-10-2018 DA442_23965 138faa069316cf52cb1d7a56f4b7e0f7 458 Pfam PF16750 Sensor domain of 2-component histidine kinase 50 150 9.1E-31 T 14-10-2018 IPR031930 2-component histidine kinase, sensor domain DA442_23965 138faa069316cf52cb1d7a56f4b7e0f7 458 SUPERFAMILY SSF55874 289 456 3.01E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_23965 138faa069316cf52cb1d7a56f4b7e0f7 458 SMART SM00387 344 458 4.2E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_23965 138faa069316cf52cb1d7a56f4b7e0f7 458 SUPERFAMILY SSF47384 218 298 2.35E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DA442_23965 138faa069316cf52cb1d7a56f4b7e0f7 458 Gene3D G3DSA:3.30.565.10 314 458 3.5E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_23965 138faa069316cf52cb1d7a56f4b7e0f7 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 413 2.1E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_23965 138faa069316cf52cb1d7a56f4b7e0f7 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 399 2.1E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_23965 138faa069316cf52cb1d7a56f4b7e0f7 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 438 2.1E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_23965 138faa069316cf52cb1d7a56f4b7e0f7 458 SUPERFAMILY SSF158472 179 231 6.28E-6 T 14-10-2018 DA442_23965 138faa069316cf52cb1d7a56f4b7e0f7 458 SMART SM00388 235 299 2.9E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_23965 138faa069316cf52cb1d7a56f4b7e0f7 458 Pfam PF00672 HAMP domain 179 230 1.6E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_23965 138faa069316cf52cb1d7a56f4b7e0f7 458 SMART SM00304 179 234 1.4E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_23965 138faa069316cf52cb1d7a56f4b7e0f7 458 Gene3D G3DSA:3.30.450.170 41 151 1.1E-8 T 14-10-2018 IPR038428 2-component histidine kinase, sensor domain superfamily DA442_23965 138faa069316cf52cb1d7a56f4b7e0f7 458 Pfam PF00512 His Kinase A (phospho-acceptor) domain 236 298 1.6E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_02725 b0c300ef76fdbdaf70eb512676a73c6a 520 Pfam PF03023 MviN-like protein 30 483 2.7E-144 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DA442_02725 b0c300ef76fdbdaf70eb512676a73c6a 520 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 5 511 4.2E-137 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DA442_02725 b0c300ef76fdbdaf70eb512676a73c6a 520 PRINTS PR01806 Virulence factor MviN signature 166 187 1.9E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DA442_02725 b0c300ef76fdbdaf70eb512676a73c6a 520 PRINTS PR01806 Virulence factor MviN signature 54 70 1.9E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DA442_02725 b0c300ef76fdbdaf70eb512676a73c6a 520 PRINTS PR01806 Virulence factor MviN signature 35 54 1.9E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DA442_02725 b0c300ef76fdbdaf70eb512676a73c6a 520 PRINTS PR01806 Virulence factor MviN signature 142 166 1.9E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DA442_02725 b0c300ef76fdbdaf70eb512676a73c6a 520 PRINTS PR01806 Virulence factor MviN signature 268 294 1.9E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DA442_02725 b0c300ef76fdbdaf70eb512676a73c6a 520 PRINTS PR01806 Virulence factor MviN signature 418 435 1.9E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DA442_02725 b0c300ef76fdbdaf70eb512676a73c6a 520 PRINTS PR01806 Virulence factor MviN signature 366 385 1.9E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DA442_02725 b0c300ef76fdbdaf70eb512676a73c6a 520 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 5 476 19.808 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DA442_02725 b0c300ef76fdbdaf70eb512676a73c6a 520 PIRSF PIRSF002869 1 517 6.9E-148 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ DA442_08965 2135d143d917c82584605efaa95c0dda 383 Pfam PF12698 ABC-2 family transporter protein 22 367 1.9E-40 T 14-10-2018 DA442_22610 3a134ab3c19b36bc5d0d7e9aaa36fad8 538 Gene3D G3DSA:2.60.120.260 22 177 9.3E-15 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily DA442_22610 3a134ab3c19b36bc5d0d7e9aaa36fad8 538 SUPERFAMILY SSF49785 22 164 5.61E-25 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily DA442_22610 3a134ab3c19b36bc5d0d7e9aaa36fad8 538 SUPERFAMILY SSF54060 291 530 7.77E-52 T 14-10-2018 DA442_22610 3a134ab3c19b36bc5d0d7e9aaa36fad8 538 Pfam PF02018 Carbohydrate binding domain 22 136 4.2E-8 T 14-10-2018 IPR003305 Carbohydrate-binding, CenC-like GO:0016798 DA442_22610 3a134ab3c19b36bc5d0d7e9aaa36fad8 538 Pfam PF04231 Endonuclease I 294 530 3.0E-104 T 14-10-2018 IPR007346 Endonuclease I GO:0004518 DA442_24175 0687c3fc844b250bcf28af5f9999c9e6 131 Pfam PF00031 Cystatin domain 53 104 3.3E-6 T 14-10-2018 IPR000010 Cystatin domain GO:0004869 DA442_24175 0687c3fc844b250bcf28af5f9999c9e6 131 Gene3D G3DSA:3.10.450.10 46 109 2.0E-5 T 14-10-2018 DA442_24175 0687c3fc844b250bcf28af5f9999c9e6 131 SUPERFAMILY SSF54403 48 116 4.86E-12 T 14-10-2018 DA442_14505 2ed4f879c3d44cf7b5efce869c7cbc62 739 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 64 737 2.9E-182 T 14-10-2018 IPR004811 RelA/SpoT family GO:0015969 DA442_14505 2ed4f879c3d44cf7b5efce869c7cbc62 739 SUPERFAMILY SSF109604 50 205 5.96E-42 T 14-10-2018 DA442_14505 2ed4f879c3d44cf7b5efce869c7cbc62 739 SMART SM00954 250 360 8.3E-64 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 DA442_14505 2ed4f879c3d44cf7b5efce869c7cbc62 739 Gene3D G3DSA:3.30.70.260 660 739 8.1E-16 T 14-10-2018 DA442_14505 2ed4f879c3d44cf7b5efce869c7cbc62 739 Pfam PF02824 TGS domain 402 461 1.6E-20 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 DA442_14505 2ed4f879c3d44cf7b5efce869c7cbc62 739 Gene3D G3DSA:1.10.3210.10 49 205 4.5E-35 T 14-10-2018 DA442_14505 2ed4f879c3d44cf7b5efce869c7cbc62 739 Pfam PF04607 Region found in RelA / SpoT proteins 250 359 2.7E-36 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 DA442_14505 2ed4f879c3d44cf7b5efce869c7cbc62 739 SUPERFAMILY SSF55021 662 737 3.57E-10 T 14-10-2018 DA442_14505 2ed4f879c3d44cf7b5efce869c7cbc62 739 Gene3D G3DSA:3.30.460.10 208 340 4.0E-49 T 14-10-2018 DA442_14505 2ed4f879c3d44cf7b5efce869c7cbc62 739 Pfam PF13328 HD domain 52 190 1.9E-35 T 14-10-2018 IPR003607 HD/PDEase domain DA442_14505 2ed4f879c3d44cf7b5efce869c7cbc62 739 Gene3D G3DSA:3.10.20.30 396 469 1.8E-30 T 14-10-2018 IPR012675 Beta-grasp domain superfamily DA442_14505 2ed4f879c3d44cf7b5efce869c7cbc62 739 SUPERFAMILY SSF81271 395 461 9.81E-21 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 DA442_14505 2ed4f879c3d44cf7b5efce869c7cbc62 739 Pfam PF13291 ACT domain 661 737 2.8E-16 T 14-10-2018 IPR002912 ACT domain DA442_14505 2ed4f879c3d44cf7b5efce869c7cbc62 739 SUPERFAMILY SSF81301 195 406 2.45E-62 T 14-10-2018 DA442_04975 dae338a088ca89501ac63f4ffa180102 286 Gene3D G3DSA:3.10.129.90 2 286 2.0E-107 T 14-10-2018 DA442_04975 dae338a088ca89501ac63f4ffa180102 286 SUPERFAMILY SSF54637 116 283 5.93E-59 T 14-10-2018 IPR029069 HotDog domain superfamily DA442_04975 dae338a088ca89501ac63f4ffa180102 286 Pfam PF13622 Thioesterase-like superfamily 33 282 1.8E-61 T 14-10-2018 DA442_04975 dae338a088ca89501ac63f4ffa180102 286 SUPERFAMILY SSF54637 6 114 5.6E-40 T 14-10-2018 IPR029069 HotDog domain superfamily DA442_04975 dae338a088ca89501ac63f4ffa180102 286 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 4.6E-95 T 14-10-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 DA442_04885 22fc4a7f682892068bb0901cad1b7ff5 624 Pfam PF05977 Transmembrane secretion effector 64 288 1.6E-5 T 14-10-2018 IPR010290 Transmembrane secretion effector DA442_04885 22fc4a7f682892068bb0901cad1b7ff5 624 SMART SM00563 456 570 3.0E-36 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DA442_04885 22fc4a7f682892068bb0901cad1b7ff5 624 SUPERFAMILY SSF103473 13 424 5.1E-25 T 14-10-2018 IPR036259 MFS transporter superfamily DA442_04885 22fc4a7f682892068bb0901cad1b7ff5 624 SUPERFAMILY SSF69593 403 609 1.83E-30 T 14-10-2018 DA442_04885 22fc4a7f682892068bb0901cad1b7ff5 624 Gene3D G3DSA:1.20.1250.20 11 421 4.1E-26 T 14-10-2018 DA442_04885 22fc4a7f682892068bb0901cad1b7ff5 624 Pfam PF01553 Acyltransferase 442 567 4.2E-25 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DA442_15800 b3dd2d9a62014cc6d3b308f343ab759e 66 Pfam PF09526 Probable metal-binding protein (DUF2387) 4 52 5.5E-21 T 14-10-2018 IPR012658 Conserved hypothetical protein CHP02443 DA442_15800 b3dd2d9a62014cc6d3b308f343ab759e 66 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 2 60 4.4E-33 T 14-10-2018 IPR012658 Conserved hypothetical protein CHP02443 DA442_18235 2907a86b48e8936dc94a98696f0220f2 689 Pfam PF13361 UvrD-like helicase C-terminal domain 596 667 5.3E-17 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 DA442_18235 2907a86b48e8936dc94a98696f0220f2 689 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 166 8.2E-50 T 14-10-2018 IPR022161 DNA helicase IV, N-terminal domain DA442_18235 2907a86b48e8936dc94a98696f0220f2 689 Gene3D G3DSA:3.40.50.300 507 682 4.1E-29 T 14-10-2018 DA442_18235 2907a86b48e8936dc94a98696f0220f2 689 SUPERFAMILY SSF52540 198 678 1.77E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_18235 2907a86b48e8936dc94a98696f0220f2 689 Gene3D G3DSA:3.40.50.300 200 499 2.1E-49 T 14-10-2018 DA442_18235 2907a86b48e8936dc94a98696f0220f2 689 Pfam PF00580 UvrD/REP helicase N-terminal domain 201 498 1.6E-39 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 DA442_18235 2907a86b48e8936dc94a98696f0220f2 689 Gene3D G3DSA:1.10.10.160 300 416 2.1E-49 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily DA442_03550 d5a435937e46734dfc50eb77c35ac110 306 SUPERFAMILY SSF53850 92 296 1.57E-38 T 14-10-2018 DA442_03550 d5a435937e46734dfc50eb77c35ac110 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 2.8E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_03550 d5a435937e46734dfc50eb77c35ac110 306 SUPERFAMILY SSF46785 3 85 6.06E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_03550 d5a435937e46734dfc50eb77c35ac110 306 Gene3D G3DSA:1.10.10.10 7 95 2.0E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_03550 d5a435937e46734dfc50eb77c35ac110 306 Pfam PF03466 LysR substrate binding domain 91 291 2.7E-37 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_03550 d5a435937e46734dfc50eb77c35ac110 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.9E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_03550 d5a435937e46734dfc50eb77c35ac110 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.9E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_03550 d5a435937e46734dfc50eb77c35ac110 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.9E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_03550 d5a435937e46734dfc50eb77c35ac110 306 Gene3D G3DSA:3.40.190.10 103 288 4.0E-58 T 14-10-2018 DA442_03550 d5a435937e46734dfc50eb77c35ac110 306 Gene3D G3DSA:3.40.190.10 163 261 4.0E-58 T 14-10-2018 DA442_08985 b0876b1ccb5cc2750729fc667a3f7c12 421 Gene3D G3DSA:3.90.1150.10 5 405 3.8E-105 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DA442_08985 b0876b1ccb5cc2750729fc667a3f7c12 421 SUPERFAMILY SSF53383 7 410 2.74E-102 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_08985 b0876b1ccb5cc2750729fc667a3f7c12 421 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 2 413 3.8E-150 T 14-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 DA442_08985 b0876b1ccb5cc2750729fc667a3f7c12 421 PIRSF PIRSF000521 121 154 4.2 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DA442_08985 b0876b1ccb5cc2750729fc667a3f7c12 421 PIRSF PIRSF000521 174 412 6.2E-30 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DA442_08985 b0876b1ccb5cc2750729fc667a3f7c12 421 PIRSF PIRSF000521 2 127 3.8E-4 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DA442_08985 b0876b1ccb5cc2750729fc667a3f7c12 421 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 230 266 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DA442_08985 b0876b1ccb5cc2750729fc667a3f7c12 421 Pfam PF00202 Aminotransferase class-III 15 409 2.7E-79 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DA442_08985 b0876b1ccb5cc2750729fc667a3f7c12 421 TIGRFAM TIGR02407 ectoine_ectB: diaminobutyrate--2-oxoglutarate aminotransferase 2 410 4.8E-206 T 14-10-2018 IPR012773 Ectoine biosynthetic protein GO:0019491|GO:0030170|GO:0047307 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 DA442_08985 b0876b1ccb5cc2750729fc667a3f7c12 421 Gene3D G3DSA:3.40.640.10 54 313 3.8E-105 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_15785 a207737a7a30b93ba259e0b4e81ea499 313 Gene3D G3DSA:3.60.20.30 178 313 4.8E-46 T 14-10-2018 DA442_15785 a207737a7a30b93ba259e0b4e81ea499 313 Pfam PF01112 Asparaginase 7 306 1.3E-109 T 14-10-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 DA442_15785 a207737a7a30b93ba259e0b4e81ea499 313 SUPERFAMILY SSF56235 5 308 3.2E-98 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DA442_06480 80d873d4b255202ec1fc9b47f8bd2c0b 367 Pfam PF01259 SAICAR synthetase 22 293 1.4E-48 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DA442_06480 80d873d4b255202ec1fc9b47f8bd2c0b 367 SUPERFAMILY SSF56104 14 343 9.16E-68 T 14-10-2018 DA442_06480 80d873d4b255202ec1fc9b47f8bd2c0b 367 Gene3D G3DSA:3.30.200.20 12 129 1.7E-24 T 14-10-2018 DA442_06480 80d873d4b255202ec1fc9b47f8bd2c0b 367 Gene3D G3DSA:3.30.470.20 130 292 4.6E-16 T 14-10-2018 DA442_06480 80d873d4b255202ec1fc9b47f8bd2c0b 367 TIGRFAM TIGR02735 purC_vibrio: phosphoribosylaminoimidazole-succinocarboxamide synthase 2 366 2.1E-215 T 14-10-2018 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 DA442_06480 80d873d4b255202ec1fc9b47f8bd2c0b 367 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 19 342 21.731 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DA442_06480 80d873d4b255202ec1fc9b47f8bd2c0b 367 ProSitePatterns PS01057 SAICAR synthetase signature 1. 124 138 - T 14-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DA442_01330 c7bb9e19f566ed9ff41be02ab5006af3 449 Gene3D G3DSA:3.60.15.10 14 435 1.0E-137 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DA442_01330 c7bb9e19f566ed9ff41be02ab5006af3 449 SUPERFAMILY SSF56281 6 444 7.21E-123 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DA442_01330 c7bb9e19f566ed9ff41be02ab5006af3 449 SMART SM00849 21 226 2.3E-19 T 14-10-2018 IPR001279 Metallo-beta-lactamase DA442_01330 c7bb9e19f566ed9ff41be02ab5006af3 449 SMART SM01027 244 374 4.3E-58 T 14-10-2018 IPR022712 Beta-Casp domain DA442_01330 c7bb9e19f566ed9ff41be02ab5006af3 449 Pfam PF00753 Metallo-beta-lactamase superfamily 28 113 1.4E-11 T 14-10-2018 IPR001279 Metallo-beta-lactamase DA442_01330 c7bb9e19f566ed9ff41be02ab5006af3 449 Gene3D G3DSA:3.40.50.10890 212 400 1.0E-137 T 14-10-2018 DA442_01330 c7bb9e19f566ed9ff41be02ab5006af3 449 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 388 449 3.6E-15 T 14-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain DA442_01330 c7bb9e19f566ed9ff41be02ab5006af3 449 Pfam PF10996 Beta-Casp domain 244 374 6.2E-30 T 14-10-2018 IPR022712 Beta-Casp domain DA442_21725 6aa2409e76d972eda7cc1210112d2cf6 710 Gene3D G3DSA:3.30.450.40 174 331 4.9E-8 T 14-10-2018 IPR029016 GAF-like domain superfamily DA442_21725 6aa2409e76d972eda7cc1210112d2cf6 710 SUPERFAMILY SSF55781 179 328 1.74E-6 T 14-10-2018 DA442_21725 6aa2409e76d972eda7cc1210112d2cf6 710 SUPERFAMILY SSF55073 537 698 1.26E-37 T 14-10-2018 IPR029787 Nucleotide cyclase DA442_21725 6aa2409e76d972eda7cc1210112d2cf6 710 Pfam PF00990 Diguanylate cyclase, GGDEF domain 533 693 8.0E-36 T 14-10-2018 IPR000160 GGDEF domain DA442_21725 6aa2409e76d972eda7cc1210112d2cf6 710 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 528 696 5.1E-37 T 14-10-2018 IPR000160 GGDEF domain DA442_21725 6aa2409e76d972eda7cc1210112d2cf6 710 SUPERFAMILY SSF55781 341 513 1.02E-5 T 14-10-2018 DA442_21725 6aa2409e76d972eda7cc1210112d2cf6 710 Gene3D G3DSA:3.30.450.40 332 516 6.8E-6 T 14-10-2018 IPR029016 GAF-like domain superfamily DA442_21725 6aa2409e76d972eda7cc1210112d2cf6 710 SMART SM00267 521 698 5.6E-43 T 14-10-2018 IPR000160 GGDEF domain DA442_21725 6aa2409e76d972eda7cc1210112d2cf6 710 Gene3D G3DSA:3.30.70.270 517 700 2.2E-44 T 14-10-2018 DA442_25450 ae51a10353c59eba049e6c7244471fcb 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 133 151 1.3E-10 T 14-10-2018 IPR002177 DNA-binding protein Dps DA442_25450 ae51a10353c59eba049e6c7244471fcb 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 62 78 1.3E-10 T 14-10-2018 IPR002177 DNA-binding protein Dps DA442_25450 ae51a10353c59eba049e6c7244471fcb 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 38 54 1.3E-10 T 14-10-2018 IPR002177 DNA-binding protein Dps DA442_25450 ae51a10353c59eba049e6c7244471fcb 156 SUPERFAMILY SSF47240 4 154 3.57E-46 T 14-10-2018 IPR009078 Ferritin-like superfamily DA442_25450 ae51a10353c59eba049e6c7244471fcb 156 ProSitePatterns PS00819 Dps protein family signature 2. 64 78 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 DA442_25450 ae51a10353c59eba049e6c7244471fcb 156 PIRSF PIRSF005900 1 156 1.1E-47 T 14-10-2018 IPR002177 DNA-binding protein Dps DA442_25450 ae51a10353c59eba049e6c7244471fcb 156 Pfam PF00210 Ferritin-like domain 18 154 1.4E-28 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 DA442_25450 ae51a10353c59eba049e6c7244471fcb 156 Gene3D G3DSA:1.20.1260.10 1 156 5.3E-57 T 14-10-2018 IPR012347 Ferritin-like DA442_25450 ae51a10353c59eba049e6c7244471fcb 156 ProSitePatterns PS00818 Dps protein family signature 1. 38 54 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 DA442_05105 b89f0457744cf64df95c7658fabfc4aa 1153 Gene3D G3DSA:3.30.2060.10 130 215 2.2E-121 T 14-10-2018 DA442_05105 b89f0457744cf64df95c7658fabfc4aa 1153 Pfam PF00270 DEAD/DEAH box helicase 605 765 1.1E-20 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DA442_05105 b89f0457744cf64df95c7658fabfc4aa 1153 SMART SM00490 826 910 5.4E-19 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_05105 b89f0457744cf64df95c7658fabfc4aa 1153 Gene3D G3DSA:3.40.50.300 542 781 2.3E-237 T 14-10-2018 DA442_05105 b89f0457744cf64df95c7658fabfc4aa 1153 SMART SM00487 600 790 1.9E-33 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DA442_05105 b89f0457744cf64df95c7658fabfc4aa 1153 Pfam PF02559 CarD-like/TRCF domain 480 575 2.1E-26 T 14-10-2018 IPR003711 CarD-like/TRCF domain DA442_05105 b89f0457744cf64df95c7658fabfc4aa 1153 Gene3D G3DSA:3.40.50.300 478 990 2.3E-237 T 14-10-2018 DA442_05105 b89f0457744cf64df95c7658fabfc4aa 1153 SUPERFAMILY SSF141259 470 548 5.23E-25 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily DA442_05105 b89f0457744cf64df95c7658fabfc4aa 1153 Pfam PF03461 TRCF domain 1009 1101 9.0E-28 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 DA442_05105 b89f0457744cf64df95c7658fabfc4aa 1153 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 148 1081 0.0 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 DA442_05105 b89f0457744cf64df95c7658fabfc4aa 1153 Pfam PF00271 Helicase conserved C-terminal domain 807 909 9.5E-17 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_05105 b89f0457744cf64df95c7658fabfc4aa 1153 SUPERFAMILY SSF143517 995 1147 2.22E-43 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain DA442_05105 b89f0457744cf64df95c7658fabfc4aa 1153 Gene3D G3DSA:3.40.50.11140 355 453 2.4E-31 T 14-10-2018 DA442_05105 b89f0457744cf64df95c7658fabfc4aa 1153 SUPERFAMILY SSF52540 523 783 2.78E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_05105 b89f0457744cf64df95c7658fabfc4aa 1153 SMART SM01058 479 576 5.0E-53 T 14-10-2018 IPR003711 CarD-like/TRCF domain DA442_05105 b89f0457744cf64df95c7658fabfc4aa 1153 SUPERFAMILY SSF52540 11 342 5.13E-102 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_05105 b89f0457744cf64df95c7658fabfc4aa 1153 Gene3D G3DSA:2.30.30.840 483 541 2.3E-237 T 14-10-2018 DA442_05105 b89f0457744cf64df95c7658fabfc4aa 1153 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 30 1108 28.064 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 DA442_05105 b89f0457744cf64df95c7658fabfc4aa 1153 SMART SM00982 1008 1108 5.2E-47 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 DA442_05105 b89f0457744cf64df95c7658fabfc4aa 1153 SUPERFAMILY SSF52540 351 466 2.02E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_05105 b89f0457744cf64df95c7658fabfc4aa 1153 Gene3D G3DSA:3.40.50.11180 26 334 2.2E-121 T 14-10-2018 DA442_05105 b89f0457744cf64df95c7658fabfc4aa 1153 Gene3D G3DSA:3.90.1150.50 1004 1150 6.2E-45 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain DA442_05105 b89f0457744cf64df95c7658fabfc4aa 1153 SUPERFAMILY SSF52540 782 990 5.97E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_20985 47cc84fa16592d9861e1095398d0ad2c 351 Pfam PF13533 Biotin-lipoyl like 44 91 8.1E-14 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain DA442_20985 47cc84fa16592d9861e1095398d0ad2c 351 SUPERFAMILY SSF111369 168 245 1.1E-7 T 14-10-2018 DA442_20985 47cc84fa16592d9861e1095398d0ad2c 351 SUPERFAMILY SSF111369 44 166 9.02E-13 T 14-10-2018 DA442_20985 47cc84fa16592d9861e1095398d0ad2c 351 Gene3D G3DSA:1.10.287.470 77 199 1.4E-36 T 14-10-2018 DA442_20985 47cc84fa16592d9861e1095398d0ad2c 351 Gene3D G3DSA:2.40.30.170 234 278 1.4E-36 T 14-10-2018 DA442_20985 47cc84fa16592d9861e1095398d0ad2c 351 Gene3D G3DSA:2.40.50.100 45 233 1.4E-36 T 14-10-2018 DA442_22280 3029aaa46c292c6687b618c98a4c7cb2 156 SUPERFAMILY SSF55729 1 152 2.16E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_22280 3029aaa46c292c6687b618c98a4c7cb2 156 Gene3D G3DSA:3.40.630.30 2 154 4.1E-22 T 14-10-2018 DA442_22280 3029aaa46c292c6687b618c98a4c7cb2 156 Pfam PF00583 Acetyltransferase (GNAT) family 39 134 4.9E-10 T 14-10-2018 IPR000182 GNAT domain DA442_01440 96fd3b1d306a8d7654030b22d23764e0 274 SUPERFAMILY SSF50104 127 272 1.68E-61 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily DA442_01440 96fd3b1d306a8d7654030b22d23764e0 274 SMART SM01382 124 252 5.1E-92 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 DA442_01440 96fd3b1d306a8d7654030b22d23764e0 274 Gene3D G3DSA:2.30.30.30 115 195 7.5E-33 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 DA442_01440 96fd3b1d306a8d7654030b22d23764e0 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 2.1E-130 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 DA442_01440 96fd3b1d306a8d7654030b22d23764e0 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 14-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01440 96fd3b1d306a8d7654030b22d23764e0 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 2.2E-56 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 DA442_01440 96fd3b1d306a8d7654030b22d23764e0 274 SUPERFAMILY SSF50249 2 125 1.3E-49 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_01440 96fd3b1d306a8d7654030b22d23764e0 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 1.5E-32 T 14-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_01440 96fd3b1d306a8d7654030b22d23764e0 274 PIRSF PIRSF002158 13 274 6.9E-101 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_01440 96fd3b1d306a8d7654030b22d23764e0 274 Gene3D G3DSA:4.10.950.10 196 274 1.1E-36 T 14-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01440 96fd3b1d306a8d7654030b22d23764e0 274 Gene3D G3DSA:2.40.50.140 1 114 9.5E-50 T 14-10-2018 DA442_01440 96fd3b1d306a8d7654030b22d23764e0 274 SMART SM01383 42 118 1.7E-44 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_01440 96fd3b1d306a8d7654030b22d23764e0 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 47.389 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 DA442_08225 c12f2f12aaf44d6a730f9b0be444291c 297 PIRSF PIRSF004976 2 282 3.6E-70 T 14-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 DA442_08225 c12f2f12aaf44d6a730f9b0be444291c 297 Pfam PF01171 PP-loop family 41 203 4.5E-16 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 DA442_08225 c12f2f12aaf44d6a730f9b0be444291c 297 SUPERFAMILY SSF52402 15 233 7.68E-54 T 14-10-2018 DA442_08225 c12f2f12aaf44d6a730f9b0be444291c 297 Gene3D G3DSA:3.40.50.620 2 265 1.1E-48 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DA442_08225 c12f2f12aaf44d6a730f9b0be444291c 297 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 8 269 56.371 T 14-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 DA442_20075 d4f67a0b9489376587aee82f8a06bb20 113 SUPERFAMILY SSF47226 2 112 1.09E-16 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 DA442_20075 d4f67a0b9489376587aee82f8a06bb20 113 Gene3D G3DSA:1.20.120.160 1 113 3.9E-11 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 DA442_16710 3bb12651b423c8f51990b5723f7c4c2c 151 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 64 133 2.1E-17 T 14-10-2018 IPR000504 RNA recognition motif domain GO:0003676 DA442_16710 3bb12651b423c8f51990b5723f7c4c2c 151 SMART SM00360 63 135 2.1E-20 T 14-10-2018 IPR000504 RNA recognition motif domain GO:0003676 DA442_16710 3bb12651b423c8f51990b5723f7c4c2c 151 SUPERFAMILY SSF54928 47 141 2.42E-27 T 14-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 DA442_16710 3bb12651b423c8f51990b5723f7c4c2c 151 Gene3D G3DSA:3.30.70.330 44 149 1.6E-26 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily DA442_11495 72d960ee038a1e4aa66dd3e714ce6ba0 416 SUPERFAMILY SSF53901 3 252 7.68E-81 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DA442_11495 72d960ee038a1e4aa66dd3e714ce6ba0 416 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 412 8.8E-193 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 DA442_11495 72d960ee038a1e4aa66dd3e714ce6ba0 416 SUPERFAMILY SSF53901 215 414 5.76E-67 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DA442_11495 72d960ee038a1e4aa66dd3e714ce6ba0 416 PIRSF PIRSF000447 1 416 1.8E-203 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 DA442_11495 72d960ee038a1e4aa66dd3e714ce6ba0 416 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 370 5.0E-36 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal DA442_11495 72d960ee038a1e4aa66dd3e714ce6ba0 416 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site DA442_11495 72d960ee038a1e4aa66dd3e714ce6ba0 416 Gene3D G3DSA:3.40.47.10 261 414 3.8E-52 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DA442_11495 72d960ee038a1e4aa66dd3e714ce6ba0 416 Gene3D G3DSA:3.40.47.10 1 255 1.2E-93 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DA442_11495 72d960ee038a1e4aa66dd3e714ce6ba0 416 SMART SM00825 Beta-ketoacyl synthase 6 416 3.5E-16 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DA442_11495 72d960ee038a1e4aa66dd3e714ce6ba0 416 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 3.3E-65 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal DA442_09620 dae7ecd1565a974b838c83970d548411 490 Gene3D G3DSA:3.40.50.300 4 97 2.8E-8 T 14-10-2018 DA442_09620 dae7ecd1565a974b838c83970d548411 490 Pfam PF13476 AAA domain 6 165 1.7E-10 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain DA442_09620 dae7ecd1565a974b838c83970d548411 490 Gene3D G3DSA:3.40.50.300 106 278 1.7E-10 T 14-10-2018 DA442_09620 dae7ecd1565a974b838c83970d548411 490 SUPERFAMILY SSF52540 6 273 5.15E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_16515 a7fe7f129311e398727bf9c00abc051e 90 Gene3D G3DSA:4.10.520.10 1 90 4.5E-37 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DA442_16515 a7fe7f129311e398727bf9c00abc051e 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 5.7E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DA442_16515 a7fe7f129311e398727bf9c00abc051e 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 5.7E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DA442_16515 a7fe7f129311e398727bf9c00abc051e 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 5.7E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DA442_16515 a7fe7f129311e398727bf9c00abc051e 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.7E-33 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DA442_16515 a7fe7f129311e398727bf9c00abc051e 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 DA442_16515 a7fe7f129311e398727bf9c00abc051e 90 SMART SM00411 1 90 1.6E-46 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DA442_16515 a7fe7f129311e398727bf9c00abc051e 90 SUPERFAMILY SSF47729 1 90 5.3E-33 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DA442_03185 f6f5f9c30adf03e1bd85e7665dcb68f9 74 SUPERFAMILY SSF161187 3 70 1.31E-26 T 14-10-2018 DA442_03185 f6f5f9c30adf03e1bd85e7665dcb68f9 74 Pfam PF07191 zinc-ribbons 5 68 5.4E-27 T 14-10-2018 IPR010807 Protein of unknown function DUF1407 DA442_03185 f6f5f9c30adf03e1bd85e7665dcb68f9 74 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 6 68 2.0E-31 T 14-10-2018 IPR010807 Protein of unknown function DUF1407 DA442_03185 f6f5f9c30adf03e1bd85e7665dcb68f9 74 Gene3D G3DSA:2.10.290.10 2 71 8.8E-27 T 14-10-2018 IPR029037 YfgJ-like DA442_02555 16445c372c364734ae52b9fc94475028 295 SMART SM00518 12 288 7.4E-123 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 DA442_02555 16445c372c364734ae52b9fc94475028 295 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 224 240 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 DA442_02555 16445c372c364734ae52b9fc94475028 295 Hamap MF_00152 Probable endonuclease 4 [nfo]. 11 288 42.349 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 DA442_02555 16445c372c364734ae52b9fc94475028 295 Gene3D G3DSA:3.20.20.150 10 292 4.0E-112 T 14-10-2018 DA442_02555 16445c372c364734ae52b9fc94475028 295 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 78 86 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 DA442_02555 16445c372c364734ae52b9fc94475028 295 SUPERFAMILY SSF51658 12 286 6.81E-100 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily DA442_02555 16445c372c364734ae52b9fc94475028 295 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 184 191 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 DA442_02555 16445c372c364734ae52b9fc94475028 295 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 11 287 6.5E-108 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 DA442_02555 16445c372c364734ae52b9fc94475028 295 Pfam PF01261 Xylose isomerase-like TIM barrel 29 248 6.9E-42 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DA442_18120 89d93ce705de988f87ef6c0ead16958a 106 SUPERFAMILY SSF143410 1 102 7.32E-34 T 14-10-2018 IPR023389 DOPA-like superfamily DA442_18120 89d93ce705de988f87ef6c0ead16958a 106 Gene3D G3DSA:3.30.70.1240 1 104 8.6E-30 T 14-10-2018 IPR023389 DOPA-like superfamily DA442_18120 89d93ce705de988f87ef6c0ead16958a 106 PIRSF PIRSF028139 1 106 8.9E-43 T 14-10-2018 IPR014980 Dopa 4,5-dioxygenase DA442_18120 89d93ce705de988f87ef6c0ead16958a 106 Pfam PF08883 Dopa 4,5-dioxygenase family 2 99 1.4E-28 T 14-10-2018 IPR014980 Dopa 4,5-dioxygenase DA442_22355 4cff2a7a59ae17b6e9743e1dab6fa898 72 Gene3D G3DSA:1.10.720.30 14 71 3.7E-30 T 14-10-2018 IPR036361 SAP domain superfamily DA442_22355 4cff2a7a59ae17b6e9743e1dab6fa898 72 Pfam PF09905 DNA-binding protein VF530 6 68 9.3E-35 T 14-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 DA442_00185 312463128da5ad3db65af7c423a47f95 368 SUPERFAMILY SSF111369 58 273 1.44E-42 T 14-10-2018 DA442_00185 312463128da5ad3db65af7c423a47f95 368 Gene3D G3DSA:2.40.30.170 58 279 2.2E-74 T 14-10-2018 DA442_00185 312463128da5ad3db65af7c423a47f95 368 Gene3D G3DSA:2.40.50.100 68 196 2.2E-74 T 14-10-2018 DA442_00185 312463128da5ad3db65af7c423a47f95 368 Gene3D G3DSA:1.10.287.470 103 162 2.2E-74 T 14-10-2018 DA442_00185 312463128da5ad3db65af7c423a47f95 368 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 269 2.5E-29 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DA442_00185 312463128da5ad3db65af7c423a47f95 368 Gene3D G3DSA:2.40.420.20 280 351 2.2E-74 T 14-10-2018 DA442_00185 312463128da5ad3db65af7c423a47f95 368 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 353 1.3E-74 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DA442_09045 176eee17d8e3a03db157d58e16b76802 211 SUPERFAMILY SSF48452 50 181 2.28E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_09045 176eee17d8e3a03db157d58e16b76802 211 Pfam PF13181 Tetratricopeptide repeat 137 155 0.034 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_09045 176eee17d8e3a03db157d58e16b76802 211 Gene3D G3DSA:1.25.40.10 17 190 2.3E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_00630 b097d272efc3934bae82ae4aace570f5 469 SUPERFAMILY SSF55931 102 468 3.92E-137 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 DA442_00630 b097d272efc3934bae82ae4aace570f5 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 6.3E-139 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DA442_00630 b097d272efc3934bae82ae4aace570f5 469 Gene3D G3DSA:3.30.590.10 105 457 7.2E-149 T 14-10-2018 DA442_00630 b097d272efc3934bae82ae4aace570f5 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 DA442_00630 b097d272efc3934bae82ae4aace570f5 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 3.5E-212 T 14-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DA442_00630 b097d272efc3934bae82ae4aace570f5 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 14-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 DA442_00630 b097d272efc3934bae82ae4aace570f5 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 14-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DA442_00630 b097d272efc3934bae82ae4aace570f5 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 9.0E-31 T 14-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 DA442_00630 b097d272efc3934bae82ae4aace570f5 469 SMART SM01230 102 379 1.9E-152 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DA442_00630 b097d272efc3934bae82ae4aace570f5 469 Gene3D G3DSA:3.10.20.70 2 104 1.7E-40 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DA442_00630 b097d272efc3934bae82ae4aace570f5 469 SUPERFAMILY SSF54368 3 100 5.89E-36 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DA442_25070 54c5a9a95ff06c1bf3e360872b780d5d 268 Pfam PF00196 Bacterial regulatory proteins, luxR family 204 258 1.4E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_25070 54c5a9a95ff06c1bf3e360872b780d5d 268 SUPERFAMILY SSF46894 197 262 2.11E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DA442_25070 54c5a9a95ff06c1bf3e360872b780d5d 268 Gene3D G3DSA:1.10.10.10 181 265 1.6E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_25070 54c5a9a95ff06c1bf3e360872b780d5d 268 SMART SM00421 202 259 8.3E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_25070 54c5a9a95ff06c1bf3e360872b780d5d 268 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 205 219 8.1E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_25070 54c5a9a95ff06c1bf3e360872b780d5d 268 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 235 247 8.1E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_25070 54c5a9a95ff06c1bf3e360872b780d5d 268 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 219 235 8.1E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_03620 f03726e36f905d5ccae9c791685d04ca 344 Pfam PF00005 ABC transporter 21 169 1.1E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_03620 f03726e36f905d5ccae9c791685d04ca 344 Gene3D G3DSA:3.40.50.300 1 232 2.5E-74 T 14-10-2018 DA442_03620 f03726e36f905d5ccae9c791685d04ca 344 SUPERFAMILY SSF52540 1 239 3.38E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_03620 f03726e36f905d5ccae9c791685d04ca 344 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_03620 f03726e36f905d5ccae9c791685d04ca 344 SUPERFAMILY SSF55021 248 343 1.26E-25 T 14-10-2018 DA442_03620 f03726e36f905d5ccae9c791685d04ca 344 SMART SM00930 265 340 9.3E-27 T 14-10-2018 IPR018449 NIL domain DA442_03620 f03726e36f905d5ccae9c791685d04ca 344 Pfam PF09383 NIL domain 268 339 2.2E-20 T 14-10-2018 IPR018449 NIL domain DA442_03620 f03726e36f905d5ccae9c791685d04ca 344 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 1.1E-198 T 14-10-2018 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 DA442_03620 f03726e36f905d5ccae9c791685d04ca 344 SMART SM00382 30 235 7.6E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_03620 f03726e36f905d5ccae9c791685d04ca 344 Gene3D G3DSA:3.30.70.260 244 344 9.4E-42 T 14-10-2018 DA442_18370 66fae545fe5c09c8cbcee1ab1c96fdb3 375 SUPERFAMILY SSF48371 89 231 4.48E-8 T 14-10-2018 IPR016024 Armadillo-type fold DA442_18370 66fae545fe5c09c8cbcee1ab1c96fdb3 375 SUPERFAMILY SSF48452 195 329 6.83E-20 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_18370 66fae545fe5c09c8cbcee1ab1c96fdb3 375 Gene3D G3DSA:1.25.40.10 195 371 6.2E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_18370 66fae545fe5c09c8cbcee1ab1c96fdb3 375 Gene3D G3DSA:1.25.10.10 46 194 3.8E-6 T 14-10-2018 IPR011989 Armadillo-like helical DA442_18370 66fae545fe5c09c8cbcee1ab1c96fdb3 375 SMART SM00028 191 224 79.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_18370 66fae545fe5c09c8cbcee1ab1c96fdb3 375 SMART SM00028 259 292 89.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_18370 66fae545fe5c09c8cbcee1ab1c96fdb3 375 SMART SM00028 225 258 0.0023 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_18370 66fae545fe5c09c8cbcee1ab1c96fdb3 375 Pfam PF14559 Tetratricopeptide repeat 206 262 3.5E-8 T 14-10-2018 DA442_11360 cda0779dcd73a623775a9d1448b4f28c 233 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 6 226 4.7E-58 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DA442_11360 cda0779dcd73a623775a9d1448b4f28c 233 SMART SM00934 5 226 1.5E-101 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DA442_11360 cda0779dcd73a623775a9d1448b4f28c 233 Gene3D G3DSA:3.20.20.70 2 230 1.0E-85 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_11360 cda0779dcd73a623775a9d1448b4f28c 233 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 231 40.486 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DA442_11360 cda0779dcd73a623775a9d1448b4f28c 233 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 225 2.8E-51 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DA442_11360 cda0779dcd73a623775a9d1448b4f28c 233 SUPERFAMILY SSF51366 1 228 1.63E-77 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DA442_11360 cda0779dcd73a623775a9d1448b4f28c 233 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 57 70 - T 14-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DA442_23715 80283f8294654ef54b23c9767f61d605 435 Gene3D G3DSA:1.10.3360.10 33 253 2.0E-9 T 14-10-2018 IPR023289 VPA0735-like domain superfamily DA442_23715 80283f8294654ef54b23c9767f61d605 435 Pfam PF06863 Protein of unknown function (DUF1254) 59 188 3.2E-30 T 14-10-2018 IPR010679 Domain of unknown function DUF1254 DA442_23715 80283f8294654ef54b23c9767f61d605 435 Pfam PF06742 Protein of unknown function (DUF1214) 313 417 5.1E-25 T 14-10-2018 IPR010621 Domain of unknown function DUF1214 DA442_23715 80283f8294654ef54b23c9767f61d605 435 Gene3D G3DSA:2.60.120.1600 315 435 8.3E-46 T 14-10-2018 DA442_23715 80283f8294654ef54b23c9767f61d605 435 SUPERFAMILY SSF160935 6 434 8.76E-106 T 14-10-2018 DA442_23715 80283f8294654ef54b23c9767f61d605 435 Gene3D G3DSA:2.60.40.1610 58 209 2.0E-9 T 14-10-2018 IPR037050 Domain of unknown function DUF1254 superfamily DA442_06845 296b886a7f650b0998aa1d3e944d84c4 304 PIRSF PIRSF001365 1 301 2.5E-86 T 14-10-2018 IPR002220 DapA-like GO:0016829 DA442_06845 296b886a7f650b0998aa1d3e944d84c4 304 Gene3D G3DSA:3.20.20.70 1 296 8.3E-88 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_06845 296b886a7f650b0998aa1d3e944d84c4 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 1.8E-10 T 14-10-2018 IPR002220 DapA-like GO:0016829 DA442_06845 296b886a7f650b0998aa1d3e944d84c4 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 1.8E-10 T 14-10-2018 IPR002220 DapA-like GO:0016829 DA442_06845 296b886a7f650b0998aa1d3e944d84c4 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 132 149 1.8E-10 T 14-10-2018 IPR002220 DapA-like GO:0016829 DA442_06845 296b886a7f650b0998aa1d3e944d84c4 304 SMART SM01130 4 293 9.6E-98 T 14-10-2018 IPR002220 DapA-like GO:0016829 DA442_06845 296b886a7f650b0998aa1d3e944d84c4 304 SUPERFAMILY SSF51569 3 291 3.14E-86 T 14-10-2018 DA442_06845 296b886a7f650b0998aa1d3e944d84c4 304 Pfam PF00701 Dihydrodipicolinate synthetase family 6 291 3.9E-62 T 14-10-2018 IPR002220 DapA-like GO:0016829 DA442_12540 2e76fe79c777efd6005bd9d2a7a63553 116 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 112 2.6E-31 T 14-10-2018 IPR006504 Transcriptional regulator Spx/MgsR DA442_12540 2e76fe79c777efd6005bd9d2a7a63553 116 Pfam PF03960 ArsC family 6 112 5.2E-19 T 14-10-2018 IPR006660 Arsenate reductase-like DA442_12540 2e76fe79c777efd6005bd9d2a7a63553 116 Gene3D G3DSA:3.40.30.10 2 114 2.5E-42 T 14-10-2018 DA442_12540 2e76fe79c777efd6005bd9d2a7a63553 116 SUPERFAMILY SSF52833 2 114 1.27E-35 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_00375 7021a1536f1878f2818cad533f217940 154 SMART SM00344 8 115 5.0E-40 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DA442_00375 7021a1536f1878f2818cad533f217940 154 Pfam PF01037 Lrp/AsnC ligand binding domain 75 145 1.4E-16 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DA442_00375 7021a1536f1878f2818cad533f217940 154 Gene3D G3DSA:1.10.10.10 6 59 2.6E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_00375 7021a1536f1878f2818cad533f217940 154 SUPERFAMILY SSF54909 69 154 4.42E-19 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel DA442_00375 7021a1536f1878f2818cad533f217940 154 SUPERFAMILY SSF46785 7 68 2.03E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_00375 7021a1536f1878f2818cad533f217940 154 Gene3D G3DSA:3.30.70.920 60 142 1.9E-31 T 14-10-2018 DA442_00375 7021a1536f1878f2818cad533f217940 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 1.3E-9 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DA442_00375 7021a1536f1878f2818cad533f217940 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 1.3E-9 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DA442_00375 7021a1536f1878f2818cad533f217940 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 1.3E-9 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DA442_00375 7021a1536f1878f2818cad533f217940 154 Pfam PF13404 AsnC-type helix-turn-helix domain 8 49 6.0E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DA442_14725 5efc6e73bba9a4150f8875ef4dd47e6c 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DA442_14725 5efc6e73bba9a4150f8875ef4dd47e6c 384 PIRSF PIRSF000497 1 381 9.8E-175 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DA442_14725 5efc6e73bba9a4150f8875ef4dd47e6c 384 Gene3D G3DSA:3.30.300.10 5 233 1.9E-179 T 14-10-2018 DA442_14725 5efc6e73bba9a4150f8875ef4dd47e6c 384 Gene3D G3DSA:3.30.300.10 11 270 1.9E-179 T 14-10-2018 DA442_14725 5efc6e73bba9a4150f8875ef4dd47e6c 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 2.8E-45 T 14-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DA442_14725 5efc6e73bba9a4150f8875ef4dd47e6c 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DA442_14725 5efc6e73bba9a4150f8875ef4dd47e6c 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 59.186 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DA442_14725 5efc6e73bba9a4150f8875ef4dd47e6c 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 3.5E-43 T 14-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DA442_14725 5efc6e73bba9a4150f8875ef4dd47e6c 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 379 2.2E-197 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DA442_14725 5efc6e73bba9a4150f8875ef4dd47e6c 384 SUPERFAMILY SSF55973 3 109 1.61E-47 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DA442_14725 5efc6e73bba9a4150f8875ef4dd47e6c 384 SUPERFAMILY SSF55973 111 232 1.49E-51 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DA442_14725 5efc6e73bba9a4150f8875ef4dd47e6c 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 369 6.1E-69 T 14-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DA442_14725 5efc6e73bba9a4150f8875ef4dd47e6c 384 SUPERFAMILY SSF55973 233 382 5.89E-71 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DA442_14725 5efc6e73bba9a4150f8875ef4dd47e6c 384 Gene3D G3DSA:3.30.300.10 103 372 1.9E-179 T 14-10-2018 DA442_13180 3f05f3e41c070667fbd4a6583b060b7a 519 Pfam PF01266 FAD dependent oxidoreductase 17 335 1.5E-48 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DA442_13180 3f05f3e41c070667fbd4a6583b060b7a 519 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 393 501 3.4E-12 T 14-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DA442_13180 3f05f3e41c070667fbd4a6583b060b7a 519 SUPERFAMILY SSF51905 17 385 1.04E-30 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_13180 3f05f3e41c070667fbd4a6583b060b7a 519 Gene3D G3DSA:3.50.50.60 17 378 1.1E-142 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_13180 3f05f3e41c070667fbd4a6583b060b7a 519 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 21 38 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DA442_13180 3f05f3e41c070667fbd4a6583b060b7a 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 325 331 3.8E-29 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DA442_13180 3f05f3e41c070667fbd4a6583b060b7a 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 90 102 3.8E-29 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DA442_13180 3f05f3e41c070667fbd4a6583b060b7a 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 29 39 3.8E-29 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DA442_13180 3f05f3e41c070667fbd4a6583b060b7a 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 16 28 3.8E-29 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DA442_13180 3f05f3e41c070667fbd4a6583b060b7a 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 359 371 3.8E-29 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DA442_13180 3f05f3e41c070667fbd4a6583b060b7a 519 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 45 57 3.8E-29 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DA442_13180 3f05f3e41c070667fbd4a6583b060b7a 519 Gene3D G3DSA:3.30.9.10 94 332 1.1E-142 T 14-10-2018 DA442_13180 3f05f3e41c070667fbd4a6583b060b7a 519 Gene3D G3DSA:1.10.8.870 404 475 1.2E-14 T 14-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DA442_06260 c3cd109b87a3d89479b21ca67397602c 754 Gene3D G3DSA:3.90.10.10 282 387 6.9E-5 T 14-10-2018 DA442_06260 c3cd109b87a3d89479b21ca67397602c 754 Pfam PF14522 Cytochrome c7 and related cytochrome c 647 736 1.0E-5 T 14-10-2018 IPR029467 C-type polyheme cytochrome OmcB DA442_06260 c3cd109b87a3d89479b21ca67397602c 754 TIGRFAM TIGR03507 decahem_SO1788: decaheme c-type cytochrome, OmcA/MtrC family 52 748 1.5E-125 T 14-10-2018 IPR020014 Decahaem cytochrome, c-type, OmcA/MtrC DA442_06260 c3cd109b87a3d89479b21ca67397602c 754 SUPERFAMILY SSF48695 192 736 6.9E-36 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily DA442_01680 0c53c730c41101d3aed64d9f1047303b 115 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 5 112 1.5E-25 T 14-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like DA442_01680 0c53c730c41101d3aed64d9f1047303b 115 SUPERFAMILY SSF110857 3 114 5.36E-33 T 14-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily DA442_01680 0c53c730c41101d3aed64d9f1047303b 115 Gene3D G3DSA:3.10.490.10 4 115 6.5E-38 T 14-10-2018 DA442_22920 13368dbd1c5a281771b15db696a009bd 230 SUPERFAMILY SSF50800 3 227 2.67E-71 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily DA442_22920 13368dbd1c5a281771b15db696a009bd 230 Gene3D G3DSA:2.40.33.20 1 230 3.2E-69 T 14-10-2018 DA442_22920 13368dbd1c5a281771b15db696a009bd 230 Pfam PF03473 MOSC domain 49 163 2.7E-22 T 14-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 DA442_22920 13368dbd1c5a281771b15db696a009bd 230 Pfam PF03475 3-alpha domain 173 215 2.2E-10 T 14-10-2018 IPR005163 3-alpha domain DA442_15225 f357059d8c5d6d7059eb7fbb93ea84c0 969 SMART SM00490 519 603 2.7E-17 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_15225 f357059d8c5d6d7059eb7fbb93ea84c0 969 Pfam PF12137 RNA polymerase recycling family C-terminal 607 966 2.7E-148 T 14-10-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 DA442_15225 f357059d8c5d6d7059eb7fbb93ea84c0 969 SUPERFAMILY SSF52540 273 649 2.59E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_15225 f357059d8c5d6d7059eb7fbb93ea84c0 969 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 967 29.163 T 14-10-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 DA442_15225 f357059d8c5d6d7059eb7fbb93ea84c0 969 SUPERFAMILY SSF52540 127 378 1.46E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_15225 f357059d8c5d6d7059eb7fbb93ea84c0 969 Gene3D G3DSA:3.40.50.300 484 627 1.8E-25 T 14-10-2018 DA442_15225 f357059d8c5d6d7059eb7fbb93ea84c0 969 Pfam PF00176 SNF2 family N-terminal domain 174 344 8.5E-15 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 DA442_15225 f357059d8c5d6d7059eb7fbb93ea84c0 969 Pfam PF00271 Helicase conserved C-terminal domain 494 603 4.2E-16 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_15225 f357059d8c5d6d7059eb7fbb93ea84c0 969 Gene3D G3DSA:3.30.360.80 714 786 3.2E-30 T 14-10-2018 DA442_15225 f357059d8c5d6d7059eb7fbb93ea84c0 969 SMART SM00487 150 342 3.8E-15 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DA442_15225 f357059d8c5d6d7059eb7fbb93ea84c0 969 Gene3D G3DSA:3.40.50.10810 628 713 2.6E-6 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily DA442_15225 f357059d8c5d6d7059eb7fbb93ea84c0 969 Gene3D G3DSA:3.40.50.10810 150 438 1.5E-105 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily DA442_15225 f357059d8c5d6d7059eb7fbb93ea84c0 969 Gene3D G3DSA:2.30.30.140 1 53 4.9E-24 T 14-10-2018 DA442_15225 f357059d8c5d6d7059eb7fbb93ea84c0 969 Gene3D G3DSA:2.30.30.930 55 114 5.4E-26 T 14-10-2018 DA442_23145 72a65e7d2e1c2bfa43ea6fa5e294885e 300 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 187 204 - T 14-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 DA442_23145 72a65e7d2e1c2bfa43ea6fa5e294885e 300 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 4 297 43.587 T 14-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 DA442_23145 72a65e7d2e1c2bfa43ea6fa5e294885e 300 Pfam PF01380 SIS domain 129 212 5.3E-8 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DA442_23145 72a65e7d2e1c2bfa43ea6fa5e294885e 300 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 8 297 3.2E-133 T 14-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 DA442_23145 72a65e7d2e1c2bfa43ea6fa5e294885e 300 SUPERFAMILY SSF53697 8 250 1.45E-71 T 14-10-2018 DA442_23145 72a65e7d2e1c2bfa43ea6fa5e294885e 300 Gene3D G3DSA:3.40.50.10490 1 220 3.0E-83 T 14-10-2018 DA442_23145 72a65e7d2e1c2bfa43ea6fa5e294885e 300 Gene3D G3DSA:1.10.8.1080 221 299 9.9E-29 T 14-10-2018 DA442_25065 b9aafeec1e3618308efef63deabba23f 419 SUPERFAMILY SSF55174 323 416 1.22E-13 T 14-10-2018 DA442_25065 b9aafeec1e3618308efef63deabba23f 419 Pfam PF00579 tRNA synthetases class I (W and Y) 31 325 2.5E-81 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 DA442_25065 b9aafeec1e3618308efef63deabba23f 419 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 50 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DA442_25065 b9aafeec1e3618308efef63deabba23f 419 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 218 230 8.4E-32 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DA442_25065 b9aafeec1e3618308efef63deabba23f 419 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 44 66 8.4E-32 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DA442_25065 b9aafeec1e3618308efef63deabba23f 419 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 164 179 8.4E-32 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DA442_25065 b9aafeec1e3618308efef63deabba23f 419 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 185 207 8.4E-32 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DA442_25065 b9aafeec1e3618308efef63deabba23f 419 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 3 417 43.912 T 14-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 DA442_25065 b9aafeec1e3618308efef63deabba23f 419 Gene3D G3DSA:3.40.50.620 2 224 1.6E-87 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DA442_25065 b9aafeec1e3618308efef63deabba23f 419 SUPERFAMILY SSF52374 3 325 8.44E-101 T 14-10-2018 DA442_25065 b9aafeec1e3618308efef63deabba23f 419 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 3 416 2.8E-124 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DA442_25065 b9aafeec1e3618308efef63deabba23f 419 Gene3D G3DSA:1.10.240.10 225 327 1.5E-36 T 14-10-2018 DA442_25065 b9aafeec1e3618308efef63deabba23f 419 Gene3D G3DSA:3.10.290.10 328 419 1.9E-22 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DA442_22640 1fc04c3d0e5aaff1becbcca1412b105e 663 SUPERFAMILY SSF51011 556 648 3.16E-13 T 14-10-2018 DA442_22640 1fc04c3d0e5aaff1becbcca1412b105e 663 Gene3D G3DSA:2.60.40.1180 555 649 1.9E-6 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta DA442_22640 1fc04c3d0e5aaff1becbcca1412b105e 663 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 7 647 1.3E-200 T 14-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 DA442_22640 1fc04c3d0e5aaff1becbcca1412b105e 663 Gene3D G3DSA:3.20.20.80 116 551 2.4E-142 T 14-10-2018 DA442_22640 1fc04c3d0e5aaff1becbcca1412b105e 663 SUPERFAMILY SSF51445 112 542 9.78E-97 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DA442_22640 1fc04c3d0e5aaff1becbcca1412b105e 663 Gene3D G3DSA:2.60.40.10 5 115 7.6E-18 T 14-10-2018 IPR013783 Immunoglobulin-like fold DA442_22640 1fc04c3d0e5aaff1becbcca1412b105e 663 Pfam PF00128 Alpha amylase, catalytic domain 199 268 1.0E-5 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DA442_22640 1fc04c3d0e5aaff1becbcca1412b105e 663 SMART SM00642 145 547 2.1E-4 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DA442_22640 1fc04c3d0e5aaff1becbcca1412b105e 663 SUPERFAMILY SSF81296 7 123 3.5E-20 T 14-10-2018 IPR014756 Immunoglobulin E-set DA442_20590 c04d32368b11593d9fcd744ebba7cd0e 613 SUPERFAMILY SSF52518 231 490 1.77E-63 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DA442_20590 c04d32368b11593d9fcd744ebba7cd0e 613 TIGRFAM TIGR03710 OAFO_sf: 2-oxoacid:acceptor oxidoreductase, alpha subunit 10 602 5.9E-188 T 14-10-2018 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit KEGG: 00020+1.2.7.3|KEGG: 00720+1.2.7.3|MetaCyc: PWY-5392|MetaCyc: PWY-6969 DA442_20590 c04d32368b11593d9fcd744ebba7cd0e 613 Gene3D G3DSA:3.40.920.10 8 218 8.2E-12 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 DA442_20590 c04d32368b11593d9fcd744ebba7cd0e 613 Gene3D G3DSA:3.40.50.920 497 607 4.2E-19 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DA442_20590 c04d32368b11593d9fcd744ebba7cd0e 613 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 256 438 7.3E-52 T 14-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 DA442_20590 c04d32368b11593d9fcd744ebba7cd0e 613 Gene3D G3DSA:3.40.50.970 219 423 1.3E-65 T 14-10-2018 DA442_20590 c04d32368b11593d9fcd744ebba7cd0e 613 SUPERFAMILY SSF52922 508 608 6.12E-13 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DA442_20590 c04d32368b11593d9fcd744ebba7cd0e 613 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 510 575 1.9E-8 T 14-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II DA442_20590 c04d32368b11593d9fcd744ebba7cd0e 613 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 17 206 2.1E-21 T 14-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 DA442_00950 029231883eeedccc974d7ca686ad1971 290 Gene3D G3DSA:1.10.150.130 2 93 8.9E-8 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal DA442_00950 029231883eeedccc974d7ca686ad1971 290 Pfam PF12835 Integrase 102 225 3.1E-16 T 14-10-2018 IPR024456 Integrase catalytic domain, putative DA442_00950 029231883eeedccc974d7ca686ad1971 290 SUPERFAMILY SSF56349 9 224 8.54E-14 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DA442_23550 16a7d51bde6e4e7d1ce725adbff2cefc 289 Gene3D G3DSA:3.40.190.290 93 287 1.4E-68 T 14-10-2018 DA442_23550 16a7d51bde6e4e7d1ce725adbff2cefc 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 63 2.2E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_23550 16a7d51bde6e4e7d1ce725adbff2cefc 289 Gene3D G3DSA:1.10.10.10 3 92 1.6E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_23550 16a7d51bde6e4e7d1ce725adbff2cefc 289 SUPERFAMILY SSF46785 4 87 9.68E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_23550 16a7d51bde6e4e7d1ce725adbff2cefc 289 Pfam PF03466 LysR substrate binding domain 88 288 3.9E-47 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_23550 16a7d51bde6e4e7d1ce725adbff2cefc 289 SUPERFAMILY SSF53850 89 289 2.17E-47 T 14-10-2018 DA442_21325 85f7341ab2331d089b6d9cfc4837b67b 157 SUPERFAMILY SSF52833 1 156 1.55E-33 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_21325 85f7341ab2331d089b6d9cfc4837b67b 157 Pfam PF08534 Redoxin 3 154 2.0E-38 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 DA442_21325 85f7341ab2331d089b6d9cfc4837b67b 157 Gene3D G3DSA:3.40.30.10 2 157 7.9E-60 T 14-10-2018 DA442_03660 586cfbe13e54e64a18aaca8a45a05512 200 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 11 190 9.2E-36 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT DA442_11805 f6052482c0bd65097e9bdc0a4aff783f 144 Pfam PF10952 Protein of unknown function (DUF2753) 5 144 2.8E-76 T 14-10-2018 IPR020206 Uncharacterised protein family, VP2110 DA442_11805 f6052482c0bd65097e9bdc0a4aff783f 144 ProDom PD087558 YRN2_VIBPA ORF2 VV1184 VV13101 MOTY 3'REGION VC1009 VP2110 1 143 3.0E-72 T 14-10-2018 IPR020206 Uncharacterised protein family, VP2110 DA442_08045 ec7bfaa00a37d74e5cfe0e34be8c15b0 592 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 439 472 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 DA442_08045 ec7bfaa00a37d74e5cfe0e34be8c15b0 592 PIRSF PIRSF036618 1 592 0.0 T 14-10-2018 IPR012182 Bifunctional molybdenum cofactor biosynthesis MobB/MoeA DA442_08045 ec7bfaa00a37d74e5cfe0e34be8c15b0 592 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 9 142 8.6E-49 T 14-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 DA442_08045 ec7bfaa00a37d74e5cfe0e34be8c15b0 592 Gene3D G3DSA:2.170.190.11 236 327 6.0E-136 T 14-10-2018 DA442_08045 ec7bfaa00a37d74e5cfe0e34be8c15b0 592 Pfam PF03454 MoeA C-terminal region (domain IV) 517 588 9.0E-21 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DA442_08045 ec7bfaa00a37d74e5cfe0e34be8c15b0 592 SUPERFAMILY SSF53218 363 508 1.44E-43 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily DA442_08045 ec7bfaa00a37d74e5cfe0e34be8c15b0 592 SUPERFAMILY SSF52540 7 169 2.08E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_08045 ec7bfaa00a37d74e5cfe0e34be8c15b0 592 Gene3D G3DSA:3.40.980.10 361 512 6.0E-136 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily DA442_08045 ec7bfaa00a37d74e5cfe0e34be8c15b0 592 Gene3D G3DSA:2.20.25.120 53 85 7.0E-57 T 14-10-2018 DA442_08045 ec7bfaa00a37d74e5cfe0e34be8c15b0 592 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 362 499 1.5E-31 T 14-10-2018 IPR001453 MoaB/Mog domain DA442_08045 ec7bfaa00a37d74e5cfe0e34be8c15b0 592 SUPERFAMILY SSF63882 192 362 3.01E-47 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DA442_08045 ec7bfaa00a37d74e5cfe0e34be8c15b0 592 Gene3D G3DSA:3.90.105.10 213 360 6.0E-136 T 14-10-2018 DA442_08045 ec7bfaa00a37d74e5cfe0e34be8c15b0 592 SUPERFAMILY SSF63867 512 590 4.19E-23 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DA442_08045 ec7bfaa00a37d74e5cfe0e34be8c15b0 592 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 9 167 9.6E-44 T 14-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 DA442_08045 ec7bfaa00a37d74e5cfe0e34be8c15b0 592 Gene3D G3DSA:2.40.340.10 513 583 6.0E-136 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DA442_08045 ec7bfaa00a37d74e5cfe0e34be8c15b0 592 Gene3D G3DSA:3.40.50.300 10 165 7.0E-57 T 14-10-2018 DA442_08045 ec7bfaa00a37d74e5cfe0e34be8c15b0 592 Pfam PF00994 Probable molybdopterin binding domain 366 503 1.4E-25 T 14-10-2018 IPR001453 MoaB/Mog domain DA442_08045 ec7bfaa00a37d74e5cfe0e34be8c15b0 592 Pfam PF03453 MoeA N-terminal region (domain I and II) 198 353 2.4E-38 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DA442_08045 ec7bfaa00a37d74e5cfe0e34be8c15b0 592 SMART SM00852 366 503 5.9E-40 T 14-10-2018 IPR001453 MoaB/Mog domain DA442_18940 41e0d52d301eb2c4072e06663d5bb087 376 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 298 305 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site DA442_18940 41e0d52d301eb2c4072e06663d5bb087 376 Gene3D G3DSA:3.30.1340.10 289 374 2.7E-27 T 14-10-2018 IPR035895 HPr-like superfamily DA442_18940 41e0d52d301eb2c4072e06663d5bb087 376 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 4 139 5.6E-34 T 14-10-2018 IPR002178 PTS EIIA type-2 domain DA442_18940 41e0d52d301eb2c4072e06663d5bb087 376 Pfam PF00381 PTS HPr component phosphorylation site 291 369 1.9E-25 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DA442_18940 41e0d52d301eb2c4072e06663d5bb087 376 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 290 369 6.2E-23 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DA442_18940 41e0d52d301eb2c4072e06663d5bb087 376 SUPERFAMILY SSF55594 291 375 7.07E-24 T 14-10-2018 IPR035895 HPr-like superfamily DA442_18940 41e0d52d301eb2c4072e06663d5bb087 376 SUPERFAMILY SSF55804 145 276 9.03E-19 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DA442_18940 41e0d52d301eb2c4072e06663d5bb087 376 PRINTS PR00107 Phosphocarrier protein signature 298 314 5.3E-19 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DA442_18940 41e0d52d301eb2c4072e06663d5bb087 376 PRINTS PR00107 Phosphocarrier protein signature 326 341 5.3E-19 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DA442_18940 41e0d52d301eb2c4072e06663d5bb087 376 PRINTS PR00107 Phosphocarrier protein signature 341 358 5.3E-19 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DA442_18940 41e0d52d301eb2c4072e06663d5bb087 376 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 327 342 - T 14-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site DA442_18940 41e0d52d301eb2c4072e06663d5bb087 376 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain DA442_18940 41e0d52d301eb2c4072e06663d5bb087 376 SUPERFAMILY SSF55804 4 140 9.81E-39 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DA442_18940 41e0d52d301eb2c4072e06663d5bb087 376 Gene3D G3DSA:3.40.930.10 1 142 2.3E-40 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DA442_18940 41e0d52d301eb2c4072e06663d5bb087 376 Gene3D G3DSA:3.40.930.10 146 277 5.8E-6 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DA442_18270 3101e09cd85446aff714e8d0ebf0c8a1 515 Gene3D G3DSA:3.30.1120.10 395 453 1.0E-96 T 14-10-2018 DA442_18270 3101e09cd85446aff714e8d0ebf0c8a1 515 Pfam PF00884 Sulfatase 27 351 7.8E-60 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 DA442_18270 3101e09cd85446aff714e8d0ebf0c8a1 515 SUPERFAMILY SSF53649 23 500 3.93E-122 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DA442_18270 3101e09cd85446aff714e8d0ebf0c8a1 515 Gene3D G3DSA:3.40.720.10 27 394 1.0E-96 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DA442_13895 d081880ea17bbe0295850cc9f806e1b0 905 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 2.4E-8 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal DA442_13895 d081880ea17bbe0295850cc9f806e1b0 905 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 330 379 5.8E-14 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal DA442_13895 d081880ea17bbe0295850cc9f806e1b0 905 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 62 100 7.3E-16 T 14-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial DA442_13895 d081880ea17bbe0295850cc9f806e1b0 905 SUPERFAMILY SSF50447 578 659 1.93E-23 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DA442_13895 d081880ea17bbe0295850cc9f806e1b0 905 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 408 562 7.7E-34 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DA442_13895 d081880ea17bbe0295850cc9f806e1b0 905 Gene3D G3DSA:3.40.50.10050 699 805 3.7E-38 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily DA442_13895 d081880ea17bbe0295850cc9f806e1b0 905 Pfam PF11987 Translation-initiation factor 2 689 794 1.3E-37 T 14-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 DA442_13895 d081880ea17bbe0295850cc9f806e1b0 905 Pfam PF00009 Elongation factor Tu GTP binding domain 408 564 3.5E-32 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_13895 d081880ea17bbe0295850cc9f806e1b0 905 SUPERFAMILY SSF50447 806 902 1.59E-34 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DA442_13895 d081880ea17bbe0295850cc9f806e1b0 905 SUPERFAMILY SSF52156 682 811 8.24E-39 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily DA442_13895 d081880ea17bbe0295850cc9f806e1b0 905 SUPERFAMILY SSF46955 3 50 3.11E-12 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DA442_13895 d081880ea17bbe0295850cc9f806e1b0 905 SUPERFAMILY SSF52540 403 569 6.19E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_13895 d081880ea17bbe0295850cc9f806e1b0 905 Gene3D G3DSA:3.40.50.300 402 575 6.0E-70 T 14-10-2018 DA442_13895 d081880ea17bbe0295850cc9f806e1b0 905 ProSitePatterns PS01176 Initiation factor 2 signature. 855 877 - T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 DA442_13895 d081880ea17bbe0295850cc9f806e1b0 905 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 902 17.648 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 DA442_13895 d081880ea17bbe0295850cc9f806e1b0 905 Gene3D G3DSA:2.40.30.10 576 694 4.2E-40 T 14-10-2018 DA442_13895 d081880ea17bbe0295850cc9f806e1b0 905 Gene3D G3DSA:2.40.30.10 806 903 1.7E-34 T 14-10-2018 DA442_13895 d081880ea17bbe0295850cc9f806e1b0 905 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 322 904 1.8E-285 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 DA442_13895 d081880ea17bbe0295850cc9f806e1b0 905 Gene3D G3DSA:3.30.56.50 2 50 3.2E-23 T 14-10-2018 DA442_25445 54f2be0020bd15e72cadc0e4bfe4c52e 721 SUPERFAMILY SSF48113 432 721 5.75E-111 T 14-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 DA442_25445 54f2be0020bd15e72cadc0e4bfe4c52e 721 Pfam PF00141 Peroxidase 404 698 3.8E-37 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 DA442_25445 54f2be0020bd15e72cadc0e4bfe4c52e 721 Pfam PF00141 Peroxidase 80 397 3.4E-50 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 DA442_25445 54f2be0020bd15e72cadc0e4bfe4c52e 721 Gene3D G3DSA:1.10.520.10 28 432 9.5E-215 T 14-10-2018 DA442_25445 54f2be0020bd15e72cadc0e4bfe4c52e 721 ProSitePatterns PS00436 Peroxidases active site signature. 90 101 - T 14-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 DA442_25445 54f2be0020bd15e72cadc0e4bfe4c52e 721 Gene3D G3DSA:1.10.420.20 191 397 9.5E-215 T 14-10-2018 DA442_25445 54f2be0020bd15e72cadc0e4bfe4c52e 721 PRINTS PR00458 Haem peroxidase superfamily signature 90 104 3.6E-18 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 DA442_25445 54f2be0020bd15e72cadc0e4bfe4c52e 721 PRINTS PR00458 Haem peroxidase superfamily signature 318 333 3.6E-18 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 DA442_25445 54f2be0020bd15e72cadc0e4bfe4c52e 721 PRINTS PR00458 Haem peroxidase superfamily signature 150 167 3.6E-18 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 DA442_25445 54f2be0020bd15e72cadc0e4bfe4c52e 721 PRINTS PR00458 Haem peroxidase superfamily signature 168 180 3.6E-18 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 DA442_25445 54f2be0020bd15e72cadc0e4bfe4c52e 721 PRINTS PR00458 Haem peroxidase superfamily signature 259 274 3.6E-18 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 DA442_25445 54f2be0020bd15e72cadc0e4bfe4c52e 721 Hamap MF_01961 Catalase-peroxidase [katG]. 7 721 39.139 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 DA442_25445 54f2be0020bd15e72cadc0e4bfe4c52e 721 Gene3D G3DSA:1.10.520.10 433 721 3.2E-144 T 14-10-2018 DA442_25445 54f2be0020bd15e72cadc0e4bfe4c52e 721 SUPERFAMILY SSF48113 19 431 5.6E-150 T 14-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 DA442_25445 54f2be0020bd15e72cadc0e4bfe4c52e 721 Gene3D G3DSA:1.10.420.10 578 699 3.2E-144 T 14-10-2018 DA442_25445 54f2be0020bd15e72cadc0e4bfe4c52e 721 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 52 65 2.3E-52 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 DA442_25445 54f2be0020bd15e72cadc0e4bfe4c52e 721 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 67 92 2.3E-52 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 DA442_25445 54f2be0020bd15e72cadc0e4bfe4c52e 721 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 478 504 2.3E-52 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 DA442_25445 54f2be0020bd15e72cadc0e4bfe4c52e 721 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 267 290 2.3E-52 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 DA442_25445 54f2be0020bd15e72cadc0e4bfe4c52e 721 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 26 48 2.3E-52 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 DA442_25445 54f2be0020bd15e72cadc0e4bfe4c52e 721 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 11 721 0.0 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 DA442_20670 8e4eccf900c1dcb08219d4b909cb8911 513 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 14 213 1.3E-52 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 DA442_20670 8e4eccf900c1dcb08219d4b909cb8911 513 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 446 456 - T 14-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site DA442_20670 8e4eccf900c1dcb08219d4b909cb8911 513 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 11 214 23.238 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 DA442_20670 8e4eccf900c1dcb08219d4b909cb8911 513 PIRSF PIRSF017184 7 512 1.2E-131 T 14-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 DA442_20670 8e4eccf900c1dcb08219d4b909cb8911 513 Pfam PF01256 Carbohydrate kinase 253 502 1.8E-56 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 DA442_20670 8e4eccf900c1dcb08219d4b909cb8911 513 Gene3D G3DSA:3.40.1190.20 224 508 1.8E-80 T 14-10-2018 IPR029056 Ribokinase-like DA442_20670 8e4eccf900c1dcb08219d4b909cb8911 513 SUPERFAMILY SSF53613 230 505 8.86E-72 T 14-10-2018 IPR029056 Ribokinase-like DA442_20670 8e4eccf900c1dcb08219d4b909cb8911 513 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 229 511 21.671 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 DA442_20670 8e4eccf900c1dcb08219d4b909cb8911 513 SUPERFAMILY SSF64153 8 250 6.28E-64 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 DA442_20670 8e4eccf900c1dcb08219d4b909cb8911 513 Gene3D G3DSA:3.40.50.10260 6 218 4.3E-58 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 DA442_20670 8e4eccf900c1dcb08219d4b909cb8911 513 Pfam PF03853 YjeF-related protein N-terminus 32 193 4.8E-44 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 DA442_20670 8e4eccf900c1dcb08219d4b909cb8911 513 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 235 505 3.5E-62 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 DA442_06940 917526ba791792884a8e9aa489fdad86 222 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 6 220 2.3E-82 T 14-10-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-204174|Reactome: R-HSA-71182 DA442_06940 917526ba791792884a8e9aa489fdad86 222 Pfam PF00043 Glutathione S-transferase, C-terminal domain 144 207 1.1E-4 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal DA442_06940 917526ba791792884a8e9aa489fdad86 222 SUPERFAMILY SSF52833 5 89 3.01E-20 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_06940 917526ba791792884a8e9aa489fdad86 222 Pfam PF13417 Glutathione S-transferase, N-terminal domain 7 84 1.8E-14 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DA442_06940 917526ba791792884a8e9aa489fdad86 222 Gene3D G3DSA:3.40.30.10 7 83 8.2E-24 T 14-10-2018 DA442_06940 917526ba791792884a8e9aa489fdad86 222 SUPERFAMILY SSF47616 88 220 2.03E-26 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DA442_06940 917526ba791792884a8e9aa489fdad86 222 Gene3D G3DSA:1.20.1050.10 89 222 9.3E-46 T 14-10-2018 DA442_14360 b228e53c2363539f52bff388ce5ead72 85 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 5 82 1.5E-21 T 14-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 DA442_14360 b228e53c2363539f52bff388ce5ead72 85 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 85 35.697 T 14-10-2018 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3 DA442_14360 b228e53c2363539f52bff388ce5ead72 85 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 10 80 1.8E-19 T 14-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 DA442_13965 2fb9daf3f4f49e68d3f91a749b25ab44 473 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 30 449 5.2E-101 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DA442_13965 2fb9daf3f4f49e68d3f91a749b25ab44 473 Gene3D G3DSA:3.50.80.20 80 173 1.3E-11 T 14-10-2018 DA442_13965 2fb9daf3f4f49e68d3f91a749b25ab44 473 SUPERFAMILY SSF56601 52 456 1.69E-85 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DA442_13965 2fb9daf3f4f49e68d3f91a749b25ab44 473 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 52 435 9.3E-103 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DA442_13965 2fb9daf3f4f49e68d3f91a749b25ab44 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 412 425 1.4E-29 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DA442_13965 2fb9daf3f4f49e68d3f91a749b25ab44 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 333 347 1.4E-29 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DA442_13965 2fb9daf3f4f49e68d3f91a749b25ab44 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 56 75 1.4E-29 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DA442_13965 2fb9daf3f4f49e68d3f91a749b25ab44 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 274 296 1.4E-29 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DA442_13965 2fb9daf3f4f49e68d3f91a749b25ab44 473 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 348 362 1.4E-29 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DA442_13965 2fb9daf3f4f49e68d3f91a749b25ab44 473 Gene3D G3DSA:3.40.710.10 244 466 8.4E-54 T 14-10-2018 DA442_04570 c7095f7048b2761682a48491c6291eaf 220 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 5 218 5.2E-78 T 14-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 DA442_04570 c7095f7048b2761682a48491c6291eaf 220 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 4 219 28.089 T 14-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 DA442_04570 c7095f7048b2761682a48491c6291eaf 220 SUPERFAMILY SSF63848 113 216 9.68E-30 T 14-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 DA442_04570 c7095f7048b2761682a48491c6291eaf 220 Gene3D G3DSA:2.160.20.70 113 219 8.3E-31 T 14-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 DA442_04570 c7095f7048b2761682a48491c6291eaf 220 Gene3D G3DSA:3.30.750.120 2 112 2.1E-33 T 14-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily DA442_04570 c7095f7048b2761682a48491c6291eaf 220 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 115 215 3.5E-32 T 14-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 DA442_04570 c7095f7048b2761682a48491c6291eaf 220 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 102 4.5E-30 T 14-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 DA442_07570 c2f2134966507a2aea63b092832daf5f 168 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 6 157 9.4E-59 T 14-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 DA442_07570 c2f2134966507a2aea63b092832daf5f 168 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 4 157 2.8E-56 T 14-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 DA442_07570 c2f2134966507a2aea63b092832daf5f 168 PIRSF PIRSF028301 1 168 3.1E-63 T 14-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 DA442_05135 b7ee33792b169b74c1dd025f253e30e3 752 Pfam PF00753 Metallo-beta-lactamase superfamily 504 679 1.3E-11 T 14-10-2018 IPR001279 Metallo-beta-lactamase DA442_05135 b7ee33792b169b74c1dd025f253e30e3 752 SMART SM00849 506 689 7.8E-11 T 14-10-2018 IPR001279 Metallo-beta-lactamase DA442_05135 b7ee33792b169b74c1dd025f253e30e3 752 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 230 406 1.9E-28 T 14-10-2018 IPR004477 ComEC/Rec2-related protein DA442_05135 b7ee33792b169b74c1dd025f253e30e3 752 Pfam PF03772 Competence protein 208 466 5.8E-52 T 14-10-2018 IPR004477 ComEC/Rec2-related protein DA442_05135 b7ee33792b169b74c1dd025f253e30e3 752 Gene3D G3DSA:3.60.15.10 494 732 2.5E-45 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DA442_05135 b7ee33792b169b74c1dd025f253e30e3 752 SUPERFAMILY SSF56281 494 741 6.09E-43 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DA442_05135 b7ee33792b169b74c1dd025f253e30e3 752 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 137 718 2.8E-118 T 14-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 DA442_05875 99eb83aa79bcbac7163406093c3ba22f 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 44.905 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 DA442_05875 99eb83aa79bcbac7163406093c3ba22f 257 Pfam PF00977 Histidine biosynthesis protein 5 239 2.2E-79 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 DA442_05875 99eb83aa79bcbac7163406093c3ba22f 257 Gene3D G3DSA:3.20.20.70 1 257 2.7E-95 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_05875 99eb83aa79bcbac7163406093c3ba22f 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 1.6E-114 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 DA442_05875 99eb83aa79bcbac7163406093c3ba22f 257 SUPERFAMILY SSF51366 1 256 1.1E-74 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DA442_13040 b35d869019f41478bd6f70840947ac85 403 Gene3D G3DSA:3.90.1150.10 7 395 7.0E-162 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DA442_13040 b35d869019f41478bd6f70840947ac85 403 SUPERFAMILY SSF53383 2 400 1.61E-124 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_13040 b35d869019f41478bd6f70840947ac85 403 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 6 401 2.6E-166 T 14-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 DA442_13040 b35d869019f41478bd6f70840947ac85 403 Gene3D G3DSA:3.40.640.10 35 295 7.0E-162 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_13040 b35d869019f41478bd6f70840947ac85 403 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 216 235 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site DA442_13040 b35d869019f41478bd6f70840947ac85 403 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 2 403 2.2E-157 T 14-10-2018 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 DA442_13040 b35d869019f41478bd6f70840947ac85 403 Pfam PF00266 Aminotransferase class-V 24 392 8.2E-150 T 14-10-2018 IPR000192 Aminotransferase class V domain DA442_13040 b35d869019f41478bd6f70840947ac85 403 PIRSF PIRSF005572 21 403 1.6E-51 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 DA442_24720 4b70ee1d1a468e321ddec59ebd32ece5 466 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 374 457 4.4E-33 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 DA442_24720 4b70ee1d1a468e321ddec59ebd32ece5 466 SUPERFAMILY SSF52794 372 465 2.75E-29 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DA442_24720 4b70ee1d1a468e321ddec59ebd32ece5 466 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 375 465 4.6E-17 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DA442_24720 4b70ee1d1a468e321ddec59ebd32ece5 466 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 11 341 9.7E-76 T 14-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 DA442_24720 4b70ee1d1a468e321ddec59ebd32ece5 466 Gene3D G3DSA:3.40.50.2300 366 466 1.1E-34 T 14-10-2018 DA442_08250 a14767708335afdb128dbd5496ce4387 54 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 7.5E-21 T 14-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type DA442_08250 a14767708335afdb128dbd5496ce4387 54 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 50 2.0E-17 T 14-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type DA442_04330 7d0d1d5b687414fd5ddc4abb98955b0a 166 SMART SM00738 1 101 1.5E-27 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DA442_04330 7d0d1d5b687414fd5ddc4abb98955b0a 166 Pfam PF02357 Transcription termination factor nusG 2 94 3.0E-20 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DA442_04330 7d0d1d5b687414fd5ddc4abb98955b0a 166 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 166 47.907 T 14-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 DA442_04330 7d0d1d5b687414fd5ddc4abb98955b0a 166 SUPERFAMILY SSF50104 115 163 6.22E-6 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily DA442_04330 7d0d1d5b687414fd5ddc4abb98955b0a 166 SUPERFAMILY SSF82679 1 101 3.92E-29 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DA442_04330 7d0d1d5b687414fd5ddc4abb98955b0a 166 Gene3D G3DSA:3.30.70.940 1 165 1.2E-53 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DA442_04330 7d0d1d5b687414fd5ddc4abb98955b0a 166 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 163 1.2E-62 T 14-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 DA442_24660 26d96821333293d784864699fbca673f 296 Gene3D G3DSA:3.40.190.10 158 252 1.3E-35 T 14-10-2018 DA442_24660 26d96821333293d784864699fbca673f 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 9.3E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_24660 26d96821333293d784864699fbca673f 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 5.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_24660 26d96821333293d784864699fbca673f 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 5.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_24660 26d96821333293d784864699fbca673f 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 5.4E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_24660 26d96821333293d784864699fbca673f 296 SUPERFAMILY SSF53850 86 281 3.44E-17 T 14-10-2018 DA442_24660 26d96821333293d784864699fbca673f 296 SUPERFAMILY SSF46785 3 81 7.07E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_24660 26d96821333293d784864699fbca673f 296 Gene3D G3DSA:1.10.10.10 1 92 4.2E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_24660 26d96821333293d784864699fbca673f 296 Pfam PF03466 LysR substrate binding domain 85 280 3.4E-15 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_24660 26d96821333293d784864699fbca673f 296 Gene3D G3DSA:3.40.190.10 98 277 1.3E-35 T 14-10-2018 DA442_19565 b78bb0344f01df6d307a561a6f7242bc 293 Gene3D G3DSA:3.60.10.10 20 291 7.9E-29 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DA442_19565 b78bb0344f01df6d307a561a6f7242bc 293 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 31 283 6.5E-8 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase DA442_19565 b78bb0344f01df6d307a561a6f7242bc 293 SUPERFAMILY SSF56219 20 292 1.57E-28 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DA442_14560 234dedc897424e6bf3a758c4f2f2dfeb 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 306.194 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 DA442_14560 234dedc897424e6bf3a758c4f2f2dfeb 597 Gene3D G3DSA:3.40.50.300 1 185 1.4E-70 T 14-10-2018 DA442_14560 234dedc897424e6bf3a758c4f2f2dfeb 597 Gene3D G3DSA:3.30.70.2570 479 553 7.2E-33 T 14-10-2018 IPR038363 LepA, C-terminal domain superfamily DA442_14560 234dedc897424e6bf3a758c4f2f2dfeb 597 Gene3D G3DSA:2.40.30.10 186 285 1.7E-34 T 14-10-2018 DA442_14560 234dedc897424e6bf3a758c4f2f2dfeb 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 3.3E-49 T 14-10-2018 IPR013842 GTP-binding protein LepA, C-terminal DA442_14560 234dedc897424e6bf3a758c4f2f2dfeb 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site DA442_14560 234dedc897424e6bf3a758c4f2f2dfeb 597 SUPERFAMILY SSF52540 2 205 2.31E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_14560 234dedc897424e6bf3a758c4f2f2dfeb 597 SMART SM00838 398 486 0.0049 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like DA442_14560 234dedc897424e6bf3a758c4f2f2dfeb 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 176 1.1E-16 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DA442_14560 234dedc897424e6bf3a758c4f2f2dfeb 597 Gene3D G3DSA:3.30.70.3380 368 478 3.6E-39 T 14-10-2018 DA442_14560 234dedc897424e6bf3a758c4f2f2dfeb 597 Pfam PF00679 Elongation factor G C-terminus 399 482 1.5E-19 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like DA442_14560 234dedc897424e6bf3a758c4f2f2dfeb 597 SUPERFAMILY SSF54980 399 493 3.41E-24 T 14-10-2018 IPR035647 EF-G domain III/V-like DA442_14560 234dedc897424e6bf3a758c4f2f2dfeb 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 1.1E-9 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DA442_14560 234dedc897424e6bf3a758c4f2f2dfeb 597 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 1.9E-300 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 DA442_14560 234dedc897424e6bf3a758c4f2f2dfeb 597 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 1.5E-52 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_14560 234dedc897424e6bf3a758c4f2f2dfeb 597 SUPERFAMILY SSF54980 292 370 1.8E-18 T 14-10-2018 IPR035647 EF-G domain III/V-like DA442_14560 234dedc897424e6bf3a758c4f2f2dfeb 597 SUPERFAMILY SSF50447 165 288 1.48E-29 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DA442_14560 234dedc897424e6bf3a758c4f2f2dfeb 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 4.0E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_14560 234dedc897424e6bf3a758c4f2f2dfeb 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 4.0E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_14560 234dedc897424e6bf3a758c4f2f2dfeb 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 4.0E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_14560 234dedc897424e6bf3a758c4f2f2dfeb 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 4.0E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_14560 234dedc897424e6bf3a758c4f2f2dfeb 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 4.0E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_14560 234dedc897424e6bf3a758c4f2f2dfeb 597 Gene3D G3DSA:3.30.70.870 286 367 1.3E-35 T 14-10-2018 DA442_16930 edbccb75906605768b2591213ae91b6f 516 PIRSF PIRSF028175 1 516 0.0 T 14-10-2018 IPR014540 Uncharacterised conserved protein UCP028175 DA442_20485 fee77863ac2b3fba6007b97f92e8787b 389 SUPERFAMILY SSF56645 6 249 3.93E-85 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DA442_20485 fee77863ac2b3fba6007b97f92e8787b 389 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 224 4.9E-26 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 DA442_20485 fee77863ac2b3fba6007b97f92e8787b 389 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 343 362 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 DA442_20485 fee77863ac2b3fba6007b97f92e8787b 389 Gene3D G3DSA:1.20.140.10 242 389 1.5E-47 T 14-10-2018 DA442_20485 fee77863ac2b3fba6007b97f92e8787b 389 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 14 125 5.1E-36 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 DA442_20485 fee77863ac2b3fba6007b97f92e8787b 389 PIRSF PIRSF016578 143 389 6.9E-10 T 14-10-2018 DA442_20485 fee77863ac2b3fba6007b97f92e8787b 389 PIRSF PIRSF016578 8 111 0.018 T 14-10-2018 DA442_20485 fee77863ac2b3fba6007b97f92e8787b 389 Gene3D G3DSA:1.10.540.10 2 127 2.0E-44 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DA442_20485 fee77863ac2b3fba6007b97f92e8787b 389 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 384 2.6E-43 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 DA442_20485 fee77863ac2b3fba6007b97f92e8787b 389 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 131 143 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 DA442_20485 fee77863ac2b3fba6007b97f92e8787b 389 Gene3D G3DSA:2.40.110.10 128 241 2.9E-46 T 14-10-2018 DA442_20485 fee77863ac2b3fba6007b97f92e8787b 389 SUPERFAMILY SSF47203 234 387 3.54E-48 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DA442_01870 915c2781898316872428fdf7e6e4bd83 265 Gene3D G3DSA:2.30.30.40 127 185 5.5E-11 T 14-10-2018 DA442_01870 915c2781898316872428fdf7e6e4bd83 265 Pfam PF08239 Bacterial SH3 domain 132 184 1.1E-12 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type DA442_21195 75e5c1de6c929d2490d429f31d154b8a 148 Pfam PF11911 Protein of unknown function (DUF3429) 7 146 2.3E-26 T 14-10-2018 IPR021836 Protein of unknown function DUF3429 DA442_22345 b6beeff729fdf545ae2e8f210839ce44 254 Gene3D G3DSA:2.40.30.10 2 102 1.0E-23 T 14-10-2018 DA442_22345 b6beeff729fdf545ae2e8f210839ce44 254 SUPERFAMILY SSF63380 10 100 4.48E-18 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DA442_22345 b6beeff729fdf545ae2e8f210839ce44 254 Gene3D G3DSA:3.40.50.80 104 254 7.1E-38 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DA442_22345 b6beeff729fdf545ae2e8f210839ce44 254 PRINTS PR00410 Phenol hydroxylase reductase family signature 117 136 7.2E-5 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DA442_22345 b6beeff729fdf545ae2e8f210839ce44 254 PRINTS PR00410 Phenol hydroxylase reductase family signature 142 151 7.2E-5 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DA442_22345 b6beeff729fdf545ae2e8f210839ce44 254 PRINTS PR00410 Phenol hydroxylase reductase family signature 34 46 7.2E-5 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DA442_22345 b6beeff729fdf545ae2e8f210839ce44 254 PRINTS PR00410 Phenol hydroxylase reductase family signature 215 223 7.2E-5 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DA442_22345 b6beeff729fdf545ae2e8f210839ce44 254 SUPERFAMILY SSF52343 112 253 5.76E-36 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DA442_22345 b6beeff729fdf545ae2e8f210839ce44 254 Pfam PF00175 Oxidoreductase NAD-binding domain 118 228 3.3E-16 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 DA442_22345 b6beeff729fdf545ae2e8f210839ce44 254 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 117 136 9.7E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DA442_22345 b6beeff729fdf545ae2e8f210839ce44 254 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 142 151 9.7E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DA442_22345 b6beeff729fdf545ae2e8f210839ce44 254 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 215 223 9.7E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DA442_22345 b6beeff729fdf545ae2e8f210839ce44 254 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 54 61 9.7E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DA442_22345 b6beeff729fdf545ae2e8f210839ce44 254 Pfam PF00970 Oxidoreductase FAD-binding domain 21 95 7.5E-7 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 DA442_15590 b3be7139d510eaa8c961d87e592146d2 279 SUPERFAMILY SSF53335 5 268 7.75E-76 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_15590 b3be7139d510eaa8c961d87e592146d2 279 PIRSF PIRSF000398 1 274 1.5E-72 T 14-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 DA442_15590 b3be7139d510eaa8c961d87e592146d2 279 Gene3D G3DSA:1.10.1020.10 57 156 1.8E-83 T 14-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 DA442_15590 b3be7139d510eaa8c961d87e592146d2 279 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 252 2.3E-67 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DA442_15590 b3be7139d510eaa8c961d87e592146d2 279 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 268 2.5E-94 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DA442_15590 b3be7139d510eaa8c961d87e592146d2 279 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DA442_15590 b3be7139d510eaa8c961d87e592146d2 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 3.9E-18 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DA442_15590 b3be7139d510eaa8c961d87e592146d2 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 3.9E-18 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DA442_15590 b3be7139d510eaa8c961d87e592146d2 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 3.9E-18 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DA442_15590 b3be7139d510eaa8c961d87e592146d2 279 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 3.9E-18 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DA442_15590 b3be7139d510eaa8c961d87e592146d2 279 Gene3D G3DSA:3.40.50.150 7 239 1.8E-83 T 14-10-2018 DA442_12925 8868872677cfdc67dcbbe6170e95ba28 77 Gene3D G3DSA:1.10.10.1130 1 77 3.2E-30 T 14-10-2018 DA442_12925 8868872677cfdc67dcbbe6170e95ba28 77 Pfam PF10982 Protein of unknown function (DUF2789) 1 75 4.8E-30 T 14-10-2018 IPR021250 Protein of unknown function DUF2789 DA442_05220 67596256bd4ce51348d31afd79e48af0 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_05220 67596256bd4ce51348d31afd79e48af0 256 SUPERFAMILY SSF52540 7 251 2.6E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_05220 67596256bd4ce51348d31afd79e48af0 256 SMART SM00382 31 229 1.1E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_05220 67596256bd4ce51348d31afd79e48af0 256 Pfam PF00005 ABC transporter 22 181 7.1E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_05220 67596256bd4ce51348d31afd79e48af0 256 PIRSF PIRSF039085 3 256 1.4E-116 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 DA442_05220 67596256bd4ce51348d31afd79e48af0 256 Gene3D G3DSA:3.40.50.300 4 255 3.1E-74 T 14-10-2018 DA442_04650 3a65003ec92b1a2d60e7248cd947d2a2 517 Gene3D G3DSA:1.20.200.10 204 511 1.6E-101 T 14-10-2018 DA442_04650 3a65003ec92b1a2d60e7248cd947d2a2 517 Pfam PF00221 Aromatic amino acid lyase 16 469 1.4E-164 T 14-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 DA442_04650 3a65003ec92b1a2d60e7248cd947d2a2 517 Gene3D G3DSA:1.10.275.10 9 203 6.6E-58 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal DA442_04650 3a65003ec92b1a2d60e7248cd947d2a2 517 SUPERFAMILY SSF48557 5 513 7.85E-173 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 DA442_04650 3a65003ec92b1a2d60e7248cd947d2a2 517 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 145 161 - T 14-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 DA442_19675 dc515ee8b1c8d876ebb04256073c210a 386 Gene3D G3DSA:1.20.1250.20 13 194 4.4E-17 T 14-10-2018 DA442_19675 dc515ee8b1c8d876ebb04256073c210a 386 Gene3D G3DSA:1.20.1250.20 202 383 9.4E-10 T 14-10-2018 DA442_19675 dc515ee8b1c8d876ebb04256073c210a 386 Pfam PF07690 Major Facilitator Superfamily 19 343 1.3E-23 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DA442_19675 dc515ee8b1c8d876ebb04256073c210a 386 SUPERFAMILY SSF103473 18 376 4.19E-34 T 14-10-2018 IPR036259 MFS transporter superfamily DA442_20040 86bbed84c2068905967fb866e355907a 1172 Pfam PF14331 ImcF-related N-terminal domain 193 450 5.4E-87 T 14-10-2018 IPR025743 ImcF-related, N-terminal domain DA442_20040 86bbed84c2068905967fb866e355907a 1172 SUPERFAMILY SSF52540 106 292 8.95E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_20040 86bbed84c2068905967fb866e355907a 1172 Pfam PF06744 Type VI secretion protein IcmF C-terminal 927 1120 5.9E-59 T 14-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal DA442_20040 86bbed84c2068905967fb866e355907a 1172 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 17 1170 0.0 T 14-10-2018 IPR017731 Type VI secretion system, IcmF DA442_20040 86bbed84c2068905967fb866e355907a 1172 Gene3D G3DSA:3.40.50.300 103 308 2.0E-5 T 14-10-2018 DA442_20040 86bbed84c2068905967fb866e355907a 1172 Pfam PF06761 Intracellular multiplication and human macrophage-killing 504 803 9.2E-76 T 14-10-2018 IPR009612 ImcF-related DA442_01875 4eef2aa0f9fb41faac1b72ae52b936fc 182 Gene3D G3DSA:1.20.144.10 96 181 1.2E-18 T 14-10-2018 DA442_01875 4eef2aa0f9fb41faac1b72ae52b936fc 182 SMART SM00014 71 177 3.2E-15 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DA442_01875 4eef2aa0f9fb41faac1b72ae52b936fc 182 Pfam PF01569 PAP2 superfamily 70 180 2.1E-19 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DA442_01875 4eef2aa0f9fb41faac1b72ae52b936fc 182 SUPERFAMILY SSF48317 12 179 8.37E-38 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily DA442_06110 3a67b918806860ce03b8b7406ff578fa 509 Gene3D G3DSA:1.10.8.60 365 430 2.7E-15 T 14-10-2018 DA442_06110 3a67b918806860ce03b8b7406ff578fa 509 SMART SM00065 21 170 1.6E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 DA442_06110 3a67b918806860ce03b8b7406ff578fa 509 Gene3D G3DSA:3.30.450.40 7 175 6.3E-15 T 14-10-2018 IPR029016 GAF-like domain superfamily DA442_06110 3a67b918806860ce03b8b7406ff578fa 509 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 218 231 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DA442_06110 3a67b918806860ce03b8b7406ff578fa 509 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 471 488 9.0E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DA442_06110 3a67b918806860ce03b8b7406ff578fa 509 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 488 508 9.0E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DA442_06110 3a67b918806860ce03b8b7406ff578fa 509 SMART SM00382 214 358 4.2E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_06110 3a67b918806860ce03b8b7406ff578fa 509 Gene3D G3DSA:1.10.10.60 448 509 5.2E-10 T 14-10-2018 DA442_06110 3a67b918806860ce03b8b7406ff578fa 509 Pfam PF00158 Sigma-54 interaction domain 195 361 1.6E-69 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DA442_06110 3a67b918806860ce03b8b7406ff578fa 509 Gene3D G3DSA:3.40.50.300 180 364 3.7E-64 T 14-10-2018 DA442_06110 3a67b918806860ce03b8b7406ff578fa 509 SUPERFAMILY SSF46689 459 507 9.41E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_06110 3a67b918806860ce03b8b7406ff578fa 509 Pfam PF02954 Bacterial regulatory protein, Fis family 469 500 4.8E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DA442_06110 3a67b918806860ce03b8b7406ff578fa 509 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 280 295 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DA442_06110 3a67b918806860ce03b8b7406ff578fa 509 SUPERFAMILY SSF52540 193 437 4.2E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_06110 3a67b918806860ce03b8b7406ff578fa 509 SUPERFAMILY SSF55781 7 163 3.93E-18 T 14-10-2018 DA442_21160 98cca796e1e83d74d207c6a3e1e33873 212 Pfam PF01966 HD domain 27 129 8.3E-14 T 14-10-2018 IPR006674 HD domain DA442_21160 98cca796e1e83d74d207c6a3e1e33873 212 Gene3D G3DSA:1.10.3210.50 3 212 5.9E-68 T 14-10-2018 DA442_21160 98cca796e1e83d74d207c6a3e1e33873 212 SMART SM00471 22 139 6.7E-7 T 14-10-2018 IPR003607 HD/PDEase domain DA442_21160 98cca796e1e83d74d207c6a3e1e33873 212 SUPERFAMILY SSF109604 7 210 2.86E-61 T 14-10-2018 DA442_08145 7cae0ef08bfeb2d32e623142cfdcc58b 1461 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 421 461 4.3E-5 T 14-10-2018 IPR006530 YD repeat DA442_08145 7cae0ef08bfeb2d32e623142cfdcc58b 1461 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 463 500 5.8E-6 T 14-10-2018 IPR006530 YD repeat DA442_08145 7cae0ef08bfeb2d32e623142cfdcc58b 1461 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 505 546 0.0028 T 14-10-2018 IPR006530 YD repeat DA442_08145 7cae0ef08bfeb2d32e623142cfdcc58b 1461 Gene3D G3DSA:3.90.930.1 414 571 1.5E-11 T 14-10-2018 DA442_08145 7cae0ef08bfeb2d32e623142cfdcc58b 1461 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1066 1130 4.6E-27 T 14-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 DA442_08145 7cae0ef08bfeb2d32e623142cfdcc58b 1461 Pfam PF03527 RHS protein 1029 1062 8.4E-13 T 14-10-2018 IPR001826 RHS protein DA442_08145 7cae0ef08bfeb2d32e623142cfdcc58b 1461 Pfam PF05593 RHS Repeat 422 447 3.1E-5 T 14-10-2018 IPR031325 RHS repeat DA442_08145 7cae0ef08bfeb2d32e623142cfdcc58b 1461 PRINTS PR00394 RHS protein signature 1099 1118 1.3E-11 T 14-10-2018 IPR001826 RHS protein DA442_08145 7cae0ef08bfeb2d32e623142cfdcc58b 1461 PRINTS PR00394 RHS protein signature 1076 1096 1.3E-11 T 14-10-2018 IPR001826 RHS protein DA442_08145 7cae0ef08bfeb2d32e623142cfdcc58b 1461 PRINTS PR00394 RHS protein signature 1023 1043 1.3E-11 T 14-10-2018 IPR001826 RHS protein DA442_08145 7cae0ef08bfeb2d32e623142cfdcc58b 1461 Gene3D G3DSA:2.180.10.10 688 1131 8.1E-40 T 14-10-2018 DA442_06655 33de7802bf1d85940c97890797747a3d 391 SUPERFAMILY SSF56059 111 313 1.94E-58 T 14-10-2018 DA442_06655 33de7802bf1d85940c97890797747a3d 391 Gene3D G3DSA:3.40.50.20 1 120 2.7E-53 T 14-10-2018 DA442_06655 33de7802bf1d85940c97890797747a3d 391 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 6 390 52.158 T 14-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 DA442_06655 33de7802bf1d85940c97890797747a3d 391 Gene3D G3DSA:3.30.470.20 195 389 1.2E-60 T 14-10-2018 DA442_06655 33de7802bf1d85940c97890797747a3d 391 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 12 389 4.3E-192 T 14-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 DA442_06655 33de7802bf1d85940c97890797747a3d 391 Gene3D G3DSA:3.30.1490.20 121 194 1.6E-34 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DA442_06655 33de7802bf1d85940c97890797747a3d 391 SUPERFAMILY SSF51246 317 389 5.18E-18 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 DA442_06655 33de7802bf1d85940c97890797747a3d 391 SUPERFAMILY SSF52440 2 110 3.45E-34 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DA442_06655 33de7802bf1d85940c97890797747a3d 391 Pfam PF02222 ATP-grasp domain 121 293 7.5E-59 T 14-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type DA442_19495 303fa512a365fef52ef52f7a062011f1 147 Pfam PF11269 Protein of unknown function (DUF3069) 24 143 2.2E-53 T 14-10-2018 IPR021422 Protein of unknown function DUF3069 DA442_19495 303fa512a365fef52ef52f7a062011f1 147 SUPERFAMILY SSF158675 1 144 1.83E-52 T 14-10-2018 IPR023132 Sama2622-like superfamily DA442_19495 303fa512a365fef52ef52f7a062011f1 147 Gene3D G3DSA:1.10.3440.10 2 144 5.0E-5 T 14-10-2018 IPR023132 Sama2622-like superfamily DA442_11430 a445cc2ef13eac95a38b5c4cf338a59f 339 SUPERFAMILY SSF52151 1 260 3.92E-25 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DA442_11430 a445cc2ef13eac95a38b5c4cf338a59f 339 Pfam PF01734 Patatin-like phospholipase 7 155 8.4E-12 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 DA442_11430 a445cc2ef13eac95a38b5c4cf338a59f 339 Gene3D G3DSA:3.40.1090.10 94 224 4.0E-6 T 14-10-2018 DA442_19685 c95848f63bdf1d04a9e67d82292e2410 461 Pfam PF01554 MatE 252 415 2.4E-17 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DA442_19685 c95848f63bdf1d04a9e67d82292e2410 461 Pfam PF01554 MatE 28 188 9.3E-26 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DA442_19685 c95848f63bdf1d04a9e67d82292e2410 461 TIGRFAM TIGR00797 matE: MATE efflux family protein 28 425 6.5E-55 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DA442_19685 c95848f63bdf1d04a9e67d82292e2410 461 PIRSF PIRSF006603 3 460 9.0E-64 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DA442_17130 3e991fcfc3fe66035b3d25059d264d77 586 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 52 578 1.6E-140 T 14-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 DA442_17130 3e991fcfc3fe66035b3d25059d264d77 586 SUPERFAMILY SSF56235 43 585 8.49E-178 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DA442_17130 3e991fcfc3fe66035b3d25059d264d77 586 Pfam PF01019 Gamma-glutamyltranspeptidase 66 581 1.4E-164 T 14-10-2018 DA442_17130 3e991fcfc3fe66035b3d25059d264d77 586 Gene3D G3DSA:1.10.246.130 284 406 2.0E-39 T 14-10-2018 DA442_17130 3e991fcfc3fe66035b3d25059d264d77 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 148 166 2.2E-67 T 14-10-2018 DA442_17130 3e991fcfc3fe66035b3d25059d264d77 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 298 317 2.2E-67 T 14-10-2018 DA442_17130 3e991fcfc3fe66035b3d25059d264d77 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 166 185 2.2E-67 T 14-10-2018 DA442_17130 3e991fcfc3fe66035b3d25059d264d77 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 429 447 2.2E-67 T 14-10-2018 DA442_17130 3e991fcfc3fe66035b3d25059d264d77 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 489 506 2.2E-67 T 14-10-2018 DA442_17130 3e991fcfc3fe66035b3d25059d264d77 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 268 284 2.2E-67 T 14-10-2018 DA442_17130 3e991fcfc3fe66035b3d25059d264d77 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 73 98 2.2E-67 T 14-10-2018 DA442_17130 3e991fcfc3fe66035b3d25059d264d77 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 407 425 2.2E-67 T 14-10-2018 DA442_17130 3e991fcfc3fe66035b3d25059d264d77 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 465 480 2.2E-67 T 14-10-2018 DA442_17130 3e991fcfc3fe66035b3d25059d264d77 586 Gene3D G3DSA:3.60.20.40 407 586 3.5E-59 T 14-10-2018 DA442_15145 04923b304af8ddd521895fbc91f73561 323 SUPERFAMILY SSF54631 262 320 5.65E-8 T 14-10-2018 DA442_15145 04923b304af8ddd521895fbc91f73561 323 PIRSF PIRSF004692 2 323 1.4E-132 T 14-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 DA442_15145 04923b304af8ddd521895fbc91f73561 323 SUPERFAMILY SSF53697 11 282 5.12E-69 T 14-10-2018 DA442_15145 04923b304af8ddd521895fbc91f73561 323 Gene3D G3DSA:3.10.580.10 196 320 8.1E-44 T 14-10-2018 DA442_15145 04923b304af8ddd521895fbc91f73561 323 Pfam PF01380 SIS domain 41 172 1.3E-32 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DA442_15145 04923b304af8ddd521895fbc91f73561 323 Pfam PF00571 CBS domain 268 320 1.1E-6 T 14-10-2018 IPR000644 CBS domain DA442_15145 04923b304af8ddd521895fbc91f73561 323 Pfam PF00571 CBS domain 211 258 1.3E-4 T 14-10-2018 IPR000644 CBS domain DA442_15145 04923b304af8ddd521895fbc91f73561 323 Gene3D G3DSA:3.40.50.10490 6 195 4.3E-65 T 14-10-2018 DA442_15145 04923b304af8ddd521895fbc91f73561 323 SMART SM00116 275 322 4.4 T 14-10-2018 IPR000644 CBS domain DA442_15145 04923b304af8ddd521895fbc91f73561 323 SMART SM00116 210 258 0.72 T 14-10-2018 IPR000644 CBS domain DA442_15145 04923b304af8ddd521895fbc91f73561 323 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 45 313 2.5E-112 T 14-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 DA442_05005 4a130da4a0b1bcb0909a916b1834b23e 244 SUPERFAMILY SSF75217 94 243 3.53E-34 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases DA442_05005 4a130da4a0b1bcb0909a916b1834b23e 244 Pfam PF00588 SpoU rRNA Methylase family 102 236 1.8E-29 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 DA442_05005 4a130da4a0b1bcb0909a916b1834b23e 244 Gene3D G3DSA:3.30.1330.30 1 94 7.2E-17 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like DA442_05005 4a130da4a0b1bcb0909a916b1834b23e 244 SUPERFAMILY SSF55315 4 93 7.77E-13 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like DA442_05005 4a130da4a0b1bcb0909a916b1834b23e 244 Gene3D G3DSA:3.40.1280.10 96 244 1.1E-40 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DA442_16940 91ce4f5b9b910d1b98003aa2bca89dc6 828 SMART SM00897 27 214 5.1E-26 T 14-10-2018 IPR013702 FIST domain, N-terminal DA442_16940 91ce4f5b9b910d1b98003aa2bca89dc6 828 Pfam PF08495 FIST N domain 31 212 6.4E-16 T 14-10-2018 IPR013702 FIST domain, N-terminal DA442_16940 91ce4f5b9b910d1b98003aa2bca89dc6 828 Pfam PF00563 EAL domain 598 824 1.1E-54 T 14-10-2018 IPR001633 EAL domain DA442_16940 91ce4f5b9b910d1b98003aa2bca89dc6 828 Gene3D G3DSA:3.30.70.270 399 567 8.6E-15 T 14-10-2018 DA442_16940 91ce4f5b9b910d1b98003aa2bca89dc6 828 SUPERFAMILY SSF55073 419 526 3.45E-8 T 14-10-2018 IPR029787 Nucleotide cyclase DA442_16940 91ce4f5b9b910d1b98003aa2bca89dc6 828 SUPERFAMILY SSF141868 598 825 2.88E-54 T 14-10-2018 IPR035919 EAL domain superfamily DA442_16940 91ce4f5b9b910d1b98003aa2bca89dc6 828 SMART SM00052 590 828 1.1E-26 T 14-10-2018 IPR001633 EAL domain DA442_16940 91ce4f5b9b910d1b98003aa2bca89dc6 828 Gene3D G3DSA:3.20.20.450 594 827 4.5E-56 T 14-10-2018 IPR035919 EAL domain superfamily DA442_16940 91ce4f5b9b910d1b98003aa2bca89dc6 828 SMART SM01204 215 341 2.6E-17 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 DA442_16940 91ce4f5b9b910d1b98003aa2bca89dc6 828 Pfam PF00990 Diguanylate cyclase, GGDEF domain 415 477 1.6E-6 T 14-10-2018 IPR000160 GGDEF domain DA442_16940 91ce4f5b9b910d1b98003aa2bca89dc6 828 Pfam PF10442 FIST C domain 215 338 3.1E-11 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 DA442_24240 8df9155e4d6fb733619bac2291394780 445 Gene3D G3DSA:3.40.50.620 1 126 5.6E-17 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DA442_24240 8df9155e4d6fb733619bac2291394780 445 TIGRFAM TIGR02765 crypto_DASH: cryptochrome, DASH family 4 419 4.0E-186 T 14-10-2018 IPR014133 Cryptochrome DASH GO:0003913|GO:0006281 DA442_24240 8df9155e4d6fb733619bac2291394780 445 Pfam PF00875 DNA photolyase 7 163 3.0E-20 T 14-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 DA442_24240 8df9155e4d6fb733619bac2291394780 445 PRINTS PR00147 DNA photolyase signature 321 337 5.6E-10 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 DA442_24240 8df9155e4d6fb733619bac2291394780 445 PRINTS PR00147 DNA photolyase signature 341 359 5.6E-10 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 DA442_24240 8df9155e4d6fb733619bac2291394780 445 PRINTS PR00147 DNA photolyase signature 380 394 5.6E-10 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 DA442_24240 8df9155e4d6fb733619bac2291394780 445 Gene3D G3DSA:1.10.579.10 297 443 1.3E-49 T 14-10-2018 DA442_24240 8df9155e4d6fb733619bac2291394780 445 SUPERFAMILY SSF52425 2 189 1.57E-32 T 14-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 DA442_24240 8df9155e4d6fb733619bac2291394780 445 Gene3D G3DSA:1.25.40.80 135 294 1.1E-46 T 14-10-2018 DA442_24240 8df9155e4d6fb733619bac2291394780 445 SUPERFAMILY SSF48173 195 420 7.85E-69 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 DA442_24240 8df9155e4d6fb733619bac2291394780 445 Pfam PF03441 FAD binding domain of DNA photolyase 274 423 1.8E-38 T 14-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 DA442_10305 1019b1c3eb402f5244727b6944851901 179 Gene3D G3DSA:3.40.50.300 3 153 7.9E-16 T 14-10-2018 DA442_10305 1019b1c3eb402f5244727b6944851901 179 Pfam PF01202 Shikimate kinase 12 45 6.6E-5 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 DA442_10305 1019b1c3eb402f5244727b6944851901 179 SUPERFAMILY SSF52540 5 102 2.83E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_03520 fcaae325d440392ec56d3c593e4ed7b4 621 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DA442_03520 fcaae325d440392ec56d3c593e4ed7b4 621 SUPERFAMILY SSF52922 491 619 2.36E-33 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DA442_03520 fcaae325d440392ec56d3c593e4ed7b4 621 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 619 5.6E-303 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DA442_03520 fcaae325d440392ec56d3c593e4ed7b4 621 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 620 45.957 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DA442_03520 fcaae325d440392ec56d3c593e4ed7b4 621 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DA442_03520 fcaae325d440392ec56d3c593e4ed7b4 621 SMART SM00861 319 483 4.1E-63 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DA442_03520 fcaae325d440392ec56d3c593e4ed7b4 621 Pfam PF02780 Transketolase, C-terminal domain 495 611 2.1E-28 T 14-10-2018 IPR033248 Transketolase, C-terminal domain DA442_03520 fcaae325d440392ec56d3c593e4ed7b4 621 SUPERFAMILY SSF52518 9 381 2.66E-76 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DA442_03520 fcaae325d440392ec56d3c593e4ed7b4 621 Gene3D G3DSA:3.40.50.970 317 489 1.1E-64 T 14-10-2018 DA442_03520 fcaae325d440392ec56d3c593e4ed7b4 621 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 14 282 9.8E-119 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DA442_03520 fcaae325d440392ec56d3c593e4ed7b4 621 SUPERFAMILY SSF52518 317 504 6.78E-58 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DA442_03520 fcaae325d440392ec56d3c593e4ed7b4 621 Gene3D G3DSA:3.40.50.920 495 621 6.7E-46 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DA442_03520 fcaae325d440392ec56d3c593e4ed7b4 621 Pfam PF02779 Transketolase, pyrimidine binding domain 319 478 1.4E-36 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DA442_23175 dc29b38a66b695da3dea8b3ce7087d3e 559 Pfam PF03961 Flagellar Assembly Protein A 81 545 6.4E-126 T 14-10-2018 IPR005646 Flagellar assembly protein A DA442_18100 b2b747f1c39356c1785cbb43ef637e1b 553 SUPERFAMILY SSF54862 454 553 1.38E-27 T 14-10-2018 DA442_18100 b2b747f1c39356c1785cbb43ef637e1b 553 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 450 551 4.6E-47 T 14-10-2018 DA442_18100 b2b747f1c39356c1785cbb43ef637e1b 553 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 5.9E-6 T 14-10-2018 DA442_18100 b2b747f1c39356c1785cbb43ef637e1b 553 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 181 196 5.9E-6 T 14-10-2018 DA442_18100 b2b747f1c39356c1785cbb43ef637e1b 553 SUPERFAMILY SSF51905 3 452 2.39E-56 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_18100 b2b747f1c39356c1785cbb43ef637e1b 553 Gene3D G3DSA:3.50.50.60 7 386 8.1E-183 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_18100 b2b747f1c39356c1785cbb43ef637e1b 553 Pfam PF13450 NAD(P)-binding Rossmann-like domain 12 58 6.0E-7 T 14-10-2018 DA442_18100 b2b747f1c39356c1785cbb43ef637e1b 553 SUPERFAMILY SSF54373 213 310 3.45E-32 T 14-10-2018 DA442_18100 b2b747f1c39356c1785cbb43ef637e1b 553 Gene3D G3DSA:3.30.70.20 455 548 5.9E-35 T 14-10-2018 DA442_18100 b2b747f1c39356c1785cbb43ef637e1b 553 Gene3D G3DSA:3.30.9.90 80 454 8.1E-183 T 14-10-2018 DA442_08955 f4287ea5b6729072ae1a1d7178f8db5e 326 Gene3D G3DSA:2.40.30.170 38 323 6.4E-31 T 14-10-2018 DA442_08955 f4287ea5b6729072ae1a1d7178f8db5e 326 Gene3D G3DSA:1.10.287.470 78 207 6.4E-31 T 14-10-2018 DA442_08955 f4287ea5b6729072ae1a1d7178f8db5e 326 SUPERFAMILY SSF111369 43 124 1.11E-8 T 14-10-2018 DA442_08955 f4287ea5b6729072ae1a1d7178f8db5e 326 Gene3D G3DSA:2.40.50.100 44 242 6.4E-31 T 14-10-2018 DA442_08955 f4287ea5b6729072ae1a1d7178f8db5e 326 Pfam PF13437 HlyD family secretion protein 208 312 4.7E-6 T 14-10-2018 DA442_08955 f4287ea5b6729072ae1a1d7178f8db5e 326 Pfam PF13533 Biotin-lipoyl like 47 91 1.5E-12 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain DA442_09455 8a0b8cdee01995a194eaac5db3da2be4 92 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 1 89 3.1E-17 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family DA442_09455 8a0b8cdee01995a194eaac5db3da2be4 92 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 2 89 2.7E-15 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family DA442_09455 8a0b8cdee01995a194eaac5db3da2be4 92 Gene3D G3DSA:3.30.2310.20 1 90 6.3E-16 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily DA442_20875 483191708b54a05381ca3319cfc75cc1 102 Hamap MF_02200 Chaperone NapD [napD]. 6 82 19.294 T 14-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly DA442_20875 483191708b54a05381ca3319cfc75cc1 102 Gene3D G3DSA:3.30.70.920 6 75 2.2E-22 T 14-10-2018 DA442_20875 483191708b54a05381ca3319cfc75cc1 102 Pfam PF03927 NapD protein 6 80 2.1E-29 T 14-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly DA442_17125 a75d3adfec50bfa880d8a91297cdb108 219 PIRSF PIRSF006324 1 214 2.7E-48 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DA442_17125 a75d3adfec50bfa880d8a91297cdb108 219 Pfam PF01810 LysE type translocator 16 212 2.0E-37 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DA442_20820 01bf963e2a5c13302450f14b66c15169 137 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 DA442_20820 01bf963e2a5c13302450f14b66c15169 137 Pfam PF00472 RF-1 domain 7 132 3.7E-23 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 DA442_20820 01bf963e2a5c13302450f14b66c15169 137 SUPERFAMILY SSF75620 8 115 2.35E-10 T 14-10-2018 DA442_20820 01bf963e2a5c13302450f14b66c15169 137 Gene3D G3DSA:3.30.160.20 1 136 3.7E-37 T 14-10-2018 DA442_08980 48bdaa53e7b36f2cbff2684d6ff24c83 128 SUPERFAMILY SSF51182 10 127 7.37E-26 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DA442_08980 48bdaa53e7b36f2cbff2684d6ff24c83 128 ProDom PD080544 SYNTHASE 4.2.1.- LYASE L-ECTOINE DEHYDRATASE N-ACETYLDIAMINOBUTYRATE ECTOINE ENZYME SYNTHASE:ECTOINE ECTC 1 118 9.0E-59 T 14-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 DA442_08980 48bdaa53e7b36f2cbff2684d6ff24c83 128 Hamap MF_01255 L-ectoine synthase [ectC]. 1 128 39.318 T 14-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 DA442_08980 48bdaa53e7b36f2cbff2684d6ff24c83 128 Gene3D G3DSA:2.60.120.10 1 116 6.5E-45 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DA442_08980 48bdaa53e7b36f2cbff2684d6ff24c83 128 Pfam PF06339 Ectoine synthase 1 127 3.7E-61 T 14-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 DA442_23810 e5ccffaa92b00d683cd97bf97f002c0e 171 SUPERFAMILY SSF55729 3 169 4.95E-31 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_23810 e5ccffaa92b00d683cd97bf97f002c0e 171 Gene3D G3DSA:3.40.630.30 2 158 2.7E-30 T 14-10-2018 DA442_23810 e5ccffaa92b00d683cd97bf97f002c0e 171 Pfam PF13302 Acetyltransferase (GNAT) domain 13 146 1.2E-18 T 14-10-2018 IPR000182 GNAT domain DA442_13105 863cb736030ee251ddd40038d37a1158 1227 Gene3D G3DSA:3.90.320.10 918 1217 8.7E-103 T 14-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal DA442_13105 863cb736030ee251ddd40038d37a1158 1227 Gene3D G3DSA:1.10.3170.10 173 365 2.9E-159 T 14-10-2018 DA442_13105 863cb736030ee251ddd40038d37a1158 1227 SUPERFAMILY SSF52980 928 1211 1.82E-87 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DA442_13105 863cb736030ee251ddd40038d37a1158 1227 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 23 1210 22.961 T 14-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 DA442_13105 863cb736030ee251ddd40038d37a1158 1227 Gene3D G3DSA:1.10.486.10 602 756 5.0E-155 T 14-10-2018 DA442_13105 863cb736030ee251ddd40038d37a1158 1227 Gene3D G3DSA:3.40.50.300 461 873 5.0E-155 T 14-10-2018 DA442_13105 863cb736030ee251ddd40038d37a1158 1227 Pfam PF13361 UvrD-like helicase C-terminal domain 459 842 7.0E-18 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 DA442_13105 863cb736030ee251ddd40038d37a1158 1227 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 25 1209 0.0 T 14-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 DA442_13105 863cb736030ee251ddd40038d37a1158 1227 Pfam PF00580 UvrD/REP helicase N-terminal domain 27 452 7.1E-59 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 DA442_13105 863cb736030ee251ddd40038d37a1158 1227 SUPERFAMILY SSF52540 31 870 4.82E-110 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_13105 863cb736030ee251ddd40038d37a1158 1227 Gene3D G3DSA:3.40.50.300 25 452 2.9E-159 T 14-10-2018 DA442_13105 863cb736030ee251ddd40038d37a1158 1227 Pfam PF12705 PD-(D/E)XK nuclease superfamily 985 1212 3.6E-7 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type DA442_21440 477b5ec7653a6fa57c9982114473ba15 524 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 307 513 1.5E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DA442_21440 477b5ec7653a6fa57c9982114473ba15 524 Gene3D G3DSA:3.10.650.10 108 278 1.1E-52 T 14-10-2018 DA442_21440 477b5ec7653a6fa57c9982114473ba15 524 Gene3D G3DSA:2.40.430.10 128 214 1.1E-52 T 14-10-2018 DA442_21440 477b5ec7653a6fa57c9982114473ba15 524 SUPERFAMILY SSF161098 273 514 4.97E-57 T 14-10-2018 IPR035906 MetI-like superfamily DA442_21440 477b5ec7653a6fa57c9982114473ba15 524 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 110 270 4.3E-60 T 14-10-2018 IPR029345 Maltose transport system permease protein MalF, P2 domain DA442_21440 477b5ec7653a6fa57c9982114473ba15 524 SUPERFAMILY SSF160964 24 270 1.83E-82 T 14-10-2018 DA442_21440 477b5ec7653a6fa57c9982114473ba15 524 Gene3D G3DSA:1.10.3720.10 280 523 3.2E-68 T 14-10-2018 IPR035906 MetI-like superfamily DA442_21440 477b5ec7653a6fa57c9982114473ba15 524 Gene3D G3DSA:1.20.58.370 16 105 2.0E-33 T 14-10-2018 IPR035277 MalF, N-terminal DA442_06155 5cc5f6a8fd946166f7a468fc68e4f17e 598 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 20 106 3.0E-18 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 DA442_06155 5cc5f6a8fd946166f7a468fc68e4f17e 598 SUPERFAMILY SSF46548 409 552 4.84E-17 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DA442_06155 5cc5f6a8fd946166f7a468fc68e4f17e 598 PRINTS PR00419 Adrenodoxin reductase family signature 185 195 1.3E-22 T 14-10-2018 DA442_06155 5cc5f6a8fd946166f7a468fc68e4f17e 598 PRINTS PR00419 Adrenodoxin reductase family signature 252 266 1.3E-22 T 14-10-2018 DA442_06155 5cc5f6a8fd946166f7a468fc68e4f17e 598 PRINTS PR00419 Adrenodoxin reductase family signature 143 156 1.3E-22 T 14-10-2018 DA442_06155 5cc5f6a8fd946166f7a468fc68e4f17e 598 PRINTS PR00419 Adrenodoxin reductase family signature 286 299 1.3E-22 T 14-10-2018 DA442_06155 5cc5f6a8fd946166f7a468fc68e4f17e 598 PRINTS PR00419 Adrenodoxin reductase family signature 120 142 1.3E-22 T 14-10-2018 DA442_06155 5cc5f6a8fd946166f7a468fc68e4f17e 598 Gene3D G3DSA:1.10.1060.10 6 115 5.9E-26 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DA442_06155 5cc5f6a8fd946166f7a468fc68e4f17e 598 Pfam PF13534 4Fe-4S dicluster domain 489 547 1.8E-5 T 14-10-2018 DA442_06155 5cc5f6a8fd946166f7a468fc68e4f17e 598 Gene3D G3DSA:3.50.50.60 116 224 1.6E-17 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_06155 5cc5f6a8fd946166f7a468fc68e4f17e 598 Gene3D G3DSA:3.50.50.60 225 359 2.0E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_06155 5cc5f6a8fd946166f7a468fc68e4f17e 598 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 533 544 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DA442_06155 5cc5f6a8fd946166f7a468fc68e4f17e 598 SUPERFAMILY SSF51971 117 360 8.24E-62 T 14-10-2018 DA442_06155 5cc5f6a8fd946166f7a468fc68e4f17e 598 SUPERFAMILY SSF46548 15 129 6.28E-22 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DA442_06155 5cc5f6a8fd946166f7a468fc68e4f17e 598 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 120 402 7.4E-27 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DA442_17875 4da7dcbf492a24214fb3e80c3614773d 518 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 335 482 2.8E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_17875 4da7dcbf492a24214fb3e80c3614773d 518 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 279 308 2.7E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DA442_17875 4da7dcbf492a24214fb3e80c3614773d 518 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 355 382 2.7E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DA442_17875 4da7dcbf492a24214fb3e80c3614773d 518 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 384 413 2.7E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DA442_17875 4da7dcbf492a24214fb3e80c3614773d 518 SUPERFAMILY SSF55785 17 110 6.93E-22 T 14-10-2018 IPR035965 PAS domain superfamily DA442_17875 4da7dcbf492a24214fb3e80c3614773d 518 Pfam PF08447 PAS fold 28 110 3.1E-17 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 DA442_17875 4da7dcbf492a24214fb3e80c3614773d 518 Gene3D G3DSA:3.30.450.20 4 112 2.7E-19 T 14-10-2018 DA442_17875 4da7dcbf492a24214fb3e80c3614773d 518 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 18 105 2.7E-9 T 14-10-2018 IPR000014 PAS domain DA442_17875 4da7dcbf492a24214fb3e80c3614773d 518 Gene3D G3DSA:1.10.287.950 186 518 5.8E-62 T 14-10-2018 DA442_17875 4da7dcbf492a24214fb3e80c3614773d 518 SUPERFAMILY SSF58104 263 517 1.44E-69 T 14-10-2018 DA442_17875 4da7dcbf492a24214fb3e80c3614773d 518 SMART SM00283 257 518 9.2E-65 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_10900 c9bec5b9d3e18a913ab4bde6e5303320 410 SUPERFAMILY SSF142433 252 386 2.09E-8 T 14-10-2018 IPR036653 CinA-like, C-terminal DA442_10900 c9bec5b9d3e18a913ab4bde6e5303320 410 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 410 103.621 T 14-10-2018 IPR008135 Competence-induced protein CinA DA442_10900 c9bec5b9d3e18a913ab4bde6e5303320 410 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 2 403 6.9E-76 T 14-10-2018 IPR008135 Competence-induced protein CinA DA442_10900 c9bec5b9d3e18a913ab4bde6e5303320 410 Pfam PF00994 Probable molybdopterin binding domain 4 169 1.3E-28 T 14-10-2018 IPR001453 MoaB/Mog domain DA442_10900 c9bec5b9d3e18a913ab4bde6e5303320 410 SUPERFAMILY SSF53218 2 204 1.96E-33 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily DA442_10900 c9bec5b9d3e18a913ab4bde6e5303320 410 SMART SM00852 4 171 5.6E-30 T 14-10-2018 IPR001453 MoaB/Mog domain DA442_10900 c9bec5b9d3e18a913ab4bde6e5303320 410 Gene3D G3DSA:3.40.980.10 1 171 1.9E-43 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily DA442_10900 c9bec5b9d3e18a913ab4bde6e5303320 410 PIRSF PIRSF006728 1 391 7.1E-118 T 14-10-2018 IPR008135 Competence-induced protein CinA DA442_21045 ebef77a8ba1441361dec1d6fec6176eb 477 SUPERFAMILY SSF55347 288 451 3.74E-52 T 14-10-2018 DA442_21045 ebef77a8ba1441361dec1d6fec6176eb 477 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 286 293 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_21045 ebef77a8ba1441361dec1d6fec6176eb 477 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 293 450 2.6E-44 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_21045 ebef77a8ba1441361dec1d6fec6176eb 477 Gene3D G3DSA:3.30.360.10 287 452 7.6E-114 T 14-10-2018 DA442_21045 ebef77a8ba1441361dec1d6fec6176eb 477 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 129 462 5.0E-113 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_21045 ebef77a8ba1441361dec1d6fec6176eb 477 SUPERFAMILY SSF51735 128 304 1.83E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_21045 ebef77a8ba1441361dec1d6fec6176eb 477 Gene3D G3DSA:3.40.50.720 129 462 7.6E-114 T 14-10-2018 DA442_21045 ebef77a8ba1441361dec1d6fec6176eb 477 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 128 238 2.0E-21 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_21045 ebef77a8ba1441361dec1d6fec6176eb 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 282 300 2.0E-17 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_21045 ebef77a8ba1441361dec1d6fec6176eb 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 246 259 2.0E-17 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_21045 ebef77a8ba1441361dec1d6fec6176eb 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 309 325 2.0E-17 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_21045 ebef77a8ba1441361dec1d6fec6176eb 477 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 365 382 2.0E-17 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_21045 ebef77a8ba1441361dec1d6fec6176eb 477 SMART SM00846 127 288 1.1E-51 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_02170 e4c36299ead45531ba9e1d3875876980 272 Gene3D G3DSA:1.10.287.70 137 188 1.0E-14 T 14-10-2018 DA442_02170 e4c36299ead45531ba9e1d3875876980 272 Gene3D G3DSA:1.20.120.350 24 136 2.2E-14 T 14-10-2018 IPR027359 Voltage-dependent channel domain superfamily DA442_02170 e4c36299ead45531ba9e1d3875876980 272 Pfam PF07885 Ion channel 146 225 1.3E-14 T 14-10-2018 IPR013099 Potassium channel domain DA442_02170 e4c36299ead45531ba9e1d3875876980 272 Gene3D G3DSA:1.20.5.110 190 232 9.9E-9 T 14-10-2018 DA442_02170 e4c36299ead45531ba9e1d3875876980 272 PRINTS PR00169 Potassium channel signature 107 133 8.2E-6 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 DA442_02170 e4c36299ead45531ba9e1d3875876980 272 PRINTS PR00169 Potassium channel signature 169 191 8.2E-6 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 DA442_02170 e4c36299ead45531ba9e1d3875876980 272 PRINTS PR00169 Potassium channel signature 198 224 8.2E-6 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 DA442_02170 e4c36299ead45531ba9e1d3875876980 272 SUPERFAMILY SSF81324 26 225 2.57E-45 T 14-10-2018 DA442_20930 2c4d2eeb503bf1d92d3e853422fee8f5 300 Pfam PF02355 Protein export membrane protein 101 284 4.6E-53 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial DA442_20930 2c4d2eeb503bf1d92d3e853422fee8f5 300 PRINTS PR01755 Bacterial translocase SecF protein signature 145 159 4.4E-24 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DA442_20930 2c4d2eeb503bf1d92d3e853422fee8f5 300 PRINTS PR01755 Bacterial translocase SecF protein signature 225 240 4.4E-24 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DA442_20930 2c4d2eeb503bf1d92d3e853422fee8f5 300 PRINTS PR01755 Bacterial translocase SecF protein signature 193 211 4.4E-24 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DA442_20930 2c4d2eeb503bf1d92d3e853422fee8f5 300 PRINTS PR01755 Bacterial translocase SecF protein signature 34 49 4.4E-24 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DA442_20930 2c4d2eeb503bf1d92d3e853422fee8f5 300 Gene3D G3DSA:1.20.1640.10 95 290 2.0E-8 T 14-10-2018 DA442_20930 2c4d2eeb503bf1d92d3e853422fee8f5 300 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 7 287 21.384 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 DA442_20930 2c4d2eeb503bf1d92d3e853422fee8f5 300 SUPERFAMILY SSF82866 85 283 1.57E-34 T 14-10-2018 DA442_20930 2c4d2eeb503bf1d92d3e853422fee8f5 300 Pfam PF07549 SecD/SecF GG Motif 29 55 3.6E-9 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site DA442_20930 2c4d2eeb503bf1d92d3e853422fee8f5 300 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 35 276 2.8E-63 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 DA442_20930 2c4d2eeb503bf1d92d3e853422fee8f5 300 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 107 274 1.4E-45 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DA442_23825 90a75b7650650ad49e1866a9d6ba0eac 241 SMART SM00014 77 225 1.8E-13 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DA442_23825 90a75b7650650ad49e1866a9d6ba0eac 241 Pfam PF01569 PAP2 superfamily 83 224 4.7E-18 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DA442_23825 90a75b7650650ad49e1866a9d6ba0eac 241 Gene3D G3DSA:1.20.144.10 5 235 2.6E-47 T 14-10-2018 DA442_23825 90a75b7650650ad49e1866a9d6ba0eac 241 SUPERFAMILY SSF48317 25 224 5.36E-21 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily DA442_03065 6dc2475e11ac6e28a608537ed9e6d83c 618 Gene3D G3DSA:3.30.1360.200 281 434 3.6E-50 T 14-10-2018 DA442_03065 6dc2475e11ac6e28a608537ed9e6d83c 618 Pfam PF13721 SecD export protein N-terminal TM region 2 103 6.9E-37 T 14-10-2018 IPR027398 SecD export protein N-terminal TM domain DA442_03065 6dc2475e11ac6e28a608537ed9e6d83c 618 SUPERFAMILY SSF82866 413 609 2.35E-44 T 14-10-2018 DA442_03065 6dc2475e11ac6e28a608537ed9e6d83c 618 Pfam PF02355 Protein export membrane protein 436 597 8.4E-18 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial DA442_03065 6dc2475e11ac6e28a608537ed9e6d83c 618 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 618 47.598 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 DA442_03065 6dc2475e11ac6e28a608537ed9e6d83c 618 Gene3D G3DSA:3.30.70.3400 222 440 3.6E-50 T 14-10-2018 DA442_03065 6dc2475e11ac6e28a608537ed9e6d83c 618 PRINTS PR00702 Acriflavin resistance protein family signature 581 604 4.3E-5 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_03065 6dc2475e11ac6e28a608537ed9e6d83c 618 PRINTS PR00702 Acriflavin resistance protein family signature 506 530 4.3E-5 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_03065 6dc2475e11ac6e28a608537ed9e6d83c 618 PRINTS PR00702 Acriflavin resistance protein family signature 452 475 4.3E-5 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_03065 6dc2475e11ac6e28a608537ed9e6d83c 618 Pfam PF07549 SecD/SecF GG Motif 116 141 2.5E-7 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site DA442_03065 6dc2475e11ac6e28a608537ed9e6d83c 618 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 604 1.8E-151 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 DA442_03065 6dc2475e11ac6e28a608537ed9e6d83c 618 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 348 597 3.0E-82 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DA442_03065 6dc2475e11ac6e28a608537ed9e6d83c 618 Gene3D G3DSA:1.20.1640.10 451 603 2.4E-7 T 14-10-2018 DA442_22830 8611beda3f3c3e9bb69e08143759e97f 185 PIRSF PIRSF000239 1 185 1.8E-53 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DA442_22830 8611beda3f3c3e9bb69e08143759e97f 185 Gene3D G3DSA:3.40.30.10 1 184 4.5E-63 T 14-10-2018 DA442_22830 8611beda3f3c3e9bb69e08143759e97f 185 Pfam PF00578 AhpC/TSA family 5 131 2.9E-35 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DA442_22830 8611beda3f3c3e9bb69e08143759e97f 185 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 185 1.0E-104 T 14-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 DA442_22830 8611beda3f3c3e9bb69e08143759e97f 185 SUPERFAMILY SSF52833 2 184 1.48E-56 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_22830 8611beda3f3c3e9bb69e08143759e97f 185 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 154 179 7.9E-7 T 14-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DA442_00160 0172bf1a210d39f3f46955c7d7ee3c41 296 Gene3D G3DSA:3.40.190.10 165 265 1.3E-26 T 14-10-2018 DA442_00160 0172bf1a210d39f3f46955c7d7ee3c41 296 Gene3D G3DSA:3.40.190.10 91 287 1.3E-26 T 14-10-2018 DA442_00160 0172bf1a210d39f3f46955c7d7ee3c41 296 SUPERFAMILY SSF46785 1 87 9.31E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_00160 0172bf1a210d39f3f46955c7d7ee3c41 296 Pfam PF03466 LysR substrate binding domain 87 289 3.5E-34 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_00160 0172bf1a210d39f3f46955c7d7ee3c41 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.4E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_00160 0172bf1a210d39f3f46955c7d7ee3c41 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.4E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_00160 0172bf1a210d39f3f46955c7d7ee3c41 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.4E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_00160 0172bf1a210d39f3f46955c7d7ee3c41 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 4.4E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_00160 0172bf1a210d39f3f46955c7d7ee3c41 296 Gene3D G3DSA:1.10.10.10 1 90 5.8E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_00160 0172bf1a210d39f3f46955c7d7ee3c41 296 SUPERFAMILY SSF53850 87 290 1.21E-28 T 14-10-2018 DA442_12940 344cef93d718ea5c34938b324ea442b5 407 Gene3D G3DSA:2.40.30.10 126 264 3.0E-53 T 14-10-2018 DA442_12940 344cef93d718ea5c34938b324ea442b5 407 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 3 407 2.1E-229 T 14-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 DA442_12940 344cef93d718ea5c34938b324ea442b5 407 SUPERFAMILY SSF52343 258 402 9.82E-36 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DA442_12940 344cef93d718ea5c34938b324ea442b5 407 Gene3D G3DSA:3.10.20.30 34 125 6.0E-33 T 14-10-2018 IPR012675 Beta-grasp domain superfamily DA442_12940 344cef93d718ea5c34938b324ea442b5 407 SUPERFAMILY SSF54292 38 124 1.06E-21 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DA442_12940 344cef93d718ea5c34938b324ea442b5 407 Gene3D G3DSA:3.40.50.80 275 393 1.6E-30 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DA442_12940 344cef93d718ea5c34938b324ea442b5 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 242 251 4.3E-6 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DA442_12940 344cef93d718ea5c34938b324ea442b5 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 302 311 4.3E-6 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DA442_12940 344cef93d718ea5c34938b324ea442b5 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 209 216 4.3E-6 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DA442_12940 344cef93d718ea5c34938b324ea442b5 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 276 295 4.3E-6 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DA442_12940 344cef93d718ea5c34938b324ea442b5 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 373 381 4.3E-6 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DA442_12940 344cef93d718ea5c34938b324ea442b5 407 Pfam PF00175 Oxidoreductase NAD-binding domain 277 385 2.7E-16 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 DA442_12940 344cef93d718ea5c34938b324ea442b5 407 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 43 115 2.5E-10 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DA442_12940 344cef93d718ea5c34938b324ea442b5 407 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 1 407 62.814 T 14-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 DA442_12940 344cef93d718ea5c34938b324ea442b5 407 Pfam PF00970 Oxidoreductase FAD-binding domain 204 266 9.4E-9 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 DA442_12940 344cef93d718ea5c34938b324ea442b5 407 PIRSF PIRSF000044 1 407 5.8E-219 T 14-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 DA442_12940 344cef93d718ea5c34938b324ea442b5 407 SUPERFAMILY SSF63380 105 272 3.08E-36 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DA442_10950 9152568fd65d5297958657e51fc8e9f4 185 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 DA442_10950 9152568fd65d5297958657e51fc8e9f4 185 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 180 8.6E-55 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 DA442_10950 9152568fd65d5297958657e51fc8e9f4 185 PIRSF PIRSF000847 1 184 4.0E-46 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 DA442_10950 9152568fd65d5297958657e51fc8e9f4 185 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 1.4E-17 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 DA442_10950 9152568fd65d5297958657e51fc8e9f4 185 Gene3D G3DSA:1.20.120.1760 2 180 3.3E-17 T 14-10-2018 DA442_15250 c0df892ac257d570f71c9f16565f7ceb 489 Gene3D G3DSA:3.40.1260.20 403 489 1.5E-6 T 14-10-2018 DA442_15250 c0df892ac257d570f71c9f16565f7ceb 489 Gene3D G3DSA:2.40.50.140 31 127 6.5E-32 T 14-10-2018 DA442_15250 c0df892ac257d570f71c9f16565f7ceb 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 1.1E-173 T 14-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 DA442_15250 c0df892ac257d570f71c9f16565f7ceb 489 SUPERFAMILY SSF50249 39 128 1.35E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_15250 c0df892ac257d570f71c9f16565f7ceb 489 Pfam PF10150 Ribonuclease E/G family 124 393 1.5E-104 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 DA442_15250 c0df892ac257d570f71c9f16565f7ceb 489 SMART SM00316 37 122 5.8E-10 T 14-10-2018 IPR022967 RNA-binding domain, S1 DA442_15250 c0df892ac257d570f71c9f16565f7ceb 489 Pfam PF00575 S1 RNA binding domain 38 109 5.7E-6 T 14-10-2018 IPR003029 S1 domain GO:0003676 DA442_11015 119d240819c596053297bd1a583d742d 525 Pfam PF00425 chorismate binding enzyme 247 506 1.5E-84 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal DA442_11015 119d240819c596053297bd1a583d742d 525 Gene3D G3DSA:3.60.120.10 8 522 9.6E-184 T 14-10-2018 IPR005801 ADC synthase GO:0009058 DA442_11015 119d240819c596053297bd1a583d742d 525 PRINTS PR00095 Anthranilate synthase component I signature 463 477 5.9E-23 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DA442_11015 119d240819c596053297bd1a583d742d 525 PRINTS PR00095 Anthranilate synthase component I signature 448 462 5.9E-23 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DA442_11015 119d240819c596053297bd1a583d742d 525 PRINTS PR00095 Anthranilate synthase component I signature 368 381 5.9E-23 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DA442_11015 119d240819c596053297bd1a583d742d 525 PRINTS PR00095 Anthranilate synthase component I signature 354 367 5.9E-23 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DA442_11015 119d240819c596053297bd1a583d742d 525 PIRSF PIRSF001373 3 525 9.3E-262 T 14-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DA442_11015 119d240819c596053297bd1a583d742d 525 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 22 518 6.7E-223 T 14-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DA442_11015 119d240819c596053297bd1a583d742d 525 SUPERFAMILY SSF56322 14 517 2.09E-158 T 14-10-2018 IPR005801 ADC synthase GO:0009058 DA442_11015 119d240819c596053297bd1a583d742d 525 Pfam PF04715 Anthranilate synthase component I, N terminal region 24 197 6.4E-14 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DA442_07450 0408a2b16e10c3d3efe84ab257a9cff2 157 Gene3D G3DSA:3.40.50.2300 1 135 3.7E-20 T 14-10-2018 DA442_07450 0408a2b16e10c3d3efe84ab257a9cff2 157 SUPERFAMILY SSF52172 2 132 1.31E-20 T 14-10-2018 IPR011006 CheY-like superfamily DA442_07450 0408a2b16e10c3d3efe84ab257a9cff2 157 Pfam PF00072 Response regulator receiver domain 7 125 5.2E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_07450 0408a2b16e10c3d3efe84ab257a9cff2 157 SMART SM00448 4 125 1.1E-11 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_19705 3068d23cef79cdc59e2a2dfd190ad095 725 SUPERFAMILY SSF56935 40 723 2.6E-88 T 14-10-2018 DA442_19705 3068d23cef79cdc59e2a2dfd190ad095 725 Pfam PF00593 TonB dependent receptor 249 722 6.3E-30 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DA442_19705 3068d23cef79cdc59e2a2dfd190ad095 725 Gene3D G3DSA:2.40.170.20 172 725 1.9E-47 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DA442_19705 3068d23cef79cdc59e2a2dfd190ad095 725 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 156 1.2E-17 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain DA442_19705 3068d23cef79cdc59e2a2dfd190ad095 725 Gene3D G3DSA:2.170.130.10 47 165 2.7E-22 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DA442_19705 3068d23cef79cdc59e2a2dfd190ad095 725 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 55 723 3.6E-80 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 DA442_13615 a87207fd3b8823f6664975ea3d80c89f 799 Gene3D G3DSA:3.40.50.300 425 734 9.7E-56 T 14-10-2018 DA442_13615 a87207fd3b8823f6664975ea3d80c89f 799 Gene3D G3DSA:1.10.8.730 489 603 9.7E-56 T 14-10-2018 DA442_13615 a87207fd3b8823f6664975ea3d80c89f 799 Pfam PF12846 AAA-like domain 437 692 5.8E-14 T 14-10-2018 DA442_13615 a87207fd3b8823f6664975ea3d80c89f 799 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 11 241 1.9E-51 T 14-10-2018 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase DA442_13615 a87207fd3b8823f6664975ea3d80c89f 799 TIGRFAM TIGR02746 TraC-F-type: type-IV secretion system protein TraC 15 795 2.0E-212 T 14-10-2018 IPR014117 Type-IV secretion system protein TraC DA442_13615 a87207fd3b8823f6664975ea3d80c89f 799 SUPERFAMILY SSF52540 389 722 3.84E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_21800 74f433a8de95b75efd723e31d370e095 270 Pfam PF13411 MerR HTH family regulatory protein 10 76 8.3E-18 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DA442_21800 74f433a8de95b75efd723e31d370e095 270 SUPERFAMILY SSF46955 10 100 6.41E-17 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DA442_21800 74f433a8de95b75efd723e31d370e095 270 SMART SM00422 10 79 5.5E-17 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DA442_21800 74f433a8de95b75efd723e31d370e095 270 Gene3D G3DSA:1.10.1660.10 4 76 1.2E-24 T 14-10-2018 DA442_21225 354a55bbc67408402c3c08796b4b2553 239 SUPERFAMILY SSF51735 3 223 4.47E-63 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_21225 354a55bbc67408402c3c08796b4b2553 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DA442_21225 354a55bbc67408402c3c08796b4b2553 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 5.1E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_21225 354a55bbc67408402c3c08796b4b2553 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 5.1E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_21225 354a55bbc67408402c3c08796b4b2553 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 5.1E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_21225 354a55bbc67408402c3c08796b4b2553 239 Gene3D G3DSA:3.40.50.720 1 239 2.3E-78 T 14-10-2018 DA442_21225 354a55bbc67408402c3c08796b4b2553 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 2.5E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_21225 354a55bbc67408402c3c08796b4b2553 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 2.5E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_21225 354a55bbc67408402c3c08796b4b2553 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 2.5E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_21225 354a55bbc67408402c3c08796b4b2553 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.5E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_21225 354a55bbc67408402c3c08796b4b2553 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 2.5E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_21225 354a55bbc67408402c3c08796b4b2553 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 2.5E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_21225 354a55bbc67408402c3c08796b4b2553 239 Pfam PF00106 short chain dehydrogenase 3 188 1.0E-52 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_17000 8e540a4194402cae1e0e5e3480f638be 393 SMART SM00028 327 360 0.0011 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_17000 8e540a4194402cae1e0e5e3480f638be 393 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 2 386 2.8E-110 T 14-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 DA442_17000 8e540a4194402cae1e0e5e3480f638be 393 SUPERFAMILY SSF48452 263 389 1.19E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_17000 8e540a4194402cae1e0e5e3480f638be 393 SUPERFAMILY SSF48452 85 294 4.11E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_17000 8e540a4194402cae1e0e5e3480f638be 393 Pfam PF07219 HemY protein N-terminus 26 132 1.9E-27 T 14-10-2018 IPR010817 HemY, N-terminal DA442_03600 1cfca433f85b6c0b2ce157afafd443bf 181 Pfam PF07348 Syd protein (SUKH-2) 7 178 1.4E-69 T 14-10-2018 IPR009948 Syd GO:0009898 DA442_03600 1cfca433f85b6c0b2ce157afafd443bf 181 Gene3D G3DSA:3.40.1580.20 1 181 3.4E-68 T 14-10-2018 IPR038228 Syd superfamily DA442_03600 1cfca433f85b6c0b2ce157afafd443bf 181 Hamap MF_01104 Protein Syd [syd]. 3 181 35.985 T 14-10-2018 IPR009948 Syd GO:0009898 DA442_12495 1841f04c53f240bdc50882ee6a859c58 378 Gene3D G3DSA:3.30.70.2120 174 276 1.1E-76 T 14-10-2018 DA442_12495 1841f04c53f240bdc50882ee6a859c58 378 Pfam PF07196 Flagellin hook IN motif 195 249 6.0E-11 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 DA442_12495 1841f04c53f240bdc50882ee6a859c58 378 SUPERFAMILY SSF64518 1 377 7.85E-96 T 14-10-2018 DA442_12495 1841f04c53f240bdc50882ee6a859c58 378 Gene3D G3DSA:1.20.1330.10 44 328 1.1E-76 T 14-10-2018 DA442_12495 1841f04c53f240bdc50882ee6a859c58 378 PRINTS PR00207 Flagellin signature 37 54 2.5E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DA442_12495 1841f04c53f240bdc50882ee6a859c58 378 PRINTS PR00207 Flagellin signature 111 134 2.5E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DA442_12495 1841f04c53f240bdc50882ee6a859c58 378 PRINTS PR00207 Flagellin signature 76 95 2.5E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DA442_12495 1841f04c53f240bdc50882ee6a859c58 378 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 8.4E-42 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DA442_12495 1841f04c53f240bdc50882ee6a859c58 378 Gene3D G3DSA:1.10.8.410 329 377 3.1E-20 T 14-10-2018 DA442_12495 1841f04c53f240bdc50882ee6a859c58 378 Pfam PF00700 Bacterial flagellin C-terminal helical region 293 377 8.3E-26 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DA442_13435 32b5b3d14880a53e486ea043e826f9d1 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 1.2E-7 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DA442_13435 32b5b3d14880a53e486ea043e826f9d1 529 Gene3D G3DSA:3.30.70.3280 390 529 1.6E-52 T 14-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily DA442_13435 32b5b3d14880a53e486ea043e826f9d1 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 3.3E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_13435 32b5b3d14880a53e486ea043e826f9d1 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 3.3E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_13435 32b5b3d14880a53e486ea043e826f9d1 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 3.3E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_13435 32b5b3d14880a53e486ea043e826f9d1 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 3.3E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_13435 32b5b3d14880a53e486ea043e826f9d1 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 51.832 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 DA442_13435 32b5b3d14880a53e486ea043e826f9d1 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 154 4.8E-19 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DA442_13435 32b5b3d14880a53e486ea043e826f9d1 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site DA442_13435 32b5b3d14880a53e486ea043e826f9d1 529 Pfam PF00009 Elongation factor Tu GTP binding domain 12 277 3.9E-46 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_13435 32b5b3d14880a53e486ea043e826f9d1 529 SUPERFAMILY SSF52540 9 277 2.06E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_13435 32b5b3d14880a53e486ea043e826f9d1 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 2.9E-46 T 14-10-2018 IPR032090 Peptide chain release factor 3, C-terminal DA442_13435 32b5b3d14880a53e486ea043e826f9d1 529 SUPERFAMILY SSF50447 262 393 4.04E-27 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DA442_13435 32b5b3d14880a53e486ea043e826f9d1 529 Gene3D G3DSA:3.40.50.300 72 379 7.6E-114 T 14-10-2018 DA442_13435 32b5b3d14880a53e486ea043e826f9d1 529 Gene3D G3DSA:3.40.50.300 110 275 7.6E-114 T 14-10-2018 DA442_13435 32b5b3d14880a53e486ea043e826f9d1 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 5 529 9.5E-301 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 DA442_13435 32b5b3d14880a53e486ea043e826f9d1 529 SUPERFAMILY SSF54980 393 468 2.81E-17 T 14-10-2018 IPR035647 EF-G domain III/V-like DA442_00265 eabb4de582a22f020b62a8ff97c42986 318 Gene3D G3DSA:1.10.3720.10 92 312 5.9E-25 T 14-10-2018 IPR035906 MetI-like superfamily DA442_00265 eabb4de582a22f020b62a8ff97c42986 318 SUPERFAMILY SSF161098 99 300 3.66E-25 T 14-10-2018 IPR035906 MetI-like superfamily DA442_00265 eabb4de582a22f020b62a8ff97c42986 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 315 4.2E-29 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DA442_00265 eabb4de582a22f020b62a8ff97c42986 318 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 75 1.5E-8 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DA442_04595 ca80f34bafd823a1039694b7ed7bea5d 286 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DA442_04595 ca80f34bafd823a1039694b7ed7bea5d 286 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 38.077 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DA442_04595 ca80f34bafd823a1039694b7ed7bea5d 286 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 2.0E-69 T 14-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DA442_04595 ca80f34bafd823a1039694b7ed7bea5d 286 SUPERFAMILY SSF53223 1 122 5.08E-40 T 14-10-2018 DA442_04595 ca80f34bafd823a1039694b7ed7bea5d 286 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 121 7.7E-39 T 14-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DA442_04595 ca80f34bafd823a1039694b7ed7bea5d 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 3.1E-89 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DA442_04595 ca80f34bafd823a1039694b7ed7bea5d 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 3.1E-89 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DA442_04595 ca80f34bafd823a1039694b7ed7bea5d 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 3.1E-89 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DA442_04595 ca80f34bafd823a1039694b7ed7bea5d 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 3.1E-89 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DA442_04595 ca80f34bafd823a1039694b7ed7bea5d 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 3.1E-89 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DA442_04595 ca80f34bafd823a1039694b7ed7bea5d 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 3.1E-89 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DA442_04595 ca80f34bafd823a1039694b7ed7bea5d 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 3.1E-89 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DA442_04595 ca80f34bafd823a1039694b7ed7bea5d 286 SUPERFAMILY SSF51735 123 280 4.63E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_04595 ca80f34bafd823a1039694b7ed7bea5d 286 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DA442_04595 ca80f34bafd823a1039694b7ed7bea5d 286 Gene3D G3DSA:3.40.50.720 6 259 2.3E-108 T 14-10-2018 DA442_04595 ca80f34bafd823a1039694b7ed7bea5d 286 Gene3D G3DSA:3.40.50.10860 8 276 2.3E-108 T 14-10-2018 DA442_06515 80bb700fbd3a7863d9b251846394fb01 1012 SUPERFAMILY SSF55103 252 538 3.27E-53 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 DA442_06515 80bb700fbd3a7863d9b251846394fb01 1012 Pfam PF02913 FAD linked oxidases, C-terminal domain 276 534 9.7E-62 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 DA442_06515 80bb700fbd3a7863d9b251846394fb01 1012 SUPERFAMILY SSF46548 571 685 5.1E-7 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DA442_06515 80bb700fbd3a7863d9b251846394fb01 1012 SUPERFAMILY SSF56176 24 277 9.4E-52 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DA442_06515 80bb700fbd3a7863d9b251846394fb01 1012 Pfam PF01565 FAD binding domain 52 191 1.4E-36 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 DA442_06515 80bb700fbd3a7863d9b251846394fb01 1012 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 667 678 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DA442_06515 80bb700fbd3a7863d9b251846394fb01 1012 Gene3D G3DSA:3.30.465.40 16 212 2.3E-48 T 14-10-2018 DA442_06515 80bb700fbd3a7863d9b251846394fb01 1012 Pfam PF13183 4Fe-4S dicluster domain 570 681 5.0E-12 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DA442_11200 05bb23d4a041782cb343a07537a369b8 304 SMART SM00342 217 300 8.1E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_11200 05bb23d4a041782cb343a07537a369b8 304 Pfam PF12833 Helix-turn-helix domain 223 302 2.2E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_11200 05bb23d4a041782cb343a07537a369b8 304 Gene3D G3DSA:1.10.10.60 202 304 1.7E-26 T 14-10-2018 DA442_11200 05bb23d4a041782cb343a07537a369b8 304 Pfam PF01965 DJ-1/PfpI family 58 162 5.1E-10 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 DA442_11200 05bb23d4a041782cb343a07537a369b8 304 SUPERFAMILY SSF46689 253 303 1.43E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_11200 05bb23d4a041782cb343a07537a369b8 304 SUPERFAMILY SSF52317 6 180 3.44E-26 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DA442_11200 05bb23d4a041782cb343a07537a369b8 304 SUPERFAMILY SSF46689 203 251 7.26E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_11200 05bb23d4a041782cb343a07537a369b8 304 Gene3D G3DSA:3.40.50.880 2 190 2.7E-33 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DA442_17325 55ca7751ba0e80ffaa089a3b44850af4 172 PIRSF PIRSF004749 1 172 5.0E-57 T 14-10-2018 IPR023635 Peptide deformylase DA442_17325 55ca7751ba0e80ffaa089a3b44850af4 172 SUPERFAMILY SSF56420 3 165 4.19E-63 T 14-10-2018 IPR036821 Peptide deformylase superfamily DA442_17325 55ca7751ba0e80ffaa089a3b44850af4 172 PRINTS PR01576 Peptide deformylase signature 33 62 7.5E-38 T 14-10-2018 IPR023635 Peptide deformylase DA442_17325 55ca7751ba0e80ffaa089a3b44850af4 172 PRINTS PR01576 Peptide deformylase signature 101 119 7.5E-38 T 14-10-2018 IPR023635 Peptide deformylase DA442_17325 55ca7751ba0e80ffaa089a3b44850af4 172 PRINTS PR01576 Peptide deformylase signature 120 149 7.5E-38 T 14-10-2018 IPR023635 Peptide deformylase DA442_17325 55ca7751ba0e80ffaa089a3b44850af4 172 PRINTS PR01576 Peptide deformylase signature 89 100 7.5E-38 T 14-10-2018 IPR023635 Peptide deformylase DA442_17325 55ca7751ba0e80ffaa089a3b44850af4 172 Hamap MF_00163 Peptide deformylase [def]. 2 162 31.079 T 14-10-2018 IPR023635 Peptide deformylase DA442_17325 55ca7751ba0e80ffaa089a3b44850af4 172 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 159 3.5E-62 T 14-10-2018 IPR023635 Peptide deformylase DA442_17325 55ca7751ba0e80ffaa089a3b44850af4 172 Pfam PF01327 Polypeptide deformylase 4 152 1.1E-50 T 14-10-2018 IPR023635 Peptide deformylase DA442_17325 55ca7751ba0e80ffaa089a3b44850af4 172 Gene3D G3DSA:3.90.45.10 1 169 6.6E-67 T 14-10-2018 IPR036821 Peptide deformylase superfamily DA442_08885 de00703e2eac6723419abf1c10a766f1 138 Gene3D G3DSA:2.60.40.2990 24 133 4.3E-5 T 14-10-2018 DA442_08885 de00703e2eac6723419abf1c10a766f1 138 TIGRFAM TIGR02567 YscW: type III secretion system chaperone YscW 9 138 2.3E-54 T 14-10-2018 IPR013400 Type III secretion system chaperone, YscW DA442_08885 de00703e2eac6723419abf1c10a766f1 138 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 32 129 1.3E-14 T 14-10-2018 IPR039366 YscW/ExsB DA442_18315 85e8a3e2d80ccfbb8d030861f449cd47 356 Gene3D G3DSA:3.40.50.410 105 306 5.7E-52 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily DA442_18315 85e8a3e2d80ccfbb8d030861f449cd47 356 SUPERFAMILY SSF53300 103 302 1.08E-35 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily DA442_18315 85e8a3e2d80ccfbb8d030861f449cd47 356 Pfam PF00092 von Willebrand factor type A domain 107 297 2.6E-25 T 14-10-2018 IPR002035 von Willebrand factor, type A DA442_18315 85e8a3e2d80ccfbb8d030861f449cd47 356 SMART SM00327 105 306 2.6E-24 T 14-10-2018 IPR002035 von Willebrand factor, type A DA442_07675 30b60e83cc7fe23a89e92e5f75261e5a 200 SUPERFAMILY SSF51197 3 81 5.63E-5 T 14-10-2018 DA442_07675 30b60e83cc7fe23a89e92e5f75261e5a 200 Gene3D G3DSA:2.60.120.620 1 189 4.2E-54 T 14-10-2018 DA442_07675 30b60e83cc7fe23a89e92e5f75261e5a 200 SMART SM00702 11 187 5.2E-35 T 14-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 DA442_07675 30b60e83cc7fe23a89e92e5f75261e5a 200 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 97 187 2.1E-21 T 14-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 DA442_21655 88e64e64efff48c0ef90f551cca0a9da 446 Gene3D G3DSA:2.40.50.100 76 130 2.8E-7 T 14-10-2018 DA442_21655 88e64e64efff48c0ef90f551cca0a9da 446 SUPERFAMILY SSF111369 72 127 1.44E-5 T 14-10-2018 DA442_21655 88e64e64efff48c0ef90f551cca0a9da 446 Gene3D G3DSA:2.40.50.100 302 338 7.9E-16 T 14-10-2018 DA442_21655 88e64e64efff48c0ef90f551cca0a9da 446 Pfam PF13437 HlyD family secretion protein 302 404 5.5E-18 T 14-10-2018 DA442_21655 88e64e64efff48c0ef90f551cca0a9da 446 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 30 446 3.1E-100 T 14-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 DA442_21655 88e64e64efff48c0ef90f551cca0a9da 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 347 371 3.0E-40 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DA442_21655 88e64e64efff48c0ef90f551cca0a9da 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 425 445 3.0E-40 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DA442_21655 88e64e64efff48c0ef90f551cca0a9da 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 314 335 3.0E-40 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DA442_21655 88e64e64efff48c0ef90f551cca0a9da 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 81 101 3.0E-40 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DA442_21655 88e64e64efff48c0ef90f551cca0a9da 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 39 62 3.0E-40 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DA442_21655 88e64e64efff48c0ef90f551cca0a9da 446 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 371 394 3.0E-40 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 DA442_21655 88e64e64efff48c0ef90f551cca0a9da 446 Gene3D G3DSA:1.10.287.470 227 301 7.9E-16 T 14-10-2018 DA442_21655 88e64e64efff48c0ef90f551cca0a9da 446 Pfam PF13533 Biotin-lipoyl like 79 115 2.7E-7 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain DA442_21655 88e64e64efff48c0ef90f551cca0a9da 446 Gene3D G3DSA:2.40.30.170 339 422 7.9E-16 T 14-10-2018 DA442_14755 0b000ecf8ed146ead46e92c4dd81dbaa 187 SUPERFAMILY SSF143456 1 187 8.37E-68 T 14-10-2018 DA442_14755 0b000ecf8ed146ead46e92c4dd81dbaa 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 39.625 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 DA442_14755 0b000ecf8ed146ead46e92c4dd81dbaa 187 Gene3D G3DSA:3.40.1740.10 1 187 6.7E-70 T 14-10-2018 DA442_14755 0b000ecf8ed146ead46e92c4dd81dbaa 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 5.9E-51 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 DA442_17620 d979041072884e9e71b07b5e6728e1a6 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 14-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_17620 d979041072884e9e71b07b5e6728e1a6 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 43 3.8E-26 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_17620 d979041072884e9e71b07b5e6728e1a6 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.4 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_17620 d979041072884e9e71b07b5e6728e1a6 44 Pfam PF00468 Ribosomal protein L34 1 43 4.9E-24 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_17620 d979041072884e9e71b07b5e6728e1a6 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 39 1.0E-14 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_12265 faac524d572255c77dd28b2defe277a1 439 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 19 439 4.8E-129 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) DA442_12265 faac524d572255c77dd28b2defe277a1 439 SUPERFAMILY SSF56935 26 439 2.99E-100 T 14-10-2018 DA442_12265 faac524d572255c77dd28b2defe277a1 439 Gene3D G3DSA:2.40.160.60 26 439 2.5E-123 T 14-10-2018 DA442_10955 0529ea3ea7982676374d3c9aae136390 610 SMART SM00465 17 98 4.2E-23 T 14-10-2018 IPR000305 GIY-YIG endonuclease DA442_10955 0529ea3ea7982676374d3c9aae136390 610 SUPERFAMILY SSF47781 521 609 3.5E-19 T 14-10-2018 IPR010994 RuvA domain 2-like DA442_10955 0529ea3ea7982676374d3c9aae136390 610 Gene3D G3DSA:3.30.420.340 380 552 3.5E-45 T 14-10-2018 IPR038476 UvrC homology region 2 superfamily DA442_10955 0529ea3ea7982676374d3c9aae136390 610 Gene3D G3DSA:1.10.150.20 555 610 1.1E-24 T 14-10-2018 DA442_10955 0529ea3ea7982676374d3c9aae136390 610 SUPERFAMILY SSF46600 190 243 3.4E-13 T 14-10-2018 IPR036876 UVR domain superfamily DA442_10955 0529ea3ea7982676374d3c9aae136390 610 Gene3D G3DSA:3.40.1440.10 6 102 5.1E-31 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 DA442_10955 0529ea3ea7982676374d3c9aae136390 610 SMART SM00278 556 575 0.24 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DA442_10955 0529ea3ea7982676374d3c9aae136390 610 SMART SM00278 588 607 300.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DA442_10955 0529ea3ea7982676374d3c9aae136390 610 Pfam PF14520 Helix-hairpin-helix domain 558 609 3.1E-9 T 14-10-2018 DA442_10955 0529ea3ea7982676374d3c9aae136390 610 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 387 542 4.7E-43 T 14-10-2018 IPR001162 UvrC family homology region DA442_10955 0529ea3ea7982676374d3c9aae136390 610 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 607 28.666 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 DA442_10955 0529ea3ea7982676374d3c9aae136390 610 SUPERFAMILY SSF82771 16 100 4.58E-23 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 DA442_10955 0529ea3ea7982676374d3c9aae136390 610 Pfam PF02151 UvrB/uvrC motif 205 238 1.2E-8 T 14-10-2018 IPR001943 UVR domain GO:0005515 DA442_10955 0529ea3ea7982676374d3c9aae136390 610 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 9 589 4.5E-215 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 DA442_10955 0529ea3ea7982676374d3c9aae136390 610 Pfam PF01541 GIY-YIG catalytic domain 18 93 3.4E-12 T 14-10-2018 IPR000305 GIY-YIG endonuclease DA442_20500 b27161691b337cf9662c9fd9081d8a01 699 Gene3D G3DSA:2.40.50.100 614 679 2.9E-20 T 14-10-2018 DA442_20500 b27161691b337cf9662c9fd9081d8a01 699 SUPERFAMILY SSF51230 605 679 6.54E-19 T 14-10-2018 IPR011053 Single hybrid motif DA442_20500 b27161691b337cf9662c9fd9081d8a01 699 SUPERFAMILY SSF51246 344 463 7.85E-37 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 DA442_20500 b27161691b337cf9662c9fd9081d8a01 699 SUPERFAMILY SSF52440 13 126 1.01E-49 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DA442_20500 b27161691b337cf9662c9fd9081d8a01 699 Pfam PF02785 Biotin carboxylase C-terminal domain 349 460 2.3E-37 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DA442_20500 b27161691b337cf9662c9fd9081d8a01 699 Gene3D G3DSA:3.30.470.130 9 469 1.1E-199 T 14-10-2018 DA442_20500 b27161691b337cf9662c9fd9081d8a01 699 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 166 180 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DA442_20500 b27161691b337cf9662c9fd9081d8a01 699 SMART SM00878 349 461 8.7E-52 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DA442_20500 b27161691b337cf9662c9fd9081d8a01 699 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 299 306 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DA442_20500 b27161691b337cf9662c9fd9081d8a01 699 Pfam PF00289 Biotin carboxylase, N-terminal domain 14 123 5.7E-45 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DA442_20500 b27161691b337cf9662c9fd9081d8a01 699 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 636 653 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DA442_20500 b27161691b337cf9662c9fd9081d8a01 699 SUPERFAMILY SSF56059 96 356 2.65E-69 T 14-10-2018 DA442_20500 b27161691b337cf9662c9fd9081d8a01 699 Pfam PF00364 Biotin-requiring enzyme 620 678 7.4E-15 T 14-10-2018 IPR000089 Biotin/lipoyl attachment DA442_20500 b27161691b337cf9662c9fd9081d8a01 699 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 129 335 2.1E-80 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DA442_16570 944c1b7d6fd502ed9133841e31f6738b 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 7.3E-29 T 14-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DA442_16570 944c1b7d6fd502ed9133841e31f6738b 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 224 1.8E-7 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DA442_16570 944c1b7d6fd502ed9133841e31f6738b 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 338 454 8.1E-17 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DA442_16570 944c1b7d6fd502ed9133841e31f6738b 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 14-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DA442_16570 944c1b7d6fd502ed9133841e31f6738b 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1338 0.0 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DA442_16570 944c1b7d6fd502ed9133841e31f6738b 1342 Gene3D G3DSA:2.40.270.10 790 833 1.1E-6 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DA442_16570 944c1b7d6fd502ed9133841e31f6738b 1342 Gene3D G3DSA:3.90.1100.10 416 626 1.6E-71 T 14-10-2018 DA442_16570 944c1b7d6fd502ed9133841e31f6738b 1342 Gene3D G3DSA:3.90.1100.10 19 156 3.4E-48 T 14-10-2018 DA442_16570 944c1b7d6fd502ed9133841e31f6738b 1342 Gene3D G3DSA:3.90.1100.10 646 713 1.8E-21 T 14-10-2018 DA442_16570 944c1b7d6fd502ed9133841e31f6738b 1342 Gene3D G3DSA:2.40.50.100 714 788 3.6E-32 T 14-10-2018 DA442_16570 944c1b7d6fd502ed9133841e31f6738b 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1263 9.9E-157 T 14-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DA442_16570 944c1b7d6fd502ed9133841e31f6738b 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1341 12.286 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DA442_16570 944c1b7d6fd502ed9133841e31f6738b 1342 SUPERFAMILY SSF64484 11 1341 0.0 T 14-10-2018 DA442_16570 944c1b7d6fd502ed9133841e31f6738b 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1265 1339 3.0E-27 T 14-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DA442_16570 944c1b7d6fd502ed9133841e31f6738b 1342 Gene3D G3DSA:3.90.1800.10 1251 1305 8.1E-11 T 14-10-2018 DA442_16570 944c1b7d6fd502ed9133841e31f6738b 1342 Gene3D G3DSA:2.40.270.10 1035 1241 1.1E-87 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DA442_16570 944c1b7d6fd502ed9133841e31f6738b 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 1.1E-57 T 14-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DA442_16570 944c1b7d6fd502ed9133841e31f6738b 1342 Gene3D G3DSA:3.90.1110.10 157 271 1.1E-27 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DA442_16570 944c1b7d6fd502ed9133841e31f6738b 1342 Gene3D G3DSA:2.40.50.150 834 954 2.6E-44 T 14-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DA442_16570 944c1b7d6fd502ed9133841e31f6738b 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 1.2E-22 T 14-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DA442_18060 4c546afa884a375074813628eaf61420 293 Pfam PF03466 LysR substrate binding domain 108 276 4.6E-10 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_18060 4c546afa884a375074813628eaf61420 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 1.3E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_18060 4c546afa884a375074813628eaf61420 293 Gene3D G3DSA:3.40.190.10 152 250 3.8E-21 T 14-10-2018 DA442_18060 4c546afa884a375074813628eaf61420 293 SUPERFAMILY SSF46785 3 84 2.79E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_18060 4c546afa884a375074813628eaf61420 293 SUPERFAMILY SSF53850 106 276 1.16E-23 T 14-10-2018 DA442_18060 4c546afa884a375074813628eaf61420 293 Gene3D G3DSA:1.10.10.10 1 88 1.4E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_18060 4c546afa884a375074813628eaf61420 293 Gene3D G3DSA:3.40.190.10 106 269 3.8E-21 T 14-10-2018 DA442_18060 4c546afa884a375074813628eaf61420 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 3.0E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_18060 4c546afa884a375074813628eaf61420 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 3.0E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_18060 4c546afa884a375074813628eaf61420 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 3.0E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_22125 f46c39eb8536488edd81c5f5e9d883e2 118 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 12 117 8.2E-15 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 DA442_22125 f46c39eb8536488edd81c5f5e9d883e2 118 Pfam PF02049 Flagellar hook-basal body complex protein FliE 40 118 6.1E-24 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 DA442_22125 f46c39eb8536488edd81c5f5e9d883e2 118 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 48 64 2.2E-10 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 DA442_22125 f46c39eb8536488edd81c5f5e9d883e2 118 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 82 98 2.2E-10 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 DA442_22125 f46c39eb8536488edd81c5f5e9d883e2 118 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 103 116 2.2E-10 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 DA442_22125 f46c39eb8536488edd81c5f5e9d883e2 118 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 17 118 15.205 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 DA442_20455 1a5685fd1b7c4b5c911f64589c227cbd 376 SUPERFAMILY SSF52096 18 339 2.19E-54 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DA442_20455 1a5685fd1b7c4b5c911f64589c227cbd 376 Pfam PF16113 Enoyl-CoA hydratase/isomerase 18 356 4.5E-105 T 14-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 DA442_20455 1a5685fd1b7c4b5c911f64589c227cbd 376 Gene3D G3DSA:3.90.226.10 4 371 1.9E-113 T 14-10-2018 DA442_11275 59e28a319fc1c7305775bcd8035d769d 298 Gene3D G3DSA:3.40.190.290 95 295 2.1E-58 T 14-10-2018 DA442_11275 59e28a319fc1c7305775bcd8035d769d 298 Pfam PF03466 LysR substrate binding domain 91 295 7.0E-36 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_11275 59e28a319fc1c7305775bcd8035d769d 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_11275 59e28a319fc1c7305775bcd8035d769d 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_11275 59e28a319fc1c7305775bcd8035d769d 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_11275 59e28a319fc1c7305775bcd8035d769d 298 SUPERFAMILY SSF53850 90 297 3.72E-41 T 14-10-2018 DA442_11275 59e28a319fc1c7305775bcd8035d769d 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 2.0E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_11275 59e28a319fc1c7305775bcd8035d769d 298 Gene3D G3DSA:1.10.10.10 5 94 7.9E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_11275 59e28a319fc1c7305775bcd8035d769d 298 SUPERFAMILY SSF46785 6 87 3.27E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_15940 8434a290cf3eb3d05d37fd3d55ae0659 438 Gene3D G3DSA:3.40.440.10 6 249 2.5E-107 T 14-10-2018 DA442_15940 8434a290cf3eb3d05d37fd3d55ae0659 438 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 431 1.3E-192 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DA442_15940 8434a290cf3eb3d05d37fd3d55ae0659 438 Pfam PF00709 Adenylosuccinate synthetase 5 430 5.2E-178 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DA442_15940 8434a290cf3eb3d05d37fd3d55ae0659 438 SMART SM00788 4 431 0.0 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DA442_15940 8434a290cf3eb3d05d37fd3d55ae0659 438 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 14-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DA442_15940 8434a290cf3eb3d05d37fd3d55ae0659 438 Gene3D G3DSA:1.10.300.10 102 201 2.5E-107 T 14-10-2018 DA442_15940 8434a290cf3eb3d05d37fd3d55ae0659 438 SUPERFAMILY SSF52540 3 436 2.44E-179 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_15940 8434a290cf3eb3d05d37fd3d55ae0659 438 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 438 220.136 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DA442_15940 8434a290cf3eb3d05d37fd3d55ae0659 438 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 14-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DA442_15940 8434a290cf3eb3d05d37fd3d55ae0659 438 Gene3D G3DSA:3.90.170.10 267 438 2.0E-66 T 14-10-2018 DA442_21345 acf017ec89e612ab627f55bfc2e37e79 389 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 280 370 1.8E-22 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DA442_21345 acf017ec89e612ab627f55bfc2e37e79 389 Gene3D G3DSA:2.60.410.10 280 370 1.2E-27 T 14-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DA442_21345 acf017ec89e612ab627f55bfc2e37e79 389 SUPERFAMILY SSF56601 9 280 1.63E-84 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DA442_21345 acf017ec89e612ab627f55bfc2e37e79 389 Gene3D G3DSA:3.40.710.10 19 278 5.1E-90 T 14-10-2018 DA442_21345 acf017ec89e612ab627f55bfc2e37e79 389 SMART SM00936 280 370 1.1E-28 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DA442_21345 acf017ec89e612ab627f55bfc2e37e79 389 SUPERFAMILY SSF69189 280 372 5.49E-25 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DA442_21345 acf017ec89e612ab627f55bfc2e37e79 389 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 30 260 8.1E-85 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 DA442_21345 acf017ec89e612ab627f55bfc2e37e79 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 146 159 7.3E-18 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DA442_21345 acf017ec89e612ab627f55bfc2e37e79 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 119 136 7.3E-18 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DA442_21345 acf017ec89e612ab627f55bfc2e37e79 389 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 63 74 7.3E-18 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DA442_01640 0827b1bc907a0b2f3477eb194febff88 242 Pfam PF00005 ABC transporter 30 185 7.6E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_01640 0827b1bc907a0b2f3477eb194febff88 242 SMART SM00382 35 233 3.4E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_01640 0827b1bc907a0b2f3477eb194febff88 242 SUPERFAMILY SSF52540 8 229 2.72E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_01640 0827b1bc907a0b2f3477eb194febff88 242 Gene3D G3DSA:3.40.50.300 6 237 9.0E-53 T 14-10-2018 DA442_18075 f586ed23272a3d7210d22691c78f2179 229 SUPERFAMILY SSF161098 10 202 5.63E-38 T 14-10-2018 IPR035906 MetI-like superfamily DA442_18075 f586ed23272a3d7210d22691c78f2179 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 9 111 1.4E-16 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DA442_18075 f586ed23272a3d7210d22691c78f2179 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 216 8.8E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DA442_18075 f586ed23272a3d7210d22691c78f2179 229 Gene3D G3DSA:1.10.3720.10 2 218 6.9E-47 T 14-10-2018 IPR035906 MetI-like superfamily DA442_17840 19fc615a7738c967dc92ec5038ff25f9 328 SUPERFAMILY SSF52540 4 171 2.02E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_17840 19fc615a7738c967dc92ec5038ff25f9 328 Gene3D G3DSA:3.40.50.300 2 197 1.7E-45 T 14-10-2018 DA442_17840 19fc615a7738c967dc92ec5038ff25f9 328 SMART SM00833 241 324 5.8E-4 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal DA442_17840 19fc615a7738c967dc92ec5038ff25f9 328 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 176 3.6E-42 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain DA442_11855 dc063dc0c965ad27f57d43834be4ea3d 227 Pfam PF00106 short chain dehydrogenase 7 191 3.2E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_11855 dc063dc0c965ad27f57d43834be4ea3d 227 SUPERFAMILY SSF51735 1 209 2.55E-20 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_11855 dc063dc0c965ad27f57d43834be4ea3d 227 Gene3D G3DSA:3.40.50.720 1 220 1.3E-20 T 14-10-2018 DA442_07410 94338d7d3a813d17f0e1c79428ad30a4 509 Gene3D G3DSA:3.40.630.10 47 253 2.6E-44 T 14-10-2018 DA442_07410 94338d7d3a813d17f0e1c79428ad30a4 509 SUPERFAMILY SSF55031 251 398 1.66E-10 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DA442_07410 94338d7d3a813d17f0e1c79428ad30a4 509 Pfam PF07687 Peptidase dimerisation domain 247 399 8.2E-17 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain DA442_07410 94338d7d3a813d17f0e1c79428ad30a4 509 Pfam PF01546 Peptidase family M20/M25/M40 125 503 2.7E-36 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 DA442_07410 94338d7d3a813d17f0e1c79428ad30a4 509 SUPERFAMILY SSF53187 46 506 1.86E-48 T 14-10-2018 DA442_25260 f16fcb20f3a38d0d564b8dec11e79044 301 Pfam PF05661 Protein of unknown function (DUF808) 4 291 3.9E-113 T 14-10-2018 IPR008526 Inner membrane protein YedI DA442_25260 f16fcb20f3a38d0d564b8dec11e79044 301 PIRSF PIRSF016660 1 301 1.6E-119 T 14-10-2018 IPR008526 Inner membrane protein YedI DA442_02330 0c045c7748906b02c6f5c3c4e6a23cb0 105 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 23 102 2.9E-25 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 DA442_02330 0c045c7748906b02c6f5c3c4e6a23cb0 105 Pfam PF04999 Cell division protein FtsL 8 103 8.7E-36 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 DA442_02330 0c045c7748906b02c6f5c3c4e6a23cb0 105 Hamap MF_00910 Cell division protein FtsL [ftsL]. 19 102 16.111 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 DA442_16255 c66a7a9656b6df2930b1712101f3170c 159 Pfam PF00588 SpoU rRNA Methylase family 3 146 4.1E-34 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 DA442_16255 c66a7a9656b6df2930b1712101f3170c 159 Gene3D G3DSA:3.40.1280.10 1 159 9.3E-65 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DA442_16255 c66a7a9656b6df2930b1712101f3170c 159 SUPERFAMILY SSF75217 2 157 2.94E-43 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases DA442_16255 c66a7a9656b6df2930b1712101f3170c 159 PIRSF PIRSF029256 1 159 2.6E-66 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 DA442_16255 c66a7a9656b6df2930b1712101f3170c 159 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 157 1.1E-58 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 DA442_16255 c66a7a9656b6df2930b1712101f3170c 159 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 156 32.755 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 DA442_24050 518ab2410850f61f81cd2d19be1baaad 331 SUPERFAMILY SSF56935 22 331 7.63E-43 T 14-10-2018 DA442_24050 518ab2410850f61f81cd2d19be1baaad 331 PRINTS PR00183 E.coli/Salmonella-type porin signature 295 314 6.0E-5 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 DA442_24050 518ab2410850f61f81cd2d19be1baaad 331 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 6.0E-5 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 DA442_24050 518ab2410850f61f81cd2d19be1baaad 331 PRINTS PR00183 E.coli/Salmonella-type porin signature 93 115 6.0E-5 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 DA442_24050 518ab2410850f61f81cd2d19be1baaad 331 Gene3D G3DSA:2.40.160.10 22 331 4.1E-43 T 14-10-2018 IPR023614 Porin domain superfamily DA442_24735 8c5df24485af69d022bcee144c3acbc9 160 Gene3D G3DSA:3.30.1060.10 1 155 1.1E-42 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DA442_24735 8c5df24485af69d022bcee144c3acbc9 160 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 2 152 27.149 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DA442_24735 8c5df24485af69d022bcee144c3acbc9 160 SUPERFAMILY SSF55068 2 149 1.44E-50 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DA442_24735 8c5df24485af69d022bcee144c3acbc9 160 Pfam PF01625 Peptide methionine sulfoxide reductase 5 147 2.1E-44 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DA442_24735 8c5df24485af69d022bcee144c3acbc9 160 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 3 146 9.5E-33 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DA442_01720 4f3b915ec85878b4bf28b2e20c4c0f3c 528 SUPERFAMILY SSF161098 18 257 2.88E-41 T 14-10-2018 IPR035906 MetI-like superfamily DA442_01720 4f3b915ec85878b4bf28b2e20c4c0f3c 528 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 8 518 2.9E-161 T 14-10-2018 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 DA442_01720 4f3b915ec85878b4bf28b2e20c4c0f3c 528 SUPERFAMILY SSF161098 283 521 6.02E-33 T 14-10-2018 IPR035906 MetI-like superfamily DA442_01720 4f3b915ec85878b4bf28b2e20c4c0f3c 528 Gene3D G3DSA:1.10.3720.10 6 261 2.2E-42 T 14-10-2018 IPR035906 MetI-like superfamily DA442_01720 4f3b915ec85878b4bf28b2e20c4c0f3c 528 Gene3D G3DSA:1.10.3720.10 282 527 6.4E-29 T 14-10-2018 IPR035906 MetI-like superfamily DA442_01720 4f3b915ec85878b4bf28b2e20c4c0f3c 528 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 64 256 4.6E-8 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DA442_01720 4f3b915ec85878b4bf28b2e20c4c0f3c 528 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 356 512 4.3E-7 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DA442_12460 ff9905b49b116abcb7862a3fa4d90ea2 343 Pfam PF13188 PAS domain 18 72 3.6E-6 T 14-10-2018 IPR000014 PAS domain DA442_12460 ff9905b49b116abcb7862a3fa4d90ea2 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 268 282 8.4E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_12460 ff9905b49b116abcb7862a3fa4d90ea2 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 286 296 8.4E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_12460 ff9905b49b116abcb7862a3fa4d90ea2 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 321 334 8.4E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_12460 ff9905b49b116abcb7862a3fa4d90ea2 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 297 315 8.4E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_12460 ff9905b49b116abcb7862a3fa4d90ea2 343 Gene3D G3DSA:3.30.565.10 190 342 1.8E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_12460 ff9905b49b116abcb7862a3fa4d90ea2 343 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 336 1.2E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_12460 ff9905b49b116abcb7862a3fa4d90ea2 343 SMART SM00387 231 337 5.9E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_12460 ff9905b49b116abcb7862a3fa4d90ea2 343 Gene3D G3DSA:1.10.287.130 105 185 2.8E-9 T 14-10-2018 DA442_12460 ff9905b49b116abcb7862a3fa4d90ea2 343 SUPERFAMILY SSF55785 18 85 2.62E-6 T 14-10-2018 IPR035965 PAS domain superfamily DA442_12460 ff9905b49b116abcb7862a3fa4d90ea2 343 SMART SM00388 122 188 1.4E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_12460 ff9905b49b116abcb7862a3fa4d90ea2 343 SUPERFAMILY SSF47384 111 188 2.94E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DA442_12460 ff9905b49b116abcb7862a3fa4d90ea2 343 Pfam PF00512 His Kinase A (phospho-acceptor) domain 122 186 1.3E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_12460 ff9905b49b116abcb7862a3fa4d90ea2 343 SUPERFAMILY SSF55874 177 336 3.54E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_14200 c27f18c01dd437951c705c597d73a440 556 Gene3D G3DSA:3.30.750.24 428 550 1.2E-13 T 14-10-2018 IPR036513 STAS domain superfamily DA442_14200 c27f18c01dd437951c705c597d73a440 556 SUPERFAMILY SSF52091 439 541 1.37E-10 T 14-10-2018 IPR036513 STAS domain superfamily DA442_14200 c27f18c01dd437951c705c597d73a440 556 Pfam PF00916 Sulfate permease family 11 376 1.2E-85 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 DA442_14200 c27f18c01dd437951c705c597d73a440 556 Pfam PF01740 STAS domain 440 533 4.8E-12 T 14-10-2018 IPR002645 STAS domain DA442_14830 c86c2a85447d37730ca880edd2a23b32 90 SUPERFAMILY SSF111148 1 89 8.89E-41 T 14-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 DA442_14830 c86c2a85447d37730ca880edd2a23b32 90 PIRSF PIRSF029827 1 90 1.3E-43 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 DA442_14830 c86c2a85447d37730ca880edd2a23b32 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 2.6E-42 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 DA442_14830 c86c2a85447d37730ca880edd2a23b32 90 Gene3D G3DSA:1.10.3880.10 1 90 1.8E-39 T 14-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 DA442_14830 c86c2a85447d37730ca880edd2a23b32 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 1.0E-39 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 DA442_14830 c86c2a85447d37730ca880edd2a23b32 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.452 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 DA442_12150 ea77d6f35e6ec8a89bc2b8f1833614da 337 SUPERFAMILY SSF51735 5 159 1.2E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_12150 ea77d6f35e6ec8a89bc2b8f1833614da 337 SMART SM00859 6 121 2.7E-41 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DA442_12150 ea77d6f35e6ec8a89bc2b8f1833614da 337 SUPERFAMILY SSF55347 131 320 1.07E-78 T 14-10-2018 DA442_12150 ea77d6f35e6ec8a89bc2b8f1833614da 337 Gene3D G3DSA:3.40.50.720 7 330 2.9E-153 T 14-10-2018 DA442_12150 ea77d6f35e6ec8a89bc2b8f1833614da 337 PIRSF PIRSF000148 4 337 2.1E-135 T 14-10-2018 DA442_12150 ea77d6f35e6ec8a89bc2b8f1833614da 337 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 334 2.9E-129 T 14-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DA442_12150 ea77d6f35e6ec8a89bc2b8f1833614da 337 Gene3D G3DSA:3.30.360.10 130 316 2.9E-153 T 14-10-2018 DA442_12150 ea77d6f35e6ec8a89bc2b8f1833614da 337 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 333 36.451 T 14-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DA442_12150 ea77d6f35e6ec8a89bc2b8f1833614da 337 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 232 246 - T 14-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DA442_12150 ea77d6f35e6ec8a89bc2b8f1833614da 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 319 7.2E-62 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DA442_12150 ea77d6f35e6ec8a89bc2b8f1833614da 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 120 6.6E-32 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DA442_23565 cfebdb074b756479f27ea12bea8d234d 265 SMART SM00346 15 104 8.1E-29 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DA442_23565 cfebdb074b756479f27ea12bea8d234d 265 Pfam PF09339 IclR helix-turn-helix domain 17 67 7.9E-13 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DA442_23565 cfebdb074b756479f27ea12bea8d234d 265 Pfam PF01614 Bacterial transcriptional regulator 131 256 4.3E-38 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal DA442_23565 cfebdb074b756479f27ea12bea8d234d 265 Gene3D G3DSA:1.10.10.10 2 82 3.4E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_23565 cfebdb074b756479f27ea12bea8d234d 265 SUPERFAMILY SSF55781 79 261 6.15E-51 T 14-10-2018 DA442_23565 cfebdb074b756479f27ea12bea8d234d 265 Gene3D G3DSA:3.30.450.40 88 265 7.8E-60 T 14-10-2018 IPR029016 GAF-like domain superfamily DA442_23565 cfebdb074b756479f27ea12bea8d234d 265 SUPERFAMILY SSF46785 15 85 5.88E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_23225 30050ce416a4d5dc05bdb2092c6280c7 368 TIGRFAM TIGR02464 ribofla_fusion: conserved hypothetical protein 20 159 1.2E-34 T 14-10-2018 IPR012816 NADAR DA442_23225 30050ce416a4d5dc05bdb2092c6280c7 368 SUPERFAMILY SSF143990 18 160 2.48E-51 T 14-10-2018 IPR037238 YbiA-like superfamily DA442_23225 30050ce416a4d5dc05bdb2092c6280c7 368 Gene3D G3DSA:1.10.357.40 10 166 1.5E-56 T 14-10-2018 IPR037238 YbiA-like superfamily DA442_23225 30050ce416a4d5dc05bdb2092c6280c7 368 Pfam PF00925 GTP cyclohydrolase II 173 335 9.2E-66 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DA442_23225 30050ce416a4d5dc05bdb2092c6280c7 368 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 172 358 3.5E-82 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DA442_23225 30050ce416a4d5dc05bdb2092c6280c7 368 Gene3D G3DSA:3.40.50.10990 167 338 8.8E-73 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DA442_23225 30050ce416a4d5dc05bdb2092c6280c7 368 SUPERFAMILY SSF142695 167 337 2.09E-65 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DA442_23225 30050ce416a4d5dc05bdb2092c6280c7 368 PIRSF PIRSF001259 1 368 4.2E-118 T 14-10-2018 DA442_23225 30050ce416a4d5dc05bdb2092c6280c7 368 Pfam PF08719 Domain of unknown function (DUF1768) 22 160 8.3E-36 T 14-10-2018 IPR012816 NADAR DA442_23225 30050ce416a4d5dc05bdb2092c6280c7 368 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 166 361 44.663 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DA442_17985 bfef875f856822d7b4b8195ff5c148fc 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 DA442_17985 bfef875f856822d7b4b8195ff5c148fc 384 PIRSF PIRSF016578 4 381 6.0E-24 T 14-10-2018 DA442_17985 bfef875f856822d7b4b8195ff5c148fc 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 377 6.4E-50 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 DA442_17985 bfef875f856822d7b4b8195ff5c148fc 384 SUPERFAMILY SSF47203 225 379 5.8E-60 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DA442_17985 bfef875f856822d7b4b8195ff5c148fc 384 Gene3D G3DSA:1.20.140.10 233 379 1.5E-54 T 14-10-2018 DA442_17985 bfef875f856822d7b4b8195ff5c148fc 384 Gene3D G3DSA:2.40.110.10 121 232 1.1E-41 T 14-10-2018 DA442_17985 bfef875f856822d7b4b8195ff5c148fc 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 9.7E-26 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 DA442_17985 bfef875f856822d7b4b8195ff5c148fc 384 Gene3D G3DSA:1.10.540.10 1 117 1.4E-35 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DA442_17985 bfef875f856822d7b4b8195ff5c148fc 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 1.9E-28 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 DA442_17985 bfef875f856822d7b4b8195ff5c148fc 384 SUPERFAMILY SSF56645 1 240 4.97E-80 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DA442_17985 bfef875f856822d7b4b8195ff5c148fc 384 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 DA442_24480 34d3690b1ff7608fa79011abb3593bcb 291 SUPERFAMILY SSF46785 3 82 2.9E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_24480 34d3690b1ff7608fa79011abb3593bcb 291 Gene3D G3DSA:1.10.10.10 1 84 2.3E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_24480 34d3690b1ff7608fa79011abb3593bcb 291 Gene3D G3DSA:3.40.190.10 87 283 3.8E-13 T 14-10-2018 DA442_24480 34d3690b1ff7608fa79011abb3593bcb 291 Gene3D G3DSA:3.40.190.10 168 259 3.8E-13 T 14-10-2018 DA442_24480 34d3690b1ff7608fa79011abb3593bcb 291 SUPERFAMILY SSF53850 87 286 1.56E-16 T 14-10-2018 DA442_24480 34d3690b1ff7608fa79011abb3593bcb 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 63 6.8E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_24480 34d3690b1ff7608fa79011abb3593bcb 291 Pfam PF03466 LysR substrate binding domain 92 286 1.5E-10 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_13795 1169d8e363292cd5a3f795cba2d850fd 413 Pfam PF00589 Phage integrase family 207 378 1.8E-12 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DA442_13795 1169d8e363292cd5a3f795cba2d850fd 413 Pfam PF13356 Arm DNA-binding domain 21 88 7.6E-14 T 14-10-2018 IPR025166 Integrase, DNA-binding domain DA442_13795 1169d8e363292cd5a3f795cba2d850fd 413 SUPERFAMILY SSF56349 99 388 1.77E-43 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DA442_13795 1169d8e363292cd5a3f795cba2d850fd 413 Gene3D G3DSA:3.30.160.390 1 89 4.4E-18 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily DA442_13795 1169d8e363292cd5a3f795cba2d850fd 413 Gene3D G3DSA:1.10.443.10 205 383 5.2E-13 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DA442_13795 1169d8e363292cd5a3f795cba2d850fd 413 Gene3D G3DSA:1.10.150.130 90 204 2.6E-16 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal DA442_17080 0816a04e2fe117c94c7c89d29cd801f4 108 PIRSF PIRSF000077 2 108 1.0E-42 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 DA442_17080 0816a04e2fe117c94c7c89d29cd801f4 108 Gene3D G3DSA:3.40.30.10 1 108 3.2E-35 T 14-10-2018 DA442_17080 0816a04e2fe117c94c7c89d29cd801f4 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 2.5E-37 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 DA442_17080 0816a04e2fe117c94c7c89d29cd801f4 108 PRINTS PR00421 Thioredoxin family signature 24 32 3.3E-10 T 14-10-2018 DA442_17080 0816a04e2fe117c94c7c89d29cd801f4 108 PRINTS PR00421 Thioredoxin family signature 72 83 3.3E-10 T 14-10-2018 DA442_17080 0816a04e2fe117c94c7c89d29cd801f4 108 PRINTS PR00421 Thioredoxin family signature 32 41 3.3E-10 T 14-10-2018 DA442_17080 0816a04e2fe117c94c7c89d29cd801f4 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 DA442_17080 0816a04e2fe117c94c7c89d29cd801f4 108 SUPERFAMILY SSF52833 3 107 1.66E-38 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_17080 0816a04e2fe117c94c7c89d29cd801f4 108 Pfam PF00085 Thioredoxin 5 106 7.7E-33 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 DA442_07735 dc0e1726d2a8d6fe961a338bec2c1316 163 SUPERFAMILY SSF54523 7 131 1.41E-10 T 14-10-2018 DA442_07735 dc0e1726d2a8d6fe961a338bec2c1316 163 Gene3D G3DSA:3.30.700.10 7 101 2.7E-9 T 14-10-2018 DA442_07735 dc0e1726d2a8d6fe961a338bec2c1316 163 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 1.4E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DA442_07735 dc0e1726d2a8d6fe961a338bec2c1316 163 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 27 3.5E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DA442_01645 ad1180eda60e5d69899eefd016cab26c 204 Pfam PF10986 Protein of unknown function (DUF2796) 29 199 1.7E-52 T 14-10-2018 IPR021253 Protein of unknown function DUF2796 DA442_01905 66eb428b75148d9511ca6f1fd907d3a3 626 SMART SM00267 454 619 8.1E-46 T 14-10-2018 IPR000160 GGDEF domain DA442_01905 66eb428b75148d9511ca6f1fd907d3a3 626 SUPERFAMILY SSF55073 470 618 5.1E-38 T 14-10-2018 IPR029787 Nucleotide cyclase DA442_01905 66eb428b75148d9511ca6f1fd907d3a3 626 SUPERFAMILY SSF103190 207 298 9.42E-26 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily DA442_01905 66eb428b75148d9511ca6f1fd907d3a3 626 Gene3D G3DSA:3.30.70.270 467 624 7.2E-42 T 14-10-2018 DA442_01905 66eb428b75148d9511ca6f1fd907d3a3 626 SUPERFAMILY SSF103190 36 206 1.49E-47 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily DA442_01905 66eb428b75148d9511ca6f1fd907d3a3 626 Pfam PF00990 Diguanylate cyclase, GGDEF domain 467 614 1.8E-34 T 14-10-2018 IPR000160 GGDEF domain DA442_01905 66eb428b75148d9511ca6f1fd907d3a3 626 Gene3D G3DSA:1.20.5.170 26 72 4.2E-27 T 14-10-2018 DA442_01905 66eb428b75148d9511ca6f1fd907d3a3 626 SUPERFAMILY SSF55785 352 462 3.59E-19 T 14-10-2018 IPR035965 PAS domain superfamily DA442_01905 66eb428b75148d9511ca6f1fd907d3a3 626 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 462 617 9.4E-38 T 14-10-2018 IPR000160 GGDEF domain DA442_01905 66eb428b75148d9511ca6f1fd907d3a3 626 Pfam PF02743 Cache domain 38 289 1.1E-15 T 14-10-2018 IPR033479 Double Cache domain 1 DA442_01905 66eb428b75148d9511ca6f1fd907d3a3 626 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 344 461 1.3E-13 T 14-10-2018 IPR000014 PAS domain DA442_01905 66eb428b75148d9511ca6f1fd907d3a3 626 Gene3D G3DSA:3.30.450.20 333 466 1.4E-21 T 14-10-2018 DA442_01905 66eb428b75148d9511ca6f1fd907d3a3 626 Gene3D G3DSA:3.30.450.20 207 302 7.1E-40 T 14-10-2018 DA442_01905 66eb428b75148d9511ca6f1fd907d3a3 626 Pfam PF13426 PAS domain 352 453 4.0E-10 T 14-10-2018 IPR000014 PAS domain DA442_01905 66eb428b75148d9511ca6f1fd907d3a3 626 Gene3D G3DSA:3.30.450.20 73 206 7.5E-42 T 14-10-2018 DA442_21955 b25d636019097bb4463a2ad26ea6c4b4 322 Pfam PF05229 Spore Coat Protein U domain 18 156 4.3E-14 T 14-10-2018 IPR007893 Spore coat protein U DA442_21955 b25d636019097bb4463a2ad26ea6c4b4 322 Pfam PF05229 Spore Coat Protein U domain 181 318 1.0E-31 T 14-10-2018 IPR007893 Spore coat protein U DA442_21955 b25d636019097bb4463a2ad26ea6c4b4 322 SMART SM00972 253 319 1.1E-9 T 14-10-2018 IPR007893 Spore coat protein U DA442_21955 b25d636019097bb4463a2ad26ea6c4b4 322 SMART SM00972 93 157 1.9E-9 T 14-10-2018 IPR007893 Spore coat protein U DA442_17195 13e7259ef4ea1a0875e9085167cbf0dc 67 Pfam PF02597 ThiS family 8 67 3.7E-13 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 DA442_17195 13e7259ef4ea1a0875e9085167cbf0dc 67 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 4 67 3.7E-17 T 14-10-2018 IPR010035 ThiS, thiamine-biosynthesis DA442_17195 13e7259ef4ea1a0875e9085167cbf0dc 67 Gene3D G3DSA:3.10.20.30 2 67 1.3E-17 T 14-10-2018 IPR012675 Beta-grasp domain superfamily DA442_17195 13e7259ef4ea1a0875e9085167cbf0dc 67 SUPERFAMILY SSF54285 3 67 9.6E-15 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp DA442_20345 bc52a75db5f9cbd33523ac2e8024fcb0 343 SUPERFAMILY SSF159245 125 294 1.16E-5 T 14-10-2018 DA442_20345 bc52a75db5f9cbd33523ac2e8024fcb0 343 Pfam PF10974 Protein of unknown function (DUF2804) 25 342 7.6E-86 T 14-10-2018 IPR021243 Protein of unknown function DUF2804 DA442_05860 d994fc96c81b5e4caf4e8abf3531964f 357 SUPERFAMILY SSF54211 254 344 3.04E-31 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DA442_05860 d994fc96c81b5e4caf4e8abf3531964f 357 Pfam PF08645 Polynucleotide kinase 3 phosphatase 6 133 4.4E-6 T 14-10-2018 IPR013954 Polynucleotide kinase 3 phosphatase Reactome: R-HSA-5649702 DA442_05860 d994fc96c81b5e4caf4e8abf3531964f 357 Gene3D G3DSA:3.40.50.1000 1 165 4.3E-48 T 14-10-2018 IPR023214 HAD superfamily DA442_05860 d994fc96c81b5e4caf4e8abf3531964f 357 SUPERFAMILY SSF56784 3 157 5.91E-40 T 14-10-2018 IPR036412 HAD-like superfamily DA442_05860 d994fc96c81b5e4caf4e8abf3531964f 357 Gene3D G3DSA:3.30.230.40 166 256 3.5E-36 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 DA442_05860 d994fc96c81b5e4caf4e8abf3531964f 357 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 321 333 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 DA442_05860 d994fc96c81b5e4caf4e8abf3531964f 357 Gene3D G3DSA:3.30.230.40 257 357 1.0E-36 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 DA442_05860 d994fc96c81b5e4caf4e8abf3531964f 357 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 4 357 51.169 T 14-10-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 DA442_05860 d994fc96c81b5e4caf4e8abf3531964f 357 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 5 164 1.6E-79 T 14-10-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 DA442_05860 d994fc96c81b5e4caf4e8abf3531964f 357 SUPERFAMILY SSF54211 169 253 2.78E-32 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DA442_05860 d994fc96c81b5e4caf4e8abf3531964f 357 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 228 241 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 DA442_05860 d994fc96c81b5e4caf4e8abf3531964f 357 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 198 339 2.7E-65 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 DA442_05860 d994fc96c81b5e4caf4e8abf3531964f 357 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 169 357 37.678 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 DA442_05860 d994fc96c81b5e4caf4e8abf3531964f 357 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 6 151 2.1E-28 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 DA442_05860 d994fc96c81b5e4caf4e8abf3531964f 357 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 147 5.5E-48 T 14-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 DA442_09280 08e201ec9c10f3af6921896d543a880c 494 Pfam PF03553 Na+/H+ antiporter family 226 494 2.0E-29 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 DA442_23955 ff6fa7662a508d406370fc73621137e3 317 Gene3D G3DSA:3.90.110.10 145 314 1.4E-44 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DA442_23955 ff6fa7662a508d406370fc73621137e3 317 SUPERFAMILY SSF51735 2 144 4.1E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_23955 ff6fa7662a508d406370fc73621137e3 317 Gene3D G3DSA:3.40.50.720 1 144 2.6E-41 T 14-10-2018 DA442_23955 ff6fa7662a508d406370fc73621137e3 317 PIRSF PIRSF000102 1 317 6.8E-90 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DA442_23955 ff6fa7662a508d406370fc73621137e3 317 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 310 1.4E-21 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 DA442_23955 ff6fa7662a508d406370fc73621137e3 317 SUPERFAMILY SSF56327 143 308 3.89E-42 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DA442_23955 ff6fa7662a508d406370fc73621137e3 317 PRINTS PR00086 L-lactate dehydrogenase signature 27 51 8.1E-22 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DA442_23955 ff6fa7662a508d406370fc73621137e3 317 PRINTS PR00086 L-lactate dehydrogenase signature 116 136 8.1E-22 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DA442_23955 ff6fa7662a508d406370fc73621137e3 317 PRINTS PR00086 L-lactate dehydrogenase signature 140 158 8.1E-22 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DA442_23955 ff6fa7662a508d406370fc73621137e3 317 PRINTS PR00086 L-lactate dehydrogenase signature 2 26 8.1E-22 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DA442_23955 ff6fa7662a508d406370fc73621137e3 317 PRINTS PR00086 L-lactate dehydrogenase signature 170 183 8.1E-22 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DA442_23955 ff6fa7662a508d406370fc73621137e3 317 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 141 1.7E-32 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 DA442_04465 7ec63ed8186278f74e8911040966f8f5 262 Pfam PF00005 ABC transporter 20 148 3.6E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_04465 7ec63ed8186278f74e8911040966f8f5 262 SUPERFAMILY SSF52540 4 217 8.51E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_04465 7ec63ed8186278f74e8911040966f8f5 262 SMART SM00382 29 199 4.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_04465 7ec63ed8186278f74e8911040966f8f5 262 Gene3D G3DSA:3.40.50.300 1 239 4.3E-56 T 14-10-2018 DA442_10175 99025ce2be5665a5b191760e42f19826 210 Pfam PF11185 Protein of unknown function (DUF2971) 80 147 2.6E-5 T 14-10-2018 IPR021352 Protein of unknown function DUF2971 DA442_05145 b782ae5550d7e0f64326b3b48ccf3f46 335 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 324 40.048 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 DA442_05145 b782ae5550d7e0f64326b3b48ccf3f46 335 SUPERFAMILY SSF52540 50 163 1.15E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_05145 b782ae5550d7e0f64326b3b48ccf3f46 335 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 18 323 1.7E-110 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 DA442_05145 b782ae5550d7e0f64326b3b48ccf3f46 335 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 23 325 8.8E-95 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 DA442_18295 85f5fe4534c5792432d5782190c471ea 433 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 194 427 7.0E-12 T 14-10-2018 DA442_18295 85f5fe4534c5792432d5782190c471ea 433 Gene3D G3DSA:3.20.20.70 31 426 5.5E-115 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_18295 85f5fe4534c5792432d5782190c471ea 433 Pfam PF13186 Iron-sulfur cluster-binding domain 317 377 1.5E-8 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain DA442_18295 85f5fe4534c5792432d5782190c471ea 433 Pfam PF04055 Radical SAM superfamily 43 210 6.3E-13 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DA442_18295 85f5fe4534c5792432d5782190c471ea 433 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 34 423 5.6E-155 T 14-10-2018 DA442_18295 85f5fe4534c5792432d5782190c471ea 433 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 316 405 4.9E-18 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain DA442_18295 85f5fe4534c5792432d5782190c471ea 433 SUPERFAMILY SSF102114 34 386 6.93E-41 T 14-10-2018 DA442_18295 85f5fe4534c5792432d5782190c471ea 433 Pfam PF13353 4Fe-4S single cluster domain 43 159 1.2E-4 T 14-10-2018 DA442_23795 a5875569798254ef48edc49b941dcd5d 164 Gene3D G3DSA:3.40.50.1000 9 164 4.4E-28 T 14-10-2018 IPR023214 HAD superfamily DA442_23795 a5875569798254ef48edc49b941dcd5d 164 SUPERFAMILY SSF56784 13 163 2.96E-23 T 14-10-2018 IPR036412 HAD-like superfamily DA442_23795 a5875569798254ef48edc49b941dcd5d 164 Pfam PF13419 Haloacid dehalogenase-like hydrolase 33 139 3.9E-11 T 14-10-2018 DA442_05870 662c6d408d7156a2cad4ad164dd8c145 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 34.323 T 14-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 DA442_05870 662c6d408d7156a2cad4ad164dd8c145 245 SUPERFAMILY SSF51366 2 242 3.7E-62 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DA442_05870 662c6d408d7156a2cad4ad164dd8c145 245 Gene3D G3DSA:3.20.20.70 1 245 2.5E-88 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_05870 662c6d408d7156a2cad4ad164dd8c145 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 4.7E-77 T 14-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 DA442_05870 662c6d408d7156a2cad4ad164dd8c145 245 Pfam PF00977 Histidine biosynthesis protein 2 234 1.0E-74 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 DA442_08315 c7c9d2636b434f8b019073a917cc2db8 149 Pfam PF06303 MatP N-terminal domain 2 85 4.7E-42 T 14-10-2018 IPR035087 MatP, N-terminal DA442_08315 c7c9d2636b434f8b019073a917cc2db8 149 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 29.967 T 14-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 DA442_08315 c7c9d2636b434f8b019073a917cc2db8 149 Gene3D G3DSA:1.20.1270.380 1 89 5.3E-48 T 14-10-2018 IPR038339 MatP, N-terminal domain superfamily DA442_08315 c7c9d2636b434f8b019073a917cc2db8 149 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 134 3.0E-73 T 14-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 DA442_08315 c7c9d2636b434f8b019073a917cc2db8 149 Pfam PF17414 MatP C-terminal ribbon-helix-helix domain 88 147 1.0E-26 T 14-10-2018 IPR035375 MatP, C-terminal ribbon-helix-helix domain DA442_08315 c7c9d2636b434f8b019073a917cc2db8 149 Gene3D G3DSA:1.10.1220.10 98 149 3.7E-22 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 DA442_21975 311cf844ea5bb11e32046556b503ad50 181 SMART SM00972 122 178 8.2E-7 T 14-10-2018 IPR007893 Spore coat protein U DA442_21975 311cf844ea5bb11e32046556b503ad50 181 Pfam PF05229 Spore Coat Protein U domain 29 178 5.6E-21 T 14-10-2018 IPR007893 Spore coat protein U DA442_13980 0160329479f307ed042d0ac501efafb3 429 Pfam PF08525 Opacity-associated protein A N-terminal motif 4 32 3.2E-5 T 14-10-2018 IPR013731 Opacity-associated protein A, N-terminal DA442_13980 0160329479f307ed042d0ac501efafb3 429 Gene3D G3DSA:2.70.70.10 266 395 4.5E-80 T 14-10-2018 IPR011055 Duplicated hybrid motif DA442_13980 0160329479f307ed042d0ac501efafb3 429 Gene3D G3DSA:3.10.450.350 69 159 7.7E-11 T 14-10-2018 DA442_13980 0160329479f307ed042d0ac501efafb3 429 Gene3D G3DSA:3.10.450.350 172 410 4.5E-80 T 14-10-2018 DA442_13980 0160329479f307ed042d0ac501efafb3 429 SUPERFAMILY SSF51261 144 390 8.89E-71 T 14-10-2018 IPR011055 Duplicated hybrid motif DA442_13980 0160329479f307ed042d0ac501efafb3 429 Pfam PF01551 Peptidase family M23 295 389 1.1E-30 T 14-10-2018 IPR016047 Peptidase M23 DA442_02055 b61a34563312b49d714f1bb592b9f77a 64 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 5 55 2.1E-8 T 14-10-2018 IPR010260 DNA-binding transcriptional activator AlpA DA442_02055 b61a34563312b49d714f1bb592b9f77a 64 SUPERFAMILY SSF46955 6 58 7.32E-8 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DA442_18635 01b980e995f8b560544fb2105020573e 128 Pfam PF01124 MAPEG family 3 119 4.0E-25 T 14-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein DA442_18635 01b980e995f8b560544fb2105020573e 128 SUPERFAMILY SSF161084 2 125 7.59E-31 T 14-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily DA442_18635 01b980e995f8b560544fb2105020573e 128 Gene3D G3DSA:1.20.120.550 1 124 1.1E-27 T 14-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily DA442_24555 b48e501c7cac3af4024273fa48a76252 227 Pfam PF13861 FlgD Tudor-like domain 94 223 8.1E-12 T 14-10-2018 IPR025963 FlgD Tudor-like domain DA442_24555 b48e501c7cac3af4024273fa48a76252 227 Pfam PF13860 FlgD Ig-like domain 114 182 9.7E-10 T 14-10-2018 IPR025965 FlgD Ig-like domain DA442_24555 b48e501c7cac3af4024273fa48a76252 227 Gene3D G3DSA:2.60.40.4070 111 190 7.8E-17 T 14-10-2018 DA442_24555 b48e501c7cac3af4024273fa48a76252 227 Pfam PF03963 Flagellar hook capping protein - N-terminal region 16 85 1.4E-18 T 14-10-2018 IPR005648 Flagellar hook capping protein DA442_24555 b48e501c7cac3af4024273fa48a76252 227 Gene3D G3DSA:2.30.30.910 100 222 7.8E-17 T 14-10-2018 DA442_08560 44a9e8d1be8f6e4cec5fc131c1535a50 206 SUPERFAMILY SSF103088 56 182 2.75E-29 T 14-10-2018 IPR036737 OmpA-like domain superfamily DA442_08560 44a9e8d1be8f6e4cec5fc131c1535a50 206 PRINTS PR01021 OMPA domain signature 114 129 1.5E-7 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DA442_08560 44a9e8d1be8f6e4cec5fc131c1535a50 206 PRINTS PR01021 OMPA domain signature 129 145 1.5E-7 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DA442_08560 44a9e8d1be8f6e4cec5fc131c1535a50 206 PRINTS PR01021 OMPA domain signature 84 106 1.5E-7 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DA442_08560 44a9e8d1be8f6e4cec5fc131c1535a50 206 SUPERFAMILY SSF103647 23 71 1.12E-9 T 14-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 DA442_08560 44a9e8d1be8f6e4cec5fc131c1535a50 206 Gene3D G3DSA:3.30.1330.60 57 190 9.5E-29 T 14-10-2018 IPR036737 OmpA-like domain superfamily DA442_08560 44a9e8d1be8f6e4cec5fc131c1535a50 206 Pfam PF00691 OmpA family 83 178 4.5E-19 T 14-10-2018 IPR006665 OmpA-like domain DA442_03225 d266071fa3f7231e9335522055c41e83 515 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 86 101 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DA442_03225 d266071fa3f7231e9335522055c41e83 515 Pfam PF01235 Sodium:alanine symporter family 51 472 9.5E-149 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DA442_03225 d266071fa3f7231e9335522055c41e83 515 PRINTS PR00175 Sodium/alanine symporter signature 304 322 5.7E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DA442_03225 d266071fa3f7231e9335522055c41e83 515 PRINTS PR00175 Sodium/alanine symporter signature 217 236 5.7E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DA442_03225 d266071fa3f7231e9335522055c41e83 515 PRINTS PR00175 Sodium/alanine symporter signature 365 387 5.7E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DA442_03225 d266071fa3f7231e9335522055c41e83 515 PRINTS PR00175 Sodium/alanine symporter signature 189 207 5.7E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DA442_03225 d266071fa3f7231e9335522055c41e83 515 PRINTS PR00175 Sodium/alanine symporter signature 428 448 5.7E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DA442_03225 d266071fa3f7231e9335522055c41e83 515 PRINTS PR00175 Sodium/alanine symporter signature 86 108 5.7E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DA442_03225 d266071fa3f7231e9335522055c41e83 515 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 462 1.0E-134 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DA442_17715 198adf07bd88939759df074fec40dd0f 159 ProSitePatterns PS00818 Dps protein family signature 1. 40 56 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 DA442_17715 198adf07bd88939759df074fec40dd0f 159 PIRSF PIRSF005900 1 159 3.7E-45 T 14-10-2018 IPR002177 DNA-binding protein Dps DA442_17715 198adf07bd88939759df074fec40dd0f 159 Gene3D G3DSA:1.20.1260.10 2 158 3.2E-54 T 14-10-2018 IPR012347 Ferritin-like DA442_17715 198adf07bd88939759df074fec40dd0f 159 Pfam PF00210 Ferritin-like domain 20 158 1.9E-24 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 DA442_17715 198adf07bd88939759df074fec40dd0f 159 ProSitePatterns PS00819 Dps protein family signature 2. 66 80 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 DA442_17715 198adf07bd88939759df074fec40dd0f 159 SUPERFAMILY SSF47240 5 158 3.02E-44 T 14-10-2018 IPR009078 Ferritin-like superfamily DA442_17715 198adf07bd88939759df074fec40dd0f 159 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 64 80 1.0E-13 T 14-10-2018 IPR002177 DNA-binding protein Dps DA442_17715 198adf07bd88939759df074fec40dd0f 159 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 135 153 1.0E-13 T 14-10-2018 IPR002177 DNA-binding protein Dps DA442_17715 198adf07bd88939759df074fec40dd0f 159 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 40 56 1.0E-13 T 14-10-2018 IPR002177 DNA-binding protein Dps DA442_25910 27afdc6f1b8a81770147b6dd33b86185 210 SUPERFAMILY SSF52833 28 207 7.78E-24 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_25910 27afdc6f1b8a81770147b6dd33b86185 210 Pfam PF13462 Thioredoxin 54 200 1.8E-6 T 14-10-2018 IPR012336 Thioredoxin-like fold DA442_25910 27afdc6f1b8a81770147b6dd33b86185 210 Gene3D G3DSA:3.40.30.10 24 208 4.0E-36 T 14-10-2018 DA442_23305 11c2ef8423b2559ec42a2832ce74ca44 164 Gene3D G3DSA:2.40.100.10 1 163 1.3E-63 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily DA442_23305 11c2ef8423b2559ec42a2832ce74ca44 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 DA442_23305 11c2ef8423b2559ec42a2832ce74ca44 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 161 8.9E-47 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DA442_23305 11c2ef8423b2559ec42a2832ce74ca44 164 PIRSF PIRSF001467 1 164 2.0E-27 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 DA442_23305 11c2ef8423b2559ec42a2832ce74ca44 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 5.5E-10 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DA442_23305 11c2ef8423b2559ec42a2832ce74ca44 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 5.5E-10 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DA442_23305 11c2ef8423b2559ec42a2832ce74ca44 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 5.5E-10 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DA442_23305 11c2ef8423b2559ec42a2832ce74ca44 164 SUPERFAMILY SSF50891 2 162 7.16E-58 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily DA442_11385 914b62ad3e851d95d5fe7ac3f80d205a 226 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 34.349 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 DA442_11385 914b62ad3e851d95d5fe7ac3f80d205a 226 Gene3D G3DSA:3.40.50.300 1 226 1.6E-82 T 14-10-2018 DA442_11385 914b62ad3e851d95d5fe7ac3f80d205a 226 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 2.7E-85 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 DA442_11385 914b62ad3e851d95d5fe7ac3f80d205a 226 Pfam PF02224 Cytidylate kinase 8 221 6.4E-78 T 14-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 DA442_11385 914b62ad3e851d95d5fe7ac3f80d205a 226 SUPERFAMILY SSF52540 6 223 2.06E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_10880 0978cbfc48bd1de3fdabefababc8c190 235 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 11 229 1.9E-87 T 14-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 DA442_10880 0978cbfc48bd1de3fdabefababc8c190 235 Pfam PF13489 Methyltransferase domain 52 201 1.1E-26 T 14-10-2018 DA442_10880 0978cbfc48bd1de3fdabefababc8c190 235 Gene3D G3DSA:3.40.50.150 11 235 4.8E-77 T 14-10-2018 DA442_10880 0978cbfc48bd1de3fdabefababc8c190 235 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 11 235 37.559 T 14-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 DA442_10880 0978cbfc48bd1de3fdabefababc8c190 235 SUPERFAMILY SSF53335 15 232 1.16E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_15840 226ad5b10ad81930190a037fe9085522 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 2.8E-69 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 DA442_15840 226ad5b10ad81930190a037fe9085522 289 SUPERFAMILY SSF52540 4 286 3.5E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_15840 226ad5b10ad81930190a037fe9085522 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 1.2E-27 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 DA442_15840 226ad5b10ad81930190a037fe9085522 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 1.2E-27 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 DA442_15840 226ad5b10ad81930190a037fe9085522 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 1.2E-27 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 DA442_15840 226ad5b10ad81930190a037fe9085522 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 1.2E-27 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 DA442_15840 226ad5b10ad81930190a037fe9085522 289 Gene3D G3DSA:3.40.50.300 1 289 8.5E-111 T 14-10-2018 DA442_24170 f6e54e1e838606212e294bbe29a15ee4 408 Gene3D G3DSA:3.30.9.10 89 359 2.0E-81 T 14-10-2018 DA442_24170 f6e54e1e838606212e294bbe29a15ee4 408 Pfam PF01266 FAD dependent oxidoreductase 6 397 2.6E-65 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DA442_24170 f6e54e1e838606212e294bbe29a15ee4 408 SUPERFAMILY SSF51905 5 301 1.47E-44 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_24170 f6e54e1e838606212e294bbe29a15ee4 408 Gene3D G3DSA:3.50.50.60 6 393 2.0E-81 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_24400 4aebf71c3663bb2a087d6cdc5f57a7ca 367 SUPERFAMILY SSF53383 3 362 1.58E-88 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_24400 4aebf71c3663bb2a087d6cdc5f57a7ca 367 Gene3D G3DSA:3.90.1150.10 8 353 1.0E-121 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DA442_24400 4aebf71c3663bb2a087d6cdc5f57a7ca 367 PIRSF PIRSF000524 1 365 4.9E-58 T 14-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 DA442_24400 4aebf71c3663bb2a087d6cdc5f57a7ca 367 TIGRFAM TIGR02326 transamin_PhnW: 2-aminoethylphosphonate--pyruvate transaminase 2 365 6.4E-202 T 14-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 DA442_24400 4aebf71c3663bb2a087d6cdc5f57a7ca 367 TIGRFAM TIGR03301 PhnW-AepZ: 2-aminoethylphosphonate aminotransferase 6 362 1.8E-170 T 14-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 DA442_24400 4aebf71c3663bb2a087d6cdc5f57a7ca 367 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 1 367 213.388 T 14-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 DA442_24400 4aebf71c3663bb2a087d6cdc5f57a7ca 367 Pfam PF00266 Aminotransferase class-V 36 310 1.9E-30 T 14-10-2018 IPR000192 Aminotransferase class V domain DA442_24400 4aebf71c3663bb2a087d6cdc5f57a7ca 367 Gene3D G3DSA:3.40.640.10 16 262 1.0E-121 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_12505 dc547397ab8b8359d26d45f8a45e4e50 377 PRINTS PR00207 Flagellin signature 37 54 1.5E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DA442_12505 dc547397ab8b8359d26d45f8a45e4e50 377 PRINTS PR00207 Flagellin signature 111 134 1.5E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DA442_12505 dc547397ab8b8359d26d45f8a45e4e50 377 PRINTS PR00207 Flagellin signature 76 95 1.5E-27 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DA442_12505 dc547397ab8b8359d26d45f8a45e4e50 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 293 376 9.8E-24 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DA442_12505 dc547397ab8b8359d26d45f8a45e4e50 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.8E-44 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DA442_12505 dc547397ab8b8359d26d45f8a45e4e50 377 SUPERFAMILY SSF64518 5 376 2.09E-96 T 14-10-2018 DA442_12505 dc547397ab8b8359d26d45f8a45e4e50 377 Gene3D G3DSA:3.30.70.2120 174 275 6.2E-79 T 14-10-2018 DA442_12505 dc547397ab8b8359d26d45f8a45e4e50 377 Pfam PF07196 Flagellin hook IN motif 201 246 3.8E-11 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 DA442_12505 dc547397ab8b8359d26d45f8a45e4e50 377 Gene3D G3DSA:1.10.8.410 328 376 2.7E-18 T 14-10-2018 DA442_12505 dc547397ab8b8359d26d45f8a45e4e50 377 Gene3D G3DSA:1.20.1330.10 44 327 6.2E-79 T 14-10-2018 DA442_14310 6c8392dd3201ac22e233d59fdc5620cf 264 Pfam PF01578 Cytochrome C assembly protein 39 262 1.2E-45 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 DA442_02345 a8f314c34f6aa4c6f52aebd2f74c3762 454 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 451 33.839 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DA442_02345 a8f314c34f6aa4c6f52aebd2f74c3762 454 SUPERFAMILY SSF53623 100 313 1.31E-54 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DA442_02345 a8f314c34f6aa4c6f52aebd2f74c3762 454 Gene3D G3DSA:3.40.1390.10 1 80 7.1E-29 T 14-10-2018 DA442_02345 a8f314c34f6aa4c6f52aebd2f74c3762 454 Pfam PF01225 Mur ligase family, catalytic domain 24 91 7.1E-8 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 DA442_02345 a8f314c34f6aa4c6f52aebd2f74c3762 454 Pfam PF08245 Mur ligase middle domain 105 295 1.0E-48 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DA442_02345 a8f314c34f6aa4c6f52aebd2f74c3762 454 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 450 5.4E-141 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DA442_02345 a8f314c34f6aa4c6f52aebd2f74c3762 454 SUPERFAMILY SSF53244 316 450 9.46E-34 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DA442_02345 a8f314c34f6aa4c6f52aebd2f74c3762 454 Gene3D G3DSA:3.40.1190.10 81 314 6.7E-75 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DA442_02345 a8f314c34f6aa4c6f52aebd2f74c3762 454 SUPERFAMILY SSF63418 1 96 1.96E-27 T 14-10-2018 IPR035911 MurE/MurF, N-terminal DA442_02345 a8f314c34f6aa4c6f52aebd2f74c3762 454 Gene3D G3DSA:3.90.190.20 315 453 3.2E-36 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DA442_02345 a8f314c34f6aa4c6f52aebd2f74c3762 454 Pfam PF02875 Mur ligase family, glutamate ligase domain 316 393 2.5E-11 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 DA442_13960 66547058e1fa1b3a2bc02c41ad28ef0c 337 Pfam PF13609 Gram-negative porin 10 302 2.1E-26 T 14-10-2018 DA442_13960 66547058e1fa1b3a2bc02c41ad28ef0c 337 SUPERFAMILY SSF56935 22 337 3.66E-52 T 14-10-2018 DA442_13960 66547058e1fa1b3a2bc02c41ad28ef0c 337 Gene3D G3DSA:2.40.160.10 22 337 1.3E-62 T 14-10-2018 IPR023614 Porin domain superfamily DA442_15585 96fbaac49a6f12cfce14dabc2556a1f4 223 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DA442_15585 96fbaac49a6f12cfce14dabc2556a1f4 223 SUPERFAMILY SSF51366 4 217 2.67E-78 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DA442_15585 96fbaac49a6f12cfce14dabc2556a1f4 223 Gene3D G3DSA:3.20.20.70 5 222 4.1E-87 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_15585 96fbaac49a6f12cfce14dabc2556a1f4 223 PIRSF PIRSF001461 1 223 6.7E-107 T 14-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DA442_15585 96fbaac49a6f12cfce14dabc2556a1f4 223 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DA442_15585 96fbaac49a6f12cfce14dabc2556a1f4 223 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 2.1E-100 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DA442_15585 96fbaac49a6f12cfce14dabc2556a1f4 223 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 1.7E-92 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DA442_16920 3cf94051cee52cfef7645184ec5d7f4c 274 ProSitePatterns PS01228 Hypothetical cof family signature 1. 13 24 - T 14-10-2018 DA442_16920 3cf94051cee52cfef7645184ec5d7f4c 274 Gene3D G3DSA:3.30.1240.10 91 195 4.3E-75 T 14-10-2018 DA442_16920 3cf94051cee52cfef7645184ec5d7f4c 274 SUPERFAMILY SSF56784 12 273 2.31E-68 T 14-10-2018 IPR036412 HAD-like superfamily DA442_16920 3cf94051cee52cfef7645184ec5d7f4c 274 ProSitePatterns PS01229 Hypothetical cof family signature 2. 221 243 - T 14-10-2018 DA442_16920 3cf94051cee52cfef7645184ec5d7f4c 274 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 13 269 7.0E-62 T 14-10-2018 IPR000150 Cof family GO:0016787 DA442_16920 3cf94051cee52cfef7645184ec5d7f4c 274 Pfam PF08282 haloacid dehalogenase-like hydrolase 14 269 1.7E-69 T 14-10-2018 DA442_16920 3cf94051cee52cfef7645184ec5d7f4c 274 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 13 240 1.6E-35 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 DA442_16920 3cf94051cee52cfef7645184ec5d7f4c 274 Gene3D G3DSA:3.40.50.1000 14 265 4.3E-75 T 14-10-2018 IPR023214 HAD superfamily DA442_00620 233bdfd3694b3422b0388ab0324ec5b6 348 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 121 4.1E-7 T 14-10-2018 IPR000014 PAS domain DA442_00620 233bdfd3694b3422b0388ab0324ec5b6 348 Gene3D G3DSA:3.30.565.10 192 348 1.2E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_00620 233bdfd3694b3422b0388ab0324ec5b6 348 SMART SM00388 129 194 3.0E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_00620 233bdfd3694b3422b0388ab0324ec5b6 348 SUPERFAMILY SSF55785 8 102 8.9E-9 T 14-10-2018 IPR035965 PAS domain superfamily DA442_00620 233bdfd3694b3422b0388ab0324ec5b6 348 SUPERFAMILY SSF47384 125 190 2.16E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DA442_00620 233bdfd3694b3422b0388ab0324ec5b6 348 SMART SM00091 4 72 1.5E-7 T 14-10-2018 IPR000014 PAS domain DA442_00620 233bdfd3694b3422b0388ab0324ec5b6 348 SMART SM00387 233 348 2.5E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_00620 233bdfd3694b3422b0388ab0324ec5b6 348 Pfam PF00989 PAS fold 7 111 2.6E-16 T 14-10-2018 IPR013767 PAS fold GO:0006355 DA442_00620 233bdfd3694b3422b0388ab0324ec5b6 348 Gene3D G3DSA:3.30.450.20 1 112 2.1E-28 T 14-10-2018 DA442_00620 233bdfd3694b3422b0388ab0324ec5b6 348 Gene3D G3DSA:1.10.287.130 114 191 1.3E-13 T 14-10-2018 DA442_00620 233bdfd3694b3422b0388ab0324ec5b6 348 Pfam PF00512 His Kinase A (phospho-acceptor) domain 133 189 2.9E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_00620 233bdfd3694b3422b0388ab0324ec5b6 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 311 329 1.3E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_00620 233bdfd3694b3422b0388ab0324ec5b6 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 282 296 1.3E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_00620 233bdfd3694b3422b0388ab0324ec5b6 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 347 1.3E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_00620 233bdfd3694b3422b0388ab0324ec5b6 348 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 347 4.0E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_00620 233bdfd3694b3422b0388ab0324ec5b6 348 SUPERFAMILY SSF55874 198 347 1.3E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_20360 10518270499360c861355ee52439fcb5 320 Pfam PF03150 Di-haem cytochrome c peroxidase 45 187 2.7E-33 T 14-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 DA442_20360 10518270499360c861355ee52439fcb5 320 SUPERFAMILY SSF46626 28 176 1.04E-33 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_20360 10518270499360c861355ee52439fcb5 320 Gene3D G3DSA:1.10.760.10 46 175 2.4E-83 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_20360 10518270499360c861355ee52439fcb5 320 PIRSF PIRSF000294 10 316 5.5E-74 T 14-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 DA442_20360 10518270499360c861355ee52439fcb5 320 Gene3D G3DSA:1.10.760.10 176 307 2.4E-83 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_20360 10518270499360c861355ee52439fcb5 320 Pfam PF00034 Cytochrome c 196 306 9.2E-6 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_20360 10518270499360c861355ee52439fcb5 320 SUPERFAMILY SSF46626 179 312 5.46E-31 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_06465 66674aa6c113da39e2d5a23815dc938c 252 Pfam PF02253 Phospholipase A1 19 249 7.3E-59 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 DA442_06465 66674aa6c113da39e2d5a23815dc938c 252 PRINTS PR01486 Bacterial phospholipase A1 protein signature 53 70 2.1E-21 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 DA442_06465 66674aa6c113da39e2d5a23815dc938c 252 PRINTS PR01486 Bacterial phospholipase A1 protein signature 222 242 2.1E-21 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 DA442_06465 66674aa6c113da39e2d5a23815dc938c 252 PRINTS PR01486 Bacterial phospholipase A1 protein signature 167 185 2.1E-21 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 DA442_06465 66674aa6c113da39e2d5a23815dc938c 252 PRINTS PR01486 Bacterial phospholipase A1 protein signature 96 115 2.1E-21 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 DA442_06465 66674aa6c113da39e2d5a23815dc938c 252 PRINTS PR01486 Bacterial phospholipase A1 protein signature 200 217 2.1E-21 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 DA442_06465 66674aa6c113da39e2d5a23815dc938c 252 SUPERFAMILY SSF56931 13 251 6.8E-69 T 14-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 DA442_06465 66674aa6c113da39e2d5a23815dc938c 252 Gene3D G3DSA:2.40.230.10 9 252 5.8E-65 T 14-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 DA442_12770 8436875e881dcedde18f00f5c1b94716 401 PIRSF PIRSF006205 1 401 2.4E-150 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DA442_12770 8436875e881dcedde18f00f5c1b94716 401 SUPERFAMILY SSF69055 302 399 1.14E-29 T 14-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DA442_12770 8436875e881dcedde18f00f5c1b94716 401 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 391 1.2E-38 T 14-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DA442_12770 8436875e881dcedde18f00f5c1b94716 401 Gene3D G3DSA:1.10.1740.10 312 400 1.8E-27 T 14-10-2018 DA442_12770 8436875e881dcedde18f00f5c1b94716 401 SUPERFAMILY SSF55347 126 274 1.24E-62 T 14-10-2018 DA442_12770 8436875e881dcedde18f00f5c1b94716 401 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 2.1E-45 T 14-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DA442_12770 8436875e881dcedde18f00f5c1b94716 401 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 1.3E-36 T 14-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DA442_12770 8436875e881dcedde18f00f5c1b94716 401 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 395 2.6E-161 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DA442_12770 8436875e881dcedde18f00f5c1b94716 401 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 396 45.606 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DA442_12770 8436875e881dcedde18f00f5c1b94716 401 Gene3D G3DSA:3.40.50.720 1 150 4.2E-52 T 14-10-2018 DA442_12770 8436875e881dcedde18f00f5c1b94716 401 SUPERFAMILY SSF51735 2 150 4.26E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_22285 4ff4888ab6ffae74c0e1f5966e11d944 396 Gene3D G3DSA:1.20.1720.10 4 380 1.4E-70 T 14-10-2018 DA442_22285 4ff4888ab6ffae74c0e1f5966e11d944 396 Pfam PF07690 Major Facilitator Superfamily 10 345 3.5E-40 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DA442_22285 4ff4888ab6ffae74c0e1f5966e11d944 396 Hamap MF_01530 Multidrug resistance protein MdtL [mdtL]. 1 396 41.624 T 14-10-2018 IPR023697 Multidrug resistance protein MdtL GO:0005215|GO:0005886 DA442_22285 4ff4888ab6ffae74c0e1f5966e11d944 396 SUPERFAMILY SSF103473 3 382 1.1E-49 T 14-10-2018 IPR036259 MFS transporter superfamily DA442_22285 4ff4888ab6ffae74c0e1f5966e11d944 396 ProSitePatterns PS00216 Sugar transport proteins signature 1. 58 75 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DA442_17475 1b81adc832c18e96652fea14c4502b38 177 SUPERFAMILY SSF47928 3 105 2.75E-28 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_17475 1b81adc832c18e96652fea14c4502b38 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.959 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_17475 1b81adc832c18e96652fea14c4502b38 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 3.5E-28 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_17475 1b81adc832c18e96652fea14c4502b38 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 3.5E-28 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_17475 1b81adc832c18e96652fea14c4502b38 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 3.5E-28 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_17475 1b81adc832c18e96652fea14c4502b38 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 3.5E-28 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_17475 1b81adc832c18e96652fea14c4502b38 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 3.5E-28 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_17475 1b81adc832c18e96652fea14c4502b38 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 14-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_17475 1b81adc832c18e96652fea14c4502b38 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 8.7E-64 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_17475 1b81adc832c18e96652fea14c4502b38 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 8.5E-54 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_17475 1b81adc832c18e96652fea14c4502b38 177 Gene3D G3DSA:1.10.520.20 2 106 3.3E-38 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_11555 612c4a1ea0cb68da5b8678f2c4ee3a5d 1023 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 424 2.2E-171 T 14-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 DA442_11555 612c4a1ea0cb68da5b8678f2c4ee3a5d 1023 SUPERFAMILY SSF50249 40 124 3.97E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_11555 612c4a1ea0cb68da5b8678f2c4ee3a5d 1023 Pfam PF00575 S1 RNA binding domain 37 118 5.1E-14 T 14-10-2018 IPR003029 S1 domain GO:0003676 DA442_11555 612c4a1ea0cb68da5b8678f2c4ee3a5d 1023 Gene3D G3DSA:3.40.1260.20 400 508 1.7E-38 T 14-10-2018 DA442_11555 612c4a1ea0cb68da5b8678f2c4ee3a5d 1023 Gene3D G3DSA:2.40.50.140 32 125 3.9E-32 T 14-10-2018 DA442_11555 612c4a1ea0cb68da5b8678f2c4ee3a5d 1023 SMART SM00316 37 119 1.1E-10 T 14-10-2018 IPR022967 RNA-binding domain, S1 DA442_11555 612c4a1ea0cb68da5b8678f2c4ee3a5d 1023 Hamap MF_00970 Ribonuclease E [rne]. 1 1010 35.943 T 14-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 DA442_11555 612c4a1ea0cb68da5b8678f2c4ee3a5d 1023 Pfam PF10150 Ribonuclease E/G family 121 390 1.1E-94 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 DA442_04565 2411e05576e0397ec9b37b9861271b6b 270 Gene3D G3DSA:3.40.50.300 1 260 1.2E-72 T 14-10-2018 DA442_04565 2411e05576e0397ec9b37b9861271b6b 270 PIRSF PIRSF003092 1 270 8.3E-94 T 14-10-2018 IPR025501 ATP binding protein MinD DA442_04565 2411e05576e0397ec9b37b9861271b6b 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 3.3E-109 T 14-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 DA442_04565 2411e05576e0397ec9b37b9861271b6b 270 SUPERFAMILY SSF52540 1 268 7.57E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_04565 2411e05576e0397ec9b37b9861271b6b 270 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 227 1.9E-19 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain DA442_08705 a5af888c8fcd3ad9ccf006d12b124744 126 Pfam PF09474 Type III secretion system YscX (type_III_YscX) 2 126 1.6E-51 T 14-10-2018 IPR012672 Type III secretion system YscX DA442_08705 a5af888c8fcd3ad9ccf006d12b124744 126 TIGRFAM TIGR02502 type_III_YscX: type III secretion protein, YscX family 2 126 1.1E-56 T 14-10-2018 IPR012672 Type III secretion system YscX DA442_11465 a2c77030d9baaaa1054171768da35a5e 476 Gene3D G3DSA:3.30.1360.60 394 475 6.3E-29 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DA442_11465 a2c77030d9baaaa1054171768da35a5e 476 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 375 458 4.2E-21 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 DA442_11465 a2c77030d9baaaa1054171768da35a5e 476 Pfam PF00367 phosphotransferase system, EIIB 402 434 7.3E-12 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DA442_11465 a2c77030d9baaaa1054171768da35a5e 476 SUPERFAMILY SSF55604 399 472 9.68E-20 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DA442_11465 a2c77030d9baaaa1054171768da35a5e 476 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 473 1.8E-198 T 14-10-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0016021|GO:1904659 DA442_11465 a2c77030d9baaaa1054171768da35a5e 476 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 412 429 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DA442_11465 a2c77030d9baaaa1054171768da35a5e 476 Pfam PF02378 Phosphotransferase system, EIIC 13 318 2.6E-75 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DA442_23255 f799f4bab88350f09f9d03aa4894cb39 360 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 10 354 2.0E-116 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DA442_23255 f799f4bab88350f09f9d03aa4894cb39 360 Pfam PF01098 Cell cycle protein 14 355 4.3E-99 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DA442_23255 f799f4bab88350f09f9d03aa4894cb39 360 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 4 359 26.255 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DA442_10885 a03e55a87b54f44df3e175b80440f467 760 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 665 6.0E-114 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DA442_10885 a03e55a87b54f44df3e175b80440f467 760 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 142 219 5.0E-11 T 14-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DA442_10885 a03e55a87b54f44df3e175b80440f467 760 Pfam PF03477 ATP cone domain 6 92 2.1E-18 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 DA442_10885 a03e55a87b54f44df3e175b80440f467 760 SUPERFAMILY SSF51998 222 738 5.8E-164 T 14-10-2018 DA442_10885 a03e55a87b54f44df3e175b80440f467 760 Gene3D G3DSA:3.20.70.20 78 742 2.8E-155 T 14-10-2018 DA442_10885 a03e55a87b54f44df3e175b80440f467 760 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 5.4E-175 T 14-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DA442_10885 a03e55a87b54f44df3e175b80440f467 760 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DA442_10885 a03e55a87b54f44df3e175b80440f467 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 1.6E-36 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DA442_10885 a03e55a87b54f44df3e175b80440f467 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 1.6E-36 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DA442_10885 a03e55a87b54f44df3e175b80440f467 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 1.6E-36 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DA442_10885 a03e55a87b54f44df3e175b80440f467 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 1.6E-36 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DA442_10885 a03e55a87b54f44df3e175b80440f467 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 1.6E-36 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DA442_10885 a03e55a87b54f44df3e175b80440f467 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 1.6E-36 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DA442_10885 a03e55a87b54f44df3e175b80440f467 760 SUPERFAMILY SSF48168 10 221 2.49E-74 T 14-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DA442_14440 ee38ae4c416c25d57a2b3a6f6f8719ac 160 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 14 158 2.7E-50 T 14-10-2018 IPR008136 CinA, C-terminal DA442_14440 ee38ae4c416c25d57a2b3a6f6f8719ac 160 Pfam PF02464 Competence-damaged protein 6 158 1.7E-56 T 14-10-2018 IPR008136 CinA, C-terminal DA442_14440 ee38ae4c416c25d57a2b3a6f6f8719ac 160 Gene3D G3DSA:3.90.950.20 1 160 1.0E-58 T 14-10-2018 IPR036653 CinA-like, C-terminal DA442_14440 ee38ae4c416c25d57a2b3a6f6f8719ac 160 SUPERFAMILY SSF142433 4 159 1.24E-56 T 14-10-2018 IPR036653 CinA-like, C-terminal DA442_17420 af8abba27d61d266e21f9a009b061e18 613 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DA442_17420 af8abba27d61d266e21f9a009b061e18 613 SUPERFAMILY SSF143975 3 420 4.05E-136 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DA442_17420 af8abba27d61d266e21f9a009b061e18 613 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 607 2.4E-267 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DA442_17420 af8abba27d61d266e21f9a009b061e18 613 Pfam PF00920 Dehydratase family 34 604 4.4E-221 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DA442_17420 af8abba27d61d266e21f9a009b061e18 613 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 607 45.304 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DA442_17420 af8abba27d61d266e21f9a009b061e18 613 SUPERFAMILY SSF52016 421 608 1.33E-61 T 14-10-2018 DA442_17420 af8abba27d61d266e21f9a009b061e18 613 Gene3D G3DSA:3.50.30.80 421 572 1.1E-55 T 14-10-2018 DA442_17420 af8abba27d61d266e21f9a009b061e18 613 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DA442_11440 4001958d10748111ca29f42fa0355252 196 Pfam PF13505 Outer membrane protein beta-barrel domain 15 194 6.1E-7 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel DA442_11440 4001958d10748111ca29f42fa0355252 196 Gene3D G3DSA:2.40.160.20 27 196 4.9E-11 T 14-10-2018 DA442_11440 4001958d10748111ca29f42fa0355252 196 SUPERFAMILY SSF56925 31 196 1.41E-19 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DA442_24750 c822e857699d7825feef35b109682a0f 118 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 112 1.9E-8 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DA442_24750 c822e857699d7825feef35b109682a0f 118 Gene3D G3DSA:3.10.180.10 1 117 8.1E-19 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DA442_24750 c822e857699d7825feef35b109682a0f 118 SUPERFAMILY SSF54593 6 115 1.51E-21 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DA442_21770 056daa59eca0ed2dc46aa34faab2c84e 712 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 28 712 1.4E-129 T 14-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 DA442_21770 056daa59eca0ed2dc46aa34faab2c84e 712 Gene3D G3DSA:2.40.170.20 166 712 1.0E-84 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DA442_21770 056daa59eca0ed2dc46aa34faab2c84e 712 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 30 712 2.4E-119 T 14-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 DA442_21770 056daa59eca0ed2dc46aa34faab2c84e 712 SUPERFAMILY SSF56935 21 712 1.68E-115 T 14-10-2018 DA442_21770 056daa59eca0ed2dc46aa34faab2c84e 712 Gene3D G3DSA:2.170.130.10 28 155 2.7E-30 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DA442_21770 056daa59eca0ed2dc46aa34faab2c84e 712 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 151 4.2E-25 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain DA442_21770 056daa59eca0ed2dc46aa34faab2c84e 712 Pfam PF00593 TonB dependent receptor 218 710 5.4E-55 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DA442_04870 e69c4bdb9fc9f4b48c58615c73b55b14 480 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 40 468 7.7E-126 T 14-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 DA442_04870 e69c4bdb9fc9f4b48c58615c73b55b14 480 Pfam PF00501 AMP-binding enzyme 21 380 3.9E-49 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DA442_04870 e69c4bdb9fc9f4b48c58615c73b55b14 480 Gene3D G3DSA:3.30.300.30 377 474 2.1E-15 T 14-10-2018 DA442_04870 e69c4bdb9fc9f4b48c58615c73b55b14 480 ProSitePatterns PS00455 Putative AMP-binding domain signature. 163 174 - T 14-10-2018 IPR020845 AMP-binding, conserved site DA442_04870 e69c4bdb9fc9f4b48c58615c73b55b14 480 Gene3D G3DSA:3.40.50.12780 17 376 1.6E-62 T 14-10-2018 DA442_04870 e69c4bdb9fc9f4b48c58615c73b55b14 480 SUPERFAMILY SSF56801 17 475 5.1E-84 T 14-10-2018 DA442_18500 5c8135926759db5483ca25f87d61beb7 289 Pfam PF00482 Type II secretion system (T2SS), protein F 122 246 6.3E-18 T 14-10-2018 IPR018076 Type II secretion system F domain DA442_18500 5c8135926759db5483ca25f87d61beb7 289 Gene3D G3DSA:1.20.81.30 114 226 3.5E-5 T 14-10-2018 DA442_03985 84c83ca3158b2b8c28daccf08bf42f71 149 Pfam PF04214 Protein of unknown function, DUF 48 118 5.9E-30 T 14-10-2018 IPR007332 Protein of unknown function DUF411 DA442_08740 64b216be9b68b99b64d18ed8bbac55d3 328 TIGRFAM TIGR02551 SpaO_YscQ: type III secretion apparatus protein, YscQ/HrcQ family 46 320 1.0E-72 T 14-10-2018 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO GO:0030254 DA442_08740 64b216be9b68b99b64d18ed8bbac55d3 328 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 191 201 1.7E-7 T 14-10-2018 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 DA442_08740 64b216be9b68b99b64d18ed8bbac55d3 328 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 253 265 1.7E-7 T 14-10-2018 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 DA442_08740 64b216be9b68b99b64d18ed8bbac55d3 328 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 297 314 1.7E-7 T 14-10-2018 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 DA442_08740 64b216be9b68b99b64d18ed8bbac55d3 328 SUPERFAMILY SSF101801 249 324 8.37E-20 T 14-10-2018 IPR036429 SpoA-like superfamily DA442_08740 64b216be9b68b99b64d18ed8bbac55d3 328 Gene3D G3DSA:2.30.330.10 237 325 1.2E-27 T 14-10-2018 IPR036429 SpoA-like superfamily DA442_08740 64b216be9b68b99b64d18ed8bbac55d3 328 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 253 320 1.4E-20 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) DA442_08740 64b216be9b68b99b64d18ed8bbac55d3 328 SUPERFAMILY SSF101801 167 226 1.83E-7 T 14-10-2018 IPR036429 SpoA-like superfamily DA442_08350 01cfce5876954eb0f7e50e504c39efe9 707 PIRSF PIRSF037618 1 707 9.3E-296 T 14-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 DA442_08350 01cfce5876954eb0f7e50e504c39efe9 707 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 305 311 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DA442_08350 01cfce5876954eb0f7e50e504c39efe9 707 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 436 661 9.9E-28 T 14-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 DA442_08350 01cfce5876954eb0f7e50e504c39efe9 707 Gene3D G3DSA:3.40.50.150 169 371 4.4E-136 T 14-10-2018 DA442_08350 01cfce5876954eb0f7e50e504c39efe9 707 SMART SM00981 56 154 1.7E-19 T 14-10-2018 IPR004114 THUMP domain GO:0003723 DA442_08350 01cfce5876954eb0f7e50e504c39efe9 707 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 706 31.387 T 14-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 DA442_08350 01cfce5876954eb0f7e50e504c39efe9 707 SUPERFAMILY SSF53335 140 371 6.85E-42 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_08350 01cfce5876954eb0f7e50e504c39efe9 707 Pfam PF01170 Putative RNA methylase family UPF0020 162 374 4.8E-62 T 14-10-2018 IPR000241 Putative RNA methylase domain DA442_08350 01cfce5876954eb0f7e50e504c39efe9 707 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 14-10-2018 IPR000241 Putative RNA methylase domain DA442_08350 01cfce5876954eb0f7e50e504c39efe9 707 SUPERFAMILY SSF53335 399 707 4.4E-70 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_08350 01cfce5876954eb0f7e50e504c39efe9 707 Pfam PF02926 THUMP domain 30 153 2.8E-13 T 14-10-2018 IPR004114 THUMP domain GO:0003723 DA442_08350 01cfce5876954eb0f7e50e504c39efe9 707 Gene3D G3DSA:3.30.750.80 396 487 8.5E-35 T 14-10-2018 DA442_08350 01cfce5876954eb0f7e50e504c39efe9 707 Gene3D G3DSA:3.40.50.150 488 706 5.4E-74 T 14-10-2018 DA442_08350 01cfce5876954eb0f7e50e504c39efe9 707 Gene3D G3DSA:3.30.2130.30 6 255 4.4E-136 T 14-10-2018 DA442_17765 da25bf73d08dea04b17f364f24214593 195 Gene3D G3DSA:3.40.50.150 2 180 9.8E-26 T 14-10-2018 DA442_17765 da25bf73d08dea04b17f364f24214593 195 SUPERFAMILY SSF53335 9 194 1.84E-28 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_17765 da25bf73d08dea04b17f364f24214593 195 Pfam PF13489 Methyltransferase domain 40 149 7.6E-17 T 14-10-2018 DA442_11640 59c50e168efa7ab46a7f06d66717206f 264 Gene3D G3DSA:3.40.50.300 1 255 2.6E-53 T 14-10-2018 DA442_11640 59c50e168efa7ab46a7f06d66717206f 264 SMART SM00382 31 226 8.8E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_11640 59c50e168efa7ab46a7f06d66717206f 264 SUPERFAMILY SSF52540 2 231 3.62E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_11640 59c50e168efa7ab46a7f06d66717206f 264 Pfam PF00005 ABC transporter 22 177 5.3E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_11640 59c50e168efa7ab46a7f06d66717206f 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_14020 8981c491e9b0abd171ef4531ac5c6537 1128 Gene3D G3DSA:3.30.450.20 253 358 4.7E-8 T 14-10-2018 DA442_14020 8981c491e9b0abd171ef4531ac5c6537 1128 PRINTS PR00344 Bacterial sensor protein C-terminal signature 668 681 2.1E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_14020 8981c491e9b0abd171ef4531ac5c6537 1128 PRINTS PR00344 Bacterial sensor protein C-terminal signature 644 662 2.1E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_14020 8981c491e9b0abd171ef4531ac5c6537 1128 PRINTS PR00344 Bacterial sensor protein C-terminal signature 609 623 2.1E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_14020 8981c491e9b0abd171ef4531ac5c6537 1128 PRINTS PR00344 Bacterial sensor protein C-terminal signature 627 637 2.1E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_14020 8981c491e9b0abd171ef4531ac5c6537 1128 SMART SM00091 873 938 7.0E-6 T 14-10-2018 IPR000014 PAS domain DA442_14020 8981c491e9b0abd171ef4531ac5c6537 1128 Gene3D G3DSA:3.30.450.20 852 954 4.5E-8 T 14-10-2018 DA442_14020 8981c491e9b0abd171ef4531ac5c6537 1128 Pfam PF00672 HAMP domain 379 427 1.2E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_14020 8981c491e9b0abd171ef4531ac5c6537 1128 SMART SM00388 459 527 1.4E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_14020 8981c491e9b0abd171ef4531ac5c6537 1128 SUPERFAMILY SSF52172 718 843 1.25E-40 T 14-10-2018 IPR011006 CheY-like superfamily DA442_14020 8981c491e9b0abd171ef4531ac5c6537 1128 Pfam PF13188 PAS domain 879 917 1.6E-4 T 14-10-2018 IPR000014 PAS domain DA442_14020 8981c491e9b0abd171ef4531ac5c6537 1128 Pfam PF00072 Response regulator receiver domain 726 836 1.0E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_14020 8981c491e9b0abd171ef4531ac5c6537 1128 SUPERFAMILY SSF158472 378 429 1.27E-10 T 14-10-2018 DA442_14020 8981c491e9b0abd171ef4531ac5c6537 1128 SMART SM00304 377 430 1.3E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_14020 8981c491e9b0abd171ef4531ac5c6537 1128 Pfam PF00512 His Kinase A (phospho-acceptor) domain 460 525 2.3E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_14020 8981c491e9b0abd171ef4531ac5c6537 1128 Gene3D G3DSA:1.10.8.500 376 430 5.8E-16 T 14-10-2018 DA442_14020 8981c491e9b0abd171ef4531ac5c6537 1128 SMART SM00387 573 684 4.7E-39 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_14020 8981c491e9b0abd171ef4531ac5c6537 1128 SUPERFAMILY SSF55785 860 927 2.09E-8 T 14-10-2018 IPR035965 PAS domain superfamily DA442_14020 8981c491e9b0abd171ef4531ac5c6537 1128 SMART SM00448 722 835 3.3E-44 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_14020 8981c491e9b0abd171ef4531ac5c6537 1128 Gene3D G3DSA:3.30.565.10 529 689 1.9E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_14020 8981c491e9b0abd171ef4531ac5c6537 1128 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 574 683 1.7E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_14020 8981c491e9b0abd171ef4531ac5c6537 1128 Gene3D G3DSA:1.10.287.130 442 528 2.8E-20 T 14-10-2018 DA442_14020 8981c491e9b0abd171ef4531ac5c6537 1128 SUPERFAMILY SSF47384 446 527 2.35E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DA442_14020 8981c491e9b0abd171ef4531ac5c6537 1128 SUPERFAMILY SSF55874 516 687 2.1E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_14020 8981c491e9b0abd171ef4531ac5c6537 1128 Gene3D G3DSA:3.40.50.2300 715 851 5.0E-40 T 14-10-2018 DA442_17075 fc7b353e1cb80b236ed47a08af371ac1 419 SUPERFAMILY SSF52540 90 371 2.93E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_17075 fc7b353e1cb80b236ed47a08af371ac1 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 5.2E-22 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DA442_17075 fc7b353e1cb80b236ed47a08af371ac1 419 SUPERFAMILY SSF50249 48 125 6.28E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_17075 fc7b353e1cb80b236ed47a08af371ac1 419 SMART SM00382 170 355 6.3E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_17075 fc7b353e1cb80b236ed47a08af371ac1 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 7.0E-220 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 DA442_17075 fc7b353e1cb80b236ed47a08af371ac1 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 252.642 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 DA442_17075 fc7b353e1cb80b236ed47a08af371ac1 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 5.0E-32 T 14-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 DA442_17075 fc7b353e1cb80b236ed47a08af371ac1 419 Gene3D G3DSA:1.10.720.10 1 47 2.0E-22 T 14-10-2018 DA442_17075 fc7b353e1cb80b236ed47a08af371ac1 419 Gene3D G3DSA:2.40.50.140 48 117 1.1E-34 T 14-10-2018 DA442_17075 fc7b353e1cb80b236ed47a08af371ac1 419 Gene3D G3DSA:3.40.50.300 130 417 7.3E-134 T 14-10-2018 DA442_17075 fc7b353e1cb80b236ed47a08af371ac1 419 SUPERFAMILY SSF68912 1 46 6.28E-12 T 14-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily DA442_17075 fc7b353e1cb80b236ed47a08af371ac1 419 SMART SM00357 52 118 1.7E-17 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 DA442_17075 fc7b353e1cb80b236ed47a08af371ac1 419 SMART SM00959 5 47 6.9E-17 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 DA442_17075 fc7b353e1cb80b236ed47a08af371ac1 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 9.9E-17 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 DA442_22775 a240441a77e1dd2b71d876f986f1b91c 506 SMART SM00382 283 478 1.0E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_22775 a240441a77e1dd2b71d876f986f1b91c 506 SMART SM00382 34 228 1.3E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_22775 a240441a77e1dd2b71d876f986f1b91c 506 Pfam PF00005 ABC transporter 275 429 8.8E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_22775 a240441a77e1dd2b71d876f986f1b91c 506 Gene3D G3DSA:3.40.50.300 3 250 1.1E-58 T 14-10-2018 DA442_22775 a240441a77e1dd2b71d876f986f1b91c 506 SUPERFAMILY SSF52540 272 491 2.66E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_22775 a240441a77e1dd2b71d876f986f1b91c 506 ProSitePatterns PS00211 ABC transporters family signature. 402 416 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_22775 a240441a77e1dd2b71d876f986f1b91c 506 Pfam PF00005 ABC transporter 25 174 3.3E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_22775 a240441a77e1dd2b71d876f986f1b91c 506 Gene3D G3DSA:3.40.50.300 267 504 1.7E-43 T 14-10-2018 DA442_22775 a240441a77e1dd2b71d876f986f1b91c 506 SUPERFAMILY SSF52540 9 227 1.28E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_08325 a4abe8bb68a25ec83a228c82b8560f7f 172 Gene3D G3DSA:3.10.129.10 2 172 8.8E-66 T 14-10-2018 DA442_08325 a4abe8bb68a25ec83a228c82b8560f7f 172 Pfam PF07977 FabA-like domain 29 158 3.0E-54 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DA442_08325 a4abe8bb68a25ec83a228c82b8560f7f 172 SUPERFAMILY SSF54637 4 169 5.47E-57 T 14-10-2018 IPR029069 HotDog domain superfamily DA442_08325 a4abe8bb68a25ec83a228c82b8560f7f 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 5.3E-92 T 14-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DA442_08325 a4abe8bb68a25ec83a228c82b8560f7f 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 51.377 T 14-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DA442_21445 4cf8a0244d0af61d5822cf53b1d1d8d5 392 SUPERFAMILY SSF53850 24 391 5.69E-90 T 14-10-2018 DA442_21445 4cf8a0244d0af61d5822cf53b1d1d8d5 392 Gene3D G3DSA:3.40.190.10 44 353 5.5E-135 T 14-10-2018 DA442_21445 4cf8a0244d0af61d5822cf53b1d1d8d5 392 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 129 146 - T 14-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 DA442_21445 4cf8a0244d0af61d5822cf53b1d1d8d5 392 Pfam PF13416 Bacterial extracellular solute-binding protein 46 317 2.3E-44 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein DA442_21445 4cf8a0244d0af61d5822cf53b1d1d8d5 392 Gene3D G3DSA:3.40.190.10 134 384 5.5E-135 T 14-10-2018 DA442_21445 4cf8a0244d0af61d5822cf53b1d1d8d5 392 PRINTS PR00181 Maltose binding protein signature 167 186 6.7E-80 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 DA442_21445 4cf8a0244d0af61d5822cf53b1d1d8d5 392 PRINTS PR00181 Maltose binding protein signature 32 50 6.7E-80 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 DA442_21445 4cf8a0244d0af61d5822cf53b1d1d8d5 392 PRINTS PR00181 Maltose binding protein signature 295 316 6.7E-80 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 DA442_21445 4cf8a0244d0af61d5822cf53b1d1d8d5 392 PRINTS PR00181 Maltose binding protein signature 66 84 6.7E-80 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 DA442_21445 4cf8a0244d0af61d5822cf53b1d1d8d5 392 PRINTS PR00181 Maltose binding protein signature 147 166 6.7E-80 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 DA442_21445 4cf8a0244d0af61d5822cf53b1d1d8d5 392 PRINTS PR00181 Maltose binding protein signature 126 145 6.7E-80 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 DA442_21445 4cf8a0244d0af61d5822cf53b1d1d8d5 392 PRINTS PR00181 Maltose binding protein signature 229 248 6.7E-80 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 DA442_21445 4cf8a0244d0af61d5822cf53b1d1d8d5 392 PRINTS PR00181 Maltose binding protein signature 353 372 6.7E-80 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 DA442_02750 49b32862ee127b4cca6c54059cbfe8dd 317 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 286 4.8E-98 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 DA442_02750 49b32862ee127b4cca6c54059cbfe8dd 317 Gene3D G3DSA:3.40.1010.20 6 283 2.3E-108 T 14-10-2018 DA442_02750 49b32862ee127b4cca6c54059cbfe8dd 317 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 288 37.972 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 DA442_02750 49b32862ee127b4cca6c54059cbfe8dd 317 Gene3D G3DSA:3.40.1010.20 97 198 2.3E-108 T 14-10-2018 DA442_02750 49b32862ee127b4cca6c54059cbfe8dd 317 Gene3D G3DSA:3.40.50.11270 12 96 2.3E-108 T 14-10-2018 DA442_02750 49b32862ee127b4cca6c54059cbfe8dd 317 Pfam PF02401 LytB protein 3 284 2.4E-92 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 DA442_03915 cb92fbe1b777b1bfb00686d04c982d2b 285 SUPERFAMILY SSF53335 7 279 2.2E-58 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_03915 cb92fbe1b777b1bfb00686d04c982d2b 285 Pfam PF13847 Methyltransferase domain 117 253 1.1E-18 T 14-10-2018 IPR025714 Methyltransferase domain DA442_03915 cb92fbe1b777b1bfb00686d04c982d2b 285 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 187 193 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DA442_03915 cb92fbe1b777b1bfb00686d04c982d2b 285 Gene3D G3DSA:3.40.50.150 91 283 6.0E-59 T 14-10-2018 DA442_03915 cb92fbe1b777b1bfb00686d04c982d2b 285 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 29 278 8.6E-94 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 DA442_03915 cb92fbe1b777b1bfb00686d04c982d2b 285 Gene3D G3DSA:1.10.8.10 6 90 2.4E-27 T 14-10-2018 DA442_03915 cb92fbe1b777b1bfb00686d04c982d2b 285 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 6 283 2.7E-81 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 DA442_03915 cb92fbe1b777b1bfb00686d04c982d2b 285 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 7 282 46.259 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 DA442_05510 b1f0f3c68a9406e4a91ec1293e2acc67 147 Gene3D G3DSA:3.30.420.270 63 136 1.4E-16 T 14-10-2018 DA442_05510 b1f0f3c68a9406e4a91ec1293e2acc67 147 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 144 9.4E-26 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 DA442_05510 b1f0f3c68a9406e4a91ec1293e2acc67 147 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 5 144 28.183 T 14-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 DA442_15530 75ab96704cbd899c47e0a2b399f96a9f 153 Pfam PF13690 Chemotaxis phosphatase CheX 42 139 4.8E-22 T 14-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain DA442_15530 75ab96704cbd899c47e0a2b399f96a9f 153 Gene3D G3DSA:3.40.1550.10 1 153 3.3E-46 T 14-10-2018 IPR028976 CheC-like superfamily DA442_15530 75ab96704cbd899c47e0a2b399f96a9f 153 SUPERFAMILY SSF103039 1 153 1.83E-38 T 14-10-2018 IPR028976 CheC-like superfamily DA442_04105 164f874138b3d929c22221d2ccb24cd4 249 SUPERFAMILY SSF117143 77 207 9.42E-16 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like DA442_04105 164f874138b3d929c22221d2ccb24cd4 249 Pfam PF00460 Flagella basal body rod protein 8 35 2.0E-5 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 DA442_04105 164f874138b3d929c22221d2ccb24cd4 249 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 3.4E-33 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G DA442_04105 164f874138b3d929c22221d2ccb24cd4 249 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 172 242 6.7E-22 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DA442_03350 0c585e881a0421f32dd8f2f561547574 424 Pfam PF00375 Sodium:dicarboxylate symporter family 6 404 9.8E-115 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DA442_03350 0c585e881a0421f32dd8f2f561547574 424 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 1.9E-37 T 14-10-2018 DA442_03350 0c585e881a0421f32dd8f2f561547574 424 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 1.9E-37 T 14-10-2018 DA442_03350 0c585e881a0421f32dd8f2f561547574 424 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 1.9E-37 T 14-10-2018 DA442_03350 0c585e881a0421f32dd8f2f561547574 424 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 1.9E-37 T 14-10-2018 DA442_03350 0c585e881a0421f32dd8f2f561547574 424 PRINTS PR00173 Glutamate-aspartate symporter signature 148 170 1.9E-37 T 14-10-2018 DA442_03350 0c585e881a0421f32dd8f2f561547574 424 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 1.9E-37 T 14-10-2018 DA442_03350 0c585e881a0421f32dd8f2f561547574 424 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 1.9E-37 T 14-10-2018 DA442_03350 0c585e881a0421f32dd8f2f561547574 424 PRINTS PR00173 Glutamate-aspartate symporter signature 359 379 1.9E-37 T 14-10-2018 DA442_03350 0c585e881a0421f32dd8f2f561547574 424 SUPERFAMILY SSF118215 5 406 2.62E-105 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 DA442_03350 0c585e881a0421f32dd8f2f561547574 424 Gene3D G3DSA:1.10.3860.10 1 422 9.0E-114 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 DA442_24755 02505d74d5524c138c9722e1fa2f3f4b 513 PRINTS PR00067 Catalase signature 345 371 7.2E-69 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DA442_24755 02505d74d5524c138c9722e1fa2f3f4b 513 PRINTS PR00067 Catalase signature 131 148 7.2E-69 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DA442_24755 02505d74d5524c138c9722e1fa2f3f4b 513 PRINTS PR00067 Catalase signature 150 168 7.2E-69 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DA442_24755 02505d74d5524c138c9722e1fa2f3f4b 513 PRINTS PR00067 Catalase signature 47 70 7.2E-69 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DA442_24755 02505d74d5524c138c9722e1fa2f3f4b 513 PRINTS PR00067 Catalase signature 110 128 7.2E-69 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DA442_24755 02505d74d5524c138c9722e1fa2f3f4b 513 PRINTS PR00067 Catalase signature 313 340 7.2E-69 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DA442_24755 02505d74d5524c138c9722e1fa2f3f4b 513 SMART SM01060 34 416 9.7E-241 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DA442_24755 02505d74d5524c138c9722e1fa2f3f4b 513 ProSitePatterns PS00438 Catalase proximal active site signature. 70 86 - T 14-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DA442_24755 02505d74d5524c138c9722e1fa2f3f4b 513 Pfam PF00199 Catalase 34 411 2.9E-167 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DA442_24755 02505d74d5524c138c9722e1fa2f3f4b 513 PIRSF PIRSF038928 24 506 3.0E-188 T 14-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DA442_24755 02505d74d5524c138c9722e1fa2f3f4b 513 SUPERFAMILY SSF56634 29 508 3.14E-191 T 14-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DA442_24755 02505d74d5524c138c9722e1fa2f3f4b 513 Pfam PF06628 Catalase-related immune-responsive 438 499 5.3E-19 T 14-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DA442_24755 02505d74d5524c138c9722e1fa2f3f4b 513 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 358 366 - T 14-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DA442_24755 02505d74d5524c138c9722e1fa2f3f4b 513 Gene3D G3DSA:2.40.180.10 30 513 7.6E-204 T 14-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 DA442_11230 7c685b30648f6ebf43461f73b601ad81 377 Gene3D G3DSA:1.10.287.470 90 176 3.1E-53 T 14-10-2018 DA442_11230 7c685b30648f6ebf43461f73b601ad81 377 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 35 368 9.6E-36 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DA442_11230 7c685b30648f6ebf43461f73b601ad81 377 Gene3D G3DSA:2.40.30.170 45 307 3.1E-53 T 14-10-2018 DA442_11230 7c685b30648f6ebf43461f73b601ad81 377 Gene3D G3DSA:2.40.50.100 56 216 3.1E-53 T 14-10-2018 DA442_11230 7c685b30648f6ebf43461f73b601ad81 377 Gene3D G3DSA:2.40.420.20 40 367 3.1E-53 T 14-10-2018 DA442_11230 7c685b30648f6ebf43461f73b601ad81 377 SUPERFAMILY SSF111369 49 251 1.7E-15 T 14-10-2018 DA442_11230 7c685b30648f6ebf43461f73b601ad81 377 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 256 2.4E-16 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DA442_07405 e01676f6bc16a1bc3d7f0366e8505c6b 305 SUPERFAMILY SSF46785 2 79 6.53E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_07405 e01676f6bc16a1bc3d7f0366e8505c6b 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 6.6E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_07405 e01676f6bc16a1bc3d7f0366e8505c6b 305 Gene3D G3DSA:3.40.190.290 94 294 1.4E-16 T 14-10-2018 DA442_07405 e01676f6bc16a1bc3d7f0366e8505c6b 305 Gene3D G3DSA:1.10.10.10 1 85 1.1E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_07405 e01676f6bc16a1bc3d7f0366e8505c6b 305 SUPERFAMILY SSF53850 95 294 8.22E-15 T 14-10-2018 DA442_07405 e01676f6bc16a1bc3d7f0366e8505c6b 305 Pfam PF03466 LysR substrate binding domain 95 257 8.8E-15 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_18420 0b6611c363047b30a855caf715a388b1 205 Gene3D G3DSA:1.10.150.240 19 88 5.5E-40 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DA442_18420 0b6611c363047b30a855caf715a388b1 205 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 126 186 7.6E-13 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DA442_18420 0b6611c363047b30a855caf715a388b1 205 SUPERFAMILY SSF56784 7 199 9.47E-36 T 14-10-2018 IPR036412 HAD-like superfamily DA442_18420 0b6611c363047b30a855caf715a388b1 205 Pfam PF13419 Haloacid dehalogenase-like hydrolase 91 186 1.0E-12 T 14-10-2018 DA442_18420 0b6611c363047b30a855caf715a388b1 205 Gene3D G3DSA:3.40.50.1000 5 193 5.5E-40 T 14-10-2018 IPR023214 HAD superfamily DA442_18420 0b6611c363047b30a855caf715a388b1 205 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 101 114 9.6E-14 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DA442_18420 0b6611c363047b30a855caf715a388b1 205 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 132 148 9.6E-14 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DA442_18420 0b6611c363047b30a855caf715a388b1 205 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 150 170 9.6E-14 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DA442_18420 0b6611c363047b30a855caf715a388b1 205 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 9.6E-14 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DA442_18420 0b6611c363047b30a855caf715a388b1 205 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 177 190 9.6E-14 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DA442_08815 c857630992dce1293565b347a4251d2d 142 Gene3D G3DSA:3.30.1460.10 1 119 5.1E-22 T 14-10-2018 DA442_08815 c857630992dce1293565b347a4251d2d 142 Pfam PF05932 Tir chaperone protein (CesT) family 9 113 1.4E-6 T 14-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 DA442_08815 c857630992dce1293565b347a4251d2d 142 SUPERFAMILY SSF69635 4 120 1.2E-28 T 14-10-2018 DA442_19745 03f67e18cb6b29fda901900c1925bd0f 107 SUPERFAMILY SSF50022 1 106 5.84E-34 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DA442_19745 03f67e18cb6b29fda901900c1925bd0f 107 Gene3D G3DSA:2.102.10.10 1 107 4.2E-32 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DA442_19745 03f67e18cb6b29fda901900c1925bd0f 107 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 106 3.5E-39 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 DA442_19745 03f67e18cb6b29fda901900c1925bd0f 107 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 4 106 8.4E-34 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 DA442_16060 5b7c4a5d8e5c3069ae7fd5802dfbec59 181 SMART SM00479 7 180 1.5E-23 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DA442_16060 5b7c4a5d8e5c3069ae7fd5802dfbec59 181 Gene3D G3DSA:3.30.420.10 1 181 1.3E-74 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DA442_16060 5b7c4a5d8e5c3069ae7fd5802dfbec59 181 Pfam PF00929 Exonuclease 9 170 7.3E-37 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DA442_16060 5b7c4a5d8e5c3069ae7fd5802dfbec59 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 44.01 T 14-10-2018 IPR022894 Oligoribonuclease GO:0000175 DA442_16060 5b7c4a5d8e5c3069ae7fd5802dfbec59 181 SUPERFAMILY SSF53098 3 180 5.37E-49 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DA442_12880 fde6db52d5dac4d609533fb6b893c198 222 SUPERFAMILY SSF158682 81 221 6.93E-27 T 14-10-2018 IPR029024 TerB-like DA442_12880 fde6db52d5dac4d609533fb6b893c198 222 Pfam PF04391 Protein of unknown function (DUF533) 43 221 1.5E-61 T 14-10-2018 IPR007486 Inner membrane protein YebE DA442_12880 fde6db52d5dac4d609533fb6b893c198 222 Gene3D G3DSA:1.10.3680.10 98 222 6.8E-12 T 14-10-2018 IPR029024 TerB-like DA442_00340 b1195131c0588358bc2a77a8687b4d74 203 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 14-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 DA442_00340 b1195131c0588358bc2a77a8687b4d74 203 SUPERFAMILY SSF51569 3 201 8.61E-66 T 14-10-2018 DA442_00340 b1195131c0588358bc2a77a8687b4d74 203 Pfam PF01081 KDPG and KHG aldolase 5 197 1.1E-71 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 DA442_00340 b1195131c0588358bc2a77a8687b4d74 203 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 14-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 DA442_00340 b1195131c0588358bc2a77a8687b4d74 203 Gene3D G3DSA:3.20.20.70 1 203 1.6E-72 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_00340 b1195131c0588358bc2a77a8687b4d74 203 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 5 202 2.2E-82 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 DA442_13380 c0b05929f5d38700ef3c4aff5498310b 459 Gene3D G3DSA:3.30.230.10 328 459 6.0E-17 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DA442_13380 c0b05929f5d38700ef3c4aff5498310b 459 SUPERFAMILY SSF54211 257 456 4.17E-43 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DA442_13380 c0b05929f5d38700ef3c4aff5498310b 459 PRINTS PR01874 DNA repair protein radA signature 176 200 7.0E-94 T 14-10-2018 DA442_13380 c0b05929f5d38700ef3c4aff5498310b 459 PRINTS PR01874 DNA repair protein radA signature 324 347 7.0E-94 T 14-10-2018 DA442_13380 c0b05929f5d38700ef3c4aff5498310b 459 PRINTS PR01874 DNA repair protein radA signature 85 113 7.0E-94 T 14-10-2018 DA442_13380 c0b05929f5d38700ef3c4aff5498310b 459 PRINTS PR01874 DNA repair protein radA signature 215 243 7.0E-94 T 14-10-2018 DA442_13380 c0b05929f5d38700ef3c4aff5498310b 459 PRINTS PR01874 DNA repair protein radA signature 10 34 7.0E-94 T 14-10-2018 DA442_13380 c0b05929f5d38700ef3c4aff5498310b 459 PRINTS PR01874 DNA repair protein radA signature 126 143 7.0E-94 T 14-10-2018 DA442_13380 c0b05929f5d38700ef3c4aff5498310b 459 PRINTS PR01874 DNA repair protein radA signature 250 276 7.0E-94 T 14-10-2018 DA442_13380 c0b05929f5d38700ef3c4aff5498310b 459 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 453 2.2E-225 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 DA442_13380 c0b05929f5d38700ef3c4aff5498310b 459 Gene3D G3DSA:3.40.50.300 68 281 3.0E-37 T 14-10-2018 DA442_13380 c0b05929f5d38700ef3c4aff5498310b 459 SMART SM00382 93 246 5.5E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_13380 c0b05929f5d38700ef3c4aff5498310b 459 Hamap MF_01498 DNA repair protein RadA [radA]. 21 457 43.11 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 DA442_13380 c0b05929f5d38700ef3c4aff5498310b 459 Pfam PF13481 AAA domain 85 224 5.4E-13 T 14-10-2018 DA442_13380 c0b05929f5d38700ef3c4aff5498310b 459 Pfam PF13541 Subunit ChlI of Mg-chelatase 347 432 1.5E-9 T 14-10-2018 DA442_13380 c0b05929f5d38700ef3c4aff5498310b 459 SUPERFAMILY SSF52540 70 294 2.66E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_13265 a96117879453736e4f6c810a69e11a8b 477 Gene3D G3DSA:1.20.1740.10 4 471 2.5E-9 T 14-10-2018 DA442_13265 a96117879453736e4f6c810a69e11a8b 477 PIRSF PIRSF006060 1 476 1.1E-52 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DA442_13265 a96117879453736e4f6c810a69e11a8b 477 Pfam PF13520 Amino acid permease 11 443 2.5E-30 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DA442_23280 90897b51c82cd016356e0b8a10ba5002 257 Gene3D G3DSA:2.50.20.10 22 251 4.0E-40 T 14-10-2018 DA442_23280 90897b51c82cd016356e0b8a10ba5002 257 Pfam PF17131 Outer membrane lipoprotein-sorting protein 76 250 1.8E-37 T 14-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein DA442_23280 90897b51c82cd016356e0b8a10ba5002 257 PIRSF PIRSF028205 1 254 1.4E-118 T 14-10-2018 IPR011220 Uncharacterised conserved protein UCP028205 DA442_02050 5d8b534402a827c7e5dca1efe68a0690 422 Pfam PF05272 Virulence-associated protein E 107 284 5.6E-31 T 14-10-2018 IPR007936 Virulence-associated E DA442_20465 f8bb37d203f7825843349e8e4f569663 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 DA442_20465 f8bb37d203f7825843349e8e4f569663 384 Gene3D G3DSA:1.20.140.10 232 381 3.9E-53 T 14-10-2018 DA442_20465 f8bb37d203f7825843349e8e4f569663 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 377 9.1E-49 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 DA442_20465 f8bb37d203f7825843349e8e4f569663 384 Gene3D G3DSA:2.40.110.10 120 231 4.5E-41 T 14-10-2018 DA442_20465 f8bb37d203f7825843349e8e4f569663 384 Gene3D G3DSA:1.10.540.10 1 119 4.0E-34 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DA442_20465 f8bb37d203f7825843349e8e4f569663 384 SUPERFAMILY SSF47203 225 378 1.77E-58 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DA442_20465 f8bb37d203f7825843349e8e4f569663 384 SUPERFAMILY SSF56645 1 240 8.51E-77 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DA442_20465 f8bb37d203f7825843349e8e4f569663 384 PIRSF PIRSF016578 4 192 1.5E-10 T 14-10-2018 DA442_20465 f8bb37d203f7825843349e8e4f569663 384 PIRSF PIRSF016578 225 378 1.7E-13 T 14-10-2018 DA442_20465 f8bb37d203f7825843349e8e4f569663 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 1.3E-25 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 DA442_20465 f8bb37d203f7825843349e8e4f569663 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 6.9E-24 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 DA442_20465 f8bb37d203f7825843349e8e4f569663 384 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 DA442_01705 aa3924fa13034aa0e41a54dc9466e061 452 Pfam PF01225 Mur ligase family, catalytic domain 2 101 3.2E-18 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 DA442_01705 aa3924fa13034aa0e41a54dc9466e061 452 Gene3D G3DSA:3.90.190.20 314 450 2.1E-32 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DA442_01705 aa3924fa13034aa0e41a54dc9466e061 452 SUPERFAMILY SSF53244 311 448 5.76E-38 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DA442_01705 aa3924fa13034aa0e41a54dc9466e061 452 Gene3D G3DSA:3.40.1190.10 91 313 1.6E-57 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DA442_01705 aa3924fa13034aa0e41a54dc9466e061 452 SUPERFAMILY SSF51984 1 89 1.31E-22 T 14-10-2018 DA442_01705 aa3924fa13034aa0e41a54dc9466e061 452 Gene3D G3DSA:3.40.50.720 1 90 9.1E-36 T 14-10-2018 DA442_01705 aa3924fa13034aa0e41a54dc9466e061 452 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 449 59.316 T 14-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 DA442_01705 aa3924fa13034aa0e41a54dc9466e061 452 Pfam PF08245 Mur ligase middle domain 108 291 7.4E-22 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DA442_01705 aa3924fa13034aa0e41a54dc9466e061 452 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 4.2E-260 T 14-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 DA442_01705 aa3924fa13034aa0e41a54dc9466e061 452 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 386 3.8E-11 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 DA442_01705 aa3924fa13034aa0e41a54dc9466e061 452 SUPERFAMILY SSF53623 97 308 3.01E-53 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DA442_24120 3f57c60129a2129f5aa24dd63e83a844 463 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 14-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site DA442_24120 3f57c60129a2129f5aa24dd63e83a844 463 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 356 364 - T 14-10-2018 IPR018120 Glycoside hydrolase family 1, active site DA442_24120 3f57c60129a2129f5aa24dd63e83a844 463 Gene3D G3DSA:3.20.20.80 1 460 5.8E-151 T 14-10-2018 DA442_24120 3f57c60129a2129f5aa24dd63e83a844 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 292 306 2.6E-14 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DA442_24120 3f57c60129a2129f5aa24dd63e83a844 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 356 364 2.6E-14 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DA442_24120 3f57c60129a2129f5aa24dd63e83a844 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 398 415 2.6E-14 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DA442_24120 3f57c60129a2129f5aa24dd63e83a844 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 423 435 2.6E-14 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DA442_24120 3f57c60129a2129f5aa24dd63e83a844 463 PRINTS PR00131 Glycosyl hydrolase family 1 signature 377 388 2.6E-14 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DA442_24120 3f57c60129a2129f5aa24dd63e83a844 463 Pfam PF00232 Glycosyl hydrolase family 1 3 457 4.1E-149 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DA442_24120 3f57c60129a2129f5aa24dd63e83a844 463 SUPERFAMILY SSF51445 1 455 3.02E-159 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DA442_14765 53e00e768533ae46a41ef4a50d4a758e 368 Gene3D G3DSA:3.30.450.90 1 97 2.9E-23 T 14-10-2018 DA442_14765 53e00e768533ae46a41ef4a50d4a758e 368 Gene3D G3DSA:3.40.50.300 99 356 5.8E-87 T 14-10-2018 DA442_14765 53e00e768533ae46a41ef4a50d4a758e 368 Pfam PF00437 Type II/IV secretion system protein 116 268 3.4E-36 T 14-10-2018 IPR001482 Type II/IV secretion system protein DA442_14765 53e00e768533ae46a41ef4a50d4a758e 368 SUPERFAMILY SSF52540 4 334 6.34E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_14765 53e00e768533ae46a41ef4a50d4a758e 368 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 3.4E-126 T 14-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 DA442_02915 0e9d1278d18251e4f9c7a9206755ddcc 110 Gene3D G3DSA:3.30.429.10 1 110 1.4E-44 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily DA442_02915 0e9d1278d18251e4f9c7a9206755ddcc 110 SUPERFAMILY SSF55331 1 110 7.32E-38 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily DA442_02915 0e9d1278d18251e4f9c7a9206755ddcc 110 Pfam PF08921 Domain of unknown function (DUF1904) 1 109 2.4E-38 T 14-10-2018 IPR015017 Protein of unknown function DUF1904 DA442_13005 3d8326e167c6de9e3e26006fff319c5a 194 Pfam PF04542 Sigma-70 region 2 34 99 4.0E-17 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DA442_13005 3d8326e167c6de9e3e26006fff319c5a 194 SUPERFAMILY SSF88659 127 189 1.35E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DA442_13005 3d8326e167c6de9e3e26006fff319c5a 194 Pfam PF04545 Sigma-70, region 4 139 187 1.4E-13 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 DA442_13005 3d8326e167c6de9e3e26006fff319c5a 194 Gene3D G3DSA:1.10.10.10 103 191 4.4E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_13005 3d8326e167c6de9e3e26006fff319c5a 194 Gene3D G3DSA:1.10.1740.10 13 96 6.7E-24 T 14-10-2018 DA442_13005 3d8326e167c6de9e3e26006fff319c5a 194 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 27 188 2.5E-30 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DA442_13005 3d8326e167c6de9e3e26006fff319c5a 194 SUPERFAMILY SSF88946 8 118 3.14E-26 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DA442_25580 166df5f01c25a21c9eab856b42d33837 1046 SUPERFAMILY SSF82866 294 498 6.8E-43 T 14-10-2018 DA442_25580 166df5f01c25a21c9eab856b42d33837 1046 Gene3D G3DSA:3.30.2090.10 716 804 1.7E-275 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DA442_25580 166df5f01c25a21c9eab856b42d33837 1046 SUPERFAMILY SSF82866 798 1038 5.89E-52 T 14-10-2018 DA442_25580 166df5f01c25a21c9eab856b42d33837 1046 Gene3D G3DSA:3.30.2090.10 182 274 1.7E-275 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DA442_25580 166df5f01c25a21c9eab856b42d33837 1046 SUPERFAMILY SSF82714 185 269 3.27E-17 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DA442_25580 166df5f01c25a21c9eab856b42d33837 1046 SUPERFAMILY SSF82693 46 127 5.49E-20 T 14-10-2018 DA442_25580 166df5f01c25a21c9eab856b42d33837 1046 Gene3D G3DSA:3.30.70.1440 665 862 1.7E-275 T 14-10-2018 DA442_25580 166df5f01c25a21c9eab856b42d33837 1046 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 2.7E-32 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_25580 166df5f01c25a21c9eab856b42d33837 1046 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 2.7E-32 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_25580 166df5f01c25a21c9eab856b42d33837 1046 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 2.7E-32 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_25580 166df5f01c25a21c9eab856b42d33837 1046 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 2.7E-32 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_25580 166df5f01c25a21c9eab856b42d33837 1046 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 2.7E-32 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_25580 166df5f01c25a21c9eab856b42d33837 1046 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 2.7E-32 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_25580 166df5f01c25a21c9eab856b42d33837 1046 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 2.7E-32 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_25580 166df5f01c25a21c9eab856b42d33837 1046 Gene3D G3DSA:3.30.70.1430 562 664 1.7E-275 T 14-10-2018 DA442_25580 166df5f01c25a21c9eab856b42d33837 1046 Gene3D G3DSA:3.30.70.1320 135 328 1.7E-275 T 14-10-2018 DA442_25580 166df5f01c25a21c9eab856b42d33837 1046 SUPERFAMILY SSF82714 716 800 3.27E-18 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DA442_25580 166df5f01c25a21c9eab856b42d33837 1046 Gene3D G3DSA:1.20.1640.10 15 508 1.7E-275 T 14-10-2018 DA442_25580 166df5f01c25a21c9eab856b42d33837 1046 Gene3D G3DSA:3.30.70.1430 42 812 1.7E-275 T 14-10-2018 DA442_25580 166df5f01c25a21c9eab856b42d33837 1046 SUPERFAMILY SSF82693 137 328 3.66E-23 T 14-10-2018 DA442_25580 166df5f01c25a21c9eab856b42d33837 1046 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1042 0.0 T 14-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 DA442_25580 166df5f01c25a21c9eab856b42d33837 1046 Gene3D G3DSA:1.20.1640.10 509 1030 1.7E-275 T 14-10-2018 DA442_25580 166df5f01c25a21c9eab856b42d33837 1046 Pfam PF00873 AcrB/AcrD/AcrF family 5 1032 6.3E-245 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DA442_07045 98a2038dbbd1cf8d88d3d8207f720445 70 PRINTS PR00050 Cold shock protein signature 43 61 3.8E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DA442_07045 98a2038dbbd1cf8d88d3d8207f720445 70 PRINTS PR00050 Cold shock protein signature 28 37 3.8E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DA442_07045 98a2038dbbd1cf8d88d3d8207f720445 70 PRINTS PR00050 Cold shock protein signature 7 22 3.8E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DA442_07045 98a2038dbbd1cf8d88d3d8207f720445 70 PIRSF PIRSF002599 1 70 1.5E-23 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 DA442_07045 98a2038dbbd1cf8d88d3d8207f720445 70 SUPERFAMILY SSF50249 4 69 1.09E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_07045 98a2038dbbd1cf8d88d3d8207f720445 70 Gene3D G3DSA:2.40.50.140 2 69 5.6E-27 T 14-10-2018 DA442_07045 98a2038dbbd1cf8d88d3d8207f720445 70 SMART SM00357 6 70 1.3E-25 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 DA442_07045 98a2038dbbd1cf8d88d3d8207f720445 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 69 5.3E-27 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DA442_15050 47b07e49389aa29003c8779425daf234 301 Pfam PF12802 MarR family 29 85 3.1E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DA442_15050 47b07e49389aa29003c8779425daf234 301 Gene3D G3DSA:3.40.630.30 144 301 1.1E-24 T 14-10-2018 DA442_15050 47b07e49389aa29003c8779425daf234 301 SMART SM00347 22 121 3.5E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DA442_15050 47b07e49389aa29003c8779425daf234 301 ProSitePatterns PS01117 MarR-type HTH domain signature. 60 94 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site DA442_15050 47b07e49389aa29003c8779425daf234 301 PRINTS PR00598 Bacterial regulatory protein MarR family signature 62 77 4.1E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DA442_15050 47b07e49389aa29003c8779425daf234 301 PRINTS PR00598 Bacterial regulatory protein MarR family signature 81 97 4.1E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DA442_15050 47b07e49389aa29003c8779425daf234 301 PRINTS PR00598 Bacterial regulatory protein MarR family signature 45 61 4.1E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DA442_15050 47b07e49389aa29003c8779425daf234 301 SUPERFAMILY SSF55729 144 301 7.72E-29 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_15050 47b07e49389aa29003c8779425daf234 301 SUPERFAMILY SSF46785 6 135 3.33E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_15050 47b07e49389aa29003c8779425daf234 301 Pfam PF00583 Acetyltransferase (GNAT) family 193 278 1.6E-14 T 14-10-2018 IPR000182 GNAT domain DA442_15050 47b07e49389aa29003c8779425daf234 301 Gene3D G3DSA:1.10.10.10 2 137 2.1E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_14695 386471d494c7dd86b74663bba0bb7ced 386 Gene3D G3DSA:3.40.50.1260 10 379 5.7E-151 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_14695 386471d494c7dd86b74663bba0bb7ced 386 Gene3D G3DSA:3.40.50.1260 165 373 5.7E-151 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_14695 386471d494c7dd86b74663bba0bb7ced 386 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 14-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_14695 386471d494c7dd86b74663bba0bb7ced 386 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 38.313 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_14695 386471d494c7dd86b74663bba0bb7ced 386 Pfam PF00162 Phosphoglycerate kinase 6 373 2.4E-138 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_14695 386471d494c7dd86b74663bba0bb7ced 386 PIRSF PIRSF000724 1 386 5.4E-134 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_14695 386471d494c7dd86b74663bba0bb7ced 386 SUPERFAMILY SSF53748 3 382 4.48E-144 T 14-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_14695 386471d494c7dd86b74663bba0bb7ced 386 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 2.9E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_14695 386471d494c7dd86b74663bba0bb7ced 386 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 2.9E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_14695 386471d494c7dd86b74663bba0bb7ced 386 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 2.9E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_14695 386471d494c7dd86b74663bba0bb7ced 386 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 2.9E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_14695 386471d494c7dd86b74663bba0bb7ced 386 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 2.9E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_14695 386471d494c7dd86b74663bba0bb7ced 386 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 2.9E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_14695 386471d494c7dd86b74663bba0bb7ced 386 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 2.9E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_14695 386471d494c7dd86b74663bba0bb7ced 386 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 2.9E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_14695 386471d494c7dd86b74663bba0bb7ced 386 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 2.9E-82 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_03945 56fa85e59c1a33e62640ff53cdd61231 371 SUPERFAMILY SSF55174 8 60 3.36E-14 T 14-10-2018 DA442_03945 56fa85e59c1a33e62640ff53cdd61231 371 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 102 116 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 DA442_03945 56fa85e59c1a33e62640ff53cdd61231 371 SUPERFAMILY SSF55120 66 227 2.88E-38 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_03945 56fa85e59c1a33e62640ff53cdd61231 371 Pfam PF00849 RNA pseudouridylate synthase 67 193 2.5E-14 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_03945 56fa85e59c1a33e62640ff53cdd61231 371 Pfam PF01479 S4 domain 8 52 4.7E-10 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_03945 56fa85e59c1a33e62640ff53cdd61231 371 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 71 224 1.8E-48 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 DA442_03945 56fa85e59c1a33e62640ff53cdd61231 371 Gene3D G3DSA:3.10.290.10 1 61 8.5E-22 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DA442_03945 56fa85e59c1a33e62640ff53cdd61231 371 Gene3D G3DSA:3.30.70.580 68 227 3.7E-54 T 14-10-2018 DA442_03945 56fa85e59c1a33e62640ff53cdd61231 371 SMART SM00363 7 65 8.8E-11 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_03945 56fa85e59c1a33e62640ff53cdd61231 371 Gene3D G3DSA:3.30.70.1560 132 205 3.7E-54 T 14-10-2018 DA442_11285 0cb7764a0e5721fa3621b8be07531326 611 SMART SM00388 387 456 2.1E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_11285 0cb7764a0e5721fa3621b8be07531326 611 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 62 295 1.5E-35 T 14-10-2018 DA442_11285 0cb7764a0e5721fa3621b8be07531326 611 PRINTS PR00344 Bacterial sensor protein C-terminal signature 545 559 7.2E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_11285 0cb7764a0e5721fa3621b8be07531326 611 PRINTS PR00344 Bacterial sensor protein C-terminal signature 571 589 7.2E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_11285 0cb7764a0e5721fa3621b8be07531326 611 SUPERFAMILY SSF55874 445 609 4.45E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_11285 0cb7764a0e5721fa3621b8be07531326 611 SUPERFAMILY SSF47384 380 452 4.51E-9 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DA442_11285 0cb7764a0e5721fa3621b8be07531326 611 SUPERFAMILY SSF53850 64 291 4.98E-17 T 14-10-2018 DA442_11285 0cb7764a0e5721fa3621b8be07531326 611 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 499 609 1.1E-12 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_11285 0cb7764a0e5721fa3621b8be07531326 611 Gene3D G3DSA:3.40.190.10 137 244 2.5E-15 T 14-10-2018 DA442_11285 0cb7764a0e5721fa3621b8be07531326 611 Gene3D G3DSA:1.10.287.130 393 453 7.3E-18 T 14-10-2018 DA442_11285 0cb7764a0e5721fa3621b8be07531326 611 Gene3D G3DSA:3.30.565.10 457 611 1.1E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_11285 0cb7764a0e5721fa3621b8be07531326 611 SMART SM00387 498 611 2.6E-12 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_11285 0cb7764a0e5721fa3621b8be07531326 611 Pfam PF00512 His Kinase A (phospho-acceptor) domain 393 452 4.1E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_11285 0cb7764a0e5721fa3621b8be07531326 611 Gene3D G3DSA:3.40.190.10 60 136 2.5E-15 T 14-10-2018 DA442_14480 2c20491768ed4fbf407b0a818e9daa48 234 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 105 112 - T 14-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 DA442_14480 2c20491768ed4fbf407b0a818e9daa48 234 Gene3D G3DSA:3.90.550.10 3 233 3.4E-77 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DA442_14480 2c20491768ed4fbf407b0a818e9daa48 234 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 9 230 9.5E-78 T 14-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 DA442_14480 2c20491768ed4fbf407b0a818e9daa48 234 SUPERFAMILY SSF53448 9 230 2.41E-63 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DA442_14480 2c20491768ed4fbf407b0a818e9daa48 234 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 7 229 43.508 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 DA442_14480 2c20491768ed4fbf407b0a818e9daa48 234 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 10 229 5.1E-79 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 DA442_02595 f2c1fd279d53bea622433a2398600a38 239 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 9 239 53.713 T 14-10-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 DA442_02595 f2c1fd279d53bea622433a2398600a38 239 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 114 120 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DA442_02595 f2c1fd279d53bea622433a2398600a38 239 Gene3D G3DSA:3.40.50.150 7 235 1.5E-54 T 14-10-2018 DA442_02595 f2c1fd279d53bea622433a2398600a38 239 Pfam PF05175 Methyltransferase small domain 42 129 3.5E-17 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 DA442_02595 f2c1fd279d53bea622433a2398600a38 239 SUPERFAMILY SSF53335 35 190 2.09E-30 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_08235 c203788d58cd1df88901c6707696cd66 315 Pfam PF00582 Universal stress protein family 4 148 1.3E-14 T 14-10-2018 IPR006016 UspA DA442_08235 c203788d58cd1df88901c6707696cd66 315 Pfam PF00582 Universal stress protein family 177 301 1.1E-15 T 14-10-2018 IPR006016 UspA DA442_08235 c203788d58cd1df88901c6707696cd66 315 SUPERFAMILY SSF52402 4 158 4.02E-26 T 14-10-2018 DA442_08235 c203788d58cd1df88901c6707696cd66 315 SUPERFAMILY SSF52402 158 308 2.76E-24 T 14-10-2018 DA442_08235 c203788d58cd1df88901c6707696cd66 315 Gene3D G3DSA:3.40.50.12370 1 313 1.3E-113 T 14-10-2018 DA442_05885 0414c3b016e332afcd1d58d8cd333edf 167 Gene3D G3DSA:3.10.450.50 1 167 4.4E-54 T 14-10-2018 DA442_05885 0414c3b016e332afcd1d58d8cd333edf 167 Pfam PF02810 SEC-C motif 4 18 1.6E-4 T 14-10-2018 IPR004027 SEC-C motif DA442_05885 0414c3b016e332afcd1d58d8cd333edf 167 Pfam PF02810 SEC-C motif 150 167 4.9E-10 T 14-10-2018 IPR004027 SEC-C motif DA442_05885 0414c3b016e332afcd1d58d8cd333edf 167 SUPERFAMILY SSF54427 28 128 1.66E-33 T 14-10-2018 IPR032710 NTF2-like domain superfamily DA442_05885 0414c3b016e332afcd1d58d8cd333edf 167 SUPERFAMILY SSF103642 147 167 3.27E-8 T 14-10-2018 DA442_05885 0414c3b016e332afcd1d58d8cd333edf 167 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 1 127 26.102 T 14-10-2018 IPR023006 Uncharacterised protein family UPF0225 DA442_04485 4db0df5d0e9eac2bdf71233d0efc5e29 75 SUPERFAMILY SSF50037 4 74 2.52E-19 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal DA442_04485 4db0df5d0e9eac2bdf71233d0efc5e29 75 Pfam PF04023 FeoA domain 1 74 2.9E-19 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 DA442_04485 4db0df5d0e9eac2bdf71233d0efc5e29 75 Gene3D G3DSA:2.30.30.90 1 75 3.7E-24 T 14-10-2018 IPR038157 Ferrous iron transporter, core domain DA442_04485 4db0df5d0e9eac2bdf71233d0efc5e29 75 SMART SM00899 1 74 5.6E-24 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 DA442_15115 93be22db89a161c43efe39f92aff81ea 106 SUPERFAMILY SSF52091 14 97 8.83E-15 T 14-10-2018 IPR036513 STAS domain superfamily DA442_15115 93be22db89a161c43efe39f92aff81ea 106 Pfam PF13466 STAS domain 15 93 1.2E-19 T 14-10-2018 IPR002645 STAS domain DA442_15115 93be22db89a161c43efe39f92aff81ea 106 Gene3D G3DSA:3.30.750.24 8 102 4.1E-12 T 14-10-2018 IPR036513 STAS domain superfamily DA442_19105 41586a260cacefafe01062a6e2008b55 421 Gene3D G3DSA:3.40.50.300 215 383 2.6E-47 T 14-10-2018 DA442_19105 41586a260cacefafe01062a6e2008b55 421 Pfam PF00270 DEAD/DEAH box helicase 31 198 8.5E-56 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DA442_19105 41586a260cacefafe01062a6e2008b55 421 SMART SM00490 261 342 9.6E-31 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_19105 41586a260cacefafe01062a6e2008b55 421 SMART SM00487 26 225 1.0E-62 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DA442_19105 41586a260cacefafe01062a6e2008b55 421 Pfam PF00271 Helicase conserved C-terminal domain 237 342 3.5E-27 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_19105 41586a260cacefafe01062a6e2008b55 421 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 156 164 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DA442_19105 41586a260cacefafe01062a6e2008b55 421 SUPERFAMILY SSF52540 78 363 4.22E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_19105 41586a260cacefafe01062a6e2008b55 421 Gene3D G3DSA:3.40.50.300 5 213 6.2E-79 T 14-10-2018 DA442_16185 70c3159df12c220e1b0f3e1ef3c9541e 404 Pfam PF00842 Alanine racemase, C-terminal domain 277 403 3.1E-31 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DA442_16185 70c3159df12c220e1b0f3e1ef3c9541e 404 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 69 79 - T 14-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DA442_16185 70c3159df12c220e1b0f3e1ef3c9541e 404 Gene3D G3DSA:2.40.37.10 41 400 4.8E-127 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DA442_16185 70c3159df12c220e1b0f3e1ef3c9541e 404 Pfam PF01168 Alanine racemase, N-terminal domain 45 268 3.3E-46 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DA442_16185 70c3159df12c220e1b0f3e1ef3c9541e 404 Gene3D G3DSA:3.20.20.10 47 264 4.8E-127 T 14-10-2018 IPR029066 PLP-binding barrel DA442_16185 70c3159df12c220e1b0f3e1ef3c9541e 404 Hamap MF_01201 Alanine racemase. 38 404 24.937 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DA442_16185 70c3159df12c220e1b0f3e1ef3c9541e 404 SUPERFAMILY SSF50621 269 403 2.27E-39 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DA442_16185 70c3159df12c220e1b0f3e1ef3c9541e 404 TIGRFAM TIGR00492 alr: alanine racemase 41 390 1.3E-65 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DA442_16185 70c3159df12c220e1b0f3e1ef3c9541e 404 PRINTS PR00992 Alanine racemase signature 162 174 6.0E-32 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DA442_16185 70c3159df12c220e1b0f3e1ef3c9541e 404 PRINTS PR00992 Alanine racemase signature 330 347 6.0E-32 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DA442_16185 70c3159df12c220e1b0f3e1ef3c9541e 404 PRINTS PR00992 Alanine racemase signature 309 324 6.0E-32 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DA442_16185 70c3159df12c220e1b0f3e1ef3c9541e 404 PRINTS PR00992 Alanine racemase signature 64 80 6.0E-32 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DA442_16185 70c3159df12c220e1b0f3e1ef3c9541e 404 PRINTS PR00992 Alanine racemase signature 100 118 6.0E-32 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DA442_16185 70c3159df12c220e1b0f3e1ef3c9541e 404 PRINTS PR00992 Alanine racemase signature 241 268 6.0E-32 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DA442_16185 70c3159df12c220e1b0f3e1ef3c9541e 404 PRINTS PR00992 Alanine racemase signature 198 209 6.0E-32 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DA442_16185 70c3159df12c220e1b0f3e1ef3c9541e 404 SUPERFAMILY SSF51419 45 276 2.22E-44 T 14-10-2018 IPR029066 PLP-binding barrel DA442_16185 70c3159df12c220e1b0f3e1ef3c9541e 404 SMART SM01005 276 404 1.5E-45 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DA442_13890 b56faf693d6bb4214387811b73ef11eb 131 Gene3D G3DSA:3.30.300.20 1 106 2.2E-35 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta DA442_13890 b56faf693d6bb4214387811b73ef11eb 131 SUPERFAMILY SSF89919 2 105 4.32E-32 T 14-10-2018 IPR023799 Ribosome-binding factor A domain superfamily DA442_13890 b56faf693d6bb4214387811b73ef11eb 131 Pfam PF02033 Ribosome-binding factor A 7 110 1.4E-30 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 DA442_13890 b56faf693d6bb4214387811b73ef11eb 131 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 98 2.0E-47 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 DA442_13890 b56faf693d6bb4214387811b73ef11eb 131 ProSitePatterns PS01319 Ribosome-binding factor A signature. 77 98 - T 14-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 DA442_13890 b56faf693d6bb4214387811b73ef11eb 131 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 116 1.8E-35 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 DA442_13890 b56faf693d6bb4214387811b73ef11eb 131 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 111 26.662 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 DA442_00590 3b4a6001b18e74760870e0c7e196e738 180 Pfam PF04220 Der GTPase activator (YihI) 21 170 7.8E-46 T 14-10-2018 IPR007336 Der GTPase activator GO:0005096 DA442_00590 3b4a6001b18e74760870e0c7e196e738 180 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 173 16.485 T 14-10-2018 IPR007336 Der GTPase activator GO:0005096 DA442_06285 e17fd3cea2daff38256cdd8940a3fed0 223 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_06285 e17fd3cea2daff38256cdd8940a3fed0 223 Pfam PF00005 ABC transporter 21 167 6.2E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_06285 e17fd3cea2daff38256cdd8940a3fed0 223 SUPERFAMILY SSF52540 1 217 2.23E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_06285 e17fd3cea2daff38256cdd8940a3fed0 223 SMART SM00382 30 218 5.9E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_06285 e17fd3cea2daff38256cdd8940a3fed0 223 Gene3D G3DSA:3.40.50.300 1 223 1.4E-57 T 14-10-2018 DA442_03130 cb26f2dc5f2a65bd0d6afbcdf33fc71a 432 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 276 283 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 DA442_03130 cb26f2dc5f2a65bd0d6afbcdf33fc71a 432 Pfam PF12404 Peptidase 5 81 3.6E-34 T 14-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 DA442_03130 cb26f2dc5f2a65bd0d6afbcdf33fc71a 432 Hamap MF_00504 Peptidase B [pepB]. 3 428 66.325 T 14-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 DA442_03130 cb26f2dc5f2a65bd0d6afbcdf33fc71a 432 PIRSF PIRSF036388 1 432 6.4E-224 T 14-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 DA442_03130 cb26f2dc5f2a65bd0d6afbcdf33fc71a 432 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 109 422 4.2E-103 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 DA442_03130 cb26f2dc5f2a65bd0d6afbcdf33fc71a 432 SUPERFAMILY SSF53187 105 428 4.08E-101 T 14-10-2018 DA442_03130 cb26f2dc5f2a65bd0d6afbcdf33fc71a 432 PRINTS PR00481 Cytosol aminopeptidase signature 272 292 2.7E-45 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DA442_03130 cb26f2dc5f2a65bd0d6afbcdf33fc71a 432 PRINTS PR00481 Cytosol aminopeptidase signature 191 208 2.7E-45 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DA442_03130 cb26f2dc5f2a65bd0d6afbcdf33fc71a 432 PRINTS PR00481 Cytosol aminopeptidase signature 250 271 2.7E-45 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DA442_03130 cb26f2dc5f2a65bd0d6afbcdf33fc71a 432 PRINTS PR00481 Cytosol aminopeptidase signature 300 315 2.7E-45 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DA442_03130 cb26f2dc5f2a65bd0d6afbcdf33fc71a 432 PRINTS PR00481 Cytosol aminopeptidase signature 213 234 2.7E-45 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DA442_03130 cb26f2dc5f2a65bd0d6afbcdf33fc71a 432 Gene3D G3DSA:3.40.630.10 91 432 2.8E-107 T 14-10-2018 DA442_17905 13e00644fbefd05921046a6519c08be8 267 Pfam PF12833 Helix-turn-helix domain 185 262 9.9E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_17905 13e00644fbefd05921046a6519c08be8 267 SUPERFAMILY SSF46689 215 264 7.17E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_17905 13e00644fbefd05921046a6519c08be8 267 SUPERFAMILY SSF51215 24 148 9.81E-7 T 14-10-2018 IPR037923 Transcription regulator HTH-like DA442_17905 13e00644fbefd05921046a6519c08be8 267 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 261 8.0E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DA442_17905 13e00644fbefd05921046a6519c08be8 267 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 230 245 8.0E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DA442_17905 13e00644fbefd05921046a6519c08be8 267 Gene3D G3DSA:1.10.10.60 160 265 1.5E-28 T 14-10-2018 DA442_17905 13e00644fbefd05921046a6519c08be8 267 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 215 257 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DA442_17905 13e00644fbefd05921046a6519c08be8 267 SMART SM00342 179 261 9.6E-28 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_12950 85a3bd980ff96eea1e3fa3cbb8f797e1 210 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 195 2.6E-62 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 DA442_12950 85a3bd980ff96eea1e3fa3cbb8f797e1 210 PIRSF PIRSF006102 3 210 5.4E-73 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 DA442_12950 85a3bd980ff96eea1e3fa3cbb8f797e1 210 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 36.857 T 14-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 DA442_12950 85a3bd980ff96eea1e3fa3cbb8f797e1 210 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 3 207 1.5E-109 T 14-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 DA442_01910 0550c9ce3ee3a6e907d35f5f8a4dae99 222 SUPERFAMILY SSF46785 4 74 2.47E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_01910 0550c9ce3ee3a6e907d35f5f8a4dae99 222 Gene3D G3DSA:1.10.10.10 2 71 9.2E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_01910 0550c9ce3ee3a6e907d35f5f8a4dae99 222 SMART SM00345 12 70 1.1E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_01910 0550c9ce3ee3a6e907d35f5f8a4dae99 222 SUPERFAMILY SSF48008 77 215 4.71E-7 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DA442_01910 0550c9ce3ee3a6e907d35f5f8a4dae99 222 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 70 2.1E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_01910 0550c9ce3ee3a6e907d35f5f8a4dae99 222 Gene3D G3DSA:1.20.120.530 75 220 1.1E-7 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DA442_01910 0550c9ce3ee3a6e907d35f5f8a4dae99 222 Pfam PF07729 FCD domain 80 207 3.1E-7 T 14-10-2018 IPR011711 GntR, C-terminal DA442_10925 c8597f2beea44b40d98bed9f14b47cde 958 Gene3D G3DSA:1.20.1650.10 463 560 7.6E-48 T 14-10-2018 DA442_10925 c8597f2beea44b40d98bed9f14b47cde 958 Gene3D G3DSA:3.40.640.10 87 355 3.4E-131 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_10925 c8597f2beea44b40d98bed9f14b47cde 958 Gene3D G3DSA:3.90.1150.10 561 948 5.5E-144 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DA442_10925 c8597f2beea44b40d98bed9f14b47cde 958 Pfam PF00202 Aminotransferase class-III 51 464 1.4E-93 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DA442_10925 c8597f2beea44b40d98bed9f14b47cde 958 SUPERFAMILY SSF53383 42 464 1.75E-112 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_10925 c8597f2beea44b40d98bed9f14b47cde 958 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 532 892 1.3E-60 T 14-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 DA442_10925 c8597f2beea44b40d98bed9f14b47cde 958 Gene3D G3DSA:3.90.1150.10 38 462 3.4E-131 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DA442_10925 c8597f2beea44b40d98bed9f14b47cde 958 Gene3D G3DSA:3.40.640.10 575 843 5.5E-144 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_10925 c8597f2beea44b40d98bed9f14b47cde 958 SUPERFAMILY SSF53383 499 951 2.57E-112 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_10925 c8597f2beea44b40d98bed9f14b47cde 958 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 34 466 2.2E-160 T 14-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 DA442_22900 6b1234fe824733880a207a2469df24f8 310 Gene3D G3DSA:1.10.10.10 7 93 5.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_22900 6b1234fe824733880a207a2469df24f8 310 SUPERFAMILY SSF53850 91 307 2.71E-34 T 14-10-2018 DA442_22900 6b1234fe824733880a207a2469df24f8 310 SUPERFAMILY SSF46785 11 113 4.88E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_22900 6b1234fe824733880a207a2469df24f8 310 Gene3D G3DSA:3.40.190.10 163 274 6.4E-48 T 14-10-2018 DA442_22900 6b1234fe824733880a207a2469df24f8 310 Gene3D G3DSA:3.40.190.10 103 300 6.4E-48 T 14-10-2018 DA442_22900 6b1234fe824733880a207a2469df24f8 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.6E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_22900 6b1234fe824733880a207a2469df24f8 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.6E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_22900 6b1234fe824733880a207a2469df24f8 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.6E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_22900 6b1234fe824733880a207a2469df24f8 310 Pfam PF03466 LysR substrate binding domain 91 304 6.3E-35 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_22900 6b1234fe824733880a207a2469df24f8 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 7.0E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_02710 38efcf6c4bbcb7fcc33efd381b0b53f4 98 SMART SM00418 15 93 5.2E-28 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DA442_02710 38efcf6c4bbcb7fcc33efd381b0b53f4 98 Pfam PF01022 Bacterial regulatory protein, arsR family 23 67 3.3E-16 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DA442_02710 38efcf6c4bbcb7fcc33efd381b0b53f4 98 SUPERFAMILY SSF46785 9 96 2.92E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_02710 38efcf6c4bbcb7fcc33efd381b0b53f4 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 47 7.7E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DA442_02710 38efcf6c4bbcb7fcc33efd381b0b53f4 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 7.7E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DA442_02710 38efcf6c4bbcb7fcc33efd381b0b53f4 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 7.7E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DA442_02710 38efcf6c4bbcb7fcc33efd381b0b53f4 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 7.7E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DA442_02710 38efcf6c4bbcb7fcc33efd381b0b53f4 98 Gene3D G3DSA:1.10.10.10 1 98 1.2E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_19650 f5c9b5df8d0444b0a37ec0555d5965f3 420 Gene3D G3DSA:3.30.70.420 146 261 5.8E-109 T 14-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 DA442_19650 f5c9b5df8d0444b0a37ec0555d5965f3 420 ProSitePatterns PS00318 Hydroxymethylglutaryl-coenzyme A reductases signature 2. 356 363 - T 14-10-2018 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 DA442_19650 f5c9b5df8d0444b0a37ec0555d5965f3 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 81 102 4.9E-39 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 DA442_19650 f5c9b5df8d0444b0a37ec0555d5965f3 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 344 365 4.9E-39 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 DA442_19650 f5c9b5df8d0444b0a37ec0555d5965f3 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 112 132 4.9E-39 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 DA442_19650 f5c9b5df8d0444b0a37ec0555d5965f3 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 201 219 4.9E-39 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 DA442_19650 f5c9b5df8d0444b0a37ec0555d5965f3 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 291 317 4.9E-39 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 DA442_19650 f5c9b5df8d0444b0a37ec0555d5965f3 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 242 267 4.9E-39 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 DA442_19650 f5c9b5df8d0444b0a37ec0555d5965f3 420 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 51 419 9.9E-112 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 DA442_19650 f5c9b5df8d0444b0a37ec0555d5965f3 420 Gene3D G3DSA:3.90.770.10 92 405 5.8E-109 T 14-10-2018 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain superfamily GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 DA442_19650 f5c9b5df8d0444b0a37ec0555d5965f3 420 SUPERFAMILY SSF55035 146 261 2.88E-36 T 14-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 DA442_19650 f5c9b5df8d0444b0a37ec0555d5965f3 420 SUPERFAMILY SSF56542 26 409 1.15E-78 T 14-10-2018 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamily GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 DA442_20560 56f2928b77496d7c595a2756c06c9634 251 Gene3D G3DSA:3.10.310.10 114 245 6.1E-66 T 14-10-2018 DA442_20560 56f2928b77496d7c595a2756c06c9634 251 Gene3D G3DSA:3.10.310.10 6 246 6.1E-66 T 14-10-2018 DA442_20560 56f2928b77496d7c595a2756c06c9634 251 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 5 223 1.3E-25 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 DA442_20560 56f2928b77496d7c595a2756c06c9634 251 PIRSF PIRSF016184 1 250 3.4E-52 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 DA442_20560 56f2928b77496d7c595a2756c06c9634 251 SUPERFAMILY SSF54506 3 246 1.57E-60 T 14-10-2018 DA442_20560 56f2928b77496d7c595a2756c06c9634 251 Pfam PF02567 Phenazine biosynthesis-like protein 7 223 2.1E-38 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 DA442_18655 3c631513f1a6cd3b1d061bafc49e309d 104 SUPERFAMILY SSF103481 6 102 6.02E-18 T 14-10-2018 DA442_18655 3c631513f1a6cd3b1d061bafc49e309d 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 6.9E-26 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 DA442_18655 3c631513f1a6cd3b1d061bafc49e309d 104 Gene3D G3DSA:1.10.3730.20 1 104 4.1E-30 T 14-10-2018 DA442_15110 cc5c0fb71aa223afc63d92251587f5b9 84 PIRSF PIRSF003113 2 83 1.7E-22 T 14-10-2018 IPR002634 BolA protein DA442_15110 cc5c0fb71aa223afc63d92251587f5b9 84 Pfam PF01722 BolA-like protein 18 74 9.4E-15 T 14-10-2018 IPR002634 BolA protein DA442_15110 cc5c0fb71aa223afc63d92251587f5b9 84 Gene3D G3DSA:3.30.300.90 1 84 1.9E-33 T 14-10-2018 DA442_15110 cc5c0fb71aa223afc63d92251587f5b9 84 SUPERFAMILY SSF82657 4 82 1.57E-28 T 14-10-2018 IPR036065 BolA-like superfamily DA442_10635 20e031c83e0f4dd89a9e9990d2e377d1 566 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 316 426 1.1E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_10635 20e031c83e0f4dd89a9e9990d2e377d1 566 SMART SM00388 204 269 8.3E-21 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_10635 20e031c83e0f4dd89a9e9990d2e377d1 566 Pfam PF00072 Response regulator receiver domain 451 558 1.2E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_10635 20e031c83e0f4dd89a9e9990d2e377d1 566 SUPERFAMILY SSF55874 258 425 1.06E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_10635 20e031c83e0f4dd89a9e9990d2e377d1 566 Gene3D G3DSA:3.30.565.10 268 430 1.5E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_10635 20e031c83e0f4dd89a9e9990d2e377d1 566 Pfam PF00512 His Kinase A (phospho-acceptor) domain 206 269 1.2E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_10635 20e031c83e0f4dd89a9e9990d2e377d1 566 Gene3D G3DSA:1.10.287.130 180 267 1.0E-22 T 14-10-2018 DA442_10635 20e031c83e0f4dd89a9e9990d2e377d1 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 424 1.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_10635 20e031c83e0f4dd89a9e9990d2e377d1 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 380 1.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_10635 20e031c83e0f4dd89a9e9990d2e377d1 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 366 1.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_10635 20e031c83e0f4dd89a9e9990d2e377d1 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 405 1.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_10635 20e031c83e0f4dd89a9e9990d2e377d1 566 SUPERFAMILY SSF52172 448 565 8.82E-34 T 14-10-2018 IPR011006 CheY-like superfamily DA442_10635 20e031c83e0f4dd89a9e9990d2e377d1 566 SMART SM00448 449 560 5.9E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_10635 20e031c83e0f4dd89a9e9990d2e377d1 566 Gene3D G3DSA:3.40.50.2300 447 566 4.1E-35 T 14-10-2018 DA442_10635 20e031c83e0f4dd89a9e9990d2e377d1 566 SUPERFAMILY SSF47384 193 269 1.39E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DA442_10635 20e031c83e0f4dd89a9e9990d2e377d1 566 SMART SM00387 316 427 1.0E-35 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_19835 9039dfdb71f07e6d1c0313b7f392e651 543 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 355 505 2.1E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_19835 9039dfdb71f07e6d1c0313b7f392e651 543 SMART SM00304 211 265 1.7E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_19835 9039dfdb71f07e6d1c0313b7f392e651 543 SMART SM00304 300 367 110.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_19835 9039dfdb71f07e6d1c0313b7f392e651 543 SMART SM00283 280 541 9.6E-72 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_19835 9039dfdb71f07e6d1c0313b7f392e651 543 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 176 3.4E-21 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain DA442_19835 9039dfdb71f07e6d1c0313b7f392e651 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 407 436 3.8E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DA442_19835 9039dfdb71f07e6d1c0313b7f392e651 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 6 31 3.8E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DA442_19835 9039dfdb71f07e6d1c0313b7f392e651 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 378 405 3.8E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DA442_19835 9039dfdb71f07e6d1c0313b7f392e651 543 SUPERFAMILY SSF58104 235 542 8.5E-73 T 14-10-2018 DA442_19835 9039dfdb71f07e6d1c0313b7f392e651 543 Gene3D G3DSA:1.10.287.950 211 543 2.7E-76 T 14-10-2018 DA442_15855 f675768003d7d52ec42440c0987beef0 485 Gene3D G3DSA:3.40.605.10 7 448 1.7E-141 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DA442_15855 f675768003d7d52ec42440c0987beef0 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 242 249 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DA442_15855 f675768003d7d52ec42440c0987beef0 485 Gene3D G3DSA:3.40.309.10 247 436 1.7E-141 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DA442_15855 f675768003d7d52ec42440c0987beef0 485 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DA442_15855 f675768003d7d52ec42440c0987beef0 485 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 1 485 56.367 T 14-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 DA442_15855 f675768003d7d52ec42440c0987beef0 485 SUPERFAMILY SSF53720 2 449 2.36E-124 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DA442_15855 f675768003d7d52ec42440c0987beef0 485 Pfam PF00171 Aldehyde dehydrogenase family 9 458 3.1E-122 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DA442_15855 f675768003d7d52ec42440c0987beef0 485 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 3 484 3.1E-228 T 14-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 DA442_19820 db462816b7fbd865e92b787aa74f078b 507 SMART SM00642 27 417 1.0E-58 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DA442_19820 db462816b7fbd865e92b787aa74f078b 507 Pfam PF00128 Alpha amylase, catalytic domain 56 387 9.5E-21 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DA442_19820 db462816b7fbd865e92b787aa74f078b 507 SUPERFAMILY SSF51011 420 504 2.88E-31 T 14-10-2018 DA442_19820 db462816b7fbd865e92b787aa74f078b 507 Gene3D G3DSA:3.20.20.80 28 392 2.3E-156 T 14-10-2018 DA442_19820 db462816b7fbd865e92b787aa74f078b 507 Gene3D G3DSA:2.40.30.140 127 229 2.3E-156 T 14-10-2018 DA442_19820 db462816b7fbd865e92b787aa74f078b 507 Gene3D G3DSA:2.60.40.1180 423 505 8.1E-27 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta DA442_19820 db462816b7fbd865e92b787aa74f078b 507 SUPERFAMILY SSF51445 28 393 1.38E-94 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DA442_19820 db462816b7fbd865e92b787aa74f078b 507 PIRSF PIRSF001021 2 507 1.7E-228 T 14-10-2018 IPR013776 Alpha-amylase, thermostable GO:0004553|GO:0005509|GO:0005975 KEGG: 00500+3.2.1.1 DA442_10975 b76e1b2d6756d39331de36103ae8050a 188 Pfam PF09285 Elongation factor P, C-terminal 132 187 6.0E-19 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 DA442_10975 b76e1b2d6756d39331de36103ae8050a 188 SUPERFAMILY SSF50104 1 65 5.78E-12 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily DA442_10975 b76e1b2d6756d39331de36103ae8050a 188 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 188 4.6E-90 T 14-10-2018 IPR011897 Translation elongation factor P-like, YeiP DA442_10975 b76e1b2d6756d39331de36103ae8050a 188 SUPERFAMILY SSF50249 132 188 2.06E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_10975 b76e1b2d6756d39331de36103ae8050a 188 PIRSF PIRSF005901 1 188 1.6E-59 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP DA442_10975 b76e1b2d6756d39331de36103ae8050a 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 62 1.3E-17 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like DA442_10975 b76e1b2d6756d39331de36103ae8050a 188 SMART SM00841 132 187 2.7E-25 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 DA442_10975 b76e1b2d6756d39331de36103ae8050a 188 ProSitePatterns PS01275 Elongation factor P signature. 153 172 - T 14-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site DA442_10975 b76e1b2d6756d39331de36103ae8050a 188 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 188 42.306 T 14-10-2018 IPR011897 Translation elongation factor P-like, YeiP DA442_10975 b76e1b2d6756d39331de36103ae8050a 188 Gene3D G3DSA:2.40.50.140 131 188 1.7E-19 T 14-10-2018 DA442_10975 b76e1b2d6756d39331de36103ae8050a 188 SUPERFAMILY SSF50249 67 129 1.84E-11 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_10975 b76e1b2d6756d39331de36103ae8050a 188 SMART SM01185 69 124 4.8E-13 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 DA442_10975 b76e1b2d6756d39331de36103ae8050a 188 Gene3D G3DSA:2.30.30.30 1 65 4.3E-15 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 DA442_10975 b76e1b2d6756d39331de36103ae8050a 188 Gene3D G3DSA:2.40.50.140 67 130 9.9E-15 T 14-10-2018 DA442_10975 b76e1b2d6756d39331de36103ae8050a 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 5.8E-13 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 DA442_08905 22f55d0ff29cd5f3feacb7d446863fc9 586 Gene3D G3DSA:1.10.8.60 455 529 2.0E-10 T 14-10-2018 DA442_08905 22f55d0ff29cd5f3feacb7d446863fc9 586 SUPERFAMILY SSF46689 489 584 1.02E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_08905 22f55d0ff29cd5f3feacb7d446863fc9 586 Pfam PF00158 Sigma-54 interaction domain 285 447 1.1E-60 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DA442_08905 22f55d0ff29cd5f3feacb7d446863fc9 586 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 367 382 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DA442_08905 22f55d0ff29cd5f3feacb7d446863fc9 586 Gene3D G3DSA:1.10.10.60 544 585 6.0E-9 T 14-10-2018 DA442_08905 22f55d0ff29cd5f3feacb7d446863fc9 586 Pfam PF01590 GAF domain 76 186 2.6E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 DA442_08905 22f55d0ff29cd5f3feacb7d446863fc9 586 SMART SM00382 300 444 7.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_08905 22f55d0ff29cd5f3feacb7d446863fc9 586 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 304 317 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DA442_08905 22f55d0ff29cd5f3feacb7d446863fc9 586 Pfam PF02954 Bacterial regulatory protein, Fis family 555 580 1.2E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DA442_08905 22f55d0ff29cd5f3feacb7d446863fc9 586 Gene3D G3DSA:3.40.50.300 265 452 3.8E-56 T 14-10-2018 DA442_08905 22f55d0ff29cd5f3feacb7d446863fc9 586 Gene3D G3DSA:3.30.450.40 4 188 5.5E-45 T 14-10-2018 IPR029016 GAF-like domain superfamily DA442_08905 22f55d0ff29cd5f3feacb7d446863fc9 586 SUPERFAMILY SSF52540 284 511 8.6E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_24665 fc442c05bfced39dc0282cf0b8f74246 123 Gene3D G3DSA:3.10.180.10 12 122 9.1E-18 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DA442_24665 fc442c05bfced39dc0282cf0b8f74246 123 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 116 9.8E-6 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DA442_24665 fc442c05bfced39dc0282cf0b8f74246 123 SUPERFAMILY SSF54593 12 120 5.09E-25 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DA442_00925 bd7c4d42f235f0e573b192630ed4b880 564 Pfam PF06048 Domain of unknown function (DUF927) 17 278 3.9E-64 T 14-10-2018 IPR009270 Domain of unknown function DUF927 DA442_00840 f29b5dfabeb78a109c5292325c04db9d 207 Gene3D G3DSA:3.40.50.300 8 183 1.7E-74 T 14-10-2018 DA442_00840 f29b5dfabeb78a109c5292325c04db9d 207 Gene3D G3DSA:3.30.63.10 37 96 1.7E-74 T 14-10-2018 DA442_00840 f29b5dfabeb78a109c5292325c04db9d 207 Pfam PF00625 Guanylate kinase 5 185 2.6E-63 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit DA442_00840 f29b5dfabeb78a109c5292325c04db9d 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 14-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 DA442_00840 f29b5dfabeb78a109c5292325c04db9d 207 SMART SM00072 3 187 1.3E-77 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit DA442_00840 f29b5dfabeb78a109c5292325c04db9d 207 SUPERFAMILY SSF52540 3 189 1.86E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_00840 f29b5dfabeb78a109c5292325c04db9d 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 1.8E-76 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 DA442_00840 f29b5dfabeb78a109c5292325c04db9d 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 38.259 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 DA442_01975 20e36686f727a92b52426cfddc2a9fef 582 Gene3D G3DSA:3.40.630.30 312 458 7.4E-8 T 14-10-2018 DA442_01975 20e36686f727a92b52426cfddc2a9fef 582 SMART SM00563 75 199 3.3E-4 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DA442_01975 20e36686f727a92b52426cfddc2a9fef 582 Pfam PF13444 Acetyltransferase (GNAT) domain 330 429 1.2E-21 T 14-10-2018 DA442_01975 20e36686f727a92b52426cfddc2a9fef 582 SUPERFAMILY SSF69593 46 248 7.32E-9 T 14-10-2018 DA442_01975 20e36686f727a92b52426cfddc2a9fef 582 SUPERFAMILY SSF55729 313 459 2.54E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_07800 6d482b7350c69db5666c9aa8dc303cdd 815 SMART SM00926 50 110 2.4E-12 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DA442_07800 6d482b7350c69db5666c9aa8dc303cdd 815 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 50 110 2.4E-16 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DA442_07800 6d482b7350c69db5666c9aa8dc303cdd 815 SUPERFAMILY SSF53706 51 692 8.9E-175 T 14-10-2018 DA442_07800 6d482b7350c69db5666c9aa8dc303cdd 815 Pfam PF01568 Molydopterin dinucleotide binding domain 690 801 3.3E-24 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 DA442_07800 6d482b7350c69db5666c9aa8dc303cdd 815 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 9 808 0.0 T 14-10-2018 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 DA442_07800 6d482b7350c69db5666c9aa8dc303cdd 815 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 726 753 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 DA442_07800 6d482b7350c69db5666c9aa8dc303cdd 815 Gene3D G3DSA:2.40.40.20 665 812 4.2E-39 T 14-10-2018 DA442_07800 6d482b7350c69db5666c9aa8dc303cdd 815 Gene3D G3DSA:3.40.228.10 341 413 1.6E-17 T 14-10-2018 DA442_07800 6d482b7350c69db5666c9aa8dc303cdd 815 Pfam PF00384 Molybdopterin oxidoreductase 113 570 3.9E-98 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DA442_07800 6d482b7350c69db5666c9aa8dc303cdd 815 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 511 528 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 DA442_07800 6d482b7350c69db5666c9aa8dc303cdd 815 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 55 73 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 DA442_07800 6d482b7350c69db5666c9aa8dc303cdd 815 Gene3D G3DSA:3.40.50.740 49 322 3.6E-81 T 14-10-2018 DA442_07800 6d482b7350c69db5666c9aa8dc303cdd 815 Gene3D G3DSA:3.40.50.740 414 621 8.5E-52 T 14-10-2018 DA442_07800 6d482b7350c69db5666c9aa8dc303cdd 815 SUPERFAMILY SSF50692 636 806 6.22E-35 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily DA442_08305 b77d5888994456140a635b5a28a71c68 124 Gene3D G3DSA:3.30.1150.10 32 115 3.9E-5 T 14-10-2018 DA442_03530 404066f0bb7e974bf8325b596a26efac 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 15.199 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DA442_03530 404066f0bb7e974bf8325b596a26efac 80 Gene3D G3DSA:1.10.287.1040 4 80 1.6E-22 T 14-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 DA442_03530 404066f0bb7e974bf8325b596a26efac 80 Pfam PF02609 Exonuclease VII small subunit 11 61 4.4E-18 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DA442_03530 404066f0bb7e974bf8325b596a26efac 80 PIRSF PIRSF006488 1 80 9.0E-21 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DA442_03530 404066f0bb7e974bf8325b596a26efac 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 50 6.0E-22 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DA442_03530 404066f0bb7e974bf8325b596a26efac 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 65 1.2E-20 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DA442_03530 404066f0bb7e974bf8325b596a26efac 80 SUPERFAMILY SSF116842 2 72 9.29E-21 T 14-10-2018 DA442_24285 b9f5adce9269d044912428b9fcc94213 1372 SUPERFAMILY SSF55486 490 660 4.27E-9 T 14-10-2018 DA442_24285 b9f5adce9269d044912428b9fcc94213 1372 SUPERFAMILY SSF55486 300 665 1.1E-17 T 14-10-2018 DA442_24285 b9f5adce9269d044912428b9fcc94213 1372 Gene3D G3DSA:3.40.390.10 565 661 2.8E-8 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 DA442_24285 b9f5adce9269d044912428b9fcc94213 1372 Pfam PF10462 Peptidase M66 584 623 7.8E-6 T 14-10-2018 IPR019503 Peptidase M66 domain GO:0004222 DA442_08205 05c0b1848381138747f13830cefe2e5c 377 SUPERFAMILY SSF50331 250 372 6.23E-9 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DA442_08205 05c0b1848381138747f13830cefe2e5c 377 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_08205 05c0b1848381138747f13830cefe2e5c 377 SMART SM00382 42 225 4.6E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_08205 05c0b1848381138747f13830cefe2e5c 377 Pfam PF08402 TOBE domain 292 371 2.7E-12 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 DA442_08205 05c0b1848381138747f13830cefe2e5c 377 SUPERFAMILY SSF52540 18 257 5.32E-88 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_08205 05c0b1848381138747f13830cefe2e5c 377 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 48 371 3.7E-156 T 14-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 DA442_08205 05c0b1848381138747f13830cefe2e5c 377 Gene3D G3DSA:2.40.50.140 299 319 7.3E-12 T 14-10-2018 DA442_08205 05c0b1848381138747f13830cefe2e5c 377 Gene3D G3DSA:2.40.50.940 236 298 7.3E-12 T 14-10-2018 DA442_08205 05c0b1848381138747f13830cefe2e5c 377 Pfam PF00005 ABC transporter 35 174 3.2E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_08205 05c0b1848381138747f13830cefe2e5c 377 Gene3D G3DSA:3.40.50.300 17 235 7.8E-69 T 14-10-2018 DA442_06725 3737f21d16c719edae3fdab4cb121692 365 SUPERFAMILY SSF81345 41 360 7.98E-79 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DA442_06725 3737f21d16c719edae3fdab4cb121692 365 Pfam PF01032 FecCD transport family 59 360 3.8E-80 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DA442_06725 3737f21d16c719edae3fdab4cb121692 365 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 37 363 30.838 T 14-10-2018 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 DA442_06725 3737f21d16c719edae3fdab4cb121692 365 Gene3D G3DSA:1.10.3470.10 39 362 1.5E-93 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DA442_22600 b64c32753fc9f7cf65450e538ec0e6e7 398 SUPERFAMILY SSF81901 78 281 3.23E-26 T 14-10-2018 DA442_22600 b64c32753fc9f7cf65450e538ec0e6e7 398 Pfam PF08238 Sel1 repeat 79 97 0.037 T 14-10-2018 IPR006597 Sel1-like repeat DA442_22600 b64c32753fc9f7cf65450e538ec0e6e7 398 Pfam PF08238 Sel1 repeat 191 206 11.0 T 14-10-2018 IPR006597 Sel1-like repeat DA442_22600 b64c32753fc9f7cf65450e538ec0e6e7 398 Pfam PF08238 Sel1 repeat 147 169 3.4 T 14-10-2018 IPR006597 Sel1-like repeat DA442_22600 b64c32753fc9f7cf65450e538ec0e6e7 398 Pfam PF08238 Sel1 repeat 212 242 6.2E-5 T 14-10-2018 IPR006597 Sel1-like repeat DA442_22600 b64c32753fc9f7cf65450e538ec0e6e7 398 SMART SM00671 207 242 0.001 T 14-10-2018 IPR006597 Sel1-like repeat DA442_22600 b64c32753fc9f7cf65450e538ec0e6e7 398 SMART SM00671 171 206 14.0 T 14-10-2018 IPR006597 Sel1-like repeat DA442_22600 b64c32753fc9f7cf65450e538ec0e6e7 398 SMART SM00671 243 276 120.0 T 14-10-2018 IPR006597 Sel1-like repeat DA442_22600 b64c32753fc9f7cf65450e538ec0e6e7 398 SMART SM00671 135 170 11.0 T 14-10-2018 IPR006597 Sel1-like repeat DA442_22600 b64c32753fc9f7cf65450e538ec0e6e7 398 SMART SM00671 67 97 310.0 T 14-10-2018 IPR006597 Sel1-like repeat DA442_22600 b64c32753fc9f7cf65450e538ec0e6e7 398 Gene3D G3DSA:1.25.40.10 187 304 3.0E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_22600 b64c32753fc9f7cf65450e538ec0e6e7 398 Gene3D G3DSA:1.25.40.10 22 186 4.4E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_07995 a7ea446d1a53dff60f9a8f37c881439d 672 SUPERFAMILY SSF58104 360 668 6.02E-61 T 14-10-2018 DA442_07995 a7ea446d1a53dff60f9a8f37c881439d 672 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 475 633 2.1E-38 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_07995 a7ea446d1a53dff60f9a8f37c881439d 672 SMART SM00283 405 667 2.1E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_07995 a7ea446d1a53dff60f9a8f37c881439d 672 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 314 334 4.4E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DA442_07995 a7ea446d1a53dff60f9a8f37c881439d 672 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 504 531 4.4E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DA442_07995 a7ea446d1a53dff60f9a8f37c881439d 672 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 533 562 4.4E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DA442_07995 a7ea446d1a53dff60f9a8f37c881439d 672 Gene3D G3DSA:1.10.287.950 339 669 1.1E-60 T 14-10-2018 DA442_17305 fe3e8beaec55e869dddaeb1d97e72eb2 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 68 103 1.1E-16 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 DA442_17305 fe3e8beaec55e869dddaeb1d97e72eb2 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 115 152 2.4E-16 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 DA442_17305 fe3e8beaec55e869dddaeb1d97e72eb2 189 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 21 56 1.9E-14 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 DA442_17305 fe3e8beaec55e869dddaeb1d97e72eb2 189 Gene3D G3DSA:3.30.65.10 62 108 8.0E-9 T 14-10-2018 DA442_17305 fe3e8beaec55e869dddaeb1d97e72eb2 189 Gene3D G3DSA:3.30.65.10 11 61 9.4E-9 T 14-10-2018 DA442_17305 fe3e8beaec55e869dddaeb1d97e72eb2 189 SUPERFAMILY SSF57783 66 110 7.23E-15 T 14-10-2018 DA442_17305 fe3e8beaec55e869dddaeb1d97e72eb2 189 SUPERFAMILY SSF57783 106 147 4.42E-5 T 14-10-2018 DA442_17305 fe3e8beaec55e869dddaeb1d97e72eb2 189 SUPERFAMILY SSF57783 17 64 3.83E-14 T 14-10-2018 DA442_03670 4a5a1f9232f9b35bed621ca0806203c2 321 Pfam PF04055 Radical SAM superfamily 91 251 3.5E-18 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DA442_03670 4a5a1f9232f9b35bed621ca0806203c2 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 155.548 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DA442_03670 4a5a1f9232f9b35bed621ca0806203c2 321 PIRSF PIRSF005963 1 321 1.1E-128 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DA442_03670 4a5a1f9232f9b35bed621ca0806203c2 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 25 73 7.1E-8 T 14-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DA442_03670 4a5a1f9232f9b35bed621ca0806203c2 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 319 1.8E-149 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DA442_03670 4a5a1f9232f9b35bed621ca0806203c2 321 SUPERFAMILY SSF102114 52 315 5.62E-68 T 14-10-2018 DA442_03670 4a5a1f9232f9b35bed621ca0806203c2 321 Gene3D G3DSA:3.20.20.70 49 293 1.7E-22 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_03670 4a5a1f9232f9b35bed621ca0806203c2 321 SMART SM00729 84 293 2.5E-19 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DA442_02480 57145a5a0a9385306df229e8e5aa50d5 489 Gene3D G3DSA:3.40.50.720 144 251 1.0E-16 T 14-10-2018 DA442_02480 57145a5a0a9385306df229e8e5aa50d5 489 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 146 459 1.3E-26 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DA442_02480 57145a5a0a9385306df229e8e5aa50d5 489 SUPERFAMILY SSF46548 2 155 2.04E-36 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DA442_02480 57145a5a0a9385306df229e8e5aa50d5 489 SUPERFAMILY SSF51971 143 407 9.42E-67 T 14-10-2018 DA442_02480 57145a5a0a9385306df229e8e5aa50d5 489 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 38 131 3.2E-24 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 DA442_02480 57145a5a0a9385306df229e8e5aa50d5 489 PRINTS PR00419 Adrenodoxin reductase family signature 146 168 3.8E-23 T 14-10-2018 DA442_02480 57145a5a0a9385306df229e8e5aa50d5 489 PRINTS PR00419 Adrenodoxin reductase family signature 211 221 3.8E-23 T 14-10-2018 DA442_02480 57145a5a0a9385306df229e8e5aa50d5 489 PRINTS PR00419 Adrenodoxin reductase family signature 169 182 3.8E-23 T 14-10-2018 DA442_02480 57145a5a0a9385306df229e8e5aa50d5 489 PRINTS PR00419 Adrenodoxin reductase family signature 286 300 3.8E-23 T 14-10-2018 DA442_02480 57145a5a0a9385306df229e8e5aa50d5 489 Gene3D G3DSA:3.50.50.60 252 406 1.0E-37 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_02480 57145a5a0a9385306df229e8e5aa50d5 489 Gene3D G3DSA:1.10.1060.10 10 143 4.4E-24 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DA442_02480 57145a5a0a9385306df229e8e5aa50d5 489 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 478 5.3E-198 T 14-10-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 DA442_20395 d3e4dd37b25e7cdfa3d4a3356c9a5cd9 142 SUPERFAMILY SSF46458 4 131 8.66E-27 T 14-10-2018 IPR009050 Globin-like superfamily DA442_20395 d3e4dd37b25e7cdfa3d4a3356c9a5cd9 142 Gene3D G3DSA:1.10.490.10 1 132 1.7E-30 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 DA442_15970 3c774d23cb0a3d01960469282ba87633 310 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 8 301 30.082 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 DA442_15970 3c774d23cb0a3d01960469282ba87633 310 Gene3D G3DSA:1.10.20.140 115 186 2.8E-108 T 14-10-2018 DA442_15970 3c774d23cb0a3d01960469282ba87633 310 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 9 294 2.4E-115 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 DA442_15970 3c774d23cb0a3d01960469282ba87633 310 Pfam PF01715 IPP transferase 42 287 3.6E-86 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 DA442_15970 3c774d23cb0a3d01960469282ba87633 310 Gene3D G3DSA:3.40.50.300 12 292 2.8E-108 T 14-10-2018 DA442_15970 3c774d23cb0a3d01960469282ba87633 310 SUPERFAMILY SSF52540 10 152 8.5E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_14545 2b17c497f3976e99250fe3690daf6af2 320 Hamap MF_00367 GTPase Era [era]. 24 316 35.748 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_14545 2b17c497f3976e99250fe3690daf6af2 320 TIGRFAM TIGR00436 era: GTP-binding protein Era 27 299 4.8E-110 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_14545 2b17c497f3976e99250fe3690daf6af2 320 Gene3D G3DSA:3.30.300.20 204 318 2.0E-42 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta DA442_14545 2b17c497f3976e99250fe3690daf6af2 320 Pfam PF07650 KH domain 227 304 4.3E-21 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_14545 2b17c497f3976e99250fe3690daf6af2 320 Gene3D G3DSA:3.40.50.300 20 202 1.0E-51 T 14-10-2018 DA442_14545 2b17c497f3976e99250fe3690daf6af2 320 SUPERFAMILY SSF54814 200 316 2.35E-41 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 DA442_14545 2b17c497f3976e99250fe3690daf6af2 320 Pfam PF01926 50S ribosome-binding GTPase 29 143 2.8E-23 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DA442_14545 2b17c497f3976e99250fe3690daf6af2 320 SUPERFAMILY SSF52540 29 224 6.28E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_14545 2b17c497f3976e99250fe3690daf6af2 320 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 26 188 9.0E-39 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DA442_20990 28ca6670ce3e3470b22fbf608f354180 154 SUPERFAMILY SSF46785 13 148 1.45E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_20990 28ca6670ce3e3470b22fbf608f354180 154 Gene3D G3DSA:1.10.10.10 13 150 3.0E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_20990 28ca6670ce3e3470b22fbf608f354180 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 124 144 2.6E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DA442_20990 28ca6670ce3e3470b22fbf608f354180 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 94 110 2.6E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DA442_20990 28ca6670ce3e3470b22fbf608f354180 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 58 74 2.6E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DA442_20990 28ca6670ce3e3470b22fbf608f354180 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 90 2.6E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DA442_20990 28ca6670ce3e3470b22fbf608f354180 154 SMART SM00347 33 134 4.6E-24 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DA442_20990 28ca6670ce3e3470b22fbf608f354180 154 ProSitePatterns PS01117 MarR-type HTH domain signature. 73 107 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site DA442_20990 28ca6670ce3e3470b22fbf608f354180 154 Pfam PF01047 MarR family 40 98 2.6E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DA442_18590 d2d693e47ce1f687e34fe24796a85c2f 543 Pfam PF14559 Tetratricopeptide repeat 177 237 8.5E-7 T 14-10-2018 DA442_18590 d2d693e47ce1f687e34fe24796a85c2f 543 Gene3D G3DSA:3.40.50.2300 7 141 3.6E-20 T 14-10-2018 DA442_18590 d2d693e47ce1f687e34fe24796a85c2f 543 Pfam PF00072 Response regulator receiver domain 10 119 2.1E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_18590 d2d693e47ce1f687e34fe24796a85c2f 543 SUPERFAMILY SSF48452 145 298 3.57E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_18590 d2d693e47ce1f687e34fe24796a85c2f 543 SUPERFAMILY SSF52172 9 139 1.31E-22 T 14-10-2018 IPR011006 CheY-like superfamily DA442_18590 d2d693e47ce1f687e34fe24796a85c2f 543 Gene3D G3DSA:1.25.40.10 142 303 1.7E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_18590 d2d693e47ce1f687e34fe24796a85c2f 543 SMART SM00448 8 124 1.4E-13 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_18590 d2d693e47ce1f687e34fe24796a85c2f 543 PIRSF PIRSF011521 1 543 6.0E-272 T 14-10-2018 IPR014460 Signal transduction response regulator, predicted, VieB DA442_21875 ad1647ded277fb17b0dab8c30d5accad 166 Gene3D G3DSA:3.40.630.30 1 164 2.8E-42 T 14-10-2018 DA442_21875 ad1647ded277fb17b0dab8c30d5accad 166 Pfam PF00583 Acetyltransferase (GNAT) family 39 136 3.4E-17 T 14-10-2018 IPR000182 GNAT domain DA442_21875 ad1647ded277fb17b0dab8c30d5accad 166 SUPERFAMILY SSF55729 3 161 7.03E-38 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_06240 089d5a1c028ce473885c8c4a273b9285 400 Gene3D G3DSA:1.20.1720.10 17 396 1.4E-100 T 14-10-2018 DA442_06240 089d5a1c028ce473885c8c4a273b9285 400 SUPERFAMILY SSF103473 8 398 4.71E-64 T 14-10-2018 IPR036259 MFS transporter superfamily DA442_06240 089d5a1c028ce473885c8c4a273b9285 400 Pfam PF07690 Major Facilitator Superfamily 24 364 5.7E-50 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DA442_06240 089d5a1c028ce473885c8c4a273b9285 400 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 13 395 4.1E-120 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 DA442_11470 ffba62267b51324021382fe43130d898 255 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 125 135 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 DA442_11470 ffba62267b51324021382fe43130d898 255 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 DA442_11470 ffba62267b51324021382fe43130d898 255 PIRSF PIRSF005902 1 255 1.6E-83 T 14-10-2018 IPR001130 TatD family GO:0016788 DA442_11470 ffba62267b51324021382fe43130d898 255 Pfam PF01026 TatD related DNase 3 253 1.1E-79 T 14-10-2018 IPR001130 TatD family GO:0016788 DA442_11470 ffba62267b51324021382fe43130d898 255 SUPERFAMILY SSF51556 1 253 1.81E-87 T 14-10-2018 IPR032466 Metal-dependent hydrolase DA442_11470 ffba62267b51324021382fe43130d898 255 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 253 1.6E-94 T 14-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 DA442_11470 ffba62267b51324021382fe43130d898 255 Gene3D G3DSA:3.20.20.140 1 255 1.8E-100 T 14-10-2018 DA442_11470 ffba62267b51324021382fe43130d898 255 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 DA442_21945 46f943fa0181a9c29395df996307e38e 365 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 212 246 - T 14-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 DA442_21945 46f943fa0181a9c29395df996307e38e 365 Pfam PF00924 Mechanosensitive ion channel 139 342 1.8E-55 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 DA442_21945 46f943fa0181a9c29395df996307e38e 365 Gene3D G3DSA:3.30.70.100 249 346 8.9E-14 T 14-10-2018 DA442_21945 46f943fa0181a9c29395df996307e38e 365 Gene3D G3DSA:2.30.30.60 196 248 3.1E-10 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily DA442_21945 46f943fa0181a9c29395df996307e38e 365 SUPERFAMILY SSF82861 97 179 7.45E-14 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 DA442_21945 46f943fa0181a9c29395df996307e38e 365 SUPERFAMILY SSF50182 180 247 6.54E-18 T 14-10-2018 IPR010920 LSM domain superfamily DA442_21945 46f943fa0181a9c29395df996307e38e 365 SUPERFAMILY SSF82689 252 351 1.18E-18 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 DA442_16760 970f31dc1953091b171244b1201e7f08 206 Pfam PF00717 Peptidase S24-like 118 183 1.8E-15 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C DA442_16760 970f31dc1953091b171244b1201e7f08 206 SUPERFAMILY SSF51306 79 202 3.49E-36 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily DA442_16760 970f31dc1953091b171244b1201e7f08 206 Hamap MF_00015 LexA repressor [lexA]. 3 203 31.634 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 DA442_16760 970f31dc1953091b171244b1201e7f08 206 TIGRFAM TIGR00498 lexA: repressor LexA 1 203 5.6E-81 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 DA442_16760 970f31dc1953091b171244b1201e7f08 206 Gene3D G3DSA:2.10.109.10 84 206 6.6E-44 T 14-10-2018 DA442_16760 970f31dc1953091b171244b1201e7f08 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 115 125 1.5E-13 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 DA442_16760 970f31dc1953091b171244b1201e7f08 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 154 166 1.5E-13 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 DA442_16760 970f31dc1953091b171244b1201e7f08 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 126 137 1.5E-13 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 DA442_16760 970f31dc1953091b171244b1201e7f08 206 Gene3D G3DSA:1.10.10.10 1 69 1.2E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_16760 970f31dc1953091b171244b1201e7f08 206 Pfam PF01726 LexA DNA binding domain 1 65 4.4E-29 T 14-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 DA442_16760 970f31dc1953091b171244b1201e7f08 206 SUPERFAMILY SSF46785 3 69 3.14E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_22975 0bc78218af908c154fbdfaca0ebc5a45 183 Pfam PF10688 Bacterial inner membrane protein 4 160 6.1E-53 T 14-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV DA442_22975 0bc78218af908c154fbdfaca0ebc5a45 183 PIRSF PIRSF011443 1 178 6.1E-46 T 14-10-2018 IPR026267 Inner membrane protein YgjV DA442_02210 148d753c6b6904ac9f8c62fa52fd45d0 194 SUPERFAMILY SSF53474 5 192 6.63E-22 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_02210 148d753c6b6904ac9f8c62fa52fd45d0 194 Gene3D G3DSA:3.40.50.1820 6 194 1.1E-62 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_02210 148d753c6b6904ac9f8c62fa52fd45d0 194 Pfam PF05728 Uncharacterised protein family (UPF0227) 7 192 3.1E-70 T 14-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA DA442_22320 56cb909fbf2fa1f97007de86dc5fea5a 296 SUPERFAMILY SSF111369 42 242 1.31E-21 T 14-10-2018 DA442_22320 56cb909fbf2fa1f97007de86dc5fea5a 296 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 233 2.2E-28 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DA442_22320 56cb909fbf2fa1f97007de86dc5fea5a 296 Gene3D G3DSA:2.40.50.100 42 101 5.1E-13 T 14-10-2018 DA442_22320 56cb909fbf2fa1f97007de86dc5fea5a 296 Gene3D G3DSA:2.40.30.170 170 295 1.5E-27 T 14-10-2018 DA442_22320 56cb909fbf2fa1f97007de86dc5fea5a 296 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 42 235 2.8E-17 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DA442_04960 93e37dca6af4505ff66c89e1b001140b 364 Gene3D G3DSA:3.40.50.1100 25 324 9.4E-69 T 14-10-2018 DA442_04960 93e37dca6af4505ff66c89e1b001140b 364 SUPERFAMILY SSF53686 23 336 1.83E-71 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DA442_04960 93e37dca6af4505ff66c89e1b001140b 364 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 31 316 3.4E-42 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DA442_04960 93e37dca6af4505ff66c89e1b001140b 364 Gene3D G3DSA:3.40.50.1100 51 157 9.4E-69 T 14-10-2018 DA442_14445 ea8baebc501f2024e8ab4b4aa8d6610d 853 Gene3D G3DSA:3.30.420.110 127 261 6.8E-37 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 DA442_14445 ea8baebc501f2024e8ab4b4aa8d6610d 853 PIRSF PIRSF037677 189 831 1.1E-130 T 14-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 DA442_14445 ea8baebc501f2024e8ab4b4aa8d6610d 853 PIRSF PIRSF037677 1 181 9.8E-27 T 14-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 DA442_14445 ea8baebc501f2024e8ab4b4aa8d6610d 853 Gene3D G3DSA:3.40.1170.10 1 121 6.7E-52 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 DA442_14445 ea8baebc501f2024e8ab4b4aa8d6610d 853 Gene3D G3DSA:3.40.50.300 567 851 2.0E-100 T 14-10-2018 DA442_14445 ea8baebc501f2024e8ab4b4aa8d6610d 853 Pfam PF00488 MutS domain V 609 796 9.0E-87 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 DA442_14445 ea8baebc501f2024e8ab4b4aa8d6610d 853 SUPERFAMILY SSF53150 114 266 2.75E-41 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 DA442_14445 ea8baebc501f2024e8ab4b4aa8d6610d 853 SUPERFAMILY SSF52540 566 797 2.0E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_14445 ea8baebc501f2024e8ab4b4aa8d6610d 853 Pfam PF01624 MutS domain I 8 119 3.6E-41 T 14-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 DA442_14445 ea8baebc501f2024e8ab4b4aa8d6610d 853 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 7 845 25.237 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 DA442_14445 ea8baebc501f2024e8ab4b4aa8d6610d 853 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 687 703 - T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 DA442_14445 ea8baebc501f2024e8ab4b4aa8d6610d 853 SMART SM00534 606 793 3.5E-118 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 DA442_14445 ea8baebc501f2024e8ab4b4aa8d6610d 853 Pfam PF05190 MutS family domain IV 427 517 7.4E-31 T 14-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 DA442_14445 ea8baebc501f2024e8ab4b4aa8d6610d 853 Gene3D G3DSA:1.10.1420.10 386 502 8.7E-105 T 14-10-2018 DA442_14445 ea8baebc501f2024e8ab4b4aa8d6610d 853 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 7 851 0.0 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 DA442_14445 ea8baebc501f2024e8ab4b4aa8d6610d 853 Pfam PF05188 MutS domain II 128 253 1.5E-30 T 14-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 DA442_14445 ea8baebc501f2024e8ab4b4aa8d6610d 853 SUPERFAMILY SSF55271 4 113 7.85E-42 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 DA442_14445 ea8baebc501f2024e8ab4b4aa8d6610d 853 SMART SM00533 283 590 2.1E-109 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 DA442_14445 ea8baebc501f2024e8ab4b4aa8d6610d 853 Pfam PF05192 MutS domain III 269 558 1.4E-40 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 DA442_14445 ea8baebc501f2024e8ab4b4aa8d6610d 853 Gene3D G3DSA:1.10.1420.10 266 558 8.7E-105 T 14-10-2018 DA442_14445 ea8baebc501f2024e8ab4b4aa8d6610d 853 SUPERFAMILY SSF48334 267 564 7.46E-93 T 14-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily DA442_18985 4dda1cbf553c636b63296bfa543e203e 244 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_18985 4dda1cbf553c636b63296bfa543e203e 244 Pfam PF00005 ABC transporter 23 167 5.1E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_18985 4dda1cbf553c636b63296bfa543e203e 244 SUPERFAMILY SSF52540 7 237 5.21E-78 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_18985 4dda1cbf553c636b63296bfa543e203e 244 Gene3D G3DSA:3.40.50.300 5 244 1.4E-77 T 14-10-2018 DA442_18985 4dda1cbf553c636b63296bfa543e203e 244 PIRSF PIRSF039085 4 243 1.8E-102 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 DA442_18985 4dda1cbf553c636b63296bfa543e203e 244 SMART SM00382 32 215 4.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_16175 6d696284a0ca4b8121ee1d4f5fed6a44 340 PIRSF PIRSF004911 3 340 3.7E-119 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase DA442_16175 6d696284a0ca4b8121ee1d4f5fed6a44 340 SUPERFAMILY SSF102114 102 323 1.83E-29 T 14-10-2018 DA442_16175 6d696284a0ca4b8121ee1d4f5fed6a44 340 Pfam PF13353 4Fe-4S single cluster domain 114 183 1.8E-7 T 14-10-2018 DA442_16175 6d696284a0ca4b8121ee1d4f5fed6a44 340 Gene3D G3DSA:3.20.20.70 51 334 1.6E-94 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_16175 6d696284a0ca4b8121ee1d4f5fed6a44 340 Pfam PF04055 Radical SAM superfamily 117 263 3.0E-10 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DA442_16175 6d696284a0ca4b8121ee1d4f5fed6a44 340 TIGRFAM TIGR00238 TIGR00238: KamA family protein 13 328 3.1E-131 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase DA442_16175 6d696284a0ca4b8121ee1d4f5fed6a44 340 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 16 335 9.8E-160 T 14-10-2018 IPR022462 Lysine-2,3-aminomutase-like DA442_01850 f454014ae19f6adad68f3b2c8cdabf9f 471 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 DA442_01850 f454014ae19f6adad68f3b2c8cdabf9f 471 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 465 7.9E-267 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 DA442_01850 f454014ae19f6adad68f3b2c8cdabf9f 471 SUPERFAMILY SSF53732 1 466 9.16E-166 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 DA442_01850 f454014ae19f6adad68f3b2c8cdabf9f 471 Pfam PF00330 Aconitase family (aconitate hydratase) 7 457 1.4E-160 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DA442_01850 f454014ae19f6adad68f3b2c8cdabf9f 471 PRINTS PR00415 Aconitase family signature 82 95 9.7E-51 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DA442_01850 f454014ae19f6adad68f3b2c8cdabf9f 471 PRINTS PR00415 Aconitase family signature 108 116 9.7E-51 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DA442_01850 f454014ae19f6adad68f3b2c8cdabf9f 471 PRINTS PR00415 Aconitase family signature 286 300 9.7E-51 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DA442_01850 f454014ae19f6adad68f3b2c8cdabf9f 471 PRINTS PR00415 Aconitase family signature 195 208 9.7E-51 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DA442_01850 f454014ae19f6adad68f3b2c8cdabf9f 471 PRINTS PR00415 Aconitase family signature 209 222 9.7E-51 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DA442_01850 f454014ae19f6adad68f3b2c8cdabf9f 471 PRINTS PR00415 Aconitase family signature 133 148 9.7E-51 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DA442_01850 f454014ae19f6adad68f3b2c8cdabf9f 471 PRINTS PR00415 Aconitase family signature 399 412 9.7E-51 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DA442_01850 f454014ae19f6adad68f3b2c8cdabf9f 471 PRINTS PR00415 Aconitase family signature 343 354 9.7E-51 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DA442_01850 f454014ae19f6adad68f3b2c8cdabf9f 471 PRINTS PR00415 Aconitase family signature 119 132 9.7E-51 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DA442_01850 f454014ae19f6adad68f3b2c8cdabf9f 471 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 DA442_01850 f454014ae19f6adad68f3b2c8cdabf9f 471 Gene3D G3DSA:3.30.499.20 4 286 3.6E-100 T 14-10-2018 DA442_01850 f454014ae19f6adad68f3b2c8cdabf9f 471 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 466 60.916 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 DA442_01850 f454014ae19f6adad68f3b2c8cdabf9f 471 Gene3D G3DSA:3.30.499.10 328 471 4.9E-49 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 DA442_02760 5f526002660abc8c743e3671511dfe27 562 Gene3D G3DSA:3.30.450.40 226 352 1.9E-7 T 14-10-2018 IPR029016 GAF-like domain superfamily DA442_02760 5f526002660abc8c743e3671511dfe27 562 Gene3D G3DSA:3.30.565.10 419 556 8.1E-13 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_02760 5f526002660abc8c743e3671511dfe27 562 SUPERFAMILY SSF55781 227 351 4.49E-7 T 14-10-2018 DA442_02760 5f526002660abc8c743e3671511dfe27 562 Pfam PF06580 Histidine kinase 366 444 1.6E-26 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 DA442_02760 5f526002660abc8c743e3671511dfe27 562 Pfam PF07694 5TMR of 5TMR-LYT 26 194 2.9E-59 T 14-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 DA442_02760 5f526002660abc8c743e3671511dfe27 562 SUPERFAMILY SSF55874 428 524 3.01E-11 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_24575 10adc5162e0ed962f3c24328358a0094 223 PRINTS PR01008 Flagellar L-ring protein signature 68 80 3.3E-22 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 DA442_24575 10adc5162e0ed962f3c24328358a0094 223 PRINTS PR01008 Flagellar L-ring protein signature 183 197 3.3E-22 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 DA442_24575 10adc5162e0ed962f3c24328358a0094 223 PRINTS PR01008 Flagellar L-ring protein signature 199 213 3.3E-22 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 DA442_24575 10adc5162e0ed962f3c24328358a0094 223 PRINTS PR01008 Flagellar L-ring protein signature 162 178 3.3E-22 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 DA442_24575 10adc5162e0ed962f3c24328358a0094 223 PRINTS PR01008 Flagellar L-ring protein signature 136 151 3.3E-22 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 DA442_24575 10adc5162e0ed962f3c24328358a0094 223 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 220 25.601 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 DA442_24575 10adc5162e0ed962f3c24328358a0094 223 Pfam PF02107 Flagellar L-ring protein 47 220 1.9E-60 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 DA442_02140 c2a0668cceb680e1bfba518080a86d44 539 SMART SM00382 42 195 1.7E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_02140 c2a0668cceb680e1bfba518080a86d44 539 SUPERFAMILY SSF52540 6 264 1.32E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_02140 c2a0668cceb680e1bfba518080a86d44 539 Pfam PF13401 AAA domain 42 171 5.8E-23 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_02140 c2a0668cceb680e1bfba518080a86d44 539 SUPERFAMILY SSF47090 453 527 3.92E-12 T 14-10-2018 IPR036365 PGBD-like superfamily DA442_02140 c2a0668cceb680e1bfba518080a86d44 539 Gene3D G3DSA:3.40.50.300 25 184 5.7E-14 T 14-10-2018 DA442_02140 c2a0668cceb680e1bfba518080a86d44 539 Pfam PF01471 Putative peptidoglycan binding domain 465 520 3.1E-7 T 14-10-2018 IPR002477 Peptidoglycan binding-like DA442_02140 c2a0668cceb680e1bfba518080a86d44 539 Gene3D G3DSA:3.90.70.10 342 457 1.9E-33 T 14-10-2018 DA442_02140 c2a0668cceb680e1bfba518080a86d44 539 Gene3D G3DSA:1.10.101.10 458 525 2.6E-22 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 DA442_00640 15b36d077213599a5dc5f9398898f6dd 609 SUPERFAMILY SSF54980 402 516 2.83E-26 T 14-10-2018 IPR035647 EF-G domain III/V-like DA442_00640 15b36d077213599a5dc5f9398898f6dd 609 Gene3D G3DSA:3.40.50.300 5 202 2.1E-68 T 14-10-2018 DA442_00640 15b36d077213599a5dc5f9398898f6dd 609 Gene3D G3DSA:3.30.70.870 310 594 1.5E-129 T 14-10-2018 DA442_00640 15b36d077213599a5dc5f9398898f6dd 609 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_00640 15b36d077213599a5dc5f9398898f6dd 609 PRINTS PR00315 GTP-binding elongation factor signature 91 102 1.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_00640 15b36d077213599a5dc5f9398898f6dd 609 PRINTS PR00315 GTP-binding elongation factor signature 11 24 1.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_00640 15b36d077213599a5dc5f9398898f6dd 609 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_00640 15b36d077213599a5dc5f9398898f6dd 609 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_00640 15b36d077213599a5dc5f9398898f6dd 609 Gene3D G3DSA:3.30.70.240 393 486 1.5E-129 T 14-10-2018 DA442_00640 15b36d077213599a5dc5f9398898f6dd 609 Gene3D G3DSA:2.40.50.250 487 603 1.5E-129 T 14-10-2018 DA442_00640 15b36d077213599a5dc5f9398898f6dd 609 SUPERFAMILY SSF52540 5 211 2.18E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_00640 15b36d077213599a5dc5f9398898f6dd 609 SUPERFAMILY SSF50447 155 303 4.16E-33 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DA442_00640 15b36d077213599a5dc5f9398898f6dd 609 SUPERFAMILY SSF54980 306 391 5.4E-16 T 14-10-2018 IPR035647 EF-G domain III/V-like DA442_00640 15b36d077213599a5dc5f9398898f6dd 609 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 155 3.0E-24 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DA442_00640 15b36d077213599a5dc5f9398898f6dd 609 Gene3D G3DSA:2.40.30.10 203 303 1.2E-33 T 14-10-2018 DA442_00640 15b36d077213599a5dc5f9398898f6dd 609 Pfam PF03144 Elongation factor Tu domain 2 223 293 3.4E-9 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DA442_00640 15b36d077213599a5dc5f9398898f6dd 609 Pfam PF00679 Elongation factor G C-terminus 399 480 1.5E-21 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like DA442_00640 15b36d077213599a5dc5f9398898f6dd 609 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 9 603 4.9E-294 T 14-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 DA442_00640 15b36d077213599a5dc5f9398898f6dd 609 Pfam PF00009 Elongation factor Tu GTP binding domain 8 198 7.6E-57 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_00640 15b36d077213599a5dc5f9398898f6dd 609 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site DA442_18545 665a6df910dc615dedb85feb5a04c348 332 Gene3D G3DSA:1.10.10.10 20 109 8.9E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_18545 665a6df910dc615dedb85feb5a04c348 332 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 66 77 9.3E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_18545 665a6df910dc615dedb85feb5a04c348 332 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 56 66 9.3E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_18545 665a6df910dc615dedb85feb5a04c348 332 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 9.3E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_18545 665a6df910dc615dedb85feb5a04c348 332 Gene3D G3DSA:3.40.190.10 193 297 6.0E-25 T 14-10-2018 DA442_18545 665a6df910dc615dedb85feb5a04c348 332 SUPERFAMILY SSF53850 112 322 6.15E-23 T 14-10-2018 DA442_18545 665a6df910dc615dedb85feb5a04c348 332 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 30 89 1.3E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_18545 665a6df910dc615dedb85feb5a04c348 332 Pfam PF03466 LysR substrate binding domain 120 322 3.2E-14 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_18545 665a6df910dc615dedb85feb5a04c348 332 SUPERFAMILY SSF46785 26 106 3.08E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_18545 665a6df910dc615dedb85feb5a04c348 332 Gene3D G3DSA:3.40.190.10 112 319 6.0E-25 T 14-10-2018 DA442_15905 52bfa85cf539db597865619718ca7881 228 SUPERFAMILY SSF56784 5 224 9.69E-62 T 14-10-2018 IPR036412 HAD-like superfamily DA442_15905 52bfa85cf539db597865619718ca7881 228 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 193 1.6E-39 T 14-10-2018 DA442_15905 52bfa85cf539db597865619718ca7881 228 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 83 194 4.1E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DA442_15905 52bfa85cf539db597865619718ca7881 228 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 89 193 4.0E-14 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 DA442_15905 52bfa85cf539db597865619718ca7881 228 Gene3D G3DSA:1.10.150.240 21 94 2.0E-65 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DA442_15905 52bfa85cf539db597865619718ca7881 228 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 9 223 7.1E-61 T 14-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 DA442_15905 52bfa85cf539db597865619718ca7881 228 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 6 225 36.188 T 14-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 DA442_15905 52bfa85cf539db597865619718ca7881 228 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 98 189 6.1E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DA442_15905 52bfa85cf539db597865619718ca7881 228 Gene3D G3DSA:3.40.50.1000 9 216 2.0E-65 T 14-10-2018 IPR023214 HAD superfamily DA442_23570 50792f1ef1ec4f42944109b84c19d011 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DA442_23570 50792f1ef1ec4f42944109b84c19d011 253 Gene3D G3DSA:3.40.50.720 1 253 1.0E-82 T 14-10-2018 DA442_23570 50792f1ef1ec4f42944109b84c19d011 253 SUPERFAMILY SSF51735 6 252 1.76E-77 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_23570 50792f1ef1ec4f42944109b84c19d011 253 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 6 253 6.5E-134 T 14-10-2018 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.127|MetaCyc: PWY-6507|MetaCyc: PWY-7562 DA442_23570 50792f1ef1ec4f42944109b84c19d011 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 8.4E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_23570 50792f1ef1ec4f42944109b84c19d011 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 8.4E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_23570 50792f1ef1ec4f42944109b84c19d011 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 8.4E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_23570 50792f1ef1ec4f42944109b84c19d011 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 1.6E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_23570 50792f1ef1ec4f42944109b84c19d011 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.6E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_23570 50792f1ef1ec4f42944109b84c19d011 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.6E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_23570 50792f1ef1ec4f42944109b84c19d011 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.6E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_23570 50792f1ef1ec4f42944109b84c19d011 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.6E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_23570 50792f1ef1ec4f42944109b84c19d011 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.6E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_23570 50792f1ef1ec4f42944109b84c19d011 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 250 1.5E-60 T 14-10-2018 DA442_16290 5c97abe1aef16cda845385b6f3aa277f 87 Pfam PF13937 Domain of unknown function (DUF4212) 9 86 1.1E-33 T 14-10-2018 IPR019886 Sodium symporter small subunit, predicted DA442_16290 5c97abe1aef16cda845385b6f3aa277f 87 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 11 87 2.3E-35 T 14-10-2018 IPR019886 Sodium symporter small subunit, predicted DA442_25340 fc2e48a027dc9c6132bc41266e90d94b 345 SUPERFAMILY SSF81345 5 339 3.66E-84 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DA442_25340 fc2e48a027dc9c6132bc41266e90d94b 345 Gene3D G3DSA:1.10.3470.10 5 344 1.8E-105 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DA442_25340 fc2e48a027dc9c6132bc41266e90d94b 345 Pfam PF01032 FecCD transport family 19 338 1.9E-92 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DA442_22590 31c1df3748c1bf422ffa539dc83beb02 726 SUPERFAMILY SSF55904 578 725 1.57E-44 T 14-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 DA442_22590 31c1df3748c1bf422ffa539dc83beb02 726 Gene3D G3DSA:3.90.1150.10 429 607 1.0E-67 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DA442_22590 31c1df3748c1bf422ffa539dc83beb02 726 SUPERFAMILY SSF53383 117 574 2.79E-118 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_22590 31c1df3748c1bf422ffa539dc83beb02 726 PIRSF PIRSF009393 1 726 5.6E-288 T 14-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 DA442_22590 31c1df3748c1bf422ffa539dc83beb02 726 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 19 111 1.9E-13 T 14-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 DA442_22590 31c1df3748c1bf422ffa539dc83beb02 726 TIGRFAM TIGR04301 ODC_inducible: ornithine decarboxylase SpeF 1 725 0.0 T 14-10-2018 IPR027568 Ornithine decarboxylase SpeF GO:0004586 KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 DA442_22590 31c1df3748c1bf422ffa539dc83beb02 726 SUPERFAMILY SSF52172 1 116 2.44E-25 T 14-10-2018 IPR011006 CheY-like superfamily DA442_22590 31c1df3748c1bf422ffa539dc83beb02 726 Gene3D G3DSA:3.90.100.10 608 726 3.1E-41 T 14-10-2018 DA442_22590 31c1df3748c1bf422ffa539dc83beb02 726 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 117 557 1.3E-186 T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 DA442_22590 31c1df3748c1bf422ffa539dc83beb02 726 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 358 372 - T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 DA442_22590 31c1df3748c1bf422ffa539dc83beb02 726 Gene3D G3DSA:3.40.640.10 117 427 1.3E-84 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_22590 31c1df3748c1bf422ffa539dc83beb02 726 Gene3D G3DSA:3.40.50.220 22 116 1.2E-12 T 14-10-2018 IPR027464 Ornithine decarboxylase, N-terminal KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 DA442_22590 31c1df3748c1bf422ffa539dc83beb02 726 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 583 711 5.1E-46 T 14-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 DA442_08675 b6134f7d23d6deda7a956a3f6d0d027e 162 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 49 68 5.2E-34 T 14-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD DA442_08675 b6134f7d23d6deda7a956a3f6d0d027e 162 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 24 47 5.2E-34 T 14-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD DA442_08675 b6134f7d23d6deda7a956a3f6d0d027e 162 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 105 127 5.2E-34 T 14-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD DA442_08675 b6134f7d23d6deda7a956a3f6d0d027e 162 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 73 95 5.2E-34 T 14-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD DA442_08675 b6134f7d23d6deda7a956a3f6d0d027e 162 PIRSF PIRSF003165 1 162 9.9E-59 T 14-10-2018 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup DA442_08675 b6134f7d23d6deda7a956a3f6d0d027e 162 Pfam PF07720 Tetratricopeptide repeat 39 70 3.0E-7 T 14-10-2018 IPR011716 Tetratricopeptide TPR-3 DA442_08675 b6134f7d23d6deda7a956a3f6d0d027e 162 Pfam PF07720 Tetratricopeptide repeat 77 98 0.11 T 14-10-2018 IPR011716 Tetratricopeptide TPR-3 DA442_08675 b6134f7d23d6deda7a956a3f6d0d027e 162 TIGRFAM TIGR02552 LcrH_SycD: type III secretion low calcium response chaperone LcrH/SycD 21 155 4.4E-44 T 14-10-2018 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD DA442_08675 b6134f7d23d6deda7a956a3f6d0d027e 162 Gene3D G3DSA:1.25.40.10 14 162 8.3E-53 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_08675 b6134f7d23d6deda7a956a3f6d0d027e 162 SUPERFAMILY SSF48452 27 148 5.69E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_18685 e3c71af454a90561970facf60c1e794a 467 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 22 461 6.2E-117 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 DA442_18685 e3c71af454a90561970facf60c1e794a 467 PIRSF PIRSF002457 2 467 3.0E-140 T 14-10-2018 IPR030676 Citrate carrier CitT-related DA442_18685 e3c71af454a90561970facf60c1e794a 467 Pfam PF00939 Sodium:sulfate symporter transmembrane region 5 467 6.1E-143 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 DA442_12695 e41b4b0285cb8279cf9d9097b9915bf8 528 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 135 163 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 DA442_12695 e41b4b0285cb8279cf9d9097b9915bf8 528 Pfam PF01464 Transglycosylase SLT domain 127 228 8.6E-23 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 DA442_12695 e41b4b0285cb8279cf9d9097b9915bf8 528 SUPERFAMILY SSF54106 345 388 7.06E-11 T 14-10-2018 DA442_12695 e41b4b0285cb8279cf9d9097b9915bf8 528 Gene3D G3DSA:1.10.530.10 110 263 2.9E-29 T 14-10-2018 DA442_12695 e41b4b0285cb8279cf9d9097b9915bf8 528 Pfam PF01476 LysM domain 346 388 2.5E-13 T 14-10-2018 IPR018392 LysM domain DA442_12695 e41b4b0285cb8279cf9d9097b9915bf8 528 Pfam PF01476 LysM domain 477 519 1.2E-10 T 14-10-2018 IPR018392 LysM domain DA442_12695 e41b4b0285cb8279cf9d9097b9915bf8 528 Pfam PF01476 LysM domain 420 463 2.0E-11 T 14-10-2018 IPR018392 LysM domain DA442_12695 e41b4b0285cb8279cf9d9097b9915bf8 528 Gene3D G3DSA:3.10.350.10 474 522 8.8E-13 T 14-10-2018 IPR036779 LysM domain superfamily DA442_12695 e41b4b0285cb8279cf9d9097b9915bf8 528 Gene3D G3DSA:3.10.350.10 331 399 8.2E-16 T 14-10-2018 IPR036779 LysM domain superfamily DA442_12695 e41b4b0285cb8279cf9d9097b9915bf8 528 Gene3D G3DSA:3.10.350.10 404 471 6.2E-15 T 14-10-2018 IPR036779 LysM domain superfamily DA442_12695 e41b4b0285cb8279cf9d9097b9915bf8 528 SMART SM00257 345 388 3.6E-14 T 14-10-2018 IPR018392 LysM domain DA442_12695 e41b4b0285cb8279cf9d9097b9915bf8 528 SMART SM00257 476 520 1.8E-9 T 14-10-2018 IPR018392 LysM domain DA442_12695 e41b4b0285cb8279cf9d9097b9915bf8 528 SMART SM00257 419 463 8.2E-13 T 14-10-2018 IPR018392 LysM domain DA442_12695 e41b4b0285cb8279cf9d9097b9915bf8 528 SUPERFAMILY SSF54106 419 463 9.29E-11 T 14-10-2018 DA442_12695 e41b4b0285cb8279cf9d9097b9915bf8 528 SUPERFAMILY SSF53955 114 271 8.72E-42 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily DA442_12695 e41b4b0285cb8279cf9d9097b9915bf8 528 SUPERFAMILY SSF54106 474 521 7.72E-10 T 14-10-2018 DA442_13600 463ea175cc991831ccbad14543bce77c 374 Pfam PF09673 Type-F conjugative transfer system pilin assembly protein 74 164 5.9E-22 T 14-10-2018 IPR019106 Type-F conjugative transfer system pilin assembly protein TrbC DA442_13705 a3fb8b06d68a0ce88ee16cd26f6c120d 883 SUPERFAMILY SSF89550 37 159 6.28E-11 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 DA442_13705 a3fb8b06d68a0ce88ee16cd26f6c120d 883 Gene3D G3DSA:3.40.50.300 263 503 6.7E-16 T 14-10-2018 DA442_13705 a3fb8b06d68a0ce88ee16cd26f6c120d 883 Gene3D G3DSA:3.20.20.140 31 230 4.9E-15 T 14-10-2018 DA442_13705 a3fb8b06d68a0ce88ee16cd26f6c120d 883 Pfam PF13476 AAA domain 267 603 1.4E-6 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain DA442_13705 a3fb8b06d68a0ce88ee16cd26f6c120d 883 SUPERFAMILY SSF52540 271 828 9.35E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_23215 8f92aa2c197f152cba45f6172fffe75c 297 SUPERFAMILY SSF52540 28 276 5.32E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_23215 8f92aa2c197f152cba45f6172fffe75c 297 SMART SM00382 57 263 1.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_23215 8f92aa2c197f152cba45f6172fffe75c 297 Gene3D G3DSA:3.40.50.300 26 296 1.9E-85 T 14-10-2018 DA442_23215 8f92aa2c197f152cba45f6172fffe75c 297 Pfam PF00005 ABC transporter 49 204 1.3E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_23215 8f92aa2c197f152cba45f6172fffe75c 297 ProSitePatterns PS00211 ABC transporters family signature. 177 191 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_05525 5e5d49f6725900b73d817a85124eb5b9 174 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 5 174 30.802 T 14-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 DA442_05525 5e5d49f6725900b73d817a85124eb5b9 174 PRINTS PR01021 OMPA domain signature 74 96 9.4E-17 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DA442_05525 5e5d49f6725900b73d817a85124eb5b9 174 PRINTS PR01021 OMPA domain signature 119 135 9.4E-17 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DA442_05525 5e5d49f6725900b73d817a85124eb5b9 174 PRINTS PR01021 OMPA domain signature 104 119 9.4E-17 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DA442_05525 5e5d49f6725900b73d817a85124eb5b9 174 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 71 174 2.5E-44 T 14-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 DA442_05525 5e5d49f6725900b73d817a85124eb5b9 174 ProSitePatterns PS01068 OmpA-like domain. 106 150 - T 14-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 DA442_05525 5e5d49f6725900b73d817a85124eb5b9 174 Pfam PF00691 OmpA family 73 168 5.4E-23 T 14-10-2018 IPR006665 OmpA-like domain DA442_05525 5e5d49f6725900b73d817a85124eb5b9 174 SUPERFAMILY SSF103088 57 173 9.03E-34 T 14-10-2018 IPR036737 OmpA-like domain superfamily DA442_05525 5e5d49f6725900b73d817a85124eb5b9 174 Gene3D G3DSA:3.30.1330.60 45 174 1.0E-40 T 14-10-2018 IPR036737 OmpA-like domain superfamily DA442_17150 3547c01d2b07e854997dc76d47021a3b 288 Hamap MF_00697 UPF0276 protein . 10 282 43.929 T 14-10-2018 IPR007801 Uncharacterised protein family UPF0276 DA442_17150 3547c01d2b07e854997dc76d47021a3b 288 SUPERFAMILY SSF51658 30 256 1.93E-11 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily DA442_17150 3547c01d2b07e854997dc76d47021a3b 288 Gene3D G3DSA:3.20.20.150 8 284 5.9E-85 T 14-10-2018 DA442_17150 3547c01d2b07e854997dc76d47021a3b 288 Pfam PF05114 Protein of unknown function (DUF692) 10 272 4.4E-105 T 14-10-2018 IPR007801 Uncharacterised protein family UPF0276 DA442_03610 aeacf76cc294c13f0711566bf49b010a 269 PIRSF PIRSF002854 1 269 7.4E-99 T 14-10-2018 IPR004872 Lipoprotein NlpA family DA442_03610 aeacf76cc294c13f0711566bf49b010a 269 Gene3D G3DSA:3.40.190.10 34 263 1.4E-93 T 14-10-2018 DA442_03610 aeacf76cc294c13f0711566bf49b010a 269 SUPERFAMILY SSF53850 32 269 3.49E-78 T 14-10-2018 DA442_03610 aeacf76cc294c13f0711566bf49b010a 269 Gene3D G3DSA:3.40.190.10 115 219 1.4E-93 T 14-10-2018 DA442_03610 aeacf76cc294c13f0711566bf49b010a 269 Pfam PF03180 NLPA lipoprotein 33 269 7.1E-98 T 14-10-2018 IPR004872 Lipoprotein NlpA family DA442_03610 aeacf76cc294c13f0711566bf49b010a 269 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 15 269 1.0E-126 T 14-10-2018 IPR004872 Lipoprotein NlpA family DA442_19535 bbfb185c4f1b78451d1e46d0c308d7b7 398 SUPERFAMILY SSF53383 1 394 7.45E-101 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_19535 bbfb185c4f1b78451d1e46d0c308d7b7 398 Gene3D G3DSA:3.40.640.10 48 315 4.6E-138 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_19535 bbfb185c4f1b78451d1e46d0c308d7b7 398 PRINTS PR00799 Aspartate aminotransferase signature 273 298 5.3E-28 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 DA442_19535 bbfb185c4f1b78451d1e46d0c308d7b7 398 PRINTS PR00799 Aspartate aminotransferase signature 206 218 5.3E-28 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 DA442_19535 bbfb185c4f1b78451d1e46d0c308d7b7 398 PRINTS PR00799 Aspartate aminotransferase signature 175 194 5.3E-28 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 DA442_19535 bbfb185c4f1b78451d1e46d0c308d7b7 398 PRINTS PR00799 Aspartate aminotransferase signature 341 359 5.3E-28 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 DA442_19535 bbfb185c4f1b78451d1e46d0c308d7b7 398 Gene3D G3DSA:3.90.1150.10 14 392 4.6E-138 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DA442_19535 bbfb185c4f1b78451d1e46d0c308d7b7 398 Pfam PF00155 Aminotransferase class I and II 30 392 5.7E-66 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DA442_11050 4572df3d90120b9383713bbba2ef4ae2 230 Pfam PF00027 Cyclic nucleotide-binding domain 32 119 1.7E-14 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain DA442_11050 4572df3d90120b9383713bbba2ef4ae2 230 SUPERFAMILY SSF46785 149 225 5.97E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_11050 4572df3d90120b9383713bbba2ef4ae2 230 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 176 192 2.4E-5 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DA442_11050 4572df3d90120b9383713bbba2ef4ae2 230 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 192 207 2.4E-5 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DA442_11050 4572df3d90120b9383713bbba2ef4ae2 230 SUPERFAMILY SSF51206 1 142 7.07E-27 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like DA442_11050 4572df3d90120b9383713bbba2ef4ae2 230 Pfam PF13545 Crp-like helix-turn-helix domain 151 224 2.8E-13 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DA442_11050 4572df3d90120b9383713bbba2ef4ae2 230 Gene3D G3DSA:1.10.10.10 149 228 6.3E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_11050 4572df3d90120b9383713bbba2ef4ae2 230 Gene3D G3DSA:2.60.120.10 2 145 9.8E-24 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DA442_11050 4572df3d90120b9383713bbba2ef4ae2 230 SMART SM00100 13 131 2.9E-11 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain DA442_11050 4572df3d90120b9383713bbba2ef4ae2 230 SMART SM00419 170 218 5.4E-6 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DA442_21335 1e2eb3ed9625a8ce765a3c2029eb66d0 134 Gene3D G3DSA:3.30.70.1070 32 125 9.1E-20 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 DA442_21335 1e2eb3ed9625a8ce765a3c2029eb66d0 134 Pfam PF05036 Sporulation related domain 43 117 1.1E-12 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 DA442_21335 1e2eb3ed9625a8ce765a3c2029eb66d0 134 SUPERFAMILY SSF110997 43 110 1.1E-5 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 DA442_22835 5b7553d809f76b4dc5e0b6ddb63501c5 522 Gene3D G3DSA:3.50.50.60 213 510 2.0E-105 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_22835 5b7553d809f76b4dc5e0b6ddb63501c5 522 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 213 506 1.3E-41 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DA442_22835 5b7553d809f76b4dc5e0b6ddb63501c5 522 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 520 2.7E-248 T 14-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 DA442_22835 5b7553d809f76b4dc5e0b6ddb63501c5 522 SUPERFAMILY SSF51905 204 516 3.27E-49 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_22835 5b7553d809f76b4dc5e0b6ddb63501c5 522 Gene3D G3DSA:3.40.30.80 1 200 5.6E-65 T 14-10-2018 DA442_22835 5b7553d809f76b4dc5e0b6ddb63501c5 522 Pfam PF13192 Thioredoxin domain 120 194 3.3E-12 T 14-10-2018 IPR012336 Thioredoxin-like fold DA442_22835 5b7553d809f76b4dc5e0b6ddb63501c5 522 SUPERFAMILY SSF52833 104 197 1.01E-23 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_22835 5b7553d809f76b4dc5e0b6ddb63501c5 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 215 234 2.3E-35 T 14-10-2018 DA442_22835 5b7553d809f76b4dc5e0b6ddb63501c5 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 316 334 2.3E-35 T 14-10-2018 DA442_22835 5b7553d809f76b4dc5e0b6ddb63501c5 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 443 459 2.3E-35 T 14-10-2018 DA442_22835 5b7553d809f76b4dc5e0b6ddb63501c5 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 358 376 2.3E-35 T 14-10-2018 DA442_22835 5b7553d809f76b4dc5e0b6ddb63501c5 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 470 492 2.3E-35 T 14-10-2018 DA442_22835 5b7553d809f76b4dc5e0b6ddb63501c5 522 PIRSF PIRSF000238 1 522 1.5E-254 T 14-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 DA442_22835 5b7553d809f76b4dc5e0b6ddb63501c5 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 317 325 5.4E-60 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DA442_22835 5b7553d809f76b4dc5e0b6ddb63501c5 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 354 378 5.4E-60 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DA442_22835 5b7553d809f76b4dc5e0b6ddb63501c5 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 406 422 5.4E-60 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DA442_22835 5b7553d809f76b4dc5e0b6ddb63501c5 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 214 236 5.4E-60 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DA442_22835 5b7553d809f76b4dc5e0b6ddb63501c5 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 480 498 5.4E-60 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DA442_22835 5b7553d809f76b4dc5e0b6ddb63501c5 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 339 351 5.4E-60 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DA442_22835 5b7553d809f76b4dc5e0b6ddb63501c5 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 445 466 5.4E-60 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DA442_22835 5b7553d809f76b4dc5e0b6ddb63501c5 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 246 261 5.4E-60 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DA442_22835 5b7553d809f76b4dc5e0b6ddb63501c5 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 276 5.4E-60 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DA442_22835 5b7553d809f76b4dc5e0b6ddb63501c5 522 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 346 366 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 DA442_22835 5b7553d809f76b4dc5e0b6ddb63501c5 522 SUPERFAMILY SSF52833 1 101 2.91E-26 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_22835 5b7553d809f76b4dc5e0b6ddb63501c5 522 Gene3D G3DSA:3.50.50.60 328 451 2.0E-105 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_24095 7ab3d045b78bd3d1958a273b456af93c 296 Gene3D G3DSA:3.40.190.10 91 280 3.6E-16 T 14-10-2018 DA442_24095 7ab3d045b78bd3d1958a273b456af93c 296 Gene3D G3DSA:3.40.190.10 163 268 3.6E-16 T 14-10-2018 DA442_24095 7ab3d045b78bd3d1958a273b456af93c 296 SUPERFAMILY SSF46785 2 111 5.2E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_24095 7ab3d045b78bd3d1958a273b456af93c 296 SUPERFAMILY SSF53850 88 291 1.16E-29 T 14-10-2018 DA442_24095 7ab3d045b78bd3d1958a273b456af93c 296 Pfam PF03466 LysR substrate binding domain 89 284 3.8E-27 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_24095 7ab3d045b78bd3d1958a273b456af93c 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 4.2E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_24095 7ab3d045b78bd3d1958a273b456af93c 296 Gene3D G3DSA:1.10.10.10 5 69 2.5E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_24095 7ab3d045b78bd3d1958a273b456af93c 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_24095 7ab3d045b78bd3d1958a273b456af93c 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_24095 7ab3d045b78bd3d1958a273b456af93c 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_12710 943aaa215ef47f45b21e24f488989328 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.0E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DA442_12710 943aaa215ef47f45b21e24f488989328 112 PRINTS PR00340 P-II protein signature 52 75 3.9E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DA442_12710 943aaa215ef47f45b21e24f488989328 112 PRINTS PR00340 P-II protein signature 83 103 3.9E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DA442_12710 943aaa215ef47f45b21e24f488989328 112 PRINTS PR00340 P-II protein signature 23 41 3.9E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DA442_12710 943aaa215ef47f45b21e24f488989328 112 PRINTS PR00340 P-II protein signature 2 17 3.9E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DA442_12710 943aaa215ef47f45b21e24f488989328 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 14-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 DA442_12710 943aaa215ef47f45b21e24f488989328 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 DA442_12710 943aaa215ef47f45b21e24f488989328 112 PIRSF PIRSF039144 1 112 2.6E-58 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DA442_12710 943aaa215ef47f45b21e24f488989328 112 SUPERFAMILY SSF54913 1 112 1.94E-47 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta DA442_12710 943aaa215ef47f45b21e24f488989328 112 SMART SM00938 4 105 7.9E-70 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DA442_12710 943aaa215ef47f45b21e24f488989328 112 Gene3D G3DSA:3.30.70.120 1 112 9.2E-49 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DA442_18280 11a03151354d4ae967d4fb6587c168df 771 SUPERFAMILY SSF48452 576 717 1.37E-20 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_18280 11a03151354d4ae967d4fb6587c168df 771 Gene3D G3DSA:1.10.1130.10 152 353 1.8E-19 T 14-10-2018 DA442_18280 11a03151354d4ae967d4fb6587c168df 771 Pfam PF13435 Cytochrome c554 and c-prime 44 72 0.027 T 14-10-2018 IPR023155 Cytochrome c-552/4 DA442_18280 11a03151354d4ae967d4fb6587c168df 771 Pfam PF13435 Cytochrome c554 and c-prime 177 215 6.6E-4 T 14-10-2018 IPR023155 Cytochrome c-552/4 DA442_18280 11a03151354d4ae967d4fb6587c168df 771 SUPERFAMILY SSF48695 38 578 5.41E-75 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily DA442_18280 11a03151354d4ae967d4fb6587c168df 771 Pfam PF13432 Tetratricopeptide repeat 659 702 6.4E-4 T 14-10-2018 DA442_18280 11a03151354d4ae967d4fb6587c168df 771 SMART SM00028 621 654 10.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_18280 11a03151354d4ae967d4fb6587c168df 771 SMART SM00028 587 620 2.2E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_18280 11a03151354d4ae967d4fb6587c168df 771 SMART SM00028 655 688 230.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_18280 11a03151354d4ae967d4fb6587c168df 771 Pfam PF13414 TPR repeat 595 635 9.7E-8 T 14-10-2018 DA442_18280 11a03151354d4ae967d4fb6587c168df 771 Gene3D G3DSA:1.25.40.10 583 759 2.7E-23 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_04615 7bc9d38f8e753f711a7900fa15bd6c3d 241 Gene3D G3DSA:3.40.50.720 3 241 3.6E-73 T 14-10-2018 DA442_04615 7bc9d38f8e753f711a7900fa15bd6c3d 241 TIGRFAM TIGR01831 fabG_rel: putative 3-oxoacyl-(acyl-carrier-protein) reductase 5 241 1.5E-124 T 14-10-2018 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DA442_04615 7bc9d38f8e753f711a7900fa15bd6c3d 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.6E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_04615 7bc9d38f8e753f711a7900fa15bd6c3d 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.6E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_04615 7bc9d38f8e753f711a7900fa15bd6c3d 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.6E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_04615 7bc9d38f8e753f711a7900fa15bd6c3d 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 240 3.1E-57 T 14-10-2018 DA442_04615 7bc9d38f8e753f711a7900fa15bd6c3d 241 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 194 9.6E-4 T 14-10-2018 DA442_04615 7bc9d38f8e753f711a7900fa15bd6c3d 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.7E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_04615 7bc9d38f8e753f711a7900fa15bd6c3d 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.7E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_04615 7bc9d38f8e753f711a7900fa15bd6c3d 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 2.7E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_04615 7bc9d38f8e753f711a7900fa15bd6c3d 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.7E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_04615 7bc9d38f8e753f711a7900fa15bd6c3d 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.7E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_04615 7bc9d38f8e753f711a7900fa15bd6c3d 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.7E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_04615 7bc9d38f8e753f711a7900fa15bd6c3d 241 SUPERFAMILY SSF51735 3 240 1.75E-73 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_06815 7736e1e1a31a9bd6d75366b755124be7 508 Pfam PF00171 Aldehyde dehydrogenase family 7 452 1.3E-49 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DA442_06815 7736e1e1a31a9bd6d75366b755124be7 508 Gene3D G3DSA:3.40.605.10 31 505 3.0E-212 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DA442_06815 7736e1e1a31a9bd6d75366b755124be7 508 Gene3D G3DSA:3.40.309.10 256 440 3.0E-212 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DA442_06815 7736e1e1a31a9bd6d75366b755124be7 508 SUPERFAMILY SSF53720 6 502 7.85E-102 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DA442_12995 95b32fade125251c5bcfa73903b4295c 450 Gene3D G3DSA:1.20.1250.20 11 219 2.5E-11 T 14-10-2018 DA442_12995 95b32fade125251c5bcfa73903b4295c 450 Gene3D G3DSA:1.20.1250.20 248 441 4.8E-8 T 14-10-2018 DA442_12995 95b32fade125251c5bcfa73903b4295c 450 SUPERFAMILY SSF103473 11 436 1.05E-33 T 14-10-2018 IPR036259 MFS transporter superfamily DA442_12995 95b32fade125251c5bcfa73903b4295c 450 Pfam PF07690 Major Facilitator Superfamily 24 397 7.3E-17 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DA442_10735 e3b1e5baea22d43c72fe68683e271fe2 627 Gene3D G3DSA:3.30.450.20 50 264 6.3E-55 T 14-10-2018 DA442_10735 e3b1e5baea22d43c72fe68683e271fe2 627 Pfam PF00672 HAMP domain 300 346 1.6E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_10735 e3b1e5baea22d43c72fe68683e271fe2 627 Gene3D G3DSA:1.10.287.950 297 627 2.6E-73 T 14-10-2018 DA442_10735 e3b1e5baea22d43c72fe68683e271fe2 627 SMART SM00304 296 350 3.4E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_10735 e3b1e5baea22d43c72fe68683e271fe2 627 SMART SM00304 353 403 4.3 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_10735 e3b1e5baea22d43c72fe68683e271fe2 627 Gene3D G3DSA:3.30.450.20 60 168 6.3E-55 T 14-10-2018 DA442_10735 e3b1e5baea22d43c72fe68683e271fe2 627 SUPERFAMILY SSF58104 318 627 9.02E-77 T 14-10-2018 DA442_10735 e3b1e5baea22d43c72fe68683e271fe2 627 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 426 593 1.0E-39 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_10735 e3b1e5baea22d43c72fe68683e271fe2 627 SMART SM00283 365 626 7.1E-65 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_10735 e3b1e5baea22d43c72fe68683e271fe2 627 SUPERFAMILY SSF103190 89 175 2.62E-12 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily DA442_10735 e3b1e5baea22d43c72fe68683e271fe2 627 Pfam PF02743 Cache domain 41 258 1.4E-33 T 14-10-2018 IPR033479 Double Cache domain 1 DA442_11945 97775f6e7f683b7e595678b113fd69d5 667 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 375 627 1.2E-25 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DA442_11945 97775f6e7f683b7e595678b113fd69d5 667 Gene3D G3DSA:3.20.20.70 1 367 6.6E-121 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_11945 97775f6e7f683b7e595678b113fd69d5 667 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 328 1.8E-82 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 DA442_11945 97775f6e7f683b7e595678b113fd69d5 667 PRINTS PR00419 Adrenodoxin reductase family signature 398 411 1.4E-9 T 14-10-2018 DA442_11945 97775f6e7f683b7e595678b113fd69d5 667 PRINTS PR00419 Adrenodoxin reductase family signature 375 397 1.4E-9 T 14-10-2018 DA442_11945 97775f6e7f683b7e595678b113fd69d5 667 Gene3D G3DSA:3.50.50.60 468 620 1.6E-108 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_11945 97775f6e7f683b7e595678b113fd69d5 667 SUPERFAMILY SSF51971 373 622 2.47E-41 T 14-10-2018 DA442_11945 97775f6e7f683b7e595678b113fd69d5 667 Gene3D G3DSA:3.40.50.720 374 661 1.6E-108 T 14-10-2018 DA442_11945 97775f6e7f683b7e595678b113fd69d5 667 SUPERFAMILY SSF51395 2 361 4.15E-108 T 14-10-2018 DA442_06680 cfd885344e9721c110d3a05f043de630 457 SUPERFAMILY SSF118215 29 441 1.26E-91 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 DA442_06680 cfd885344e9721c110d3a05f043de630 457 Gene3D G3DSA:1.10.3860.10 5 456 6.1E-98 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 DA442_06680 cfd885344e9721c110d3a05f043de630 457 PRINTS PR00173 Glutamate-aspartate symporter signature 259 278 7.8E-31 T 14-10-2018 DA442_06680 cfd885344e9721c110d3a05f043de630 457 PRINTS PR00173 Glutamate-aspartate symporter signature 369 388 7.8E-31 T 14-10-2018 DA442_06680 cfd885344e9721c110d3a05f043de630 457 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 7.8E-31 T 14-10-2018 DA442_06680 cfd885344e9721c110d3a05f043de630 457 PRINTS PR00173 Glutamate-aspartate symporter signature 396 416 7.8E-31 T 14-10-2018 DA442_06680 cfd885344e9721c110d3a05f043de630 457 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 7.8E-31 T 14-10-2018 DA442_06680 cfd885344e9721c110d3a05f043de630 457 PRINTS PR00173 Glutamate-aspartate symporter signature 181 203 7.8E-31 T 14-10-2018 DA442_06680 cfd885344e9721c110d3a05f043de630 457 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 7.8E-31 T 14-10-2018 DA442_06680 cfd885344e9721c110d3a05f043de630 457 Pfam PF00375 Sodium:dicarboxylate symporter family 32 441 4.7E-99 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DA442_15270 c1eeeb1e2108cd5162040211ced02813 347 Gene3D G3DSA:3.30.420.40 14 331 5.4E-131 T 14-10-2018 DA442_15270 c1eeeb1e2108cd5162040211ced02813 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 1.4E-165 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DA442_15270 c1eeeb1e2108cd5162040211ced02813 347 Gene3D G3DSA:3.90.640.10 190 263 5.4E-131 T 14-10-2018 DA442_15270 c1eeeb1e2108cd5162040211ced02813 347 SUPERFAMILY SSF53067 154 340 5.11E-50 T 14-10-2018 DA442_15270 c1eeeb1e2108cd5162040211ced02813 347 SUPERFAMILY SSF53067 9 152 2.35E-37 T 14-10-2018 DA442_15270 c1eeeb1e2108cd5162040211ced02813 347 Pfam PF06723 MreB/Mbl protein 11 338 1.8E-148 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DA442_15270 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 2.5E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DA442_15270 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 2.5E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DA442_15270 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 2.5E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DA442_15270 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 2.5E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DA442_15270 c1eeeb1e2108cd5162040211ced02813 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 2.5E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DA442_15270 c1eeeb1e2108cd5162040211ced02813 347 Gene3D G3DSA:3.30.420.40 158 321 5.4E-131 T 14-10-2018 DA442_15705 31e7f2713f4139dab4966c9ccfbbde22 386 SUPERFAMILY SSF53383 9 381 8.97E-117 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_15705 31e7f2713f4139dab4966c9ccfbbde22 386 PIRSF PIRSF001434 1 385 2.1E-131 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DA442_15705 31e7f2713f4139dab4966c9ccfbbde22 386 Gene3D G3DSA:3.40.640.10 3 248 4.9E-83 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_15705 31e7f2713f4139dab4966c9ccfbbde22 386 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 381 1.0E-135 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DA442_15705 31e7f2713f4139dab4966c9ccfbbde22 386 Gene3D G3DSA:3.90.1150.10 249 386 8.9E-51 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DA442_15705 31e7f2713f4139dab4966c9ccfbbde22 386 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 191 205 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DA442_15705 31e7f2713f4139dab4966c9ccfbbde22 386 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 4 382 3.6E-201 T 14-10-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 DA442_03290 0577edcc20162ae3fb4565cd89f8c062 296 SUPERFAMILY SSF53850 96 293 2.17E-24 T 14-10-2018 DA442_03290 0577edcc20162ae3fb4565cd89f8c062 296 SUPERFAMILY SSF46785 4 117 1.49E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_03290 0577edcc20162ae3fb4565cd89f8c062 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 6.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_03290 0577edcc20162ae3fb4565cd89f8c062 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 6.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_03290 0577edcc20162ae3fb4565cd89f8c062 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 6.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_03290 0577edcc20162ae3fb4565cd89f8c062 296 Gene3D G3DSA:1.10.10.10 9 97 3.5E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_03290 0577edcc20162ae3fb4565cd89f8c062 296 Pfam PF03466 LysR substrate binding domain 96 292 2.2E-20 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_03290 0577edcc20162ae3fb4565cd89f8c062 296 Gene3D G3DSA:3.40.190.10 166 263 3.4E-60 T 14-10-2018 DA442_03290 0577edcc20162ae3fb4565cd89f8c062 296 Gene3D G3DSA:3.40.190.10 103 289 3.4E-60 T 14-10-2018 DA442_03290 0577edcc20162ae3fb4565cd89f8c062 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 3.7E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_20005 dbc507a454f39e242fcd2fca20441a03 265 PIRSF PIRSF029288 1 265 7.7E-93 T 14-10-2018 IPR009211 Predicted virulence protein, SciE type DA442_20005 dbc507a454f39e242fcd2fca20441a03 265 Pfam PF07024 ImpE protein 139 258 2.6E-34 T 14-10-2018 IPR009211 Predicted virulence protein, SciE type DA442_20005 dbc507a454f39e242fcd2fca20441a03 265 Gene3D G3DSA:1.25.40.10 3 86 1.6E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_20005 dbc507a454f39e242fcd2fca20441a03 265 SUPERFAMILY SSF144059 4 261 4.32E-85 T 14-10-2018 DA442_14160 67f846bf3734d4c80489bb4cf3c4e59d 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 258 5.4E-108 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 DA442_14160 67f846bf3734d4c80489bb4cf3c4e59d 264 Gene3D G3DSA:3.20.20.60 1 263 3.5E-106 T 14-10-2018 DA442_14160 67f846bf3734d4c80489bb4cf3c4e59d 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 41.345 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 DA442_14160 67f846bf3734d4c80489bb4cf3c4e59d 264 PIRSF PIRSF000388 1 264 1.3E-100 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 DA442_14160 67f846bf3734d4c80489bb4cf3c4e59d 264 SUPERFAMILY SSF51621 3 262 1.26E-105 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DA442_14160 67f846bf3734d4c80489bb4cf3c4e59d 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 262 4.2E-114 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 DA442_19605 06588bbe6b038b444739e39a148a3f58 774 SUPERFAMILY SSF53706 48 631 8.11E-150 T 14-10-2018 DA442_19605 06588bbe6b038b444739e39a148a3f58 774 Pfam PF01568 Molydopterin dinucleotide binding domain 649 736 7.8E-8 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 DA442_19605 06588bbe6b038b444739e39a148a3f58 774 PIRSF PIRSF000144 1 767 0.0 T 14-10-2018 DA442_19605 06588bbe6b038b444739e39a148a3f58 774 Pfam PF00384 Molybdopterin oxidoreductase 110 492 6.4E-25 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DA442_19605 06588bbe6b038b444739e39a148a3f58 774 Gene3D G3DSA:3.40.50.740 121 498 3.6E-68 T 14-10-2018 DA442_19605 06588bbe6b038b444739e39a148a3f58 774 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 14 762 3.4E-292 T 14-10-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 DA442_19605 06588bbe6b038b444739e39a148a3f58 774 Gene3D G3DSA:3.40.228.10 182 404 3.6E-68 T 14-10-2018 DA442_19605 06588bbe6b038b444739e39a148a3f58 774 SUPERFAMILY SSF50692 645 764 1.88E-16 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily DA442_18460 f2226906d68365424c34179588240f61 302 SUPERFAMILY SSF53850 96 242 1.09E-5 T 14-10-2018 DA442_18460 f2226906d68365424c34179588240f61 302 SUPERFAMILY SSF46785 4 114 4.71E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_18460 f2226906d68365424c34179588240f61 302 Gene3D G3DSA:1.10.10.10 4 89 1.8E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_18460 f2226906d68365424c34179588240f61 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 68 1.2E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_18460 f2226906d68365424c34179588240f61 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 1.0E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_18460 f2226906d68365424c34179588240f61 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 1.0E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_18460 f2226906d68365424c34179588240f61 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 1.0E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_10790 45b2a4a90e8d3c10f0550aad5a05f6ea 186 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 11 35 1.8E-4 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DA442_10790 45b2a4a90e8d3c10f0550aad5a05f6ea 186 Gene3D G3DSA:3.30.1380.10 68 186 2.9E-10 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 DA442_10790 45b2a4a90e8d3c10f0550aad5a05f6ea 186 Pfam PF05951 Bacterial protein of unknown function (DUF882) 39 186 5.5E-67 T 14-10-2018 IPR010275 Protein of unknown function DUF882 DA442_10790 45b2a4a90e8d3c10f0550aad5a05f6ea 186 SUPERFAMILY SSF55166 72 186 9.81E-33 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 DA442_22180 8c0d8a67e42fc04b30e066403fb3a0e7 284 Pfam PF00700 Bacterial flagellin C-terminal helical region 198 283 4.6E-29 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DA442_22180 8c0d8a67e42fc04b30e066403fb3a0e7 284 PRINTS PR00207 Flagellin signature 76 95 1.8E-20 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DA442_22180 8c0d8a67e42fc04b30e066403fb3a0e7 284 PRINTS PR00207 Flagellin signature 111 134 1.8E-20 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DA442_22180 8c0d8a67e42fc04b30e066403fb3a0e7 284 PRINTS PR00207 Flagellin signature 37 54 1.8E-20 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DA442_22180 8c0d8a67e42fc04b30e066403fb3a0e7 284 Gene3D G3DSA:1.20.58.1830 7 33 3.2E-62 T 14-10-2018 DA442_22180 8c0d8a67e42fc04b30e066403fb3a0e7 284 Pfam PF00669 Bacterial flagellin N-terminal helical region 6 140 4.5E-45 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DA442_22180 8c0d8a67e42fc04b30e066403fb3a0e7 284 Gene3D G3DSA:1.10.8.410 232 284 1.2E-18 T 14-10-2018 DA442_22180 8c0d8a67e42fc04b30e066403fb3a0e7 284 SUPERFAMILY SSF64518 1 284 2.88E-78 T 14-10-2018 DA442_22180 8c0d8a67e42fc04b30e066403fb3a0e7 284 Gene3D G3DSA:1.20.1330.10 45 170 3.2E-62 T 14-10-2018 DA442_14625 8cbf8e335cedac5865c9823bb724bf7f 392 Gene3D G3DSA:3.50.50.60 5 336 4.2E-94 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_14625 8cbf8e335cedac5865c9823bb724bf7f 392 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 5 388 1.1E-144 T 14-10-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 DA442_14625 8cbf8e335cedac5865c9823bb724bf7f 392 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 14-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 DA442_14625 8cbf8e335cedac5865c9823bb724bf7f 392 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 388 4.3E-121 T 14-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 DA442_14625 8cbf8e335cedac5865c9823bb724bf7f 392 Gene3D G3DSA:3.30.9.50 81 270 4.2E-94 T 14-10-2018 DA442_14625 8cbf8e335cedac5865c9823bb724bf7f 392 Pfam PF01494 FAD binding domain 4 337 2.6E-23 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 DA442_14625 8cbf8e335cedac5865c9823bb724bf7f 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 2.6E-10 T 14-10-2018 DA442_14625 8cbf8e335cedac5865c9823bb724bf7f 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 2.6E-10 T 14-10-2018 DA442_14625 8cbf8e335cedac5865c9823bb724bf7f 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 2.6E-10 T 14-10-2018 DA442_14625 8cbf8e335cedac5865c9823bb724bf7f 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 2.6E-10 T 14-10-2018 DA442_14625 8cbf8e335cedac5865c9823bb724bf7f 392 SUPERFAMILY SSF51905 3 382 5.47E-47 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_15155 1fa5018afacf5cb0a109c14160d8bbb9 164 Gene3D G3DSA:2.60.450.10 20 157 1.4E-41 T 14-10-2018 DA442_15155 1fa5018afacf5cb0a109c14160d8bbb9 164 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 1 160 24.676 T 14-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 DA442_15155 1fa5018afacf5cb0a109c14160d8bbb9 164 Pfam PF03968 OstA-like protein 30 141 7.1E-30 T 14-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal DA442_15155 1fa5018afacf5cb0a109c14160d8bbb9 164 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 20 160 1.2E-47 T 14-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 DA442_02685 8514785cb2ba826b0ac823b1d44108cd 283 Hamap MF_00008 Thymidylate synthase [thyA]. 1 283 33.655 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DA442_02685 8514785cb2ba826b0ac823b1d44108cd 283 SUPERFAMILY SSF55831 2 283 1.44E-92 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DA442_02685 8514785cb2ba826b0ac823b1d44108cd 283 PRINTS PR00108 Thymidylate synthase family signature 211 228 1.5E-14 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DA442_02685 8514785cb2ba826b0ac823b1d44108cd 283 PRINTS PR00108 Thymidylate synthase family signature 44 65 1.5E-14 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DA442_02685 8514785cb2ba826b0ac823b1d44108cd 283 PRINTS PR00108 Thymidylate synthase family signature 173 199 1.5E-14 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DA442_02685 8514785cb2ba826b0ac823b1d44108cd 283 PRINTS PR00108 Thymidylate synthase family signature 129 148 1.5E-14 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DA442_02685 8514785cb2ba826b0ac823b1d44108cd 283 Gene3D G3DSA:3.30.572.10 1 283 1.6E-81 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DA442_02685 8514785cb2ba826b0ac823b1d44108cd 283 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 283 5.6E-44 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DA442_02685 8514785cb2ba826b0ac823b1d44108cd 283 ProSitePatterns PS00091 Thymidylate synthase active site. 140 168 - T 14-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DA442_02685 8514785cb2ba826b0ac823b1d44108cd 283 Pfam PF00303 Thymidylate synthase 2 283 2.4E-75 T 14-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DA442_04720 72089a18485c95a9b8236bff4c46172d 411 Pfam PF00270 DEAD/DEAH box helicase 25 194 9.5E-48 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DA442_04720 72089a18485c95a9b8236bff4c46172d 411 Pfam PF00271 Helicase conserved C-terminal domain 233 338 9.0E-27 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_04720 72089a18485c95a9b8236bff4c46172d 411 SMART SM00490 257 338 1.4E-30 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_04720 72089a18485c95a9b8236bff4c46172d 411 Gene3D G3DSA:3.40.50.300 1 216 1.0E-72 T 14-10-2018 DA442_04720 72089a18485c95a9b8236bff4c46172d 411 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DA442_04720 72089a18485c95a9b8236bff4c46172d 411 SUPERFAMILY SSF52540 74 359 4.2E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_04720 72089a18485c95a9b8236bff4c46172d 411 SMART SM00487 20 221 4.9E-59 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DA442_04720 72089a18485c95a9b8236bff4c46172d 411 Gene3D G3DSA:3.40.50.300 217 372 1.2E-44 T 14-10-2018 DA442_00395 94f9217528520f07ca65a7072758c812 292 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 274 4.0E-71 T 14-10-2018 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 DA442_00395 94f9217528520f07ca65a7072758c812 292 Pfam PF00892 EamA-like transporter family 138 275 6.1E-7 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DA442_00395 94f9217528520f07ca65a7072758c812 292 SUPERFAMILY SSF103481 184 276 1.57E-5 T 14-10-2018 DA442_00395 94f9217528520f07ca65a7072758c812 292 SUPERFAMILY SSF103481 35 131 3.4E-5 T 14-10-2018 DA442_07895 f0ba6dbeb6afe6d5c52766c6eb767896 390 Gene3D G3DSA:3.40.50.2000 175 350 4.1E-20 T 14-10-2018 DA442_07895 f0ba6dbeb6afe6d5c52766c6eb767896 390 Gene3D G3DSA:3.40.50.2000 9 358 4.1E-20 T 14-10-2018 DA442_07895 f0ba6dbeb6afe6d5c52766c6eb767896 390 Pfam PF00534 Glycosyl transferases group 1 192 336 1.6E-12 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 DA442_07895 f0ba6dbeb6afe6d5c52766c6eb767896 390 SUPERFAMILY SSF53756 10 359 1.05E-28 T 14-10-2018 DA442_25360 7271aa8a05fbe8107045c10867cd8fff 247 Gene3D G3DSA:3.30.1150.10 142 246 3.1E-21 T 14-10-2018 DA442_25360 7271aa8a05fbe8107045c10867cd8fff 247 SUPERFAMILY SSF74653 167 243 8.63E-22 T 14-10-2018 DA442_25360 7271aa8a05fbe8107045c10867cd8fff 247 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 168 245 1.2E-21 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 DA442_25360 7271aa8a05fbe8107045c10867cd8fff 247 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 169 245 7.3E-22 T 14-10-2018 IPR006260 TonB/TolA, C-terminal DA442_12600 a52efa215b8e67ed09775c5dbe6423cc 190 Pfam PF03358 NADPH-dependent FMN reductase 13 135 3.6E-12 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 DA442_12600 a52efa215b8e67ed09775c5dbe6423cc 190 Gene3D G3DSA:3.40.50.360 1 190 8.9E-62 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DA442_12600 a52efa215b8e67ed09775c5dbe6423cc 190 SUPERFAMILY SSF52218 4 187 1.31E-55 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DA442_12600 a52efa215b8e67ed09775c5dbe6423cc 190 ProSitePatterns PS00201 Flavodoxin signature. 7 23 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 DA442_23005 bea74f2704ab1d5c0d2da1e85e1cd9b6 616 Pfam PF00664 ABC transporter transmembrane region 40 308 7.4E-17 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DA442_23005 bea74f2704ab1d5c0d2da1e85e1cd9b6 616 SMART SM00382 386 577 4.9E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_23005 bea74f2704ab1d5c0d2da1e85e1cd9b6 616 Gene3D G3DSA:3.40.50.300 351 605 3.1E-92 T 14-10-2018 DA442_23005 bea74f2704ab1d5c0d2da1e85e1cd9b6 616 SUPERFAMILY SSF52540 350 601 2.62E-89 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_23005 bea74f2704ab1d5c0d2da1e85e1cd9b6 616 Pfam PF00005 ABC transporter 378 531 2.9E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_23005 bea74f2704ab1d5c0d2da1e85e1cd9b6 616 SUPERFAMILY SSF90123 28 347 2.09E-52 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DA442_23005 bea74f2704ab1d5c0d2da1e85e1cd9b6 616 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_23005 bea74f2704ab1d5c0d2da1e85e1cd9b6 616 Gene3D G3DSA:1.20.1560.10 9 337 2.1E-26 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DA442_08970 2265391303603aa9a04af7b1aed745c5 344 Gene3D G3DSA:1.10.760.10 53 326 1.6E-113 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_08970 2265391303603aa9a04af7b1aed745c5 344 SUPERFAMILY SSF46626 41 190 1.3E-48 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_08970 2265391303603aa9a04af7b1aed745c5 344 Pfam PF00034 Cytochrome c 210 320 5.3E-11 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_08970 2265391303603aa9a04af7b1aed745c5 344 PIRSF PIRSF000294 16 344 2.2E-125 T 14-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 DA442_08970 2265391303603aa9a04af7b1aed745c5 344 SUPERFAMILY SSF46626 189 341 6.77E-43 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_08970 2265391303603aa9a04af7b1aed745c5 344 Pfam PF03150 Di-haem cytochrome c peroxidase 55 202 9.4E-50 T 14-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 DA442_08970 2265391303603aa9a04af7b1aed745c5 344 Gene3D G3DSA:1.10.760.10 55 202 1.6E-113 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_00020 d5ffb1789493e61d02f6e707659f0420 805 SUPERFAMILY SSF54211 221 393 1.1E-58 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DA442_00020 d5ffb1789493e61d02f6e707659f0420 805 Gene3D G3DSA:3.10.20.690 593 684 5.6E-35 T 14-10-2018 DA442_00020 d5ffb1789493e61d02f6e707659f0420 805 SMART SM00433 35 798 1.5E-273 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DA442_00020 d5ffb1789493e61d02f6e707659f0420 805 Pfam PF01751 Toprim domain 420 532 8.5E-19 T 14-10-2018 IPR006171 TOPRIM domain DA442_00020 d5ffb1789493e61d02f6e707659f0420 805 SUPERFAMILY SSF56719 395 796 1.07E-87 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DA442_00020 d5ffb1789493e61d02f6e707659f0420 805 PRINTS PR01159 DNA gyrase subunit B signature 313 329 2.3E-85 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DA442_00020 d5ffb1789493e61d02f6e707659f0420 805 PRINTS PR01159 DNA gyrase subunit B signature 195 208 2.3E-85 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DA442_00020 d5ffb1789493e61d02f6e707659f0420 805 PRINTS PR01159 DNA gyrase subunit B signature 5 15 2.3E-85 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DA442_00020 d5ffb1789493e61d02f6e707659f0420 805 PRINTS PR01159 DNA gyrase subunit B signature 180 195 2.3E-85 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DA442_00020 d5ffb1789493e61d02f6e707659f0420 805 PRINTS PR01159 DNA gyrase subunit B signature 471 480 2.3E-85 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DA442_00020 d5ffb1789493e61d02f6e707659f0420 805 PRINTS PR01159 DNA gyrase subunit B signature 758 770 2.3E-85 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DA442_00020 d5ffb1789493e61d02f6e707659f0420 805 PRINTS PR01159 DNA gyrase subunit B signature 361 375 2.3E-85 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DA442_00020 d5ffb1789493e61d02f6e707659f0420 805 PRINTS PR01159 DNA gyrase subunit B signature 774 790 2.3E-85 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DA442_00020 d5ffb1789493e61d02f6e707659f0420 805 PRINTS PR01159 DNA gyrase subunit B signature 220 242 2.3E-85 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DA442_00020 d5ffb1789493e61d02f6e707659f0420 805 PRINTS PR01159 DNA gyrase subunit B signature 375 395 2.3E-85 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DA442_00020 d5ffb1789493e61d02f6e707659f0420 805 PRINTS PR01159 DNA gyrase subunit B signature 243 261 2.3E-85 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DA442_00020 d5ffb1789493e61d02f6e707659f0420 805 Gene3D G3DSA:3.40.50.670 399 572 1.3E-75 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DA442_00020 d5ffb1789493e61d02f6e707659f0420 805 Gene3D G3DSA:3.40.50.670 707 804 3.1E-26 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DA442_00020 d5ffb1789493e61d02f6e707659f0420 805 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 805 0.0 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DA442_00020 d5ffb1789493e61d02f6e707659f0420 805 Gene3D G3DSA:3.30.565.10 1 220 1.9E-95 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_00020 d5ffb1789493e61d02f6e707659f0420 805 PRINTS PR00418 DNA topoisomerase II family signature 526 538 5.9E-70 T 14-10-2018 DA442_00020 d5ffb1789493e61d02f6e707659f0420 805 PRINTS PR00418 DNA topoisomerase II family signature 269 282 5.9E-70 T 14-10-2018 DA442_00020 d5ffb1789493e61d02f6e707659f0420 805 PRINTS PR00418 DNA topoisomerase II family signature 70 83 5.9E-70 T 14-10-2018 DA442_00020 d5ffb1789493e61d02f6e707659f0420 805 PRINTS PR00418 DNA topoisomerase II family signature 35 50 5.9E-70 T 14-10-2018 DA442_00020 d5ffb1789493e61d02f6e707659f0420 805 PRINTS PR00418 DNA topoisomerase II family signature 113 127 5.9E-70 T 14-10-2018 DA442_00020 d5ffb1789493e61d02f6e707659f0420 805 PRINTS PR00418 DNA topoisomerase II family signature 488 504 5.9E-70 T 14-10-2018 DA442_00020 d5ffb1789493e61d02f6e707659f0420 805 PRINTS PR00418 DNA topoisomerase II family signature 506 523 5.9E-70 T 14-10-2018 DA442_00020 d5ffb1789493e61d02f6e707659f0420 805 PRINTS PR00418 DNA topoisomerase II family signature 421 435 5.9E-70 T 14-10-2018 DA442_00020 d5ffb1789493e61d02f6e707659f0420 805 PRINTS PR00418 DNA topoisomerase II family signature 737 753 5.9E-70 T 14-10-2018 DA442_00020 d5ffb1789493e61d02f6e707659f0420 805 ProSitePatterns PS00177 DNA topoisomerase II signature. 423 431 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DA442_00020 d5ffb1789493e61d02f6e707659f0420 805 SMART SM00387 31 175 2.9E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_00020 d5ffb1789493e61d02f6e707659f0420 805 SUPERFAMILY SSF55874 4 212 2.88E-75 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_00020 d5ffb1789493e61d02f6e707659f0420 805 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 805 107.795 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DA442_00020 d5ffb1789493e61d02f6e707659f0420 805 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 736 794 1.9E-29 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 DA442_00020 d5ffb1789493e61d02f6e707659f0420 805 Pfam PF00204 DNA gyrase B 221 391 8.9E-60 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DA442_00020 d5ffb1789493e61d02f6e707659f0420 805 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 173 1.3E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_00020 d5ffb1789493e61d02f6e707659f0420 805 Gene3D G3DSA:3.30.230.10 221 393 2.0E-72 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DA442_11305 e294d42b1b658dc821fda617990c674f 203 Pfam PF00034 Cytochrome c 133 201 2.0E-6 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_11305 e294d42b1b658dc821fda617990c674f 203 Gene3D G3DSA:1.10.760.10 118 201 2.3E-23 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_11305 e294d42b1b658dc821fda617990c674f 203 Gene3D G3DSA:1.10.760.10 26 96 5.4E-18 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_11305 e294d42b1b658dc821fda617990c674f 203 SUPERFAMILY SSF46626 120 201 2.62E-20 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_11305 e294d42b1b658dc821fda617990c674f 203 PIRSF PIRSF000005 1 203 1.0E-62 T 14-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 DA442_11305 e294d42b1b658dc821fda617990c674f 203 SUPERFAMILY SSF46626 27 96 3.26E-14 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_02825 1b6c3f9cbf74da0f0d201165bda1306e 648 Pfam PF01464 Transglycosylase SLT domain 489 600 1.2E-28 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 DA442_02825 1b6c3f9cbf74da0f0d201165bda1306e 648 Gene3D G3DSA:1.10.1240.20 410 476 6.9E-21 T 14-10-2018 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily GO:0004553|GO:0042597 DA442_02825 1b6c3f9cbf74da0f0d201165bda1306e 648 Gene3D G3DSA:1.10.530.10 477 648 2.0E-49 T 14-10-2018 DA442_02825 1b6c3f9cbf74da0f0d201165bda1306e 648 Gene3D G3DSA:1.25.20.10 33 394 6.2E-101 T 14-10-2018 DA442_02825 1b6c3f9cbf74da0f0d201165bda1306e 648 SUPERFAMILY SSF48435 33 481 1.83E-127 T 14-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 DA442_02825 1b6c3f9cbf74da0f0d201165bda1306e 648 SUPERFAMILY SSF53955 484 643 9.76E-48 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily DA442_02825 1b6c3f9cbf74da0f0d201165bda1306e 648 Pfam PF14718 Soluble lytic murein transglycosylase L domain 411 476 1.6E-24 T 14-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 DA442_16220 9fb7805253f42f75dd18b140cf62180b 320 Gene3D G3DSA:3.40.50.460 143 252 1.2E-116 T 14-10-2018 DA442_16220 9fb7805253f42f75dd18b140cf62180b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 9.4E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DA442_16220 9fb7805253f42f75dd18b140cf62180b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 9.4E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DA442_16220 9fb7805253f42f75dd18b140cf62180b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 9.4E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DA442_16220 9fb7805253f42f75dd18b140cf62180b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 9.4E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DA442_16220 9fb7805253f42f75dd18b140cf62180b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 9.4E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DA442_16220 9fb7805253f42f75dd18b140cf62180b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 9.4E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DA442_16220 9fb7805253f42f75dd18b140cf62180b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 9.4E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DA442_16220 9fb7805253f42f75dd18b140cf62180b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 9.4E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DA442_16220 9fb7805253f42f75dd18b140cf62180b 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 9.4E-83 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DA442_16220 9fb7805253f42f75dd18b140cf62180b 320 SUPERFAMILY SSF53784 3 310 4.45E-112 T 14-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DA442_16220 9fb7805253f42f75dd18b140cf62180b 320 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 301 2.1E-129 T 14-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 DA442_16220 9fb7805253f42f75dd18b140cf62180b 320 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 320 47.319 T 14-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 DA442_16220 9fb7805253f42f75dd18b140cf62180b 320 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 14-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DA442_16220 9fb7805253f42f75dd18b140cf62180b 320 Pfam PF00365 Phosphofructokinase 4 276 8.6E-109 T 14-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DA442_16220 9fb7805253f42f75dd18b140cf62180b 320 PIRSF PIRSF000532 1 320 2.2E-127 T 14-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 DA442_16220 9fb7805253f42f75dd18b140cf62180b 320 Gene3D G3DSA:3.40.50.450 4 287 1.2E-116 T 14-10-2018 DA442_19010 8aba1d0bc1c6d48f1b96d32e46254704 422 Pfam PF02954 Bacterial regulatory protein, Fis family 372 412 3.9E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DA442_19010 8aba1d0bc1c6d48f1b96d32e46254704 422 SUPERFAMILY SSF46689 362 415 3.12E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_19010 8aba1d0bc1c6d48f1b96d32e46254704 422 Pfam PF14532 Sigma-54 interaction domain 143 289 2.3E-14 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DA442_19010 8aba1d0bc1c6d48f1b96d32e46254704 422 SMART SM00448 6 117 4.2E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_19010 8aba1d0bc1c6d48f1b96d32e46254704 422 Pfam PF00072 Response regulator receiver domain 8 117 1.6E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_19010 8aba1d0bc1c6d48f1b96d32e46254704 422 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 331 340 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site DA442_19010 8aba1d0bc1c6d48f1b96d32e46254704 422 Gene3D G3DSA:3.40.50.2300 2 131 1.0E-33 T 14-10-2018 DA442_19010 8aba1d0bc1c6d48f1b96d32e46254704 422 SUPERFAMILY SSF52172 4 184 1.71E-35 T 14-10-2018 IPR011006 CheY-like superfamily DA442_19010 8aba1d0bc1c6d48f1b96d32e46254704 422 Gene3D G3DSA:1.10.8.60 289 351 5.0E-16 T 14-10-2018 DA442_19010 8aba1d0bc1c6d48f1b96d32e46254704 422 SUPERFAMILY SSF52540 142 347 3.44E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_19010 8aba1d0bc1c6d48f1b96d32e46254704 422 Gene3D G3DSA:1.10.10.60 355 416 1.6E-12 T 14-10-2018 DA442_19010 8aba1d0bc1c6d48f1b96d32e46254704 422 Gene3D G3DSA:3.40.50.300 141 288 5.2E-25 T 14-10-2018 DA442_04270 7b17731b1a322ead51c2e865b9d5288f 116 SMART SM00938 6 104 7.6E-6 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 DA442_04270 7b17731b1a322ead51c2e865b9d5288f 116 Gene3D G3DSA:3.30.70.120 1 104 1.3E-14 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DA442_04270 7b17731b1a322ead51c2e865b9d5288f 116 SUPERFAMILY SSF54913 1 102 1.11E-21 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta DA442_08635 f9c5810b1a1f8bb7a2e4df1950d59765 138 SUPERFAMILY SSF51316 7 127 7.01E-32 T 14-10-2018 IPR011057 Mss4-like superfamily DA442_08635 f9c5810b1a1f8bb7a2e4df1950d59765 138 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 28 110 2.8E-14 T 14-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 DA442_08635 f9c5810b1a1f8bb7a2e4df1950d59765 138 Gene3D G3DSA:2.170.150.70 7 113 7.5E-13 T 14-10-2018 DA442_04180 0f1dc1b3fb5c270b4595c424437b7b6b 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 14-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site DA442_04180 0f1dc1b3fb5c270b4595c424437b7b6b 85 Gene3D G3DSA:3.30.1340.10 1 85 8.4E-32 T 14-10-2018 IPR035895 HPr-like superfamily DA442_04180 0f1dc1b3fb5c270b4595c424437b7b6b 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site DA442_04180 0f1dc1b3fb5c270b4595c424437b7b6b 85 SUPERFAMILY SSF55594 1 82 1.96E-26 T 14-10-2018 IPR035895 HPr-like superfamily DA442_04180 0f1dc1b3fb5c270b4595c424437b7b6b 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 9.7E-27 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DA442_04180 0f1dc1b3fb5c270b4595c424437b7b6b 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 3.6E-27 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DA442_04180 0f1dc1b3fb5c270b4595c424437b7b6b 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 9.6E-18 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DA442_04180 0f1dc1b3fb5c270b4595c424437b7b6b 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 9.6E-18 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DA442_04180 0f1dc1b3fb5c270b4595c424437b7b6b 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 9.6E-18 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DA442_25100 a088d8754f05e6539e9c5c5da9bc6899 418 Pfam PF00709 Adenylosuccinate synthetase 4 416 6.5E-130 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DA442_25100 a088d8754f05e6539e9c5c5da9bc6899 418 Gene3D G3DSA:3.40.440.10 6 255 2.4E-72 T 14-10-2018 DA442_25100 a088d8754f05e6539e9c5c5da9bc6899 418 Gene3D G3DSA:1.10.300.10 99 200 2.4E-72 T 14-10-2018 DA442_25100 a088d8754f05e6539e9c5c5da9bc6899 418 Gene3D G3DSA:3.90.170.10 266 418 7.9E-50 T 14-10-2018 DA442_25100 a088d8754f05e6539e9c5c5da9bc6899 418 SUPERFAMILY SSF52540 1 417 1.91E-121 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_25100 a088d8754f05e6539e9c5c5da9bc6899 418 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 418 141.902 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DA442_25100 a088d8754f05e6539e9c5c5da9bc6899 418 SMART SM00788 3 417 2.5E-173 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DA442_24130 b87b7146865661dcb40d977b8ccc8201 690 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 577 686 1.3E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_24130 b87b7146865661dcb40d977b8ccc8201 690 PRINTS PR00344 Bacterial sensor protein C-terminal signature 671 684 1.4E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_24130 b87b7146865661dcb40d977b8ccc8201 690 PRINTS PR00344 Bacterial sensor protein C-terminal signature 616 630 1.4E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_24130 b87b7146865661dcb40d977b8ccc8201 690 PRINTS PR00344 Bacterial sensor protein C-terminal signature 634 644 1.4E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_24130 b87b7146865661dcb40d977b8ccc8201 690 PRINTS PR00344 Bacterial sensor protein C-terminal signature 647 665 1.4E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_24130 b87b7146865661dcb40d977b8ccc8201 690 SUPERFAMILY SSF55874 539 683 1.7E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_24130 b87b7146865661dcb40d977b8ccc8201 690 Pfam PF13426 PAS domain 324 427 3.8E-6 T 14-10-2018 IPR000014 PAS domain DA442_24130 b87b7146865661dcb40d977b8ccc8201 690 Gene3D G3DSA:3.30.450.20 59 174 2.1E-11 T 14-10-2018 DA442_24130 b87b7146865661dcb40d977b8ccc8201 690 SMART SM00387 577 685 5.6E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_24130 b87b7146865661dcb40d977b8ccc8201 690 Gene3D G3DSA:3.30.450.20 299 426 1.5E-12 T 14-10-2018 DA442_24130 b87b7146865661dcb40d977b8ccc8201 690 PIRSF PIRSF036431 1 690 3.6E-141 T 14-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) DA442_24130 b87b7146865661dcb40d977b8ccc8201 690 Gene3D G3DSA:3.30.565.10 537 689 1.1E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_24130 b87b7146865661dcb40d977b8ccc8201 690 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 309 436 3.2E-13 T 14-10-2018 IPR000014 PAS domain DA442_24130 b87b7146865661dcb40d977b8ccc8201 690 SMART SM00086 389 429 0.004 T 14-10-2018 IPR001610 PAC motif DA442_24130 b87b7146865661dcb40d977b8ccc8201 690 Gene3D G3DSA:1.10.287.130 445 532 1.9E-13 T 14-10-2018 DA442_24130 b87b7146865661dcb40d977b8ccc8201 690 SUPERFAMILY SSF55785 301 427 6.47E-12 T 14-10-2018 IPR035965 PAS domain superfamily DA442_24130 b87b7146865661dcb40d977b8ccc8201 690 SUPERFAMILY SSF47384 452 532 1.22E-6 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DA442_02115 6fbb8bf7901dd24093636a555ac906d0 203 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 2 194 3.8E-73 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DA442_02115 6fbb8bf7901dd24093636a555ac906d0 203 Pfam PF02660 Glycerol-3-phosphate acyltransferase 12 184 1.6E-49 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DA442_02115 6fbb8bf7901dd24093636a555ac906d0 203 SMART SM01207 10 185 1.5E-82 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DA442_02115 6fbb8bf7901dd24093636a555ac906d0 203 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 18.834 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DA442_03230 59eb9446007197f5cddbf8245dfd4afa 418 Gene3D G3DSA:3.30.9.10 134 362 4.4E-54 T 14-10-2018 DA442_03230 59eb9446007197f5cddbf8245dfd4afa 418 Pfam PF01266 FAD dependent oxidoreductase 3 397 4.2E-72 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DA442_03230 59eb9446007197f5cddbf8245dfd4afa 418 Gene3D G3DSA:3.50.50.60 93 404 4.4E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_03230 59eb9446007197f5cddbf8245dfd4afa 418 Gene3D G3DSA:3.50.50.60 3 62 2.6E-10 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_03230 59eb9446007197f5cddbf8245dfd4afa 418 SUPERFAMILY SSF51905 1 416 4.79E-53 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_03230 59eb9446007197f5cddbf8245dfd4afa 418 SUPERFAMILY SSF54373 270 360 1.29E-17 T 14-10-2018 DA442_04590 452c11e84d918582aee633828279e916 399 Pfam PF07670 Nucleoside recognition 87 182 2.0E-6 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 DA442_04590 452c11e84d918582aee633828279e916 399 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 1 395 1.6E-133 T 14-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 DA442_04590 452c11e84d918582aee633828279e916 399 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 5 78 2.4E-26 T 14-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 DA442_04590 452c11e84d918582aee633828279e916 399 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 189 396 1.4E-70 T 14-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 DA442_06305 b2b789bbc50a684f75cd6e23e1842e50 208 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 54 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DA442_06305 b2b789bbc50a684f75cd6e23e1842e50 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.4E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DA442_06305 b2b789bbc50a684f75cd6e23e1842e50 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.4E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DA442_06305 b2b789bbc50a684f75cd6e23e1842e50 208 SUPERFAMILY SSF46689 3 75 1.8E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_06305 b2b789bbc50a684f75cd6e23e1842e50 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 1.1E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DA442_06305 b2b789bbc50a684f75cd6e23e1842e50 208 Gene3D G3DSA:1.10.357.10 2 208 2.5E-53 T 14-10-2018 DA442_06305 b2b789bbc50a684f75cd6e23e1842e50 208 SUPERFAMILY SSF48498 80 207 6.23E-40 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DA442_18785 f8b8b146414f8256627d496aba3b56cc 109 Pfam PF07119 Protein of unknown function (DUF1375) 15 85 1.7E-13 T 14-10-2018 IPR010780 Protein of unknown function DUF1375 DA442_10445 dcd3f0951e4c31a6df8d23508346fff6 97 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 16 67 2.6E-13 T 14-10-2018 DA442_10445 dcd3f0951e4c31a6df8d23508346fff6 97 SUPERFAMILY SSF143120 14 85 3.14E-17 T 14-10-2018 IPR036165 YefM-like superfamily DA442_10445 dcd3f0951e4c31a6df8d23508346fff6 97 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 14 78 5.2E-17 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM DA442_10445 dcd3f0951e4c31a6df8d23508346fff6 97 Gene3D G3DSA:3.40.1620.40 16 78 7.6E-11 T 14-10-2018 DA442_09585 dcd3f0951e4c31a6df8d23508346fff6 97 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 16 67 2.6E-13 T 14-10-2018 DA442_09585 dcd3f0951e4c31a6df8d23508346fff6 97 SUPERFAMILY SSF143120 14 85 3.14E-17 T 14-10-2018 IPR036165 YefM-like superfamily DA442_09585 dcd3f0951e4c31a6df8d23508346fff6 97 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 14 78 5.2E-17 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM DA442_09585 dcd3f0951e4c31a6df8d23508346fff6 97 Gene3D G3DSA:3.40.1620.40 16 78 7.6E-11 T 14-10-2018 DA442_15600 cf4c3d85e1782a897c66fcb5b71d90ff 366 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 14 359 1.1E-119 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 DA442_15600 cf4c3d85e1782a897c66fcb5b71d90ff 366 SUPERFAMILY SSF56796 4 360 4.45E-117 T 14-10-2018 DA442_15600 cf4c3d85e1782a897c66fcb5b71d90ff 366 Gene3D G3DSA:3.40.50.1970 1 176 9.1E-65 T 14-10-2018 DA442_15600 cf4c3d85e1782a897c66fcb5b71d90ff 366 PIRSF PIRSF001455 22 365 2.2E-106 T 14-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 DA442_15600 cf4c3d85e1782a897c66fcb5b71d90ff 366 Pfam PF01761 3-dehydroquinate synthase 72 329 2.6E-110 T 14-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 DA442_15600 cf4c3d85e1782a897c66fcb5b71d90ff 366 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 360 74.893 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 DA442_15600 cf4c3d85e1782a897c66fcb5b71d90ff 366 Gene3D G3DSA:1.20.1090.10 177 366 4.1E-70 T 14-10-2018 DA442_11650 8df5ca0868b481c55501cd48754a1e87 321 Pfam PF04392 ABC transporter substrate binding protein 29 320 8.0E-111 T 14-10-2018 IPR007487 ABC transporter, substrate-binding protein DA442_11650 8df5ca0868b481c55501cd48754a1e87 321 Gene3D G3DSA:3.40.50.2300 143 314 1.7E-100 T 14-10-2018 DA442_11650 8df5ca0868b481c55501cd48754a1e87 321 SUPERFAMILY SSF53822 43 279 1.39E-17 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DA442_11650 8df5ca0868b481c55501cd48754a1e87 321 Gene3D G3DSA:3.40.50.2300 46 292 1.7E-100 T 14-10-2018 DA442_01565 45e07e0fc322f04f4c4eb80463e07e41 206 SUPERFAMILY SSF54534 7 205 2.75E-54 T 14-10-2018 DA442_01565 45e07e0fc322f04f4c4eb80463e07e41 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 3 108 3.8E-24 T 14-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 DA442_01565 45e07e0fc322f04f4c4eb80463e07e41 206 Gene3D G3DSA:1.10.287.460 4 67 1.9E-19 T 14-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 DA442_01565 45e07e0fc322f04f4c4eb80463e07e41 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 117 203 2.2E-26 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DA442_01565 45e07e0fc322f04f4c4eb80463e07e41 206 Gene3D G3DSA:3.10.50.40 68 206 8.2E-50 T 14-10-2018 DA442_14085 cf904b80397f3b791961958947e576d4 337 Pfam PF13343 Bacterial extracellular solute-binding protein 72 299 8.3E-20 T 14-10-2018 DA442_14085 cf904b80397f3b791961958947e576d4 337 SUPERFAMILY SSF53850 24 332 1.23E-76 T 14-10-2018 DA442_14085 cf904b80397f3b791961958947e576d4 337 PIRSF PIRSF002825 1 337 4.7E-102 T 14-10-2018 IPR026045 Ferric binding protein DA442_14085 cf904b80397f3b791961958947e576d4 337 Gene3D G3DSA:3.40.190.10 25 297 1.0E-126 T 14-10-2018 DA442_14085 cf904b80397f3b791961958947e576d4 337 Gene3D G3DSA:3.40.190.10 120 328 1.0E-126 T 14-10-2018 DA442_17845 cf7cd1c4f666271ccdfe5a76335af397 430 Pfam PF00270 DEAD/DEAH box helicase 25 193 7.9E-52 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DA442_17845 cf7cd1c4f666271ccdfe5a76335af397 430 Gene3D G3DSA:3.40.50.300 1 220 7.8E-75 T 14-10-2018 DA442_17845 cf7cd1c4f666271ccdfe5a76335af397 430 Gene3D G3DSA:3.40.50.300 221 423 1.4E-48 T 14-10-2018 DA442_17845 cf7cd1c4f666271ccdfe5a76335af397 430 SMART SM00490 258 339 5.5E-31 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_17845 cf7cd1c4f666271ccdfe5a76335af397 430 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DA442_17845 cf7cd1c4f666271ccdfe5a76335af397 430 SUPERFAMILY SSF52540 75 356 4.85E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_17845 cf7cd1c4f666271ccdfe5a76335af397 430 Pfam PF00271 Helicase conserved C-terminal domain 231 339 2.9E-29 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_17845 cf7cd1c4f666271ccdfe5a76335af397 430 SMART SM00487 20 229 6.4E-57 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DA442_07815 a81722126610d3bd30b2834c708e95b0 203 Gene3D G3DSA:1.10.3480.10 2 199 8.4E-45 T 14-10-2018 DA442_07815 a81722126610d3bd30b2834c708e95b0 203 PIRSF PIRSF004690 2 198 1.7E-35 T 14-10-2018 IPR026269 Tat proofreading chaperone DmsD-type DA442_07815 a81722126610d3bd30b2834c708e95b0 203 Pfam PF02613 Nitrate reductase delta subunit 40 157 8.7E-27 T 14-10-2018 IPR020945 DMSO/Nitrate reductase chaperone DA442_07815 a81722126610d3bd30b2834c708e95b0 203 SUPERFAMILY SSF89155 5 198 3.66E-49 T 14-10-2018 IPR036411 TorD-like superfamily DA442_22675 4d0575951989389d9c2aba7ddfd6adf6 628 Gene3D G3DSA:3.30.450.20 66 171 1.7E-29 T 14-10-2018 DA442_22675 4d0575951989389d9c2aba7ddfd6adf6 628 SUPERFAMILY SSF58104 318 627 2.22E-77 T 14-10-2018 DA442_22675 4d0575951989389d9c2aba7ddfd6adf6 628 Pfam PF02743 Cache domain 40 257 3.9E-24 T 14-10-2018 IPR033479 Double Cache domain 1 DA442_22675 4d0575951989389d9c2aba7ddfd6adf6 628 SMART SM00304 296 350 2.7E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_22675 4d0575951989389d9c2aba7ddfd6adf6 628 Gene3D G3DSA:1.10.287.950 296 628 1.9E-75 T 14-10-2018 DA442_22675 4d0575951989389d9c2aba7ddfd6adf6 628 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 429 594 1.4E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_22675 4d0575951989389d9c2aba7ddfd6adf6 628 Pfam PF00672 HAMP domain 300 347 8.6E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_22675 4d0575951989389d9c2aba7ddfd6adf6 628 Gene3D G3DSA:3.30.450.20 53 269 1.7E-29 T 14-10-2018 DA442_22675 4d0575951989389d9c2aba7ddfd6adf6 628 SMART SM00283 365 626 1.1E-73 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_14455 05fd66ca045f300a387e3c8686a56332 307 Gene3D G3DSA:3.10.350.10 34 100 3.2E-12 T 14-10-2018 IPR036779 LysM domain superfamily DA442_14455 05fd66ca045f300a387e3c8686a56332 307 SMART SM00257 48 92 1.5E-11 T 14-10-2018 IPR018392 LysM domain DA442_14455 05fd66ca045f300a387e3c8686a56332 307 Pfam PF01476 LysM domain 49 91 5.2E-12 T 14-10-2018 IPR018392 LysM domain DA442_14455 05fd66ca045f300a387e3c8686a56332 307 Pfam PF01551 Peptidase family M23 208 302 5.7E-31 T 14-10-2018 IPR016047 Peptidase M23 DA442_14455 05fd66ca045f300a387e3c8686a56332 307 SUPERFAMILY SSF51261 48 306 2.82E-52 T 14-10-2018 IPR011055 Duplicated hybrid motif DA442_14455 05fd66ca045f300a387e3c8686a56332 307 Gene3D G3DSA:2.70.70.10 129 307 9.5E-38 T 14-10-2018 IPR011055 Duplicated hybrid motif DA442_22120 a29acf9e83b09698149ee3bc33bedee1 584 PRINTS PR01009 Flagellar M-ring protein signature 143 161 4.0E-26 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DA442_22120 a29acf9e83b09698149ee3bc33bedee1 584 PRINTS PR01009 Flagellar M-ring protein signature 219 237 4.0E-26 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DA442_22120 a29acf9e83b09698149ee3bc33bedee1 584 PRINTS PR01009 Flagellar M-ring protein signature 361 385 4.0E-26 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DA442_22120 a29acf9e83b09698149ee3bc33bedee1 584 PRINTS PR01009 Flagellar M-ring protein signature 290 308 4.0E-26 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DA442_22120 a29acf9e83b09698149ee3bc33bedee1 584 PRINTS PR01009 Flagellar M-ring protein signature 175 189 4.0E-26 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DA442_22120 a29acf9e83b09698149ee3bc33bedee1 584 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 42 573 3.2E-72 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DA442_22120 a29acf9e83b09698149ee3bc33bedee1 584 Pfam PF01514 Secretory protein of YscJ/FliF family 52 243 4.7E-63 T 14-10-2018 IPR006182 Secretory protein YscJ/FliF DA442_22120 a29acf9e83b09698149ee3bc33bedee1 584 Pfam PF08345 Flagellar M-ring protein C-terminal 277 431 5.1E-39 T 14-10-2018 IPR013556 Flagellar M-ring C-terminal DA442_22120 a29acf9e83b09698149ee3bc33bedee1 584 Gene3D G3DSA:3.30.300.30 141 243 6.5E-12 T 14-10-2018 DA442_22120 a29acf9e83b09698149ee3bc33bedee1 584 PIRSF PIRSF004862 24 575 3.5E-128 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DA442_00705 ff4e27b5594a46ee5ce40fcaeb3ab0de 405 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 402 1.5E-153 T 14-10-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 DA442_00705 ff4e27b5594a46ee5ce40fcaeb3ab0de 405 Gene3D G3DSA:1.20.81.30 55 172 1.0E-37 T 14-10-2018 DA442_00705 ff4e27b5594a46ee5ce40fcaeb3ab0de 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 368 382 7.3E-37 T 14-10-2018 IPR003004 GspF/PilC family DA442_00705 ff4e27b5594a46ee5ce40fcaeb3ab0de 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 384 403 7.3E-37 T 14-10-2018 IPR003004 GspF/PilC family DA442_00705 ff4e27b5594a46ee5ce40fcaeb3ab0de 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 165 193 7.3E-37 T 14-10-2018 IPR003004 GspF/PilC family DA442_00705 ff4e27b5594a46ee5ce40fcaeb3ab0de 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 66 78 7.3E-37 T 14-10-2018 IPR003004 GspF/PilC family DA442_00705 ff4e27b5594a46ee5ce40fcaeb3ab0de 405 Pfam PF00482 Type II secretion system (T2SS), protein F 273 395 1.8E-24 T 14-10-2018 IPR018076 Type II secretion system F domain DA442_00705 ff4e27b5594a46ee5ce40fcaeb3ab0de 405 Pfam PF00482 Type II secretion system (T2SS), protein F 71 193 1.1E-34 T 14-10-2018 IPR018076 Type II secretion system F domain DA442_00705 ff4e27b5594a46ee5ce40fcaeb3ab0de 405 Gene3D G3DSA:1.20.81.30 256 368 1.8E-25 T 14-10-2018 DA442_00705 ff4e27b5594a46ee5ce40fcaeb3ab0de 405 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 165 193 - T 14-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 DA442_01580 440b7552ea167ede42854c0b1e037308 459 Pfam PF00271 Helicase conserved C-terminal domain 231 338 8.8E-27 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_01580 440b7552ea167ede42854c0b1e037308 459 SMART SM00490 257 338 1.0E-26 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_01580 440b7552ea167ede42854c0b1e037308 459 Pfam PF00270 DEAD/DEAH box helicase 28 195 4.9E-48 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DA442_01580 440b7552ea167ede42854c0b1e037308 459 Gene3D G3DSA:3.40.50.300 210 371 3.2E-44 T 14-10-2018 DA442_01580 440b7552ea167ede42854c0b1e037308 459 Gene3D G3DSA:3.30.70.330 385 458 3.0E-17 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily DA442_01580 440b7552ea167ede42854c0b1e037308 459 SMART SM00487 23 225 2.8E-57 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DA442_01580 440b7552ea167ede42854c0b1e037308 459 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DA442_01580 440b7552ea167ede42854c0b1e037308 459 Gene3D G3DSA:3.40.50.300 2 209 1.5E-75 T 14-10-2018 DA442_01580 440b7552ea167ede42854c0b1e037308 459 SUPERFAMILY SSF52540 73 357 1.87E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_01580 440b7552ea167ede42854c0b1e037308 459 Pfam PF03880 DbpA RNA binding domain 386 456 4.4E-21 T 14-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain DA442_20475 0787f1aefc2920154bf42cb1076d42d5 392 ProSitePatterns PS00099 Thiolases active site. 373 386 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 DA442_20475 0787f1aefc2920154bf42cb1076d42d5 392 Gene3D G3DSA:3.40.47.10 7 275 1.6E-143 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DA442_20475 0787f1aefc2920154bf42cb1076d42d5 392 Pfam PF00108 Thiolase, N-terminal domain 6 260 1.3E-85 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 DA442_20475 0787f1aefc2920154bf42cb1076d42d5 392 PIRSF PIRSF000429 1 392 1.1E-113 T 14-10-2018 IPR002155 Thiolase GO:0016747 DA442_20475 0787f1aefc2920154bf42cb1076d42d5 392 Pfam PF02803 Thiolase, C-terminal domain 270 390 2.0E-44 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 DA442_20475 0787f1aefc2920154bf42cb1076d42d5 392 SUPERFAMILY SSF53901 270 390 2.92E-40 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DA442_20475 0787f1aefc2920154bf42cb1076d42d5 392 SUPERFAMILY SSF53901 5 268 2.88E-76 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DA442_20475 0787f1aefc2920154bf42cb1076d42d5 392 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 85 103 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 DA442_20475 0787f1aefc2920154bf42cb1076d42d5 392 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 390 2.6E-132 T 14-10-2018 IPR002155 Thiolase GO:0016747 DA442_20475 0787f1aefc2920154bf42cb1076d42d5 392 Gene3D G3DSA:3.40.47.10 127 389 1.6E-143 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DA442_11660 f0bbc3b14eb171a0dc8f7434e4484968 398 Pfam PF00871 Acetokinase family 5 390 1.5E-168 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DA442_11660 f0bbc3b14eb171a0dc8f7434e4484968 398 Hamap MF_00020 Acetate kinase [ackA]. 1 398 191.054 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DA442_11660 f0bbc3b14eb171a0dc8f7434e4484968 398 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 3.1E-174 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DA442_11660 f0bbc3b14eb171a0dc8f7434e4484968 398 PRINTS PR00471 Acetate kinase family signature 172 185 2.5E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DA442_11660 f0bbc3b14eb171a0dc8f7434e4484968 398 PRINTS PR00471 Acetate kinase family signature 377 389 2.5E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DA442_11660 f0bbc3b14eb171a0dc8f7434e4484968 398 PRINTS PR00471 Acetate kinase family signature 298 311 2.5E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DA442_11660 f0bbc3b14eb171a0dc8f7434e4484968 398 PRINTS PR00471 Acetate kinase family signature 321 337 2.5E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DA442_11660 f0bbc3b14eb171a0dc8f7434e4484968 398 PRINTS PR00471 Acetate kinase family signature 202 223 2.5E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DA442_11660 f0bbc3b14eb171a0dc8f7434e4484968 398 PRINTS PR00471 Acetate kinase family signature 5 16 2.5E-45 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DA442_11660 f0bbc3b14eb171a0dc8f7434e4484968 398 Gene3D G3DSA:3.30.420.40 2 194 2.7E-75 T 14-10-2018 DA442_11660 f0bbc3b14eb171a0dc8f7434e4484968 398 SUPERFAMILY SSF53067 3 195 7.77E-66 T 14-10-2018 DA442_11660 f0bbc3b14eb171a0dc8f7434e4484968 398 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DA442_11660 f0bbc3b14eb171a0dc8f7434e4484968 398 PIRSF PIRSF000722 1 397 8.4E-149 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DA442_11660 f0bbc3b14eb171a0dc8f7434e4484968 398 Gene3D G3DSA:3.30.420.40 195 397 4.2E-83 T 14-10-2018 DA442_11660 f0bbc3b14eb171a0dc8f7434e4484968 398 SUPERFAMILY SSF53067 156 395 1.76E-85 T 14-10-2018 DA442_11660 f0bbc3b14eb171a0dc8f7434e4484968 398 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DA442_25050 9fdb94d35ddf0d07dce8d89811dfc65a 293 Gene3D G3DSA:1.10.10.10 1 88 2.8E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_25050 9fdb94d35ddf0d07dce8d89811dfc65a 293 Gene3D G3DSA:3.40.190.10 105 285 9.0E-47 T 14-10-2018 DA442_25050 9fdb94d35ddf0d07dce8d89811dfc65a 293 Pfam PF03466 LysR substrate binding domain 88 285 1.0E-31 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_25050 9fdb94d35ddf0d07dce8d89811dfc65a 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.5E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_25050 9fdb94d35ddf0d07dce8d89811dfc65a 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.5E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_25050 9fdb94d35ddf0d07dce8d89811dfc65a 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.5E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_25050 9fdb94d35ddf0d07dce8d89811dfc65a 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.6E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_25050 9fdb94d35ddf0d07dce8d89811dfc65a 293 SUPERFAMILY SSF53850 89 291 1.99E-35 T 14-10-2018 DA442_25050 9fdb94d35ddf0d07dce8d89811dfc65a 293 SUPERFAMILY SSF46785 2 84 7.71E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_25050 9fdb94d35ddf0d07dce8d89811dfc65a 293 Gene3D G3DSA:3.40.190.10 162 261 9.0E-47 T 14-10-2018 DA442_06440 5a03aca6fcee762811182cb1303a31b8 445 SUPERFAMILY SSF49785 39 215 1.79E-11 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily DA442_06440 5a03aca6fcee762811182cb1303a31b8 445 Gene3D G3DSA:3.30.70.270 264 434 4.7E-48 T 14-10-2018 DA442_06440 5a03aca6fcee762811182cb1303a31b8 445 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 276 434 3.1E-42 T 14-10-2018 IPR000160 GGDEF domain DA442_06440 5a03aca6fcee762811182cb1303a31b8 445 SUPERFAMILY SSF55073 283 433 6.54E-41 T 14-10-2018 IPR029787 Nucleotide cyclase DA442_06440 5a03aca6fcee762811182cb1303a31b8 445 Pfam PF00990 Diguanylate cyclase, GGDEF domain 278 430 5.5E-38 T 14-10-2018 IPR000160 GGDEF domain DA442_06440 5a03aca6fcee762811182cb1303a31b8 445 SMART SM00267 267 434 1.1E-46 T 14-10-2018 IPR000160 GGDEF domain DA442_01805 c0c5d24195e9fc8782bd367c107ff8bb 268 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 268 46.822 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 DA442_01805 c0c5d24195e9fc8782bd367c107ff8bb 268 SUPERFAMILY SSF56300 3 252 1.29E-57 T 14-10-2018 DA442_01805 c0c5d24195e9fc8782bd367c107ff8bb 268 PIRSF PIRSF000903 1 268 1.8E-121 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 DA442_01805 c0c5d24195e9fc8782bd367c107ff8bb 268 Pfam PF00149 Calcineurin-like phosphoesterase 4 142 2.5E-13 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DA442_01805 c0c5d24195e9fc8782bd367c107ff8bb 268 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 266 6.7E-118 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 DA442_01805 c0c5d24195e9fc8782bd367c107ff8bb 268 Gene3D G3DSA:3.60.21.10 1 268 1.6E-77 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like DA442_20100 a74ffef8b5f6a643880f8d26f9a83905 204 Pfam PF00043 Glutathione S-transferase, C-terminal domain 132 200 1.2E-8 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal DA442_20100 a74ffef8b5f6a643880f8d26f9a83905 204 SUPERFAMILY SSF52833 1 89 1.21E-19 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_20100 a74ffef8b5f6a643880f8d26f9a83905 204 Gene3D G3DSA:3.40.30.10 1 77 1.2E-21 T 14-10-2018 DA442_20100 a74ffef8b5f6a643880f8d26f9a83905 204 Gene3D G3DSA:1.20.1050.10 83 199 6.3E-31 T 14-10-2018 DA442_20100 a74ffef8b5f6a643880f8d26f9a83905 204 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 79 2.8E-15 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DA442_20100 a74ffef8b5f6a643880f8d26f9a83905 204 SUPERFAMILY SSF47616 72 203 3.06E-24 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DA442_01155 ad568046bc61f10915cc7c33de2d515d 423 Gene3D G3DSA:3.40.50.11720 34 210 1.3E-48 T 14-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 DA442_01155 ad568046bc61f10915cc7c33de2d515d 423 SUPERFAMILY SSF53756 53 412 1.78E-17 T 14-10-2018 DA442_01155 ad568046bc61f10915cc7c33de2d515d 423 Gene3D G3DSA:3.40.50.2000 215 405 7.9E-62 T 14-10-2018 DA442_01155 ad568046bc61f10915cc7c33de2d515d 423 Pfam PF00534 Glycosyl transferases group 1 247 403 5.1E-8 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 DA442_01155 ad568046bc61f10915cc7c33de2d515d 423 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 35 212 3.1E-62 T 14-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 DA442_25395 3294e949e9801e6c77dda3b7a9099c65 92 SUPERFAMILY SSF54534 7 90 1.44E-25 T 14-10-2018 DA442_25395 3294e949e9801e6c77dda3b7a9099c65 92 Gene3D G3DSA:3.10.50.40 2 92 9.6E-34 T 14-10-2018 DA442_25395 3294e949e9801e6c77dda3b7a9099c65 92 Pfam PF13616 PPIC-type PPIASE domain 13 89 2.1E-22 T 14-10-2018 DA442_15055 d38ce83707d381799b609a09c03a0b8d 266 SUPERFAMILY SSF49785 2 149 2.72E-17 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily DA442_15055 d38ce83707d381799b609a09c03a0b8d 266 Gene3D G3DSA:2.60.120.260 26 155 5.1E-8 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily DA442_11795 372723b50e9d2ab701662cb72d265563 213 Gene3D G3DSA:1.10.1670.10 11 203 8.6E-78 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 DA442_11795 372723b50e9d2ab701662cb72d265563 213 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.5E-4 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 DA442_11795 372723b50e9d2ab701662cb72d265563 213 PIRSF PIRSF001435 1 211 5.6E-50 T 14-10-2018 DA442_11795 372723b50e9d2ab701662cb72d265563 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 3.3E-19 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DA442_11795 372723b50e9d2ab701662cb72d265563 213 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 14-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 DA442_11795 372723b50e9d2ab701662cb72d265563 213 Pfam PF00633 Helix-hairpin-helix motif 100 127 5.4E-8 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 DA442_11795 372723b50e9d2ab701662cb72d265563 213 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 14-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 DA442_11795 372723b50e9d2ab701662cb72d265563 213 SMART SM00478 38 185 5.7E-56 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DA442_11795 372723b50e9d2ab701662cb72d265563 213 Hamap MF_00942 Endonuclease III [nth]. 1 209 38.217 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 DA442_11795 372723b50e9d2ab701662cb72d265563 213 SUPERFAMILY SSF48150 2 207 3.3E-71 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 DA442_11795 372723b50e9d2ab701662cb72d265563 213 SMART SM00525 186 206 6.5E-6 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 DA442_11795 372723b50e9d2ab701662cb72d265563 213 TIGRFAM TIGR01083 nth: endonuclease III 4 194 2.1E-88 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 DA442_11795 372723b50e9d2ab701662cb72d265563 213 Gene3D G3DSA:1.10.340.30 21 132 8.6E-78 T 14-10-2018 DA442_14960 ec84b4266ce8788026a2dca6652ca235 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.5E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DA442_14960 ec84b4266ce8788026a2dca6652ca235 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.5E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DA442_14960 ec84b4266ce8788026a2dca6652ca235 336 SUPERFAMILY SSF53822 61 325 1.31E-66 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DA442_14960 ec84b4266ce8788026a2dca6652ca235 336 Pfam PF13377 Periplasmic binding protein-like domain 168 325 9.2E-30 T 14-10-2018 DA442_14960 ec84b4266ce8788026a2dca6652ca235 336 Gene3D G3DSA:3.40.50.2300 160 289 1.4E-65 T 14-10-2018 DA442_14960 ec84b4266ce8788026a2dca6652ca235 336 SMART SM00354 1 71 5.7E-31 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DA442_14960 ec84b4266ce8788026a2dca6652ca235 336 Gene3D G3DSA:3.40.50.2300 62 306 1.4E-65 T 14-10-2018 DA442_14960 ec84b4266ce8788026a2dca6652ca235 336 Gene3D G3DSA:1.10.260.40 1 57 1.2E-22 T 14-10-2018 DA442_14960 ec84b4266ce8788026a2dca6652ca235 336 SUPERFAMILY SSF47413 2 59 1.13E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DA442_14960 ec84b4266ce8788026a2dca6652ca235 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 4.8E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DA442_16355 64d6a6560ad16545fbd439dca3be873d 447 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 2.9E-43 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DA442_16355 64d6a6560ad16545fbd439dca3be873d 447 SMART SM00878 336 441 1.3E-64 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DA442_16355 64d6a6560ad16545fbd439dca3be873d 447 SUPERFAMILY SSF56059 83 346 2.12E-69 T 14-10-2018 DA442_16355 64d6a6560ad16545fbd439dca3be873d 447 SUPERFAMILY SSF51246 331 444 1.36E-43 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 DA442_16355 64d6a6560ad16545fbd439dca3be873d 447 Gene3D G3DSA:3.40.50.20 1 85 5.7E-34 T 14-10-2018 DA442_16355 64d6a6560ad16545fbd439dca3be873d 447 Gene3D G3DSA:3.30.1490.20 131 203 7.2E-157 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DA442_16355 64d6a6560ad16545fbd439dca3be873d 447 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 6.0E-38 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DA442_16355 64d6a6560ad16545fbd439dca3be873d 447 SUPERFAMILY SSF52440 1 113 4.6E-46 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DA442_16355 64d6a6560ad16545fbd439dca3be873d 447 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 1.6E-243 T 14-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 DA442_16355 64d6a6560ad16545fbd439dca3be873d 447 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 3.5E-83 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DA442_16355 64d6a6560ad16545fbd439dca3be873d 447 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DA442_16355 64d6a6560ad16545fbd439dca3be873d 447 Gene3D G3DSA:3.30.470.20 86 433 7.2E-157 T 14-10-2018 DA442_16355 64d6a6560ad16545fbd439dca3be873d 447 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DA442_12060 c3ab5ade836e9f1943b601f975f80ad1 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 124 5.6E-47 T 14-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 DA442_12060 c3ab5ade836e9f1943b601f975f80ad1 126 Pfam PF01042 Endoribonuclease L-PSP 8 124 3.7E-38 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 DA442_12060 c3ab5ade836e9f1943b601f975f80ad1 126 Gene3D G3DSA:3.30.1330.40 1 126 3.8E-50 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DA442_12060 c3ab5ade836e9f1943b601f975f80ad1 126 SUPERFAMILY SSF55298 1 125 3.93E-42 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DA442_03880 38e2821c7b045494d37c7172ade9b96a 363 Gene3D G3DSA:3.40.50.300 4 278 6.0E-151 T 14-10-2018 DA442_03880 38e2821c7b045494d37c7172ade9b96a 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 3.3E-39 T 14-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 DA442_03880 38e2821c7b045494d37c7172ade9b96a 363 Pfam PF01926 50S ribosome-binding GTPase 5 120 1.1E-21 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DA442_03880 38e2821c7b045494d37c7172ade9b96a 363 SUPERFAMILY SSF52540 3 301 1.59E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_03880 38e2821c7b045494d37c7172ade9b96a 363 Gene3D G3DSA:1.10.150.300 120 200 6.0E-151 T 14-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 DA442_03880 38e2821c7b045494d37c7172ade9b96a 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 2.6E-168 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 DA442_03880 38e2821c7b045494d37c7172ade9b96a 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 45.085 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 DA442_03880 38e2821c7b045494d37c7172ade9b96a 363 SUPERFAMILY SSF81271 279 363 2.09E-36 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 DA442_03880 38e2821c7b045494d37c7172ade9b96a 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 4.4E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DA442_03880 38e2821c7b045494d37c7172ade9b96a 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 4.4E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DA442_03880 38e2821c7b045494d37c7172ade9b96a 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 4.4E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DA442_03880 38e2821c7b045494d37c7172ade9b96a 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 4.4E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DA442_03880 38e2821c7b045494d37c7172ade9b96a 363 PIRSF PIRSF006641 1 363 3.1E-157 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 DA442_03880 38e2821c7b045494d37c7172ade9b96a 363 Gene3D G3DSA:3.10.20.30 48 362 6.0E-151 T 14-10-2018 IPR012675 Beta-grasp domain superfamily DA442_00105 b0d3ae2526220c9c1e781b34bf16eb63 207 SUPERFAMILY SSF54211 5 134 2.62E-41 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DA442_00105 b0d3ae2526220c9c1e781b34bf16eb63 207 Pfam PF09186 Domain of unknown function (DUF1949) 143 196 5.8E-11 T 14-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal DA442_00105 b0d3ae2526220c9c1e781b34bf16eb63 207 Pfam PF01205 Uncharacterized protein family UPF0029 20 127 9.1E-26 T 14-10-2018 IPR001498 Impact, N-terminal DA442_00105 b0d3ae2526220c9c1e781b34bf16eb63 207 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 5 200 2.0E-64 T 14-10-2018 IPR015796 Impact family, bacterial/archaeal DA442_00105 b0d3ae2526220c9c1e781b34bf16eb63 207 SUPERFAMILY SSF54980 139 204 6.62E-9 T 14-10-2018 IPR035647 EF-G domain III/V-like DA442_00105 b0d3ae2526220c9c1e781b34bf16eb63 207 Gene3D G3DSA:3.30.230.30 2 136 9.2E-49 T 14-10-2018 IPR036956 Impact, N-terminal domain superfamily DA442_23710 54f0fe46663c93f1d6956dd207b93fb6 280 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 59 2.7E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_23710 54f0fe46663c93f1d6956dd207b93fb6 280 Gene3D G3DSA:3.40.190.10 108 267 1.2E-26 T 14-10-2018 DA442_23710 54f0fe46663c93f1d6956dd207b93fb6 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_23710 54f0fe46663c93f1d6956dd207b93fb6 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_23710 54f0fe46663c93f1d6956dd207b93fb6 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_23710 54f0fe46663c93f1d6956dd207b93fb6 280 Gene3D G3DSA:3.40.190.10 147 245 1.2E-26 T 14-10-2018 DA442_23710 54f0fe46663c93f1d6956dd207b93fb6 280 Gene3D G3DSA:1.10.10.10 1 81 8.0E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_23710 54f0fe46663c93f1d6956dd207b93fb6 280 SUPERFAMILY SSF53850 83 272 6.88E-27 T 14-10-2018 DA442_23710 54f0fe46663c93f1d6956dd207b93fb6 280 SUPERFAMILY SSF46785 1 80 1.49E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_23710 54f0fe46663c93f1d6956dd207b93fb6 280 Pfam PF03466 LysR substrate binding domain 112 274 3.6E-14 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_00415 37c9c8f465bdef918e2b38685381eec5 397 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 395 2.9E-128 T 14-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like DA442_00415 37c9c8f465bdef918e2b38685381eec5 397 Gene3D G3DSA:1.10.8.260 265 325 1.6E-129 T 14-10-2018 IPR023166 HI0933-like insert domain superfamily DA442_00415 37c9c8f465bdef918e2b38685381eec5 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 365 372 7.4E-9 T 14-10-2018 DA442_00415 37c9c8f465bdef918e2b38685381eec5 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 158 167 7.4E-9 T 14-10-2018 DA442_00415 37c9c8f465bdef918e2b38685381eec5 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 7.4E-9 T 14-10-2018 DA442_00415 37c9c8f465bdef918e2b38685381eec5 397 Gene3D G3DSA:3.50.50.60 8 391 1.6E-129 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_00415 37c9c8f465bdef918e2b38685381eec5 397 Pfam PF03486 HI0933-like protein 5 395 1.3E-156 T 14-10-2018 DA442_00415 37c9c8f465bdef918e2b38685381eec5 397 Gene3D G3DSA:2.40.30.10 191 342 1.6E-129 T 14-10-2018 DA442_00415 37c9c8f465bdef918e2b38685381eec5 397 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 1.3E-5 T 14-10-2018 DA442_00415 37c9c8f465bdef918e2b38685381eec5 397 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 350 372 1.3E-5 T 14-10-2018 DA442_00415 37c9c8f465bdef918e2b38685381eec5 397 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.3E-5 T 14-10-2018 DA442_00415 37c9c8f465bdef918e2b38685381eec5 397 SUPERFAMILY SSF160996 193 341 2.22E-40 T 14-10-2018 DA442_00415 37c9c8f465bdef918e2b38685381eec5 397 SUPERFAMILY SSF51905 1 397 5.25E-59 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_17930 17c05ed1021525d025640922650af0ea 397 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DA442_17930 17c05ed1021525d025640922650af0ea 397 PIRSF PIRSF000722 2 397 1.6E-132 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DA442_17930 17c05ed1021525d025640922650af0ea 397 Pfam PF00871 Acetokinase family 6 391 3.1E-142 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DA442_17930 17c05ed1021525d025640922650af0ea 397 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 1.9E-144 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DA442_17930 17c05ed1021525d025640922650af0ea 397 Gene3D G3DSA:3.30.420.40 3 195 1.5E-66 T 14-10-2018 DA442_17930 17c05ed1021525d025640922650af0ea 397 SUPERFAMILY SSF53067 158 396 5.18E-78 T 14-10-2018 DA442_17930 17c05ed1021525d025640922650af0ea 397 PRINTS PR00471 Acetate kinase family signature 299 312 1.3E-44 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DA442_17930 17c05ed1021525d025640922650af0ea 397 PRINTS PR00471 Acetate kinase family signature 321 337 1.3E-44 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DA442_17930 17c05ed1021525d025640922650af0ea 397 PRINTS PR00471 Acetate kinase family signature 203 224 1.3E-44 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DA442_17930 17c05ed1021525d025640922650af0ea 397 PRINTS PR00471 Acetate kinase family signature 6 17 1.3E-44 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DA442_17930 17c05ed1021525d025640922650af0ea 397 PRINTS PR00471 Acetate kinase family signature 173 186 1.3E-44 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DA442_17930 17c05ed1021525d025640922650af0ea 397 PRINTS PR00471 Acetate kinase family signature 378 390 1.3E-44 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DA442_17930 17c05ed1021525d025640922650af0ea 397 Hamap MF_00020 Acetate kinase [ackA]. 1 397 168.659 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DA442_17930 17c05ed1021525d025640922650af0ea 397 SUPERFAMILY SSF53067 5 196 2.5E-62 T 14-10-2018 DA442_17930 17c05ed1021525d025640922650af0ea 397 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 203 220 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DA442_17930 17c05ed1021525d025640922650af0ea 397 Gene3D G3DSA:3.30.420.40 197 397 2.5E-72 T 14-10-2018 DA442_17780 23d589a681cc641de5551f828278ca2c 112 Gene3D G3DSA:3.30.1360.20 15 112 6.1E-33 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 DA442_17780 23d589a681cc641de5551f828278ca2c 112 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 16 107 5.0E-32 T 14-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 DA442_17780 23d589a681cc641de5551f828278ca2c 112 SUPERFAMILY SSF55248 16 109 5.76E-34 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 DA442_17780 23d589a681cc641de5551f828278ca2c 112 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 14 109 22.02 T 14-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 DA442_16585 af7841816b85fbe93c955c9bc0544a50 233 Gene3D G3DSA:3.30.190.20 21 225 2.2E-80 T 14-10-2018 DA442_16585 af7841816b85fbe93c955c9bc0544a50 233 Pfam PF00687 Ribosomal protein L1p/L10e family 31 219 1.4E-52 T 14-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein DA442_16585 af7841816b85fbe93c955c9bc0544a50 233 SUPERFAMILY SSF56808 6 225 1.96E-82 T 14-10-2018 IPR023674 Ribosomal protein L1-like DA442_16585 af7841816b85fbe93c955c9bc0544a50 233 PIRSF PIRSF002155 1 227 6.0E-79 T 14-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_16585 af7841816b85fbe93c955c9bc0544a50 233 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 4.1E-106 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 DA442_16585 af7841816b85fbe93c955c9bc0544a50 233 Gene3D G3DSA:3.40.50.790 68 159 2.2E-80 T 14-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich DA442_16585 af7841816b85fbe93c955c9bc0544a50 233 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 14-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_16585 af7841816b85fbe93c955c9bc0544a50 233 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.018 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 DA442_22250 aaa4329132d0997182489ec3cc90210d 181 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 54 1.1E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DA442_22250 aaa4329132d0997182489ec3cc90210d 181 SUPERFAMILY SSF48498 86 165 6.1E-8 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DA442_22250 aaa4329132d0997182489ec3cc90210d 181 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 2.9E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DA442_22250 aaa4329132d0997182489ec3cc90210d 181 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 2.9E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DA442_22250 aaa4329132d0997182489ec3cc90210d 181 Gene3D G3DSA:1.10.357.10 1 181 2.1E-47 T 14-10-2018 DA442_22250 aaa4329132d0997182489ec3cc90210d 181 SUPERFAMILY SSF46689 2 71 2.05E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_18610 f73f5a5ebf9492c8c5a83e397019e7f7 175 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 2.3E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DA442_18610 f73f5a5ebf9492c8c5a83e397019e7f7 175 Gene3D G3DSA:3.30.700.10 7 94 5.9E-13 T 14-10-2018 DA442_18610 f73f5a5ebf9492c8c5a83e397019e7f7 175 SUPERFAMILY SSF54523 7 113 4.79E-14 T 14-10-2018 DA442_18610 f73f5a5ebf9492c8c5a83e397019e7f7 175 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DA442_18610 f73f5a5ebf9492c8c5a83e397019e7f7 175 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 9.3E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DA442_03025 e15d318b6c28095817eeb3497160b815 544 ProSitePatterns PS00510 Malate synthase signature. 277 292 - T 14-10-2018 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 DA442_03025 e15d318b6c28095817eeb3497160b815 544 Pfam PF01274 Malate synthase 23 543 1.3E-202 T 14-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 DA442_03025 e15d318b6c28095817eeb3497160b815 544 Gene3D G3DSA:1.20.1220.12 423 544 1.6E-50 T 14-10-2018 DA442_03025 e15d318b6c28095817eeb3497160b815 544 PIRSF PIRSF001363 12 544 9.7E-253 T 14-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 DA442_03025 e15d318b6c28095817eeb3497160b815 544 Gene3D G3DSA:3.20.20.360 13 422 1.1E-189 T 14-10-2018 DA442_03025 e15d318b6c28095817eeb3497160b815 544 SUPERFAMILY SSF51645 10 543 3.92E-188 T 14-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 DA442_03025 e15d318b6c28095817eeb3497160b815 544 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 34 543 1.5E-264 T 14-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 DA442_03555 ccddb1d622b9078e79e90c2e187c79ae 207 Gene3D G3DSA:3.40.50.1820 13 203 5.7E-31 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_03555 ccddb1d622b9078e79e90c2e187c79ae 207 SUPERFAMILY SSF53474 6 202 7.44E-28 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_03555 ccddb1d622b9078e79e90c2e187c79ae 207 Pfam PF12697 Alpha/beta hydrolase family 15 126 3.8E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DA442_09000 1cde7787bb077e50977976fa307f74cf 248 Gene3D G3DSA:3.30.420.10 53 239 5.0E-35 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DA442_09000 1cde7787bb077e50977976fa307f74cf 248 Pfam PF00929 Exonuclease 59 229 2.4E-17 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DA442_09000 1cde7787bb077e50977976fa307f74cf 248 SMART SM00479 57 238 1.6E-26 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DA442_09000 1cde7787bb077e50977976fa307f74cf 248 SUPERFAMILY SSF53098 50 238 6.79E-40 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DA442_25475 68aa6d97e827d4c65b75f6d76edb5e35 816 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 607 678 3.9E-9 T 14-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial DA442_25475 68aa6d97e827d4c65b75f6d76edb5e35 816 Gene3D G3DSA:1.10.1740.190 303 450 2.5E-33 T 14-10-2018 DA442_25475 68aa6d97e827d4c65b75f6d76edb5e35 816 Gene3D G3DSA:2.60.120.380 711 815 2.1E-7 T 14-10-2018 DA442_25475 68aa6d97e827d4c65b75f6d76edb5e35 816 Gene3D G3DSA:2.60.120.380 591 692 1.7E-12 T 14-10-2018 DA442_25475 68aa6d97e827d4c65b75f6d76edb5e35 816 Pfam PF01752 Collagenase 274 558 3.0E-112 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 DA442_25475 68aa6d97e827d4c65b75f6d76edb5e35 816 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 374 388 1.1E-31 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 DA442_25475 68aa6d97e827d4c65b75f6d76edb5e35 816 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 97 115 1.1E-31 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 DA442_25475 68aa6d97e827d4c65b75f6d76edb5e35 816 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 434 452 1.1E-31 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 DA442_25475 68aa6d97e827d4c65b75f6d76edb5e35 816 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 458 473 1.1E-31 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 DA442_25475 68aa6d97e827d4c65b75f6d76edb5e35 816 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 392 408 1.1E-31 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 DA442_25475 68aa6d97e827d4c65b75f6d76edb5e35 816 Pfam PF08453 Peptidase family M9 N-terminal 31 212 1.6E-54 T 14-10-2018 IPR013661 Peptidase M9, collagenase, N-terminal domain DA442_03100 a2db7c719c92a21cc79a780a133f6094 127 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 2.1E-69 T 14-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 DA442_03100 a2db7c719c92a21cc79a780a133f6094 127 Gene3D G3DSA:3.90.1010.10 1 127 5.3E-59 T 14-10-2018 DA442_03100 a2db7c719c92a21cc79a780a133f6094 127 Pfam PF01592 NifU-like N terminal domain 2 126 1.4E-56 T 14-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 DA442_03100 a2db7c719c92a21cc79a780a133f6094 127 SUPERFAMILY SSF82649 1 125 4.97E-48 T 14-10-2018 DA442_23960 bb01ffdb3f143b40b7375423370f4cdd 221 Pfam PF00072 Response regulator receiver domain 4 112 1.5E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_23960 bb01ffdb3f143b40b7375423370f4cdd 221 SUPERFAMILY SSF46894 140 215 1.25E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DA442_23960 bb01ffdb3f143b40b7375423370f4cdd 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 141 214 1.3E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DA442_23960 bb01ffdb3f143b40b7375423370f4cdd 221 SUPERFAMILY SSF52172 2 128 1.57E-38 T 14-10-2018 IPR011006 CheY-like superfamily DA442_23960 bb01ffdb3f143b40b7375423370f4cdd 221 SMART SM00862 137 215 3.5E-15 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DA442_23960 bb01ffdb3f143b40b7375423370f4cdd 221 Gene3D G3DSA:3.40.50.2300 1 119 7.8E-34 T 14-10-2018 DA442_23960 bb01ffdb3f143b40b7375423370f4cdd 221 SMART SM00448 2 112 2.1E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_23960 bb01ffdb3f143b40b7375423370f4cdd 221 Gene3D G3DSA:1.10.10.10 120 220 1.1E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_04490 d7a1c4418dd7fa4960d663ae5130cedd 758 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 9 687 6.7E-180 T 14-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 DA442_04490 d7a1c4418dd7fa4960d663ae5130cedd 758 SUPERFAMILY SSF52540 4 193 2.06E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_04490 d7a1c4418dd7fa4960d663ae5130cedd 758 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.4E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DA442_04490 d7a1c4418dd7fa4960d663ae5130cedd 758 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 53 68 2.4E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DA442_04490 d7a1c4418dd7fa4960d663ae5130cedd 758 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.4E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DA442_04490 d7a1c4418dd7fa4960d663ae5130cedd 758 Gene3D G3DSA:3.40.50.300 3 200 6.2E-44 T 14-10-2018 DA442_04490 d7a1c4418dd7fa4960d663ae5130cedd 758 Pfam PF02421 Ferrous iron transport protein B 4 161 6.7E-59 T 14-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 DA442_04490 d7a1c4418dd7fa4960d663ae5130cedd 758 Pfam PF07664 Ferrous iron transport protein B C terminus 452 504 9.5E-19 T 14-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 DA442_04490 d7a1c4418dd7fa4960d663ae5130cedd 758 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 156 2.6E-13 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DA442_04490 d7a1c4418dd7fa4960d663ae5130cedd 758 Pfam PF07670 Nucleoside recognition 349 440 2.1E-13 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 DA442_04490 d7a1c4418dd7fa4960d663ae5130cedd 758 Pfam PF07670 Nucleoside recognition 509 690 2.9E-37 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 DA442_14285 443d5e413515bcbb4e5c5095f1d00eb0 117 PIRSF PIRSF002191 1 117 4.6E-51 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_14285 443d5e413515bcbb4e5c5095f1d00eb0 117 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 14-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_14285 443d5e413515bcbb4e5c5095f1d00eb0 117 Pfam PF01245 Ribosomal protein L19 3 113 5.1E-50 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_14285 443d5e413515bcbb4e5c5095f1d00eb0 117 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 31.297 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_14285 443d5e413515bcbb4e5c5095f1d00eb0 117 PRINTS PR00061 Ribosomal protein L19 signature 88 113 1.7E-40 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_14285 443d5e413515bcbb4e5c5095f1d00eb0 117 PRINTS PR00061 Ribosomal protein L19 signature 34 63 1.7E-40 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_14285 443d5e413515bcbb4e5c5095f1d00eb0 117 PRINTS PR00061 Ribosomal protein L19 signature 4 33 1.7E-40 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_14285 443d5e413515bcbb4e5c5095f1d00eb0 117 SUPERFAMILY SSF50104 2 115 1.81E-47 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily DA442_14285 443d5e413515bcbb4e5c5095f1d00eb0 117 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 9.1E-52 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_14285 443d5e413515bcbb4e5c5095f1d00eb0 117 Gene3D G3DSA:2.30.30.790 3 117 1.8E-17 T 14-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_15385 8a0649317123eee5c30ee6757843f130 373 Gene3D G3DSA:3.90.1150.10 9 371 2.0E-144 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DA442_15385 8a0649317123eee5c30ee6757843f130 373 SUPERFAMILY SSF53383 9 371 3.74E-103 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_15385 8a0649317123eee5c30ee6757843f130 373 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 209 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site DA442_15385 8a0649317123eee5c30ee6757843f130 373 Pfam PF00266 Aminotransferase class-V 13 349 1.6E-38 T 14-10-2018 IPR000192 Aminotransferase class V domain DA442_15385 8a0649317123eee5c30ee6757843f130 373 Gene3D G3DSA:3.40.640.10 22 269 2.0E-144 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_15385 8a0649317123eee5c30ee6757843f130 373 PIRSF PIRSF000524 5 373 3.6E-111 T 14-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 DA442_00825 5c459d6fa5fecd37ee0bdb98b0c0c91a 227 Gene3D G3DSA:3.40.1280.10 1 204 6.0E-59 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DA442_00825 5c459d6fa5fecd37ee0bdb98b0c0c91a 227 Pfam PF00588 SpoU rRNA Methylase family 20 158 7.5E-35 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 DA442_00825 5c459d6fa5fecd37ee0bdb98b0c0c91a 227 Pfam PF12105 SpoU, rRNA methylase, C-terminal 162 217 4.4E-25 T 14-10-2018 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 DA442_00825 5c459d6fa5fecd37ee0bdb98b0c0c91a 227 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 2 196 34.913 T 14-10-2018 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 DA442_00825 5c459d6fa5fecd37ee0bdb98b0c0c91a 227 SUPERFAMILY SSF75217 4 173 5.76E-46 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases DA442_08615 e3b039581209f41c451c5da1059f5e4c 863 Pfam PF00330 Aconitase family (aconitate hydratase) 74 537 7.8E-146 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DA442_08615 e3b039581209f41c451c5da1059f5e4c 863 Gene3D G3DSA:3.20.19.10 623 861 2.4E-83 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 DA442_08615 e3b039581209f41c451c5da1059f5e4c 863 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 6 862 0.0 T 14-10-2018 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 DA442_08615 e3b039581209f41c451c5da1059f5e4c 863 Gene3D G3DSA:3.30.499.10 361 565 2.7E-78 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 DA442_08615 e3b039581209f41c451c5da1059f5e4c 863 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 20 859 8.4E-292 T 14-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 DA442_08615 e3b039581209f41c451c5da1059f5e4c 863 SUPERFAMILY SSF52016 602 860 1.75E-67 T 14-10-2018 DA442_08615 e3b039581209f41c451c5da1059f5e4c 863 Pfam PF00694 Aconitase C-terminal domain 660 790 3.5E-30 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 DA442_08615 e3b039581209f41c451c5da1059f5e4c 863 Gene3D G3DSA:1.10.1440.20 566 622 2.3E-10 T 14-10-2018 DA442_08615 e3b039581209f41c451c5da1059f5e4c 863 SUPERFAMILY SSF53732 16 595 1.11E-187 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 DA442_08615 e3b039581209f41c451c5da1059f5e4c 863 Gene3D G3DSA:3.30.499.20 8 360 4.2E-131 T 14-10-2018 DA442_08615 e3b039581209f41c451c5da1059f5e4c 863 PRINTS PR00415 Aconitase family signature 209 224 2.1E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DA442_08615 e3b039581209f41c451c5da1059f5e4c 863 PRINTS PR00415 Aconitase family signature 271 284 2.1E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DA442_08615 e3b039581209f41c451c5da1059f5e4c 863 PRINTS PR00415 Aconitase family signature 468 481 2.1E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DA442_08615 e3b039581209f41c451c5da1059f5e4c 863 PRINTS PR00415 Aconitase family signature 142 155 2.1E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DA442_08615 e3b039581209f41c451c5da1059f5e4c 863 PRINTS PR00415 Aconitase family signature 166 174 2.1E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DA442_08615 e3b039581209f41c451c5da1059f5e4c 863 PRINTS PR00415 Aconitase family signature 195 208 2.1E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DA442_08615 e3b039581209f41c451c5da1059f5e4c 863 PRINTS PR00415 Aconitase family signature 364 378 2.1E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DA442_08615 e3b039581209f41c451c5da1059f5e4c 863 PRINTS PR00415 Aconitase family signature 285 298 2.1E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DA442_08615 e3b039581209f41c451c5da1059f5e4c 863 PRINTS PR00415 Aconitase family signature 406 417 2.1E-26 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DA442_13955 a7c4393a94f6925c83ea841d93342960 157 SUPERFAMILY SSF54534 81 156 1.83E-24 T 14-10-2018 DA442_13955 a7c4393a94f6925c83ea841d93342960 157 Pfam PF03449 Transcription elongation factor, N-terminal 4 73 4.4E-24 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 DA442_13955 a7c4393a94f6925c83ea841d93342960 157 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 154 8.8E-54 T 14-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 DA442_13955 a7c4393a94f6925c83ea841d93342960 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 DA442_13955 a7c4393a94f6925c83ea841d93342960 157 Gene3D G3DSA:3.10.50.30 75 157 3.3E-31 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 DA442_13955 a7c4393a94f6925c83ea841d93342960 157 Gene3D G3DSA:1.10.287.180 1 74 7.0E-25 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 DA442_13955 a7c4393a94f6925c83ea841d93342960 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 32.018 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 DA442_13955 a7c4393a94f6925c83ea841d93342960 157 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 47 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 DA442_13955 a7c4393a94f6925c83ea841d93342960 157 SUPERFAMILY SSF46557 2 75 1.02E-24 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 DA442_13955 a7c4393a94f6925c83ea841d93342960 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 7.0E-28 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 DA442_13955 a7c4393a94f6925c83ea841d93342960 157 PIRSF PIRSF006092 1 157 3.4E-47 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 DA442_13060 c4068fb5d2e4224c0031fa1356b2bed5 367 Pfam PF03562 MltA specific insert domain 69 251 1.4E-37 T 14-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 DA442_13060 c4068fb5d2e4224c0031fa1356b2bed5 367 SUPERFAMILY SSF50685 22 350 6.63E-101 T 14-10-2018 IPR036908 RlpA-like domain superfamily DA442_13060 c4068fb5d2e4224c0031fa1356b2bed5 367 Gene3D G3DSA:2.40.240.50 119 257 5.0E-133 T 14-10-2018 DA442_13060 c4068fb5d2e4224c0031fa1356b2bed5 367 Gene3D G3DSA:2.40.40.10 51 348 5.0E-133 T 14-10-2018 IPR036908 RlpA-like domain superfamily DA442_13060 c4068fb5d2e4224c0031fa1356b2bed5 367 SMART SM00925 119 252 7.2E-66 T 14-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 DA442_13060 c4068fb5d2e4224c0031fa1356b2bed5 367 Pfam PF06725 3D domain 272 348 5.2E-21 T 14-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 DA442_02920 8385439433c72f75a19007377aa57654 279 Gene3D G3DSA:3.30.1380.10 20 279 3.3E-98 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 DA442_02920 8385439433c72f75a19007377aa57654 279 SUPERFAMILY SSF55166 21 276 2.2E-97 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 DA442_02920 8385439433c72f75a19007377aa57654 279 Pfam PF03411 Penicillin-insensitive murein endopeptidase 36 276 4.1E-95 T 14-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 DA442_02920 8385439433c72f75a19007377aa57654 279 PIRSF PIRSF018455 1 279 3.5E-117 T 14-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 DA442_15555 cd940285ecb4011c724043b8d2c4c8dd 466 Gene3D G3DSA:3.40.50.300 177 456 2.5E-106 T 14-10-2018 DA442_15555 cd940285ecb4011c724043b8d2c4c8dd 466 SUPERFAMILY SSF52540 197 449 7.42E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_15555 cd940285ecb4011c724043b8d2c4c8dd 466 Pfam PF00772 DnaB-like helicase N terminal domain 20 121 4.5E-35 T 14-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 DA442_15555 cd940285ecb4011c724043b8d2c4c8dd 466 SUPERFAMILY SSF48024 18 129 4.58E-37 T 14-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 DA442_15555 cd940285ecb4011c724043b8d2c4c8dd 466 Gene3D G3DSA:1.10.860.10 12 176 2.2E-53 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal DA442_15555 cd940285ecb4011c724043b8d2c4c8dd 466 Pfam PF03796 DnaB-like helicase C terminal domain 199 455 8.3E-113 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 DA442_15555 cd940285ecb4011c724043b8d2c4c8dd 466 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 20 457 5.7E-175 T 14-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 DA442_04675 2d6560164f9c0f488f3a4a2315ccd8fa 85 Hamap MF_01217 Acyl carrier protein [acpP]. 8 82 13.802 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 DA442_04675 2d6560164f9c0f488f3a4a2315ccd8fa 85 Gene3D G3DSA:1.10.1200.10 3 85 6.5E-19 T 14-10-2018 IPR036736 ACP-like superfamily DA442_04675 2d6560164f9c0f488f3a4a2315ccd8fa 85 Pfam PF00550 Phosphopantetheine attachment site 11 78 2.8E-12 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain DA442_04675 2d6560164f9c0f488f3a4a2315ccd8fa 85 SUPERFAMILY SSF47336 4 83 9.03E-20 T 14-10-2018 IPR036736 ACP-like superfamily DA442_06405 cafe40b005be18060195e547c512e204 443 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 443 269.991 T 14-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 DA442_06405 cafe40b005be18060195e547c512e204 443 Gene3D G3DSA:3.40.50.1100 116 238 2.0E-193 T 14-10-2018 DA442_06405 cafe40b005be18060195e547c512e204 443 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 108 122 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 DA442_06405 cafe40b005be18060195e547c512e204 443 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 12 438 2.0E-218 T 14-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 DA442_06405 cafe40b005be18060195e547c512e204 443 Gene3D G3DSA:3.40.50.1100 24 438 2.0E-193 T 14-10-2018 DA442_06405 cafe40b005be18060195e547c512e204 443 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 76 403 2.8E-63 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DA442_06405 cafe40b005be18060195e547c512e204 443 SUPERFAMILY SSF53686 74 431 3.98E-56 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DA442_15695 1bc87ca6c4a30ad60ce926540d347c8e 300 Gene3D G3DSA:3.20.20.220 1 299 3.6E-112 T 14-10-2018 DA442_15695 1bc87ca6c4a30ad60ce926540d347c8e 300 SUPERFAMILY SSF51730 22 294 2.16E-95 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like DA442_15695 1bc87ca6c4a30ad60ce926540d347c8e 300 Pfam PF02219 Methylenetetrahydrofolate reductase 17 291 1.9E-100 T 14-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 DA442_15695 1bc87ca6c4a30ad60ce926540d347c8e 300 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 8.1E-103 T 14-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 DA442_00690 bb8d16d25b8a64e1f83505759b710d84 307 Gene3D G3DSA:2.30.42.10 204 307 6.8E-26 T 14-10-2018 DA442_00690 bb8d16d25b8a64e1f83505759b710d84 307 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 34 307 9.4E-74 T 14-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 DA442_00690 bb8d16d25b8a64e1f83505759b710d84 307 Pfam PF11356 Type II secretion system protein C 37 177 3.1E-43 T 14-10-2018 IPR024961 Type II secretion system protein C, N-terminal DA442_00690 bb8d16d25b8a64e1f83505759b710d84 307 SUPERFAMILY SSF50156 211 307 5.46E-19 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 DA442_00690 bb8d16d25b8a64e1f83505759b710d84 307 Gene3D G3DSA:2.30.30.830 111 178 1.1E-27 T 14-10-2018 DA442_00690 bb8d16d25b8a64e1f83505759b710d84 307 ProSitePatterns PS01141 Bacterial type II secretion system protein C signature. 245 271 - T 14-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 DA442_03260 9965c02bb4292eb35eac7871d36606f7 422 SUPERFAMILY SSF53383 1 421 2.26E-127 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_03260 9965c02bb4292eb35eac7871d36606f7 422 Gene3D G3DSA:3.90.1150.10 289 422 6.6E-53 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DA442_03260 9965c02bb4292eb35eac7871d36606f7 422 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 420 1.9E-143 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DA442_03260 9965c02bb4292eb35eac7871d36606f7 422 Gene3D G3DSA:3.40.640.10 1 285 1.5E-100 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_03260 9965c02bb4292eb35eac7871d36606f7 422 PIRSF PIRSF001434 1 422 1.3E-129 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DA442_03260 9965c02bb4292eb35eac7871d36606f7 422 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 3 420 5.9E-201 T 14-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 DA442_03260 9965c02bb4292eb35eac7871d36606f7 422 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 196 210 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DA442_20415 c6ca07c66e98d588cd8ca52e7c97470c 312 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 26 279 4.8E-62 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 DA442_20415 c6ca07c66e98d588cd8ca52e7c97470c 312 SUPERFAMILY SSF53850 20 296 4.21E-90 T 14-10-2018 DA442_20415 c6ca07c66e98d588cd8ca52e7c97470c 312 TIGRFAM TIGR03414 ABC_choline_bnd: choline ABC transporter, periplasmic binding protein 22 306 1.5E-144 T 14-10-2018 IPR017783 Choline ABC transporter, substrate-binding protein GO:0015871|GO:0033265|GO:0042597 DA442_20415 c6ca07c66e98d588cd8ca52e7c97470c 312 Gene3D G3DSA:3.40.190.10 28 289 1.1E-95 T 14-10-2018 DA442_20415 c6ca07c66e98d588cd8ca52e7c97470c 312 Gene3D G3DSA:3.40.190.100 109 218 1.1E-95 T 14-10-2018 DA442_19045 c7cb569c017977f06d33eeb7d8ae86be 582 Pfam PF01268 Formate--tetrahydrofolate ligase 3 581 1.1E-238 T 14-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 DA442_19045 c7cb569c017977f06d33eeb7d8ae86be 582 Gene3D G3DSA:3.10.410.10 469 558 1.3E-29 T 14-10-2018 DA442_19045 c7cb569c017977f06d33eeb7d8ae86be 582 Gene3D G3DSA:3.30.1510.10 129 264 1.9E-186 T 14-10-2018 DA442_19045 c7cb569c017977f06d33eeb7d8ae86be 582 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 345 356 - T 14-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 DA442_19045 c7cb569c017977f06d33eeb7d8ae86be 582 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 103 113 - T 14-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 DA442_19045 c7cb569c017977f06d33eeb7d8ae86be 582 Gene3D G3DSA:3.40.50.300 4 454 1.9E-186 T 14-10-2018 DA442_19045 c7cb569c017977f06d33eeb7d8ae86be 582 SUPERFAMILY SSF52540 4 580 2.39E-214 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_19045 c7cb569c017977f06d33eeb7d8ae86be 582 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 582 42.293 T 14-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 DA442_00235 95005ee4e08428bbbcd06d3e3e012cef 241 Gene3D G3DSA:1.20.120.710 15 109 1.5E-59 T 14-10-2018 DA442_00235 95005ee4e08428bbbcd06d3e3e012cef 241 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 209 1.5E-22 T 14-10-2018 DA442_00235 95005ee4e08428bbbcd06d3e3e012cef 241 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 109 203 1.7E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DA442_00235 95005ee4e08428bbbcd06d3e3e012cef 241 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 92 209 3.4E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DA442_00235 95005ee4e08428bbbcd06d3e3e012cef 241 SUPERFAMILY SSF56784 3 237 9.63E-43 T 14-10-2018 IPR036412 HAD-like superfamily DA442_00235 95005ee4e08428bbbcd06d3e3e012cef 241 Gene3D G3DSA:3.40.50.1000 3 232 1.5E-59 T 14-10-2018 IPR023214 HAD superfamily DA442_06595 0253a01a3689729b8bca4272df663f97 286 Pfam PF00440 Bacterial regulatory proteins, tetR family 59 105 8.5E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DA442_06595 0253a01a3689729b8bca4272df663f97 286 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 80 103 1.2E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DA442_06595 0253a01a3689729b8bca4272df663f97 286 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 59 72 1.2E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DA442_06595 0253a01a3689729b8bca4272df663f97 286 Gene3D G3DSA:1.10.357.10 46 236 1.9E-17 T 14-10-2018 DA442_06595 0253a01a3689729b8bca4272df663f97 286 SUPERFAMILY SSF46689 51 110 4.72E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_16295 91e4d5013af9937b6ef10adf9b242c83 575 Pfam PF00474 Sodium:solute symporter family 373 491 1.4E-16 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 DA442_16295 91e4d5013af9937b6ef10adf9b242c83 575 Pfam PF00474 Sodium:solute symporter family 33 296 2.0E-36 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 DA442_16295 91e4d5013af9937b6ef10adf9b242c83 575 Gene3D G3DSA:1.20.1730.10 344 554 1.2E-26 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily DA442_16295 91e4d5013af9937b6ef10adf9b242c83 575 Gene3D G3DSA:1.20.1730.10 21 329 2.0E-35 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily DA442_16295 91e4d5013af9937b6ef10adf9b242c83 575 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 7 566 5.1E-258 T 14-10-2018 IPR019899 Sodium/solute symporter, VC2705 subfamily DA442_04425 305b259e68a77dd8f95f064831f4ab21 114 Gene3D G3DSA:1.20.1300.10 1 114 4.3E-28 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DA442_04425 305b259e68a77dd8f95f064831f4ab21 114 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 10 101 2.6E-6 T 14-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DA442_04425 305b259e68a77dd8f95f064831f4ab21 114 PIRSF PIRSF000169 1 114 1.1E-37 T 14-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 DA442_04425 305b259e68a77dd8f95f064831f4ab21 114 SUPERFAMILY SSF81343 4 113 9.16E-26 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DA442_04425 305b259e68a77dd8f95f064831f4ab21 114 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 112 5.2E-35 T 14-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 DA442_20885 d556420b5b4e9c8994083f698777d1b2 151 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 32 145 2.8E-48 T 14-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB DA442_20885 d556420b5b4e9c8994083f698777d1b2 151 SUPERFAMILY SSF48695 34 149 3.35E-41 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily DA442_20885 d556420b5b4e9c8994083f698777d1b2 151 Gene3D G3DSA:1.10.1130.10 65 132 1.3E-28 T 14-10-2018 DA442_20885 d556420b5b4e9c8994083f698777d1b2 151 PIRSF PIRSF006105 1 151 3.1E-47 T 14-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB DA442_04520 7de080ca1a016b9fb4c943c6310fb9e1 277 Pfam PF00551 Formyl transferase 82 259 5.9E-50 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DA442_04520 7de080ca1a016b9fb4c943c6310fb9e1 277 Gene3D G3DSA:3.30.70.260 1 77 3.6E-15 T 14-10-2018 DA442_04520 7de080ca1a016b9fb4c943c6310fb9e1 277 SUPERFAMILY SSF55021 4 55 2.33E-8 T 14-10-2018 DA442_04520 7de080ca1a016b9fb4c943c6310fb9e1 277 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 277 44.977 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DA442_04520 7de080ca1a016b9fb4c943c6310fb9e1 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 229 251 1.8E-64 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DA442_04520 7de080ca1a016b9fb4c943c6310fb9e1 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 251 276 1.8E-64 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DA442_04520 7de080ca1a016b9fb4c943c6310fb9e1 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 1.8E-64 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DA442_04520 7de080ca1a016b9fb4c943c6310fb9e1 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 1.8E-64 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DA442_04520 7de080ca1a016b9fb4c943c6310fb9e1 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 83 105 1.8E-64 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DA442_04520 7de080ca1a016b9fb4c943c6310fb9e1 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 105 132 1.8E-64 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DA442_04520 7de080ca1a016b9fb4c943c6310fb9e1 277 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 5 277 1.3E-122 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DA442_04520 7de080ca1a016b9fb4c943c6310fb9e1 277 SUPERFAMILY SSF53328 82 276 1.7E-60 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DA442_04520 7de080ca1a016b9fb4c943c6310fb9e1 277 Pfam PF01842 ACT domain 5 65 1.2E-6 T 14-10-2018 IPR002912 ACT domain DA442_04520 7de080ca1a016b9fb4c943c6310fb9e1 277 PIRSF PIRSF036480 1 277 1.1E-111 T 14-10-2018 DA442_04520 7de080ca1a016b9fb4c943c6310fb9e1 277 Gene3D G3DSA:3.40.50.170 81 277 1.5E-67 T 14-10-2018 DA442_13310 9a9d8d07d9662048253659da440dd885 172 Pfam PF07811 TadE-like protein 10 52 9.6E-8 T 14-10-2018 IPR012495 TadE-like DA442_22000 55db075df003c37c61532b8693842ed6 321 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 128 302 7.8E-17 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DA442_22000 55db075df003c37c61532b8693842ed6 321 Gene3D G3DSA:3.40.190.10 209 305 3.4E-10 T 14-10-2018 DA442_22000 55db075df003c37c61532b8693842ed6 321 SMART SM00062 49 305 1.9E-16 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DA442_22000 55db075df003c37c61532b8693842ed6 321 Gene3D G3DSA:3.40.190.10 32 176 2.2E-20 T 14-10-2018 DA442_22000 55db075df003c37c61532b8693842ed6 321 SUPERFAMILY SSF53850 21 303 1.38E-36 T 14-10-2018 DA442_21660 370fe25a757cc7937975a16dd89e33b2 576 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 26 556 7.8E-183 T 14-10-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 DA442_21660 370fe25a757cc7937975a16dd89e33b2 576 ProSitePatterns PS00211 ABC transporters family signature. 467 481 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_21660 370fe25a757cc7937975a16dd89e33b2 576 Gene3D G3DSA:1.20.1560.10 9 313 1.3E-25 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DA442_21660 370fe25a757cc7937975a16dd89e33b2 576 Gene3D G3DSA:3.40.50.300 315 560 2.1E-65 T 14-10-2018 DA442_21660 370fe25a757cc7937975a16dd89e33b2 576 SUPERFAMILY SSF52540 319 554 1.98E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_21660 370fe25a757cc7937975a16dd89e33b2 576 Pfam PF00005 ABC transporter 347 494 2.6E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_21660 370fe25a757cc7937975a16dd89e33b2 576 SUPERFAMILY SSF90123 22 311 2.35E-35 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DA442_21660 370fe25a757cc7937975a16dd89e33b2 576 SMART SM00382 356 542 2.2E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_15760 e4804df6c9002d929b7e6b9c7e300a2d 131 Gene3D G3DSA:3.40.1260.10 1 131 9.0E-53 T 14-10-2018 IPR027396 DsrEFH-like DA442_15760 e4804df6c9002d929b7e6b9c7e300a2d 131 SUPERFAMILY SSF75169 6 131 1.02E-38 T 14-10-2018 IPR027396 DsrEFH-like DA442_15760 e4804df6c9002d929b7e6b9c7e300a2d 131 Pfam PF02635 DsrE/DsrF-like family 6 131 6.5E-28 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein DA442_15760 e4804df6c9002d929b7e6b9c7e300a2d 131 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 5 131 5.6E-55 T 14-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 DA442_01170 82ec05c47271de48e82f724c321c4a56 313 Gene3D G3DSA:3.90.25.10 173 295 4.2E-115 T 14-10-2018 DA442_01170 82ec05c47271de48e82f724c321c4a56 313 SUPERFAMILY SSF51735 1 308 2.45E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_01170 82ec05c47271de48e82f724c321c4a56 313 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 241 2.2E-44 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DA442_01170 82ec05c47271de48e82f724c321c4a56 313 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 313 46.373 T 14-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 DA442_01170 82ec05c47271de48e82f724c321c4a56 313 Gene3D G3DSA:3.40.50.720 3 307 4.2E-115 T 14-10-2018 DA442_01170 82ec05c47271de48e82f724c321c4a56 313 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 309 2.9E-126 T 14-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 DA442_16090 03581bd37b1030b49d7bc02cef145938 510 Pfam PF01676 Metalloenzyme superfamily 5 498 8.9E-81 T 14-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 DA442_16090 03581bd37b1030b49d7bc02cef145938 510 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 5 510 49.351 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DA442_16090 03581bd37b1030b49d7bc02cef145938 510 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 508 1.3E-227 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DA442_16090 03581bd37b1030b49d7bc02cef145938 510 SUPERFAMILY SSF64158 78 308 1.44E-80 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DA442_16090 03581bd37b1030b49d7bc02cef145938 510 Gene3D G3DSA:3.40.1450.10 78 310 1.9E-209 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DA442_16090 03581bd37b1030b49d7bc02cef145938 510 PIRSF PIRSF001492 1 510 2.0E-202 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DA442_16090 03581bd37b1030b49d7bc02cef145938 510 Gene3D G3DSA:3.40.720.10 6 509 1.9E-209 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DA442_16090 03581bd37b1030b49d7bc02cef145938 510 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 83 297 3.3E-80 T 14-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DA442_16090 03581bd37b1030b49d7bc02cef145938 510 SUPERFAMILY SSF53649 4 509 8.64E-76 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DA442_00290 ce6750658b3c8bb4cf761c3dea4fbb47 190 TIGRFAM TIGR02999 Sig-70_X6: RNA polymerase sigma factor, TIGR02999 family 6 187 4.8E-57 T 14-10-2018 IPR011517 RNA polymerase sigma-70 ECF-like DA442_00290 ce6750658b3c8bb4cf761c3dea4fbb47 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 187 2.3E-17 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DA442_00290 ce6750658b3c8bb4cf761c3dea4fbb47 190 SUPERFAMILY SSF88659 123 187 3.18E-6 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DA442_00290 ce6750658b3c8bb4cf761c3dea4fbb47 190 Pfam PF07638 ECF sigma factor 6 188 1.4E-29 T 14-10-2018 IPR011517 RNA polymerase sigma-70 ECF-like DA442_00290 ce6750658b3c8bb4cf761c3dea4fbb47 190 Gene3D G3DSA:1.10.10.10 125 189 4.8E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_24550 135f7649ef7684c6aaf703914d0f0e1f 144 Pfam PF00460 Flagella basal body rod protein 11 32 1.2E-5 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 DA442_24550 135f7649ef7684c6aaf703914d0f0e1f 144 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 96 140 1.5E-8 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DA442_24550 135f7649ef7684c6aaf703914d0f0e1f 144 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 7 142 6.2E-40 T 14-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 DA442_00820 1f6684a3a0879acdc4d9943f1d4fc822 693 Gene3D G3DSA:1.10.150.20 3 41 5.5E-5 T 14-10-2018 DA442_00820 1f6684a3a0879acdc4d9943f1d4fc822 693 SUPERFAMILY SSF50249 9 174 3.08E-41 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_00820 1f6684a3a0879acdc4d9943f1d4fc822 693 Pfam PF17191 RecG wedge domain 14 172 2.0E-21 T 14-10-2018 IPR033454 RecG, wedge domain DA442_00820 1f6684a3a0879acdc4d9943f1d4fc822 693 Gene3D G3DSA:2.40.50.140 47 141 2.4E-13 T 14-10-2018 DA442_00820 1f6684a3a0879acdc4d9943f1d4fc822 693 SMART SM00487 265 459 1.8E-30 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DA442_00820 1f6684a3a0879acdc4d9943f1d4fc822 693 Pfam PF00270 DEAD/DEAH box helicase 271 433 2.8E-19 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DA442_00820 1f6684a3a0879acdc4d9943f1d4fc822 693 Pfam PF00271 Helicase conserved C-terminal domain 480 588 6.2E-17 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_00820 1f6684a3a0879acdc4d9943f1d4fc822 693 SUPERFAMILY SSF52540 292 653 5.09E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_00820 1f6684a3a0879acdc4d9943f1d4fc822 693 Gene3D G3DSA:3.40.50.300 457 630 2.0E-52 T 14-10-2018 DA442_00820 1f6684a3a0879acdc4d9943f1d4fc822 693 SUPERFAMILY SSF52540 200 453 7.65E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_00820 1f6684a3a0879acdc4d9943f1d4fc822 693 Gene3D G3DSA:3.40.50.300 208 450 3.3E-83 T 14-10-2018 DA442_00820 1f6684a3a0879acdc4d9943f1d4fc822 693 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 29 664 1.0E-238 T 14-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 DA442_00820 1f6684a3a0879acdc4d9943f1d4fc822 693 SMART SM00490 505 589 1.7E-21 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_21665 8d8536416c7206562e8100bb45d518dd 196 SUPERFAMILY SSF51120 3 169 7.48E-24 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DA442_21665 8d8536416c7206562e8100bb45d518dd 196 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 63 81 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site DA442_21665 8d8536416c7206562e8100bb45d518dd 196 Gene3D G3DSA:2.150.10.10 69 194 2.3E-17 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DA442_21665 8d8536416c7206562e8100bb45d518dd 196 PRINTS PR00313 NodO calcium binding signature 76 84 2.1E-12 T 14-10-2018 DA442_21665 8d8536416c7206562e8100bb45d518dd 196 PRINTS PR00313 NodO calcium binding signature 94 103 2.1E-12 T 14-10-2018 DA442_21665 8d8536416c7206562e8100bb45d518dd 196 PRINTS PR00313 NodO calcium binding signature 46 57 2.1E-12 T 14-10-2018 DA442_21665 8d8536416c7206562e8100bb45d518dd 196 PRINTS PR00313 NodO calcium binding signature 58 66 2.1E-12 T 14-10-2018 DA442_21665 8d8536416c7206562e8100bb45d518dd 196 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 45 63 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site DA442_21665 8d8536416c7206562e8100bb45d518dd 196 Gene3D G3DSA:2.150.10.10 2 68 1.3E-8 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DA442_21665 8d8536416c7206562e8100bb45d518dd 196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 67 83 0.18 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DA442_21665 8d8536416c7206562e8100bb45d518dd 196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 103 118 0.24 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DA442_21665 8d8536416c7206562e8100bb45d518dd 196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 48 65 8.7E-5 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DA442_21665 8d8536416c7206562e8100bb45d518dd 196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3 16 9.6 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DA442_21665 8d8536416c7206562e8100bb45d518dd 196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 85 101 4.4 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DA442_21665 8d8536416c7206562e8100bb45d518dd 196 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 24 37 3.5 T 14-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 DA442_22695 7e7acc17732594335e7cdf2a67b21ec3 307 Gene3D G3DSA:3.40.50.1980 139 306 6.6E-46 T 14-10-2018 DA442_22695 7e7acc17732594335e7cdf2a67b21ec3 307 Pfam PF01497 Periplasmic binding protein 52 281 1.0E-28 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain DA442_22695 7e7acc17732594335e7cdf2a67b21ec3 307 SUPERFAMILY SSF53807 31 291 1.53E-56 T 14-10-2018 DA442_22695 7e7acc17732594335e7cdf2a67b21ec3 307 Gene3D G3DSA:3.40.50.1980 28 137 1.6E-28 T 14-10-2018 DA442_13525 184bf9ab9e9e80410ff1a0cce6dbcd1c 165 TIGRFAM TIGR00608 radc: DNA repair protein RadC 26 165 6.2E-45 T 14-10-2018 IPR001405 Uncharacterised protein family UPF0758 DA442_13525 184bf9ab9e9e80410ff1a0cce6dbcd1c 165 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 114 119 - T 14-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site DA442_13525 184bf9ab9e9e80410ff1a0cce6dbcd1c 165 Gene3D G3DSA:3.40.140.10 41 165 2.7E-45 T 14-10-2018 DA442_13525 184bf9ab9e9e80410ff1a0cce6dbcd1c 165 Pfam PF04002 RadC-like JAB domain 44 163 2.2E-44 T 14-10-2018 IPR025657 RadC-like JAB domain DA442_13525 184bf9ab9e9e80410ff1a0cce6dbcd1c 165 SUPERFAMILY SSF102712 57 132 1.44E-6 T 14-10-2018 DA442_21235 3c42c2fb19b9be3f567eb0085160c034 428 Gene3D G3DSA:1.10.287.130 162 278 2.4E-23 T 14-10-2018 DA442_21235 3c42c2fb19b9be3f567eb0085160c034 428 SUPERFAMILY SSF55874 266 428 1.01E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_21235 3c42c2fb19b9be3f567eb0085160c034 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 383 4.2E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_21235 3c42c2fb19b9be3f567eb0085160c034 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 355 369 4.2E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_21235 3c42c2fb19b9be3f567eb0085160c034 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 408 4.2E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_21235 3c42c2fb19b9be3f567eb0085160c034 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 427 4.2E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_21235 3c42c2fb19b9be3f567eb0085160c034 428 SMART SM00387 320 428 5.8E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_21235 3c42c2fb19b9be3f567eb0085160c034 428 Gene3D G3DSA:3.30.565.10 281 428 3.3E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_21235 3c42c2fb19b9be3f567eb0085160c034 428 Pfam PF00512 His Kinase A (phospho-acceptor) domain 214 275 3.6E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_21235 3c42c2fb19b9be3f567eb0085160c034 428 SMART SM00388 211 276 9.0E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_21235 3c42c2fb19b9be3f567eb0085160c034 428 SMART SM00304 158 210 1.1E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_21235 3c42c2fb19b9be3f567eb0085160c034 428 SUPERFAMILY SSF47384 194 276 1.28E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DA442_21235 3c42c2fb19b9be3f567eb0085160c034 428 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 321 427 7.1E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_00700 0faac9abd49143049d651a6a5f3bad8c 500 Gene3D G3DSA:3.30.450.90 88 225 1.1E-55 T 14-10-2018 DA442_00700 0faac9abd49143049d651a6a5f3bad8c 500 SMART SM00382 253 376 5.4E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_00700 0faac9abd49143049d651a6a5f3bad8c 500 Gene3D G3DSA:3.40.50.300 227 500 7.4E-126 T 14-10-2018 DA442_00700 0faac9abd49143049d651a6a5f3bad8c 500 Pfam PF00437 Type II/IV secretion system protein 127 392 2.5E-91 T 14-10-2018 IPR001482 Type II/IV secretion system protein DA442_00700 0faac9abd49143049d651a6a5f3bad8c 500 SUPERFAMILY SSF160246 12 78 2.88E-17 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily DA442_00700 0faac9abd49143049d651a6a5f3bad8c 500 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 320 334 - T 14-10-2018 IPR001482 Type II/IV secretion system protein DA442_00700 0faac9abd49143049d651a6a5f3bad8c 500 Gene3D G3DSA:3.30.300.160 1 78 1.4E-39 T 14-10-2018 DA442_00700 0faac9abd49143049d651a6a5f3bad8c 500 SUPERFAMILY SSF52540 107 497 1.28E-105 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_00700 0faac9abd49143049d651a6a5f3bad8c 500 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 12 497 1.2E-226 T 14-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 DA442_14225 c93da49104a81b95edf0d02ac183fbe5 622 SUPERFAMILY SSF52777 380 621 2.67E-81 T 14-10-2018 DA442_14225 c93da49104a81b95edf0d02ac183fbe5 622 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 178 622 4.0E-208 T 14-10-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 DA442_14225 c93da49104a81b95edf0d02ac183fbe5 622 Gene3D G3DSA:2.40.50.100 104 181 6.1E-20 T 14-10-2018 DA442_14225 c93da49104a81b95edf0d02ac183fbe5 622 Gene3D G3DSA:2.40.50.100 196 274 1.6E-20 T 14-10-2018 DA442_14225 c93da49104a81b95edf0d02ac183fbe5 622 Gene3D G3DSA:2.40.50.100 1 80 8.3E-22 T 14-10-2018 DA442_14225 c93da49104a81b95edf0d02ac183fbe5 622 SUPERFAMILY SSF51230 104 196 4.45E-23 T 14-10-2018 IPR011053 Single hybrid motif DA442_14225 c93da49104a81b95edf0d02ac183fbe5 622 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 DA442_14225 c93da49104a81b95edf0d02ac183fbe5 622 SUPERFAMILY SSF51230 197 289 3.01E-23 T 14-10-2018 IPR011053 Single hybrid motif DA442_14225 c93da49104a81b95edf0d02ac183fbe5 622 Gene3D G3DSA:4.10.320.10 316 361 8.7E-21 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 DA442_14225 c93da49104a81b95edf0d02ac183fbe5 622 Pfam PF02817 e3 binding domain 317 351 3.3E-14 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 DA442_14225 c93da49104a81b95edf0d02ac183fbe5 622 SUPERFAMILY SSF51230 1 94 5.89E-24 T 14-10-2018 IPR011053 Single hybrid motif DA442_14225 c93da49104a81b95edf0d02ac183fbe5 622 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 391 621 4.7E-80 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 DA442_14225 c93da49104a81b95edf0d02ac183fbe5 622 SUPERFAMILY SSF47005 311 355 9.42E-13 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 DA442_14225 c93da49104a81b95edf0d02ac183fbe5 622 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 127 156 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 DA442_14225 c93da49104a81b95edf0d02ac183fbe5 622 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 220 249 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 DA442_14225 c93da49104a81b95edf0d02ac183fbe5 622 Pfam PF00364 Biotin-requiring enzyme 198 268 2.3E-21 T 14-10-2018 IPR000089 Biotin/lipoyl attachment DA442_14225 c93da49104a81b95edf0d02ac183fbe5 622 Pfam PF00364 Biotin-requiring enzyme 105 175 3.3E-20 T 14-10-2018 IPR000089 Biotin/lipoyl attachment DA442_14225 c93da49104a81b95edf0d02ac183fbe5 622 Pfam PF00364 Biotin-requiring enzyme 4 73 4.4E-21 T 14-10-2018 IPR000089 Biotin/lipoyl attachment DA442_14225 c93da49104a81b95edf0d02ac183fbe5 622 Gene3D G3DSA:3.30.559.10 375 622 5.7E-97 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 DA442_10795 ddc666185e3bd362d9ac0b42648f4c41 529 SUPERFAMILY SSF47090 206 285 4.0E-12 T 14-10-2018 IPR036365 PGBD-like superfamily DA442_10795 ddc666185e3bd362d9ac0b42648f4c41 529 Pfam PF01471 Putative peptidoglycan binding domain 245 276 4.4E-8 T 14-10-2018 IPR002477 Peptidoglycan binding-like DA442_10795 ddc666185e3bd362d9ac0b42648f4c41 529 Pfam PF03734 L,D-transpeptidase catalytic domain 304 470 4.2E-30 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 DA442_10795 ddc666185e3bd362d9ac0b42648f4c41 529 SUPERFAMILY SSF141523 303 464 6.8E-20 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like DA442_17090 69b53ad31a0c86f45246eb0d6367de46 497 Pfam PF02541 Ppx/GppA phosphatase family 23 303 7.3E-88 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 DA442_17090 69b53ad31a0c86f45246eb0d6367de46 497 SUPERFAMILY SSF109604 309 494 9.42E-40 T 14-10-2018 DA442_17090 69b53ad31a0c86f45246eb0d6367de46 497 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 4 495 53.207 T 14-10-2018 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 DA442_17090 69b53ad31a0c86f45246eb0d6367de46 497 Gene3D G3DSA:3.30.420.150 114 291 6.9E-83 T 14-10-2018 DA442_17090 69b53ad31a0c86f45246eb0d6367de46 497 SUPERFAMILY SSF53067 9 129 3.45E-36 T 14-10-2018 DA442_17090 69b53ad31a0c86f45246eb0d6367de46 497 PIRSF PIRSF001267 1 497 5.2E-177 T 14-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 DA442_17090 69b53ad31a0c86f45246eb0d6367de46 497 Gene3D G3DSA:3.30.420.40 11 299 6.9E-83 T 14-10-2018 DA442_17090 69b53ad31a0c86f45246eb0d6367de46 497 SUPERFAMILY SSF53067 134 305 5.77E-43 T 14-10-2018 DA442_17090 69b53ad31a0c86f45246eb0d6367de46 497 Gene3D G3DSA:1.10.3210.10 306 497 1.3E-44 T 14-10-2018 DA442_23995 321b78b50c3cc234695ddc0eeda3ec9a 206 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 126 204 2.5E-20 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 DA442_23995 321b78b50c3cc234695ddc0eeda3ec9a 206 SUPERFAMILY SSF74653 119 196 1.2E-23 T 14-10-2018 DA442_23995 321b78b50c3cc234695ddc0eeda3ec9a 206 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 127 204 2.9E-17 T 14-10-2018 IPR006260 TonB/TolA, C-terminal DA442_23995 321b78b50c3cc234695ddc0eeda3ec9a 206 Gene3D G3DSA:3.30.1150.10 103 205 6.1E-27 T 14-10-2018 DA442_23995 321b78b50c3cc234695ddc0eeda3ec9a 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 63 73 2.6E-16 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 DA442_23995 321b78b50c3cc234695ddc0eeda3ec9a 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 161 178 2.6E-16 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 DA442_23995 321b78b50c3cc234695ddc0eeda3ec9a 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 121 142 2.6E-16 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 DA442_23995 321b78b50c3cc234695ddc0eeda3ec9a 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 142 160 2.6E-16 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 DA442_12385 036c0c0b8bc2ca918538a630524da6ac 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 7.0E-16 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 DA442_12385 036c0c0b8bc2ca918538a630524da6ac 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 7.0E-16 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 DA442_12385 036c0c0b8bc2ca918538a630524da6ac 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 7.0E-16 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 DA442_12385 036c0c0b8bc2ca918538a630524da6ac 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 7.0E-16 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 DA442_12385 036c0c0b8bc2ca918538a630524da6ac 260 Pfam PF01311 Bacterial export proteins, family 1 13 243 7.9E-56 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 DA442_12385 036c0c0b8bc2ca918538a630524da6ac 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 12 256 3.5E-74 T 14-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 DA442_13400 996424ef49340b8bc251e7c71a8472c2 239 Gene3D G3DSA:3.40.50.1580 1 237 6.5E-76 T 14-10-2018 DA442_13400 996424ef49340b8bc251e7c71a8472c2 239 Pfam PF01048 Phosphorylase superfamily 15 217 3.0E-41 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 DA442_13400 996424ef49340b8bc251e7c71a8472c2 239 SUPERFAMILY SSF53167 3 234 9.03E-93 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 DA442_13400 996424ef49340b8bc251e7c71a8472c2 239 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 14-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 DA442_13400 996424ef49340b8bc251e7c71a8472c2 239 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.688 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 DA442_13400 996424ef49340b8bc251e7c71a8472c2 239 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 4.5E-119 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 DA442_00720 fed31ec05311fc7c9809cd6bd0a491b9 111 SUPERFAMILY SSF54523 31 109 7.46E-23 T 14-10-2018 DA442_00720 fed31ec05311fc7c9809cd6bd0a491b9 111 Gene3D G3DSA:3.30.1300.30 24 111 1.4E-35 T 14-10-2018 DA442_00720 fed31ec05311fc7c9809cd6bd0a491b9 111 Pfam PF02501 Type II secretion system (T2SS), protein I 34 109 1.3E-21 T 14-10-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 DA442_00720 fed31ec05311fc7c9809cd6bd0a491b9 111 TIGRFAM TIGR01707 gspI: type II secretion system protein I 1 97 2.4E-35 T 14-10-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 DA442_00335 a3971ec9afe39d993718ae91d229a6cd 458 PIRSF PIRSF002746 9 458 9.8E-145 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 DA442_00335 a3971ec9afe39d993718ae91d229a6cd 458 Pfam PF02447 GntP family permease 14 456 1.8E-117 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 DA442_00335 a3971ec9afe39d993718ae91d229a6cd 458 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 15 457 5.2E-107 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 DA442_12920 b57e40ea94eaa9e0e2c9b0e9bb6f6472 354 Gene3D G3DSA:2.30.40.20 15 72 1.3E-26 T 14-10-2018 DA442_12920 b57e40ea94eaa9e0e2c9b0e9bb6f6472 354 SUPERFAMILY SSF100879 245 353 1.06E-24 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DA442_12920 b57e40ea94eaa9e0e2c9b0e9bb6f6472 354 Pfam PF00817 impB/mucB/samB family 11 158 2.1E-47 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DA442_12920 b57e40ea94eaa9e0e2c9b0e9bb6f6472 354 Pfam PF11798 IMS family HHH motif 170 200 7.9E-6 T 14-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 DA442_12920 b57e40ea94eaa9e0e2c9b0e9bb6f6472 354 Gene3D G3DSA:3.30.1490.100 241 353 2.7E-26 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DA442_12920 b57e40ea94eaa9e0e2c9b0e9bb6f6472 354 Gene3D G3DSA:3.30.70.270 73 173 1.3E-37 T 14-10-2018 DA442_12920 b57e40ea94eaa9e0e2c9b0e9bb6f6472 354 SUPERFAMILY SSF56672 4 238 4.8E-92 T 14-10-2018 DA442_12920 b57e40ea94eaa9e0e2c9b0e9bb6f6472 354 Pfam PF11799 impB/mucB/samB family C-terminal domain 241 341 5.0E-6 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DA442_12920 b57e40ea94eaa9e0e2c9b0e9bb6f6472 354 Gene3D G3DSA:1.10.150.20 174 232 1.9E-15 T 14-10-2018 DA442_12920 b57e40ea94eaa9e0e2c9b0e9bb6f6472 354 Hamap MF_01113 DNA polymerase IV [dinB]. 5 353 36.67 T 14-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 DA442_18135 160e4b2b926b322d66324fcdbd01a697 157 Gene3D G3DSA:2.60.40.1890 37 151 5.5E-38 T 14-10-2018 IPR036182 Copper chaperone PCuAC superfamily DA442_18135 160e4b2b926b322d66324fcdbd01a697 157 SUPERFAMILY SSF110087 7 149 5.1E-50 T 14-10-2018 IPR036182 Copper chaperone PCuAC superfamily DA442_18135 160e4b2b926b322d66324fcdbd01a697 157 Pfam PF04314 Copper chaperone PCu(A)C 33 141 3.2E-38 T 14-10-2018 IPR007410 Copper chaperone PCuAC DA442_03340 1078241dc5e82d3a5f482c987455f67e 294 Gene3D G3DSA:2.60.200.30 129 266 1.9E-94 T 14-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 DA442_03340 1078241dc5e82d3a5f482c987455f67e 294 SUPERFAMILY SSF111331 8 290 4.45E-94 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily DA442_03340 1078241dc5e82d3a5f482c987455f67e 294 Pfam PF01513 ATP-NAD kinase 8 273 6.2E-72 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 DA442_03340 1078241dc5e82d3a5f482c987455f67e 294 Hamap MF_00361 NAD kinase [nadK]. 6 289 34.571 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 DA442_03340 1078241dc5e82d3a5f482c987455f67e 294 Gene3D G3DSA:3.40.50.10330 23 289 1.9E-94 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 DA442_11135 b092c684fd0f9fd63293cf42469a0a80 777 SMART SM00729 367 617 1.6E-4 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DA442_11135 b092c684fd0f9fd63293cf42469a0a80 777 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 371 391 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 DA442_11135 b092c684fd0f9fd63293cf42469a0a80 777 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 24 636 1.2E-262 T 14-10-2018 IPR022946 Uncharacterised protein family UPF0313 DA442_11135 b092c684fd0f9fd63293cf42469a0a80 777 Pfam PF08497 Radical SAM N-terminal 24 370 1.1E-142 T 14-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal DA442_11135 b092c684fd0f9fd63293cf42469a0a80 777 Pfam PF04055 Radical SAM superfamily 371 576 6.9E-20 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DA442_11135 b092c684fd0f9fd63293cf42469a0a80 777 Pfam PF11842 Domain of unknown function (DUF3362) 585 723 1.7E-42 T 14-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal DA442_11135 b092c684fd0f9fd63293cf42469a0a80 777 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 24 638 49.088 T 14-10-2018 IPR022946 Uncharacterised protein family UPF0313 DA442_11135 b092c684fd0f9fd63293cf42469a0a80 777 Gene3D G3DSA:3.80.30.20 366 630 2.1E-13 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe DA442_11135 b092c684fd0f9fd63293cf42469a0a80 777 SUPERFAMILY SSF102114 370 605 4.58E-11 T 14-10-2018 DA442_17300 fbd04d9b235484bee244eaf921cfd876 377 Gene3D G3DSA:3.30.470.20 162 375 5.8E-72 T 14-10-2018 DA442_17300 fbd04d9b235484bee244eaf921cfd876 377 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 2 350 7.8E-105 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 DA442_17300 fbd04d9b235484bee244eaf921cfd876 377 SUPERFAMILY SSF51246 299 371 2.51E-19 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 DA442_17300 fbd04d9b235484bee244eaf921cfd876 377 Gene3D G3DSA:3.40.50.20 1 79 1.4E-17 T 14-10-2018 DA442_17300 fbd04d9b235484bee244eaf921cfd876 377 Pfam PF02222 ATP-grasp domain 101 274 5.7E-51 T 14-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type DA442_17300 fbd04d9b235484bee244eaf921cfd876 377 SUPERFAMILY SSF56059 92 295 1.94E-55 T 14-10-2018 DA442_17300 fbd04d9b235484bee244eaf921cfd876 377 Gene3D G3DSA:3.30.1490.20 107 161 1.7E-16 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DA442_17300 fbd04d9b235484bee244eaf921cfd876 377 SUPERFAMILY SSF52440 1 88 1.12E-16 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DA442_17300 fbd04d9b235484bee244eaf921cfd876 377 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 2 346 36.828 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 DA442_15030 59d7b9f21bc93df80b6b9c5185e389ab 502 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 497 40.914 T 14-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 DA442_15030 59d7b9f21bc93df80b6b9c5185e389ab 502 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 349 356 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 DA442_15030 59d7b9f21bc93df80b6b9c5185e389ab 502 SUPERFAMILY SSF52949 1 184 6.47E-52 T 14-10-2018 DA442_15030 59d7b9f21bc93df80b6b9c5185e389ab 502 SUPERFAMILY SSF53187 179 496 5.34E-125 T 14-10-2018 DA442_15030 59d7b9f21bc93df80b6b9c5185e389ab 502 Gene3D G3DSA:3.40.630.10 181 497 2.2E-141 T 14-10-2018 DA442_15030 59d7b9f21bc93df80b6b9c5185e389ab 502 Gene3D G3DSA:3.40.220.10 1 159 3.1E-59 T 14-10-2018 DA442_15030 59d7b9f21bc93df80b6b9c5185e389ab 502 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 187 489 1.2E-123 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 DA442_15030 59d7b9f21bc93df80b6b9c5185e389ab 502 PRINTS PR00481 Cytosol aminopeptidase signature 345 365 4.8E-55 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DA442_15030 59d7b9f21bc93df80b6b9c5185e389ab 502 PRINTS PR00481 Cytosol aminopeptidase signature 286 307 4.8E-55 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DA442_15030 59d7b9f21bc93df80b6b9c5185e389ab 502 PRINTS PR00481 Cytosol aminopeptidase signature 323 344 4.8E-55 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DA442_15030 59d7b9f21bc93df80b6b9c5185e389ab 502 PRINTS PR00481 Cytosol aminopeptidase signature 264 281 4.8E-55 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DA442_15030 59d7b9f21bc93df80b6b9c5185e389ab 502 PRINTS PR00481 Cytosol aminopeptidase signature 373 388 4.8E-55 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DA442_15030 59d7b9f21bc93df80b6b9c5185e389ab 502 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 9.7E-34 T 14-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 DA442_22170 4cd40a45c5224c4931ab3066f4c79b52 696 Gene3D G3DSA:3.40.30.60 358 501 1.2E-44 T 14-10-2018 DA442_22170 4cd40a45c5224c4931ab3066f4c79b52 696 Pfam PF00771 FHIPEP family 25 687 5.6E-242 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DA442_22170 4cd40a45c5224c4931ab3066f4c79b52 696 Gene3D G3DSA:1.10.8.540 502 589 7.3E-13 T 14-10-2018 DA442_22170 4cd40a45c5224c4931ab3066f4c79b52 696 PIRSF PIRSF005419 2 696 4.5E-222 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DA442_22170 4cd40a45c5224c4931ab3066f4c79b52 696 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 141 164 - T 14-10-2018 IPR025505 FHIPEP conserved site DA442_22170 4cd40a45c5224c4931ab3066f4c79b52 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 155 173 6.2E-55 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DA442_22170 4cd40a45c5224c4931ab3066f4c79b52 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 236 250 6.2E-55 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DA442_22170 4cd40a45c5224c4931ab3066f4c79b52 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 136 152 6.2E-55 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DA442_22170 4cd40a45c5224c4931ab3066f4c79b52 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 32 45 6.2E-55 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DA442_22170 4cd40a45c5224c4931ab3066f4c79b52 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 185 202 6.2E-55 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DA442_22170 4cd40a45c5224c4931ab3066f4c79b52 696 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 69 88 6.2E-55 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DA442_22170 4cd40a45c5224c4931ab3066f4c79b52 696 Gene3D G3DSA:1.10.490.80 592 695 1.3E-9 T 14-10-2018 DA442_22170 4cd40a45c5224c4931ab3066f4c79b52 696 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 16 694 5.7E-236 T 14-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 DA442_13150 a7e053452e580c5f6ac54f5b17fb3960 456 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 439 4.0E-235 T 14-10-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 DA442_13150 a7e053452e580c5f6ac54f5b17fb3960 456 Gene3D G3DSA:1.20.1250.20 18 227 6.9E-58 T 14-10-2018 DA442_13150 a7e053452e580c5f6ac54f5b17fb3960 456 Gene3D G3DSA:1.20.1250.20 241 452 2.3E-63 T 14-10-2018 DA442_13150 a7e053452e580c5f6ac54f5b17fb3960 456 Pfam PF07690 Major Facilitator Superfamily 34 401 1.2E-50 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DA442_13150 a7e053452e580c5f6ac54f5b17fb3960 456 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 14-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 DA442_13150 a7e053452e580c5f6ac54f5b17fb3960 456 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 418 2.8E-150 T 14-10-2018 DA442_13150 a7e053452e580c5f6ac54f5b17fb3960 456 SUPERFAMILY SSF103473 13 451 1.15E-87 T 14-10-2018 IPR036259 MFS transporter superfamily DA442_13150 a7e053452e580c5f6ac54f5b17fb3960 456 PIRSF PIRSF002808 5 453 8.3E-170 T 14-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 DA442_15165 75ed7b0fa3ce1962d44e75b2902963ea 488 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 466 473 - T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DA442_15165 75ed7b0fa3ce1962d44e75b2902963ea 488 PIRSF PIRSF000774 1 488 1.1E-152 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DA442_15165 75ed7b0fa3ce1962d44e75b2902963ea 488 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 375 394 - T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DA442_15165 75ed7b0fa3ce1962d44e75b2902963ea 488 Pfam PF04552 Sigma-54, DNA binding domain 328 486 3.8E-72 T 14-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding DA442_15165 75ed7b0fa3ce1962d44e75b2902963ea 488 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 485 2.2E-157 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DA442_15165 75ed7b0fa3ce1962d44e75b2902963ea 488 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 49 5.9E-17 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DA442_15165 75ed7b0fa3ce1962d44e75b2902963ea 488 Gene3D G3DSA:1.10.10.1330 129 247 2.0E-25 T 14-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily DA442_15165 75ed7b0fa3ce1962d44e75b2902963ea 488 PRINTS PR00045 Sigma-54 factor signature 403 414 7.6E-32 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DA442_15165 75ed7b0fa3ce1962d44e75b2902963ea 488 PRINTS PR00045 Sigma-54 factor signature 387 399 7.6E-32 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DA442_15165 75ed7b0fa3ce1962d44e75b2902963ea 488 PRINTS PR00045 Sigma-54 factor signature 199 216 7.6E-32 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DA442_15165 75ed7b0fa3ce1962d44e75b2902963ea 488 PRINTS PR00045 Sigma-54 factor signature 461 479 7.6E-32 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DA442_15165 75ed7b0fa3ce1962d44e75b2902963ea 488 Gene3D G3DSA:1.10.10.60 428 485 2.3E-23 T 14-10-2018 DA442_15165 75ed7b0fa3ce1962d44e75b2902963ea 488 Pfam PF04963 Sigma-54 factor, core binding domain 127 316 5.1E-61 T 14-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 DA442_18340 effa42d9317341d4d844bbfcd92b42f1 299 Pfam PF00781 Diacylglycerol kinase catalytic domain 7 125 1.3E-28 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 DA442_18340 effa42d9317341d4d844bbfcd92b42f1 299 Hamap MF_01377 Probable lipid kinase YegS [yegS]. 3 298 43.57 T 14-10-2018 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 DA442_18340 effa42d9317341d4d844bbfcd92b42f1 299 SMART SM00046 3 130 4.8E-14 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 DA442_18340 effa42d9317341d4d844bbfcd92b42f1 299 Gene3D G3DSA:2.60.200.40 123 283 8.1E-79 T 14-10-2018 DA442_18340 effa42d9317341d4d844bbfcd92b42f1 299 SUPERFAMILY SSF111331 1 295 1.9E-75 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily DA442_18340 effa42d9317341d4d844bbfcd92b42f1 299 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 4 292 1.2E-63 T 14-10-2018 IPR005218 Diacylglycerol/lipid kinase DA442_18340 effa42d9317341d4d844bbfcd92b42f1 299 Gene3D G3DSA:3.40.50.10330 22 286 8.1E-79 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 DA442_17140 09cebf31fb567d432c3a3848ad9631bc 724 Gene3D G3DSA:1.10.486.10 383 539 3.9E-132 T 14-10-2018 DA442_17140 09cebf31fb567d432c3a3848ad9631bc 724 Pfam PF13361 UvrD-like helicase C-terminal domain 278 617 3.8E-80 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 DA442_17140 09cebf31fb567d432c3a3848ad9631bc 724 SUPERFAMILY SSF52540 8 643 1.93E-180 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_17140 09cebf31fb567d432c3a3848ad9631bc 724 Gene3D G3DSA:3.40.50.300 282 637 3.9E-132 T 14-10-2018 DA442_17140 09cebf31fb567d432c3a3848ad9631bc 724 Gene3D G3DSA:1.10.10.160 115 188 2.1E-98 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily DA442_17140 09cebf31fb567d432c3a3848ad9631bc 724 TIGRFAM TIGR01075 uvrD: DNA helicase II 7 722 0.0 T 14-10-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 DA442_17140 09cebf31fb567d432c3a3848ad9631bc 724 Gene3D G3DSA:3.40.50.300 11 274 2.1E-98 T 14-10-2018 DA442_17140 09cebf31fb567d432c3a3848ad9631bc 724 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 272 3.0E-75 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 DA442_21230 b65bbf69b9d85a0805e6fa277ee66e84 237 SMART SM00862 154 230 6.0E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DA442_21230 b65bbf69b9d85a0805e6fa277ee66e84 237 SMART SM00448 8 118 2.0E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_21230 b65bbf69b9d85a0805e6fa277ee66e84 237 SUPERFAMILY SSF52172 8 130 1.39E-36 T 14-10-2018 IPR011006 CheY-like superfamily DA442_21230 b65bbf69b9d85a0805e6fa277ee66e84 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 230 5.3E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DA442_21230 b65bbf69b9d85a0805e6fa277ee66e84 237 Pfam PF00072 Response regulator receiver domain 11 119 1.0E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_21230 b65bbf69b9d85a0805e6fa277ee66e84 237 Gene3D G3DSA:3.40.50.2300 1 124 3.2E-33 T 14-10-2018 DA442_21230 b65bbf69b9d85a0805e6fa277ee66e84 237 Gene3D G3DSA:1.10.10.10 125 237 2.4E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_21230 b65bbf69b9d85a0805e6fa277ee66e84 237 SUPERFAMILY SSF46894 136 232 4.82E-24 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DA442_00015 398cd26a122831a76bc212e7f5bfd8fe 359 ProSitePatterns PS00618 RecF protein signature 2. 299 317 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 DA442_00015 398cd26a122831a76bc212e7f5bfd8fe 359 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 359 98.487 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 DA442_00015 398cd26a122831a76bc212e7f5bfd8fe 359 ProSitePatterns PS00617 RecF protein signature 1. 118 138 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 DA442_00015 398cd26a122831a76bc212e7f5bfd8fe 359 SUPERFAMILY SSF52540 1 344 1.39E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_00015 398cd26a122831a76bc212e7f5bfd8fe 359 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 354 1.4E-37 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal DA442_00015 398cd26a122831a76bc212e7f5bfd8fe 359 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 356 2.3E-120 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 DA442_00015 398cd26a122831a76bc212e7f5bfd8fe 359 Gene3D G3DSA:1.20.1050.90 121 298 1.9E-82 T 14-10-2018 DA442_00015 398cd26a122831a76bc212e7f5bfd8fe 359 Gene3D G3DSA:3.40.50.300 8 332 1.9E-82 T 14-10-2018 DA442_17730 54eda76006e80c1e1701c28bb213d732 382 SUPERFAMILY SSF56796 5 381 7.07E-138 T 14-10-2018 DA442_17730 54eda76006e80c1e1701c28bb213d732 382 Gene3D G3DSA:1.20.1090.10 184 382 7.4E-79 T 14-10-2018 DA442_17730 54eda76006e80c1e1701c28bb213d732 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 374 7.3E-129 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 DA442_17730 54eda76006e80c1e1701c28bb213d732 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 DA442_17730 54eda76006e80c1e1701c28bb213d732 382 Gene3D G3DSA:3.40.50.1970 2 183 9.6E-58 T 14-10-2018 DA442_17730 54eda76006e80c1e1701c28bb213d732 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 DA442_16480 619eb202eb9ac29e2427830e89acdbfc 522 Gene3D G3DSA:1.10.10.10 5 105 3.1E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_16480 619eb202eb9ac29e2427830e89acdbfc 522 SUPERFAMILY SSF48452 338 485 3.25E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_16480 619eb202eb9ac29e2427830e89acdbfc 522 SUPERFAMILY SSF46894 6 103 8.79E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DA442_16480 619eb202eb9ac29e2427830e89acdbfc 522 Pfam PF00486 Transcriptional regulatory protein, C terminal 25 100 4.0E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DA442_16480 619eb202eb9ac29e2427830e89acdbfc 522 Gene3D G3DSA:1.25.40.10 353 515 1.5E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_16480 619eb202eb9ac29e2427830e89acdbfc 522 SMART SM00862 24 100 1.8E-14 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DA442_07755 0ebd4fbea91fd467efca0ac37c3f85f8 935 SUPERFAMILY SSF53067 223 456 1.43E-21 T 14-10-2018 DA442_07755 0ebd4fbea91fd467efca0ac37c3f85f8 935 Pfam PF00012 Hsp70 protein 83 314 1.7E-16 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DA442_07755 0ebd4fbea91fd467efca0ac37c3f85f8 935 Pfam PF12531 DNA-K related protein 685 932 5.1E-101 T 14-10-2018 IPR021030 Protein of unknown function DUF3731 DA442_07755 0ebd4fbea91fd467efca0ac37c3f85f8 935 SUPERFAMILY SSF53067 6 209 6.48E-30 T 14-10-2018 DA442_07755 0ebd4fbea91fd467efca0ac37c3f85f8 935 PRINTS PR00301 70kDa heat shock protein signature 165 185 2.9E-9 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DA442_07755 0ebd4fbea91fd467efca0ac37c3f85f8 935 PRINTS PR00301 70kDa heat shock protein signature 398 418 2.9E-9 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DA442_07755 0ebd4fbea91fd467efca0ac37c3f85f8 935 PRINTS PR00301 70kDa heat shock protein signature 232 242 2.9E-9 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DA442_07755 0ebd4fbea91fd467efca0ac37c3f85f8 935 PRINTS PR00301 70kDa heat shock protein signature 6 19 2.9E-9 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DA442_18240 b2348000c3f36723dbc14646ffdcf041 151 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 150 3.0E-65 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 DA442_18240 b2348000c3f36723dbc14646ffdcf041 151 Gene3D G3DSA:3.40.50.1380 1 151 2.4E-66 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily DA442_18240 b2348000c3f36723dbc14646ffdcf041 151 SMART SM00851 25 118 3.2E-23 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain DA442_18240 b2348000c3f36723dbc14646ffdcf041 151 Pfam PF02142 MGS-like domain 25 118 2.6E-18 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain DA442_18240 b2348000c3f36723dbc14646ffdcf041 151 PIRSF PIRSF006614 8 151 4.8E-64 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 DA442_18240 b2348000c3f36723dbc14646ffdcf041 151 SUPERFAMILY SSF52335 3 150 2.9E-58 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily DA442_18240 b2348000c3f36723dbc14646ffdcf041 151 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 73 - T 14-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 DA442_18240 b2348000c3f36723dbc14646ffdcf041 151 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 32.954 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 DA442_15515 4171665033d825ecd2fe15909e386090 326 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 87 105 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 DA442_15515 4171665033d825ecd2fe15909e386090 326 Pfam PF01207 Dihydrouridine synthase (Dus) 9 315 9.8E-96 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 DA442_15515 4171665033d825ecd2fe15909e386090 326 Gene3D G3DSA:1.20.120.1460 250 325 1.6E-23 T 14-10-2018 DA442_15515 4171665033d825ecd2fe15909e386090 326 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 322 53.671 T 14-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 DA442_15515 4171665033d825ecd2fe15909e386090 326 Gene3D G3DSA:3.20.20.70 4 245 3.4E-73 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_15515 4171665033d825ecd2fe15909e386090 326 PIRSF PIRSF006621 1 323 2.4E-76 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 DA442_15515 4171665033d825ecd2fe15909e386090 326 SUPERFAMILY SSF51395 6 319 1.22E-75 T 14-10-2018 DA442_15515 4171665033d825ecd2fe15909e386090 326 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 6 320 5.0E-162 T 14-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 DA442_07960 e7578488333481ffaa1a9f12f6043434 203 Pfam PF00677 Lumazine binding domain 100 184 2.6E-21 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DA442_07960 e7578488333481ffaa1a9f12f6043434 203 Pfam PF00677 Lumazine binding domain 3 87 8.1E-21 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DA442_07960 e7578488333481ffaa1a9f12f6043434 203 Gene3D G3DSA:2.40.30.20 94 190 7.7E-29 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DA442_07960 e7578488333481ffaa1a9f12f6043434 203 Gene3D G3DSA:2.40.30.20 1 89 8.9E-31 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DA442_07960 e7578488333481ffaa1a9f12f6043434 203 PIRSF PIRSF000498 1 203 1.4E-67 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DA442_07960 e7578488333481ffaa1a9f12f6043434 203 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 202 3.8E-75 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DA442_07960 e7578488333481ffaa1a9f12f6043434 203 SUPERFAMILY SSF63380 93 198 1.87E-30 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DA442_07960 e7578488333481ffaa1a9f12f6043434 203 SUPERFAMILY SSF63380 1 93 2.64E-25 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DA442_17210 87684f31759f751e9a10b0127f3a2894 646 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 143 596 99.506 T 14-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 DA442_17210 87684f31759f751e9a10b0127f3a2894 646 Pfam PF01964 Radical SAM ThiC family 144 592 5.7E-199 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 DA442_17210 87684f31759f751e9a10b0127f3a2894 646 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 143 594 3.4E-219 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 DA442_17210 87684f31759f751e9a10b0127f3a2894 646 Gene3D G3DSA:3.20.20.540 214 527 1.8E-154 T 14-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 DA442_17210 87684f31759f751e9a10b0127f3a2894 646 Pfam PF13667 ThiC-associated domain 22 104 8.2E-34 T 14-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 DA442_18665 867ab44d4565e2a3dc3ea768258cc5ef 152 Pfam PF00293 NUDIX domain 12 124 2.4E-19 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DA442_18665 867ab44d4565e2a3dc3ea768258cc5ef 152 Gene3D G3DSA:3.90.79.10 6 141 5.3E-26 T 14-10-2018 DA442_18665 867ab44d4565e2a3dc3ea768258cc5ef 152 SUPERFAMILY SSF55811 9 139 2.71E-26 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DA442_24215 54c5d38febe832d7fdaca061dedef9ad 451 SMART SM00267 283 450 2.9E-47 T 14-10-2018 IPR000160 GGDEF domain DA442_24215 54c5d38febe832d7fdaca061dedef9ad 451 Pfam PF03924 CHASE domain 109 211 8.9E-15 T 14-10-2018 IPR006189 CHASE domain DA442_24215 54c5d38febe832d7fdaca061dedef9ad 451 Gene3D G3DSA:3.30.70.270 290 451 1.4E-50 T 14-10-2018 DA442_24215 54c5d38febe832d7fdaca061dedef9ad 451 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 293 450 1.9E-47 T 14-10-2018 IPR000160 GGDEF domain DA442_24215 54c5d38febe832d7fdaca061dedef9ad 451 SUPERFAMILY SSF55073 299 451 1.65E-43 T 14-10-2018 IPR029787 Nucleotide cyclase DA442_24215 54c5d38febe832d7fdaca061dedef9ad 451 SMART SM01079 47 223 1.3E-28 T 14-10-2018 IPR006189 CHASE domain DA442_24215 54c5d38febe832d7fdaca061dedef9ad 451 Pfam PF00990 Diguanylate cyclase, GGDEF domain 294 451 1.1E-43 T 14-10-2018 IPR000160 GGDEF domain DA442_12865 1a219fc9de3661e94a8fade5d68d9a7d 86 Pfam PF01197 Ribosomal protein L31 1 79 1.7E-27 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_12865 1a219fc9de3661e94a8fade5d68d9a7d 86 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.0E-16 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_12865 1a219fc9de3661e94a8fade5d68d9a7d 86 PRINTS PR01249 Ribosomal protein L31 signature 45 60 1.0E-16 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_12865 1a219fc9de3661e94a8fade5d68d9a7d 86 PRINTS PR01249 Ribosomal protein L31 signature 60 78 1.0E-16 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_12865 1a219fc9de3661e94a8fade5d68d9a7d 86 SUPERFAMILY SSF143800 1 81 2.31E-23 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_12865 1a219fc9de3661e94a8fade5d68d9a7d 86 Gene3D G3DSA:2.30.170.50 1 84 1.7E-24 T 14-10-2018 DA442_12865 1a219fc9de3661e94a8fade5d68d9a7d 86 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 81 29.769 T 14-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_12865 1a219fc9de3661e94a8fade5d68d9a7d 86 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_12865 1a219fc9de3661e94a8fade5d68d9a7d 86 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 80 6.8E-19 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_04250 a6aab8192032ade9581dacf15ab3a008 275 SUPERFAMILY SSF51735 1 271 1.75E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_04250 a6aab8192032ade9581dacf15ab3a008 275 Gene3D G3DSA:3.40.50.720 2 264 4.0E-58 T 14-10-2018 DA442_04250 a6aab8192032ade9581dacf15ab3a008 275 Pfam PF00106 short chain dehydrogenase 3 187 3.3E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_04250 a6aab8192032ade9581dacf15ab3a008 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.2E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_04250 a6aab8192032ade9581dacf15ab3a008 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 2.2E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_04250 a6aab8192032ade9581dacf15ab3a008 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 2.2E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_04250 a6aab8192032ade9581dacf15ab3a008 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 2.2E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_04250 a6aab8192032ade9581dacf15ab3a008 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 2.2E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_04250 a6aab8192032ade9581dacf15ab3a008 275 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DA442_19455 a8845accf174c7bd3e82f89da1a94e3e 484 SMART SM00388 276 343 5.0E-5 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_19455 a8845accf174c7bd3e82f89da1a94e3e 484 Gene3D G3DSA:1.10.287.130 283 340 4.7E-17 T 14-10-2018 DA442_19455 a8845accf174c7bd3e82f89da1a94e3e 484 SUPERFAMILY SSF47384 271 340 8.83E-7 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DA442_19455 a8845accf174c7bd3e82f89da1a94e3e 484 Pfam PF11884 Domain of unknown function (DUF3404) 17 275 4.0E-112 T 14-10-2018 IPR021821 Protein of unknown function DUF3404 DA442_19455 a8845accf174c7bd3e82f89da1a94e3e 484 Gene3D G3DSA:3.30.565.10 341 476 4.7E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_19455 a8845accf174c7bd3e82f89da1a94e3e 484 Pfam PF00512 His Kinase A (phospho-acceptor) domain 281 332 2.6E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_19455 a8845accf174c7bd3e82f89da1a94e3e 484 SUPERFAMILY SSF55874 347 479 1.64E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_19455 a8845accf174c7bd3e82f89da1a94e3e 484 SMART SM00387 381 479 2.4E-10 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_19455 a8845accf174c7bd3e82f89da1a94e3e 484 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 386 477 8.7E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_19695 4719b450f3af0464240f23135c6751d3 169 Gene3D G3DSA:3.40.630.30 1 165 2.2E-38 T 14-10-2018 DA442_19695 4719b450f3af0464240f23135c6751d3 169 SUPERFAMILY SSF55729 2 156 3.92E-37 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_19695 4719b450f3af0464240f23135c6751d3 169 Pfam PF13302 Acetyltransferase (GNAT) domain 8 148 1.3E-26 T 14-10-2018 IPR000182 GNAT domain DA442_11140 c8461ba8bd0b822110c02a342d9d982f 698 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 456 485 6.2E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DA442_11140 c8461ba8bd0b822110c02a342d9d982f 698 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 562 591 6.2E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DA442_11140 c8461ba8bd0b822110c02a342d9d982f 698 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 533 560 6.2E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DA442_11140 c8461ba8bd0b822110c02a342d9d982f 698 Gene3D G3DSA:1.10.287.950 366 698 1.6E-65 T 14-10-2018 DA442_11140 c8461ba8bd0b822110c02a342d9d982f 698 SMART SM00304 366 420 2.7E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_11140 c8461ba8bd0b822110c02a342d9d982f 698 SMART SM00283 435 696 7.7E-60 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_11140 c8461ba8bd0b822110c02a342d9d982f 698 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 502 662 4.1E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_11140 c8461ba8bd0b822110c02a342d9d982f 698 Gene3D G3DSA:3.30.450.20 72 226 4.6E-22 T 14-10-2018 DA442_11140 c8461ba8bd0b822110c02a342d9d982f 698 SUPERFAMILY SSF58104 388 697 3.79E-71 T 14-10-2018 DA442_11140 c8461ba8bd0b822110c02a342d9d982f 698 Gene3D G3DSA:3.30.450.20 68 322 4.6E-22 T 14-10-2018 DA442_11335 2471a0d715867211a67525e45915e435 222 Pfam PF09335 SNARE associated Golgi protein 62 177 4.6E-18 T 14-10-2018 IPR032816 SNARE associated Golgi protein DA442_25105 378caf984e4403937b7f6de6f2c01738 289 Gene3D G3DSA:1.10.10.10 1 79 1.3E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_25105 378caf984e4403937b7f6de6f2c01738 289 SUPERFAMILY SSF46785 1 107 9.47E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_25105 378caf984e4403937b7f6de6f2c01738 289 Gene3D G3DSA:3.40.190.10 174 249 4.6E-8 T 14-10-2018 DA442_25105 378caf984e4403937b7f6de6f2c01738 289 SUPERFAMILY SSF53850 89 284 1.19E-28 T 14-10-2018 DA442_25105 378caf984e4403937b7f6de6f2c01738 289 Gene3D G3DSA:3.40.190.10 80 169 9.9E-14 T 14-10-2018 DA442_25105 378caf984e4403937b7f6de6f2c01738 289 Pfam PF03466 LysR substrate binding domain 88 283 5.2E-29 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_25105 378caf984e4403937b7f6de6f2c01738 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 6.3E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_18085 fa1a040ad34ab4d97184a5c56333f7b3 190 Gene3D G3DSA:2.60.130.10 5 190 1.9E-43 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 DA442_18085 fa1a040ad34ab4d97184a5c56333f7b3 190 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 61 89 - T 14-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 DA442_18085 fa1a040ad34ab4d97184a5c56333f7b3 190 SUPERFAMILY SSF49482 17 189 1.83E-47 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 DA442_18085 fa1a040ad34ab4d97184a5c56333f7b3 190 Pfam PF00775 Dioxygenase 32 156 3.0E-22 T 14-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 DA442_01115 ecbfc21fa46de0e1ffd2d5bc68bc39ce 239 Gene3D G3DSA:3.90.550.10 3 234 2.2E-63 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DA442_01115 ecbfc21fa46de0e1ffd2d5bc68bc39ce 239 SUPERFAMILY SSF53448 6 233 4.28E-51 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DA442_01115 ecbfc21fa46de0e1ffd2d5bc68bc39ce 239 Pfam PF02348 Cytidylyltransferase 9 224 8.8E-30 T 14-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 DA442_12570 12a44dac49b3b54c7ffa24125afeed2c 180 SUPERFAMILY SSF55021 1 82 2.14E-18 T 14-10-2018 DA442_12570 12a44dac49b3b54c7ffa24125afeed2c 180 Gene3D G3DSA:3.30.70.260 87 180 1.1E-40 T 14-10-2018 DA442_12570 12a44dac49b3b54c7ffa24125afeed2c 180 PIRSF PIRSF028103 1 178 2.9E-70 T 14-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 DA442_12570 12a44dac49b3b54c7ffa24125afeed2c 180 SUPERFAMILY SSF55021 90 176 1.07E-21 T 14-10-2018 DA442_12570 12a44dac49b3b54c7ffa24125afeed2c 180 Pfam PF13740 ACT domain 3 78 3.0E-23 T 14-10-2018 DA442_12570 12a44dac49b3b54c7ffa24125afeed2c 180 Gene3D G3DSA:3.30.70.260 1 85 7.0E-25 T 14-10-2018 DA442_04320 2664654dc28981d351aa6c39a648dec8 320 Pfam PF00762 Ferrochelatase 6 319 4.5E-111 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 DA442_04320 2664654dc28981d351aa6c39a648dec8 320 Hamap MF_00323 Ferrochelatase [hemH]. 5 320 38.657 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 DA442_04320 2664654dc28981d351aa6c39a648dec8 320 ProSitePatterns PS00534 Ferrochelatase signature. 189 207 - T 14-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 DA442_04320 2664654dc28981d351aa6c39a648dec8 320 TIGRFAM TIGR00109 hemH: ferrochelatase 4 320 1.3E-106 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 DA442_04320 2664654dc28981d351aa6c39a648dec8 320 SUPERFAMILY SSF53800 4 319 1.96E-106 T 14-10-2018 DA442_04320 2664654dc28981d351aa6c39a648dec8 320 Gene3D G3DSA:3.40.50.1400 163 301 1.1E-95 T 14-10-2018 DA442_04320 2664654dc28981d351aa6c39a648dec8 320 Gene3D G3DSA:3.40.50.1400 8 320 1.1E-95 T 14-10-2018 DA442_23090 3cf93171a4bb5e3881e3fae3d4ddda8d 408 Gene3D G3DSA:3.40.50.300 143 275 9.8E-8 T 14-10-2018 DA442_23090 3cf93171a4bb5e3881e3fae3d4ddda8d 408 SUPERFAMILY SSF52172 5 186 6.4E-39 T 14-10-2018 IPR011006 CheY-like superfamily DA442_23090 3cf93171a4bb5e3881e3fae3d4ddda8d 408 Gene3D G3DSA:1.10.10.60 345 403 7.5E-8 T 14-10-2018 DA442_23090 3cf93171a4bb5e3881e3fae3d4ddda8d 408 Gene3D G3DSA:1.10.8.60 277 344 2.5E-10 T 14-10-2018 DA442_23090 3cf93171a4bb5e3881e3fae3d4ddda8d 408 Gene3D G3DSA:3.40.50.2300 2 136 9.3E-35 T 14-10-2018 DA442_23090 3cf93171a4bb5e3881e3fae3d4ddda8d 408 Pfam PF02954 Bacterial regulatory protein, Fis family 360 398 1.5E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DA442_23090 3cf93171a4bb5e3881e3fae3d4ddda8d 408 Pfam PF00072 Response regulator receiver domain 5 114 1.8E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_23090 3cf93171a4bb5e3881e3fae3d4ddda8d 408 SUPERFAMILY SSF52540 144 334 5.8E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_23090 3cf93171a4bb5e3881e3fae3d4ddda8d 408 SMART SM00448 3 114 4.5E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_23090 3cf93171a4bb5e3881e3fae3d4ddda8d 408 SUPERFAMILY SSF46689 350 401 4.39E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_04095 22d32a1a6936c870ac9754db8b2c7ec3 437 Gene3D G3DSA:2.60.98.20 154 318 2.3E-22 T 14-10-2018 IPR037058 Flagellar hook protein FlgE superfamily DA442_04095 22d32a1a6936c870ac9754db8b2c7ec3 437 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 2 419 4.6E-96 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G DA442_04095 22d32a1a6936c870ac9754db8b2c7ec3 437 SUPERFAMILY SSF117143 78 398 1.02E-68 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like DA442_04095 22d32a1a6936c870ac9754db8b2c7ec3 437 Pfam PF00460 Flagella basal body rod protein 3 32 7.3E-11 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 DA442_04095 22d32a1a6936c870ac9754db8b2c7ec3 437 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 8 28 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site DA442_04095 22d32a1a6936c870ac9754db8b2c7ec3 437 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 358 436 1.1E-15 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DA442_04095 22d32a1a6936c870ac9754db8b2c7ec3 437 Pfam PF07559 Flagellar basal body protein FlaE 181 317 4.1E-22 T 14-10-2018 IPR011491 Flagellar hook protein FlgE DA442_17330 adec882b7f9b1886752745337827d526 315 Gene3D G3DSA:3.10.25.10 210 314 3.6E-37 T 14-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DA442_17330 adec882b7f9b1886752745337827d526 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 310 8.2E-109 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 DA442_17330 adec882b7f9b1886752745337827d526 315 Gene3D G3DSA:3.40.50.170 1 209 7.9E-88 T 14-10-2018 DA442_17330 adec882b7f9b1886752745337827d526 315 Pfam PF00551 Formyl transferase 6 182 1.7E-47 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DA442_17330 adec882b7f9b1886752745337827d526 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 303 2.2E-29 T 14-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DA442_17330 adec882b7f9b1886752745337827d526 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 306 36.961 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 DA442_17330 adec882b7f9b1886752745337827d526 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 14-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DA442_17330 adec882b7f9b1886752745337827d526 315 SUPERFAMILY SSF53328 5 210 1.19E-67 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DA442_17330 adec882b7f9b1886752745337827d526 315 SUPERFAMILY SSF50486 208 310 4.71E-33 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 DA442_11240 8e1b8aa0c0a80195d5dfbd415fe9be12 163 Pfam PF00583 Acetyltransferase (GNAT) family 59 143 5.3E-12 T 14-10-2018 IPR000182 GNAT domain DA442_11240 8e1b8aa0c0a80195d5dfbd415fe9be12 163 Gene3D G3DSA:3.40.630.30 24 153 5.1E-38 T 14-10-2018 DA442_11240 8e1b8aa0c0a80195d5dfbd415fe9be12 163 SUPERFAMILY SSF55729 35 153 1.83E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_22470 3d16ff171a3937764fd1efc9b3e749c7 374 Pfam PF01546 Peptidase family M20/M25/M40 73 370 1.9E-24 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 DA442_22470 3d16ff171a3937764fd1efc9b3e749c7 374 PIRSF PIRSF037238 1 373 1.2E-147 T 14-10-2018 IPR017150 Peptidase M20, glutamate carboxypeptidase DA442_22470 3d16ff171a3937764fd1efc9b3e749c7 374 SUPERFAMILY SSF55031 177 282 1.01E-24 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DA442_22470 3d16ff171a3937764fd1efc9b3e749c7 374 Gene3D G3DSA:3.30.70.360 177 286 6.8E-104 T 14-10-2018 DA442_22470 3d16ff171a3937764fd1efc9b3e749c7 374 Gene3D G3DSA:3.40.630.10 11 361 6.8E-104 T 14-10-2018 DA442_22470 3d16ff171a3937764fd1efc9b3e749c7 374 SUPERFAMILY SSF53187 2 373 6.57E-43 T 14-10-2018 DA442_22470 3d16ff171a3937764fd1efc9b3e749c7 374 Pfam PF07687 Peptidase dimerisation domain 175 274 2.5E-22 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain DA442_14570 c2c93ca3c83b26bf1f16020d8e621d53 320 Gene3D G3DSA:3.30.200.100 218 317 3.1E-28 T 14-10-2018 IPR038484 MucB/RseB, C-terminal domain superfamily DA442_14570 c2c93ca3c83b26bf1f16020d8e621d53 320 Pfam PF03888 MucB/RseB N-terminal domain 26 195 2.4E-57 T 14-10-2018 IPR033434 MucB/RseB, N-terminal DA442_14570 c2c93ca3c83b26bf1f16020d8e621d53 320 PIRSF PIRSF005427 1 318 1.5E-82 T 14-10-2018 IPR005588 MucB/RseB DA442_14570 c2c93ca3c83b26bf1f16020d8e621d53 320 Pfam PF17188 MucB/RseB C-terminal domain 218 311 8.2E-28 T 14-10-2018 IPR033436 MucB/RseB, C-terminal DA442_14570 c2c93ca3c83b26bf1f16020d8e621d53 320 Gene3D G3DSA:2.50.20.10 24 208 9.3E-51 T 14-10-2018 DA442_02175 4c092b7ed54d966c985e72cf71367073 442 Gene3D G3DSA:1.10.287.950 113 442 2.0E-68 T 14-10-2018 DA442_02175 4c092b7ed54d966c985e72cf71367073 442 SUPERFAMILY SSF58104 133 442 2.22E-75 T 14-10-2018 DA442_02175 4c092b7ed54d966c985e72cf71367073 442 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 92 112 3.5E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DA442_02175 4c092b7ed54d966c985e72cf71367073 442 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 307 336 3.5E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DA442_02175 4c092b7ed54d966c985e72cf71367073 442 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 278 305 3.5E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DA442_02175 4c092b7ed54d966c985e72cf71367073 442 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 226 408 1.6E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_02175 4c092b7ed54d966c985e72cf71367073 442 SMART SM00283 180 441 2.1E-69 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_20015 18477a9de8a426274dc98791dc6b89d7 497 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 21 493 2.5E-200 T 14-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath DA442_20015 18477a9de8a426274dc98791dc6b89d7 497 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 64 493 1.3E-183 T 14-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath DA442_16135 aa3a371a811f9d93e2065a0605d6de4a 323 Gene3D G3DSA:3.30.930.10 1 322 9.8E-110 T 14-10-2018 DA442_16135 aa3a371a811f9d93e2065a0605d6de4a 323 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 1 323 53.267 T 14-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 DA442_16135 aa3a371a811f9d93e2065a0605d6de4a 323 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 14 318 2.5E-128 T 14-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 DA442_16135 aa3a371a811f9d93e2065a0605d6de4a 323 Pfam PF00152 tRNA synthetases class II (D, K and N) 12 319 4.6E-45 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DA442_16135 aa3a371a811f9d93e2065a0605d6de4a 323 SUPERFAMILY SSF55681 11 320 8.48E-81 T 14-10-2018 DA442_06570 5f8749d7a450ffa5238688076c266fe9 183 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 18 183 2.1E-71 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DA442_06570 5f8749d7a450ffa5238688076c266fe9 183 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 95 181 3.1E-37 T 14-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 DA442_06570 5f8749d7a450ffa5238688076c266fe9 183 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 12 183 29.865 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DA442_06570 5f8749d7a450ffa5238688076c266fe9 183 SUPERFAMILY SSF54364 16 90 4.58E-26 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DA442_06570 5f8749d7a450ffa5238688076c266fe9 183 Gene3D G3DSA:3.30.110.10 88 183 3.7E-39 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 DA442_06570 5f8749d7a450ffa5238688076c266fe9 183 ProSitePatterns PS00938 Initiation factor 3 signature. 70 83 - T 14-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 DA442_06570 5f8749d7a450ffa5238688076c266fe9 183 SUPERFAMILY SSF55200 95 183 4.05E-34 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 DA442_06570 5f8749d7a450ffa5238688076c266fe9 183 Gene3D G3DSA:3.10.20.80 12 87 2.2E-29 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DA442_06570 5f8749d7a450ffa5238688076c266fe9 183 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 18 88 1.5E-27 T 14-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DA442_22650 ecef96dfa8cfd630e8c6f5ac09e4545a 402 Gene3D G3DSA:1.20.1720.10 9 383 6.5E-81 T 14-10-2018 DA442_22650 ecef96dfa8cfd630e8c6f5ac09e4545a 402 PRINTS PR01035 Tetracycline resistance protein signature 135 157 1.1E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DA442_22650 ecef96dfa8cfd630e8c6f5ac09e4545a 402 PRINTS PR01035 Tetracycline resistance protein signature 19 35 1.1E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DA442_22650 ecef96dfa8cfd630e8c6f5ac09e4545a 402 PRINTS PR01035 Tetracycline resistance protein signature 303 323 1.1E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DA442_22650 ecef96dfa8cfd630e8c6f5ac09e4545a 402 SUPERFAMILY SSF103473 2 387 3.92E-58 T 14-10-2018 IPR036259 MFS transporter superfamily DA442_22650 ecef96dfa8cfd630e8c6f5ac09e4545a 402 Pfam PF07690 Major Facilitator Superfamily 15 346 6.3E-44 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DA442_02400 265ea90d24455f825a11d5bd63a3101f 908 Pfam PF07517 SecA DEAD-like domain 7 403 7.7E-134 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 DA442_02400 265ea90d24455f825a11d5bd63a3101f 908 SMART SM00957 6 403 0.0 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 DA442_02400 265ea90d24455f825a11d5bd63a3101f 908 Pfam PF07516 SecA Wing and Scaffold domain 617 829 2.5E-66 T 14-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 DA442_02400 265ea90d24455f825a11d5bd63a3101f 908 SUPERFAMILY SSF52540 5 416 2.56E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_02400 265ea90d24455f825a11d5bd63a3101f 908 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 20.082 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DA442_02400 265ea90d24455f825a11d5bd63a3101f 908 Pfam PF02810 SEC-C motif 888 906 2.0E-10 T 14-10-2018 IPR004027 SEC-C motif DA442_02400 265ea90d24455f825a11d5bd63a3101f 908 ProSitePatterns PS01312 SecA family signature. 501 516 - T 14-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 DA442_02400 265ea90d24455f825a11d5bd63a3101f 908 SUPERFAMILY SSF52540 418 610 4.29E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_02400 265ea90d24455f825a11d5bd63a3101f 908 SUPERFAMILY SSF81767 227 369 1.16E-42 T 14-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 DA442_02400 265ea90d24455f825a11d5bd63a3101f 908 Gene3D G3DSA:3.40.50.300 418 620 2.4E-87 T 14-10-2018 DA442_02400 265ea90d24455f825a11d5bd63a3101f 908 SUPERFAMILY SSF81886 620 896 1.06E-83 T 14-10-2018 IPR036266 SecA, Wing/Scaffold superfamily DA442_02400 265ea90d24455f825a11d5bd63a3101f 908 Gene3D G3DSA:3.90.1440.10 229 369 1.0E-176 T 14-10-2018 DA442_02400 265ea90d24455f825a11d5bd63a3101f 908 Gene3D G3DSA:1.10.3060.10 621 833 4.9E-76 T 14-10-2018 DA442_02400 265ea90d24455f825a11d5bd63a3101f 908 PRINTS PR00906 SecA protein signature 101 115 3.2E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DA442_02400 265ea90d24455f825a11d5bd63a3101f 908 PRINTS PR00906 SecA protein signature 414 427 3.2E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DA442_02400 265ea90d24455f825a11d5bd63a3101f 908 PRINTS PR00906 SecA protein signature 117 127 3.2E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DA442_02400 265ea90d24455f825a11d5bd63a3101f 908 PRINTS PR00906 SecA protein signature 170 190 3.2E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DA442_02400 265ea90d24455f825a11d5bd63a3101f 908 PRINTS PR00906 SecA protein signature 340 362 3.2E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DA442_02400 265ea90d24455f825a11d5bd63a3101f 908 PRINTS PR00906 SecA protein signature 377 394 3.2E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DA442_02400 265ea90d24455f825a11d5bd63a3101f 908 PRINTS PR00906 SecA protein signature 63 87 3.2E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DA442_02400 265ea90d24455f825a11d5bd63a3101f 908 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 816 0.0 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DA442_02400 265ea90d24455f825a11d5bd63a3101f 908 Gene3D G3DSA:3.40.50.300 22 416 1.0E-176 T 14-10-2018 DA442_02400 265ea90d24455f825a11d5bd63a3101f 908 SMART SM00958 228 359 2.8E-82 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 DA442_02400 265ea90d24455f825a11d5bd63a3101f 908 Pfam PF01043 SecA preprotein cross-linking domain 232 359 1.3E-38 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 DA442_06730 030980eb85c735251a4c619d148942b7 255 SMART SM00382 22 217 3.6E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_06730 030980eb85c735251a4c619d148942b7 255 Gene3D G3DSA:3.40.50.300 8 254 1.3E-51 T 14-10-2018 DA442_06730 030980eb85c735251a4c619d148942b7 255 SUPERFAMILY SSF52540 16 231 3.39E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_06730 030980eb85c735251a4c619d148942b7 255 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 1 255 45.009 T 14-10-2018 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 DA442_06730 030980eb85c735251a4c619d148942b7 255 Pfam PF00005 ABC transporter 15 168 6.7E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_21150 3169a356eda4ce11bc2ef183c41ee205 425 SUPERFAMILY SSF51556 54 372 3.66E-107 T 14-10-2018 IPR032466 Metal-dependent hydrolase DA442_21150 3169a356eda4ce11bc2ef183c41ee205 425 Pfam PF07969 Amidohydrolase family 42 403 4.1E-58 T 14-10-2018 IPR013108 Amidohydrolase 3 DA442_21150 3169a356eda4ce11bc2ef183c41ee205 425 SUPERFAMILY SSF51338 1 76 3.02E-8 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DA442_21150 3169a356eda4ce11bc2ef183c41ee205 425 Gene3D G3DSA:3.20.20.140 55 362 4.3E-179 T 14-10-2018 DA442_21150 3169a356eda4ce11bc2ef183c41ee205 425 Gene3D G3DSA:2.30.40.10 8 409 4.3E-179 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DA442_17960 5e326a587893a1656272b7b7f7e1b484 534 Pfam PF01039 Carboxyl transferase domain 48 523 1.5E-148 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 DA442_17960 5e326a587893a1656272b7b7f7e1b484 534 SUPERFAMILY SSF52096 278 534 3.62E-84 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DA442_17960 5e326a587893a1656272b7b7f7e1b484 534 SUPERFAMILY SSF52096 23 269 3.66E-71 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DA442_17960 5e326a587893a1656272b7b7f7e1b484 534 Gene3D G3DSA:3.90.226.10 1 269 3.6E-93 T 14-10-2018 DA442_17960 5e326a587893a1656272b7b7f7e1b484 534 Gene3D G3DSA:3.90.226.10 273 534 2.6E-100 T 14-10-2018 DA442_12415 d322587f86365bd32cf0bffb1f54e0e2 167 Pfam PF03748 Flagellar basal body-associated protein FliL 66 167 2.6E-19 T 14-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 DA442_06085 45ec8748384ca6fff94c707c5e942832 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 403 432 6.0E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DA442_06085 45ec8748384ca6fff94c707c5e942832 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 304 333 6.0E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DA442_06085 45ec8748384ca6fff94c707c5e942832 539 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 322 504 1.5E-43 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_06085 45ec8748384ca6fff94c707c5e942832 539 SMART SM00283 276 537 3.6E-72 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_06085 45ec8748384ca6fff94c707c5e942832 539 SMART SM00304 208 261 3.8E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_06085 45ec8748384ca6fff94c707c5e942832 539 Gene3D G3DSA:1.10.287.950 207 539 7.2E-73 T 14-10-2018 DA442_06085 45ec8748384ca6fff94c707c5e942832 539 SUPERFAMILY SSF58104 234 538 3.92E-72 T 14-10-2018 DA442_06085 45ec8748384ca6fff94c707c5e942832 539 Pfam PF00672 HAMP domain 209 256 1.2E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_19590 a58e9cc4ad1198ef4050f16ff3fe0e09 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 22 37 2.4E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DA442_19590 a58e9cc4ad1198ef4050f16ff3fe0e09 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 54 69 2.4E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DA442_19590 a58e9cc4ad1198ef4050f16ff3fe0e09 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 69 84 2.4E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DA442_19590 a58e9cc4ad1198ef4050f16ff3fe0e09 102 Pfam PF12840 Helix-turn-helix domain 19 76 9.9E-7 T 14-10-2018 DA442_19590 a58e9cc4ad1198ef4050f16ff3fe0e09 102 Gene3D G3DSA:1.10.10.10 7 102 7.2E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_19590 a58e9cc4ad1198ef4050f16ff3fe0e09 102 SUPERFAMILY SSF46785 14 101 5.85E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_19590 a58e9cc4ad1198ef4050f16ff3fe0e09 102 SMART SM00418 20 98 1.9E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DA442_19980 77d019d5bb977bc45941f9d6f0ea7f1f 159 SUPERFAMILY SSF141452 4 157 9.68E-36 T 14-10-2018 IPR036624 Hcp1-like superfamily DA442_19980 77d019d5bb977bc45941f9d6f0ea7f1f 159 Pfam PF05638 Type VI secretion system effector, Hcp 6 133 5.0E-28 T 14-10-2018 IPR008514 Type VI secretion system effector, Hcp DA442_19980 77d019d5bb977bc45941f9d6f0ea7f1f 159 Gene3D G3DSA:2.30.110.20 2 158 1.1E-33 T 14-10-2018 IPR036624 Hcp1-like superfamily DA442_16755 54de640041d032bba39dddc8aada554c 284 Gene3D G3DSA:3.40.50.150 21 267 6.5E-21 T 14-10-2018 DA442_16755 54de640041d032bba39dddc8aada554c 284 SUPERFAMILY SSF53335 33 266 5.4E-36 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_16755 54de640041d032bba39dddc8aada554c 284 PIRSF PIRSF028177 17 284 8.9E-70 T 14-10-2018 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 DA442_16755 54de640041d032bba39dddc8aada554c 284 Pfam PF04072 Leucine carboxyl methyltransferase 84 222 2.4E-8 T 14-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 DA442_05535 ad60105371bf2163c90bca752abc4289 353 Gene3D G3DSA:3.40.50.10800 115 340 5.7E-94 T 14-10-2018 DA442_05535 ad60105371bf2163c90bca752abc4289 353 Gene3D G3DSA:3.40.50.10800 200 295 5.7E-94 T 14-10-2018 DA442_05535 ad60105371bf2163c90bca752abc4289 353 Gene3D G3DSA:3.40.50.10800 32 322 5.7E-94 T 14-10-2018 DA442_05535 ad60105371bf2163c90bca752abc4289 353 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 29 341 4.0E-115 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 DA442_05535 ad60105371bf2163c90bca752abc4289 353 Pfam PF02445 Quinolinate synthetase A protein 32 340 4.8E-102 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 DA442_05535 ad60105371bf2163c90bca752abc4289 353 SUPERFAMILY SSF142754 29 341 8.24E-106 T 14-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 DA442_05535 ad60105371bf2163c90bca752abc4289 353 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 66.67 T 14-10-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 DA442_20760 8a99424efed85b660dacddd460fc7c79 333 Gene3D G3DSA:1.10.10.60 9 59 2.9E-18 T 14-10-2018 DA442_20760 8a99424efed85b660dacddd460fc7c79 333 Pfam PF04198 Putative sugar-binding domain 66 320 4.5E-78 T 14-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 DA442_20760 8a99424efed85b660dacddd460fc7c79 333 Gene3D G3DSA:3.40.50.1360 60 325 1.5E-80 T 14-10-2018 DA442_20760 8a99424efed85b660dacddd460fc7c79 333 SUPERFAMILY SSF100950 70 320 3.18E-64 T 14-10-2018 IPR037171 NagB/RpiA transferase-like DA442_10440 fb4bdbc047b0da3fe76b9605e260447f 95 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 88 4.2E-15 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family DA442_10440 fb4bdbc047b0da3fe76b9605e260447f 95 Gene3D G3DSA:3.30.2310.20 1 92 5.1E-17 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily DA442_03330 5e57f6f8503090f74ec4d8d5344e9b8c 554 PIRSF PIRSF003128 1 554 4.1E-162 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 DA442_03330 5e57f6f8503090f74ec4d8d5344e9b8c 554 SUPERFAMILY SSF52540 1 513 7.48E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_03330 5e57f6f8503090f74ec4d8d5344e9b8c 554 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 551 1.8E-174 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 DA442_03330 5e57f6f8503090f74ec4d8d5344e9b8c 554 Gene3D G3DSA:3.40.50.300 1 248 2.6E-47 T 14-10-2018 DA442_03330 5e57f6f8503090f74ec4d8d5344e9b8c 554 Gene3D G3DSA:3.40.50.300 249 553 2.2E-52 T 14-10-2018 DA442_03330 5e57f6f8503090f74ec4d8d5344e9b8c 554 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 507 4.7E-17 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal DA442_05500 bd8fedddb1f5b9b93a25268b4776dc63 139 PIRSF PIRSF003230 2 138 4.2E-47 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 DA442_05500 bd8fedddb1f5b9b93a25268b4776dc63 139 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 8 131 7.0E-50 T 14-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 DA442_05500 bd8fedddb1f5b9b93a25268b4776dc63 139 Gene3D G3DSA:3.10.129.10 2 138 4.2E-42 T 14-10-2018 DA442_05500 bd8fedddb1f5b9b93a25268b4776dc63 139 SUPERFAMILY SSF54637 5 132 5.32E-42 T 14-10-2018 IPR029069 HotDog domain superfamily DA442_05500 bd8fedddb1f5b9b93a25268b4776dc63 139 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 12 127 1.3E-37 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 DA442_05500 bd8fedddb1f5b9b93a25268b4776dc63 139 Pfam PF03061 Thioesterase superfamily 22 106 6.9E-18 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 DA442_16600 96118cd06073aeecf8d5ce715d47f0b7 126 Hamap MF_00422 Protein translocase subunit SecE [secE]. 67 122 13.517 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DA442_16600 96118cd06073aeecf8d5ce715d47f0b7 126 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 70 122 9.6E-18 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 DA442_16600 96118cd06073aeecf8d5ce715d47f0b7 126 Gene3D G3DSA:1.20.5.1030 67 123 1.2E-17 T 14-10-2018 IPR038379 SecE superfamily DA442_16600 96118cd06073aeecf8d5ce715d47f0b7 126 PRINTS PR01650 Bacterial translocase SecE signature 66 86 2.9E-41 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 DA442_16600 96118cd06073aeecf8d5ce715d47f0b7 126 PRINTS PR01650 Bacterial translocase SecE signature 90 110 2.9E-41 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 DA442_16600 96118cd06073aeecf8d5ce715d47f0b7 126 PRINTS PR01650 Bacterial translocase SecE signature 45 66 2.9E-41 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 DA442_16600 96118cd06073aeecf8d5ce715d47f0b7 126 PRINTS PR01650 Bacterial translocase SecE signature 110 126 2.9E-41 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 DA442_16600 96118cd06073aeecf8d5ce715d47f0b7 126 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 71 121 5.6E-21 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DA442_16600 96118cd06073aeecf8d5ce715d47f0b7 126 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 72 100 - T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DA442_15950 16001a182864b63beba7f81d5107d9d2 326 SMART SM00244 18 218 5.4E-49 T 14-10-2018 IPR001107 Band 7 domain DA442_15950 16001a182864b63beba7f81d5107d9d2 326 SUPERFAMILY SSF117892 56 223 2.88E-21 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily DA442_15950 16001a182864b63beba7f81d5107d9d2 326 TIGRFAM TIGR01932 hflC: HflC protein 1 318 1.1E-136 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 DA442_15950 16001a182864b63beba7f81d5107d9d2 326 Pfam PF01145 SPFH domain / Band 7 family 22 233 1.1E-29 T 14-10-2018 IPR001107 Band 7 domain DA442_15950 16001a182864b63beba7f81d5107d9d2 326 PIRSF PIRSF005651 1 326 5.5E-96 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 DA442_01280 14603edf216e2adac91c731a46275faa 151 Pfam PF00293 NUDIX domain 18 144 4.1E-15 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DA442_01280 14603edf216e2adac91c731a46275faa 151 SUPERFAMILY SSF55811 3 148 1.18E-27 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DA442_01280 14603edf216e2adac91c731a46275faa 151 PIRSF PIRSF037599 1 151 4.9E-68 T 14-10-2018 IPR033715 GDP-mannose mannosyl hydrolase GO:0008727 DA442_01280 14603edf216e2adac91c731a46275faa 151 ProSitePatterns PS00893 Nudix box signature. 50 71 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DA442_01280 14603edf216e2adac91c731a46275faa 151 Gene3D G3DSA:3.90.79.10 1 151 2.5E-37 T 14-10-2018 DA442_20880 2a73983c817f44d5fbcdb9403384ef4c 829 Pfam PF01568 Molydopterin dinucleotide binding domain 714 822 2.4E-27 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 DA442_20880 2a73983c817f44d5fbcdb9403384ef4c 829 Pfam PF00384 Molybdopterin oxidoreductase 98 570 1.5E-87 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DA442_20880 2a73983c817f44d5fbcdb9403384ef4c 829 Hamap MF_01630 Periplasmic nitrate reductase [napA]. 1 828 32.504 T 14-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 DA442_20880 2a73983c817f44d5fbcdb9403384ef4c 829 SUPERFAMILY SSF50692 689 828 3.32E-42 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily DA442_20880 2a73983c817f44d5fbcdb9403384ef4c 829 Gene3D G3DSA:3.40.228.10 177 702 0.0 T 14-10-2018 DA442_20880 2a73983c817f44d5fbcdb9403384ef4c 829 SUPERFAMILY SSF53706 38 659 1.44E-199 T 14-10-2018 DA442_20880 2a73983c817f44d5fbcdb9403384ef4c 829 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 46 63 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 DA442_20880 2a73983c817f44d5fbcdb9403384ef4c 829 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 2 828 0.0 T 14-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 DA442_20880 2a73983c817f44d5fbcdb9403384ef4c 829 Gene3D G3DSA:2.40.40.20 705 828 2.2E-45 T 14-10-2018 DA442_20880 2a73983c817f44d5fbcdb9403384ef4c 829 Gene3D G3DSA:3.40.50.740 98 623 0.0 T 14-10-2018 DA442_20880 2a73983c817f44d5fbcdb9403384ef4c 829 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 42 94 1.9E-16 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DA442_20880 2a73983c817f44d5fbcdb9403384ef4c 829 Gene3D G3DSA:3.30.200.210 41 666 0.0 T 14-10-2018 DA442_20880 2a73983c817f44d5fbcdb9403384ef4c 829 SMART SM00926 41 95 1.9E-13 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DA442_14150 e25e0e5d2372303d125b6d3f5903fc0f 453 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 8 452 37.755 T 14-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 DA442_14150 e25e0e5d2372303d125b6d3f5903fc0f 453 Pfam PF12626 Polymerase A arginine-rich C-terminus 328 445 2.7E-37 T 14-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain DA442_14150 e25e0e5d2372303d125b6d3f5903fc0f 453 SUPERFAMILY SSF81891 180 417 2.49E-48 T 14-10-2018 DA442_14150 e25e0e5d2372303d125b6d3f5903fc0f 453 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 209 269 5.4E-22 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 DA442_14150 e25e0e5d2372303d125b6d3f5903fc0f 453 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 21 452 3.7E-162 T 14-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 DA442_14150 e25e0e5d2372303d125b6d3f5903fc0f 453 Gene3D G3DSA:3.30.460.10 18 178 1.2E-63 T 14-10-2018 DA442_14150 e25e0e5d2372303d125b6d3f5903fc0f 453 Gene3D G3DSA:1.10.3090.10 180 430 6.0E-93 T 14-10-2018 DA442_14150 e25e0e5d2372303d125b6d3f5903fc0f 453 Pfam PF01743 Poly A polymerase head domain 52 182 2.0E-39 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 DA442_14150 e25e0e5d2372303d125b6d3f5903fc0f 453 SUPERFAMILY SSF81301 24 179 3.38E-40 T 14-10-2018 DA442_19460 939d348e6ac2a60971976c9fd3c3fcf4 458 SUPERFAMILY SSF52467 285 458 1.54E-78 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DA442_19460 939d348e6ac2a60971976c9fd3c3fcf4 458 PIRSF PIRSF000204 1 458 2.9E-236 T 14-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 DA442_19460 939d348e6ac2a60971976c9fd3c3fcf4 458 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 456 2.2E-204 T 14-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 DA442_19460 939d348e6ac2a60971976c9fd3c3fcf4 458 Gene3D G3DSA:3.40.50.1220 282 458 3.3E-89 T 14-10-2018 DA442_19635 5be7a4773486505c7016c3a1904c9465 500 Pfam PF07730 Histidine kinase 304 367 6.0E-12 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 DA442_19635 5be7a4773486505c7016c3a1904c9465 500 SMART SM00387 407 500 0.0015 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_19635 5be7a4773486505c7016c3a1904c9465 500 Pfam PF05231 MASE1 12 276 4.3E-15 T 14-10-2018 IPR007895 MASE1 DA442_19635 5be7a4773486505c7016c3a1904c9465 500 SUPERFAMILY SSF55874 372 498 8.54E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_19635 5be7a4773486505c7016c3a1904c9465 500 Gene3D G3DSA:3.30.565.10 371 499 2.5E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_05405 66fdf038edc49c56aa1c456928c1b50d 248 Gene3D G3DSA:1.10.10.2250 8 85 3.7E-34 T 14-10-2018 DA442_05405 66fdf038edc49c56aa1c456928c1b50d 248 Gene3D G3DSA:1.10.10.2260 95 201 2.5E-49 T 14-10-2018 DA442_05405 66fdf038edc49c56aa1c456928c1b50d 248 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 17 245 49.633 T 14-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 DA442_05405 66fdf038edc49c56aa1c456928c1b50d 248 Pfam PF04288 MukE-like family 17 241 2.8E-118 T 14-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 DA442_08150 cf889aef8b779c284712dfc586daa1ac 300 Pfam PF15575 Immunity protein 49 67 284 5.1E-40 T 14-10-2018 IPR029074 Immunity protein 49 DA442_06590 33359569270181211a07c7876570bfa8 269 Gene3D G3DSA:1.10.260.40 2 68 6.5E-6 T 14-10-2018 DA442_06590 33359569270181211a07c7876570bfa8 269 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 13 66 6.2E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DA442_06590 33359569270181211a07c7876570bfa8 269 SUPERFAMILY SSF47413 6 71 1.13E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DA442_06590 33359569270181211a07c7876570bfa8 269 SMART SM00530 12 66 1.5E-4 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DA442_00315 d37a307fdae7fd450f84bd68be92f341 134 Pfam PF00893 Small Multidrug Resistance protein 6 94 6.4E-19 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 DA442_00315 d37a307fdae7fd450f84bd68be92f341 134 Gene3D G3DSA:1.10.3730.20 4 110 3.6E-28 T 14-10-2018 DA442_00315 d37a307fdae7fd450f84bd68be92f341 134 SUPERFAMILY SSF103481 6 108 3.01E-14 T 14-10-2018 DA442_17060 91a4b960b3148702bda45c578211e1e8 617 SUPERFAMILY SSF143968 475 615 2.62E-36 T 14-10-2018 DA442_17060 91a4b960b3148702bda45c578211e1e8 617 SUPERFAMILY SSF50475 3 322 3.69E-122 T 14-10-2018 DA442_17060 91a4b960b3148702bda45c578211e1e8 617 SUPERFAMILY SSF143968 323 466 6.8E-53 T 14-10-2018 DA442_17060 91a4b960b3148702bda45c578211e1e8 617 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 476 567 1.2E-20 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 DA442_17060 91a4b960b3148702bda45c578211e1e8 617 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 431 6.8E-162 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 DA442_17060 91a4b960b3148702bda45c578211e1e8 617 Gene3D G3DSA:1.20.5.570 584 617 1.3E-15 T 14-10-2018 DA442_17060 91a4b960b3148702bda45c578211e1e8 617 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 454 2.1E-165 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 DA442_17060 91a4b960b3148702bda45c578211e1e8 617 Gene3D G3DSA:3.40.1670.10 479 583 3.5E-25 T 14-10-2018 DA442_17060 91a4b960b3148702bda45c578211e1e8 617 Gene3D G3DSA:3.40.1670.10 337 453 3.3E-46 T 14-10-2018 DA442_13685 afe455485984fb293a71d719f3c4441d 211 Pfam PF14348 Domain of unknown function (DUF4400) 33 209 6.0E-25 T 14-10-2018 IPR022266 Integrating conjugative element protein, PFL4697-type DA442_15180 9952813b74afba76923b03c70b084c52 287 PIRSF PIRSF005052 1 286 6.5E-106 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 DA442_15180 9952813b74afba76923b03c70b084c52 287 Gene3D G3DSA:3.40.50.300 2 157 1.7E-5 T 14-10-2018 DA442_15180 9952813b74afba76923b03c70b084c52 287 Pfam PF03668 P-loop ATPase protein family 1 284 4.1E-110 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 DA442_15180 9952813b74afba76923b03c70b084c52 287 SUPERFAMILY SSF52540 2 151 1.74E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_15180 9952813b74afba76923b03c70b084c52 287 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 283 39.782 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 DA442_01335 48ace8dec70b4c9ee5a8be53918737c3 256 Gene3D G3DSA:3.20.20.70 1 256 3.8E-100 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_01335 48ace8dec70b4c9ee5a8be53918737c3 256 Pfam PF00121 Triosephosphate isomerase 5 247 2.6E-87 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_01335 48ace8dec70b4c9ee5a8be53918737c3 256 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 250 59.766 T 14-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_01335 48ace8dec70b4c9ee5a8be53918737c3 256 ProSitePatterns PS00171 Triosephosphate isomerase active site. 167 177 - T 14-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_01335 48ace8dec70b4c9ee5a8be53918737c3 256 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 241 2.0E-78 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_01335 48ace8dec70b4c9ee5a8be53918737c3 256 SUPERFAMILY SSF51351 2 250 4.84E-89 T 14-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_03695 59058841b048ab62cccd5d80935ae505 373 Pfam PF01098 Cell cycle protein 23 367 2.0E-113 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DA442_03695 59058841b048ab62cccd5d80935ae505 373 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 367 4.1E-135 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DA442_03695 59058841b048ab62cccd5d80935ae505 373 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 324 348 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DA442_03695 59058841b048ab62cccd5d80935ae505 373 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 16 369 28.091 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DA442_12075 c19eb0337bff68ee3c7c3e6f86db443b 199 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 101.272 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 DA442_12075 c19eb0337bff68ee3c7c3e6f86db443b 199 TIGRFAM TIGR00615 recR: recombination protein RecR 3 197 3.7E-78 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 DA442_12075 c19eb0337bff68ee3c7c3e6f86db443b 199 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 14-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 DA442_12075 c19eb0337bff68ee3c7c3e6f86db443b 199 Gene3D G3DSA:3.40.1360.10 78 199 1.2E-38 T 14-10-2018 DA442_12075 c19eb0337bff68ee3c7c3e6f86db443b 199 SMART SM00493 81 166 1.3E-16 T 14-10-2018 IPR006171 TOPRIM domain DA442_12075 c19eb0337bff68ee3c7c3e6f86db443b 199 Pfam PF02132 RecR protein 41 77 2.4E-14 T 14-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger DA442_12075 c19eb0337bff68ee3c7c3e6f86db443b 199 Pfam PF13662 Toprim domain 82 172 5.4E-23 T 14-10-2018 IPR006171 TOPRIM domain DA442_12075 c19eb0337bff68ee3c7c3e6f86db443b 199 Gene3D G3DSA:1.10.8.420 1 52 1.5E-18 T 14-10-2018 DA442_12075 c19eb0337bff68ee3c7c3e6f86db443b 199 SUPERFAMILY SSF111304 2 199 2.22E-71 T 14-10-2018 IPR023627 Recombination protein RecR DA442_10355 1e83c005ca71bc6ce7074a11944a84cb 29 Pfam PF11665 Protein of unknown function (DUF3265) 2 29 3.2E-14 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_04610 a19fde8c27a6b16297a277279c2fd4d3 407 Gene3D G3DSA:3.40.47.10 261 407 4.0E-43 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DA442_04610 a19fde8c27a6b16297a277279c2fd4d3 407 SMART SM00825 Beta-ketoacyl synthase 5 377 3.9E-11 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DA442_04610 a19fde8c27a6b16297a277279c2fd4d3 407 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 363 1.4E-27 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal DA442_04610 a19fde8c27a6b16297a277279c2fd4d3 407 Gene3D G3DSA:3.40.47.10 1 255 1.8E-59 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DA442_04610 a19fde8c27a6b16297a277279c2fd4d3 407 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 247 2.8E-40 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal DA442_04610 a19fde8c27a6b16297a277279c2fd4d3 407 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 156 172 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site DA442_04610 a19fde8c27a6b16297a277279c2fd4d3 407 SUPERFAMILY SSF53901 215 406 1.5E-59 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DA442_04610 a19fde8c27a6b16297a277279c2fd4d3 407 SUPERFAMILY SSF53901 2 252 2.3E-55 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DA442_11105 c4eaaef7b6ada13c458b0a81b6c7c196 760 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 431 753 6.6E-149 T 14-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 DA442_11105 c4eaaef7b6ada13c458b0a81b6c7c196 760 SUPERFAMILY SSF51726 396 757 2.09E-113 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 DA442_11105 c4eaaef7b6ada13c458b0a81b6c7c196 760 PIRSF PIRSF000382 2 760 0.0 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 DA442_11105 c4eaaef7b6ada13c458b0a81b6c7c196 760 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 758 0.0 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 DA442_11105 c4eaaef7b6ada13c458b0a81b6c7c196 760 SUPERFAMILY SSF51726 5 393 2.88E-107 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 DA442_11105 c4eaaef7b6ada13c458b0a81b6c7c196 760 Gene3D G3DSA:3.20.20.210 7 524 0.0 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 DA442_11105 c4eaaef7b6ada13c458b0a81b6c7c196 760 Gene3D G3DSA:3.20.20.210 389 756 0.0 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 DA442_11105 c4eaaef7b6ada13c458b0a81b6c7c196 760 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 315 4.0E-120 T 14-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 DA442_11105 c4eaaef7b6ada13c458b0a81b6c7c196 760 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 758 35.897 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 DA442_16270 d18d573f80f5c763eb35195354eeea8f 435 PIRSF PIRSF004539 1 435 6.4E-177 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 DA442_16270 d18d573f80f5c763eb35195354eeea8f 435 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 367 1.6E-145 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 DA442_16270 d18d573f80f5c763eb35195354eeea8f 435 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 434 8.3E-180 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 DA442_05945 9af22c491775b0f0c633e43a12f5e55b 286 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 82 91 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site DA442_05945 9af22c491775b0f0c633e43a12f5e55b 286 Gene3D G3DSA:1.20.1080.10 27 280 1.5E-94 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 DA442_05945 9af22c491775b0f0c633e43a12f5e55b 286 Pfam PF01226 Formate/nitrite transporter 14 275 1.4E-73 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 DA442_05945 9af22c491775b0f0c633e43a12f5e55b 286 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 25 279 4.6E-77 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 DA442_05945 9af22c491775b0f0c633e43a12f5e55b 286 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 14 278 1.4E-112 T 14-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 DA442_24545 e8c50db8fba6cd788f1087a7d195dfe7 120 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 118 2.2E-34 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 DA442_24545 e8c50db8fba6cd788f1087a7d195dfe7 120 PIRSF PIRSF002889 1 120 1.0E-33 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 DA442_24545 e8c50db8fba6cd788f1087a7d195dfe7 120 Pfam PF00460 Flagella basal body rod protein 11 38 2.7E-7 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 DA442_24545 e8c50db8fba6cd788f1087a7d195dfe7 120 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site DA442_13200 2bff961f7ade231035872d98764a2298 110 SUPERFAMILY SSF50249 8 109 9.06E-32 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_13200 2bff961f7ade231035872d98764a2298 110 Gene3D G3DSA:2.40.50.140 1 110 1.8E-37 T 14-10-2018 DA442_13200 2bff961f7ade231035872d98764a2298 110 Pfam PF01588 Putative tRNA binding domain 14 107 7.7E-30 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 DA442_12875 336cd22801a341936643ce88148778f6 571 SUPERFAMILY SSF52954 463 570 3.32E-33 T 14-10-2018 DA442_12875 336cd22801a341936643ce88148778f6 571 Gene3D G3DSA:3.30.930.10 11 465 1.2E-234 T 14-10-2018 DA442_12875 336cd22801a341936643ce88148778f6 571 SUPERFAMILY SSF55681 10 478 1.24E-96 T 14-10-2018 DA442_12875 336cd22801a341936643ce88148778f6 571 Gene3D G3DSA:3.40.50.800 4 554 1.2E-234 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily DA442_12875 336cd22801a341936643ce88148778f6 571 SUPERFAMILY SSF55826 218 390 6.8E-32 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DA442_12875 336cd22801a341936643ce88148778f6 571 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 568 1.4E-245 T 14-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 DA442_12875 336cd22801a341936643ce88148778f6 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 5.0E-39 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DA442_12875 336cd22801a341936643ce88148778f6 571 PIRSF PIRSF001535 1 571 8.2E-265 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 DA442_12875 336cd22801a341936643ce88148778f6 571 Pfam PF03129 Anticodon binding domain 475 568 1.2E-21 T 14-10-2018 IPR004154 Anticodon-binding DA442_12875 336cd22801a341936643ce88148778f6 571 Pfam PF04073 Aminoacyl-tRNA editing domain 257 378 3.0E-26 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 DA442_12875 336cd22801a341936643ce88148778f6 571 Gene3D G3DSA:3.90.960.10 240 389 1.2E-234 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DA442_12875 336cd22801a341936643ce88148778f6 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.4E-16 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 DA442_12875 336cd22801a341936643ce88148778f6 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.4E-16 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 DA442_12875 336cd22801a341936643ce88148778f6 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.4E-16 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 DA442_12875 336cd22801a341936643ce88148778f6 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.4E-16 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 DA442_12875 336cd22801a341936643ce88148778f6 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 41.016 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 DA442_07565 2eef9d3922f52e8e9833f9d3f097da68 524 Pfam PF06812 ImpA, N-terminal, type VI secretion system 10 120 1.8E-26 T 14-10-2018 IPR010657 ImpA, N-terminal DA442_07565 2eef9d3922f52e8e9833f9d3f097da68 524 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 6 497 8.9E-79 T 14-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 DA442_07565 2eef9d3922f52e8e9833f9d3f097da68 524 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 246 497 1.6E-69 T 14-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 DA442_21420 dc2db77f99302d64fb43ad187d50929a 207 SUPERFAMILY SSF51182 3 117 6.57E-34 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DA442_21420 dc2db77f99302d64fb43ad187d50929a 207 SUPERFAMILY SSF51182 102 205 6.76E-26 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DA442_21420 dc2db77f99302d64fb43ad187d50929a 207 Pfam PF12973 ChrR Cupin-like domain 7 97 3.4E-40 T 14-10-2018 IPR025979 ChrR-like cupin domain DA442_21420 dc2db77f99302d64fb43ad187d50929a 207 Pfam PF12973 ChrR Cupin-like domain 115 200 2.0E-29 T 14-10-2018 IPR025979 ChrR-like cupin domain DA442_21420 dc2db77f99302d64fb43ad187d50929a 207 Gene3D G3DSA:2.60.120.10 1 204 7.1E-75 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DA442_08075 c180a1c24f8314cfa9e5243983264043 679 SUPERFAMILY SSF103190 178 310 1.2E-13 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily DA442_08075 c180a1c24f8314cfa9e5243983264043 679 PRINTS PR00344 Bacterial sensor protein C-terminal signature 629 647 1.6E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_08075 c180a1c24f8314cfa9e5243983264043 679 PRINTS PR00344 Bacterial sensor protein C-terminal signature 653 666 1.6E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_08075 c180a1c24f8314cfa9e5243983264043 679 PRINTS PR00344 Bacterial sensor protein C-terminal signature 600 614 1.6E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_08075 c180a1c24f8314cfa9e5243983264043 679 PRINTS PR00344 Bacterial sensor protein C-terminal signature 618 628 1.6E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_08075 c180a1c24f8314cfa9e5243983264043 679 Pfam PF00512 His Kinase A (phospho-acceptor) domain 448 513 3.2E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_08075 c180a1c24f8314cfa9e5243983264043 679 SMART SM00387 558 669 1.7E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_08075 c180a1c24f8314cfa9e5243983264043 679 Pfam PF17202 Single cache domain 3 204 318 4.2E-28 T 14-10-2018 IPR033463 Single cache domain 3 DA442_08075 c180a1c24f8314cfa9e5243983264043 679 SUPERFAMILY SSF47384 442 512 1.04E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DA442_08075 c180a1c24f8314cfa9e5243983264043 679 SMART SM00388 448 515 2.4E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_08075 c180a1c24f8314cfa9e5243983264043 679 SUPERFAMILY SSF55874 505 667 1.23E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_08075 c180a1c24f8314cfa9e5243983264043 679 Gene3D G3DSA:3.30.565.10 520 672 1.2E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_08075 c180a1c24f8314cfa9e5243983264043 679 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 562 667 5.8E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_08075 c180a1c24f8314cfa9e5243983264043 679 Gene3D G3DSA:1.10.287.130 440 513 1.2E-21 T 14-10-2018 DA442_21935 4d3bb2a9583beb12c6d323b57f11f348 379 Pfam PF01070 FMN-dependent dehydrogenase 13 375 4.6E-126 T 14-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 DA442_21935 4d3bb2a9583beb12c6d323b57f11f348 379 Gene3D G3DSA:3.20.20.70 3 378 2.3E-126 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_21935 4d3bb2a9583beb12c6d323b57f11f348 379 SUPERFAMILY SSF51395 7 375 2.44E-98 T 14-10-2018 DA442_21935 4d3bb2a9583beb12c6d323b57f11f348 379 PIRSF PIRSF000138 2 379 4.7E-122 T 14-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 DA442_21935 4d3bb2a9583beb12c6d323b57f11f348 379 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 14-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 DA442_12595 bf84dc70baa077ed574c9662c3efa5c9 116 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 3 116 2.3E-47 T 14-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 DA442_12595 bf84dc70baa077ed574c9662c3efa5c9 116 Pfam PF03960 ArsC family 6 115 4.1E-20 T 14-10-2018 IPR006660 Arsenate reductase-like DA442_12595 bf84dc70baa077ed574c9662c3efa5c9 116 SUPERFAMILY SSF52833 2 116 4.79E-35 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_12595 bf84dc70baa077ed574c9662c3efa5c9 116 Gene3D G3DSA:3.40.30.10 1 116 1.1E-47 T 14-10-2018 DA442_18015 550b9461bc05d08fc8ede08708259c7f 678 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_18015 550b9461bc05d08fc8ede08708259c7f 678 SUPERFAMILY SSF81442 43 557 4.58E-175 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_18015 550b9461bc05d08fc8ede08708259c7f 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 7.5E-94 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_18015 550b9461bc05d08fc8ede08708259c7f 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 7.5E-94 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_18015 550b9461bc05d08fc8ede08708259c7f 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 7.5E-94 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_18015 550b9461bc05d08fc8ede08708259c7f 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 7.5E-94 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_18015 550b9461bc05d08fc8ede08708259c7f 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 7.5E-94 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_18015 550b9461bc05d08fc8ede08708259c7f 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 7.5E-94 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_18015 550b9461bc05d08fc8ede08708259c7f 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 7.5E-94 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_18015 550b9461bc05d08fc8ede08708259c7f 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 7.5E-94 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_18015 550b9461bc05d08fc8ede08708259c7f 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 7.5E-94 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_18015 550b9461bc05d08fc8ede08708259c7f 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 7.5E-94 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_18015 550b9461bc05d08fc8ede08708259c7f 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 7.5E-94 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_18015 550b9461bc05d08fc8ede08708259c7f 678 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 7.5E-94 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_18015 550b9461bc05d08fc8ede08708259c7f 678 Gene3D G3DSA:1.20.210.10 30 560 2.3E-183 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_18015 550b9461bc05d08fc8ede08708259c7f 678 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 648 0.0 T 14-10-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 DA442_18015 550b9461bc05d08fc8ede08708259c7f 678 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 57 503 5.1E-132 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_20645 6c5cc1b920e916b0f27be261cea259e9 545 Gene3D G3DSA:3.50.50.60 7 382 9.7E-190 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_20645 6c5cc1b920e916b0f27be261cea259e9 545 SUPERFAMILY SSF51905 4 444 1.46E-51 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_20645 6c5cc1b920e916b0f27be261cea259e9 545 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 179 194 1.4E-5 T 14-10-2018 DA442_20645 6c5cc1b920e916b0f27be261cea259e9 545 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 1.4E-5 T 14-10-2018 DA442_20645 6c5cc1b920e916b0f27be261cea259e9 545 SUPERFAMILY SSF54862 446 545 1.49E-27 T 14-10-2018 DA442_20645 6c5cc1b920e916b0f27be261cea259e9 545 Gene3D G3DSA:3.30.70.20 447 540 2.3E-37 T 14-10-2018 DA442_20645 6c5cc1b920e916b0f27be261cea259e9 545 SUPERFAMILY SSF54373 211 306 2.31E-36 T 14-10-2018 DA442_20645 6c5cc1b920e916b0f27be261cea259e9 545 Pfam PF13450 NAD(P)-binding Rossmann-like domain 12 57 9.3E-7 T 14-10-2018 DA442_20645 6c5cc1b920e916b0f27be261cea259e9 545 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 442 542 6.5E-48 T 14-10-2018 DA442_20645 6c5cc1b920e916b0f27be261cea259e9 545 Gene3D G3DSA:3.30.9.90 79 446 9.7E-190 T 14-10-2018 DA442_04730 06338f855ab1826518cb61fc8fda8586 455 Pfam PF02386 Cation transport protein 51 437 3.6E-54 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 DA442_04730 06338f855ab1826518cb61fc8fda8586 455 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 42 427 2.8E-127 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 DA442_24165 50135bf3a10c3f4652b7e8746667e866 707 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 24 696 2.7E-209 T 14-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ DA442_24165 50135bf3a10c3f4652b7e8746667e866 707 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 123 615 1.6E-71 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DA442_08340 6d6354d6fc58565aebe80011b196a411 639 SUPERFAMILY SSF52540 4 233 1.05E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_08340 6d6354d6fc58565aebe80011b196a411 639 Gene3D G3DSA:3.40.50.300 281 551 1.3E-68 T 14-10-2018 DA442_08340 6d6354d6fc58565aebe80011b196a411 639 Pfam PF16326 ABC transporter C-terminal domain 565 633 9.6E-22 T 14-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 DA442_08340 6d6354d6fc58565aebe80011b196a411 639 SMART SM00382 28 230 6.8E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_08340 6d6354d6fc58565aebe80011b196a411 639 SMART SM00382 344 514 1.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_08340 6d6354d6fc58565aebe80011b196a411 639 Pfam PF12848 ABC transporter 224 297 6.7E-11 T 14-10-2018 IPR032781 ABC-transporter extension domain DA442_08340 6d6354d6fc58565aebe80011b196a411 639 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_08340 6d6354d6fc58565aebe80011b196a411 639 Gene3D G3DSA:3.40.50.300 4 279 2.4E-67 T 14-10-2018 DA442_08340 6d6354d6fc58565aebe80011b196a411 639 Gene3D G3DSA:1.10.287.380 555 638 3.0E-29 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 DA442_08340 6d6354d6fc58565aebe80011b196a411 639 SUPERFAMILY SSF52540 310 518 9.77E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_08340 6d6354d6fc58565aebe80011b196a411 639 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_08340 6d6354d6fc58565aebe80011b196a411 639 Pfam PF00005 ABC transporter 336 469 1.3E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_08340 6d6354d6fc58565aebe80011b196a411 639 Pfam PF00005 ABC transporter 19 185 2.1E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_11155 21b2697c65776ff9106b6c8b29e1c8f7 434 SMART SM00388 224 289 8.6E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_11155 21b2697c65776ff9106b6c8b29e1c8f7 434 SUPERFAMILY SSF47384 207 289 1.75E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DA442_11155 21b2697c65776ff9106b6c8b29e1c8f7 434 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 419 1.9E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_11155 21b2697c65776ff9106b6c8b29e1c8f7 434 SUPERFAMILY SSF55874 280 419 2.05E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_11155 21b2697c65776ff9106b6c8b29e1c8f7 434 Pfam PF00512 His Kinase A (phospho-acceptor) domain 226 287 7.5E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_11155 21b2697c65776ff9106b6c8b29e1c8f7 434 SMART SM00387 333 423 2.6E-10 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_11155 21b2697c65776ff9106b6c8b29e1c8f7 434 Gene3D G3DSA:1.10.287.130 174 290 4.9E-20 T 14-10-2018 DA442_11155 21b2697c65776ff9106b6c8b29e1c8f7 434 Gene3D G3DSA:3.30.565.10 299 430 8.5E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_03390 7f421f65a0a13d7e5cbce29959b43f12 136 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 7.0E-4 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DA442_03390 7f421f65a0a13d7e5cbce29959b43f12 136 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 27 1.8E-4 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DA442_08715 50af5e31a1180b9937786d50a7c0435f 94 Pfam PF09059 TyeA 6 86 2.9E-33 T 14-10-2018 IPR015144 Type III secretion system effector delivery regulator TyeA DA442_08715 50af5e31a1180b9937786d50a7c0435f 94 Gene3D G3DSA:1.20.1280.80 1 92 2.1E-33 T 14-10-2018 IPR038347 TyeA superfamily DA442_08715 50af5e31a1180b9937786d50a7c0435f 94 ProDom PD029314 TYEA PLASMID ACR1 SECRETION CONTROL TARGETING TYPE LSSA VP1666 TARGET 1 75 2.0E-36 T 14-10-2018 IPR015144 Type III secretion system effector delivery regulator TyeA DA442_08715 50af5e31a1180b9937786d50a7c0435f 94 TIGRFAM TIGR02511 type_III_tyeA: type III secretion effector delivery regulator, TyeA family 3 84 1.0E-25 T 14-10-2018 IPR013351 Type III secretion system effector delivery regulator TyeA-related DA442_08715 50af5e31a1180b9937786d50a7c0435f 94 SUPERFAMILY SSF140591 2 92 1.88E-30 T 14-10-2018 DA442_24940 dbb8e48edf499495c6ab24bc69af0b59 385 Gene3D G3DSA:2.40.420.20 307 371 2.3E-49 T 14-10-2018 DA442_24940 dbb8e48edf499495c6ab24bc69af0b59 385 SUPERFAMILY SSF111369 61 238 3.14E-21 T 14-10-2018 DA442_24940 dbb8e48edf499495c6ab24bc69af0b59 385 Pfam PF13437 HlyD family secretion protein 184 293 3.1E-10 T 14-10-2018 DA442_24940 dbb8e48edf499495c6ab24bc69af0b59 385 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 60 372 1.3E-37 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DA442_24940 dbb8e48edf499495c6ab24bc69af0b59 385 Gene3D G3DSA:1.10.287.470 106 180 2.3E-49 T 14-10-2018 DA442_24940 dbb8e48edf499495c6ab24bc69af0b59 385 Pfam PF13533 Biotin-lipoyl like 72 120 9.8E-7 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain DA442_24940 dbb8e48edf499495c6ab24bc69af0b59 385 Gene3D G3DSA:2.40.30.170 60 306 2.3E-49 T 14-10-2018 DA442_24940 dbb8e48edf499495c6ab24bc69af0b59 385 Gene3D G3DSA:2.40.50.100 69 214 2.3E-49 T 14-10-2018 DA442_07360 79467f3fa8c32a7a1896d02382a892d8 313 Pfam PF01545 Cation efflux family 15 223 3.0E-21 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 DA442_07360 79467f3fa8c32a7a1896d02382a892d8 313 Gene3D G3DSA:1.20.1510.10 10 223 5.2E-12 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily DA442_07360 79467f3fa8c32a7a1896d02382a892d8 313 SUPERFAMILY SSF161111 7 223 8.24E-22 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily DA442_23355 45bc222f6b0ca8982dc3c24b73d12923 126 SUPERFAMILY SSF46785 4 86 1.49E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_23355 45bc222f6b0ca8982dc3c24b73d12923 126 SMART SM00345 17 76 8.8E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_23355 45bc222f6b0ca8982dc3c24b73d12923 126 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 76 3.9E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_23355 45bc222f6b0ca8982dc3c24b73d12923 126 Gene3D G3DSA:1.10.10.10 10 125 2.2E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_17120 7cb7b85a147f219bbfc8e76ba41529c1 268 SMART SM00342 185 267 9.8E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_17120 7cb7b85a147f219bbfc8e76ba41529c1 268 SUPERFAMILY SSF46689 170 218 3.81E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_17120 7cb7b85a147f219bbfc8e76ba41529c1 268 Gene3D G3DSA:1.10.10.60 169 268 5.1E-26 T 14-10-2018 DA442_17120 7cb7b85a147f219bbfc8e76ba41529c1 268 Pfam PF12833 Helix-turn-helix domain 195 267 7.5E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_17120 7cb7b85a147f219bbfc8e76ba41529c1 268 SUPERFAMILY SSF46689 221 266 1.16E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_17120 7cb7b85a147f219bbfc8e76ba41529c1 268 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 251 267 1.9E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DA442_17120 7cb7b85a147f219bbfc8e76ba41529c1 268 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 236 251 1.9E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DA442_17120 7cb7b85a147f219bbfc8e76ba41529c1 268 SUPERFAMILY SSF51215 26 136 1.18E-17 T 14-10-2018 IPR037923 Transcription regulator HTH-like DA442_17120 7cb7b85a147f219bbfc8e76ba41529c1 268 Pfam PF02311 AraC-like ligand binding domain 18 136 6.3E-20 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 DA442_01500 51526b9d4525cb8bb0791f4296c2a808 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.665 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DA442_01500 51526b9d4525cb8bb0791f4296c2a808 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 14-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_01500 51526b9d4525cb8bb0791f4296c2a808 177 SUPERFAMILY SSF56053 83 177 9.68E-36 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01500 51526b9d4525cb8bb0791f4296c2a808 177 SUPERFAMILY SSF56053 1 82 5.23E-25 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01500 51526b9d4525cb8bb0791f4296c2a808 177 PIRSF PIRSF002162 1 177 2.5E-46 T 14-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01500 51526b9d4525cb8bb0791f4296c2a808 177 Pfam PF00347 Ribosomal protein L6 91 164 1.1E-18 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01500 51526b9d4525cb8bb0791f4296c2a808 177 Pfam PF00347 Ribosomal protein L6 11 82 2.8E-20 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01500 51526b9d4525cb8bb0791f4296c2a808 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.4E-33 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DA442_01500 51526b9d4525cb8bb0791f4296c2a808 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.4E-33 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DA442_01500 51526b9d4525cb8bb0791f4296c2a808 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.4E-33 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DA442_01500 51526b9d4525cb8bb0791f4296c2a808 177 Gene3D G3DSA:3.90.930.12 83 177 2.0E-39 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01500 51526b9d4525cb8bb0791f4296c2a808 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.3E-74 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DA442_01500 51526b9d4525cb8bb0791f4296c2a808 177 Gene3D G3DSA:3.90.930.12 1 82 6.7E-31 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_02105 47e11ee4a33d888c98df1af5b96d2e79 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 7.1E-50 T 14-10-2018 IPR017861 Kae1/TsaD family DA442_02105 47e11ee4a33d888c98df1af5b96d2e79 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 7.1E-50 T 14-10-2018 IPR017861 Kae1/TsaD family DA442_02105 47e11ee4a33d888c98df1af5b96d2e79 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 7.1E-50 T 14-10-2018 IPR017861 Kae1/TsaD family DA442_02105 47e11ee4a33d888c98df1af5b96d2e79 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 7.1E-50 T 14-10-2018 IPR017861 Kae1/TsaD family DA442_02105 47e11ee4a33d888c98df1af5b96d2e79 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 7.1E-50 T 14-10-2018 IPR017861 Kae1/TsaD family DA442_02105 47e11ee4a33d888c98df1af5b96d2e79 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 7.1E-50 T 14-10-2018 IPR017861 Kae1/TsaD family DA442_02105 47e11ee4a33d888c98df1af5b96d2e79 338 Pfam PF00814 Glycoprotease family 24 307 3.5E-103 T 14-10-2018 IPR000905 Gcp-like domain DA442_02105 47e11ee4a33d888c98df1af5b96d2e79 338 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 1.3E-133 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 DA442_02105 47e11ee4a33d888c98df1af5b96d2e79 338 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 63.787 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 DA442_02105 47e11ee4a33d888c98df1af5b96d2e79 338 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 5 306 2.5E-123 T 14-10-2018 IPR017861 Kae1/TsaD family DA442_02105 47e11ee4a33d888c98df1af5b96d2e79 338 SUPERFAMILY SSF53067 3 123 6.04E-31 T 14-10-2018 DA442_02105 47e11ee4a33d888c98df1af5b96d2e79 338 Gene3D G3DSA:3.30.420.40 129 293 9.0E-131 T 14-10-2018 DA442_02105 47e11ee4a33d888c98df1af5b96d2e79 338 Gene3D G3DSA:3.30.420.40 3 315 9.0E-131 T 14-10-2018 DA442_02105 47e11ee4a33d888c98df1af5b96d2e79 338 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 14-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 DA442_02105 47e11ee4a33d888c98df1af5b96d2e79 338 SUPERFAMILY SSF53067 101 309 3.89E-43 T 14-10-2018 DA442_08925 e11bb0e5a15bc68ab64288a59bc54240 238 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 9 236 7.8E-53 T 14-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 DA442_08925 e11bb0e5a15bc68ab64288a59bc54240 238 Gene3D G3DSA:3.40.50.1360 1 238 7.2E-89 T 14-10-2018 DA442_08925 e11bb0e5a15bc68ab64288a59bc54240 238 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 225 1.5E-61 T 14-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 DA442_08925 e11bb0e5a15bc68ab64288a59bc54240 238 SUPERFAMILY SSF100950 3 237 2.2E-60 T 14-10-2018 IPR037171 NagB/RpiA transferase-like DA442_22780 04ebbe4079b618beae8606004666d4cd 333 PIRSF PIRSF002816 1 333 5.0E-147 T 14-10-2018 IPR026266 L-arabinose-binding periplasmic protein GO:0042882 DA442_22780 04ebbe4079b618beae8606004666d4cd 333 SUPERFAMILY SSF53822 33 331 7.26E-66 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DA442_22780 04ebbe4079b618beae8606004666d4cd 333 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 34 326 2.1E-72 T 14-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain DA442_22780 04ebbe4079b618beae8606004666d4cd 333 Gene3D G3DSA:3.40.50.2300 139 324 1.5E-122 T 14-10-2018 DA442_22780 04ebbe4079b618beae8606004666d4cd 333 Gene3D G3DSA:3.40.50.2300 34 315 1.5E-122 T 14-10-2018 DA442_06890 fbd459ccf0aa69d11a43614b364aaeae 326 SUPERFAMILY SSF52540 8 258 6.46E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_06890 fbd459ccf0aa69d11a43614b364aaeae 326 Pfam PF00005 ABC transporter 35 186 7.4E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_06890 fbd459ccf0aa69d11a43614b364aaeae 326 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_06890 fbd459ccf0aa69d11a43614b364aaeae 326 Gene3D G3DSA:3.40.50.300 5 326 9.4E-97 T 14-10-2018 DA442_06890 fbd459ccf0aa69d11a43614b364aaeae 326 SMART SM00382 43 236 4.4E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_06890 fbd459ccf0aa69d11a43614b364aaeae 326 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 8.2E-17 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DA442_06890 fbd459ccf0aa69d11a43614b364aaeae 326 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 238 322 1.2E-23 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DA442_22940 16eef45427e25617837d49a936c24ff4 327 Gene3D G3DSA:3.40.190.170 29 327 2.4E-108 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily DA442_22940 16eef45427e25617837d49a936c24ff4 327 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 32 309 1.5E-88 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 DA442_22940 16eef45427e25617837d49a936c24ff4 327 PIRSF PIRSF006470 1 326 5.1E-95 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 DA442_22940 16eef45427e25617837d49a936c24ff4 327 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 32 285 4.0E-81 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 DA442_22940 16eef45427e25617837d49a936c24ff4 327 SUPERFAMILY SSF53850 137 276 1.02E-9 T 14-10-2018 DA442_11185 b937c012b6d422bdbb909fdcde6cdb75 339 PIRSF PIRSF029594 1 331 8.0E-96 T 14-10-2018 IPR016926 Uncharacterised conserved protein UCP029594 DA442_11185 b937c012b6d422bdbb909fdcde6cdb75 339 Pfam PF11168 Protein of unknown function (DUF2955) 2 141 1.2E-47 T 14-10-2018 IPR022604 Protein of unknown function DUF2955 DA442_11185 b937c012b6d422bdbb909fdcde6cdb75 339 Pfam PF13515 Fusaric acid resistance protein-like 181 313 4.2E-7 T 14-10-2018 DA442_14605 bae96a87cd184f41f0836aa57ae6456e 322 SUPERFAMILY SSF103025 12 236 1.02E-56 T 14-10-2018 DA442_14605 bae96a87cd184f41f0836aa57ae6456e 322 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 316 44.326 T 14-10-2018 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 DA442_14605 bae96a87cd184f41f0836aa57ae6456e 322 Gene3D G3DSA:3.30.70.1400 29 115 3.2E-40 T 14-10-2018 DA442_14605 bae96a87cd184f41f0836aa57ae6456e 322 SUPERFAMILY SSF101790 237 320 7.19E-21 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal DA442_14605 bae96a87cd184f41f0836aa57ae6456e 322 Gene3D G3DSA:3.30.70.1630 26 187 3.2E-40 T 14-10-2018 DA442_14605 bae96a87cd184f41f0836aa57ae6456e 322 Pfam PF01571 Aminomethyltransferase folate-binding domain 28 137 1.6E-6 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain DA442_14605 bae96a87cd184f41f0836aa57ae6456e 322 PIRSF PIRSF006487 153 285 1.2 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 DA442_14605 bae96a87cd184f41f0836aa57ae6456e 322 PIRSF PIRSF006487 18 152 2.7E-5 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 DA442_14605 bae96a87cd184f41f0836aa57ae6456e 322 Gene3D G3DSA:2.40.30.160 190 310 3.5E-34 T 14-10-2018 DA442_14605 bae96a87cd184f41f0836aa57ae6456e 322 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 181 245 3.8E-25 T 14-10-2018 IPR017703 YgfZ/GcvT conserved site DA442_01325 b7c778f5b4aac9c08f287f2693b6c671 334 Gene3D G3DSA:3.40.50.720 1 334 2.1E-102 T 14-10-2018 DA442_01325 b7c778f5b4aac9c08f287f2693b6c671 334 SUPERFAMILY SSF51735 1 333 6.85E-92 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_01325 b7c778f5b4aac9c08f287f2693b6c671 334 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 6.0E-57 T 14-10-2018 IPR016040 NAD(P)-binding domain DA442_01325 b7c778f5b4aac9c08f287f2693b6c671 334 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 8.0E-30 T 14-10-2018 DA442_01325 b7c778f5b4aac9c08f287f2693b6c671 334 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 8.0E-30 T 14-10-2018 DA442_01325 b7c778f5b4aac9c08f287f2693b6c671 334 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 8.0E-30 T 14-10-2018 DA442_01325 b7c778f5b4aac9c08f287f2693b6c671 334 PRINTS PR01713 Nucleotide sugar epimerase signature 215 230 8.0E-30 T 14-10-2018 DA442_03060 ef73bfe6ce40993c8548493c2f8e8b3f 109 SMART SM01323 17 101 1.1E-38 T 14-10-2018 IPR003849 Preprotein translocase YajC DA442_03060 ef73bfe6ce40993c8548493c2f8e8b3f 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 57 75 9.6E-16 T 14-10-2018 IPR003849 Preprotein translocase YajC DA442_03060 ef73bfe6ce40993c8548493c2f8e8b3f 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 19 39 9.6E-16 T 14-10-2018 IPR003849 Preprotein translocase YajC DA442_03060 ef73bfe6ce40993c8548493c2f8e8b3f 109 Pfam PF02699 Preprotein translocase subunit 21 98 3.5E-26 T 14-10-2018 IPR003849 Preprotein translocase YajC DA442_03060 ef73bfe6ce40993c8548493c2f8e8b3f 109 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 19 101 1.3E-30 T 14-10-2018 IPR003849 Preprotein translocase YajC DA442_04240 87138f2acfe9ebf8ca2ebb2adc5dd198 284 Gene3D G3DSA:1.25.40.10 197 284 4.4E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_04240 87138f2acfe9ebf8ca2ebb2adc5dd198 284 Gene3D G3DSA:3.40.30.10 2 111 3.5E-22 T 14-10-2018 DA442_04240 87138f2acfe9ebf8ca2ebb2adc5dd198 284 SUPERFAMILY SSF48452 115 246 4.61E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_04240 87138f2acfe9ebf8ca2ebb2adc5dd198 284 Pfam PF14559 Tetratricopeptide repeat 124 190 8.5E-13 T 14-10-2018 DA442_04240 87138f2acfe9ebf8ca2ebb2adc5dd198 284 Gene3D G3DSA:1.25.40.10 112 196 8.5E-25 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_04240 87138f2acfe9ebf8ca2ebb2adc5dd198 284 Pfam PF00085 Thioredoxin 6 109 1.5E-14 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 DA442_04240 87138f2acfe9ebf8ca2ebb2adc5dd198 284 SUPERFAMILY SSF52833 3 113 3.01E-26 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_04240 87138f2acfe9ebf8ca2ebb2adc5dd198 284 Pfam PF14561 Tetratricopeptide repeat 195 284 3.1E-29 T 14-10-2018 DA442_06120 3d30083ca70528ed0e3061c2f58b0fac 159 Pfam PF05433 Glycine zipper 2TM domain 65 105 1.1E-7 T 14-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 DA442_12455 0a7936d57af5fca2903518b5a91851a1 469 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 342 351 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site DA442_12455 0a7936d57af5fca2903518b5a91851a1 469 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 215 230 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DA442_12455 0a7936d57af5fca2903518b5a91851a1 469 SUPERFAMILY SSF52172 3 173 1.85E-40 T 14-10-2018 IPR011006 CheY-like superfamily DA442_12455 0a7936d57af5fca2903518b5a91851a1 469 SMART SM00382 149 296 7.0E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_12455 0a7936d57af5fca2903518b5a91851a1 469 SUPERFAMILY SSF46689 342 460 1.84E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_12455 0a7936d57af5fca2903518b5a91851a1 469 Gene3D G3DSA:3.40.50.2300 1 119 3.1E-34 T 14-10-2018 DA442_12455 0a7936d57af5fca2903518b5a91851a1 469 Pfam PF00158 Sigma-54 interaction domain 134 295 1.1E-65 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DA442_12455 0a7936d57af5fca2903518b5a91851a1 469 SUPERFAMILY SSF52540 135 370 4.81E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_12455 0a7936d57af5fca2903518b5a91851a1 469 Gene3D G3DSA:1.10.10.60 401 466 3.1E-9 T 14-10-2018 DA442_12455 0a7936d57af5fca2903518b5a91851a1 469 Pfam PF02954 Bacterial regulatory protein, Fis family 420 459 6.3E-12 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DA442_12455 0a7936d57af5fca2903518b5a91851a1 469 Gene3D G3DSA:3.40.50.300 120 300 6.4E-65 T 14-10-2018 DA442_12455 0a7936d57af5fca2903518b5a91851a1 469 SMART SM00448 4 115 7.8E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_12455 0a7936d57af5fca2903518b5a91851a1 469 Gene3D G3DSA:1.10.8.60 301 379 9.7E-31 T 14-10-2018 DA442_12455 0a7936d57af5fca2903518b5a91851a1 469 Pfam PF00072 Response regulator receiver domain 6 115 1.9E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_19630 112945144e3f88a0c93b7efadece1810 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 2.2E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_19630 112945144e3f88a0c93b7efadece1810 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 2.2E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_19630 112945144e3f88a0c93b7efadece1810 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 2.2E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_19630 112945144e3f88a0c93b7efadece1810 202 Gene3D G3DSA:3.40.50.12740 2 202 2.7E-52 T 14-10-2018 DA442_19630 112945144e3f88a0c93b7efadece1810 202 SMART SM00421 140 197 1.3E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_19630 112945144e3f88a0c93b7efadece1810 202 SUPERFAMILY SSF46894 125 198 2.11E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DA442_19630 112945144e3f88a0c93b7efadece1810 202 SMART SM00448 2 112 2.2E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_19630 112945144e3f88a0c93b7efadece1810 202 ProSitePatterns PS00622 LuxR-type HTH domain signature. 157 184 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_19630 112945144e3f88a0c93b7efadece1810 202 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 196 4.8E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_19630 112945144e3f88a0c93b7efadece1810 202 Pfam PF00072 Response regulator receiver domain 4 113 2.3E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_19630 112945144e3f88a0c93b7efadece1810 202 SUPERFAMILY SSF52172 1 123 1.14E-26 T 14-10-2018 IPR011006 CheY-like superfamily DA442_02655 647335737b3ec683918c5247df28e666 226 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 226 145.53 T 14-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 DA442_02655 647335737b3ec683918c5247df28e666 226 Gene3D G3DSA:3.40.600.10 1 222 1.1E-54 T 14-10-2018 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily GO:0003677|GO:0004519 DA442_02655 647335737b3ec683918c5247df28e666 226 Pfam PF02976 DNA mismatch repair enzyme MutH 53 151 3.4E-34 T 14-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 DA442_02655 647335737b3ec683918c5247df28e666 226 SMART SM00927 53 151 5.7E-65 T 14-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 DA442_02655 647335737b3ec683918c5247df28e666 226 SUPERFAMILY SSF52980 2 220 3.06E-80 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DA442_02655 647335737b3ec683918c5247df28e666 226 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 5 219 3.7E-100 T 14-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 DA442_20145 7ea704a97b98706eaee912461017860e 195 SMART SM01012 133 188 5.1E-17 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 DA442_20145 7ea704a97b98706eaee912461017860e 195 Pfam PF03861 ANTAR domain 136 188 3.2E-16 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 DA442_20145 7ea704a97b98706eaee912461017860e 195 SUPERFAMILY SSF52172 2 188 9.44E-25 T 14-10-2018 IPR011006 CheY-like superfamily DA442_20145 7ea704a97b98706eaee912461017860e 195 Gene3D G3DSA:1.10.10.10 135 194 4.4E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_25520 9420cd6225e0441f3a8fc09eb29e09b5 719 SUPERFAMILY SSF53474 453 697 6.83E-49 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_25520 9420cd6225e0441f3a8fc09eb29e09b5 719 Pfam PF00326 Prolyl oligopeptidase family 499 714 3.9E-69 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 DA442_25520 9420cd6225e0441f3a8fc09eb29e09b5 719 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 545 575 - T 14-10-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 DA442_25520 9420cd6225e0441f3a8fc09eb29e09b5 719 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 42 440 2.9E-131 T 14-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 DA442_25520 9420cd6225e0441f3a8fc09eb29e09b5 719 SUPERFAMILY SSF50993 37 448 2.12E-104 T 14-10-2018 DA442_25520 9420cd6225e0441f3a8fc09eb29e09b5 719 Gene3D G3DSA:3.40.50.1820 50 683 1.4E-257 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_25520 9420cd6225e0441f3a8fc09eb29e09b5 719 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 510 534 1.4E-61 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 DA442_25520 9420cd6225e0441f3a8fc09eb29e09b5 719 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 484 502 1.4E-61 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 DA442_25520 9420cd6225e0441f3a8fc09eb29e09b5 719 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 538 557 1.4E-61 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 DA442_25520 9420cd6225e0441f3a8fc09eb29e09b5 719 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 643 665 1.4E-61 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 DA442_25520 9420cd6225e0441f3a8fc09eb29e09b5 719 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 624 639 1.4E-61 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 DA442_25520 9420cd6225e0441f3a8fc09eb29e09b5 719 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 568 588 1.4E-61 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 DA442_25520 9420cd6225e0441f3a8fc09eb29e09b5 719 Gene3D G3DSA:2.130.10.120 108 444 1.4E-257 T 14-10-2018 DA442_14425 d8c2408111761a1dd28ccb08b875e5f2 860 Pfam PF01411 tRNA synthetases class II (A) 7 555 2.0E-224 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 DA442_14425 d8c2408111761a1dd28ccb08b875e5f2 860 Gene3D G3DSA:3.30.930.10 2 251 5.5E-120 T 14-10-2018 DA442_14425 d8c2408111761a1dd28ccb08b875e5f2 860 SUPERFAMILY SSF101353 255 460 4.45E-60 T 14-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 DA442_14425 d8c2408111761a1dd28ccb08b875e5f2 860 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 839 0.0 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DA442_14425 d8c2408111761a1dd28ccb08b875e5f2 860 SMART SM00863 652 695 1.4E-22 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DA442_14425 d8c2408111761a1dd28ccb08b875e5f2 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 4.6E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DA442_14425 d8c2408111761a1dd28ccb08b875e5f2 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 208 219 4.6E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DA442_14425 d8c2408111761a1dd28ccb08b875e5f2 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 281 297 4.6E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DA442_14425 d8c2408111761a1dd28ccb08b875e5f2 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 235 248 4.6E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DA442_14425 d8c2408111761a1dd28ccb08b875e5f2 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 305 318 4.6E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DA442_14425 d8c2408111761a1dd28ccb08b875e5f2 860 Pfam PF02272 DHHA1 domain 722 854 2.2E-28 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 DA442_14425 d8c2408111761a1dd28ccb08b875e5f2 860 Gene3D G3DSA:3.30.54.20 623 676 9.2E-52 T 14-10-2018 DA442_14425 d8c2408111761a1dd28ccb08b875e5f2 860 Gene3D G3DSA:3.10.310.40 749 857 2.7E-34 T 14-10-2018 DA442_14425 d8c2408111761a1dd28ccb08b875e5f2 860 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 652 695 2.9E-19 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DA442_14425 d8c2408111761a1dd28ccb08b875e5f2 860 SUPERFAMILY SSF50447 454 551 1.38E-17 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DA442_14425 d8c2408111761a1dd28ccb08b875e5f2 860 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 860 198.554 T 14-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 DA442_14425 d8c2408111761a1dd28ccb08b875e5f2 860 SUPERFAMILY SSF55681 3 254 1.39E-108 T 14-10-2018 DA442_14425 d8c2408111761a1dd28ccb08b875e5f2 860 Gene3D G3DSA:2.40.30.130 463 551 5.8E-10 T 14-10-2018 DA442_14425 d8c2408111761a1dd28ccb08b875e5f2 860 Gene3D G3DSA:3.30.980.10 562 696 9.2E-52 T 14-10-2018 DA442_14425 d8c2408111761a1dd28ccb08b875e5f2 860 SUPERFAMILY SSF55186 551 710 7.19E-54 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 DA442_01590 08e39250e6ed814da481f8e3fa6a4205 651 Gene3D G3DSA:3.60.21.10 20 358 5.4E-136 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like DA442_01590 08e39250e6ed814da481f8e3fa6a4205 651 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 27 651 0.0 T 14-10-2018 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 DA442_01590 08e39250e6ed814da481f8e3fa6a4205 651 Pfam PF00149 Calcineurin-like phosphoesterase 28 263 3.0E-11 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DA442_01590 08e39250e6ed814da481f8e3fa6a4205 651 SUPERFAMILY SSF55816 359 601 6.93E-36 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_01590 08e39250e6ed814da481f8e3fa6a4205 651 ProSitePatterns PS00786 5'-nucleotidase signature 2. 113 124 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_01590 08e39250e6ed814da481f8e3fa6a4205 651 Pfam PF02872 5'-nucleotidase, C-terminal domain 360 552 1.1E-20 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_01590 08e39250e6ed814da481f8e3fa6a4205 651 SUPERFAMILY SSF56300 21 358 7.38E-87 T 14-10-2018 DA442_01590 08e39250e6ed814da481f8e3fa6a4205 651 Gene3D G3DSA:3.90.780.10 415 590 2.5E-48 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_01590 08e39250e6ed814da481f8e3fa6a4205 651 PRINTS PR01607 Apyrase family signature 219 236 5.0E-29 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_01590 08e39250e6ed814da481f8e3fa6a4205 651 PRINTS PR01607 Apyrase family signature 432 455 5.0E-29 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_01590 08e39250e6ed814da481f8e3fa6a4205 651 PRINTS PR01607 Apyrase family signature 287 307 5.0E-29 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_01590 08e39250e6ed814da481f8e3fa6a4205 651 PRINTS PR01607 Apyrase family signature 26 44 5.0E-29 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_01590 08e39250e6ed814da481f8e3fa6a4205 651 PRINTS PR01607 Apyrase family signature 534 553 5.0E-29 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_01590 08e39250e6ed814da481f8e3fa6a4205 651 PRINTS PR01607 Apyrase family signature 247 270 5.0E-29 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_00680 ec65c3faa27e02fc4e883553bfb087b7 291 Hamap MF_00117 33 kDa chaperonin [hslO]. 3 283 31.477 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 DA442_00680 ec65c3faa27e02fc4e883553bfb087b7 291 PIRSF PIRSF005261 1 284 5.7E-69 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 DA442_00680 ec65c3faa27e02fc4e883553bfb087b7 291 Gene3D G3DSA:1.10.287.480 178 224 2.0E-22 T 14-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily DA442_00680 ec65c3faa27e02fc4e883553bfb087b7 291 SUPERFAMILY SSF64397 4 231 1.96E-75 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 DA442_00680 ec65c3faa27e02fc4e883553bfb087b7 291 Gene3D G3DSA:3.90.1280.10 225 284 2.0E-19 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 DA442_00680 ec65c3faa27e02fc4e883553bfb087b7 291 Gene3D G3DSA:3.55.30.10 1 175 3.5E-62 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 DA442_00680 ec65c3faa27e02fc4e883553bfb087b7 291 Pfam PF01430 Hsp33 protein 6 272 1.3E-77 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 DA442_00680 ec65c3faa27e02fc4e883553bfb087b7 291 SUPERFAMILY SSF118352 223 281 1.44E-17 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 DA442_09190 ef99dc59543a6e787abd65a46563a913 160 SUPERFAMILY SSF46785 10 156 1.57E-34 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_09190 ef99dc59543a6e787abd65a46563a913 160 SMART SM00347 42 145 1.0E-28 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DA442_09190 ef99dc59543a6e787abd65a46563a913 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 85 3.2E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DA442_09190 ef99dc59543a6e787abd65a46563a913 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 101 3.2E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DA442_09190 ef99dc59543a6e787abd65a46563a913 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 105 121 3.2E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DA442_09190 ef99dc59543a6e787abd65a46563a913 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 135 155 3.2E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DA442_09190 ef99dc59543a6e787abd65a46563a913 160 ProSitePatterns PS01117 MarR-type HTH domain signature. 84 118 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site DA442_09190 ef99dc59543a6e787abd65a46563a913 160 Gene3D G3DSA:1.10.10.10 1 160 1.7E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_09190 ef99dc59543a6e787abd65a46563a913 160 Pfam PF01047 MarR family 50 110 1.2E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DA442_18510 406b148bb73d1e3c8e94002603320a1a 362 Gene3D G3DSA:1.25.40.10 27 231 4.5E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_18510 406b148bb73d1e3c8e94002603320a1a 362 Pfam PF13432 Tetratricopeptide repeat 100 151 6.0E-5 T 14-10-2018 DA442_18510 406b148bb73d1e3c8e94002603320a1a 362 SUPERFAMILY SSF48452 81 225 3.98E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_08800 93b80675764ccca6edc0cb8d5abb2ea9 149 Pfam PF05932 Tir chaperone protein (CesT) family 9 125 2.0E-5 T 14-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 DA442_08800 93b80675764ccca6edc0cb8d5abb2ea9 149 SUPERFAMILY SSF69635 5 131 3.61E-11 T 14-10-2018 DA442_08800 93b80675764ccca6edc0cb8d5abb2ea9 149 Gene3D G3DSA:3.30.1460.10 2 131 2.1E-16 T 14-10-2018 DA442_14245 c60d8e238992dd6075d3abb9a92e605b 295 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 41 127 1.2E-26 T 14-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 DA442_14245 c60d8e238992dd6075d3abb9a92e605b 295 PIRSF PIRSF006250 16 295 3.3E-99 T 14-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 DA442_14245 c60d8e238992dd6075d3abb9a92e605b 295 Gene3D G3DSA:3.20.20.70 138 284 1.1E-125 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_14245 c60d8e238992dd6075d3abb9a92e605b 295 SUPERFAMILY SSF54675 15 128 4.32E-32 T 14-10-2018 DA442_14245 c60d8e238992dd6075d3abb9a92e605b 295 SUPERFAMILY SSF51690 130 294 1.06E-59 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 DA442_14245 c60d8e238992dd6075d3abb9a92e605b 295 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 130 293 8.7E-58 T 14-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 DA442_14245 c60d8e238992dd6075d3abb9a92e605b 295 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 26 294 8.1E-94 T 14-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 DA442_14245 c60d8e238992dd6075d3abb9a92e605b 295 Gene3D G3DSA:3.90.1170.20 21 293 1.1E-125 T 14-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 DA442_07560 9b05e4a74fbc289238f63967d3ac922f 686 SUPERFAMILY SSF56112 80 266 8.09E-36 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily DA442_07560 9b05e4a74fbc289238f63967d3ac922f 686 Gene3D G3DSA:1.10.510.10 48 321 4.0E-34 T 14-10-2018 DA442_07560 9b05e4a74fbc289238f63967d3ac922f 686 SMART SM00220 65 324 1.0E-11 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 DA442_07560 9b05e4a74fbc289238f63967d3ac922f 686 Pfam PF00069 Protein kinase domain 82 263 4.2E-29 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 DA442_07560 9b05e4a74fbc289238f63967d3ac922f 686 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 186 198 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 DA442_01930 5b7c430e4dee7f230732ac88d62ee3ad 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 40.336 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 DA442_01930 5b7c430e4dee7f230732ac88d62ee3ad 610 Pfam PF01380 SIS domain 463 592 3.5E-24 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DA442_01930 5b7c430e4dee7f230732ac88d62ee3ad 610 Pfam PF01380 SIS domain 290 419 1.2E-32 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DA442_01930 5b7c430e4dee7f230732ac88d62ee3ad 610 Gene3D G3DSA:3.40.50.10490 249 609 2.2E-144 T 14-10-2018 DA442_01930 5b7c430e4dee7f230732ac88d62ee3ad 610 SUPERFAMILY SSF56235 2 234 2.23E-75 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DA442_01930 5b7c430e4dee7f230732ac88d62ee3ad 610 Pfam PF13522 Glutamine amidotransferase domain 54 174 7.3E-22 T 14-10-2018 DA442_01930 5b7c430e4dee7f230732ac88d62ee3ad 610 SUPERFAMILY SSF53697 245 610 1.58E-113 T 14-10-2018 DA442_01930 5b7c430e4dee7f230732ac88d62ee3ad 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 1.1E-257 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 DA442_01930 5b7c430e4dee7f230732ac88d62ee3ad 610 Gene3D G3DSA:3.40.50.10490 448 595 2.2E-144 T 14-10-2018 DA442_01930 5b7c430e4dee7f230732ac88d62ee3ad 610 Gene3D G3DSA:3.60.20.10 2 241 2.6E-81 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DA442_05915 d1bb1ed794116010dcac496547b60561 192 Gene3D G3DSA:3.30.60.20 144 189 1.2E-7 T 14-10-2018 DA442_05915 d1bb1ed794116010dcac496547b60561 192 PIRSF PIRSF035805 1 192 1.1E-56 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 DA442_05915 d1bb1ed794116010dcac496547b60561 192 Gene3D G3DSA:3.40.50.300 2 140 5.2E-24 T 14-10-2018 DA442_05915 d1bb1ed794116010dcac496547b60561 192 Pfam PF00265 Thymidine kinase 2 186 3.2E-59 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 DA442_05915 d1bb1ed794116010dcac496547b60561 192 SUPERFAMILY SSF52540 2 141 5.57E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_05915 d1bb1ed794116010dcac496547b60561 192 SUPERFAMILY SSF57716 142 190 1.57E-16 T 14-10-2018 DA442_05915 d1bb1ed794116010dcac496547b60561 192 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 34.748 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 DA442_05915 d1bb1ed794116010dcac496547b60561 192 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 14-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 DA442_16890 0271e872140ec47a0970900c36c28484 333 PIRSF PIRSF000149 1 331 9.6E-115 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_16890 0271e872140ec47a0970900c36c28484 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 2.0E-58 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_16890 0271e872140ec47a0970900c36c28484 333 Gene3D G3DSA:3.30.360.10 151 315 2.0E-126 T 14-10-2018 DA442_16890 0271e872140ec47a0970900c36c28484 333 SUPERFAMILY SSF55347 152 314 4.46E-62 T 14-10-2018 DA442_16890 0271e872140ec47a0970900c36c28484 333 SMART SM00846 3 152 9.6E-73 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_16890 0271e872140ec47a0970900c36c28484 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 108 121 1.1E-28 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_16890 0271e872140ec47a0970900c36c28484 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 1.1E-28 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_16890 0271e872140ec47a0970900c36c28484 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 1.1E-28 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_16890 0271e872140ec47a0970900c36c28484 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 1.1E-28 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_16890 0271e872140ec47a0970900c36c28484 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 1.1E-28 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_16890 0271e872140ec47a0970900c36c28484 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 101 2.7E-32 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_16890 0271e872140ec47a0970900c36c28484 333 SUPERFAMILY SSF51735 1 173 1.79E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_16890 0271e872140ec47a0970900c36c28484 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_16890 0271e872140ec47a0970900c36c28484 333 Gene3D G3DSA:3.40.50.720 4 327 2.0E-126 T 14-10-2018 DA442_16890 0271e872140ec47a0970900c36c28484 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 323 2.9E-119 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_06015 b03fb84d5ecb4d7759f04de869b8431f 539 Gene3D G3DSA:3.90.76.10 44 216 5.2E-143 T 14-10-2018 DA442_06015 b03fb84d5ecb4d7759f04de869b8431f 539 SUPERFAMILY SSF53850 35 535 1.41E-131 T 14-10-2018 DA442_06015 b03fb84d5ecb4d7759f04de869b8431f 539 PIRSF PIRSF002741 4 538 2.2E-92 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DA442_06015 b03fb84d5ecb4d7759f04de869b8431f 539 Gene3D G3DSA:3.40.190.10 217 526 5.2E-143 T 14-10-2018 DA442_06015 b03fb84d5ecb4d7759f04de869b8431f 539 Gene3D G3DSA:3.10.105.10 296 514 5.2E-143 T 14-10-2018 DA442_06015 b03fb84d5ecb4d7759f04de869b8431f 539 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 455 1.2E-85 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain DA442_01885 1a4fc32f304d177b77ba805a3b3545f2 319 Gene3D G3DSA:3.40.190.10 108 307 5.6E-41 T 14-10-2018 DA442_01885 1a4fc32f304d177b77ba805a3b3545f2 319 Gene3D G3DSA:1.10.10.10 14 104 2.9E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_01885 1a4fc32f304d177b77ba805a3b3545f2 319 Gene3D G3DSA:3.40.190.10 187 283 5.6E-41 T 14-10-2018 DA442_01885 1a4fc32f304d177b77ba805a3b3545f2 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 61 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_01885 1a4fc32f304d177b77ba805a3b3545f2 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 61 72 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_01885 1a4fc32f304d177b77ba805a3b3545f2 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_01885 1a4fc32f304d177b77ba805a3b3545f2 319 SUPERFAMILY SSF53850 106 309 2.53E-39 T 14-10-2018 DA442_01885 1a4fc32f304d177b77ba805a3b3545f2 319 SUPERFAMILY SSF46785 22 99 3.45E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_01885 1a4fc32f304d177b77ba805a3b3545f2 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 84 1.3E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_01885 1a4fc32f304d177b77ba805a3b3545f2 319 Pfam PF03466 LysR substrate binding domain 121 306 3.4E-23 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_01525 cd99ea128a4656b285fc32fee62ce7bc 444 SUPERFAMILY SSF103491 15 425 5.62E-131 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DA442_01525 cd99ea128a4656b285fc32fee62ce7bc 444 PIRSF PIRSF004557 10 442 4.2E-122 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DA442_01525 cd99ea128a4656b285fc32fee62ce7bc 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 371 389 1.9E-95 T 14-10-2018 DA442_01525 cd99ea128a4656b285fc32fee62ce7bc 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 403 421 1.9E-95 T 14-10-2018 DA442_01525 cd99ea128a4656b285fc32fee62ce7bc 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 152 177 1.9E-95 T 14-10-2018 DA442_01525 cd99ea128a4656b285fc32fee62ce7bc 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 1.9E-95 T 14-10-2018 DA442_01525 cd99ea128a4656b285fc32fee62ce7bc 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 1.9E-95 T 14-10-2018 DA442_01525 cd99ea128a4656b285fc32fee62ce7bc 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 316 338 1.9E-95 T 14-10-2018 DA442_01525 cd99ea128a4656b285fc32fee62ce7bc 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 1.9E-95 T 14-10-2018 DA442_01525 cd99ea128a4656b285fc32fee62ce7bc 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 178 201 1.9E-95 T 14-10-2018 DA442_01525 cd99ea128a4656b285fc32fee62ce7bc 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 270 289 1.9E-95 T 14-10-2018 DA442_01525 cd99ea128a4656b285fc32fee62ce7bc 444 Gene3D G3DSA:1.10.3370.10 10 430 5.6E-160 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DA442_01525 cd99ea128a4656b285fc32fee62ce7bc 444 Hamap MF_01465 Protein translocase subunit SecY [secY]. 9 434 29.21 T 14-10-2018 IPR026593 Protein translocase subunit SecY DA442_01525 cd99ea128a4656b285fc32fee62ce7bc 444 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DA442_01525 cd99ea128a4656b285fc32fee62ce7bc 444 ProSitePatterns PS00756 Protein secY signature 2. 171 188 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DA442_01525 cd99ea128a4656b285fc32fee62ce7bc 444 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 430 3.4E-134 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DA442_01525 cd99ea128a4656b285fc32fee62ce7bc 444 Pfam PF00344 SecY translocase 76 418 8.6E-118 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DA442_05850 51126ad3e0fbe68143287df87adaa141 431 Gene3D G3DSA:3.40.50.1980 231 346 3.5E-127 T 14-10-2018 DA442_05850 51126ad3e0fbe68143287df87adaa141 431 PRINTS PR00083 Histidinol dehydrogenase signature 227 248 1.1E-102 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DA442_05850 51126ad3e0fbe68143287df87adaa141 431 PRINTS PR00083 Histidinol dehydrogenase signature 165 191 1.1E-102 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DA442_05850 51126ad3e0fbe68143287df87adaa141 431 PRINTS PR00083 Histidinol dehydrogenase signature 134 160 1.1E-102 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DA442_05850 51126ad3e0fbe68143287df87adaa141 431 PRINTS PR00083 Histidinol dehydrogenase signature 358 376 1.1E-102 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DA442_05850 51126ad3e0fbe68143287df87adaa141 431 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 1.1E-102 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DA442_05850 51126ad3e0fbe68143287df87adaa141 431 PRINTS PR00083 Histidinol dehydrogenase signature 195 220 1.1E-102 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DA442_05850 51126ad3e0fbe68143287df87adaa141 431 PRINTS PR00083 Histidinol dehydrogenase signature 317 342 1.1E-102 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DA442_05850 51126ad3e0fbe68143287df87adaa141 431 PRINTS PR00083 Histidinol dehydrogenase signature 249 268 1.1E-102 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DA442_05850 51126ad3e0fbe68143287df87adaa141 431 Gene3D G3DSA:3.40.50.1980 30 229 3.5E-127 T 14-10-2018 DA442_05850 51126ad3e0fbe68143287df87adaa141 431 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 227 259 - T 14-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 DA442_05850 51126ad3e0fbe68143287df87adaa141 431 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 423 6.9E-168 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DA442_05850 51126ad3e0fbe68143287df87adaa141 431 PIRSF PIRSF000099 1 427 3.8E-172 T 14-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DA442_05850 51126ad3e0fbe68143287df87adaa141 431 SUPERFAMILY SSF53720 4 424 2.35E-92 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DA442_05850 51126ad3e0fbe68143287df87adaa141 431 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 424 42.528 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DA442_05850 51126ad3e0fbe68143287df87adaa141 431 Pfam PF00815 Histidinol dehydrogenase 27 424 3.0E-172 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DA442_06550 ac1ee18f4a8ff446dcd9afa99de79fa7 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 68 3.1E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_06550 ac1ee18f4a8ff446dcd9afa99de79fa7 235 SMART SM00345 9 68 4.4E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_06550 ac1ee18f4a8ff446dcd9afa99de79fa7 235 SUPERFAMILY SSF46785 3 72 1.92E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_06550 ac1ee18f4a8ff446dcd9afa99de79fa7 235 Gene3D G3DSA:1.10.10.10 1 69 9.8E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_06550 ac1ee18f4a8ff446dcd9afa99de79fa7 235 SUPERFAMILY SSF64288 95 231 3.93E-36 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DA442_06550 ac1ee18f4a8ff446dcd9afa99de79fa7 235 Gene3D G3DSA:3.40.1410.10 89 224 5.6E-30 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DA442_06550 ac1ee18f4a8ff446dcd9afa99de79fa7 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 1.6E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_06550 ac1ee18f4a8ff446dcd9afa99de79fa7 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 1.6E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_06550 ac1ee18f4a8ff446dcd9afa99de79fa7 235 Pfam PF07702 UTRA domain 92 228 4.4E-32 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DA442_06550 ac1ee18f4a8ff446dcd9afa99de79fa7 235 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 4 233 1.6E-91 T 14-10-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 DA442_06550 ac1ee18f4a8ff446dcd9afa99de79fa7 235 SMART SM00866 91 228 3.1E-26 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DA442_18440 e09de2672a6aa0e03f066c8d6391322d 248 Gene3D G3DSA:3.20.20.450 15 234 1.6E-20 T 14-10-2018 IPR035919 EAL domain superfamily DA442_18440 e09de2672a6aa0e03f066c8d6391322d 248 SUPERFAMILY SSF141868 21 232 1.57E-23 T 14-10-2018 IPR035919 EAL domain superfamily DA442_18440 e09de2672a6aa0e03f066c8d6391322d 248 SMART SM00052 4 231 8.8E-6 T 14-10-2018 IPR001633 EAL domain DA442_18440 e09de2672a6aa0e03f066c8d6391322d 248 Pfam PF00563 EAL domain 24 185 1.4E-18 T 14-10-2018 IPR001633 EAL domain DA442_23015 c7eff909cef30790a3b72ced7c5f4bc1 158 SUPERFAMILY SSF46785 3 64 2.05E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_23015 c7eff909cef30790a3b72ced7c5f4bc1 158 Gene3D G3DSA:1.10.10.10 1 56 3.4E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_23015 c7eff909cef30790a3b72ced7c5f4bc1 158 Pfam PF13412 Winged helix-turn-helix DNA-binding 5 51 3.9E-16 T 14-10-2018 DA442_23015 c7eff909cef30790a3b72ced7c5f4bc1 158 Pfam PF01037 Lrp/AsnC ligand binding domain 71 145 4.0E-22 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DA442_23015 c7eff909cef30790a3b72ced7c5f4bc1 158 Gene3D G3DSA:3.30.70.920 57 151 5.2E-26 T 14-10-2018 DA442_23015 c7eff909cef30790a3b72ced7c5f4bc1 158 SMART SM00344 5 114 2.8E-43 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DA442_23015 c7eff909cef30790a3b72ced7c5f4bc1 158 SUPERFAMILY SSF54909 65 150 1.74E-20 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel DA442_23015 c7eff909cef30790a3b72ced7c5f4bc1 158 ProSitePatterns PS00519 AsnC-type HTH domain signature. 23 49 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DA442_23015 c7eff909cef30790a3b72ced7c5f4bc1 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 7.6E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DA442_23015 c7eff909cef30790a3b72ced7c5f4bc1 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 7.6E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DA442_23015 c7eff909cef30790a3b72ced7c5f4bc1 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 7.6E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DA442_24955 515907dcc04327091e49e1ea21162fb3 406 Pfam PF05990 Alpha/beta hydrolase of unknown function (DUF900) 187 304 1.3E-4 T 14-10-2018 IPR010297 Protein of unknown function DUF900, hydrolase-like DA442_21685 55e576caa737aea83835c181a9524937 638 SUPERFAMILY SSF58104 329 638 5.62E-79 T 14-10-2018 DA442_21685 55e576caa737aea83835c181a9524937 638 Gene3D G3DSA:1.10.287.950 306 638 2.7E-77 T 14-10-2018 DA442_21685 55e576caa737aea83835c181a9524937 638 Gene3D G3DSA:3.30.450.20 162 283 1.8E-17 T 14-10-2018 DA442_21685 55e576caa737aea83835c181a9524937 638 SMART SM00304 307 361 1.1E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_21685 55e576caa737aea83835c181a9524937 638 Pfam PF00672 HAMP domain 308 357 1.6E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_21685 55e576caa737aea83835c181a9524937 638 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 422 604 4.8E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_21685 55e576caa737aea83835c181a9524937 638 SMART SM00283 376 637 1.6E-84 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_02665 3a7e5296b64c4f64efa626914b2f2ce3 174 Pfam PF00293 NUDIX domain 7 145 6.4E-27 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DA442_02665 3a7e5296b64c4f64efa626914b2f2ce3 174 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.547 T 14-10-2018 IPR022927 RNA pyrophosphohydrolase RppH DA442_02665 3a7e5296b64c4f64efa626914b2f2ce3 174 PRINTS PR00502 NUDIX hydrolase family signature 33 47 3.5E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DA442_02665 3a7e5296b64c4f64efa626914b2f2ce3 174 PRINTS PR00502 NUDIX hydrolase family signature 47 62 3.5E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DA442_02665 3a7e5296b64c4f64efa626914b2f2ce3 174 Gene3D G3DSA:3.90.79.10 1 159 7.9E-51 T 14-10-2018 DA442_02665 3a7e5296b64c4f64efa626914b2f2ce3 174 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DA442_02665 3a7e5296b64c4f64efa626914b2f2ce3 174 SUPERFAMILY SSF55811 6 152 8.53E-32 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DA442_00975 4df31c42e09a99a309761780cecfcb7a 401 Pfam PF13356 Arm DNA-binding domain 4 87 2.9E-16 T 14-10-2018 IPR025166 Integrase, DNA-binding domain DA442_00975 4df31c42e09a99a309761780cecfcb7a 401 SUPERFAMILY SSF56349 95 390 4.41E-53 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DA442_00975 4df31c42e09a99a309761780cecfcb7a 401 Gene3D G3DSA:1.10.443.10 200 395 3.4E-20 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DA442_00975 4df31c42e09a99a309761780cecfcb7a 401 Pfam PF00589 Phage integrase family 202 380 1.1E-16 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DA442_00975 4df31c42e09a99a309761780cecfcb7a 401 Gene3D G3DSA:1.10.150.130 96 199 1.3E-35 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal DA442_00975 4df31c42e09a99a309761780cecfcb7a 401 Gene3D G3DSA:3.30.160.390 3 95 2.2E-22 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily DA442_04835 3b45074c90f8f92813c05f05f9cca852 194 SUPERFAMILY SSF109604 4 184 6.85E-44 T 14-10-2018 DA442_04835 3b45074c90f8f92813c05f05f9cca852 194 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 80 176 2.0E-40 T 14-10-2018 DA442_04835 3b45074c90f8f92813c05f05f9cca852 194 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 3 194 46.038 T 14-10-2018 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 DA442_04835 3b45074c90f8f92813c05f05f9cca852 194 Pfam PF13023 HD domain 11 158 3.0E-16 T 14-10-2018 IPR006674 HD domain DA442_04835 3b45074c90f8f92813c05f05f9cca852 194 Gene3D G3DSA:1.10.3210.10 1 194 2.9E-85 T 14-10-2018 DA442_04835 3b45074c90f8f92813c05f05f9cca852 194 SMART SM00471 26 151 8.0E-8 T 14-10-2018 IPR003607 HD/PDEase domain DA442_23685 c52543688031cf80a096bcba56557b3e 378 SUPERFAMILY SSF56281 98 354 4.85E-31 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DA442_23685 c52543688031cf80a096bcba56557b3e 378 Pfam PF12706 Beta-lactamase superfamily domain 116 316 3.1E-39 T 14-10-2018 IPR001279 Metallo-beta-lactamase DA442_23685 c52543688031cf80a096bcba56557b3e 378 Gene3D G3DSA:3.60.15.10 80 373 1.9E-72 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DA442_25720 29cb387d4a4c9aac844e07c159fa1729 111 SUPERFAMILY SSF47413 5 61 1.77E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DA442_25720 29cb387d4a4c9aac844e07c159fa1729 111 Gene3D G3DSA:1.10.260.40 4 67 5.3E-11 T 14-10-2018 DA442_25720 29cb387d4a4c9aac844e07c159fa1729 111 Pfam PF13560 Helix-turn-helix domain 13 61 5.4E-10 T 14-10-2018 DA442_25720 29cb387d4a4c9aac844e07c159fa1729 111 SMART SM00530 9 64 3.6E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DA442_18330 d3c386b7887f0e4ebff988d556b7e39a 141 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 99 4.9E-18 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain DA442_18330 d3c386b7887f0e4ebff988d556b7e39a 141 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 49 87 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 DA442_18330 d3c386b7887f0e4ebff988d556b7e39a 141 Gene3D G3DSA:3.40.140.10 1 133 1.9E-41 T 14-10-2018 DA442_18330 d3c386b7887f0e4ebff988d556b7e39a 141 SUPERFAMILY SSF53927 2 137 1.58E-41 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 DA442_14835 10319446766a2c160e097d6858847d6a 379 Pfam PF01464 Transglycosylase SLT domain 211 332 3.9E-28 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 DA442_14835 10319446766a2c160e097d6858847d6a 379 Pfam PF11873 Domain of unknown function (DUF3393) 3 205 1.3E-79 T 14-10-2018 IPR024570 Murein transglycosylase-C, N-terminal DA442_14835 10319446766a2c160e097d6858847d6a 379 SUPERFAMILY SSF53955 188 371 2.34E-36 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily DA442_14835 10319446766a2c160e097d6858847d6a 379 Gene3D G3DSA:1.10.530.10 190 371 2.0E-49 T 14-10-2018 DA442_14835 10319446766a2c160e097d6858847d6a 379 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 228 256 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 DA442_20680 33e7763c93f3af0fb1bb58a4d8370403 334 Gene3D G3DSA:3.40.50.2300 3 123 6.2E-28 T 14-10-2018 DA442_20680 33e7763c93f3af0fb1bb58a4d8370403 334 SMART SM00448 3 115 5.2E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_20680 33e7763c93f3af0fb1bb58a4d8370403 334 Pfam PF00072 Response regulator receiver domain 5 115 5.4E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_20680 33e7763c93f3af0fb1bb58a4d8370403 334 SUPERFAMILY SSF52172 4 120 1.57E-27 T 14-10-2018 IPR011006 CheY-like superfamily DA442_20680 33e7763c93f3af0fb1bb58a4d8370403 334 SUPERFAMILY SSF103039 140 329 1.44E-38 T 14-10-2018 IPR028976 CheC-like superfamily DA442_20680 33e7763c93f3af0fb1bb58a4d8370403 334 Gene3D G3DSA:3.40.1550.10 139 328 2.4E-31 T 14-10-2018 IPR028976 CheC-like superfamily DA442_15740 22b181e49096b7a6182d907e0a8aa392 156 SUPERFAMILY SSF47973 6 149 5.36E-60 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily DA442_15740 22b181e49096b7a6182d907e0a8aa392 156 Gene3D G3DSA:1.10.455.10 2 155 3.2E-65 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily DA442_15740 22b181e49096b7a6182d907e0a8aa392 156 PIRSF PIRSF002122 3 156 2.4E-63 T 14-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 DA442_15740 22b181e49096b7a6182d907e0a8aa392 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 1.4E-71 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 DA442_15740 22b181e49096b7a6182d907e0a8aa392 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 4.3E-66 T 14-10-2018 IPR023798 Ribosomal protein S7 domain DA442_15740 22b181e49096b7a6182d907e0a8aa392 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 36.04 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 DA442_15740 22b181e49096b7a6182d907e0a8aa392 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 14-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_18175 2a6713f483e7be5dce4822036b8f92b9 251 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_18175 2a6713f483e7be5dce4822036b8f92b9 251 SMART SM00382 26 213 8.7E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_18175 2a6713f483e7be5dce4822036b8f92b9 251 Gene3D G3DSA:3.40.50.300 1 249 3.6E-61 T 14-10-2018 DA442_18175 2a6713f483e7be5dce4822036b8f92b9 251 SUPERFAMILY SSF52540 2 227 1.05E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_18175 2a6713f483e7be5dce4822036b8f92b9 251 Pfam PF00005 ABC transporter 19 164 6.5E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_14165 e2638dd8cc440863cc7addeaf5b84888 301 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 281 2.7E-102 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 DA442_14165 e2638dd8cc440863cc7addeaf5b84888 301 Gene3D G3DSA:3.30.1300.10 181 283 5.2E-26 T 14-10-2018 DA442_14165 e2638dd8cc440863cc7addeaf5b84888 301 Gene3D G3DSA:3.40.50.620 1 179 8.8E-80 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DA442_14165 e2638dd8cc440863cc7addeaf5b84888 301 SUPERFAMILY SSF52374 1 280 7.32E-106 T 14-10-2018 DA442_14165 e2638dd8cc440863cc7addeaf5b84888 301 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 40.035 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 DA442_14165 e2638dd8cc440863cc7addeaf5b84888 301 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 5.5E-100 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 DA442_14165 e2638dd8cc440863cc7addeaf5b84888 301 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 24 63 8.9E-9 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DA442_10965 38678908cab7ecc553c8e1943bda13ce 787 SUPERFAMILY SSF56672 385 780 1.61E-118 T 14-10-2018 DA442_10965 38678908cab7ecc553c8e1943bda13ce 787 Gene3D G3DSA:3.30.70.2250 41 108 2.7E-41 T 14-10-2018 DA442_10965 38678908cab7ecc553c8e1943bda13ce 787 ProSitePatterns PS00116 DNA polymerase family B signature. 546 554 - T 14-10-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_10965 38678908cab7ecc553c8e1943bda13ce 787 Gene3D G3DSA:2.40.50.590 6 153 2.7E-41 T 14-10-2018 DA442_10965 38678908cab7ecc553c8e1943bda13ce 787 SMART SM00486 153 558 8.8E-68 T 14-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_10965 38678908cab7ecc553c8e1943bda13ce 787 Gene3D G3DSA:3.30.420.10 156 347 1.9E-71 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DA442_10965 38678908cab7ecc553c8e1943bda13ce 787 SUPERFAMILY SSF53098 4 389 3.58E-85 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DA442_10965 38678908cab7ecc553c8e1943bda13ce 787 Gene3D G3DSA:3.90.1600.10 440 636 7.9E-57 T 14-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_10965 38678908cab7ecc553c8e1943bda13ce 787 Gene3D G3DSA:3.90.1600.10 348 439 2.6E-28 T 14-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_10965 38678908cab7ecc553c8e1943bda13ce 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 415 428 1.6E-10 T 14-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_10965 38678908cab7ecc553c8e1943bda13ce 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 544 552 1.6E-10 T 14-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_10965 38678908cab7ecc553c8e1943bda13ce 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 492 504 1.6E-10 T 14-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_10965 38678908cab7ecc553c8e1943bda13ce 787 Pfam PF00136 DNA polymerase family B 377 742 2.8E-42 T 14-10-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_10965 38678908cab7ecc553c8e1943bda13ce 787 Pfam PF03104 DNA polymerase family B, exonuclease domain 75 296 7.5E-20 T 14-10-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_10965 38678908cab7ecc553c8e1943bda13ce 787 Gene3D G3DSA:1.10.132.60 643 787 8.4E-61 T 14-10-2018 DA442_06495 feed5fb45279ea87720f31e46c3b1c88 325 Gene3D G3DSA:1.10.287.110 260 325 9.8E-12 T 14-10-2018 IPR036869 Chaperone J-domain superfamily DA442_06495 feed5fb45279ea87720f31e46c3b1c88 325 SUPERFAMILY SSF46565 269 322 5.23E-13 T 14-10-2018 IPR036869 Chaperone J-domain superfamily DA442_06495 feed5fb45279ea87720f31e46c3b1c88 325 SUPERFAMILY SSF81901 51 144 3.66E-8 T 14-10-2018 DA442_06495 feed5fb45279ea87720f31e46c3b1c88 325 Gene3D G3DSA:1.25.40.10 19 189 1.6E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_04765 ffe123549d96783d004e07c9b768f1a6 453 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 437 7.3E-117 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DA442_04765 ffe123549d96783d004e07c9b768f1a6 453 PIRSF PIRSF006066 1 447 1.5E-136 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DA442_04765 ffe123549d96783d004e07c9b768f1a6 453 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 260 3.5E-85 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DA442_15775 64967c8b6567d19979065c4adad1477c 328 Gene3D G3DSA:2.130.10.10 113 248 4.2E-24 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 DA442_15775 64967c8b6567d19979065c4adad1477c 328 SMART SM00320 151 189 2.1E-5 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 DA442_15775 64967c8b6567d19979065c4adad1477c 328 SMART SM00320 68 106 6.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 DA442_15775 64967c8b6567d19979065c4adad1477c 328 SMART SM00320 285 323 170.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 DA442_15775 64967c8b6567d19979065c4adad1477c 328 SMART SM00320 192 230 0.1 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 DA442_15775 64967c8b6567d19979065c4adad1477c 328 SMART SM00320 233 274 0.64 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 DA442_15775 64967c8b6567d19979065c4adad1477c 328 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 176 190 - T 14-10-2018 IPR019775 WD40 repeat, conserved site DA442_15775 64967c8b6567d19979065c4adad1477c 328 SUPERFAMILY SSF50998 28 328 1.1E-44 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily DA442_15775 64967c8b6567d19979065c4adad1477c 328 Pfam PF13360 PQQ-like domain 170 286 4.1E-5 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat DA442_15775 64967c8b6567d19979065c4adad1477c 328 Gene3D G3DSA:2.130.10.10 10 112 2.7E-6 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 DA442_15775 64967c8b6567d19979065c4adad1477c 328 Gene3D G3DSA:2.130.10.10 249 328 4.3E-6 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 DA442_08555 ce7b6e7cc56f37757d58b0e4b7b36f0b 436 Gene3D G3DSA:1.20.1600.10 22 427 2.0E-82 T 14-10-2018 DA442_08555 ce7b6e7cc56f37757d58b0e4b7b36f0b 436 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 22 430 1.5E-120 T 14-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 DA442_08555 ce7b6e7cc56f37757d58b0e4b7b36f0b 436 Pfam PF02321 Outer membrane efflux protein 24 212 3.7E-27 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DA442_08555 ce7b6e7cc56f37757d58b0e4b7b36f0b 436 Pfam PF02321 Outer membrane efflux protein 233 416 1.7E-30 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DA442_08555 ce7b6e7cc56f37757d58b0e4b7b36f0b 436 SUPERFAMILY SSF56954 23 430 5.36E-88 T 14-10-2018 DA442_11835 4605642be30adfb47e16ec839c737968 209 SUPERFAMILY SSF52833 1 184 3.41E-35 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_11835 4605642be30adfb47e16ec839c737968 209 Gene3D G3DSA:3.40.30.10 1 208 1.7E-58 T 14-10-2018 DA442_11835 4605642be30adfb47e16ec839c737968 209 Pfam PF13743 Thioredoxin 6 175 4.7E-23 T 14-10-2018 DA442_23800 b14dcb673af2f7e5c2f93a05435535d5 168 Gene3D G3DSA:3.40.630.30 17 168 8.0E-36 T 14-10-2018 DA442_23800 b14dcb673af2f7e5c2f93a05435535d5 168 SUPERFAMILY SSF55729 7 162 2.99E-33 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_23800 b14dcb673af2f7e5c2f93a05435535d5 168 Pfam PF00583 Acetyltransferase (GNAT) family 50 157 1.9E-16 T 14-10-2018 IPR000182 GNAT domain DA442_03885 a41227fd9f6c259085e05da6c3c6326a 196 SUPERFAMILY SSF53178 5 194 1.57E-69 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 DA442_03885 a41227fd9f6c259085e05da6c3c6326a 196 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 191 8.9E-69 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 DA442_03885 a41227fd9f6c259085e05da6c3c6326a 196 Gene3D G3DSA:3.40.50.1470 1 196 5.8E-77 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 DA442_03885 a41227fd9f6c259085e05da6c3c6326a 196 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 18 31 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 DA442_03885 a41227fd9f6c259085e05da6c3c6326a 196 Pfam PF01195 Peptidyl-tRNA hydrolase 7 190 2.0E-53 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 DA442_03885 a41227fd9f6c259085e05da6c3c6326a 196 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 5 184 35.725 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 DA442_03885 a41227fd9f6c259085e05da6c3c6326a 196 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 112 122 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 DA442_06585 e3322d0d61802b779f3d622f8cad0f30 105 SUPERFAMILY SSF117782 1 103 4.97E-38 T 14-10-2018 IPR035439 UPF0145 domain superfamily DA442_06585 e3322d0d61802b779f3d622f8cad0f30 105 Gene3D G3DSA:3.30.110.70 1 105 2.6E-33 T 14-10-2018 DA442_06585 e3322d0d61802b779f3d622f8cad0f30 105 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 103 26.224 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 DA442_06585 e3322d0d61802b779f3d622f8cad0f30 105 Pfam PF01906 Putative heavy-metal-binding 1 103 1.2E-39 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 DA442_19485 7a8b39b72aa99052e701e8e121dd1dcd 329 Pfam PF11557 Solitary outer membrane autotransporter beta-barrel domain 12 328 6.0E-114 T 14-10-2018 IPR021621 Solitary outer membrane autotransporter beta-barrel domain DA442_07980 f47406e902a83c8ed02469fdad7eb20a 320 Pfam PF00990 Diguanylate cyclase, GGDEF domain 158 313 3.4E-43 T 14-10-2018 IPR000160 GGDEF domain DA442_07980 f47406e902a83c8ed02469fdad7eb20a 320 SMART SM00267 145 317 1.8E-57 T 14-10-2018 IPR000160 GGDEF domain DA442_07980 f47406e902a83c8ed02469fdad7eb20a 320 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 154 316 1.6E-53 T 14-10-2018 IPR000160 GGDEF domain DA442_07980 f47406e902a83c8ed02469fdad7eb20a 320 Gene3D G3DSA:3.30.70.270 150 319 8.8E-56 T 14-10-2018 DA442_07980 f47406e902a83c8ed02469fdad7eb20a 320 SUPERFAMILY SSF55785 13 93 5.58E-8 T 14-10-2018 IPR035965 PAS domain superfamily DA442_07980 f47406e902a83c8ed02469fdad7eb20a 320 Gene3D G3DSA:3.30.450.20 11 142 8.3E-29 T 14-10-2018 DA442_07980 f47406e902a83c8ed02469fdad7eb20a 320 SUPERFAMILY SSF55073 161 317 7.53E-50 T 14-10-2018 IPR029787 Nucleotide cyclase DA442_05935 e695e993ae8dcb3f0cba1803b943f236 140 Pfam PF05232 Chlorhexidine efflux transporter 69 131 9.5E-22 T 14-10-2018 IPR007896 Chlorhexidine efflux transporter DA442_05935 e695e993ae8dcb3f0cba1803b943f236 140 Pfam PF05232 Chlorhexidine efflux transporter 1 63 6.9E-24 T 14-10-2018 IPR007896 Chlorhexidine efflux transporter DA442_23510 6d07ffb9f0a1ead66a15e46d3db55b61 295 Gene3D G3DSA:1.10.10.10 3 87 4.7E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_23510 6d07ffb9f0a1ead66a15e46d3db55b61 295 Gene3D G3DSA:3.40.190.290 90 289 1.3E-62 T 14-10-2018 DA442_23510 6d07ffb9f0a1ead66a15e46d3db55b61 295 SUPERFAMILY SSF46785 6 110 8.76E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_23510 6d07ffb9f0a1ead66a15e46d3db55b61 295 Pfam PF03466 LysR substrate binding domain 87 289 1.9E-41 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_23510 6d07ffb9f0a1ead66a15e46d3db55b61 295 SUPERFAMILY SSF53850 88 291 7.42E-45 T 14-10-2018 DA442_23510 6d07ffb9f0a1ead66a15e46d3db55b61 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 63 1.1E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_03905 2a59cd1c543fd71155a3e0484e9b94d2 418 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 14-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DA442_03905 2a59cd1c543fd71155a3e0484e9b94d2 418 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 415 4.9E-144 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DA442_03905 2a59cd1c543fd71155a3e0484e9b94d2 418 SUPERFAMILY SSF51735 160 313 7.9E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_03905 2a59cd1c543fd71155a3e0484e9b94d2 418 PIRSF PIRSF000445 1 418 9.1E-157 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DA442_03905 2a59cd1c543fd71155a3e0484e9b94d2 418 Gene3D G3DSA:3.30.460.30 1 156 1.8E-55 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DA442_03905 2a59cd1c543fd71155a3e0484e9b94d2 418 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 3.9E-49 T 14-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DA442_03905 2a59cd1c543fd71155a3e0484e9b94d2 418 SUPERFAMILY SSF69742 1 156 5.62E-47 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DA442_03905 2a59cd1c543fd71155a3e0484e9b94d2 418 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 30.723 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DA442_03905 2a59cd1c543fd71155a3e0484e9b94d2 418 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 170 304 2.8E-50 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase DA442_03905 2a59cd1c543fd71155a3e0484e9b94d2 418 Gene3D G3DSA:3.40.50.720 159 311 2.8E-45 T 14-10-2018 DA442_03905 2a59cd1c543fd71155a3e0484e9b94d2 418 SUPERFAMILY SSF69075 315 416 3.66E-29 T 14-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DA442_03905 2a59cd1c543fd71155a3e0484e9b94d2 418 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 318 414 6.3E-24 T 14-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DA442_22020 cbede299f31f1950bc93ce22b65dc05c 253 SMART SM00448 20 131 1.5E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_22020 cbede299f31f1950bc93ce22b65dc05c 253 Pfam PF00072 Response regulator receiver domain 22 131 2.4E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_22020 cbede299f31f1950bc93ce22b65dc05c 253 SMART SM00862 173 249 9.3E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DA442_22020 cbede299f31f1950bc93ce22b65dc05c 253 Pfam PF00486 Transcriptional regulatory protein, C terminal 174 249 1.9E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DA442_22020 cbede299f31f1950bc93ce22b65dc05c 253 SUPERFAMILY SSF46894 149 250 5.1E-27 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DA442_22020 cbede299f31f1950bc93ce22b65dc05c 253 Gene3D G3DSA:3.40.50.2300 6 139 5.4E-35 T 14-10-2018 DA442_22020 cbede299f31f1950bc93ce22b65dc05c 253 SUPERFAMILY SSF52172 21 144 1.85E-34 T 14-10-2018 IPR011006 CheY-like superfamily DA442_22020 cbede299f31f1950bc93ce22b65dc05c 253 Gene3D G3DSA:1.10.10.10 140 252 1.3E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_18965 be3c46aee3bd47f1f665c1d9fbf9d360 272 SMART SM00052 13 260 6.0E-13 T 14-10-2018 IPR001633 EAL domain DA442_18965 be3c46aee3bd47f1f665c1d9fbf9d360 272 Gene3D G3DSA:3.20.20.450 22 270 4.2E-48 T 14-10-2018 IPR035919 EAL domain superfamily DA442_18965 be3c46aee3bd47f1f665c1d9fbf9d360 272 SUPERFAMILY SSF141868 25 264 2.62E-51 T 14-10-2018 IPR035919 EAL domain superfamily DA442_18965 be3c46aee3bd47f1f665c1d9fbf9d360 272 Pfam PF00563 EAL domain 28 255 5.0E-45 T 14-10-2018 IPR001633 EAL domain DA442_12910 cff91e61e5314a3266f267ae3ca8a02d 185 SUPERFAMILY SSF54534 109 184 3.01E-10 T 14-10-2018 DA442_12910 cff91e61e5314a3266f267ae3ca8a02d 185 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 110 184 3.0E-7 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 DA442_12910 cff91e61e5314a3266f267ae3ca8a02d 185 Gene3D G3DSA:3.10.50.30 105 185 1.1E-6 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 DA442_02275 a893671035d3d515bb610a7dc544dd4e 245 Gene3D G3DSA:1.10.760.10 26 210 1.2E-16 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_02275 a893671035d3d515bb610a7dc544dd4e 245 SUPERFAMILY SSF46626 16 208 6.59E-50 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_02275 a893671035d3d515bb610a7dc544dd4e 245 Pfam PF02167 Cytochrome C1 family 33 244 5.3E-16 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 DA442_19895 1d3be3324ceb8c734e6f98340955b79a 189 ProSitePatterns PS00893 Nudix box signature. 86 107 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DA442_19895 1d3be3324ceb8c734e6f98340955b79a 189 SUPERFAMILY SSF55811 19 187 1.9E-44 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DA442_19895 1d3be3324ceb8c734e6f98340955b79a 189 Gene3D G3DSA:3.90.79.10 16 185 7.7E-47 T 14-10-2018 DA442_19895 1d3be3324ceb8c734e6f98340955b79a 189 Pfam PF00293 NUDIX domain 50 166 1.9E-16 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DA442_21870 5d0d51b8c26ac784c76377f471757ed0 256 Pfam PF12838 4Fe-4S dicluster domain 64 119 8.4E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DA442_21870 5d0d51b8c26ac784c76377f471757ed0 256 TIGRFAM TIGR00397 mauM_napG: MauM/NapG family ferredoxin-type protein 11 221 9.3E-78 T 14-10-2018 IPR004494 MauM/NapG ferredoxin-type protein DA442_21870 5d0d51b8c26ac784c76377f471757ed0 256 Pfam PF12800 4Fe-4S binding domain 141 159 0.027 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DA442_21870 5d0d51b8c26ac784c76377f471757ed0 256 Pfam PF12800 4Fe-4S binding domain 188 200 0.81 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DA442_21870 5d0d51b8c26ac784c76377f471757ed0 256 SUPERFAMILY SSF54862 63 209 1.32E-24 T 14-10-2018 DA442_21870 5d0d51b8c26ac784c76377f471757ed0 256 Gene3D G3DSA:3.30.70.20 139 223 4.5E-10 T 14-10-2018 DA442_21870 5d0d51b8c26ac784c76377f471757ed0 256 Gene3D G3DSA:3.30.70.20 60 136 8.0E-10 T 14-10-2018 DA442_21870 5d0d51b8c26ac784c76377f471757ed0 256 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 11 42 9.4E-4 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DA442_21870 5d0d51b8c26ac784c76377f471757ed0 256 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 65 76 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DA442_05720 2ef9c001be3efbe4ee00b363535b03ed 426 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 10 418 4.8E-178 T 14-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 DA442_05720 2ef9c001be3efbe4ee00b363535b03ed 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 239 276 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DA442_05720 2ef9c001be3efbe4ee00b363535b03ed 426 Gene3D G3DSA:3.40.640.10 58 327 3.5E-169 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_05720 2ef9c001be3efbe4ee00b363535b03ed 426 SUPERFAMILY SSF53383 4 420 1.0E-135 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_05720 2ef9c001be3efbe4ee00b363535b03ed 426 Gene3D G3DSA:3.90.1150.10 8 412 3.5E-169 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DA442_05720 2ef9c001be3efbe4ee00b363535b03ed 426 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 421 48.905 T 14-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 DA442_05720 2ef9c001be3efbe4ee00b363535b03ed 426 PIRSF PIRSF000521 23 421 5.5E-36 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DA442_05720 2ef9c001be3efbe4ee00b363535b03ed 426 Pfam PF00202 Aminotransferase class-III 24 418 1.4E-128 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DA442_04360 378e01daad181bacd619d4ad61df577e 523 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 411 498 6.6E-24 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 DA442_04360 378e01daad181bacd619d4ad61df577e 523 SUPERFAMILY SSF55604 438 510 2.62E-20 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DA442_04360 378e01daad181bacd619d4ad61df577e 523 Gene3D G3DSA:3.30.1360.60 434 514 5.4E-25 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DA442_04360 378e01daad181bacd619d4ad61df577e 523 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 509 3.9E-207 T 14-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 DA442_04360 378e01daad181bacd619d4ad61df577e 523 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 451 468 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DA442_04360 378e01daad181bacd619d4ad61df577e 523 Pfam PF00367 phosphotransferase system, EIIB 440 473 2.9E-13 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DA442_04360 378e01daad181bacd619d4ad61df577e 523 Pfam PF02378 Phosphotransferase system, EIIC 11 353 1.1E-66 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DA442_06205 ad327bc8b4fabe66da4fe4f96d17940a 171 Gene3D G3DSA:3.40.630.30 4 167 1.8E-34 T 14-10-2018 DA442_06205 ad327bc8b4fabe66da4fe4f96d17940a 171 Pfam PF00583 Acetyltransferase (GNAT) family 44 143 1.4E-15 T 14-10-2018 IPR000182 GNAT domain DA442_06205 ad327bc8b4fabe66da4fe4f96d17940a 171 SUPERFAMILY SSF55729 1 152 5.15E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_01520 dc8e1b2b869c12c3d75eecb65f278b23 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.103 T 14-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 DA442_01520 dc8e1b2b869c12c3d75eecb65f278b23 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 8.5E-51 T 14-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01520 dc8e1b2b869c12c3d75eecb65f278b23 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 1.6E-31 T 14-10-2018 IPR021131 Ribosomal protein L18e/L15P DA442_01520 dc8e1b2b869c12c3d75eecb65f278b23 144 Gene3D G3DSA:3.100.10.10 70 144 2.7E-13 T 14-10-2018 DA442_01520 dc8e1b2b869c12c3d75eecb65f278b23 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 14-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01520 dc8e1b2b869c12c3d75eecb65f278b23 144 SUPERFAMILY SSF52080 4 143 1.44E-46 T 14-10-2018 IPR036227 Ribosomal L18e/L15P superfamily DA442_12840 a8773241d069147ad6132a78619df7b7 168 Pfam PF13302 Acetyltransferase (GNAT) domain 30 139 1.4E-19 T 14-10-2018 IPR000182 GNAT domain DA442_12840 a8773241d069147ad6132a78619df7b7 168 SUPERFAMILY SSF55729 3 146 4.37E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_12840 a8773241d069147ad6132a78619df7b7 168 Gene3D G3DSA:3.40.630.30 1 148 1.0E-25 T 14-10-2018 DA442_05930 577e0caa5ac62b36d154fb579a410930 294 Pfam PF03466 LysR substrate binding domain 91 247 1.0E-20 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_05930 577e0caa5ac62b36d154fb579a410930 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.3E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_05930 577e0caa5ac62b36d154fb579a410930 294 SUPERFAMILY SSF46785 3 84 2.75E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_05930 577e0caa5ac62b36d154fb579a410930 294 Gene3D G3DSA:1.10.10.10 2 87 1.6E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_05930 577e0caa5ac62b36d154fb579a410930 294 Gene3D G3DSA:3.40.190.290 93 289 1.3E-36 T 14-10-2018 DA442_05930 577e0caa5ac62b36d154fb579a410930 294 SUPERFAMILY SSF53850 92 292 2.33E-26 T 14-10-2018 DA442_17595 8fd7919ab48f72f85a3dade3322fb33c 392 Gene3D G3DSA:1.10.443.10 204 379 9.3E-29 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DA442_17595 8fd7919ab48f72f85a3dade3322fb33c 392 SUPERFAMILY SSF56349 95 376 5.0E-45 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DA442_17595 8fd7919ab48f72f85a3dade3322fb33c 392 Pfam PF17293 Arm DNA-binding domain 3 81 6.2E-7 T 14-10-2018 IPR035386 Arm, DNA-binding domain DA442_17595 8fd7919ab48f72f85a3dade3322fb33c 392 Gene3D G3DSA:1.10.150.130 87 203 2.4E-18 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal DA442_17595 8fd7919ab48f72f85a3dade3322fb33c 392 Pfam PF13102 Phage integrase SAM-like domain 94 194 2.1E-24 T 14-10-2018 IPR025269 Phage integrase SAM-like domain DA442_17595 8fd7919ab48f72f85a3dade3322fb33c 392 Pfam PF00589 Phage integrase family 208 366 5.6E-18 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DA442_19275 d75adc204701e0e67b20117c1f37604f 227 SUPERFAMILY SSF160467 9 97 2.22E-12 T 14-10-2018 DA442_19275 d75adc204701e0e67b20117c1f37604f 227 Gene3D G3DSA:3.30.1360.40 7 77 1.0E-10 T 14-10-2018 DA442_19275 d75adc204701e0e67b20117c1f37604f 227 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 8 197 2.7E-52 T 14-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D DA442_19275 d75adc204701e0e67b20117c1f37604f 227 Gene3D G3DSA:2.40.100.10 91 226 1.4E-43 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily DA442_19275 d75adc204701e0e67b20117c1f37604f 227 SUPERFAMILY SSF50891 93 220 2.2E-33 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily DA442_19275 d75adc204701e0e67b20117c1f37604f 227 SMART SM00796 6 203 2.2E-68 T 14-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D DA442_24385 d7ca4162def059dad0ad4e4a159177a7 342 SMART SM00354 12 82 9.7E-28 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DA442_24385 d7ca4162def059dad0ad4e4a159177a7 342 Gene3D G3DSA:3.40.50.2300 74 318 2.3E-82 T 14-10-2018 DA442_24385 d7ca4162def059dad0ad4e4a159177a7 342 SUPERFAMILY SSF53822 70 333 3.85E-49 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DA442_24385 d7ca4162def059dad0ad4e4a159177a7 342 Pfam PF13377 Periplasmic binding protein-like domain 179 339 1.4E-26 T 14-10-2018 DA442_24385 d7ca4162def059dad0ad4e4a159177a7 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 14 59 5.5E-18 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DA442_24385 d7ca4162def059dad0ad4e4a159177a7 342 SUPERFAMILY SSF47413 12 70 4.31E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DA442_24385 d7ca4162def059dad0ad4e4a159177a7 342 Gene3D G3DSA:1.10.260.40 5 70 6.5E-22 T 14-10-2018 DA442_24385 d7ca4162def059dad0ad4e4a159177a7 342 Gene3D G3DSA:3.40.50.2300 168 301 2.3E-82 T 14-10-2018 DA442_24385 d7ca4162def059dad0ad4e4a159177a7 342 ProSitePatterns PS00356 LacI-type HTH domain signature. 15 33 - T 14-10-2018 DA442_04505 c18cbc177800c78aff74d8d9e46f4e0f 577 SMART SM00836 461 577 7.9E-43 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 DA442_04505 c18cbc177800c78aff74d8d9e46f4e0f 577 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 577 6.8E-200 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DA442_04505 c18cbc177800c78aff74d8d9e46f4e0f 577 Gene3D G3DSA:3.30.1360.70 1 106 1.7E-33 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 DA442_04505 c18cbc177800c78aff74d8d9e46f4e0f 577 Pfam PF00750 tRNA synthetases class I (R) 98 447 2.6E-162 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 DA442_04505 c18cbc177800c78aff74d8d9e46f4e0f 577 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 577 28.167 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DA442_04505 c18cbc177800c78aff74d8d9e46f4e0f 577 Pfam PF05746 DALR anticodon binding domain 461 577 4.1E-37 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 DA442_04505 c18cbc177800c78aff74d8d9e46f4e0f 577 Gene3D G3DSA:3.40.50.620 108 454 6.6E-109 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DA442_04505 c18cbc177800c78aff74d8d9e46f4e0f 577 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DA442_04505 c18cbc177800c78aff74d8d9e46f4e0f 577 SMART SM01016 5 87 2.0E-28 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DA442_04505 c18cbc177800c78aff74d8d9e46f4e0f 577 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 2.8E-20 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DA442_04505 c18cbc177800c78aff74d8d9e46f4e0f 577 Gene3D G3DSA:1.10.730.10 455 577 1.8E-36 T 14-10-2018 DA442_04505 c18cbc177800c78aff74d8d9e46f4e0f 577 SUPERFAMILY SSF55190 2 96 3.66E-22 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 DA442_04505 c18cbc177800c78aff74d8d9e46f4e0f 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 3.6E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DA442_04505 c18cbc177800c78aff74d8d9e46f4e0f 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 3.6E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DA442_04505 c18cbc177800c78aff74d8d9e46f4e0f 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 3.6E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DA442_04505 c18cbc177800c78aff74d8d9e46f4e0f 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 304 325 3.6E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DA442_04505 c18cbc177800c78aff74d8d9e46f4e0f 577 SUPERFAMILY SSF47323 455 577 2.68E-36 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DA442_04505 c18cbc177800c78aff74d8d9e46f4e0f 577 SUPERFAMILY SSF52374 110 454 4.3E-94 T 14-10-2018 DA442_03615 b86da745c8026cfe38ff3e3f2a0359ed 225 Gene3D G3DSA:1.10.3720.10 12 225 7.5E-51 T 14-10-2018 IPR035906 MetI-like superfamily DA442_03615 b86da745c8026cfe38ff3e3f2a0359ed 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 223 8.7E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DA442_03615 b86da745c8026cfe38ff3e3f2a0359ed 225 SUPERFAMILY SSF161098 15 210 7.59E-47 T 14-10-2018 IPR035906 MetI-like superfamily DA442_17600 d75946140713eacea4fd40f4acd9076a 453 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 10 453 4.7E-101 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 DA442_17600 d75946140713eacea4fd40f4acd9076a 453 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 215 370 3.4E-22 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DA442_17600 d75946140713eacea4fd40f4acd9076a 453 Pfam PF01926 50S ribosome-binding GTPase 217 306 1.2E-23 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DA442_17600 d75946140713eacea4fd40f4acd9076a 453 Gene3D G3DSA:3.30.1360.120 1 120 4.4E-39 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 DA442_17600 d75946140713eacea4fd40f4acd9076a 453 Gene3D G3DSA:1.20.120.430 121 453 1.9E-103 T 14-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 DA442_17600 d75946140713eacea4fd40f4acd9076a 453 SUPERFAMILY SSF116878 120 453 1.03E-52 T 14-10-2018 DA442_17600 d75946140713eacea4fd40f4acd9076a 453 SUPERFAMILY SSF52540 70 371 5.04E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_17600 d75946140713eacea4fd40f4acd9076a 453 Pfam PF12631 MnmE helical domain 122 450 1.2E-61 T 14-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 DA442_17600 d75946140713eacea4fd40f4acd9076a 453 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 4 453 32.908 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 DA442_17600 d75946140713eacea4fd40f4acd9076a 453 Gene3D G3DSA:3.40.50.300 216 381 1.9E-103 T 14-10-2018 DA442_17600 d75946140713eacea4fd40f4acd9076a 453 Pfam PF10396 GTP-binding protein TrmE N-terminus 5 119 1.9E-35 T 14-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 DA442_09175 60883b67336d69068c1015957a5273fa 181 SMART SM01118 10 181 2.5E-16 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 DA442_09175 60883b67336d69068c1015957a5273fa 181 ProDom PD009560 CYCLASE ADENYLATE CYCLASE ADENYLYL CYAB LYASE CLASS CYAB-TYPE THERMOPHILIC MJ0240 11 139 9.0E-8 T 14-10-2018 DA442_09175 60883b67336d69068c1015957a5273fa 181 Pfam PF01928 CYTH domain 11 175 9.3E-19 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 DA442_09175 60883b67336d69068c1015957a5273fa 181 TIGRFAM TIGR00318 cyaB: putative adenylyl cyclase CyaB 11 180 1.3E-17 T 14-10-2018 IPR008173 Adenylyl cyclase CyaB KEGG: 00230+4.6.1.1 DA442_09175 60883b67336d69068c1015957a5273fa 181 Gene3D G3DSA:2.40.320.10 1 181 2.4E-51 T 14-10-2018 DA442_09175 60883b67336d69068c1015957a5273fa 181 SUPERFAMILY SSF55154 11 179 5.07E-39 T 14-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 DA442_11245 ab8d31d05caed828a97d8986f96c84c8 251 Gene3D G3DSA:3.40.50.150 15 248 2.0E-40 T 14-10-2018 DA442_11245 ab8d31d05caed828a97d8986f96c84c8 251 Pfam PF13649 Methyltransferase domain 42 136 1.2E-17 T 14-10-2018 DA442_11245 ab8d31d05caed828a97d8986f96c84c8 251 Gene3D G3DSA:2.20.25.110 144 209 2.0E-40 T 14-10-2018 DA442_11245 ab8d31d05caed828a97d8986f96c84c8 251 SUPERFAMILY SSF53335 15 250 2.31E-38 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_08220 d2bcfba467d58b9de399bddc7e670059 219 Pfam PF11205 Protein of unknown function (DUF2987) 21 165 2.5E-52 T 14-10-2018 IPR021370 Protein of unknown function DUF2987 DA442_16340 1acf919d63f30d7798950d4ca9a72fa2 650 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 3.2E-20 T 14-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 DA442_16340 1acf919d63f30d7798950d4ca9a72fa2 650 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 14-10-2018 IPR020845 AMP-binding, conserved site DA442_16340 1acf919d63f30d7798950d4ca9a72fa2 650 Gene3D G3DSA:3.30.300.30 519 650 5.6E-31 T 14-10-2018 DA442_16340 1acf919d63f30d7798950d4ca9a72fa2 650 SUPERFAMILY SSF56801 9 644 2.09E-182 T 14-10-2018 DA442_16340 1acf919d63f30d7798950d4ca9a72fa2 650 Pfam PF00501 AMP-binding enzyme 83 523 1.7E-91 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DA442_16340 1acf919d63f30d7798950d4ca9a72fa2 650 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 646 52.423 T 14-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 DA442_16340 1acf919d63f30d7798950d4ca9a72fa2 650 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 644 0.0 T 14-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 DA442_16340 1acf919d63f30d7798950d4ca9a72fa2 650 Gene3D G3DSA:3.40.50.12780 50 516 1.8E-103 T 14-10-2018 DA442_16340 1acf919d63f30d7798950d4ca9a72fa2 650 Pfam PF13193 AMP-binding enzyme C-terminal domain 532 610 2.8E-25 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain DA442_01595 bf88d44f31480776d2563493f1bc12c0 304 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 55 69 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DA442_01595 bf88d44f31480776d2563493f1bc12c0 304 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 52 261 7.2E-46 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 DA442_01595 bf88d44f31480776d2563493f1bc12c0 304 Gene3D G3DSA:3.40.1010.10 49 165 1.4E-44 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 DA442_01595 bf88d44f31480776d2563493f1bc12c0 304 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 50 283 1.6E-93 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DA442_01595 bf88d44f31480776d2563493f1bc12c0 304 Gene3D G3DSA:3.30.950.10 166 303 8.4E-45 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 DA442_01595 bf88d44f31480776d2563493f1bc12c0 304 SUPERFAMILY SSF53790 46 292 6.94E-80 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 DA442_25925 f2a033ab62c6fae1312462916a5faf48 119 SUPERFAMILY SSF52833 41 118 3.91E-19 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_25925 f2a033ab62c6fae1312462916a5faf48 119 Gene3D G3DSA:3.40.30.10 20 118 2.4E-14 T 14-10-2018 DA442_25925 f2a033ab62c6fae1312462916a5faf48 119 Pfam PF00462 Glutaredoxin 43 96 1.6E-11 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 DA442_01915 e2e5f686d5281c6f86ca951b78e4cc8e 470 SUPERFAMILY SSF50800 70 167 2.97E-29 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily DA442_01915 e2e5f686d5281c6f86ca951b78e4cc8e 470 Gene3D G3DSA:3.40.1380.20 336 467 2.6E-41 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DA442_01915 e2e5f686d5281c6f86ca951b78e4cc8e 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 14-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DA442_01915 e2e5f686d5281c6f86ca951b78e4cc8e 470 Gene3D G3DSA:2.40.33.10 71 167 1.8E-148 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DA442_01915 e2e5f686d5281c6f86ca951b78e4cc8e 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 340 1.6E-155 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DA442_01915 e2e5f686d5281c6f86ca951b78e4cc8e 470 SUPERFAMILY SSF51621 1 339 4.19E-103 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DA442_01915 e2e5f686d5281c6f86ca951b78e4cc8e 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 1.5E-79 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DA442_01915 e2e5f686d5281c6f86ca951b78e4cc8e 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 1.5E-79 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DA442_01915 e2e5f686d5281c6f86ca951b78e4cc8e 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 1.5E-79 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DA442_01915 e2e5f686d5281c6f86ca951b78e4cc8e 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 1.5E-79 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DA442_01915 e2e5f686d5281c6f86ca951b78e4cc8e 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 1.5E-79 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DA442_01915 e2e5f686d5281c6f86ca951b78e4cc8e 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 1.5E-79 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DA442_01915 e2e5f686d5281c6f86ca951b78e4cc8e 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 1.5E-79 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DA442_01915 e2e5f686d5281c6f86ca951b78e4cc8e 470 Gene3D G3DSA:3.20.20.60 4 332 1.8E-148 T 14-10-2018 DA442_01915 e2e5f686d5281c6f86ca951b78e4cc8e 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 5.7E-28 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DA442_01915 e2e5f686d5281c6f86ca951b78e4cc8e 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 2.5E-188 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DA442_01915 e2e5f686d5281c6f86ca951b78e4cc8e 470 SUPERFAMILY SSF52935 323 469 2.88E-34 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DA442_04445 ca8e63a77e6b49267c5963422172e8bd 401 SUPERFAMILY SSF51230 1 95 4.19E-24 T 14-10-2018 IPR011053 Single hybrid motif DA442_04445 ca8e63a77e6b49267c5963422172e8bd 401 SUPERFAMILY SSF47005 107 150 4.58E-12 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 DA442_04445 ca8e63a77e6b49267c5963422172e8bd 401 Gene3D G3DSA:4.10.320.10 102 152 6.9E-22 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 DA442_04445 ca8e63a77e6b49267c5963422172e8bd 401 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 401 7.1E-188 T 14-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 DA442_04445 ca8e63a77e6b49267c5963422172e8bd 401 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 DA442_04445 ca8e63a77e6b49267c5963422172e8bd 401 Gene3D G3DSA:3.30.559.10 169 401 6.2E-98 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 DA442_04445 ca8e63a77e6b49267c5963422172e8bd 401 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 171 399 3.0E-82 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 DA442_04445 ca8e63a77e6b49267c5963422172e8bd 401 Pfam PF00364 Biotin-requiring enzyme 4 76 2.2E-18 T 14-10-2018 IPR000089 Biotin/lipoyl attachment DA442_04445 ca8e63a77e6b49267c5963422172e8bd 401 Gene3D G3DSA:2.40.50.100 1 80 3.5E-22 T 14-10-2018 DA442_04445 ca8e63a77e6b49267c5963422172e8bd 401 Pfam PF02817 e3 binding domain 113 146 6.9E-13 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 DA442_04445 ca8e63a77e6b49267c5963422172e8bd 401 SUPERFAMILY SSF52777 171 400 3.11E-90 T 14-10-2018 DA442_00810 5cdf5bd9f081ee75c8f5d966b05460fe 470 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 369 389 - T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 DA442_00810 5cdf5bd9f081ee75c8f5d966b05460fe 470 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 24 451 9.8E-128 T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 DA442_00810 5cdf5bd9f081ee75c8f5d966b05460fe 470 TIGRFAM TIGR03173 pbuX: xanthine permease 34 453 6.3E-132 T 14-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 DA442_00810 5cdf5bd9f081ee75c8f5d966b05460fe 470 Pfam PF00860 Permease family 29 421 4.8E-99 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 DA442_06535 5799c980eb56502d93126f7130e05a69 565 Gene3D G3DSA:3.40.1770.10 22 544 2.1E-258 T 14-10-2018 DA442_06535 5799c980eb56502d93126f7130e05a69 565 Gene3D G3DSA:3.40.50.10730 147 351 2.1E-258 T 14-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DA442_06535 5799c980eb56502d93126f7130e05a69 565 Pfam PF17391 Urocanase N-terminal domain 17 143 9.3E-63 T 14-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DA442_06535 5799c980eb56502d93126f7130e05a69 565 Pfam PF17392 Urocanase C-terminal domain 354 548 8.8E-92 T 14-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DA442_06535 5799c980eb56502d93126f7130e05a69 565 PIRSF PIRSF001423 1 563 4.7E-295 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DA442_06535 5799c980eb56502d93126f7130e05a69 565 ProSitePatterns PS01233 Urocanase signature. 444 459 - T 14-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DA442_06535 5799c980eb56502d93126f7130e05a69 565 SUPERFAMILY SSF111326 11 557 6.02E-260 T 14-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DA442_06535 5799c980eb56502d93126f7130e05a69 565 Hamap MF_00577 Urocanate hydratase [hutU]. 2 558 49.421 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DA442_06535 5799c980eb56502d93126f7130e05a69 565 Pfam PF01175 Urocanase Rossmann-like domain 146 351 1.5E-84 T 14-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DA442_06535 5799c980eb56502d93126f7130e05a69 565 TIGRFAM TIGR01228 hutU: urocanate hydratase 15 556 4.9E-292 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DA442_24990 2ed24da6deef8217cb9015b65649f553 274 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 5 215 1.2E-15 T 14-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 DA442_24990 2ed24da6deef8217cb9015b65649f553 274 SUPERFAMILY SSF53649 2 259 1.19E-48 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DA442_24990 2ed24da6deef8217cb9015b65649f553 274 Gene3D G3DSA:3.40.720.10 3 271 6.5E-31 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DA442_10605 f4ecbc28958410a8cf88cf2a89f9e753 346 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 66 339 6.0E-75 T 14-10-2018 IPR006507 Uncharacterised protein family UPF0283 DA442_10605 f4ecbc28958410a8cf88cf2a89f9e753 346 Pfam PF05128 Domain of unknown function (DUF697) 181 339 3.2E-49 T 14-10-2018 IPR021147 Protein of unknown function DUF697 DA442_10605 f4ecbc28958410a8cf88cf2a89f9e753 346 Hamap MF_01085 UPF0283 membrane protein YcjF [ycjF]. 3 346 34.029 T 14-10-2018 IPR006507 Uncharacterised protein family UPF0283 DA442_22880 11228f334eb7d4149919fb8a7f914fd8 161 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 32 63 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DA442_22880 11228f334eb7d4149919fb8a7f914fd8 161 SUPERFAMILY SSF88946 4 87 2.04E-16 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DA442_22880 11228f334eb7d4149919fb8a7f914fd8 161 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 8 154 1.3E-17 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DA442_22880 11228f334eb7d4149919fb8a7f914fd8 161 Gene3D G3DSA:1.10.10.10 95 158 8.7E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_22880 11228f334eb7d4149919fb8a7f914fd8 161 Pfam PF08281 Sigma-70, region 4 103 154 2.2E-10 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DA442_22880 11228f334eb7d4149919fb8a7f914fd8 161 Pfam PF04542 Sigma-70 region 2 14 75 7.3E-13 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DA442_22880 11228f334eb7d4149919fb8a7f914fd8 161 SUPERFAMILY SSF88659 99 156 1.09E-11 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DA442_22880 11228f334eb7d4149919fb8a7f914fd8 161 Gene3D G3DSA:1.10.1740.10 1 78 2.3E-15 T 14-10-2018 DA442_11890 467baae29c0cf786855b49c27471e570 429 Gene3D G3DSA:1.20.120.160 310 421 1.2E-20 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 DA442_11890 467baae29c0cf786855b49c27471e570 429 SUPERFAMILY SSF47226 309 422 2.09E-20 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 DA442_11890 467baae29c0cf786855b49c27471e570 429 Pfam PF01627 Hpt domain 333 409 7.2E-12 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 DA442_02960 d791fed0485a22395377ad57c59020c1 331 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 7 305 1.1E-76 T 14-10-2018 IPR011862 Phosphate binding protein GO:0042301 DA442_02960 d791fed0485a22395377ad57c59020c1 331 SUPERFAMILY SSF53850 38 315 4.35E-65 T 14-10-2018 DA442_02960 d791fed0485a22395377ad57c59020c1 331 Gene3D G3DSA:3.40.190.10 37 307 1.6E-99 T 14-10-2018 DA442_02960 d791fed0485a22395377ad57c59020c1 331 Pfam PF12849 PBP superfamily domain 34 291 1.3E-29 T 14-10-2018 IPR024370 PBP domain DA442_02960 d791fed0485a22395377ad57c59020c1 331 Gene3D G3DSA:3.40.190.10 121 263 1.6E-99 T 14-10-2018 DA442_13470 4d401f3576119a039515b9b71d7d58b2 177 ProDom PD016592 ACTIVATOR TRANSCRIPTIONAL FLAGELLUM FLAGELLAR TRANSCRIPTION FLHC RNA DNA-BINDING REGULATION DNA-DIRECTED 5 163 1.0E-9 T 14-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 DA442_13470 4d401f3576119a039515b9b71d7d58b2 177 SUPERFAMILY SSF160930 5 163 2.48E-34 T 14-10-2018 DA442_13470 4d401f3576119a039515b9b71d7d58b2 177 Pfam PF05280 Flagellar transcriptional activator (FlhC) 10 167 6.4E-17 T 14-10-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 DA442_04020 e86cdad56a2fb77efc038987b2dcd0f5 319 SUPERFAMILY SSF56925 18 171 2.04E-29 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DA442_04020 e86cdad56a2fb77efc038987b2dcd0f5 319 Gene3D G3DSA:3.30.1330.60 183 318 8.1E-42 T 14-10-2018 IPR036737 OmpA-like domain superfamily DA442_04020 e86cdad56a2fb77efc038987b2dcd0f5 319 Pfam PF01389 OmpA-like transmembrane domain 18 170 4.8E-32 T 14-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 DA442_04020 e86cdad56a2fb77efc038987b2dcd0f5 319 SUPERFAMILY SSF103088 184 310 2.62E-38 T 14-10-2018 IPR036737 OmpA-like domain superfamily DA442_04020 e86cdad56a2fb77efc038987b2dcd0f5 319 Pfam PF00691 OmpA family 210 304 1.0E-24 T 14-10-2018 IPR006665 OmpA-like domain DA442_04020 e86cdad56a2fb77efc038987b2dcd0f5 319 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 273 292 2.8E-6 T 14-10-2018 DA442_04020 e86cdad56a2fb77efc038987b2dcd0f5 319 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 293 313 2.8E-6 T 14-10-2018 DA442_04020 e86cdad56a2fb77efc038987b2dcd0f5 319 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 255 272 2.8E-6 T 14-10-2018 DA442_04020 e86cdad56a2fb77efc038987b2dcd0f5 319 Gene3D G3DSA:2.40.160.20 5 182 8.3E-39 T 14-10-2018 DA442_04020 e86cdad56a2fb77efc038987b2dcd0f5 319 PRINTS PR01021 OMPA domain signature 255 271 6.9E-16 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DA442_04020 e86cdad56a2fb77efc038987b2dcd0f5 319 PRINTS PR01021 OMPA domain signature 210 232 6.9E-16 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DA442_04020 e86cdad56a2fb77efc038987b2dcd0f5 319 PRINTS PR01021 OMPA domain signature 240 255 6.9E-16 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DA442_03690 90c69519e22f000133e3d8dbab10842f 267 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 86 250 2.3E-47 T 14-10-2018 IPR012997 Rare lipoprotein A DA442_03690 90c69519e22f000133e3d8dbab10842f 267 SUPERFAMILY SSF50685 88 175 1.15E-10 T 14-10-2018 IPR036908 RlpA-like domain superfamily DA442_03690 90c69519e22f000133e3d8dbab10842f 267 SUPERFAMILY SSF110997 189 262 2.75E-13 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 DA442_03690 90c69519e22f000133e3d8dbab10842f 267 Pfam PF05036 Sporulation related domain 190 260 4.8E-12 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 DA442_03690 90c69519e22f000133e3d8dbab10842f 267 Gene3D G3DSA:3.30.70.1070 192 263 5.8E-5 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 DA442_03690 90c69519e22f000133e3d8dbab10842f 267 Pfam PF03330 Lytic transglycolase 84 173 3.5E-28 T 14-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain DA442_03690 90c69519e22f000133e3d8dbab10842f 267 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 12 176 25.266 T 14-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 DA442_03690 90c69519e22f000133e3d8dbab10842f 267 Gene3D G3DSA:2.40.40.10 83 177 1.2E-38 T 14-10-2018 IPR036908 RlpA-like domain superfamily DA442_14500 c1b42f8910b4832d30aa007656f68798 263 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 171 233 8.6E-6 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core DA442_14500 c1b42f8910b4832d30aa007656f68798 263 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 28 101 3.2E-28 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core DA442_14500 c1b42f8910b4832d30aa007656f68798 263 Gene3D G3DSA:1.10.287.1080 2 126 8.0E-46 T 14-10-2018 DA442_14500 c1b42f8910b4832d30aa007656f68798 263 TIGRFAM TIGR00444 mazG: MazG family protein 11 260 1.6E-102 T 14-10-2018 IPR011551 NTP pyrophosphohydrolase MazG DA442_14500 c1b42f8910b4832d30aa007656f68798 263 SUPERFAMILY SSF101386 138 237 8.41E-24 T 14-10-2018 DA442_14500 c1b42f8910b4832d30aa007656f68798 263 SUPERFAMILY SSF101386 3 105 5.52E-25 T 14-10-2018 DA442_14500 c1b42f8910b4832d30aa007656f68798 263 Gene3D G3DSA:1.10.287.1080 132 263 1.8E-45 T 14-10-2018 DA442_12105 3320ec689d6c695c82d672f5faa286ec 368 Gene3D G3DSA:3.60.40.10 164 344 2.8E-6 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DA442_12105 3320ec689d6c695c82d672f5faa286ec 368 SMART SM00448 20 132 1.1E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_12105 3320ec689d6c695c82d672f5faa286ec 368 SUPERFAMILY SSF52172 19 137 1.38E-34 T 14-10-2018 IPR011006 CheY-like superfamily DA442_12105 3320ec689d6c695c82d672f5faa286ec 368 Gene3D G3DSA:3.40.50.2300 8 148 3.1E-35 T 14-10-2018 DA442_12105 3320ec689d6c695c82d672f5faa286ec 368 Pfam PF00072 Response regulator receiver domain 22 132 7.4E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_01835 92629e8a7489c419c3b70e3485810bbb 284 SUPERFAMILY SSF46565 215 278 7.63E-17 T 14-10-2018 IPR036869 Chaperone J-domain superfamily DA442_01835 92629e8a7489c419c3b70e3485810bbb 284 Gene3D G3DSA:1.10.3680.10 45 191 2.3E-26 T 14-10-2018 IPR029024 TerB-like DA442_01835 92629e8a7489c419c3b70e3485810bbb 284 SUPERFAMILY SSF158682 5 230 6.28E-32 T 14-10-2018 IPR029024 TerB-like DA442_01835 92629e8a7489c419c3b70e3485810bbb 284 Pfam PF00226 DnaJ domain 218 278 7.0E-12 T 14-10-2018 IPR001623 DnaJ domain DA442_01835 92629e8a7489c419c3b70e3485810bbb 284 PRINTS PR00625 DnaJ domain signature 238 253 1.2E-8 T 14-10-2018 IPR001623 DnaJ domain DA442_01835 92629e8a7489c419c3b70e3485810bbb 284 PRINTS PR00625 DnaJ domain signature 262 282 1.2E-8 T 14-10-2018 IPR001623 DnaJ domain DA442_01835 92629e8a7489c419c3b70e3485810bbb 284 PRINTS PR00625 DnaJ domain signature 220 238 1.2E-8 T 14-10-2018 IPR001623 DnaJ domain DA442_01835 92629e8a7489c419c3b70e3485810bbb 284 Pfam PF05099 Tellurite resistance protein TerB 44 177 9.0E-18 T 14-10-2018 IPR007791 Co-chaperone DjlA, N-terminal DA442_01835 92629e8a7489c419c3b70e3485810bbb 284 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 283 39.509 T 14-10-2018 IPR023749 Co-chaperone DjlA GO:0051087 DA442_01835 92629e8a7489c419c3b70e3485810bbb 284 SMART SM00271 217 282 1.0E-17 T 14-10-2018 IPR001623 DnaJ domain DA442_01835 92629e8a7489c419c3b70e3485810bbb 284 Gene3D G3DSA:1.10.287.110 194 282 1.1E-16 T 14-10-2018 IPR036869 Chaperone J-domain superfamily DA442_22790 973a9056b79bb1540cc87ce3f5e8d6d8 246 SMART SM01007 22 210 1.1E-57 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal DA442_22790 973a9056b79bb1540cc87ce3f5e8d6d8 246 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 23 209 3.4E-44 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal DA442_22790 973a9056b79bb1540cc87ce3f5e8d6d8 246 SUPERFAMILY SSF53639 18 235 2.75E-65 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DA442_22790 973a9056b79bb1540cc87ce3f5e8d6d8 246 Gene3D G3DSA:3.40.225.10 17 243 4.3E-57 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DA442_14330 0a50d8d9bce24457c5267bf7f1381c71 522 Pfam PF04262 Glutamate-cysteine ligase 13 378 8.8E-168 T 14-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 DA442_14330 0a50d8d9bce24457c5267bf7f1381c71 522 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 522 221.682 T 14-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 DA442_14330 0a50d8d9bce24457c5267bf7f1381c71 522 SUPERFAMILY SSF55931 6 513 1.83E-199 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 DA442_14330 0a50d8d9bce24457c5267bf7f1381c71 522 Gene3D G3DSA:3.30.590.20 17 522 4.6E-191 T 14-10-2018 DA442_14330 0a50d8d9bce24457c5267bf7f1381c71 522 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 8 516 4.8E-208 T 14-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 DA442_21320 20fd7c263344390fdaa6ee461b4e29f7 337 Pfam PF00962 Adenosine/AMP deaminase 8 323 1.7E-73 T 14-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 DA442_21320 20fd7c263344390fdaa6ee461b4e29f7 337 SUPERFAMILY SSF51556 4 324 3.16E-90 T 14-10-2018 IPR032466 Metal-dependent hydrolase DA442_21320 20fd7c263344390fdaa6ee461b4e29f7 337 Gene3D G3DSA:3.20.20.140 1 336 4.2E-105 T 14-10-2018 DA442_21320 20fd7c263344390fdaa6ee461b4e29f7 337 Hamap MF_01962 Adenine deaminase. 4 316 86.737 T 14-10-2018 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 DA442_21320 20fd7c263344390fdaa6ee461b4e29f7 337 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 8 325 1.5E-114 T 14-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 DA442_08595 3e856060cad88bb133b262334f5cedf1 516 SUPERFAMILY SSF50494 15 265 6.21E-63 T 14-10-2018 IPR009003 Peptidase S1, PA clan DA442_08595 3e856060cad88bb133b262334f5cedf1 516 Gene3D G3DSA:2.40.10.10 34 254 1.2E-59 T 14-10-2018 DA442_08595 3e856060cad88bb133b262334f5cedf1 516 SMART SM00495 390 435 4.3E-11 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 DA442_08595 3e856060cad88bb133b262334f5cedf1 516 SMART SM00495 461 512 4.7E-4 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 DA442_08595 3e856060cad88bb133b262334f5cedf1 516 Gene3D G3DSA:2.10.10.20 389 433 2.0E-17 T 14-10-2018 DA442_08595 3e856060cad88bb133b262334f5cedf1 516 Gene3D G3DSA:2.60.40.10 275 383 8.7E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold DA442_08595 3e856060cad88bb133b262334f5cedf1 516 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 211 222 - T 14-10-2018 IPR033116 Serine proteases, trypsin family, serine active site DA442_08595 3e856060cad88bb133b262334f5cedf1 516 SUPERFAMILY SSF51055 387 436 1.09E-14 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 DA442_08595 3e856060cad88bb133b262334f5cedf1 516 Pfam PF00089 Trypsin 34 258 5.6E-48 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 DA442_08595 3e856060cad88bb133b262334f5cedf1 516 SMART SM00020 33 260 2.7E-61 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 DA442_08595 3e856060cad88bb133b262334f5cedf1 516 Gene3D G3DSA:2.40.10.10 46 255 1.2E-59 T 14-10-2018 DA442_08595 3e856060cad88bb133b262334f5cedf1 516 Pfam PF02839 Carbohydrate binding domain 407 432 9.4E-5 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 DA442_08595 3e856060cad88bb133b262334f5cedf1 516 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 118 132 2.0E-11 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 DA442_08595 3e856060cad88bb133b262334f5cedf1 516 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 62 77 2.0E-11 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 DA442_08595 3e856060cad88bb133b262334f5cedf1 516 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 210 222 2.0E-11 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 DA442_08595 3e856060cad88bb133b262334f5cedf1 516 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 72 77 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 DA442_04825 a6c87f0175307e6f9e632a87d46b61fb 204 SMART SM01144 1 193 3.3E-69 T 14-10-2018 IPR005636 DTW DA442_04825 a6c87f0175307e6f9e632a87d46b61fb 204 Pfam PF03942 DTW domain 3 188 2.6E-50 T 14-10-2018 IPR005636 DTW DA442_16095 651fad5bf6ba04f07a48b53eafbff7ba 144 SMART SM00450 40 138 1.6E-20 T 14-10-2018 IPR001763 Rhodanese-like domain DA442_16095 651fad5bf6ba04f07a48b53eafbff7ba 144 SUPERFAMILY SSF52821 15 143 2.1E-30 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily DA442_16095 651fad5bf6ba04f07a48b53eafbff7ba 144 Gene3D G3DSA:3.40.250.10 22 143 1.7E-24 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily DA442_16095 651fad5bf6ba04f07a48b53eafbff7ba 144 Pfam PF00581 Rhodanese-like domain 44 135 7.6E-17 T 14-10-2018 IPR001763 Rhodanese-like domain DA442_18835 6b642694216b29c3ac099a6e8e435bce 586 ProSitePatterns PS00211 ABC transporters family signature. 483 497 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_18835 6b642694216b29c3ac099a6e8e435bce 586 SUPERFAMILY SSF90123 14 326 6.41E-75 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DA442_18835 6b642694216b29c3ac099a6e8e435bce 586 SMART SM00382 371 557 1.8E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_18835 6b642694216b29c3ac099a6e8e435bce 586 Gene3D G3DSA:3.40.50.300 336 585 6.5E-95 T 14-10-2018 DA442_18835 6b642694216b29c3ac099a6e8e435bce 586 Pfam PF00664 ABC transporter transmembrane region 29 291 1.7E-50 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DA442_18835 6b642694216b29c3ac099a6e8e435bce 586 TIGRFAM TIGR02204 MsbA_rel: ABC transporter, permease/ATP-binding protein 7 582 1.0E-282 T 14-10-2018 IPR011918 ABC transporter, ATP-binding/permease protein DA442_18835 6b642694216b29c3ac099a6e8e435bce 586 Pfam PF00005 ABC transporter 363 511 3.0E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_18835 6b642694216b29c3ac099a6e8e435bce 586 SUPERFAMILY SSF52540 335 582 2.07E-92 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_18835 6b642694216b29c3ac099a6e8e435bce 586 Gene3D G3DSA:1.20.1560.10 9 333 2.6E-84 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DA442_11415 7cbbfab8d06e0a9435b25ac2e0108bd7 317 SMART SM00260 17 158 9.8E-26 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DA442_11415 7cbbfab8d06e0a9435b25ac2e0108bd7 317 PIRSF PIRSF002867 1 313 1.7E-106 T 14-10-2018 IPR024181 Chemotaxis response regulator CheV DA442_11415 7cbbfab8d06e0a9435b25ac2e0108bd7 317 Pfam PF01584 CheW-like domain 21 160 1.7E-33 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DA442_11415 7cbbfab8d06e0a9435b25ac2e0108bd7 317 Gene3D G3DSA:3.40.50.2300 183 312 1.0E-20 T 14-10-2018 DA442_11415 7cbbfab8d06e0a9435b25ac2e0108bd7 317 SMART SM00448 184 305 1.1E-12 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_11415 7cbbfab8d06e0a9435b25ac2e0108bd7 317 Gene3D G3DSA:2.30.30.40 24 152 2.9E-27 T 14-10-2018 DA442_11415 7cbbfab8d06e0a9435b25ac2e0108bd7 317 Pfam PF00072 Response regulator receiver domain 186 303 5.8E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_11415 7cbbfab8d06e0a9435b25ac2e0108bd7 317 SUPERFAMILY SSF50341 16 163 6.8E-33 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 DA442_11415 7cbbfab8d06e0a9435b25ac2e0108bd7 317 SUPERFAMILY SSF52172 183 311 3.7E-21 T 14-10-2018 IPR011006 CheY-like superfamily DA442_11415 7cbbfab8d06e0a9435b25ac2e0108bd7 317 Gene3D G3DSA:2.40.50.180 39 158 2.9E-27 T 14-10-2018 DA442_02965 c9907e48f47703d0022db44f48ff1fe3 501 SUPERFAMILY SSF53067 136 308 3.56E-46 T 14-10-2018 DA442_02965 c9907e48f47703d0022db44f48ff1fe3 501 Gene3D G3DSA:1.10.3210.10 310 501 8.3E-56 T 14-10-2018 DA442_02965 c9907e48f47703d0022db44f48ff1fe3 501 SUPERFAMILY SSF53067 12 131 1.18E-35 T 14-10-2018 DA442_02965 c9907e48f47703d0022db44f48ff1fe3 501 Gene3D G3DSA:3.30.420.150 116 294 1.7E-89 T 14-10-2018 DA442_02965 c9907e48f47703d0022db44f48ff1fe3 501 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 12 305 4.8E-101 T 14-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 DA442_02965 c9907e48f47703d0022db44f48ff1fe3 501 SUPERFAMILY SSF109604 312 500 1.76E-47 T 14-10-2018 DA442_02965 c9907e48f47703d0022db44f48ff1fe3 501 PIRSF PIRSF001267 2 501 3.2E-201 T 14-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 DA442_02965 c9907e48f47703d0022db44f48ff1fe3 501 Pfam PF02541 Ppx/GppA phosphatase family 25 307 4.9E-86 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 DA442_02965 c9907e48f47703d0022db44f48ff1fe3 501 Gene3D G3DSA:3.30.420.40 13 302 1.7E-89 T 14-10-2018 DA442_14210 48a8c21d81cbc44bc2746a325e5250b6 176 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 172 5.1E-74 T 14-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 DA442_14210 48a8c21d81cbc44bc2746a325e5250b6 176 SUPERFAMILY SSF53271 3 175 6.39E-56 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like DA442_14210 48a8c21d81cbc44bc2746a325e5250b6 176 Gene3D G3DSA:3.40.50.2020 1 176 6.3E-66 T 14-10-2018 DA442_14210 48a8c21d81cbc44bc2746a325e5250b6 176 Pfam PF00156 Phosphoribosyl transferase domain 12 159 2.7E-25 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DA442_11195 f27d4a4032f07e186f6e0c8e3fb838eb 324 Pfam PF08908 Domain of unknown function (DUF1852) 1 321 5.9E-184 T 14-10-2018 IPR015004 Protein of unknown function DUF1852 DA442_11195 f27d4a4032f07e186f6e0c8e3fb838eb 324 PIRSF PIRSF034367 1 324 3.9E-196 T 14-10-2018 IPR015004 Protein of unknown function DUF1852 DA442_15610 5b60bce77b08dd2737d7c83e4e5fee35 580 Pfam PF03958 Bacterial type II/III secretion system short domain 254 319 1.2E-12 T 14-10-2018 IPR005644 NolW-like DA442_15610 5b60bce77b08dd2737d7c83e4e5fee35 580 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 155 578 2.5E-164 T 14-10-2018 IPR013355 Type IV pilus secretin PilQ DA442_15610 5b60bce77b08dd2737d7c83e4e5fee35 580 Gene3D G3DSA:3.30.1370.120 252 315 1.5E-11 T 14-10-2018 IPR038591 NolW-like superfamily DA442_15610 5b60bce77b08dd2737d7c83e4e5fee35 580 SMART SM00965 180 228 7.6E-9 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 DA442_15610 5b60bce77b08dd2737d7c83e4e5fee35 580 Pfam PF00263 Bacterial type II and III secretion system protein 420 578 3.2E-46 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 DA442_15610 5b60bce77b08dd2737d7c83e4e5fee35 580 Gene3D G3DSA:3.55.50.30 139 251 3.0E-36 T 14-10-2018 DA442_15610 5b60bce77b08dd2737d7c83e4e5fee35 580 Gene3D G3DSA:2.60.40.3470 24 138 1.9E-14 T 14-10-2018 DA442_15610 5b60bce77b08dd2737d7c83e4e5fee35 580 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 524 557 - T 14-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 DA442_15610 5b60bce77b08dd2737d7c83e4e5fee35 580 PRINTS PR00811 Bacterial general secretion pathway protein D signature 543 561 7.7E-20 T 14-10-2018 IPR001775 GspD/PilQ family DA442_15610 5b60bce77b08dd2737d7c83e4e5fee35 580 PRINTS PR00811 Bacterial general secretion pathway protein D signature 451 461 7.7E-20 T 14-10-2018 IPR001775 GspD/PilQ family DA442_15610 5b60bce77b08dd2737d7c83e4e5fee35 580 PRINTS PR00811 Bacterial general secretion pathway protein D signature 319 329 7.7E-20 T 14-10-2018 IPR001775 GspD/PilQ family DA442_15610 5b60bce77b08dd2737d7c83e4e5fee35 580 PRINTS PR00811 Bacterial general secretion pathway protein D signature 566 580 7.7E-20 T 14-10-2018 IPR001775 GspD/PilQ family DA442_15610 5b60bce77b08dd2737d7c83e4e5fee35 580 PRINTS PR00811 Bacterial general secretion pathway protein D signature 416 440 7.7E-20 T 14-10-2018 IPR001775 GspD/PilQ family DA442_04375 eda35a8e90640c378f8e268d368584f6 167 SUPERFAMILY SSF54637 10 156 2.46E-23 T 14-10-2018 IPR029069 HotDog domain superfamily DA442_04375 eda35a8e90640c378f8e268d368584f6 167 Gene3D G3DSA:3.10.129.10 17 157 2.6E-27 T 14-10-2018 DA442_04375 eda35a8e90640c378f8e268d368584f6 167 Pfam PF14539 Domain of unknown function (DUF4442) 15 151 1.6E-24 T 14-10-2018 IPR027961 Protein of unknown function DUF4442 DA442_18455 b98d71cd83badc7493844d4768d58df9 327 Pfam PF12833 Helix-turn-helix domain 242 321 5.4E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_18455 b98d71cd83badc7493844d4768d58df9 327 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 273 315 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DA442_18455 b98d71cd83badc7493844d4768d58df9 327 Pfam PF01965 DJ-1/PfpI family 25 182 7.4E-10 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 DA442_18455 b98d71cd83badc7493844d4768d58df9 327 SUPERFAMILY SSF52317 23 190 3.83E-24 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DA442_18455 b98d71cd83badc7493844d4768d58df9 327 SMART SM00342 236 319 5.9E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_18455 b98d71cd83badc7493844d4768d58df9 327 Gene3D G3DSA:3.40.50.880 2 209 2.4E-43 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DA442_18455 b98d71cd83badc7493844d4768d58df9 327 SUPERFAMILY SSF46689 273 322 7.17E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_18455 b98d71cd83badc7493844d4768d58df9 327 Gene3D G3DSA:1.10.10.60 221 326 7.7E-23 T 14-10-2018 DA442_19885 4970c5ab8699ecedd8362837244f776f 484 Pfam PF05762 VWA domain containing CoxE-like protein 319 447 2.4E-11 T 14-10-2018 IPR008912 Uncharacterised protein family CoxE-like DA442_19885 4970c5ab8699ecedd8362837244f776f 484 SUPERFAMILY SSF53300 318 475 1.32E-24 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily DA442_19885 4970c5ab8699ecedd8362837244f776f 484 Gene3D G3DSA:3.40.50.410 322 468 1.0E-7 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily DA442_01545 320fb20e346661184450aecd575cb715 206 Pfam PF01479 S4 domain 97 143 2.5E-18 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01545 320fb20e346661184450aecd575cb715 206 SMART SM01390 3 95 6.8E-50 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 DA442_01545 320fb20e346661184450aecd575cb715 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 1.6E-32 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 DA442_01545 320fb20e346661184450aecd575cb715 206 SUPERFAMILY SSF55174 3 206 1.01E-72 T 14-10-2018 DA442_01545 320fb20e346661184450aecd575cb715 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 14-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01545 320fb20e346661184450aecd575cb715 206 Gene3D G3DSA:3.10.290.10 103 191 2.2E-36 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DA442_01545 320fb20e346661184450aecd575cb715 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.363 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 DA442_01545 320fb20e346661184450aecd575cb715 206 Gene3D G3DSA:1.10.1050.10 1 102 5.8E-45 T 14-10-2018 DA442_01545 320fb20e346661184450aecd575cb715 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 3.4E-85 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 DA442_01545 320fb20e346661184450aecd575cb715 206 SMART SM00363 96 160 5.9E-20 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_03435 d2de917bb5b4dd172425efd484822c4a 356 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 50 317 6.3E-73 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 DA442_03435 d2de917bb5b4dd172425efd484822c4a 356 PIRSF PIRSF039012 3 325 2.4E-92 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 DA442_03435 d2de917bb5b4dd172425efd484822c4a 356 Gene3D G3DSA:3.40.630.10 15 320 1.7E-92 T 14-10-2018 DA442_03435 d2de917bb5b4dd172425efd484822c4a 356 SUPERFAMILY SSF53187 22 318 2.25E-76 T 14-10-2018 DA442_04855 27a69ba1603d425a361c16619a9c1259 264 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 19 260 1.5E-84 T 14-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 DA442_04855 27a69ba1603d425a361c16619a9c1259 264 Pfam PF12697 Alpha/beta hydrolase family 21 252 1.8E-17 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DA442_04855 27a69ba1603d425a361c16619a9c1259 264 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 13 260 33.86 T 14-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 DA442_04855 27a69ba1603d425a361c16619a9c1259 264 Gene3D G3DSA:3.40.50.1820 10 261 1.1E-64 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_04855 27a69ba1603d425a361c16619a9c1259 264 SUPERFAMILY SSF53474 16 261 1.33E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_20090 afb2a740c0fbf2bc8f46c4d67d101823 406 SMART SM00448 2 116 2.3E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_20090 afb2a740c0fbf2bc8f46c4d67d101823 406 Gene3D G3DSA:3.60.40.10 131 393 4.3E-49 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DA442_20090 afb2a740c0fbf2bc8f46c4d67d101823 406 SUPERFAMILY SSF52172 2 162 1.71E-31 T 14-10-2018 IPR011006 CheY-like superfamily DA442_20090 afb2a740c0fbf2bc8f46c4d67d101823 406 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 191 393 2.6E-41 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DA442_20090 afb2a740c0fbf2bc8f46c4d67d101823 406 Pfam PF00072 Response regulator receiver domain 4 117 8.5E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_20090 afb2a740c0fbf2bc8f46c4d67d101823 406 SMART SM00331 149 393 7.0E-9 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DA442_20090 afb2a740c0fbf2bc8f46c4d67d101823 406 Gene3D G3DSA:3.40.50.2300 3 127 5.6E-28 T 14-10-2018 DA442_19975 f99685c6184c9c22b4d809a47993339c 611 Gene3D G3DSA:3.55.50.10 109 199 3.0E-68 T 14-10-2018 DA442_19975 f99685c6184c9c22b4d809a47993339c 611 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 11 530 1.4E-167 T 14-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset DA442_19975 f99685c6184c9c22b4d809a47993339c 611 SUPERFAMILY SSF69279 12 195 1.59E-43 T 14-10-2018 DA442_19975 f99685c6184c9c22b4d809a47993339c 611 SUPERFAMILY SSF69349 450 602 1.02E-35 T 14-10-2018 DA442_19975 f99685c6184c9c22b4d809a47993339c 611 Pfam PF05954 Phage late control gene D protein (GPD) 30 335 5.0E-74 T 14-10-2018 DA442_19975 f99685c6184c9c22b4d809a47993339c 611 Gene3D G3DSA:2.30.110.50 15 333 3.0E-68 T 14-10-2018 DA442_19975 f99685c6184c9c22b4d809a47993339c 611 SUPERFAMILY SSF69279 212 372 6.63E-9 T 14-10-2018 DA442_19975 f99685c6184c9c22b4d809a47993339c 611 Gene3D G3DSA:3.30.1920.30 230 293 3.0E-68 T 14-10-2018 DA442_19975 f99685c6184c9c22b4d809a47993339c 611 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 24 512 5.6E-106 T 14-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein DA442_19975 f99685c6184c9c22b4d809a47993339c 611 Gene3D G3DSA:2.40.50.230 363 465 8.3E-43 T 14-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily DA442_19975 f99685c6184c9c22b4d809a47993339c 611 SUPERFAMILY SSF69255 372 460 6.02E-33 T 14-10-2018 DA442_19305 9b6e9ec39ab0c770a0088e33ddd69271 295 SUPERFAMILY SSF53850 109 289 3.8E-18 T 14-10-2018 DA442_19305 9b6e9ec39ab0c770a0088e33ddd69271 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 3.5E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_19305 9b6e9ec39ab0c770a0088e33ddd69271 295 Pfam PF03466 LysR substrate binding domain 122 291 8.9E-14 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_19305 9b6e9ec39ab0c770a0088e33ddd69271 295 Gene3D G3DSA:3.40.190.290 96 282 3.0E-10 T 14-10-2018 DA442_19305 9b6e9ec39ab0c770a0088e33ddd69271 295 Gene3D G3DSA:1.10.10.10 5 90 5.6E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_19305 9b6e9ec39ab0c770a0088e33ddd69271 295 SUPERFAMILY SSF46785 5 84 7.39E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_11290 4643f196edcc11644d4c6ea8c17b0029 255 Gene3D G3DSA:3.30.70.20 40 247 4.7E-67 T 14-10-2018 DA442_11290 4643f196edcc11644d4c6ea8c17b0029 255 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 141 152 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DA442_11290 4643f196edcc11644d4c6ea8c17b0029 255 Pfam PF13247 4Fe-4S dicluster domain 102 196 1.1E-29 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DA442_11290 4643f196edcc11644d4c6ea8c17b0029 255 SUPERFAMILY SSF54862 47 231 7.64E-66 T 14-10-2018 DA442_23075 28ad083949a74e51089546e7b2a13ecf 251 SUPERFAMILY SSF55785 24 135 4.36E-14 T 14-10-2018 IPR035965 PAS domain superfamily DA442_23075 28ad083949a74e51089546e7b2a13ecf 251 SMART SM00421 168 225 2.4E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_23075 28ad083949a74e51089546e7b2a13ecf 251 Pfam PF00196 Bacterial regulatory proteins, luxR family 170 225 2.2E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_23075 28ad083949a74e51089546e7b2a13ecf 251 Gene3D G3DSA:1.10.10.10 162 229 1.3E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_23075 28ad083949a74e51089546e7b2a13ecf 251 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 201 3.9E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_23075 28ad083949a74e51089546e7b2a13ecf 251 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 201 213 3.9E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_23075 28ad083949a74e51089546e7b2a13ecf 251 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 185 3.9E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_23075 28ad083949a74e51089546e7b2a13ecf 251 SUPERFAMILY SSF46894 159 230 1.17E-13 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DA442_23075 28ad083949a74e51089546e7b2a13ecf 251 Gene3D G3DSA:3.30.450.20 21 140 1.5E-16 T 14-10-2018 DA442_23075 28ad083949a74e51089546e7b2a13ecf 251 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 27 135 1.2E-5 T 14-10-2018 IPR000014 PAS domain DA442_23075 28ad083949a74e51089546e7b2a13ecf 251 Pfam PF08448 PAS fold 25 136 1.1E-26 T 14-10-2018 IPR013656 PAS fold-4 DA442_20650 65dbefc27c889c79e532187e526688b4 250 Gene3D G3DSA:3.40.50.620 1 247 3.2E-85 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DA442_20650 65dbefc27c889c79e532187e526688b4 250 SUPERFAMILY SSF52402 2 242 3.42E-82 T 14-10-2018 DA442_20650 65dbefc27c889c79e532187e526688b4 250 PIRSF PIRSF000090 1 249 9.8E-82 T 14-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 DA442_20650 65dbefc27c889c79e532187e526688b4 250 SMART SM00893 23 211 9.3E-67 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 DA442_20650 65dbefc27c889c79e532187e526688b4 250 Pfam PF01012 Electron transfer flavoprotein domain 26 205 2.8E-46 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 DA442_05420 b64c9da87d887cfb722038c13faa78a1 322 Pfam PF14397 Sugar-transfer associated ATP-grasp 22 294 7.1E-115 T 14-10-2018 IPR039523 Alpha-L-glutamate ligase-related protein, ATP-grasp domain KEGG: 00270+6.3.2.2+6.3.2.3|KEGG: 00480+6.3.2.2+6.3.2.3|MetaCyc: PWY-6840|MetaCyc: PWY-7255 DA442_05420 b64c9da87d887cfb722038c13faa78a1 322 SUPERFAMILY SSF56059 36 277 7.69E-20 T 14-10-2018 DA442_05420 b64c9da87d887cfb722038c13faa78a1 322 TIGRFAM TIGR02291 rimK_rel_E_lig: alpha-L-glutamate ligase homolog 5 320 3.3E-180 T 14-10-2018 IPR011758 Alpha-L-glutamate ligase-related protein DA442_15925 82c16033f2d64af622e62cc178e86825 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 183 193 2.4E-8 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DA442_15925 82c16033f2d64af622e62cc178e86825 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 263 282 2.4E-8 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DA442_15925 82c16033f2d64af622e62cc178e86825 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 204 211 2.4E-8 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DA442_15925 82c16033f2d64af622e62cc178e86825 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 356 364 2.4E-8 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DA442_15925 82c16033f2d64af622e62cc178e86825 394 SUPERFAMILY SSF46458 1 142 1.33E-36 T 14-10-2018 IPR009050 Globin-like superfamily DA442_15925 82c16033f2d64af622e62cc178e86825 394 Gene3D G3DSA:1.10.490.10 1 142 3.5E-50 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 DA442_15925 82c16033f2d64af622e62cc178e86825 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 356 364 1.9E-9 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DA442_15925 82c16033f2d64af622e62cc178e86825 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 1.9E-9 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DA442_15925 82c16033f2d64af622e62cc178e86825 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 1.9E-9 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DA442_15925 82c16033f2d64af622e62cc178e86825 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 183 195 1.9E-9 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DA442_15925 82c16033f2d64af622e62cc178e86825 394 Pfam PF00175 Oxidoreductase NAD-binding domain 264 370 3.8E-19 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 DA442_15925 82c16033f2d64af622e62cc178e86825 394 SUPERFAMILY SSF52343 255 393 1.14E-37 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DA442_15925 82c16033f2d64af622e62cc178e86825 394 Hamap MF_01252 Flavohemoprotein [hmp]. 1 394 55.739 T 14-10-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 DA442_15925 82c16033f2d64af622e62cc178e86825 394 SUPERFAMILY SSF63380 148 253 4.89E-29 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DA442_15925 82c16033f2d64af622e62cc178e86825 394 Pfam PF00970 Oxidoreductase FAD-binding domain 155 252 1.8E-14 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 DA442_15925 82c16033f2d64af622e62cc178e86825 394 Gene3D G3DSA:2.40.30.10 149 254 4.1E-33 T 14-10-2018 DA442_15925 82c16033f2d64af622e62cc178e86825 394 Gene3D G3DSA:3.40.50.80 255 394 6.5E-34 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DA442_15925 82c16033f2d64af622e62cc178e86825 394 Pfam PF00042 Globin 7 102 1.5E-14 T 14-10-2018 IPR000971 Globin GO:0020037 DA442_15665 9d1dcc816438d816f7a4e717f23bb353 404 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 121 132 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DA442_15665 9d1dcc816438d816f7a4e717f23bb353 404 TIGRFAM TIGR00032 argG: argininosuccinate synthase 8 395 4.4E-135 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DA442_15665 9d1dcc816438d816f7a4e717f23bb353 404 Pfam PF00764 Arginosuccinate synthase 10 396 2.8E-145 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DA442_15665 9d1dcc816438d816f7a4e717f23bb353 404 Gene3D G3DSA:3.90.1260.10 68 356 6.6E-145 T 14-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DA442_15665 9d1dcc816438d816f7a4e717f23bb353 404 SUPERFAMILY SSF69864 177 402 5.49E-88 T 14-10-2018 DA442_15665 9d1dcc816438d816f7a4e717f23bb353 404 SUPERFAMILY SSF52402 7 170 3.75E-47 T 14-10-2018 DA442_15665 9d1dcc816438d816f7a4e717f23bb353 404 Hamap MF_00005 Argininosuccinate synthase [argG]. 6 402 51.557 T 14-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DA442_15665 9d1dcc816438d816f7a4e717f23bb353 404 Gene3D G3DSA:3.40.50.620 9 177 6.6E-145 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DA442_15665 9d1dcc816438d816f7a4e717f23bb353 404 Gene3D G3DSA:1.20.5.470 368 403 5.0E-8 T 14-10-2018 DA442_15665 9d1dcc816438d816f7a4e717f23bb353 404 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 12 20 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DA442_23165 23a0a05929e0e7778b1cbadb9a9476c8 303 Gene3D G3DSA:3.40.190.290 92 298 4.0E-46 T 14-10-2018 DA442_23165 23a0a05929e0e7778b1cbadb9a9476c8 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 64 8.4E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_23165 23a0a05929e0e7778b1cbadb9a9476c8 303 SUPERFAMILY SSF46785 10 112 2.8E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_23165 23a0a05929e0e7778b1cbadb9a9476c8 303 Gene3D G3DSA:1.10.10.10 6 90 2.1E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_23165 23a0a05929e0e7778b1cbadb9a9476c8 303 SUPERFAMILY SSF53850 91 299 3.72E-35 T 14-10-2018 DA442_23165 23a0a05929e0e7778b1cbadb9a9476c8 303 Pfam PF03466 LysR substrate binding domain 91 297 3.0E-33 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_09440 8d04ac28038f22f6f000b867cb953bb9 135 Gene3D G3DSA:2.30.30.40 72 135 4.0E-13 T 14-10-2018 DA442_09440 8d04ac28038f22f6f000b867cb953bb9 135 SMART SM00287 73 135 1.1E-10 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type DA442_09440 8d04ac28038f22f6f000b867cb953bb9 135 Pfam PF08239 Bacterial SH3 domain 83 132 1.7E-6 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type DA442_20715 a95f9f5cc3bc67582b2fecca099da563 217 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 144 154 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 DA442_20715 a95f9f5cc3bc67582b2fecca099da563 217 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 96 112 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 DA442_20715 a95f9f5cc3bc67582b2fecca099da563 217 SUPERFAMILY SSF55620 10 216 1.56E-74 T 14-10-2018 DA442_20715 a95f9f5cc3bc67582b2fecca099da563 217 Gene3D G3DSA:1.10.286.10 1 84 2.5E-37 T 14-10-2018 DA442_20715 a95f9f5cc3bc67582b2fecca099da563 217 Gene3D G3DSA:3.30.1130.10 85 217 2.6E-52 T 14-10-2018 DA442_20715 a95f9f5cc3bc67582b2fecca099da563 217 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 34 217 33.921 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 DA442_20715 a95f9f5cc3bc67582b2fecca099da563 217 Pfam PF01227 GTP cyclohydrolase I 38 215 3.7E-64 T 14-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 DA442_20715 a95f9f5cc3bc67582b2fecca099da563 217 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 38 216 7.0E-80 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 DA442_18640 d015b9ff4124b4b7e6d43f10e5d9693a 183 SMART SM00014 57 157 1.2E-5 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DA442_18640 d015b9ff4124b4b7e6d43f10e5d9693a 183 Gene3D G3DSA:1.20.144.10 86 168 7.8E-17 T 14-10-2018 DA442_18640 d015b9ff4124b4b7e6d43f10e5d9693a 183 Pfam PF01569 PAP2 superfamily 83 162 5.4E-14 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DA442_18640 d015b9ff4124b4b7e6d43f10e5d9693a 183 SUPERFAMILY SSF48317 30 170 4.45E-29 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily DA442_17425 d924c43ca9334ed390b53b8450a83770 515 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 330 420 1.3E-25 T 14-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 DA442_17425 d924c43ca9334ed390b53b8450a83770 515 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 428 514 4.0E-27 T 14-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 DA442_17425 d924c43ca9334ed390b53b8450a83770 515 Gene3D G3DSA:3.40.50.1100 26 328 4.1E-135 T 14-10-2018 DA442_17425 d924c43ca9334ed390b53b8450a83770 515 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 54 67 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 DA442_17425 d924c43ca9334ed390b53b8450a83770 515 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 30 317 1.4E-85 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DA442_17425 d924c43ca9334ed390b53b8450a83770 515 SUPERFAMILY SSF55021 338 424 1.3E-27 T 14-10-2018 DA442_17425 d924c43ca9334ed390b53b8450a83770 515 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 16 514 2.2E-252 T 14-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 DA442_17425 d924c43ca9334ed390b53b8450a83770 515 SUPERFAMILY SSF53686 16 366 1.27E-107 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DA442_17425 d924c43ca9334ed390b53b8450a83770 515 SUPERFAMILY SSF55021 421 514 5.95E-27 T 14-10-2018 DA442_17425 d924c43ca9334ed390b53b8450a83770 515 Gene3D G3DSA:3.40.1020.10 339 515 3.8E-72 T 14-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 DA442_17425 d924c43ca9334ed390b53b8450a83770 515 Gene3D G3DSA:3.40.50.1100 62 158 4.1E-135 T 14-10-2018 DA442_12975 c29c9a5ee453659f098bee235384177e 102 Gene3D G3DSA:3.30.300.90 1 89 3.0E-34 T 14-10-2018 DA442_12975 c29c9a5ee453659f098bee235384177e 102 PIRSF PIRSF003113 1 99 9.3E-37 T 14-10-2018 IPR002634 BolA protein DA442_12975 c29c9a5ee453659f098bee235384177e 102 Pfam PF01722 BolA-like protein 10 83 1.5E-29 T 14-10-2018 IPR002634 BolA protein DA442_12975 c29c9a5ee453659f098bee235384177e 102 SUPERFAMILY SSF82657 1 89 1.07E-31 T 14-10-2018 IPR036065 BolA-like superfamily DA442_21475 3830b54498e3e047e0fdafd05973729e 300 Gene3D G3DSA:3.40.50.300 28 299 3.8E-5 T 14-10-2018 DA442_21475 3830b54498e3e047e0fdafd05973729e 300 SUPERFAMILY SSF52540 35 251 5.31E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_21475 3830b54498e3e047e0fdafd05973729e 300 Pfam PF10364 Putative capsular polysaccharide synthesis protein 150 285 3.3E-58 T 14-10-2018 IPR018831 Uncharacterised protein family NKWYS DA442_09185 14128ca99cbf43a0e153e65e9c25d152 119 Gene3D G3DSA:3.90.1150.30 3 119 9.2E-42 T 14-10-2018 IPR038056 YjbR-like superfamily DA442_09185 14128ca99cbf43a0e153e65e9c25d152 119 SUPERFAMILY SSF142906 3 117 1.57E-38 T 14-10-2018 IPR038056 YjbR-like superfamily DA442_09185 14128ca99cbf43a0e153e65e9c25d152 119 Pfam PF04237 YjbR 17 104 2.0E-25 T 14-10-2018 IPR007351 Uncharacterised protein YjbR DA442_25150 b050e193470dd747598da895da8ccaaf 352 Gene3D G3DSA:3.40.50.720 154 289 1.9E-74 T 14-10-2018 DA442_25150 b050e193470dd747598da895da8ccaaf 352 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 104 3.7E-11 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DA442_25150 b050e193470dd747598da895da8ccaaf 352 SUPERFAMILY SSF51735 143 306 1.42E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_25150 b050e193470dd747598da895da8ccaaf 352 Gene3D G3DSA:3.90.180.10 13 329 1.9E-74 T 14-10-2018 DA442_25150 b050e193470dd747598da895da8ccaaf 352 SMART SM00829 12 341 0.006 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DA442_25150 b050e193470dd747598da895da8ccaaf 352 Pfam PF00107 Zinc-binding dehydrogenase 177 304 1.6E-16 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DA442_25150 b050e193470dd747598da895da8ccaaf 352 SUPERFAMILY SSF50129 10 176 2.59E-33 T 14-10-2018 IPR011032 GroES-like superfamily DA442_05460 2c0382581621e507e023296c10ab5b42 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 47.719 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DA442_05460 2c0382581621e507e023296c10ab5b42 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 155 3.2E-75 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DA442_05460 2c0382581621e507e023296c10ab5b42 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 1.1E-62 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DA442_05460 2c0382581621e507e023296c10ab5b42 173 Gene3D G3DSA:3.30.420.10 2 159 1.7E-52 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DA442_05460 2c0382581621e507e023296c10ab5b42 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 3.1E-42 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DA442_05460 2c0382581621e507e023296c10ab5b42 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 3.1E-42 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DA442_05460 2c0382581621e507e023296c10ab5b42 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 3.1E-42 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DA442_05460 2c0382581621e507e023296c10ab5b42 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 3.1E-42 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DA442_05460 2c0382581621e507e023296c10ab5b42 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 3.1E-42 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 DA442_05460 2c0382581621e507e023296c10ab5b42 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 14-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 DA442_05460 2c0382581621e507e023296c10ab5b42 173 SUPERFAMILY SSF53098 3 156 5.31E-55 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DA442_05855 7dc78264a33e8ec41b4ef1faedf020e1 346 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 206 215 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 DA442_05855 7dc78264a33e8ec41b4ef1faedf020e1 346 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 6 343 1.6E-117 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 DA442_05855 7dc78264a33e8ec41b4ef1faedf020e1 346 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 345 52.914 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 DA442_05855 7dc78264a33e8ec41b4ef1faedf020e1 346 Gene3D G3DSA:3.40.640.10 49 253 2.8E-121 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_05855 7dc78264a33e8ec41b4ef1faedf020e1 346 SUPERFAMILY SSF53383 10 343 2.61E-74 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_05855 7dc78264a33e8ec41b4ef1faedf020e1 346 Gene3D G3DSA:3.90.1150.10 4 336 2.8E-121 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DA442_05855 7dc78264a33e8ec41b4ef1faedf020e1 346 Pfam PF00155 Aminotransferase class I and II 42 337 1.2E-55 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DA442_14670 1f4ef4f22f70289176aa69ddb4d0f6b2 298 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 298 53.376 T 14-10-2018 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria DA442_14670 1f4ef4f22f70289176aa69ddb4d0f6b2 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 4.7E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_14670 1f4ef4f22f70289176aa69ddb4d0f6b2 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 4.7E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_14670 1f4ef4f22f70289176aa69ddb4d0f6b2 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 4.7E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_14670 1f4ef4f22f70289176aa69ddb4d0f6b2 298 SUPERFAMILY SSF53850 94 295 3.26E-21 T 14-10-2018 DA442_14670 1f4ef4f22f70289176aa69ddb4d0f6b2 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 63 3.2E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_14670 1f4ef4f22f70289176aa69ddb4d0f6b2 298 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 4 296 4.7E-105 T 14-10-2018 IPR017685 HTH-type transcriptional regulator ArgP DA442_14670 1f4ef4f22f70289176aa69ddb4d0f6b2 298 Gene3D G3DSA:3.40.190.290 89 296 2.3E-63 T 14-10-2018 DA442_14670 1f4ef4f22f70289176aa69ddb4d0f6b2 298 Pfam PF03466 LysR substrate binding domain 95 276 5.2E-14 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_14670 1f4ef4f22f70289176aa69ddb4d0f6b2 298 SUPERFAMILY SSF46785 4 112 1.56E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_14670 1f4ef4f22f70289176aa69ddb4d0f6b2 298 Gene3D G3DSA:1.10.10.10 2 85 5.4E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_19550 02d5399846836a435d60d513185f4bf4 461 Pfam PF01554 MatE 249 411 3.0E-16 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DA442_19550 02d5399846836a435d60d513185f4bf4 461 Pfam PF01554 MatE 22 180 4.0E-35 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DA442_19550 02d5399846836a435d60d513185f4bf4 461 PIRSF PIRSF006603 2 461 1.1E-70 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DA442_19550 02d5399846836a435d60d513185f4bf4 461 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 421 2.8E-53 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DA442_15315 4ddbacbe9b9278b0381cd0570b99d3f4 407 Gene3D G3DSA:1.20.81.30 62 176 6.8E-31 T 14-10-2018 DA442_15315 4ddbacbe9b9278b0381cd0570b99d3f4 407 Pfam PF00482 Type II secretion system (T2SS), protein F 71 194 4.0E-30 T 14-10-2018 IPR018076 Type II secretion system F domain DA442_15315 4ddbacbe9b9278b0381cd0570b99d3f4 407 Pfam PF00482 Type II secretion system (T2SS), protein F 274 396 9.7E-27 T 14-10-2018 IPR018076 Type II secretion system F domain DA442_15315 4ddbacbe9b9278b0381cd0570b99d3f4 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 3.9E-9 T 14-10-2018 IPR003004 GspF/PilC family DA442_15315 4ddbacbe9b9278b0381cd0570b99d3f4 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 3.9E-9 T 14-10-2018 IPR003004 GspF/PilC family DA442_15315 4ddbacbe9b9278b0381cd0570b99d3f4 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 3.9E-9 T 14-10-2018 IPR003004 GspF/PilC family DA442_15315 4ddbacbe9b9278b0381cd0570b99d3f4 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 3.9E-9 T 14-10-2018 IPR003004 GspF/PilC family DA442_15315 4ddbacbe9b9278b0381cd0570b99d3f4 407 Gene3D G3DSA:1.20.81.30 257 370 1.4E-28 T 14-10-2018 DA442_07185 c449ed21a6eccfe80742d44bf1f62fdb 552 SUPERFAMILY SSF49373 27 111 2.28E-6 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments DA442_07185 c449ed21a6eccfe80742d44bf1f62fdb 552 Gene3D G3DSA:2.60.40.1080 27 120 1.3E-11 T 14-10-2018 DA442_11840 1a97518ba91496216dddf01cb13dea86 111 Pfam PF00462 Glutaredoxin 16 80 4.4E-17 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 DA442_11840 1a97518ba91496216dddf01cb13dea86 111 SUPERFAMILY SSF52833 1 104 3.67E-34 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_11840 1a97518ba91496216dddf01cb13dea86 111 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 6.7E-46 T 14-10-2018 IPR004480 Monothiol glutaredoxin-related DA442_11840 1a97518ba91496216dddf01cb13dea86 111 PIRSF PIRSF005894 1 107 1.1E-51 T 14-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 DA442_11840 1a97518ba91496216dddf01cb13dea86 111 Gene3D G3DSA:3.40.30.10 2 106 9.2E-31 T 14-10-2018 DA442_17800 c484c853f5f2cd82e1011ac8780efdd7 102 Pfam PF06945 Protein of unknown function (DUF1289) 3 45 1.7E-14 T 14-10-2018 IPR010710 Protein of unknown function DUF1289 DA442_17800 c484c853f5f2cd82e1011ac8780efdd7 102 Pfam PF14375 Cysteine-rich CWC 53 97 3.0E-6 T 14-10-2018 IPR032720 Cysteine-rich CWC DA442_10845 7843551475521e684e4214c14064082e 323 TIGRFAM TIGR03148 cyt_nit_nrfD: cytochrome c nitrite reductase, NrfD subunit 6 323 2.9E-147 T 14-10-2018 IPR017566 NrfD DA442_10845 7843551475521e684e4214c14064082e 323 Pfam PF03916 Polysulphide reductase, NrfD 6 322 1.0E-77 T 14-10-2018 IPR005614 NrfD family DA442_10845 7843551475521e684e4214c14064082e 323 Gene3D G3DSA:1.20.1630.10 7 106 1.2E-9 T 14-10-2018 DA442_10845 7843551475521e684e4214c14064082e 323 Gene3D G3DSA:1.20.1630.10 107 211 1.3E-5 T 14-10-2018 DA442_14775 404700682873d0032171c14c49a7f42a 237 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 230 2.3E-91 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 DA442_14775 404700682873d0032171c14c49a7f42a 237 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 80 94 - T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 DA442_14775 404700682873d0032171c14c49a7f42a 237 SUPERFAMILY SSF51419 1 228 5.5E-83 T 14-10-2018 IPR029066 PLP-binding barrel DA442_14775 404700682873d0032171c14c49a7f42a 237 Gene3D G3DSA:3.20.20.10 1 236 3.5E-89 T 14-10-2018 IPR029066 PLP-binding barrel DA442_14775 404700682873d0032171c14c49a7f42a 237 PIRSF PIRSF004848 1 236 9.6E-80 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 DA442_14775 404700682873d0032171c14c49a7f42a 237 Pfam PF01168 Alanine racemase, N-terminal domain 9 230 1.2E-37 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DA442_14775 404700682873d0032171c14c49a7f42a 237 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 229 35.067 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 DA442_17605 df2a82d39203dcb8a58b07bf0a10912c 540 Pfam PF02096 60Kd inner membrane protein 351 530 1.5E-63 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DA442_17605 df2a82d39203dcb8a58b07bf0a10912c 540 PRINTS PR01900 YidC translocation/secretion protein signature 465 480 1.8E-26 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DA442_17605 df2a82d39203dcb8a58b07bf0a10912c 540 PRINTS PR01900 YidC translocation/secretion protein signature 336 352 1.8E-26 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DA442_17605 df2a82d39203dcb8a58b07bf0a10912c 540 PRINTS PR01900 YidC translocation/secretion protein signature 485 509 1.8E-26 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DA442_17605 df2a82d39203dcb8a58b07bf0a10912c 540 Gene3D G3DSA:2.70.98.90 61 330 6.2E-90 T 14-10-2018 IPR038221 YidC, periplasmic domain superfamily DA442_17605 df2a82d39203dcb8a58b07bf0a10912c 540 Pfam PF14849 YidC periplasmic domain 65 339 5.2E-84 T 14-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain DA442_17605 df2a82d39203dcb8a58b07bf0a10912c 540 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 350 529 1.0E-73 T 14-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_17605 df2a82d39203dcb8a58b07bf0a10912c 540 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 349 1.6E-111 T 14-10-2018 IPR028053 Membrane insertase YidC, N-terminal DA442_17605 df2a82d39203dcb8a58b07bf0a10912c 540 PRINTS PR00701 60kDa inner membrane protein signature 321 341 1.6E-99 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DA442_17605 df2a82d39203dcb8a58b07bf0a10912c 540 PRINTS PR00701 60kDa inner membrane protein signature 412 435 1.6E-99 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DA442_17605 df2a82d39203dcb8a58b07bf0a10912c 540 PRINTS PR00701 60kDa inner membrane protein signature 2 23 1.6E-99 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DA442_17605 df2a82d39203dcb8a58b07bf0a10912c 540 PRINTS PR00701 60kDa inner membrane protein signature 214 232 1.6E-99 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DA442_17605 df2a82d39203dcb8a58b07bf0a10912c 540 PRINTS PR00701 60kDa inner membrane protein signature 496 519 1.6E-99 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DA442_17605 df2a82d39203dcb8a58b07bf0a10912c 540 PRINTS PR00701 60kDa inner membrane protein signature 249 264 1.6E-99 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DA442_17605 df2a82d39203dcb8a58b07bf0a10912c 540 PRINTS PR00701 60kDa inner membrane protein signature 459 481 1.6E-99 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DA442_17605 df2a82d39203dcb8a58b07bf0a10912c 540 PRINTS PR00701 60kDa inner membrane protein signature 71 92 1.6E-99 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DA442_17605 df2a82d39203dcb8a58b07bf0a10912c 540 PRINTS PR00701 60kDa inner membrane protein signature 161 181 1.6E-99 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DA442_17605 df2a82d39203dcb8a58b07bf0a10912c 540 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 532 26.047 T 14-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 DA442_25460 0877b8a0531896b48dccc5f743dd8724 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 3.5E-13 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_25460 0877b8a0531896b48dccc5f743dd8724 296 SUPERFAMILY SSF53850 94 294 4.93E-33 T 14-10-2018 DA442_25460 0877b8a0531896b48dccc5f743dd8724 296 Gene3D G3DSA:3.40.190.10 162 266 1.9E-55 T 14-10-2018 DA442_25460 0877b8a0531896b48dccc5f743dd8724 296 SUPERFAMILY SSF46785 3 84 1.76E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_25460 0877b8a0531896b48dccc5f743dd8724 296 Pfam PF03466 LysR substrate binding domain 94 292 7.9E-38 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_25460 0877b8a0531896b48dccc5f743dd8724 296 Gene3D G3DSA:1.10.10.10 1 85 1.7E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_25460 0877b8a0531896b48dccc5f743dd8724 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 4.5E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_25460 0877b8a0531896b48dccc5f743dd8724 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.5E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_25460 0877b8a0531896b48dccc5f743dd8724 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 4.5E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_25460 0877b8a0531896b48dccc5f743dd8724 296 Gene3D G3DSA:3.40.190.10 93 287 1.9E-55 T 14-10-2018 DA442_17215 1619725ad7aaadbe0df55de32b468e3e 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 9 120 2.9E-23 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 DA442_17215 1619725ad7aaadbe0df55de32b468e3e 127 TIGRFAM TIGR00494 crcB: protein CrcB 10 123 1.1E-29 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 DA442_17215 1619725ad7aaadbe0df55de32b468e3e 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 7 125 18.955 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 DA442_21745 c83c965317fc662c0d35128ab7058e56 273 Gene3D G3DSA:3.40.190.10 30 270 3.6E-82 T 14-10-2018 DA442_21745 c83c965317fc662c0d35128ab7058e56 273 Pfam PF12849 PBP superfamily domain 23 258 1.8E-39 T 14-10-2018 IPR024370 PBP domain DA442_21745 c83c965317fc662c0d35128ab7058e56 273 Gene3D G3DSA:3.40.190.10 99 233 3.6E-82 T 14-10-2018 DA442_21745 c83c965317fc662c0d35128ab7058e56 273 SUPERFAMILY SSF53850 16 272 4.43E-72 T 14-10-2018 DA442_21745 c83c965317fc662c0d35128ab7058e56 273 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 20 271 1.1E-75 T 14-10-2018 IPR011862 Phosphate binding protein GO:0042301 DA442_20755 4b987748784c32f2abcdf2437c65ecc3 430 Pfam PF00704 Glycosyl hydrolases family 18 24 415 8.7E-81 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 DA442_20755 4b987748784c32f2abcdf2437c65ecc3 430 SMART SM00636 22 415 5.8E-108 T 14-10-2018 IPR011583 Chitinase II GO:0008061 DA442_20755 4b987748784c32f2abcdf2437c65ecc3 430 ProSitePatterns PS01095 Chitinases family 18 active site. 168 176 - T 14-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 DA442_20755 4b987748784c32f2abcdf2437c65ecc3 430 SUPERFAMILY SSF54556 312 386 5.5E-18 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily DA442_20755 4b987748784c32f2abcdf2437c65ecc3 430 SUPERFAMILY SSF51445 18 417 1.11E-80 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DA442_20755 4b987748784c32f2abcdf2437c65ecc3 430 Gene3D G3DSA:3.20.20.80 22 421 8.0E-121 T 14-10-2018 DA442_20755 4b987748784c32f2abcdf2437c65ecc3 430 Gene3D G3DSA:3.10.50.10 311 389 8.0E-121 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily DA442_24600 fec552816bb6d4a6e60f7edbde90bfe2 346 SUPERFAMILY SSF64518 61 312 1.57E-6 T 14-10-2018 DA442_10670 52316c57fa24ce423d3416ed13c5fe2c 120 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 4 96 6.4E-33 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 DA442_10670 52316c57fa24ce423d3416ed13c5fe2c 120 PIRSF PIRSF006113 1 120 2.7E-53 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 DA442_10670 52316c57fa24ce423d3416ed13c5fe2c 120 SUPERFAMILY SSF55620 1 118 5.34E-41 T 14-10-2018 DA442_10670 52316c57fa24ce423d3416ed13c5fe2c 120 Gene3D G3DSA:3.30.479.10 1 120 7.2E-50 T 14-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 DA442_10670 52316c57fa24ce423d3416ed13c5fe2c 120 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 5 120 1.7E-35 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 DA442_08975 17b08298dbaafd39c828f545f1d794dd 474 Pfam PF00696 Amino acid kinase family 4 293 8.4E-24 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DA442_08975 17b08298dbaafd39c828f545f1d794dd 474 SUPERFAMILY SSF53633 5 306 1.47E-55 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DA442_08975 17b08298dbaafd39c828f545f1d794dd 474 Gene3D G3DSA:3.30.2130.10 311 463 4.8E-9 T 14-10-2018 DA442_08975 17b08298dbaafd39c828f545f1d794dd 474 Gene3D G3DSA:3.40.1160.10 3 306 9.4E-58 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DA442_08975 17b08298dbaafd39c828f545f1d794dd 474 SUPERFAMILY SSF55021 398 462 1.76E-8 T 14-10-2018 DA442_21640 8b51dcb816fabcae00b1180cd9c9cbed 301 PRINTS PR01021 OMPA domain signature 191 213 3.6E-16 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DA442_21640 8b51dcb816fabcae00b1180cd9c9cbed 301 PRINTS PR01021 OMPA domain signature 235 251 3.6E-16 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DA442_21640 8b51dcb816fabcae00b1180cd9c9cbed 301 PRINTS PR01021 OMPA domain signature 220 235 3.6E-16 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DA442_21640 8b51dcb816fabcae00b1180cd9c9cbed 301 Gene3D G3DSA:3.30.1330.60 175 291 8.7E-26 T 14-10-2018 IPR036737 OmpA-like domain superfamily DA442_21640 8b51dcb816fabcae00b1180cd9c9cbed 301 Gene3D G3DSA:3.30.1330.60 42 162 5.8E-25 T 14-10-2018 IPR036737 OmpA-like domain superfamily DA442_21640 8b51dcb816fabcae00b1180cd9c9cbed 301 SUPERFAMILY SSF103088 52 162 8.76E-24 T 14-10-2018 IPR036737 OmpA-like domain superfamily DA442_21640 8b51dcb816fabcae00b1180cd9c9cbed 301 SUPERFAMILY SSF103088 180 291 1.26E-26 T 14-10-2018 IPR036737 OmpA-like domain superfamily DA442_21640 8b51dcb816fabcae00b1180cd9c9cbed 301 Pfam PF00691 OmpA family 62 156 1.6E-16 T 14-10-2018 IPR006665 OmpA-like domain DA442_21640 8b51dcb816fabcae00b1180cd9c9cbed 301 Pfam PF00691 OmpA family 191 285 1.1E-17 T 14-10-2018 IPR006665 OmpA-like domain DA442_23845 c1d4ef9165c9525d0f8f6cb08fc25d2c 316 SUPERFAMILY SSF53850 29 311 1.29E-48 T 14-10-2018 DA442_23845 c1d4ef9165c9525d0f8f6cb08fc25d2c 316 Pfam PF09084 NMT1/THI5 like 37 248 2.4E-69 T 14-10-2018 IPR015168 SsuA/THI5-like DA442_23845 c1d4ef9165c9525d0f8f6cb08fc25d2c 316 Gene3D G3DSA:3.40.190.10 28 303 1.4E-71 T 14-10-2018 DA442_23845 c1d4ef9165c9525d0f8f6cb08fc25d2c 316 Gene3D G3DSA:3.40.190.10 109 209 1.4E-71 T 14-10-2018 DA442_19680 867694b683ddc859cbebe55f9280baa0 297 Gene3D G3DSA:1.10.10.60 188 296 1.0E-24 T 14-10-2018 DA442_19680 867694b683ddc859cbebe55f9280baa0 297 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 244 286 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DA442_19680 867694b683ddc859cbebe55f9280baa0 297 SUPERFAMILY SSF46689 243 293 1.51E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_19680 867694b683ddc859cbebe55f9280baa0 297 Pfam PF12833 Helix-turn-helix domain 213 292 2.4E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_19680 867694b683ddc859cbebe55f9280baa0 297 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 274 8.2E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DA442_19680 867694b683ddc859cbebe55f9280baa0 297 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 274 290 8.2E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DA442_19680 867694b683ddc859cbebe55f9280baa0 297 SMART SM00342 207 290 1.1E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_19680 867694b683ddc859cbebe55f9280baa0 297 SUPERFAMILY SSF51215 35 158 2.22E-7 T 14-10-2018 IPR037923 Transcription regulator HTH-like DA442_22865 b5d9e15cae111009929d104a6d55c850 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.9E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_22865 b5d9e15cae111009929d104a6d55c850 318 Gene3D G3DSA:1.10.10.10 2 86 6.5E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_22865 b5d9e15cae111009929d104a6d55c850 318 SUPERFAMILY SSF46785 4 88 5.01E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_22865 b5d9e15cae111009929d104a6d55c850 318 Pfam PF03466 LysR substrate binding domain 89 293 3.2E-36 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_22865 b5d9e15cae111009929d104a6d55c850 318 Gene3D G3DSA:3.40.190.290 91 294 1.7E-59 T 14-10-2018 DA442_22865 b5d9e15cae111009929d104a6d55c850 318 SUPERFAMILY SSF53850 90 297 1.55E-40 T 14-10-2018 DA442_17590 5836c0309a314a042ecde4fa787d4180 111 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 41 88 2.5E-12 T 14-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 DA442_17590 5836c0309a314a042ecde4fa787d4180 111 Pfam PF12728 Helix-turn-helix domain 41 89 3.3E-12 T 14-10-2018 DA442_17590 5836c0309a314a042ecde4fa787d4180 111 SUPERFAMILY SSF46955 40 90 5.86E-6 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DA442_01550 a9404b47b70ea5a99645541fc9be0819 330 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 318 34.701 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DA442_01550 a9404b47b70ea5a99645541fc9be0819 330 SMART SM00662 23 235 4.9E-104 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DA442_01550 a9404b47b70ea5a99645541fc9be0819 330 SUPERFAMILY SSF47789 252 326 1.44E-25 T 14-10-2018 DA442_01550 a9404b47b70ea5a99645541fc9be0819 330 Gene3D G3DSA:3.30.1360.10 17 229 9.5E-84 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DA442_01550 a9404b47b70ea5a99645541fc9be0819 330 SUPERFAMILY SSF56553 53 179 2.27E-40 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DA442_01550 a9404b47b70ea5a99645541fc9be0819 330 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 317 5.9E-112 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DA442_01550 a9404b47b70ea5a99645541fc9be0819 330 Gene3D G3DSA:2.170.120.12 53 178 9.5E-84 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DA442_01550 a9404b47b70ea5a99645541fc9be0819 330 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 157 4.2E-24 T 14-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DA442_01550 a9404b47b70ea5a99645541fc9be0819 330 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 257 330 2.0E-36 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DA442_01550 a9404b47b70ea5a99645541fc9be0819 330 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 246 309 7.1E-24 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DA442_01550 a9404b47b70ea5a99645541fc9be0819 330 Gene3D G3DSA:1.10.150.20 245 330 1.4E-38 T 14-10-2018 DA442_01550 a9404b47b70ea5a99645541fc9be0819 330 SUPERFAMILY SSF55257 7 234 3.53E-30 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DA442_01550 a9404b47b70ea5a99645541fc9be0819 330 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 229 2.5E-23 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DA442_13145 d67de2cd05769393f32547917b9b91c6 351 Gene3D G3DSA:3.20.20.190 21 350 2.5E-124 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 DA442_13145 d67de2cd05769393f32547917b9b91c6 351 SUPERFAMILY SSF51695 22 350 7.59E-91 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 DA442_13145 d67de2cd05769393f32547917b9b91c6 351 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 28 344 3.9E-64 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 DA442_21100 de245ba606430e812198c161efde9483 230 Gene3D G3DSA:3.40.50.2300 3 122 2.2E-33 T 14-10-2018 DA442_21100 de245ba606430e812198c161efde9483 230 SMART SM00862 151 227 2.2E-13 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DA442_21100 de245ba606430e812198c161efde9483 230 Gene3D G3DSA:1.10.10.10 123 230 4.2E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_21100 de245ba606430e812198c161efde9483 230 SMART SM00448 4 114 1.5E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_21100 de245ba606430e812198c161efde9483 230 SUPERFAMILY SSF46894 137 228 6.52E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DA442_21100 de245ba606430e812198c161efde9483 230 SUPERFAMILY SSF52172 4 130 1.85E-37 T 14-10-2018 IPR011006 CheY-like superfamily DA442_21100 de245ba606430e812198c161efde9483 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 227 2.6E-15 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DA442_21100 de245ba606430e812198c161efde9483 230 Pfam PF00072 Response regulator receiver domain 6 114 4.2E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_09035 13b2ed478a839f258e3e33feab6d3c40 227 Gene3D G3DSA:1.20.910.10 3 225 3.7E-57 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 DA442_09035 13b2ed478a839f258e3e33feab6d3c40 227 Pfam PF14518 Iron-containing redox enzyme 40 211 4.6E-26 T 14-10-2018 DA442_09035 13b2ed478a839f258e3e33feab6d3c40 227 SUPERFAMILY SSF48613 3 219 1.53E-58 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 DA442_09035 13b2ed478a839f258e3e33feab6d3c40 227 SMART SM01236 74 175 5.5E-8 T 14-10-2018 DA442_13205 8806f4447a48151643b99ca29c528979 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.1E-7 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DA442_13205 8806f4447a48151643b99ca29c528979 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.1E-7 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DA442_13205 8806f4447a48151643b99ca29c528979 332 SMART SM00354 1 71 2.1E-32 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DA442_13205 8806f4447a48151643b99ca29c528979 332 Gene3D G3DSA:3.40.50.2300 160 289 1.8E-73 T 14-10-2018 DA442_13205 8806f4447a48151643b99ca29c528979 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 9.1E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DA442_13205 8806f4447a48151643b99ca29c528979 332 Gene3D G3DSA:3.40.50.2300 56 305 1.8E-73 T 14-10-2018 DA442_13205 8806f4447a48151643b99ca29c528979 332 Gene3D G3DSA:1.10.260.40 1 55 3.0E-22 T 14-10-2018 DA442_13205 8806f4447a48151643b99ca29c528979 332 Pfam PF13377 Periplasmic binding protein-like domain 168 329 9.8E-38 T 14-10-2018 DA442_13205 8806f4447a48151643b99ca29c528979 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 DA442_13205 8806f4447a48151643b99ca29c528979 332 SUPERFAMILY SSF47413 1 60 6.28E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DA442_13205 8806f4447a48151643b99ca29c528979 332 SUPERFAMILY SSF53822 61 330 2.94E-83 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DA442_22970 41eff1b0ba54ad6bca05102e65e43014 209 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 5 206 8.0E-83 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 DA442_22970 41eff1b0ba54ad6bca05102e65e43014 209 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 14-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 DA442_22970 41eff1b0ba54ad6bca05102e65e43014 209 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 14-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 DA442_22970 41eff1b0ba54ad6bca05102e65e43014 209 SUPERFAMILY SSF51569 4 208 2.75E-67 T 14-10-2018 DA442_22970 41eff1b0ba54ad6bca05102e65e43014 209 Pfam PF01081 KDPG and KHG aldolase 4 198 3.7E-78 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 DA442_22970 41eff1b0ba54ad6bca05102e65e43014 209 Gene3D G3DSA:3.20.20.70 1 209 6.6E-76 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_24605 61cb72de8453e2a916ceb694886613c4 904 Pfam PF10101 Predicted membrane protein (DUF2339) 143 893 2.2E-109 T 14-10-2018 IPR019286 Protein of unknown function DUF2339, transmembrane DA442_24605 61cb72de8453e2a916ceb694886613c4 904 PIRSF PIRSF035905 1 904 0.0 T 14-10-2018 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein DA442_01320 115c29f3ba83bc922d17b85c14930d36 388 SUPERFAMILY SSF51735 1 194 6.47E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_01320 115c29f3ba83bc922d17b85c14930d36 388 SUPERFAMILY SSF48179 191 287 7.03E-31 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DA442_01320 115c29f3ba83bc922d17b85c14930d36 388 Gene3D G3DSA:3.40.50.720 1 193 1.9E-60 T 14-10-2018 DA442_01320 115c29f3ba83bc922d17b85c14930d36 388 SUPERFAMILY SSF52413 283 387 5.62E-28 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 DA442_01320 115c29f3ba83bc922d17b85c14930d36 388 PIRSF PIRSF000124 1 388 2.3E-138 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 DA442_01320 115c29f3ba83bc922d17b85c14930d36 388 Gene3D G3DSA:1.20.5.100 194 220 6.9E-20 T 14-10-2018 DA442_01320 115c29f3ba83bc922d17b85c14930d36 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 4.2E-105 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 DA442_01320 115c29f3ba83bc922d17b85c14930d36 388 PIRSF PIRSF500134 338 388 0.019 T 14-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 DA442_01320 115c29f3ba83bc922d17b85c14930d36 388 PIRSF PIRSF500134 1 344 9.6E-123 T 14-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 DA442_01320 115c29f3ba83bc922d17b85c14930d36 388 Gene3D G3DSA:3.40.50.720 222 388 1.1E-68 T 14-10-2018 DA442_01320 115c29f3ba83bc922d17b85c14930d36 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 375 1.0E-7 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DA442_01320 115c29f3ba83bc922d17b85c14930d36 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 1.6E-27 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DA442_01320 115c29f3ba83bc922d17b85c14930d36 388 SMART SM00984 300 387 2.2E-15 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DA442_01320 115c29f3ba83bc922d17b85c14930d36 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 168 2.0E-33 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DA442_18425 909bac87cb6d12a7d6e3b9872ad85478 682 Gene3D G3DSA:3.30.565.10 268 416 7.2E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_18425 909bac87cb6d12a7d6e3b9872ad85478 682 SUPERFAMILY SSF47384 170 210 8.44E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DA442_18425 909bac87cb6d12a7d6e3b9872ad85478 682 Gene3D G3DSA:3.40.50.2300 559 682 1.0E-35 T 14-10-2018 DA442_18425 909bac87cb6d12a7d6e3b9872ad85478 682 SMART SM00448 564 678 4.7E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_18425 909bac87cb6d12a7d6e3b9872ad85478 682 SUPERFAMILY SSF52172 564 682 1.29E-34 T 14-10-2018 IPR011006 CheY-like superfamily DA442_18425 909bac87cb6d12a7d6e3b9872ad85478 682 Gene3D G3DSA:1.10.287.130 168 264 2.7E-5 T 14-10-2018 DA442_18425 909bac87cb6d12a7d6e3b9872ad85478 682 SMART SM00387 306 414 7.7E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_18425 909bac87cb6d12a7d6e3b9872ad85478 682 PRINTS PR00344 Bacterial sensor protein C-terminal signature 344 358 3.1E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_18425 909bac87cb6d12a7d6e3b9872ad85478 682 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 411 3.1E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_18425 909bac87cb6d12a7d6e3b9872ad85478 682 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 392 3.1E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_18425 909bac87cb6d12a7d6e3b9872ad85478 682 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 372 3.1E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_18425 909bac87cb6d12a7d6e3b9872ad85478 682 SUPERFAMILY SSF55874 251 415 1.15E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_18425 909bac87cb6d12a7d6e3b9872ad85478 682 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 309 411 8.2E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_18425 909bac87cb6d12a7d6e3b9872ad85478 682 Pfam PF00072 Response regulator receiver domain 566 678 4.6E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_23000 ed7a042cfb5e6f62f3dd798851807e7e 333 Pfam PF02274 Amidinotransferase 31 326 5.5E-62 T 14-10-2018 DA442_23000 ed7a042cfb5e6f62f3dd798851807e7e 333 PIRSF PIRSF028188 7 329 3.7E-159 T 14-10-2018 IPR014541 Predicted amidinotransferase, FN0238 type DA442_23000 ed7a042cfb5e6f62f3dd798851807e7e 333 SUPERFAMILY SSF55909 27 321 2.32E-36 T 14-10-2018 DA442_23000 ed7a042cfb5e6f62f3dd798851807e7e 333 Gene3D G3DSA:3.75.10.10 26 321 8.8E-43 T 14-10-2018 DA442_23975 b54f8a437cd6bb6a7fc5ac84a317ad7c 251 PIRSF PIRSF028069 1 251 3.5E-109 T 14-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 DA442_23975 b54f8a437cd6bb6a7fc5ac84a317ad7c 251 Pfam PF11932 Protein of unknown function (DUF3450) 6 245 5.2E-87 T 14-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 DA442_23630 c7eca86d0cee13f72e9b678b3ad677de 257 Gene3D G3DSA:3.40.50.80 122 257 3.0E-45 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DA442_23630 c7eca86d0cee13f72e9b678b3ad677de 257 Gene3D G3DSA:2.40.30.10 1 119 7.3E-32 T 14-10-2018 DA442_23630 c7eca86d0cee13f72e9b678b3ad677de 257 SUPERFAMILY SSF63380 6 117 6.99E-11 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DA442_23630 c7eca86d0cee13f72e9b678b3ad677de 257 Pfam PF04954 Siderophore-interacting protein 127 239 3.0E-31 T 14-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain DA442_23630 c7eca86d0cee13f72e9b678b3ad677de 257 Pfam PF08021 Siderophore-interacting FAD-binding domain 12 119 2.1E-31 T 14-10-2018 IPR013113 FAD-binding 9, siderophore-interacting DA442_12220 589f876c337f599e61aa236cec070d07 154 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 154 1.3E-35 T 14-10-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0101006 DA442_12220 589f876c337f599e61aa236cec070d07 154 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 69 1.3E-9 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DA442_12220 589f876c337f599e61aa236cec070d07 154 Gene3D G3DSA:3.40.50.1240 1 154 2.6E-34 T 14-10-2018 IPR029033 Histidine phosphatase superfamily DA442_12220 589f876c337f599e61aa236cec070d07 154 SMART SM00855 2 116 5.9E-6 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DA442_12220 589f876c337f599e61aa236cec070d07 154 PIRSF PIRSF000709 81 148 40.0 T 14-10-2018 DA442_12220 589f876c337f599e61aa236cec070d07 154 PIRSF PIRSF000709 1 90 0.0035 T 14-10-2018 DA442_12220 589f876c337f599e61aa236cec070d07 154 SUPERFAMILY SSF53254 1 144 2.57E-21 T 14-10-2018 IPR029033 Histidine phosphatase superfamily DA442_11000 4555d651a67d87e922d5e36fbf30401f 206 SUPERFAMILY SSF55821 1 204 3.66E-64 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DA442_11000 4555d651a67d87e922d5e36fbf30401f 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 4.0E-70 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 DA442_11000 4555d651a67d87e922d5e36fbf30401f 206 Gene3D G3DSA:3.90.870.10 1 205 4.6E-68 T 14-10-2018 DA442_11000 4555d651a67d87e922d5e36fbf30401f 206 Pfam PF01300 Telomere recombination 23 198 2.6E-46 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 DA442_00305 b011e60f683967232c030d71ae3fbc3e 369 Gene3D G3DSA:3.40.50.2300 104 345 3.4E-65 T 14-10-2018 DA442_00305 b011e60f683967232c030d71ae3fbc3e 369 ProSitePatterns PS00356 LacI-type HTH domain signature. 46 64 - T 14-10-2018 DA442_00305 b011e60f683967232c030d71ae3fbc3e 369 SUPERFAMILY SSF47413 43 101 2.35E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DA442_00305 b011e60f683967232c030d71ae3fbc3e 369 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 102 347 6.0E-28 T 14-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain DA442_00305 b011e60f683967232c030d71ae3fbc3e 369 SMART SM00354 43 113 2.6E-26 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DA442_00305 b011e60f683967232c030d71ae3fbc3e 369 Gene3D G3DSA:1.10.260.40 35 101 2.3E-17 T 14-10-2018 DA442_00305 b011e60f683967232c030d71ae3fbc3e 369 Pfam PF00356 Bacterial regulatory proteins, lacI family 45 90 2.7E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DA442_00305 b011e60f683967232c030d71ae3fbc3e 369 SUPERFAMILY SSF53822 101 355 6.21E-56 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DA442_00305 b011e60f683967232c030d71ae3fbc3e 369 Gene3D G3DSA:3.40.50.2300 201 329 3.4E-65 T 14-10-2018 DA442_18045 1c24edfd3b83be727a7cde1b1770cc41 311 SUPERFAMILY SSF46785 10 89 5.44E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_18045 1c24edfd3b83be727a7cde1b1770cc41 311 Gene3D G3DSA:3.40.190.10 102 174 5.9E-16 T 14-10-2018 DA442_18045 1c24edfd3b83be727a7cde1b1770cc41 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 3.0E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_18045 1c24edfd3b83be727a7cde1b1770cc41 311 Gene3D G3DSA:1.10.10.10 4 91 3.2E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_18045 1c24edfd3b83be727a7cde1b1770cc41 311 Pfam PF03466 LysR substrate binding domain 100 288 2.3E-13 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_18045 1c24edfd3b83be727a7cde1b1770cc41 311 SUPERFAMILY SSF53850 99 305 5.61E-17 T 14-10-2018 DA442_18045 1c24edfd3b83be727a7cde1b1770cc41 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 59 1.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_18045 1c24edfd3b83be727a7cde1b1770cc41 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 38 1.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_18045 1c24edfd3b83be727a7cde1b1770cc41 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 48 1.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_18045 1c24edfd3b83be727a7cde1b1770cc41 311 Gene3D G3DSA:3.40.190.10 175 275 5.9E-16 T 14-10-2018 DA442_07955 5b4dcd272bd54df3a8fb41c99ae59019 456 PIRSF PIRSF006603 5 452 8.2E-66 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DA442_07955 5b4dcd272bd54df3a8fb41c99ae59019 456 Pfam PF01554 MatE 243 404 8.1E-39 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DA442_07955 5b4dcd272bd54df3a8fb41c99ae59019 456 Pfam PF01554 MatE 17 176 4.4E-37 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DA442_07955 5b4dcd272bd54df3a8fb41c99ae59019 456 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 421 8.1E-126 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DA442_02150 4362ed51527e47f5fa2de35a106f4bc8 203 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 24 202 1.7E-53 T 14-10-2018 IPR016476 SH3 domain protein DA442_02150 4362ed51527e47f5fa2de35a106f4bc8 203 PIRSF PIRSF006158 1 203 8.9E-71 T 14-10-2018 IPR016476 SH3 domain protein DA442_02150 4362ed51527e47f5fa2de35a106f4bc8 203 Gene3D G3DSA:2.30.30.40 31 86 4.3E-10 T 14-10-2018 DA442_02150 4362ed51527e47f5fa2de35a106f4bc8 203 Pfam PF08239 Bacterial SH3 domain 33 82 9.7E-10 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type DA442_02150 4362ed51527e47f5fa2de35a106f4bc8 203 SMART SM00287 20 86 9.7E-11 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type DA442_23435 8623fb919deb2a23cc72e02561224060 131 SUPERFAMILY SSF51316 13 130 1.01E-30 T 14-10-2018 IPR011057 Mss4-like superfamily DA442_23435 8623fb919deb2a23cc72e02561224060 131 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 38 114 2.3E-9 T 14-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 DA442_23435 8623fb919deb2a23cc72e02561224060 131 Gene3D G3DSA:2.170.150.70 15 131 1.7E-37 T 14-10-2018 DA442_21585 2693570e5904102782bcc329500bc0bf 681 Pfam PF02378 Phosphotransferase system, EIIC 37 330 5.3E-15 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DA442_21585 2693570e5904102782bcc329500bc0bf 681 Gene3D G3DSA:3.20.20.450 432 679 1.3E-65 T 14-10-2018 IPR035919 EAL domain superfamily DA442_21585 2693570e5904102782bcc329500bc0bf 681 SMART SM00052 433 675 2.6E-52 T 14-10-2018 IPR001633 EAL domain DA442_21585 2693570e5904102782bcc329500bc0bf 681 Pfam PF00563 EAL domain 441 670 2.5E-57 T 14-10-2018 IPR001633 EAL domain DA442_21585 2693570e5904102782bcc329500bc0bf 681 SUPERFAMILY SSF141868 439 677 6.67E-65 T 14-10-2018 IPR035919 EAL domain superfamily DA442_09895 c60583d0b293f62850aebffdea0ecb54 133 Pfam PF03692 Putative zinc- or iron-chelating domain 3 95 9.6E-8 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein DA442_14785 b9c733cc32cf84337266bc1e6ea91e01 185 Pfam PF02325 YGGT family 109 173 1.4E-18 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 DA442_14785 b9c733cc32cf84337266bc1e6ea91e01 185 Pfam PF02325 YGGT family 10 77 2.2E-19 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 DA442_24355 9ec44f066c8cf7c846deca3238964401 418 Gene3D G3DSA:3.40.50.1110 133 413 3.2E-39 T 14-10-2018 IPR036514 SGNH hydrolase superfamily DA442_24355 9ec44f066c8cf7c846deca3238964401 418 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 147 158 - T 14-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 DA442_24355 9ec44f066c8cf7c846deca3238964401 418 SUPERFAMILY SSF52266 146 408 3.66E-22 T 14-10-2018 DA442_24355 9ec44f066c8cf7c846deca3238964401 418 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 147 405 4.8E-18 T 14-10-2018 IPR001087 GDSL lipase/esterase GO:0016788 DA442_19300 6bcc84d5392ef3ad6d9d84c32103385a 693 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 28 693 1.8E-142 T 14-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 DA442_19300 6bcc84d5392ef3ad6d9d84c32103385a 693 Gene3D G3DSA:2.170.130.10 38 165 3.4E-34 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DA442_19300 6bcc84d5392ef3ad6d9d84c32103385a 693 SUPERFAMILY SSF56935 19 693 7.59E-119 T 14-10-2018 DA442_19300 6bcc84d5392ef3ad6d9d84c32103385a 693 Pfam PF00593 TonB dependent receptor 175 691 6.9E-63 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DA442_19300 6bcc84d5392ef3ad6d9d84c32103385a 693 Gene3D G3DSA:2.40.170.20 166 693 1.2E-115 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DA442_19300 6bcc84d5392ef3ad6d9d84c32103385a 693 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 28 693 3.1E-157 T 14-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 DA442_19300 6bcc84d5392ef3ad6d9d84c32103385a 693 Pfam PF07715 TonB-dependent Receptor Plug Domain 42 151 5.7E-24 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain DA442_19540 eef41c3caa7da9d20b7a0b2b153f756c 285 Pfam PF02311 AraC-like ligand binding domain 33 107 4.3E-5 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 DA442_19540 eef41c3caa7da9d20b7a0b2b153f756c 285 SUPERFAMILY SSF46689 227 277 8.96E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_19540 eef41c3caa7da9d20b7a0b2b153f756c 285 SUPERFAMILY SSF51215 28 162 4.05E-19 T 14-10-2018 IPR037923 Transcription regulator HTH-like DA442_19540 eef41c3caa7da9d20b7a0b2b153f756c 285 Gene3D G3DSA:1.10.10.60 171 282 4.3E-26 T 14-10-2018 DA442_19540 eef41c3caa7da9d20b7a0b2b153f756c 285 Gene3D G3DSA:2.60.120.280 30 141 2.1E-9 T 14-10-2018 DA442_19540 eef41c3caa7da9d20b7a0b2b153f756c 285 SUPERFAMILY SSF46689 174 225 1.97E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_19540 eef41c3caa7da9d20b7a0b2b153f756c 285 Pfam PF12833 Helix-turn-helix domain 197 275 3.9E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_19540 eef41c3caa7da9d20b7a0b2b153f756c 285 SMART SM00342 191 274 1.2E-27 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_01130 e991601ecb86915bef31d637873d1e00 271 SUPERFAMILY SSF56317 1 257 5.1E-56 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DA442_01130 e991601ecb86915bef31d637873d1e00 271 Pfam PF00795 Carbon-nitrogen hydrolase 2 227 1.0E-34 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 DA442_01130 e991601ecb86915bef31d637873d1e00 271 Gene3D G3DSA:3.60.110.10 1 262 5.4E-65 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DA442_20190 be59f696335fd9f01eb8fa35c6cbaf62 637 Pfam PF13424 Tetratricopeptide repeat 156 227 3.8E-9 T 14-10-2018 DA442_20190 be59f696335fd9f01eb8fa35c6cbaf62 637 SMART SM00267 461 634 7.1E-53 T 14-10-2018 IPR000160 GGDEF domain DA442_20190 be59f696335fd9f01eb8fa35c6cbaf62 637 Gene3D G3DSA:3.30.70.270 470 637 3.6E-48 T 14-10-2018 DA442_20190 be59f696335fd9f01eb8fa35c6cbaf62 637 Gene3D G3DSA:1.25.40.10 141 232 4.9E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_20190 be59f696335fd9f01eb8fa35c6cbaf62 637 SMART SM00028 239 272 55.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_20190 be59f696335fd9f01eb8fa35c6cbaf62 637 SMART SM00028 319 352 240.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_20190 be59f696335fd9f01eb8fa35c6cbaf62 637 SMART SM00028 361 394 400.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_20190 be59f696335fd9f01eb8fa35c6cbaf62 637 SMART SM00028 195 228 0.068 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_20190 be59f696335fd9f01eb8fa35c6cbaf62 637 SMART SM00028 155 188 120.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_20190 be59f696335fd9f01eb8fa35c6cbaf62 637 Pfam PF00990 Diguanylate cyclase, GGDEF domain 473 630 1.4E-37 T 14-10-2018 IPR000160 GGDEF domain DA442_20190 be59f696335fd9f01eb8fa35c6cbaf62 637 Gene3D G3DSA:1.25.40.10 233 450 3.3E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_20190 be59f696335fd9f01eb8fa35c6cbaf62 637 SUPERFAMILY SSF48452 175 410 3.72E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_20190 be59f696335fd9f01eb8fa35c6cbaf62 637 SUPERFAMILY SSF55073 477 634 9.42E-42 T 14-10-2018 IPR029787 Nucleotide cyclase DA442_20190 be59f696335fd9f01eb8fa35c6cbaf62 637 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 469 633 5.2E-42 T 14-10-2018 IPR000160 GGDEF domain DA442_23275 5feb8c7415ba544b0c54d646d9eefcc4 422 Pfam PF02687 FtsX-like permease family 315 411 1.3E-9 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DA442_23275 5feb8c7415ba544b0c54d646d9eefcc4 422 Pfam PF12704 MacB-like periplasmic core domain 23 249 1.9E-14 T 14-10-2018 IPR025857 MacB-like periplasmic core domain DA442_05970 c98951fd5a58d2478d0e5c3d5583b1dd 820 SUPERFAMILY SSF50692 669 817 2.49E-42 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily DA442_05970 c98951fd5a58d2478d0e5c3d5583b1dd 820 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 503 520 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 DA442_05970 c98951fd5a58d2478d0e5c3d5583b1dd 820 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 716 743 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 DA442_05970 c98951fd5a58d2478d0e5c3d5583b1dd 820 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 28 2.1E-4 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DA442_05970 c98951fd5a58d2478d0e5c3d5583b1dd 820 Gene3D G3DSA:3.40.228.10 179 641 5.9E-240 T 14-10-2018 DA442_05970 c98951fd5a58d2478d0e5c3d5583b1dd 820 Gene3D G3DSA:2.40.40.20 649 813 3.1E-48 T 14-10-2018 DA442_05970 c98951fd5a58d2478d0e5c3d5583b1dd 820 Gene3D G3DSA:3.90.55.10 82 615 5.9E-240 T 14-10-2018 DA442_05970 c98951fd5a58d2478d0e5c3d5583b1dd 820 Pfam PF01568 Molydopterin dinucleotide binding domain 676 796 7.3E-24 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 DA442_05970 c98951fd5a58d2478d0e5c3d5583b1dd 820 Gene3D G3DSA:3.40.50.740 87 569 5.9E-240 T 14-10-2018 DA442_05970 c98951fd5a58d2478d0e5c3d5583b1dd 820 SUPERFAMILY SSF53706 42 660 1.1E-167 T 14-10-2018 DA442_05970 c98951fd5a58d2478d0e5c3d5583b1dd 820 TIGRFAM TIGR02164 torA: trimethylamine-N-oxide reductase TorA 1 819 0.0 T 14-10-2018 IPR011887 Trimethylamine-N-oxide reductase TorA GO:0030151|GO:0042597|GO:0050626 DA442_05970 c98951fd5a58d2478d0e5c3d5583b1dd 820 Pfam PF00384 Molybdopterin oxidoreductase 87 560 1.5E-79 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DA442_19080 9afa09026528b4ae4949f57c7615d3b6 222 Gene3D G3DSA:3.40.50.1000 9 194 1.1E-42 T 14-10-2018 IPR023214 HAD superfamily DA442_19080 9afa09026528b4ae4949f57c7615d3b6 222 SUPERFAMILY SSF56784 5 218 2.27E-44 T 14-10-2018 IPR036412 HAD-like superfamily DA442_19080 9afa09026528b4ae4949f57c7615d3b6 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 188 9.3E-27 T 14-10-2018 DA442_19080 9afa09026528b4ae4949f57c7615d3b6 222 Gene3D G3DSA:1.10.150.240 21 88 1.1E-42 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DA442_19080 9afa09026528b4ae4949f57c7615d3b6 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 9 189 5.4E-13 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DA442_09250 54dd5dea770d8034786b6546fdc71255 425 Gene3D G3DSA:3.30.9.10 122 342 2.2E-69 T 14-10-2018 DA442_09250 54dd5dea770d8034786b6546fdc71255 425 SUPERFAMILY SSF51905 28 409 3.41E-42 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_09250 54dd5dea770d8034786b6546fdc71255 425 Gene3D G3DSA:3.50.50.60 29 380 2.2E-69 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_09250 54dd5dea770d8034786b6546fdc71255 425 Pfam PF01266 FAD dependent oxidoreductase 29 379 2.1E-55 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DA442_15245 08d2c1851b10f1d9dee4bb0ad3f7f4a5 1292 Pfam PF13116 Protein of unknown function 506 792 3.0E-94 T 14-10-2018 IPR025263 Domain of unknown function DUF3971 DA442_15245 08d2c1851b10f1d9dee4bb0ad3f7f4a5 1292 Pfam PF13502 AsmA-like C-terminal region 1030 1270 5.6E-57 T 14-10-2018 IPR032712 AsmA-like, C-terminal DA442_15245 08d2c1851b10f1d9dee4bb0ad3f7f4a5 1292 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 7 1280 0.0 T 14-10-2018 IPR011836 Conserved hypothetical protein CHP02099 DA442_01845 f3a12b8eecc5201e61b5809378d6a827 200 Pfam PF00694 Aconitase C-terminal domain 1 125 6.2E-39 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 DA442_01845 f3a12b8eecc5201e61b5809378d6a827 200 SUPERFAMILY SSF52016 1 196 7.26E-60 T 14-10-2018 DA442_01845 f3a12b8eecc5201e61b5809378d6a827 200 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 44.361 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 DA442_01845 f3a12b8eecc5201e61b5809378d6a827 200 Gene3D G3DSA:3.20.19.10 1 180 2.1E-77 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 DA442_01845 f3a12b8eecc5201e61b5809378d6a827 200 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 188 7.2E-99 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 DA442_17510 d732107dd41fb44e867f74c1060d4dde 211 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 16 205 28.571 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 DA442_17510 d732107dd41fb44e867f74c1060d4dde 211 Pfam PF02527 rRNA small subunit methyltransferase G 23 204 4.5E-63 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 DA442_17510 d732107dd41fb44e867f74c1060d4dde 211 PIRSF PIRSF003078 2 211 2.5E-58 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 DA442_17510 d732107dd41fb44e867f74c1060d4dde 211 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 29 207 3.3E-57 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 DA442_17510 d732107dd41fb44e867f74c1060d4dde 211 SUPERFAMILY SSF53335 8 209 3.38E-40 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_17510 d732107dd41fb44e867f74c1060d4dde 211 Gene3D G3DSA:3.40.50.150 4 210 1.9E-67 T 14-10-2018 DA442_02160 04dfceee36ca7cfbc3f84365d17eca1a 228 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 6 227 4.2E-67 T 14-10-2018 IPR002727 Protein of unknown function DUF47 DA442_02160 04dfceee36ca7cfbc3f84365d17eca1a 228 Gene3D G3DSA:1.20.58.220 2 227 3.1E-65 T 14-10-2018 IPR038078 PhoU-like domain superfamily DA442_02160 04dfceee36ca7cfbc3f84365d17eca1a 228 SUPERFAMILY SSF109755 31 218 1.24E-15 T 14-10-2018 DA442_02160 04dfceee36ca7cfbc3f84365d17eca1a 228 Pfam PF01865 Protein of unknown function DUF47 9 225 2.1E-65 T 14-10-2018 IPR018445 Putative phosphate transport regulator DA442_10310 344265f1689998e0e5a4079a88efb9b6 29 Pfam PF11665 Protein of unknown function (DUF3265) 2 29 1.1E-10 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_21030 9c352f01b724601af8f33d8ad0601139 460 PIRSF PIRSF006603 14 459 6.5E-82 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DA442_21030 9c352f01b724601af8f33d8ad0601139 460 Pfam PF01554 MatE 37 197 1.2E-21 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DA442_21030 9c352f01b724601af8f33d8ad0601139 460 Pfam PF01554 MatE 256 413 2.1E-17 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DA442_21030 9c352f01b724601af8f33d8ad0601139 460 TIGRFAM TIGR00797 matE: MATE efflux family protein 37 419 1.8E-46 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DA442_02365 d5d236bb8302b7a3ced917b47d35e6c7 355 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 8 144 2.2E-47 T 14-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DA442_02365 d5d236bb8302b7a3ced917b47d35e6c7 355 SUPERFAMILY SSF53756 5 352 5.94E-128 T 14-10-2018 DA442_02365 d5d236bb8302b7a3ced917b47d35e6c7 355 Gene3D G3DSA:3.40.50.2000 8 160 3.3E-122 T 14-10-2018 DA442_02365 d5d236bb8302b7a3ced917b47d35e6c7 355 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 7 352 34.95 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DA442_02365 d5d236bb8302b7a3ced917b47d35e6c7 355 Gene3D G3DSA:3.40.50.2000 161 318 3.3E-122 T 14-10-2018 DA442_02365 d5d236bb8302b7a3ced917b47d35e6c7 355 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 184 337 2.6E-34 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 DA442_02365 d5d236bb8302b7a3ced917b47d35e6c7 355 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 348 5.0E-119 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DA442_02385 b9cc649ae8f4331fff514f0ae9061d26 409 Gene3D G3DSA:3.40.50.1440 5 220 2.4E-80 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 DA442_02385 b9cc649ae8f4331fff514f0ae9061d26 409 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 331 1.3E-136 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 DA442_02385 b9cc649ae8f4331fff514f0ae9061d26 409 SUPERFAMILY SSF52490 13 208 8.24E-70 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 DA442_02385 b9cc649ae8f4331fff514f0ae9061d26 409 Pfam PF12327 FtsZ family, C-terminal domain 222 316 2.1E-36 T 14-10-2018 IPR024757 Cell division protein FtsZ, C-terminal DA442_02385 b9cc649ae8f4331fff514f0ae9061d26 409 Gene3D G3DSA:3.30.1330.20 221 327 1.0E-34 T 14-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 DA442_02385 b9cc649ae8f4331fff514f0ae9061d26 409 SUPERFAMILY SSF55307 204 320 7.33E-43 T 14-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 DA442_02385 b9cc649ae8f4331fff514f0ae9061d26 409 SMART SM00864 13 205 8.2E-113 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DA442_02385 b9cc649ae8f4331fff514f0ae9061d26 409 SMART SM00865 207 325 2.9E-56 T 14-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 DA442_02385 b9cc649ae8f4331fff514f0ae9061d26 409 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 4.0E-40 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DA442_02385 b9cc649ae8f4331fff514f0ae9061d26 409 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 396 38.212 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 DA442_02385 b9cc649ae8f4331fff514f0ae9061d26 409 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 DA442_02385 b9cc649ae8f4331fff514f0ae9061d26 409 PRINTS PR00423 Cell division protein FtsZ signature 126 147 6.1E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DA442_02385 b9cc649ae8f4331fff514f0ae9061d26 409 PRINTS PR00423 Cell division protein FtsZ signature 189 211 6.1E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DA442_02385 b9cc649ae8f4331fff514f0ae9061d26 409 PRINTS PR00423 Cell division protein FtsZ signature 98 118 6.1E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DA442_02385 b9cc649ae8f4331fff514f0ae9061d26 409 PRINTS PR00423 Cell division protein FtsZ signature 212 233 6.1E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DA442_02385 b9cc649ae8f4331fff514f0ae9061d26 409 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 DA442_25275 4583289f0a5fea50fd753935abf8f70c 54 ProSitePatterns PS01309 Uncharacterized protein family UPF0057 signature. 10 25 - T 14-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 DA442_25275 4583289f0a5fea50fd753935abf8f70c 54 Pfam PF01679 Proteolipid membrane potential modulator 6 52 2.4E-20 T 14-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 DA442_18350 4ae9b44637d5d6a41c5ccc73be602b51 215 Pfam PF13505 Outer membrane protein beta-barrel domain 5 215 8.5E-18 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel DA442_18350 4ae9b44637d5d6a41c5ccc73be602b51 215 Gene3D G3DSA:2.40.160.20 17 215 1.0E-22 T 14-10-2018 DA442_18350 4ae9b44637d5d6a41c5ccc73be602b51 215 SUPERFAMILY SSF56925 20 215 3.4E-23 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DA442_11725 36a37f6dd8e8ec6637cee1dfc3105d24 170 SUPERFAMILY SSF53218 7 168 3.01E-47 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily DA442_11725 36a37f6dd8e8ec6637cee1dfc3105d24 170 Gene3D G3DSA:3.40.980.10 2 170 1.1E-51 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily DA442_11725 36a37f6dd8e8ec6637cee1dfc3105d24 170 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 7 168 9.9E-85 T 14-10-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 DA442_11725 36a37f6dd8e8ec6637cee1dfc3105d24 170 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 12 152 4.6E-37 T 14-10-2018 IPR001453 MoaB/Mog domain DA442_11725 36a37f6dd8e8ec6637cee1dfc3105d24 170 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 72 85 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 DA442_11725 36a37f6dd8e8ec6637cee1dfc3105d24 170 SMART SM00852 14 158 2.5E-27 T 14-10-2018 IPR001453 MoaB/Mog domain DA442_11725 36a37f6dd8e8ec6637cee1dfc3105d24 170 Pfam PF00994 Probable molybdopterin binding domain 14 156 2.0E-34 T 14-10-2018 IPR001453 MoaB/Mog domain DA442_11725 36a37f6dd8e8ec6637cee1dfc3105d24 170 PIRSF PIRSF006443 1 166 2.6E-66 T 14-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 DA442_06895 87521a27b20c723b6a6aad17c8d1203f 368 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 271 354 1.4E-23 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DA442_06895 87521a27b20c723b6a6aad17c8d1203f 368 ProSitePatterns PS00211 ABC transporters family signature. 192 206 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_06895 87521a27b20c723b6a6aad17c8d1203f 368 Pfam PF00005 ABC transporter 63 219 1.2E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_06895 87521a27b20c723b6a6aad17c8d1203f 368 SUPERFAMILY SSF52540 42 290 9.74E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_06895 87521a27b20c723b6a6aad17c8d1203f 368 SMART SM00382 71 269 8.2E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_06895 87521a27b20c723b6a6aad17c8d1203f 368 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 271 335 8.5E-19 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DA442_06895 87521a27b20c723b6a6aad17c8d1203f 368 Gene3D G3DSA:3.40.50.300 40 366 2.9E-99 T 14-10-2018 DA442_06530 aa0cc5899ab3a136ba02feb93f8b659c 511 Pfam PF00221 Aromatic amino acid lyase 12 470 1.6E-188 T 14-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 DA442_06530 aa0cc5899ab3a136ba02feb93f8b659c 511 Gene3D G3DSA:1.10.275.10 2 197 1.3E-70 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal DA442_06530 aa0cc5899ab3a136ba02feb93f8b659c 511 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 504 44.234 T 14-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DA442_06530 aa0cc5899ab3a136ba02feb93f8b659c 511 SUPERFAMILY SSF48557 5 503 8.63E-193 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 DA442_06530 aa0cc5899ab3a136ba02feb93f8b659c 511 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 5 503 5.0E-215 T 14-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DA442_06530 aa0cc5899ab3a136ba02feb93f8b659c 511 Gene3D G3DSA:1.20.200.10 198 509 1.2E-122 T 14-10-2018 DA442_06530 aa0cc5899ab3a136ba02feb93f8b659c 511 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 14-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 DA442_00905 f475c5103be5b523698fb9f01ae693c9 279 Pfam PF00005 ABC transporter 32 181 6.6E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_00905 f475c5103be5b523698fb9f01ae693c9 279 SUPERFAMILY SSF52540 6 254 3.31E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_00905 f475c5103be5b523698fb9f01ae693c9 279 SMART SM00382 40 240 1.4E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_00905 f475c5103be5b523698fb9f01ae693c9 279 Gene3D G3DSA:3.40.50.300 3 279 2.9E-88 T 14-10-2018 DA442_00905 f475c5103be5b523698fb9f01ae693c9 279 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_00755 5206b0fd408fb81a93c42fe911e01a7d 189 Pfam PF00293 NUDIX domain 46 154 1.2E-15 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DA442_00755 5206b0fd408fb81a93c42fe911e01a7d 189 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DA442_00755 5206b0fd408fb81a93c42fe911e01a7d 189 Gene3D G3DSA:3.90.79.10 7 189 9.5E-50 T 14-10-2018 DA442_00755 5206b0fd408fb81a93c42fe911e01a7d 189 SUPERFAMILY SSF55811 4 181 1.03E-40 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DA442_04080 ee34f11cdd92e348a294d92b9d3ca5dc 131 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 129 7.5E-28 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 DA442_04080 ee34f11cdd92e348a294d92b9d3ca5dc 131 PIRSF PIRSF002889 1 131 7.5E-32 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 DA442_16770 f4e212a48a3842c9634d5a22956f670a 808 PIRSF PIRSF500064 2 808 0.0 T 14-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 DA442_16770 f4e212a48a3842c9634d5a22956f670a 808 PIRSF PIRSF000437 19 808 0.0 T 14-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 DA442_16770 f4e212a48a3842c9634d5a22956f670a 808 SMART SM00563 300 427 1.2E-26 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DA442_16770 f4e212a48a3842c9634d5a22956f670a 808 Pfam PF01553 Acyltransferase 289 424 2.0E-23 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DA442_16770 f4e212a48a3842c9634d5a22956f670a 808 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 807 31.421 T 14-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 DA442_16770 f4e212a48a3842c9634d5a22956f670a 808 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 799 0.0 T 14-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 DA442_16770 f4e212a48a3842c9634d5a22956f670a 808 SUPERFAMILY SSF69593 241 490 2.09E-25 T 14-10-2018 DA442_13275 eb28587d09aa95260298ea829f091a51 379 Pfam PF02417 Chromate transporter 212 373 3.5E-34 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 DA442_13275 eb28587d09aa95260298ea829f091a51 379 Pfam PF02417 Chromate transporter 3 168 1.1E-33 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 DA442_13275 eb28587d09aa95260298ea829f091a51 379 PIRSF PIRSF004810 1 379 9.2E-115 T 14-10-2018 IPR014047 Chromate transporter, long chain DA442_13275 eb28587d09aa95260298ea829f091a51 379 TIGRFAM TIGR00937 2A51: chromate efflux transporter 8 369 7.4E-92 T 14-10-2018 IPR014047 Chromate transporter, long chain DA442_11985 499bc46742f8117a59dd31bc1bb29d2c 678 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 489 644 1.2E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_11985 499bc46742f8117a59dd31bc1bb29d2c 678 SUPERFAMILY SSF58104 378 677 3.01E-63 T 14-10-2018 DA442_11985 499bc46742f8117a59dd31bc1bb29d2c 678 SUPERFAMILY SSF103190 115 212 9.42E-13 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily DA442_11985 499bc46742f8117a59dd31bc1bb29d2c 678 Gene3D G3DSA:1.10.287.950 348 678 9.1E-67 T 14-10-2018 DA442_11985 499bc46742f8117a59dd31bc1bb29d2c 678 Pfam PF17201 Cache 3/Cache 2 fusion domain 40 324 5.4E-67 T 14-10-2018 IPR033462 Cache 3/Cache 2 fusion domain DA442_11985 499bc46742f8117a59dd31bc1bb29d2c 678 SMART SM00283 417 678 1.5E-66 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_11985 499bc46742f8117a59dd31bc1bb29d2c 678 Gene3D G3DSA:3.30.450.20 182 328 2.5E-12 T 14-10-2018 DA442_03085 17ce61746a1226e7f708a1f1a601ed17 239 PIRSF PIRSF004808 1 239 6.9E-72 T 14-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 DA442_03085 17ce61746a1226e7f708a1f1a601ed17 239 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 238 2.9E-84 T 14-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 DA442_03085 17ce61746a1226e7f708a1f1a601ed17 239 SUPERFAMILY SSF75217 5 175 7.19E-38 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases DA442_03085 17ce61746a1226e7f708a1f1a601ed17 239 Pfam PF00588 SpoU rRNA Methylase family 5 153 2.6E-35 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 DA442_03085 17ce61746a1226e7f708a1f1a601ed17 239 Gene3D G3DSA:3.40.1280.10 1 163 1.3E-62 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DA442_03085 17ce61746a1226e7f708a1f1a601ed17 239 Gene3D G3DSA:1.10.8.590 173 239 7.9E-29 T 14-10-2018 DA442_19840 f897912959055eff232bf0b8b19fec17 409 Gene3D G3DSA:2.40.37.10 45 404 1.4E-130 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DA442_19840 f897912959055eff232bf0b8b19fec17 409 SMART SM01005 280 408 6.2E-49 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DA442_19840 f897912959055eff232bf0b8b19fec17 409 Pfam PF01168 Alanine racemase, N-terminal domain 49 272 4.6E-48 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DA442_19840 f897912959055eff232bf0b8b19fec17 409 SUPERFAMILY SSF51419 49 283 1.19E-45 T 14-10-2018 IPR029066 PLP-binding barrel DA442_19840 f897912959055eff232bf0b8b19fec17 409 Hamap MF_01201 Alanine racemase. 42 408 26.271 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DA442_19840 f897912959055eff232bf0b8b19fec17 409 SUPERFAMILY SSF50621 272 408 2.65E-40 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DA442_19840 f897912959055eff232bf0b8b19fec17 409 Gene3D G3DSA:3.20.20.10 51 268 1.4E-130 T 14-10-2018 IPR029066 PLP-binding barrel DA442_19840 f897912959055eff232bf0b8b19fec17 409 PRINTS PR00992 Alanine racemase signature 334 351 5.3E-31 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DA442_19840 f897912959055eff232bf0b8b19fec17 409 PRINTS PR00992 Alanine racemase signature 68 84 5.3E-31 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DA442_19840 f897912959055eff232bf0b8b19fec17 409 PRINTS PR00992 Alanine racemase signature 104 122 5.3E-31 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DA442_19840 f897912959055eff232bf0b8b19fec17 409 PRINTS PR00992 Alanine racemase signature 202 213 5.3E-31 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DA442_19840 f897912959055eff232bf0b8b19fec17 409 PRINTS PR00992 Alanine racemase signature 166 178 5.3E-31 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DA442_19840 f897912959055eff232bf0b8b19fec17 409 PRINTS PR00992 Alanine racemase signature 245 272 5.3E-31 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DA442_19840 f897912959055eff232bf0b8b19fec17 409 PRINTS PR00992 Alanine racemase signature 313 328 5.3E-31 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DA442_19840 f897912959055eff232bf0b8b19fec17 409 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 73 83 - T 14-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DA442_19840 f897912959055eff232bf0b8b19fec17 409 TIGRFAM TIGR00492 alr: alanine racemase 45 408 5.9E-69 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DA442_19840 f897912959055eff232bf0b8b19fec17 409 Pfam PF00842 Alanine racemase, C-terminal domain 281 407 3.0E-32 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DA442_06740 6e9717e38b1de5fdc37bf42fd061fe53 193 Pfam PF07209 Protein of unknown function (DUF1415) 17 185 6.9E-66 T 14-10-2018 IPR009858 Protein of unknown function DUF1415 DA442_21250 2458c4f4da7395faf554d6d29bc6947e 551 Gene3D G3DSA:3.40.720.10 217 551 4.8E-85 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DA442_21250 2458c4f4da7395faf554d6d29bc6947e 551 SUPERFAMILY SSF53649 356 539 6.76E-16 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DA442_21250 2458c4f4da7395faf554d6d29bc6947e 551 Pfam PF00884 Sulfatase 242 532 2.0E-44 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 DA442_21250 2458c4f4da7395faf554d6d29bc6947e 551 Pfam PF08019 Domain of unknown function (DUF1705) 58 211 1.0E-51 T 14-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 DA442_06160 35dbf4ca5a288173dd5a342ae6adb0d8 327 SUPERFAMILY SSF52821 194 314 2.75E-28 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily DA442_06160 35dbf4ca5a288173dd5a342ae6adb0d8 327 ProSitePatterns PS00683 Rhodanese C-terminal signature. 298 308 - T 14-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 DA442_06160 35dbf4ca5a288173dd5a342ae6adb0d8 327 Gene3D G3DSA:3.40.250.10 193 321 1.4E-30 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily DA442_06160 35dbf4ca5a288173dd5a342ae6adb0d8 327 Pfam PF00581 Rhodanese-like domain 201 309 1.0E-12 T 14-10-2018 IPR001763 Rhodanese-like domain DA442_06160 35dbf4ca5a288173dd5a342ae6adb0d8 327 Pfam PF00581 Rhodanese-like domain 80 164 1.6E-8 T 14-10-2018 IPR001763 Rhodanese-like domain DA442_06160 35dbf4ca5a288173dd5a342ae6adb0d8 327 SMART SM00450 195 314 3.1E-17 T 14-10-2018 IPR001763 Rhodanese-like domain DA442_06160 35dbf4ca5a288173dd5a342ae6adb0d8 327 SMART SM00450 16 169 0.0031 T 14-10-2018 IPR001763 Rhodanese-like domain DA442_06160 35dbf4ca5a288173dd5a342ae6adb0d8 327 Gene3D G3DSA:3.40.250.10 34 187 3.1E-24 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily DA442_06160 35dbf4ca5a288173dd5a342ae6adb0d8 327 SUPERFAMILY SSF52821 45 181 2.62E-22 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily DA442_15175 70f431218be0d037238ebe9b0aabacbd 148 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain DA442_15175 70f431218be0d037238ebe9b0aabacbd 148 SUPERFAMILY SSF55804 1 145 3.92E-41 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DA442_15175 70f431218be0d037238ebe9b0aabacbd 148 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 2 145 8.1E-52 T 14-10-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 DA442_15175 70f431218be0d037238ebe9b0aabacbd 148 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 146 7.0E-38 T 14-10-2018 IPR002178 PTS EIIA type-2 domain DA442_15175 70f431218be0d037238ebe9b0aabacbd 148 Gene3D G3DSA:3.40.930.10 1 148 7.4E-53 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DA442_23820 45ced39af465a3dd5487e7c25052c98d 815 Gene3D G3DSA:3.40.228.10 178 643 1.8E-219 T 14-10-2018 DA442_23820 45ced39af465a3dd5487e7c25052c98d 815 Pfam PF01568 Molydopterin dinucleotide binding domain 675 791 1.7E-26 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 DA442_23820 45ced39af465a3dd5487e7c25052c98d 815 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 498 515 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 DA442_23820 45ced39af465a3dd5487e7c25052c98d 815 Gene3D G3DSA:3.40.50.740 86 566 1.8E-219 T 14-10-2018 DA442_23820 45ced39af465a3dd5487e7c25052c98d 815 Gene3D G3DSA:3.90.55.10 83 617 1.8E-219 T 14-10-2018 DA442_23820 45ced39af465a3dd5487e7c25052c98d 815 SUPERFAMILY SSF50692 670 813 2.03E-42 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily DA442_23820 45ced39af465a3dd5487e7c25052c98d 815 SUPERFAMILY SSF53706 47 667 9.29E-164 T 14-10-2018 DA442_23820 45ced39af465a3dd5487e7c25052c98d 815 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 5 31 2.5E-5 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DA442_23820 45ced39af465a3dd5487e7c25052c98d 815 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 43 813 0.0 T 14-10-2018 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 DA442_23820 45ced39af465a3dd5487e7c25052c98d 815 Pfam PF00384 Molybdopterin oxidoreductase 86 555 1.0E-103 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DA442_23820 45ced39af465a3dd5487e7c25052c98d 815 Gene3D G3DSA:2.40.40.20 651 809 9.3E-47 T 14-10-2018 DA442_07370 3947dbd85e60212654e95bdbb71b510a 293 SMART SM00062 32 279 7.1E-28 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DA442_07370 3947dbd85e60212654e95bdbb71b510a 293 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 33 278 3.0E-38 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DA442_07370 3947dbd85e60212654e95bdbb71b510a 293 SUPERFAMILY SSF53850 16 278 4.69E-40 T 14-10-2018 DA442_07370 3947dbd85e60212654e95bdbb71b510a 293 Gene3D G3DSA:3.40.190.10 29 278 3.2E-48 T 14-10-2018 DA442_07370 3947dbd85e60212654e95bdbb71b510a 293 Gene3D G3DSA:3.40.190.10 123 236 3.2E-48 T 14-10-2018 DA442_19050 43d6ca6d2caf1585f79205af28c40a17 434 Pfam PF00294 pfkB family carbohydrate kinase 138 300 2.1E-12 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB DA442_19050 43d6ca6d2caf1585f79205af28c40a17 434 SUPERFAMILY SSF53613 34 417 1.57E-46 T 14-10-2018 IPR029056 Ribokinase-like DA442_25860 be9277e5a957109d2542cf9f2a8450b7 387 SUPERFAMILY SSF49503 121 260 7.54E-54 T 14-10-2018 IPR008972 Cupredoxin DA442_25860 be9277e5a957109d2542cf9f2a8450b7 387 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 282 356 2.8E-11 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_25860 be9277e5a957109d2542cf9f2a8450b7 387 Gene3D G3DSA:1.10.760.10 263 387 7.3E-32 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_25860 be9277e5a957109d2542cf9f2a8450b7 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 85 97 8.7E-40 T 14-10-2018 DA442_25860 be9277e5a957109d2542cf9f2a8450b7 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 210 227 8.7E-40 T 14-10-2018 DA442_25860 be9277e5a957109d2542cf9f2a8450b7 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 97 117 8.7E-40 T 14-10-2018 DA442_25860 be9277e5a957109d2542cf9f2a8450b7 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 190 210 8.7E-40 T 14-10-2018 DA442_25860 be9277e5a957109d2542cf9f2a8450b7 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 119 138 8.7E-40 T 14-10-2018 DA442_25860 be9277e5a957109d2542cf9f2a8450b7 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 228 245 8.7E-40 T 14-10-2018 DA442_25860 be9277e5a957109d2542cf9f2a8450b7 387 PRINTS PR01166 Cytochrome c oxidase subunit II signature 166 187 8.7E-40 T 14-10-2018 DA442_25860 be9277e5a957109d2542cf9f2a8450b7 387 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 191 239 - T 14-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_25860 be9277e5a957109d2542cf9f2a8450b7 387 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 123 245 6.2E-36 T 14-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_25860 be9277e5a957109d2542cf9f2a8450b7 387 SUPERFAMILY SSF46626 225 367 1.95E-26 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_25860 be9277e5a957109d2542cf9f2a8450b7 387 Gene3D G3DSA:2.60.40.420 120 258 5.4E-54 T 14-10-2018 IPR008972 Cupredoxin DA442_25860 be9277e5a957109d2542cf9f2a8450b7 387 Gene3D G3DSA:1.10.287.90 25 119 1.4E-26 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_25860 be9277e5a957109d2542cf9f2a8450b7 387 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 28 108 7.7E-17 T 14-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_25860 be9277e5a957109d2542cf9f2a8450b7 387 SUPERFAMILY SSF81464 15 117 1.01E-28 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_25860 be9277e5a957109d2542cf9f2a8450b7 387 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 37 255 3.7E-61 T 14-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_01965 9f1c5e20b08c5d32fcd4953afab6edb1 650 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 550 566 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain DA442_01965 9f1c5e20b08c5d32fcd4953afab6edb1 650 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 9 345 8.1E-170 T 14-10-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197 DA442_01965 9f1c5e20b08c5d32fcd4953afab6edb1 650 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 386 467 5.2E-12 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DA442_01965 9f1c5e20b08c5d32fcd4953afab6edb1 650 Pfam PF02378 Phosphotransferase system, EIIC 18 278 6.5E-19 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DA442_01965 9f1c5e20b08c5d32fcd4953afab6edb1 650 SUPERFAMILY SSF55804 506 645 2.22E-40 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DA442_01965 9f1c5e20b08c5d32fcd4953afab6edb1 650 SUPERFAMILY SSF52794 385 472 3.49E-25 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DA442_01965 9f1c5e20b08c5d32fcd4953afab6edb1 650 Gene3D G3DSA:3.40.50.2300 373 476 3.5E-36 T 14-10-2018 DA442_01965 9f1c5e20b08c5d32fcd4953afab6edb1 650 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 507 644 1.0E-33 T 14-10-2018 IPR002178 PTS EIIA type-2 domain DA442_01965 9f1c5e20b08c5d32fcd4953afab6edb1 650 Gene3D G3DSA:3.40.930.10 502 647 3.9E-51 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DA442_18070 ef623b34ad859a6b5431ca596088e3dd 247 SMART SM00062 26 247 2.8E-75 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DA442_18070 ef623b34ad859a6b5431ca596088e3dd 247 Gene3D G3DSA:3.40.190.10 30 244 5.4E-77 T 14-10-2018 DA442_18070 ef623b34ad859a6b5431ca596088e3dd 247 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 247 5.0E-65 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DA442_18070 ef623b34ad859a6b5431ca596088e3dd 247 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 49 62 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site DA442_18070 ef623b34ad859a6b5431ca596088e3dd 247 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 4 245 5.8E-82 T 14-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 DA442_18070 ef623b34ad859a6b5431ca596088e3dd 247 SMART SM00079 26 247 0.0084 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 DA442_18070 ef623b34ad859a6b5431ca596088e3dd 247 Gene3D G3DSA:3.40.190.10 113 205 5.4E-77 T 14-10-2018 DA442_18070 ef623b34ad859a6b5431ca596088e3dd 247 SUPERFAMILY SSF53850 1 246 9.79E-69 T 14-10-2018 DA442_22390 00402eac47d6582dca7e74de345caffe 431 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 139 153 2.5E-8 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 DA442_22390 00402eac47d6582dca7e74de345caffe 431 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 52 60 2.5E-8 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 DA442_22390 00402eac47d6582dca7e74de345caffe 431 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 82 93 2.5E-8 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 DA442_22390 00402eac47d6582dca7e74de345caffe 431 Pfam PF00561 alpha/beta hydrolase fold 50 221 1.5E-21 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DA442_22390 00402eac47d6582dca7e74de345caffe 431 SUPERFAMILY SSF53474 41 420 3.59E-33 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_02235 817b5bdb89ce9db6e0bf271de9de5a39 147 PIRSF PIRSF006318 1 136 3.2E-57 T 14-10-2018 IPR009386 Protein of unknown function DUF1043 DA442_02235 817b5bdb89ce9db6e0bf271de9de5a39 147 Pfam PF06295 Protein of unknown function (DUF1043) 6 129 2.2E-47 T 14-10-2018 IPR009386 Protein of unknown function DUF1043 DA442_21490 0ac8e8d6dfde41985a76083d15aa95d5 304 SUPERFAMILY SSF52540 18 242 5.31E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_21490 0ac8e8d6dfde41985a76083d15aa95d5 304 Pfam PF10364 Putative capsular polysaccharide synthesis protein 121 257 4.6E-61 T 14-10-2018 IPR018831 Uncharacterised protein family NKWYS DA442_04435 c8c9e7215234c235a9c4811a2c2bca47 236 Gene3D G3DSA:1.10.1060.10 105 236 1.1E-55 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DA442_04435 c8c9e7215234c235a9c4811a2c2bca47 236 SUPERFAMILY SSF54292 1 104 3.07E-29 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DA442_04435 c8c9e7215234c235a9c4811a2c2bca47 236 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DA442_04435 c8c9e7215234c235a9c4811a2c2bca47 236 Pfam PF13534 4Fe-4S dicluster domain 146 219 1.5E-10 T 14-10-2018 DA442_04435 c8c9e7215234c235a9c4811a2c2bca47 236 SUPERFAMILY SSF46548 105 233 5.76E-40 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DA442_04435 c8c9e7215234c235a9c4811a2c2bca47 236 Gene3D G3DSA:3.10.20.30 1 104 5.0E-33 T 14-10-2018 IPR012675 Beta-grasp domain superfamily DA442_04435 c8c9e7215234c235a9c4811a2c2bca47 236 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 109 9.4E-30 T 14-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 DA442_04435 c8c9e7215234c235a9c4811a2c2bca47 236 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 8 228 1.3E-85 T 14-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 DA442_14120 b9891fc9add912516752add63c2d106e 822 Pfam PF00271 Helicase conserved C-terminal domain 206 326 6.9E-15 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_14120 b9891fc9add912516752add63c2d106e 822 Gene3D G3DSA:3.40.50.300 1 179 1.6E-51 T 14-10-2018 DA442_14120 b9891fc9add912516752add63c2d106e 822 Pfam PF08482 ATP-dependent helicase C-terminal 674 806 1.1E-52 T 14-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal DA442_14120 b9891fc9add912516752add63c2d106e 822 SMART SM00847 387 477 2.2E-8 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 DA442_14120 b9891fc9add912516752add63c2d106e 822 SMART SM00487 5 186 1.0E-13 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DA442_14120 b9891fc9add912516752add63c2d106e 822 SUPERFAMILY SSF52540 12 462 7.49E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_14120 b9891fc9add912516752add63c2d106e 822 SMART SM00490 226 327 1.3E-18 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_14120 b9891fc9add912516752add63c2d106e 822 Pfam PF00270 DEAD/DEAH box helicase 11 163 6.3E-10 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DA442_14120 b9891fc9add912516752add63c2d106e 822 Gene3D G3DSA:3.40.50.300 180 345 7.6E-52 T 14-10-2018 DA442_14120 b9891fc9add912516752add63c2d106e 822 PIRSF PIRSF005496 1 820 0.0 T 14-10-2018 DA442_14120 b9891fc9add912516752add63c2d106e 822 Gene3D G3DSA:1.20.120.1080 371 466 2.9E-7 T 14-10-2018 DA442_14120 b9891fc9add912516752add63c2d106e 822 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 818 0.0 T 14-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 DA442_14120 b9891fc9add912516752add63c2d106e 822 Pfam PF04408 Helicase associated domain (HA2) 388 447 7.8E-9 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 DA442_02410 82a53a00fca9b6c945861a83fece0b01 269 SUPERFAMILY SSF55347 127 236 1.87E-37 T 14-10-2018 DA442_02410 82a53a00fca9b6c945861a83fece0b01 269 Gene3D G3DSA:3.30.360.10 127 234 3.9E-101 T 14-10-2018 DA442_02410 82a53a00fca9b6c945861a83fece0b01 269 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 265 35.512 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DA442_02410 82a53a00fca9b6c945861a83fece0b01 269 SUPERFAMILY SSF51735 1 268 1.98E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_02410 82a53a00fca9b6c945861a83fece0b01 269 Gene3D G3DSA:3.40.50.720 3 264 3.9E-101 T 14-10-2018 DA442_02410 82a53a00fca9b6c945861a83fece0b01 269 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 265 4.8E-98 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DA442_02410 82a53a00fca9b6c945861a83fece0b01 269 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 128 264 6.9E-44 T 14-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DA442_02410 82a53a00fca9b6c945861a83fece0b01 269 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 150 167 - T 14-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DA442_02410 82a53a00fca9b6c945861a83fece0b01 269 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 125 2.7E-40 T 14-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DA442_02410 82a53a00fca9b6c945861a83fece0b01 269 PIRSF PIRSF000161 1 268 8.0E-89 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DA442_09005 9e99f8158c1773c899da9cf65fa043d3 626 SMART SM00100 17 134 2.2E-10 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain DA442_09005 9e99f8158c1773c899da9cf65fa043d3 626 Pfam PF00027 Cyclic nucleotide-binding domain 37 118 1.1E-12 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain DA442_09005 9e99f8158c1773c899da9cf65fa043d3 626 SUPERFAMILY SSF54631 146 278 1.77E-29 T 14-10-2018 DA442_09005 9e99f8158c1773c899da9cf65fa043d3 626 SMART SM00116 159 215 9.1E-5 T 14-10-2018 IPR000644 CBS domain DA442_09005 9e99f8158c1773c899da9cf65fa043d3 626 SMART SM00116 232 279 1.6E-4 T 14-10-2018 IPR000644 CBS domain DA442_09005 9e99f8158c1773c899da9cf65fa043d3 626 Gene3D G3DSA:2.60.120.10 1 141 8.2E-23 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DA442_09005 9e99f8158c1773c899da9cf65fa043d3 626 SUPERFAMILY SSF51206 7 135 8.25E-28 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like DA442_09005 9e99f8158c1773c899da9cf65fa043d3 626 Pfam PF00571 CBS domain 225 277 4.2E-11 T 14-10-2018 IPR000644 CBS domain DA442_09005 9e99f8158c1773c899da9cf65fa043d3 626 Pfam PF00571 CBS domain 153 211 7.1E-10 T 14-10-2018 IPR000644 CBS domain DA442_09005 9e99f8158c1773c899da9cf65fa043d3 626 Gene3D G3DSA:3.10.580.10 144 281 1.5E-34 T 14-10-2018 DA442_09005 9e99f8158c1773c899da9cf65fa043d3 626 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 478 621 2.6E-44 T 14-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding DA442_09005 9e99f8158c1773c899da9cf65fa043d3 626 Pfam PF03445 Putative nucleotidyltransferase DUF294 304 441 1.0E-48 T 14-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 DA442_07990 c76da0afb10797ab724c30cfca2b9f9c 159 SUPERFAMILY SSF54001 41 157 6.38E-40 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily DA442_07990 c76da0afb10797ab724c30cfca2b9f9c 159 Pfam PF00877 NlpC/P60 family 52 156 4.2E-31 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain DA442_07990 c76da0afb10797ab724c30cfca2b9f9c 159 Gene3D G3DSA:3.90.1720.10 38 158 1.1E-40 T 14-10-2018 DA442_18905 9b027bdeb1f80647cc3d0907b9d0e623 241 Gene3D G3DSA:1.10.357.10 2 200 1.0E-24 T 14-10-2018 DA442_18905 9b027bdeb1f80647cc3d0907b9d0e623 241 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 2.1E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DA442_18905 9b027bdeb1f80647cc3d0907b9d0e623 241 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 2.1E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DA442_18905 9b027bdeb1f80647cc3d0907b9d0e623 241 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 1.6E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DA442_18905 9b027bdeb1f80647cc3d0907b9d0e623 241 SUPERFAMILY SSF46689 9 86 2.21E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_11410 0c08e2bc8c4a1d1f7823dee69afb74c2 1024 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 3 1024 13.196 T 14-10-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_11410 0c08e2bc8c4a1d1f7823dee69afb74c2 1024 Pfam PF02811 PHP domain 8 99 5.6E-8 T 14-10-2018 IPR004013 PHP domain GO:0003824 DA442_11410 0c08e2bc8c4a1d1f7823dee69afb74c2 1024 SMART SM00481 4 73 8.4E-6 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal DA442_11410 0c08e2bc8c4a1d1f7823dee69afb74c2 1024 Pfam PF14579 Helix-hairpin-helix motif 768 855 1.6E-14 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_11410 0c08e2bc8c4a1d1f7823dee69afb74c2 1024 Pfam PF01336 OB-fold nucleic acid binding domain 934 1004 2.8E-9 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 DA442_11410 0c08e2bc8c4a1d1f7823dee69afb74c2 1024 Gene3D G3DSA:3.20.20.140 1 247 1.9E-36 T 14-10-2018 DA442_11410 0c08e2bc8c4a1d1f7823dee69afb74c2 1024 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 4 969 7.7E-156 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_11410 0c08e2bc8c4a1d1f7823dee69afb74c2 1024 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 270 694 2.0E-149 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_11410 0c08e2bc8c4a1d1f7823dee69afb74c2 1024 Gene3D G3DSA:2.40.50.140 917 1006 5.1E-5 T 14-10-2018 DA442_01210 cc3f98b0a3d1c57fb30f59eaee41c270 126 SUPERFAMILY SSF56784 2 113 6.87E-26 T 14-10-2018 IPR036412 HAD-like superfamily DA442_01210 cc3f98b0a3d1c57fb30f59eaee41c270 126 Pfam PF08282 haloacid dehalogenase-like hydrolase 4 70 7.2E-7 T 14-10-2018 DA442_01210 cc3f98b0a3d1c57fb30f59eaee41c270 126 TIGRFAM TIGR01681 HAD-SF-IIIC: HAD phosphatase, family IIIC 4 107 2.2E-9 T 14-10-2018 IPR010033 HAD-superfamily phosphatase, subfamily IIIC DA442_01210 cc3f98b0a3d1c57fb30f59eaee41c270 126 Gene3D G3DSA:3.40.50.1000 1 126 3.8E-44 T 14-10-2018 IPR023214 HAD superfamily DA442_01210 cc3f98b0a3d1c57fb30f59eaee41c270 126 TIGRFAM TIGR01689 EcbF-BcbF: capsule biosynthesis phosphatase 1 125 6.0E-67 T 14-10-2018 IPR010039 Capsule biosynthesis phosphatase DA442_23105 44c86bbf482ba6586f3a74d0e471a1f1 637 Gene3D G3DSA:3.30.1040.50 102 151 6.9E-18 T 14-10-2018 DA442_23105 44c86bbf482ba6586f3a74d0e471a1f1 637 Pfam PF00990 Diguanylate cyclase, GGDEF domain 237 386 2.5E-13 T 14-10-2018 IPR000160 GGDEF domain DA442_23105 44c86bbf482ba6586f3a74d0e471a1f1 637 SMART SM00267 226 392 3.1E-13 T 14-10-2018 IPR000160 GGDEF domain DA442_23105 44c86bbf482ba6586f3a74d0e471a1f1 637 Pfam PF16448 LapD/MoxY periplasmic domain 23 146 2.7E-39 T 14-10-2018 IPR032244 LapD/MoxY, periplasmic domain DA442_23105 44c86bbf482ba6586f3a74d0e471a1f1 637 Gene3D G3DSA:3.20.20.450 401 636 1.5E-40 T 14-10-2018 IPR035919 EAL domain superfamily DA442_23105 44c86bbf482ba6586f3a74d0e471a1f1 637 Gene3D G3DSA:3.30.70.270 223 391 3.4E-21 T 14-10-2018 DA442_23105 44c86bbf482ba6586f3a74d0e471a1f1 637 SUPERFAMILY SSF55073 243 390 7.45E-18 T 14-10-2018 IPR029787 Nucleotide cyclase DA442_23105 44c86bbf482ba6586f3a74d0e471a1f1 637 SMART SM00052 403 635 1.9E-10 T 14-10-2018 IPR001633 EAL domain DA442_23105 44c86bbf482ba6586f3a74d0e471a1f1 637 SUPERFAMILY SSF141868 411 636 2.22E-41 T 14-10-2018 IPR035919 EAL domain superfamily DA442_23105 44c86bbf482ba6586f3a74d0e471a1f1 637 Pfam PF00563 EAL domain 411 635 9.3E-40 T 14-10-2018 IPR001633 EAL domain DA442_06750 ba6b54e0b4183c8c07652b4ac772b4e3 289 Gene3D G3DSA:1.10.10.10 1 83 6.4E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_06750 ba6b54e0b4183c8c07652b4ac772b4e3 289 Pfam PF03466 LysR substrate binding domain 89 287 8.2E-45 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_06750 ba6b54e0b4183c8c07652b4ac772b4e3 289 SUPERFAMILY SSF53850 90 288 2.84E-42 T 14-10-2018 DA442_06750 ba6b54e0b4183c8c07652b4ac772b4e3 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 5.1E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_06750 ba6b54e0b4183c8c07652b4ac772b4e3 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_06750 ba6b54e0b4183c8c07652b4ac772b4e3 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_06750 ba6b54e0b4183c8c07652b4ac772b4e3 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_06750 ba6b54e0b4183c8c07652b4ac772b4e3 289 SUPERFAMILY SSF46785 1 85 3.86E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_06750 ba6b54e0b4183c8c07652b4ac772b4e3 289 Gene3D G3DSA:3.40.190.290 90 289 4.8E-48 T 14-10-2018 DA442_11030 7588627d464d650d65f264e146b50b9a 481 Gene3D G3DSA:3.20.20.70 283 475 1.3E-177 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_11030 7588627d464d650d65f264e146b50b9a 481 SUPERFAMILY SSF51366 284 479 6.91E-54 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DA442_11030 7588627d464d650d65f264e146b50b9a 481 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 284 475 1.1E-60 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 DA442_11030 7588627d464d650d65f264e146b50b9a 481 Pfam PF00218 Indole-3-glycerol phosphate synthase 29 278 1.5E-98 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 DA442_11030 7588627d464d650d65f264e146b50b9a 481 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 282 481 30.337 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 DA442_11030 7588627d464d650d65f264e146b50b9a 481 Gene3D G3DSA:3.20.20.70 32 282 1.3E-177 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_11030 7588627d464d650d65f264e146b50b9a 481 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 27 281 35.876 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 DA442_11030 7588627d464d650d65f264e146b50b9a 481 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 74 92 - T 14-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 DA442_11030 7588627d464d650d65f264e146b50b9a 481 SUPERFAMILY SSF51366 25 278 9.18E-83 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DA442_14415 84478de520e13c85d4054d4cf84fd9d1 65 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 58 4.4E-30 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 DA442_14415 84478de520e13c85d4054d4cf84fd9d1 65 Gene3D G3DSA:3.30.70.1680 1 59 8.5E-30 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 DA442_14415 84478de520e13c85d4054d4cf84fd9d1 65 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 4.0E-20 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 DA442_14415 84478de520e13c85d4054d4cf84fd9d1 65 SUPERFAMILY SSF117130 1 54 6.93E-21 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 DA442_14415 84478de520e13c85d4054d4cf84fd9d1 65 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 63 17.074 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 DA442_14415 84478de520e13c85d4054d4cf84fd9d1 65 Pfam PF02599 Global regulator protein family 1 52 2.0E-26 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 DA442_18000 58630b441a1dceb1863c12c42726a7fd 300 SUPERFAMILY SSF51735 3 167 1.97E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_18000 58630b441a1dceb1863c12c42726a7fd 300 SUPERFAMILY SSF48179 168 298 7.25E-40 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DA442_18000 58630b441a1dceb1863c12c42726a7fd 300 Gene3D G3DSA:1.10.1040.10 169 300 6.2E-43 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DA442_18000 58630b441a1dceb1863c12c42726a7fd 300 Gene3D G3DSA:3.40.50.720 1 167 3.2E-52 T 14-10-2018 DA442_18000 58630b441a1dceb1863c12c42726a7fd 300 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 297 3.5E-120 T 14-10-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 DA442_18000 58630b441a1dceb1863c12c42726a7fd 300 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 169 295 7.5E-30 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 DA442_18000 58630b441a1dceb1863c12c42726a7fd 300 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 166 1.2E-50 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 DA442_18000 58630b441a1dceb1863c12c42726a7fd 300 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 14-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 DA442_18000 58630b441a1dceb1863c12c42726a7fd 300 PIRSF PIRSF000103 1 300 1.3E-77 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 DA442_22115 61052bdbe969a3816cd448be31b7bd10 339 Gene3D G3DSA:1.10.220.30 6 91 1.6E-17 T 14-10-2018 DA442_22115 61052bdbe969a3816cd448be31b7bd10 339 Pfam PF14842 FliG N-terminal domain 12 109 1.2E-22 T 14-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain DA442_22115 61052bdbe969a3816cd448be31b7bd10 339 SUPERFAMILY SSF48029 122 330 1.44E-53 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical DA442_22115 61052bdbe969a3816cd448be31b7bd10 339 SUPERFAMILY SSF48029 13 114 1.7E-17 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical DA442_22115 61052bdbe969a3816cd448be31b7bd10 339 Gene3D G3DSA:1.10.220.30 96 199 8.0E-23 T 14-10-2018 DA442_22115 61052bdbe969a3816cd448be31b7bd10 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 12 28 5.6E-28 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DA442_22115 61052bdbe969a3816cd448be31b7bd10 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 121 144 5.6E-28 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DA442_22115 61052bdbe969a3816cd448be31b7bd10 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 254 274 5.6E-28 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DA442_22115 61052bdbe969a3816cd448be31b7bd10 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 278 304 5.6E-28 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DA442_22115 61052bdbe969a3816cd448be31b7bd10 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 232 252 5.6E-28 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DA442_22115 61052bdbe969a3816cd448be31b7bd10 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 41 67 5.6E-28 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DA442_22115 61052bdbe969a3816cd448be31b7bd10 339 Pfam PF01706 FliG C-terminal domain 224 330 1.5E-24 T 14-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal DA442_22115 61052bdbe969a3816cd448be31b7bd10 339 Gene3D G3DSA:1.10.220.30 202 335 8.4E-25 T 14-10-2018 DA442_22115 61052bdbe969a3816cd448be31b7bd10 339 Pfam PF14841 FliG middle domain 123 196 2.4E-20 T 14-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain DA442_18360 20819d41644aae287f09ef6e28818edc 327 Pfam PF12710 haloacid dehalogenase-like hydrolase 64 268 4.1E-16 T 14-10-2018 DA442_18360 20819d41644aae287f09ef6e28818edc 327 Gene3D G3DSA:3.40.50.1000 122 315 3.3E-38 T 14-10-2018 IPR023214 HAD superfamily DA442_18360 20819d41644aae287f09ef6e28818edc 327 SUPERFAMILY SSF56784 62 308 4.99E-24 T 14-10-2018 IPR036412 HAD-like superfamily DA442_05170 48c188bf134c8d1e161ff16915f08dab 644 SMART SM00763 19 380 1.6E-220 T 14-10-2018 IPR013153 PrkA AAA domain DA442_05170 48c188bf134c8d1e161ff16915f08dab 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 1.9E-72 T 14-10-2018 IPR010650 PrkA C-terminal domain DA442_05170 48c188bf134c8d1e161ff16915f08dab 644 SUPERFAMILY SSF52540 73 368 7.0E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_05170 48c188bf134c8d1e161ff16915f08dab 644 Pfam PF08298 PrkA AAA domain 19 380 1.5E-176 T 14-10-2018 IPR013153 PrkA AAA domain DA442_05170 48c188bf134c8d1e161ff16915f08dab 644 PIRSF PIRSF000549 1 644 8.6E-290 T 14-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 DA442_24650 818d3e95ed1f20ece7f2887ac50980d8 323 Gene3D G3DSA:2.70.240.10 37 323 1.9E-13 T 14-10-2018 DA442_24650 818d3e95ed1f20ece7f2887ac50980d8 323 SUPERFAMILY SSF56959 23 321 1.96E-67 T 14-10-2018 IPR036435 Leukocidin/porin MspA superfamily DA442_24650 818d3e95ed1f20ece7f2887ac50980d8 323 Pfam PF07968 Leukocidin/Hemolysin toxin family 74 316 6.2E-9 T 14-10-2018 IPR016183 Leukocidin/Hemolysin toxin GO:0005576|GO:0051715 DA442_12550 41234bec62ed178af86593e73e63c1d1 233 SUPERFAMILY SSF55166 19 175 3.14E-19 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 DA442_12550 41234bec62ed178af86593e73e63c1d1 233 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 25 178 5.5E-37 T 14-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 DA442_12550 41234bec62ed178af86593e73e63c1d1 233 Gene3D G3DSA:3.30.1380.10 3 197 1.8E-33 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 DA442_23180 185d2ce139f4647c15cb33f39b137f50 683 Gene3D G3DSA:3.40.50.11040 13 187 1.7E-19 T 14-10-2018 DA442_23180 185d2ce139f4647c15cb33f39b137f50 683 Pfam PF13718 GNAT acetyltransferase 2 388 501 1.3E-18 T 14-10-2018 IPR000182 GNAT domain DA442_23180 185d2ce139f4647c15cb33f39b137f50 683 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 29 681 40.789 T 14-10-2018 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 DA442_23180 185d2ce139f4647c15cb33f39b137f50 683 SUPERFAMILY SSF52540 162 297 1.24E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_23180 185d2ce139f4647c15cb33f39b137f50 683 Gene3D G3DSA:3.40.630.30 347 550 5.9E-66 T 14-10-2018 DA442_23180 185d2ce139f4647c15cb33f39b137f50 683 Pfam PF05127 Helicase 186 353 2.1E-58 T 14-10-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 DA442_23180 185d2ce139f4647c15cb33f39b137f50 683 SUPERFAMILY SSF55729 383 550 1.38E-11 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_23180 185d2ce139f4647c15cb33f39b137f50 683 Gene3D G3DSA:3.40.50.12320 188 343 4.3E-47 T 14-10-2018 DA442_23180 185d2ce139f4647c15cb33f39b137f50 683 Pfam PF08351 Domain of unknown function (DUF1726) 77 123 1.0E-5 T 14-10-2018 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal Reactome: R-HSA-6790901 DA442_23155 f0f2e9adb42a26cf3b85c1a2bd7b8a2a 351 Gene3D G3DSA:2.40.160.10 21 350 1.4E-33 T 14-10-2018 IPR023614 Porin domain superfamily DA442_23155 f0f2e9adb42a26cf3b85c1a2bd7b8a2a 351 SUPERFAMILY SSF56935 25 349 3.14E-40 T 14-10-2018 DA442_15750 9081e59462f72eac2b3f3fca1742ca53 91 Pfam PF04077 DsrH like protein 10 86 2.3E-23 T 14-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 DA442_15750 9081e59462f72eac2b3f3fca1742ca53 91 SUPERFAMILY SSF75169 1 90 1.77E-23 T 14-10-2018 IPR027396 DsrEFH-like DA442_15750 9081e59462f72eac2b3f3fca1742ca53 91 Gene3D G3DSA:3.40.1260.10 1 90 3.6E-26 T 14-10-2018 IPR027396 DsrEFH-like DA442_15750 9081e59462f72eac2b3f3fca1742ca53 91 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 90 4.4E-27 T 14-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 DA442_07865 98b36d2c7950aade62554bcb73539b52 357 Gene3D G3DSA:3.40.50.2000 166 338 1.6E-64 T 14-10-2018 DA442_07865 98b36d2c7950aade62554bcb73539b52 357 SUPERFAMILY SSF53756 2 350 6.28E-71 T 14-10-2018 DA442_07865 98b36d2c7950aade62554bcb73539b52 357 Pfam PF00534 Glycosyl transferases group 1 175 326 1.2E-35 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 DA442_07865 98b36d2c7950aade62554bcb73539b52 357 Gene3D G3DSA:3.40.50.2000 25 349 1.6E-64 T 14-10-2018 DA442_07865 98b36d2c7950aade62554bcb73539b52 357 Pfam PF13439 Glycosyltransferase Family 4 11 169 7.2E-20 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DA442_23430 49f5e23943befae9949b393c13d26253 202 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 11 186 1.3E-31 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT DA442_23540 7152e3e33fdcf38bd379d70c4bb7e5c6 382 SUPERFAMILY SSF51735 171 345 1.71E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_23540 7152e3e33fdcf38bd379d70c4bb7e5c6 382 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 39 165 9.3E-26 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DA442_23540 7152e3e33fdcf38bd379d70c4bb7e5c6 382 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 13 380 4.2E-230 T 14-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 DA442_23540 7152e3e33fdcf38bd379d70c4bb7e5c6 382 Gene3D G3DSA:3.90.180.10 17 375 2.6E-153 T 14-10-2018 DA442_23540 7152e3e33fdcf38bd379d70c4bb7e5c6 382 Pfam PF00107 Zinc-binding dehydrogenase 208 337 5.1E-27 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DA442_23540 7152e3e33fdcf38bd379d70c4bb7e5c6 382 SUPERFAMILY SSF50129 329 379 1.41E-11 T 14-10-2018 IPR011032 GroES-like superfamily DA442_23540 7152e3e33fdcf38bd379d70c4bb7e5c6 382 Gene3D G3DSA:3.40.50.720 185 323 2.6E-153 T 14-10-2018 DA442_23540 7152e3e33fdcf38bd379d70c4bb7e5c6 382 SMART SM00829 23 378 0.0011 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DA442_23540 7152e3e33fdcf38bd379d70c4bb7e5c6 382 SUPERFAMILY SSF50129 10 196 4.42E-72 T 14-10-2018 IPR011032 GroES-like superfamily DA442_23540 7152e3e33fdcf38bd379d70c4bb7e5c6 382 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 72 86 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DA442_11605 16c1db47ed342c3b28bba00c4e700ba3 279 SUPERFAMILY SSF46785 12 74 9.45E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_11605 16c1db47ed342c3b28bba00c4e700ba3 279 Pfam PF07840 FadR C-terminal domain 72 274 3.8E-70 T 14-10-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 DA442_11605 16c1db47ed342c3b28bba00c4e700ba3 279 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 279 138.354 T 14-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 DA442_11605 16c1db47ed342c3b28bba00c4e700ba3 279 SUPERFAMILY SSF48008 79 270 8.63E-57 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DA442_11605 16c1db47ed342c3b28bba00c4e700ba3 279 Gene3D G3DSA:1.20.120.530 80 149 3.1E-7 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DA442_11605 16c1db47ed342c3b28bba00c4e700ba3 279 Gene3D G3DSA:1.20.120.530 153 279 2.7E-26 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DA442_11605 16c1db47ed342c3b28bba00c4e700ba3 279 Gene3D G3DSA:1.10.10.10 1 79 1.3E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_11605 16c1db47ed342c3b28bba00c4e700ba3 279 SMART SM00345 12 71 1.6E-22 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_11605 16c1db47ed342c3b28bba00c4e700ba3 279 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 71 3.1E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_11605 16c1db47ed342c3b28bba00c4e700ba3 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 3.5E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_11605 16c1db47ed342c3b28bba00c4e700ba3 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 3.5E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_11605 16c1db47ed342c3b28bba00c4e700ba3 279 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 276 3.8E-115 T 14-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 DA442_15240 0c487d547e961cbdb978d55f2983855d 273 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 149 169 - T 14-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site DA442_15240 0c487d547e961cbdb978d55f2983855d 273 Gene3D G3DSA:3.60.110.10 1 268 1.1E-89 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DA442_15240 0c487d547e961cbdb978d55f2983855d 273 Pfam PF00795 Carbon-nitrogen hydrolase 3 256 1.2E-54 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 DA442_15240 0c487d547e961cbdb978d55f2983855d 273 SUPERFAMILY SSF56317 3 263 1.11E-80 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DA442_06255 af44af69d0a19b8461d6b18da42f48fe 326 Gene3D G3DSA:3.90.10.10 199 294 2.2E-7 T 14-10-2018 DA442_06255 af44af69d0a19b8461d6b18da42f48fe 326 Gene3D G3DSA:1.10.1130.10 32 168 3.5E-7 T 14-10-2018 DA442_06255 af44af69d0a19b8461d6b18da42f48fe 326 SUPERFAMILY SSF48695 61 310 6.47E-50 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily DA442_06255 af44af69d0a19b8461d6b18da42f48fe 326 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 251 286 9.6E-12 T 14-10-2018 IPR010177 Doubled CXXCH motif DA442_06255 af44af69d0a19b8461d6b18da42f48fe 326 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 90 147 4.0E-7 T 14-10-2018 IPR010177 Doubled CXXCH motif DA442_06255 af44af69d0a19b8461d6b18da42f48fe 326 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 204 244 7.6E-11 T 14-10-2018 IPR010177 Doubled CXXCH motif DA442_06255 af44af69d0a19b8461d6b18da42f48fe 326 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 161 193 2.8E-5 T 14-10-2018 IPR010177 Doubled CXXCH motif DA442_06255 af44af69d0a19b8461d6b18da42f48fe 326 TIGRFAM TIGR01905 paired_CXXCH_1: doubled CXXCH domain 251 286 2.7E-11 T 14-10-2018 IPR010177 Doubled CXXCH motif DA442_06255 af44af69d0a19b8461d6b18da42f48fe 326 TIGRFAM TIGR01905 paired_CXXCH_1: doubled CXXCH domain 211 243 5.6E-7 T 14-10-2018 IPR010177 Doubled CXXCH motif DA442_06255 af44af69d0a19b8461d6b18da42f48fe 326 TIGRFAM TIGR03508 decahem_SO: decaheme c-type cytochrome, DmsE family 59 319 1.6E-99 T 14-10-2018 IPR020015 Decaheme cytochrome, c-type, DmsE DA442_02790 eddc0afaff36cf4baa62b791f869dceb 323 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 2 282 1.1E-84 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 DA442_02790 eddc0afaff36cf4baa62b791f869dceb 323 SUPERFAMILY SSF51445 1 282 2.74E-85 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DA442_02790 eddc0afaff36cf4baa62b791f869dceb 323 Gene3D G3DSA:3.20.20.300 1 323 4.0E-124 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 DA442_02790 eddc0afaff36cf4baa62b791f869dceb 323 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 225 242 - T 14-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 DA442_19620 e61ea6ffcee38d799055e474892e7b98 276 Gene3D G3DSA:3.40.140.10 133 275 1.0E-37 T 14-10-2018 DA442_19620 e61ea6ffcee38d799055e474892e7b98 276 PIRSF PIRSF015626 20 276 4.2E-65 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 DA442_19620 e61ea6ffcee38d799055e474892e7b98 276 SUPERFAMILY SSF53927 36 274 7.22E-66 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 DA442_19620 e61ea6ffcee38d799055e474892e7b98 276 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 18 276 25.202 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 DA442_19620 e61ea6ffcee38d799055e474892e7b98 276 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 39 272 1.9E-45 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 DA442_19620 e61ea6ffcee38d799055e474892e7b98 276 Gene3D G3DSA:3.10.20.10 43 128 3.9E-8 T 14-10-2018 DA442_19620 e61ea6ffcee38d799055e474892e7b98 276 Pfam PF02634 FdhD/NarQ family 42 273 1.2E-61 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 DA442_17400 9898a1c44ef62dd9feba88a18c86ec3b 507 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 493 2.7E-29 T 14-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain DA442_17400 9898a1c44ef62dd9feba88a18c86ec3b 507 Gene3D G3DSA:3.30.230.10 1 166 6.8E-7 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DA442_17400 9898a1c44ef62dd9feba88a18c86ec3b 507 SMART SM00382 210 390 4.3E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_17400 9898a1c44ef62dd9feba88a18c86ec3b 507 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 2.6E-48 T 14-10-2018 DA442_17400 9898a1c44ef62dd9feba88a18c86ec3b 507 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 391 1.2E-89 T 14-10-2018 IPR000523 Magnesium chelatase ChlI domain DA442_17400 9898a1c44ef62dd9feba88a18c86ec3b 507 Gene3D G3DSA:3.40.50.300 191 499 1.1E-55 T 14-10-2018 DA442_17400 9898a1c44ef62dd9feba88a18c86ec3b 507 SUPERFAMILY SSF54211 2 169 1.67E-31 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DA442_17400 9898a1c44ef62dd9feba88a18c86ec3b 507 SUPERFAMILY SSF52540 188 501 3.52E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_17400 9898a1c44ef62dd9feba88a18c86ec3b 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 289 303 7.6E-5 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 DA442_17400 9898a1c44ef62dd9feba88a18c86ec3b 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 7.6E-5 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 DA442_17400 9898a1c44ef62dd9feba88a18c86ec3b 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 317 330 7.6E-5 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 DA442_17400 9898a1c44ef62dd9feba88a18c86ec3b 507 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 493 8.5E-210 T 14-10-2018 IPR004482 Mg chelatase-related protein DA442_06565 89b49e8e44e0418059f70d0903072f56 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 220 7.7E-14 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DA442_06565 89b49e8e44e0418059f70d0903072f56 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 319 530 3.7E-49 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DA442_06565 89b49e8e44e0418059f70d0903072f56 642 SMART SM00863 171 220 5.1E-19 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DA442_06565 89b49e8e44e0418059f70d0903072f56 642 Gene3D G3DSA:3.30.930.10 224 532 7.0E-129 T 14-10-2018 DA442_06565 89b49e8e44e0418059f70d0903072f56 642 Gene3D G3DSA:3.10.20.30 3 62 1.1E-22 T 14-10-2018 IPR012675 Beta-grasp domain superfamily DA442_06565 89b49e8e44e0418059f70d0903072f56 642 SUPERFAMILY SSF55681 244 527 6.77E-99 T 14-10-2018 DA442_06565 89b49e8e44e0418059f70d0903072f56 642 Gene3D G3DSA:3.30.980.10 70 223 6.2E-64 T 14-10-2018 DA442_06565 89b49e8e44e0418059f70d0903072f56 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 67 635 34.071 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DA442_06565 89b49e8e44e0418059f70d0903072f56 642 SUPERFAMILY SSF81271 3 61 2.29E-15 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 DA442_06565 89b49e8e44e0418059f70d0903072f56 642 Pfam PF02824 TGS domain 4 61 9.8E-12 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 DA442_06565 89b49e8e44e0418059f70d0903072f56 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 1.1E-53 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DA442_06565 89b49e8e44e0418059f70d0903072f56 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 465 493 1.1E-53 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DA442_06565 89b49e8e44e0418059f70d0903072f56 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 535 547 1.1E-53 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DA442_06565 89b49e8e44e0418059f70d0903072f56 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 1.1E-53 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DA442_06565 89b49e8e44e0418059f70d0903072f56 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 508 521 1.1E-53 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DA442_06565 89b49e8e44e0418059f70d0903072f56 642 Gene3D G3DSA:3.30.54.20 131 188 6.2E-64 T 14-10-2018 DA442_06565 89b49e8e44e0418059f70d0903072f56 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 73 632 3.9E-241 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DA442_06565 89b49e8e44e0418059f70d0903072f56 642 Pfam PF03129 Anticodon binding domain 542 631 1.9E-21 T 14-10-2018 IPR004154 Anticodon-binding DA442_06565 89b49e8e44e0418059f70d0903072f56 642 Gene3D G3DSA:3.40.50.800 533 642 8.3E-31 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily DA442_06565 89b49e8e44e0418059f70d0903072f56 642 SUPERFAMILY SSF55186 65 242 4.84E-65 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 DA442_06565 89b49e8e44e0418059f70d0903072f56 642 SUPERFAMILY SSF52954 530 638 1.24E-31 T 14-10-2018 DA442_15200 6b3a7a95985b3c88d9b168f4d18e970f 175 PIRSF PIRSF016183 1 174 2.5E-72 T 14-10-2018 IPR006839 Ribosome-associated, YjgA DA442_15200 6b3a7a95985b3c88d9b168f4d18e970f 175 SUPERFAMILY SSF158710 28 170 1.31E-51 T 14-10-2018 IPR023153 PSPTO4464-like domain superfamily DA442_15200 6b3a7a95985b3c88d9b168f4d18e970f 175 Pfam PF04751 Protein of unknown function (DUF615) 18 168 3.1E-56 T 14-10-2018 IPR006839 Ribosome-associated, YjgA DA442_15200 6b3a7a95985b3c88d9b168f4d18e970f 175 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 10 172 23.06 T 14-10-2018 IPR006839 Ribosome-associated, YjgA DA442_15200 6b3a7a95985b3c88d9b168f4d18e970f 175 Gene3D G3DSA:1.10.60.30 103 175 5.6E-24 T 14-10-2018 DA442_15200 6b3a7a95985b3c88d9b168f4d18e970f 175 Gene3D G3DSA:1.10.60.30 28 102 2.8E-26 T 14-10-2018 DA442_23250 dfbf92a253a3db48427c95bc02deea93 238 Gene3D G3DSA:3.30.70.980 131 202 1.2E-44 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_23250 dfbf92a253a3db48427c95bc02deea93 238 Pfam PF01709 Transcriptional regulator 5 236 1.1E-70 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_23250 dfbf92a253a3db48427c95bc02deea93 238 Gene3D G3DSA:3.30.70.980 83 235 1.2E-44 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_23250 dfbf92a253a3db48427c95bc02deea93 238 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 238 26.888 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_23250 dfbf92a253a3db48427c95bc02deea93 238 Gene3D G3DSA:1.10.10.200 17 78 6.4E-17 T 14-10-2018 IPR017856 Integrase-like, N-terminal DA442_23250 dfbf92a253a3db48427c95bc02deea93 238 SUPERFAMILY SSF75625 1 237 9.81E-75 T 14-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_01375 c011b8d809b8e40b8a9fc531848f828d 170 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 47.96 T 14-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 DA442_01375 c011b8d809b8e40b8a9fc531848f828d 170 Gene3D G3DSA:3.50.30.40 1 161 3.7E-61 T 14-10-2018 DA442_01375 c011b8d809b8e40b8a9fc531848f828d 170 SUPERFAMILY SSF89562 2 158 2.75E-47 T 14-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily DA442_01375 c011b8d809b8e40b8a9fc531848f828d 170 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 160 9.3E-83 T 14-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 DA442_01375 c011b8d809b8e40b8a9fc531848f828d 170 Pfam PF03737 Aldolase/RraA 6 152 2.2E-39 T 14-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein DA442_01375 c011b8d809b8e40b8a9fc531848f828d 170 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 1.5E-68 T 14-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 DA442_08515 97e2f99ad01f132aef756fbb9433c398 418 SUPERFAMILY SSF53335 99 414 2.34E-70 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_08515 97e2f99ad01f132aef756fbb9433c398 418 Gene3D G3DSA:2.30.130.10 22 93 1.4E-28 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 DA442_08515 97e2f99ad01f132aef756fbb9433c398 418 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 22 418 68.589 T 14-10-2018 IPR023542 rRNA large subunit methyltransferase I GO:0008649 DA442_08515 97e2f99ad01f132aef756fbb9433c398 418 SMART SM00359 24 108 1.2E-13 T 14-10-2018 IPR002478 PUA domain GO:0003723 DA442_08515 97e2f99ad01f132aef756fbb9433c398 418 Gene3D G3DSA:3.40.50.150 202 417 9.1E-70 T 14-10-2018 DA442_08515 97e2f99ad01f132aef756fbb9433c398 418 SUPERFAMILY SSF88697 25 94 4.05E-17 T 14-10-2018 IPR015947 PUA-like superfamily DA442_08515 97e2f99ad01f132aef756fbb9433c398 418 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 189 397 7.6E-31 T 14-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 DA442_08515 97e2f99ad01f132aef756fbb9433c398 418 Gene3D G3DSA:3.30.750.80 94 201 1.1E-36 T 14-10-2018 DA442_10820 5052916b11808dee662ab9d7085d44be 198 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 3 198 38.928 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DA442_10820 5052916b11808dee662ab9d7085d44be 198 Pfam PF00925 GTP cyclohydrolase II 19 171 1.4E-60 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DA442_10820 5052916b11808dee662ab9d7085d44be 198 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 23 194 1.5E-62 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DA442_10820 5052916b11808dee662ab9d7085d44be 198 SUPERFAMILY SSF142695 19 172 6.8E-56 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DA442_10820 5052916b11808dee662ab9d7085d44be 198 Gene3D G3DSA:3.40.50.10990 5 174 2.2E-65 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DA442_24760 60453e6c3fb07b7ffea2851fec6aeae9 155 Gene3D G3DSA:1.25.40.20 19 155 1.7E-25 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily DA442_24760 60453e6c3fb07b7ffea2851fec6aeae9 155 Pfam PF12796 Ankyrin repeats (3 copies) 40 129 1.0E-11 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain DA442_24760 60453e6c3fb07b7ffea2851fec6aeae9 155 SUPERFAMILY SSF48403 35 153 5.44E-26 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily DA442_24760 60453e6c3fb07b7ffea2851fec6aeae9 155 SMART SM00248 66 95 0.0012 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 DA442_24760 60453e6c3fb07b7ffea2851fec6aeae9 155 SMART SM00248 99 128 390.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 DA442_24760 60453e6c3fb07b7ffea2851fec6aeae9 155 SMART SM00248 33 62 1900.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 DA442_03595 dcaab10e233d01de406d6ba6eab35d87 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 129 1.8E-48 T 14-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 DA442_03595 dcaab10e233d01de406d6ba6eab35d87 281 TIGRFAM TIGR03138 QueF: queuine synthase 11 281 5.7E-128 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 DA442_03595 dcaab10e233d01de406d6ba6eab35d87 281 SUPERFAMILY SSF55620 184 267 5.41E-10 T 14-10-2018 DA442_03595 dcaab10e233d01de406d6ba6eab35d87 281 Pfam PF14489 QueF-like protein 194 270 6.1E-27 T 14-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 DA442_03595 dcaab10e233d01de406d6ba6eab35d87 281 PIRSF PIRSF004750 6 281 2.1E-130 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 DA442_03595 dcaab10e233d01de406d6ba6eab35d87 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 164.979 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 DA442_03595 dcaab10e233d01de406d6ba6eab35d87 281 Gene3D G3DSA:3.30.1130.10 21 138 3.3E-45 T 14-10-2018 DA442_03595 dcaab10e233d01de406d6ba6eab35d87 281 Gene3D G3DSA:3.30.1130.10 143 281 8.8E-63 T 14-10-2018 DA442_20460 3127a67820acb0d009faece0ff7866c6 258 Gene3D G3DSA:3.90.226.10 1 258 1.0E-78 T 14-10-2018 DA442_20460 3127a67820acb0d009faece0ff7866c6 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 257 1.9E-56 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 DA442_20460 3127a67820acb0d009faece0ff7866c6 258 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 DA442_20460 3127a67820acb0d009faece0ff7866c6 258 SUPERFAMILY SSF52096 3 257 3.87E-76 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DA442_04790 5f4ed8be549056570a84855eeb5d2155 208 Gene3D G3DSA:3.90.226.10 4 207 2.7E-85 T 14-10-2018 DA442_04790 5f4ed8be549056570a84855eeb5d2155 208 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 15 205 1.2E-107 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DA442_04790 5f4ed8be549056570a84855eeb5d2155 208 SUPERFAMILY SSF52096 23 206 8.42E-76 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DA442_04790 5f4ed8be549056570a84855eeb5d2155 208 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 14-10-2018 IPR033135 ClpP, histidine active site DA442_04790 5f4ed8be549056570a84855eeb5d2155 208 Pfam PF00574 Clp protease 25 205 1.5E-89 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA DA442_04790 5f4ed8be549056570a84855eeb5d2155 208 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 14-10-2018 IPR018215 ClpP, Ser active site DA442_04790 5f4ed8be549056570a84855eeb5d2155 208 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 2.6E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DA442_04790 5f4ed8be549056570a84855eeb5d2155 208 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 2.6E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DA442_04790 5f4ed8be549056570a84855eeb5d2155 208 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 2.6E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DA442_04790 5f4ed8be549056570a84855eeb5d2155 208 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 2.6E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DA442_04790 5f4ed8be549056570a84855eeb5d2155 208 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 2.6E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DA442_04790 5f4ed8be549056570a84855eeb5d2155 208 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 44.409 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DA442_01985 4dfd44b04cb9be7a4d2a54079440a345 239 Gene3D G3DSA:3.30.110.170 43 211 3.8E-12 T 14-10-2018 DA442_01985 4dfd44b04cb9be7a4d2a54079440a345 239 Gene3D G3DSA:3.30.70.2970 53 169 3.8E-12 T 14-10-2018 DA442_01985 4dfd44b04cb9be7a4d2a54079440a345 239 Pfam PF04402 Protein of unknown function (DUF541) 41 217 9.7E-17 T 14-10-2018 IPR007497 Protein of unknown function DUF541 DA442_01985 4dfd44b04cb9be7a4d2a54079440a345 239 PIRSF PIRSF029033 1 239 2.4E-109 T 14-10-2018 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein DA442_25880 fc89ca9c58896154d216a18b46836822 113 Pfam PF11137 Protein of unknown function (DUF2909) 42 106 6.2E-22 T 14-10-2018 IPR021313 Protein of unknown function DUF2909 DA442_19190 47801bb91203eb1c5561f229795ccfc4 262 Gene3D G3DSA:3.30.2010.10 52 139 1.6E-7 T 14-10-2018 DA442_19190 47801bb91203eb1c5561f229795ccfc4 262 Pfam PF01435 Peptidase family M48 70 246 2.4E-46 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 DA442_21965 739fbdaedc09987af161a6c566ae2d5c 259 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 44 160 5.9E-19 T 14-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 DA442_21965 739fbdaedc09987af161a6c566ae2d5c 259 SUPERFAMILY SSF49354 29 160 9.91E-25 T 14-10-2018 IPR008962 PapD-like superfamily DA442_21965 739fbdaedc09987af161a6c566ae2d5c 259 Gene3D G3DSA:2.60.40.10 39 161 1.7E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold DA442_05245 0020405b5b9927b363b676ce4a81f52d 268 Gene3D G3DSA:3.60.10.10 1 268 2.4E-78 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DA442_05245 0020405b5b9927b363b676ce4a81f52d 268 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 198 214 - T 14-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 DA442_05245 0020405b5b9927b363b676ce4a81f52d 268 SUPERFAMILY SSF56219 1 268 3.8E-86 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DA442_05245 0020405b5b9927b363b676ce4a81f52d 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 267 2.8E-87 T 14-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 DA442_05245 0020405b5b9927b363b676ce4a81f52d 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 267 1.0E-100 T 14-10-2018 DA442_05245 0020405b5b9927b363b676ce4a81f52d 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 260 4.2E-20 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase DA442_05245 0020405b5b9927b363b676ce4a81f52d 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 14-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 DA442_24360 03269c1d913ec02e6bb4082420375310 677 Pfam PF00082 Subtilase family 477 538 9.4E-14 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 DA442_24360 03269c1d913ec02e6bb4082420375310 677 SUPERFAMILY SSF52743 123 546 2.31E-104 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 DA442_24360 03269c1d913ec02e6bb4082420375310 677 Pfam PF02225 PA domain 373 465 2.6E-7 T 14-10-2018 IPR003137 PA domain DA442_24360 03269c1d913ec02e6bb4082420375310 677 Pfam PF00082 Subtilase family 146 333 4.8E-28 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 DA442_24360 03269c1d913ec02e6bb4082420375310 677 PRINTS PR00723 Subtilisin serine protease family (S8) signature 142 161 6.7E-16 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related DA442_24360 03269c1d913ec02e6bb4082420375310 677 PRINTS PR00723 Subtilisin serine protease family (S8) signature 487 503 6.7E-16 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related DA442_24360 03269c1d913ec02e6bb4082420375310 677 PRINTS PR00723 Subtilisin serine protease family (S8) signature 182 195 6.7E-16 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related DA442_24360 03269c1d913ec02e6bb4082420375310 677 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 488 498 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site DA442_24360 03269c1d913ec02e6bb4082420375310 677 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 186 196 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site DA442_24360 03269c1d913ec02e6bb4082420375310 677 Gene3D G3DSA:3.50.30.30 335 480 2.4E-158 T 14-10-2018 DA442_24360 03269c1d913ec02e6bb4082420375310 677 Gene3D G3DSA:3.40.50.200 144 545 2.4E-158 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 DA442_24360 03269c1d913ec02e6bb4082420375310 677 Gene3D G3DSA:2.60.120.260 561 677 1.6E-13 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily DA442_24360 03269c1d913ec02e6bb4082420375310 677 Pfam PF01483 Proprotein convertase P-domain 597 676 4.7E-22 T 14-10-2018 IPR002884 P domain GO:0004252|GO:0006508 DA442_24360 03269c1d913ec02e6bb4082420375310 677 SUPERFAMILY SSF49785 567 676 3.74E-22 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily DA442_01945 388338c0d9d5163d8d8cad91c4e545da 458 SMART SM00304 177 230 2.0E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_01945 388338c0d9d5163d8d8cad91c4e545da 458 Gene3D G3DSA:3.30.565.10 300 456 4.5E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_01945 388338c0d9d5163d8d8cad91c4e545da 458 SUPERFAMILY SSF47384 215 296 2.55E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DA442_01945 388338c0d9d5163d8d8cad91c4e545da 458 SMART SM00388 231 297 1.9E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_01945 388338c0d9d5163d8d8cad91c4e545da 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 405 5.9E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_01945 388338c0d9d5163d8d8cad91c4e545da 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 431 5.9E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_01945 388338c0d9d5163d8d8cad91c4e545da 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 391 5.9E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_01945 388338c0d9d5163d8d8cad91c4e545da 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 449 5.9E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_01945 388338c0d9d5163d8d8cad91c4e545da 458 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 8 449 1.0E-118 T 14-10-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 DA442_01945 388338c0d9d5163d8d8cad91c4e545da 458 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 342 450 3.9E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_01945 388338c0d9d5163d8d8cad91c4e545da 458 Gene3D G3DSA:1.10.287.130 181 298 1.0E-19 T 14-10-2018 DA442_01945 388338c0d9d5163d8d8cad91c4e545da 458 SMART SM00387 340 452 6.2E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_01945 388338c0d9d5163d8d8cad91c4e545da 458 Pfam PF00512 His Kinase A (phospho-acceptor) domain 232 296 1.3E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_01945 388338c0d9d5163d8d8cad91c4e545da 458 SUPERFAMILY SSF55874 286 451 2.23E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_21185 01a173b5f77a8c7d662fb96e1e15bde1 218 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 14 210 2.3E-75 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DA442_21185 01a173b5f77a8c7d662fb96e1e15bde1 218 Gene3D G3DSA:3.90.870.10 6 218 2.1E-87 T 14-10-2018 DA442_21185 01a173b5f77a8c7d662fb96e1e15bde1 218 SUPERFAMILY SSF55821 10 213 5.04E-81 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DA442_21185 01a173b5f77a8c7d662fb96e1e15bde1 218 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 12 214 42.126 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DA442_21185 01a173b5f77a8c7d662fb96e1e15bde1 218 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 18 209 5.5E-78 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DA442_04380 382c19062eab2660429cb5f9e682eaae 177 Pfam PF00258 Flavodoxin 6 162 2.0E-32 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 DA442_04380 382c19062eab2660429cb5f9e682eaae 177 TIGRFAM TIGR01752 flav_long: flavodoxin 4 170 1.1E-70 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 DA442_04380 382c19062eab2660429cb5f9e682eaae 177 SUPERFAMILY SSF52218 4 172 7.14E-51 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DA442_04380 382c19062eab2660429cb5f9e682eaae 177 PIRSF PIRSF038996 1 174 2.4E-66 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 DA442_04380 382c19062eab2660429cb5f9e682eaae 177 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 DA442_04380 382c19062eab2660429cb5f9e682eaae 177 Gene3D G3DSA:3.40.50.360 3 176 4.4E-55 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DA442_17160 f67daa6504bd2c00f338fabff67cb788 151 Pfam PF07681 DoxX 27 108 9.1E-18 T 14-10-2018 IPR032808 DoxX family DA442_03955 30b5b3e31517701c813c5d01ca8cc9be 46 Pfam PF11346 Protein of unknown function (DUF3149) 4 43 1.7E-16 T 14-10-2018 IPR021494 Protein of unknown function DUF3149 DA442_19810 e6d575b05a34fca51d20f09348406c50 262 SUPERFAMILY SSF53474 9 247 9.59E-36 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_19810 e6d575b05a34fca51d20f09348406c50 262 Pfam PF01764 Lipase (class 3) 60 204 2.8E-27 T 14-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 DA442_19810 e6d575b05a34fca51d20f09348406c50 262 Gene3D G3DSA:3.40.50.1820 7 235 1.6E-31 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_14300 19aaa7b972ebbb60be8854dfb6662233 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 2.8E-27 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_14300 19aaa7b972ebbb60be8854dfb6662233 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 23.052 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_14300 19aaa7b972ebbb60be8854dfb6662233 82 Pfam PF00886 Ribosomal protein S16 8 68 1.2E-23 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_14300 19aaa7b972ebbb60be8854dfb6662233 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 14-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_14300 19aaa7b972ebbb60be8854dfb6662233 82 SUPERFAMILY SSF54565 1 76 5.89E-28 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_14300 19aaa7b972ebbb60be8854dfb6662233 82 Gene3D G3DSA:3.30.1320.10 1 82 1.6E-31 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_11940 0c31c4050017032d1f10556a7b272385 182 Gene3D G3DSA:3.40.109.10 1 182 2.2E-42 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DA442_11940 0c31c4050017032d1f10556a7b272385 182 SUPERFAMILY SSF55469 1 181 8.51E-42 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DA442_11940 0c31c4050017032d1f10556a7b272385 182 PIRSF PIRSF000232 1 182 2.3E-62 T 14-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like DA442_11940 0c31c4050017032d1f10556a7b272385 182 Pfam PF00881 Nitroreductase family 8 161 7.4E-23 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 DA442_14045 400bf75ecd3a947143e9902b6b3b4e4d 331 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_14045 400bf75ecd3a947143e9902b6b3b4e4d 331 Pfam PF00005 ABC transporter 35 192 6.0E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_14045 400bf75ecd3a947143e9902b6b3b4e4d 331 Gene3D G3DSA:3.40.50.300 8 331 1.3E-77 T 14-10-2018 DA442_14045 400bf75ecd3a947143e9902b6b3b4e4d 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 328 1.1E-22 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DA442_14045 400bf75ecd3a947143e9902b6b3b4e4d 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 308 5.2E-17 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DA442_14045 400bf75ecd3a947143e9902b6b3b4e4d 331 SMART SM00382 43 241 7.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_14045 400bf75ecd3a947143e9902b6b3b4e4d 331 SUPERFAMILY SSF52540 10 262 6.14E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_07970 ad37586db4fd61e6293aa9e73b4abfef 288 Pfam PF03881 Fructosamine kinase 1 286 3.2E-125 T 14-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 DA442_07970 ad37586db4fd61e6293aa9e73b4abfef 288 SUPERFAMILY SSF56112 3 282 3.64E-44 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily DA442_07970 ad37586db4fd61e6293aa9e73b4abfef 288 Gene3D G3DSA:3.30.200.20 1 93 1.1E-21 T 14-10-2018 DA442_07970 ad37586db4fd61e6293aa9e73b4abfef 288 Gene3D G3DSA:3.90.1200.10 99 288 4.4E-67 T 14-10-2018 DA442_07970 ad37586db4fd61e6293aa9e73b4abfef 288 PIRSF PIRSF006221 1 288 8.2E-109 T 14-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 DA442_09695 0dc6145aa621217e075bb40d76ba8ff1 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 1.1E-14 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_04055 82300c3ce87211a1856a874bc7359961 141 Pfam PF05130 FlgN protein 2 131 4.9E-26 T 14-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 DA442_04055 82300c3ce87211a1856a874bc7359961 141 Gene3D G3DSA:1.20.58.300 1 113 4.4E-8 T 14-10-2018 DA442_04055 82300c3ce87211a1856a874bc7359961 141 SUPERFAMILY SSF140566 1 113 1.31E-23 T 14-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 DA442_14320 7c6645039b3296d01318fb54c0d29e45 172 PIRSF PIRSF006160 1 162 1.9E-67 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DA442_14320 7c6645039b3296d01318fb54c0d29e45 172 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 154 1.0E-61 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DA442_14320 7c6645039b3296d01318fb54c0d29e45 172 SUPERFAMILY SSF63411 4 162 4.49E-67 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DA442_14320 7c6645039b3296d01318fb54c0d29e45 172 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 148 1.0E-80 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DA442_14320 7c6645039b3296d01318fb54c0d29e45 172 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 35.796 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DA442_14320 7c6645039b3296d01318fb54c0d29e45 172 Gene3D G3DSA:3.30.1360.80 1 172 1.6E-74 T 14-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DA442_14320 7c6645039b3296d01318fb54c0d29e45 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 6.2E-52 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DA442_14320 7c6645039b3296d01318fb54c0d29e45 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 6.2E-52 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DA442_14320 7c6645039b3296d01318fb54c0d29e45 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 6.2E-52 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DA442_14320 7c6645039b3296d01318fb54c0d29e45 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 6.2E-52 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DA442_14320 7c6645039b3296d01318fb54c0d29e45 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 6.2E-52 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DA442_12640 3f98b4ffc630fce87f110445e677e630 191 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 37.834 T 14-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 DA442_12640 3f98b4ffc630fce87f110445e677e630 191 Gene3D G3DSA:3.40.50.10490 1 191 2.9E-71 T 14-10-2018 DA442_12640 3f98b4ffc630fce87f110445e677e630 191 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 2.6E-81 T 14-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 DA442_12640 3f98b4ffc630fce87f110445e677e630 191 Pfam PF13580 SIS domain 12 146 3.2E-30 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DA442_12640 3f98b4ffc630fce87f110445e677e630 191 SUPERFAMILY SSF53697 1 189 4.25E-52 T 14-10-2018 DA442_25690 544d57ce25ff55f31c8f19cc19d6414a 474 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 9 343 8.4E-147 T 14-10-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197 DA442_25690 544d57ce25ff55f31c8f19cc19d6414a 474 Gene3D G3DSA:3.40.50.2300 366 468 9.4E-30 T 14-10-2018 DA442_25690 544d57ce25ff55f31c8f19cc19d6414a 474 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 380 461 2.9E-10 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DA442_25690 544d57ce25ff55f31c8f19cc19d6414a 474 SUPERFAMILY SSF52794 380 466 1.2E-19 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DA442_25690 544d57ce25ff55f31c8f19cc19d6414a 474 Pfam PF02378 Phosphotransferase system, EIIC 19 276 7.7E-19 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DA442_00980 c66e54f18a9ae97cd71d0b33cfb1ccf1 288 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 288 7.8E-118 T 14-10-2018 IPR005229 Conserved hypothetical protein CHP00255 DA442_00980 c66e54f18a9ae97cd71d0b33cfb1ccf1 288 Pfam PF08340 Domain of unknown function (DUF1732) 204 288 1.5E-34 T 14-10-2018 IPR013551 Domain of unknown function DUF1732 DA442_00980 c66e54f18a9ae97cd71d0b33cfb1ccf1 288 Pfam PF03755 YicC-like family, N-terminal region 2 154 5.9E-44 T 14-10-2018 IPR013527 YicC-like, N-terminal DA442_21630 3fe9ca281c695a35ebd02446c966ffa0 655 Gene3D G3DSA:1.10.3470.10 338 654 2.6E-68 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DA442_21630 3fe9ca281c695a35ebd02446c966ffa0 655 SUPERFAMILY SSF81345 9 323 1.83E-55 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DA442_21630 3fe9ca281c695a35ebd02446c966ffa0 655 Pfam PF01032 FecCD transport family 377 651 2.9E-67 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DA442_21630 3fe9ca281c695a35ebd02446c966ffa0 655 Pfam PF01032 FecCD transport family 13 323 6.1E-62 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DA442_21630 3fe9ca281c695a35ebd02446c966ffa0 655 SUPERFAMILY SSF81345 356 651 9.15E-62 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DA442_21630 3fe9ca281c695a35ebd02446c966ffa0 655 Gene3D G3DSA:1.10.3470.10 3 328 1.1E-60 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DA442_21990 8ad2c4b31be024bde2071d59e939fd5b 397 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 5 397 6.3E-207 T 14-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 DA442_21990 8ad2c4b31be024bde2071d59e939fd5b 397 Gene3D G3DSA:3.90.1150.10 40 387 7.7E-135 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DA442_21990 8ad2c4b31be024bde2071d59e939fd5b 397 Gene3D G3DSA:3.40.640.10 58 296 7.7E-135 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_21990 8ad2c4b31be024bde2071d59e939fd5b 397 SUPERFAMILY SSF53383 4 395 1.65E-121 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_21990 8ad2c4b31be024bde2071d59e939fd5b 397 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 DA442_21990 8ad2c4b31be024bde2071d59e939fd5b 397 Pfam PF00155 Aminotransferase class I and II 43 387 1.8E-75 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DA442_21990 8ad2c4b31be024bde2071d59e939fd5b 397 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 395 53.317 T 14-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 DA442_20745 911ee75b88822c64e55953e507ce5d83 276 SUPERFAMILY SSF52821 3 179 3.27E-30 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily DA442_20745 911ee75b88822c64e55953e507ce5d83 276 SUPERFAMILY SSF52821 156 275 7.73E-33 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily DA442_20745 911ee75b88822c64e55953e507ce5d83 276 SMART SM00450 5 128 1.2E-14 T 14-10-2018 IPR001763 Rhodanese-like domain DA442_20745 911ee75b88822c64e55953e507ce5d83 276 SMART SM00450 152 272 9.4E-16 T 14-10-2018 IPR001763 Rhodanese-like domain DA442_20745 911ee75b88822c64e55953e507ce5d83 276 Gene3D G3DSA:3.40.250.10 1 143 2.2E-36 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily DA442_20745 911ee75b88822c64e55953e507ce5d83 276 Gene3D G3DSA:3.40.250.10 158 276 6.2E-40 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily DA442_20745 911ee75b88822c64e55953e507ce5d83 276 Pfam PF00581 Rhodanese-like domain 157 268 4.8E-12 T 14-10-2018 IPR001763 Rhodanese-like domain DA442_20745 911ee75b88822c64e55953e507ce5d83 276 Pfam PF00581 Rhodanese-like domain 6 124 1.8E-11 T 14-10-2018 IPR001763 Rhodanese-like domain DA442_21835 3bbb7b996e5c9b804bb058842b5d5403 126 PIRSF PIRSF028770 1 126 2.3E-73 T 14-10-2018 IPR011223 Uncharacterised conserved protein UCP028770 DA442_21835 3bbb7b996e5c9b804bb058842b5d5403 126 Pfam PF11742 Protein of unknown function (DUF3302) 3 78 1.3E-40 T 14-10-2018 IPR011223 Uncharacterised conserved protein UCP028770 DA442_06885 0ae7ecc4c6f91abd02597be725186ae2 598 Gene3D G3DSA:3.40.350.10 152 300 3.4E-37 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DA442_06885 0ae7ecc4c6f91abd02597be725186ae2 598 SUPERFAMILY SSF55920 308 562 4.58E-49 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like DA442_06885 0ae7ecc4c6f91abd02597be725186ae2 598 Pfam PF16188 C-terminal region of peptidase_M24 537 594 6.4E-23 T 14-10-2018 IPR032416 Peptidase M24, C-terminal domain DA442_06885 0ae7ecc4c6f91abd02597be725186ae2 598 SUPERFAMILY SSF53092 164 237 7.32E-5 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DA442_06885 0ae7ecc4c6f91abd02597be725186ae2 598 Pfam PF00557 Metallopeptidase family M24 325 526 4.4E-41 T 14-10-2018 IPR000994 Peptidase M24 DA442_06885 0ae7ecc4c6f91abd02597be725186ae2 598 Pfam PF16189 Creatinase/Prolidase N-terminal domain 153 311 1.1E-39 T 14-10-2018 DA442_06885 0ae7ecc4c6f91abd02597be725186ae2 598 Pfam PF01321 Creatinase/Prolidase N-terminal domain 10 136 1.0E-19 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 DA442_06885 0ae7ecc4c6f91abd02597be725186ae2 598 Gene3D G3DSA:3.40.350.10 1 151 3.1E-45 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DA442_06885 0ae7ecc4c6f91abd02597be725186ae2 598 Gene3D G3DSA:3.90.230.10 305 596 2.6E-92 T 14-10-2018 DA442_06885 0ae7ecc4c6f91abd02597be725186ae2 598 SUPERFAMILY SSF53092 14 139 6.45E-12 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DA442_02450 0f5261d04f43d54cbbcebaccaab3d0b1 275 Gene3D G3DSA:3.40.50.1980 143 271 5.9E-29 T 14-10-2018 DA442_02450 0f5261d04f43d54cbbcebaccaab3d0b1 275 SUPERFAMILY SSF53807 20 267 1.06E-57 T 14-10-2018 DA442_02450 0f5261d04f43d54cbbcebaccaab3d0b1 275 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 2 272 51.623 T 14-10-2018 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 DA442_02450 0f5261d04f43d54cbbcebaccaab3d0b1 275 Gene3D G3DSA:3.40.50.1980 23 140 2.2E-34 T 14-10-2018 DA442_02450 0f5261d04f43d54cbbcebaccaab3d0b1 275 Pfam PF01497 Periplasmic binding protein 26 247 9.5E-29 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain DA442_19150 85493900d60734b21356ec5b454ca3b5 544 SUPERFAMILY SSF52540 1 326 1.08E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_19150 85493900d60734b21356ec5b454ca3b5 544 Gene3D G3DSA:3.40.50.300 1 340 1.2E-15 T 14-10-2018 DA442_19150 85493900d60734b21356ec5b454ca3b5 544 Pfam PF11398 Protein of unknown function (DUF2813) 1 370 8.2E-145 T 14-10-2018 IPR022602 Protein of unknown function DUF2813 DA442_23290 fe9dcf76284037f2264063d0c4aee0e6 343 SUPERFAMILY SSF55874 211 338 3.27E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_23290 fe9dcf76284037f2264063d0c4aee0e6 343 SMART SM00387 242 340 1.6E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_23290 fe9dcf76284037f2264063d0c4aee0e6 343 Pfam PF06580 Histidine kinase 149 227 2.2E-24 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 DA442_23290 fe9dcf76284037f2264063d0c4aee0e6 343 Gene3D G3DSA:3.30.565.10 218 343 3.9E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_23290 fe9dcf76284037f2264063d0c4aee0e6 343 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 247 338 9.6E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_18795 dd47cdf01cdb0abaa01f34289e59c4a8 168 Hamap MF_00163 Peptide deformylase [def]. 2 162 29.656 T 14-10-2018 IPR023635 Peptide deformylase DA442_18795 dd47cdf01cdb0abaa01f34289e59c4a8 168 SUPERFAMILY SSF56420 2 164 3.66E-55 T 14-10-2018 IPR036821 Peptide deformylase superfamily DA442_18795 dd47cdf01cdb0abaa01f34289e59c4a8 168 Pfam PF01327 Polypeptide deformylase 4 152 7.6E-46 T 14-10-2018 IPR023635 Peptide deformylase DA442_18795 dd47cdf01cdb0abaa01f34289e59c4a8 168 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 3.0E-49 T 14-10-2018 IPR023635 Peptide deformylase DA442_18795 dd47cdf01cdb0abaa01f34289e59c4a8 168 Gene3D G3DSA:3.90.45.10 1 168 1.3E-61 T 14-10-2018 IPR036821 Peptide deformylase superfamily DA442_18795 dd47cdf01cdb0abaa01f34289e59c4a8 168 PRINTS PR01576 Peptide deformylase signature 33 62 1.1E-29 T 14-10-2018 IPR023635 Peptide deformylase DA442_18795 dd47cdf01cdb0abaa01f34289e59c4a8 168 PRINTS PR01576 Peptide deformylase signature 89 100 1.1E-29 T 14-10-2018 IPR023635 Peptide deformylase DA442_18795 dd47cdf01cdb0abaa01f34289e59c4a8 168 PRINTS PR01576 Peptide deformylase signature 120 149 1.1E-29 T 14-10-2018 IPR023635 Peptide deformylase DA442_18795 dd47cdf01cdb0abaa01f34289e59c4a8 168 PRINTS PR01576 Peptide deformylase signature 101 119 1.1E-29 T 14-10-2018 IPR023635 Peptide deformylase DA442_18795 dd47cdf01cdb0abaa01f34289e59c4a8 168 PIRSF PIRSF004749 1 168 7.2E-50 T 14-10-2018 IPR023635 Peptide deformylase DA442_04085 156b2f6369c2564ee5df6ad55360620c 137 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 137 2.9E-51 T 14-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 DA442_04085 156b2f6369c2564ee5df6ad55360620c 137 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site DA442_04085 156b2f6369c2564ee5df6ad55360620c 137 Pfam PF00460 Flagella basal body rod protein 7 32 1.8E-7 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 DA442_04085 156b2f6369c2564ee5df6ad55360620c 137 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 91 135 3.0E-12 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DA442_17560 d6e948887603490bfadd722d57df64ec 441 Gene3D G3DSA:3.90.220.20 224 381 2.1E-65 T 14-10-2018 DA442_17560 d6e948887603490bfadd722d57df64ec 441 SUPERFAMILY SSF116734 217 431 8.18E-16 T 14-10-2018 DA442_17560 d6e948887603490bfadd722d57df64ec 441 Gene3D G3DSA:3.90.220.20 4 427 2.1E-65 T 14-10-2018 DA442_17560 d6e948887603490bfadd722d57df64ec 441 SUPERFAMILY SSF116734 4 199 1.1E-39 T 14-10-2018 DA442_17560 d6e948887603490bfadd722d57df64ec 441 Pfam PF01420 Type I restriction modification DNA specificity domain 12 179 1.4E-24 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 DA442_17560 d6e948887603490bfadd722d57df64ec 441 Gene3D G3DSA:1.10.287.1120 146 424 2.1E-65 T 14-10-2018 DA442_16085 522b4b2ea20d1b31373b49e3d285ca3d 295 Pfam PF00892 EamA-like transporter family 4 135 7.2E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DA442_16085 522b4b2ea20d1b31373b49e3d285ca3d 295 Pfam PF00892 EamA-like transporter family 156 294 2.5E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DA442_16085 522b4b2ea20d1b31373b49e3d285ca3d 295 SUPERFAMILY SSF103481 202 293 9.68E-11 T 14-10-2018 DA442_16085 522b4b2ea20d1b31373b49e3d285ca3d 295 SUPERFAMILY SSF103481 36 140 5.1E-13 T 14-10-2018 DA442_18625 61aabfcac00e2e16e44d94932911de9c 301 SUPERFAMILY SSF103481 189 285 4.05E-9 T 14-10-2018 DA442_18625 61aabfcac00e2e16e44d94932911de9c 301 TIGRFAM TIGR00688 rarD: protein RarD 7 259 7.7E-53 T 14-10-2018 IPR004626 RarD protein GO:0005887 DA442_18625 61aabfcac00e2e16e44d94932911de9c 301 SUPERFAMILY SSF103481 58 143 9.15E-12 T 14-10-2018 DA442_18625 61aabfcac00e2e16e44d94932911de9c 301 Pfam PF00892 EamA-like transporter family 6 141 7.8E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DA442_18625 61aabfcac00e2e16e44d94932911de9c 301 Pfam PF00892 EamA-like transporter family 151 283 6.8E-7 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DA442_20020 7933d9c58b1c221e9330a973448737c9 176 PIRSF PIRSF028301 1 174 1.3E-66 T 14-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 DA442_20020 7933d9c58b1c221e9330a973448737c9 176 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 6 161 1.2E-60 T 14-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 DA442_20020 7933d9c58b1c221e9330a973448737c9 176 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 9 161 2.5E-62 T 14-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 DA442_21550 4a0bc5c71e51dfeda1ccf7497948deae 258 SUPERFAMILY SSF55804 128 249 1.03E-17 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DA442_21550 4a0bc5c71e51dfeda1ccf7497948deae 258 SUPERFAMILY SSF55594 9 88 4.32E-12 T 14-10-2018 IPR035895 HPr-like superfamily DA442_21550 4a0bc5c71e51dfeda1ccf7497948deae 258 Gene3D G3DSA:3.30.1340.10 4 89 1.6E-6 T 14-10-2018 IPR035895 HPr-like superfamily DA442_21550 4a0bc5c71e51dfeda1ccf7497948deae 258 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 128 251 4.4E-21 T 14-10-2018 IPR002178 PTS EIIA type-2 domain DA442_21550 4a0bc5c71e51dfeda1ccf7497948deae 258 PIRSF PIRSF029195 1 258 1.4E-172 T 14-10-2018 IPR016910 Uncharacterised conserved protein UCP029195, PTS-EIIA 2 DA442_21550 4a0bc5c71e51dfeda1ccf7497948deae 258 Gene3D G3DSA:3.40.930.10 105 251 3.0E-16 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DA442_23240 02bed5ea0a71d8862f5ede06956366bb 632 Pfam PF17149 Periplasmic sensor domain found in signal transduction proteins 40 145 1.2E-15 T 14-10-2018 IPR033414 Periplasmic sensor domain DA442_23240 02bed5ea0a71d8862f5ede06956366bb 632 SUPERFAMILY SSF55874 297 473 1.96E-48 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_23240 02bed5ea0a71d8862f5ede06956366bb 632 Gene3D G3DSA:3.30.565.10 307 473 8.1E-53 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_23240 02bed5ea0a71d8862f5ede06956366bb 632 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 468 3.0E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_23240 02bed5ea0a71d8862f5ede06956366bb 632 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 424 3.0E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_23240 02bed5ea0a71d8862f5ede06956366bb 632 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 449 3.0E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_23240 02bed5ea0a71d8862f5ede06956366bb 632 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 410 3.0E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_23240 02bed5ea0a71d8862f5ede06956366bb 632 SMART SM00448 503 617 8.5E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_23240 02bed5ea0a71d8862f5ede06956366bb 632 SMART SM00388 243 308 1.6E-25 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_23240 02bed5ea0a71d8862f5ede06956366bb 632 SUPERFAMILY SSF52172 501 622 1.71E-37 T 14-10-2018 IPR011006 CheY-like superfamily DA442_23240 02bed5ea0a71d8862f5ede06956366bb 632 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 470 1.7E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_23240 02bed5ea0a71d8862f5ede06956366bb 632 Gene3D G3DSA:3.40.50.2300 487 623 8.2E-43 T 14-10-2018 DA442_23240 02bed5ea0a71d8862f5ede06956366bb 632 SMART SM00387 355 471 4.7E-40 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_23240 02bed5ea0a71d8862f5ede06956366bb 632 SUPERFAMILY SSF47384 229 309 8.83E-22 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DA442_23240 02bed5ea0a71d8862f5ede06956366bb 632 Gene3D G3DSA:1.10.287.130 209 306 1.0E-30 T 14-10-2018 DA442_23240 02bed5ea0a71d8862f5ede06956366bb 632 Pfam PF00072 Response regulator receiver domain 505 616 1.2E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_23240 02bed5ea0a71d8862f5ede06956366bb 632 Pfam PF00512 His Kinase A (phospho-acceptor) domain 244 308 7.1E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_05385 113adc3ae8d269bb6202ab1d9d8df245 237 SMART SM00862 158 234 3.4E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DA442_05385 113adc3ae8d269bb6202ab1d9d8df245 237 SUPERFAMILY SSF52172 2 123 1.71E-36 T 14-10-2018 IPR011006 CheY-like superfamily DA442_05385 113adc3ae8d269bb6202ab1d9d8df245 237 SMART SM00448 3 113 8.6E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_05385 113adc3ae8d269bb6202ab1d9d8df245 237 Pfam PF00072 Response regulator receiver domain 5 113 2.5E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_05385 113adc3ae8d269bb6202ab1d9d8df245 237 Gene3D G3DSA:3.40.50.2300 1 136 1.4E-33 T 14-10-2018 DA442_05385 113adc3ae8d269bb6202ab1d9d8df245 237 SUPERFAMILY SSF46894 134 235 1.47E-26 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DA442_05385 113adc3ae8d269bb6202ab1d9d8df245 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 234 2.1E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DA442_05385 113adc3ae8d269bb6202ab1d9d8df245 237 Gene3D G3DSA:1.10.10.10 137 237 5.6E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_13855 cdbbf39bfe9e615a91a8c30d139c4611 296 Pfam PF01136 Peptidase family U32 85 241 1.7E-13 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 DA442_11215 a1a89f4ad00a5e0d849caeecdcf9386c 427 Pfam PF02687 FtsX-like permease family 322 420 2.1E-10 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DA442_11215 a1a89f4ad00a5e0d849caeecdcf9386c 427 Pfam PF12704 MacB-like periplasmic core domain 20 255 5.7E-27 T 14-10-2018 IPR025857 MacB-like periplasmic core domain DA442_17635 48e70a1a904aaa1ea9b016e93fe8fcce 248 SMART SM00079 24 244 0.0066 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 DA442_17635 48e70a1a904aaa1ea9b016e93fe8fcce 248 SMART SM00062 24 245 1.0E-75 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DA442_17635 48e70a1a904aaa1ea9b016e93fe8fcce 248 SUPERFAMILY SSF53850 1 246 5.69E-59 T 14-10-2018 DA442_17635 48e70a1a904aaa1ea9b016e93fe8fcce 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 243 9.5E-57 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DA442_17635 48e70a1a904aaa1ea9b016e93fe8fcce 248 Gene3D G3DSA:3.40.190.10 91 204 7.8E-30 T 14-10-2018 DA442_17635 48e70a1a904aaa1ea9b016e93fe8fcce 248 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 46 59 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site DA442_01510 66bf604a6395b32ef031fc55bd014857 167 Gene3D G3DSA:3.30.160.20 2 73 1.2E-31 T 14-10-2018 DA442_01510 66bf604a6395b32ef031fc55bd014857 167 ProSitePatterns PS00585 Ribosomal protein S5 signature. 29 61 - T 14-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site DA442_01510 66bf604a6395b32ef031fc55bd014857 167 Pfam PF00333 Ribosomal protein S5, N-terminal domain 12 75 6.1E-29 T 14-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 DA442_01510 66bf604a6395b32ef031fc55bd014857 167 SUPERFAMILY SSF54768 8 76 5.86E-24 T 14-10-2018 DA442_01510 66bf604a6395b32ef031fc55bd014857 167 SUPERFAMILY SSF54211 80 159 4.05E-27 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DA442_01510 66bf604a6395b32ef031fc55bd014857 167 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 3.0E-69 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 DA442_01510 66bf604a6395b32ef031fc55bd014857 167 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 164 34.556 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 DA442_01510 66bf604a6395b32ef031fc55bd014857 167 Pfam PF03719 Ribosomal protein S5, C-terminal domain 88 158 2.6E-30 T 14-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 DA442_01510 66bf604a6395b32ef031fc55bd014857 167 Gene3D G3DSA:3.30.230.10 75 167 6.2E-37 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DA442_23675 69f7eb23df773e79e8459e9e4a0bcc38 496 SUPERFAMILY SSF103473 10 493 5.75E-62 T 14-10-2018 IPR036259 MFS transporter superfamily DA442_23675 69f7eb23df773e79e8459e9e4a0bcc38 496 Pfam PF07690 Major Facilitator Superfamily 17 408 1.9E-56 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DA442_23675 69f7eb23df773e79e8459e9e4a0bcc38 496 Gene3D G3DSA:1.20.1250.20 264 496 6.1E-14 T 14-10-2018 DA442_23675 69f7eb23df773e79e8459e9e4a0bcc38 496 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 13 491 8.9E-109 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 DA442_23675 69f7eb23df773e79e8459e9e4a0bcc38 496 Gene3D G3DSA:1.20.1720.10 14 214 1.6E-45 T 14-10-2018 DA442_08110 d737a2ecf499f69ad68166369f6e686b 553 Pfam PF00037 4Fe-4S binding domain 446 466 2.0E-5 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DA442_08110 d737a2ecf499f69ad68166369f6e686b 553 Pfam PF00037 4Fe-4S binding domain 419 435 1.5E-4 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DA442_08110 d737a2ecf499f69ad68166369f6e686b 553 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 451 462 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DA442_08110 d737a2ecf499f69ad68166369f6e686b 553 Gene3D G3DSA:3.30.70.20 413 482 2.1E-11 T 14-10-2018 DA442_08110 d737a2ecf499f69ad68166369f6e686b 553 Gene3D G3DSA:3.30.70.20 178 254 1.2E-12 T 14-10-2018 DA442_08110 d737a2ecf499f69ad68166369f6e686b 553 Pfam PF12838 4Fe-4S dicluster domain 185 231 1.2E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DA442_08110 d737a2ecf499f69ad68166369f6e686b 553 SUPERFAMILY SSF54862 143 504 4.42E-38 T 14-10-2018 DA442_15620 51cf75e5e29fc52abf1d2968b6c27101 197 Gene3D G3DSA:3.30.70.60 92 197 2.9E-26 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 DA442_15620 51cf75e5e29fc52abf1d2968b6c27101 197 Pfam PF04350 Pilus assembly protein, PilO 48 189 3.7E-45 T 14-10-2018 IPR007445 Pilus assembly protein, PilO DA442_15620 51cf75e5e29fc52abf1d2968b6c27101 197 PIRSF PIRSF016482 1 197 2.0E-68 T 14-10-2018 IPR007445 Pilus assembly protein, PilO DA442_16595 be626520ea85999f320d5624563e5a1f 182 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 14-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site DA442_16595 be626520ea85999f320d5624563e5a1f 182 Gene3D G3DSA:2.30.30.30 123 181 3.0E-25 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 DA442_16595 be626520ea85999f320d5624563e5a1f 182 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 181 2.2E-70 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DA442_16595 be626520ea85999f320d5624563e5a1f 182 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 6.8E-22 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DA442_16595 be626520ea85999f320d5624563e5a1f 182 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 6.8E-22 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DA442_16595 be626520ea85999f320d5624563e5a1f 182 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 6.8E-22 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DA442_16595 be626520ea85999f320d5624563e5a1f 182 SUPERFAMILY SSF82679 6 116 4.58E-40 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DA442_16595 be626520ea85999f320d5624563e5a1f 182 SMART SM00738 6 115 1.0E-50 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DA442_16595 be626520ea85999f320d5624563e5a1f 182 SUPERFAMILY SSF50104 126 181 3.31E-19 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily DA442_16595 be626520ea85999f320d5624563e5a1f 182 Gene3D G3DSA:3.30.70.940 1 122 3.3E-47 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DA442_16595 be626520ea85999f320d5624563e5a1f 182 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 25.932 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DA442_16595 be626520ea85999f320d5624563e5a1f 182 SMART SM00739 127 154 3.9E-4 T 14-10-2018 IPR005824 KOW DA442_16595 be626520ea85999f320d5624563e5a1f 182 Pfam PF02357 Transcription termination factor nusG 7 112 8.8E-27 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DA442_16595 be626520ea85999f320d5624563e5a1f 182 Pfam PF00467 KOW motif 131 162 4.8E-7 T 14-10-2018 IPR005824 KOW DA442_17435 8de6f2d9a1c24cee3312c524ba2f25dd 401 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 4 368 2.2E-82 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 DA442_17435 8de6f2d9a1c24cee3312c524ba2f25dd 401 Gene3D G3DSA:1.20.1720.10 8 377 9.5E-72 T 14-10-2018 DA442_17435 8de6f2d9a1c24cee3312c524ba2f25dd 401 SUPERFAMILY SSF103473 5 378 2.88E-51 T 14-10-2018 IPR036259 MFS transporter superfamily DA442_17435 8de6f2d9a1c24cee3312c524ba2f25dd 401 Pfam PF07690 Major Facilitator Superfamily 13 349 7.7E-35 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DA442_23490 cb08db656056f9669784cb3c0bf30eed 446 Pfam PF01554 MatE 247 404 2.6E-22 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DA442_23490 cb08db656056f9669784cb3c0bf30eed 446 Pfam PF01554 MatE 19 179 8.5E-26 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DA442_23490 cb08db656056f9669784cb3c0bf30eed 446 PIRSF PIRSF006603 2 446 6.0E-68 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DA442_23490 cb08db656056f9669784cb3c0bf30eed 446 TIGRFAM TIGR00797 matE: MATE efflux family protein 19 417 1.7E-58 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DA442_22290 d52b41d291c6324e211bd87a77b2833a 322 Gene3D G3DSA:3.40.190.10 98 310 4.2E-26 T 14-10-2018 DA442_22290 d52b41d291c6324e211bd87a77b2833a 322 SUPERFAMILY SSF46785 6 85 9.87E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_22290 d52b41d291c6324e211bd87a77b2833a 322 Gene3D G3DSA:1.10.10.10 1 90 2.4E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_22290 d52b41d291c6324e211bd87a77b2833a 322 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 2.2E-13 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_22290 d52b41d291c6324e211bd87a77b2833a 322 Gene3D G3DSA:3.40.190.10 180 279 4.2E-26 T 14-10-2018 DA442_22290 d52b41d291c6324e211bd87a77b2833a 322 SUPERFAMILY SSF53850 98 314 7.78E-24 T 14-10-2018 DA442_22290 d52b41d291c6324e211bd87a77b2833a 322 Pfam PF03466 LysR substrate binding domain 99 312 1.2E-10 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_06460 134dd4ef43c78d1edacaad4868249ee7 784 SMART SM00487 2 176 4.4E-13 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DA442_06460 134dd4ef43c78d1edacaad4868249ee7 784 Pfam PF00270 DEAD/DEAH box helicase 16 151 1.4E-8 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DA442_06460 134dd4ef43c78d1edacaad4868249ee7 784 Gene3D G3DSA:3.40.50.300 2 162 1.8E-41 T 14-10-2018 DA442_06460 134dd4ef43c78d1edacaad4868249ee7 784 SUPERFAMILY SSF52540 18 326 1.22E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_06460 134dd4ef43c78d1edacaad4868249ee7 784 SMART SM00847 372 460 0.0023 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 DA442_06460 134dd4ef43c78d1edacaad4868249ee7 784 Pfam PF00271 Helicase conserved C-terminal domain 197 314 6.5E-15 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_06460 134dd4ef43c78d1edacaad4868249ee7 784 Gene3D G3DSA:1.20.120.1080 355 451 4.1E-8 T 14-10-2018 DA442_06460 134dd4ef43c78d1edacaad4868249ee7 784 Gene3D G3DSA:3.40.50.300 168 331 4.2E-44 T 14-10-2018 DA442_06460 134dd4ef43c78d1edacaad4868249ee7 784 SMART SM00490 219 315 8.7E-15 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_06460 134dd4ef43c78d1edacaad4868249ee7 784 Pfam PF04408 Helicase associated domain (HA2) 373 443 1.5E-7 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 DA442_19110 e1381d4f5995995c29296adc26b1d327 262 SUPERFAMILY SSF141868 28 257 5.36E-42 T 14-10-2018 IPR035919 EAL domain superfamily DA442_19110 e1381d4f5995995c29296adc26b1d327 262 Pfam PF00563 EAL domain 27 250 6.6E-41 T 14-10-2018 IPR001633 EAL domain DA442_19110 e1381d4f5995995c29296adc26b1d327 262 SMART SM00052 18 255 7.6E-11 T 14-10-2018 IPR001633 EAL domain DA442_19110 e1381d4f5995995c29296adc26b1d327 262 Gene3D G3DSA:3.20.20.450 15 258 1.3E-41 T 14-10-2018 IPR035919 EAL domain superfamily DA442_02120 4e20848e1483e0fc1422e19e71f582a5 119 Pfam PF02152 Dihydroneopterin aldolase 6 115 2.4E-32 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 DA442_02120 4e20848e1483e0fc1422e19e71f582a5 119 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 116 2.1E-30 T 14-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 DA442_02120 4e20848e1483e0fc1422e19e71f582a5 119 TIGRFAM TIGR00526 folB_dom: FolB domain 4 117 1.1E-36 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 DA442_02120 4e20848e1483e0fc1422e19e71f582a5 119 Gene3D G3DSA:3.30.1130.10 1 118 1.0E-45 T 14-10-2018 DA442_02120 4e20848e1483e0fc1422e19e71f582a5 119 SMART SM00905 6 116 7.0E-49 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 DA442_02120 4e20848e1483e0fc1422e19e71f582a5 119 SUPERFAMILY SSF55620 3 117 2.39E-37 T 14-10-2018 DA442_02375 49e50ecc894cbb9338fcfeff980b8b40 260 Gene3D G3DSA:3.10.20.310 55 123 2.0E-24 T 14-10-2018 DA442_02375 49e50ecc894cbb9338fcfeff980b8b40 260 Pfam PF03799 Cell division protein FtsQ 127 239 2.6E-24 T 14-10-2018 IPR005548 Cell division protein FtsQ/DivIB DA442_02375 49e50ecc894cbb9338fcfeff980b8b40 260 Gene3D G3DSA:3.40.50.11690 125 252 5.0E-37 T 14-10-2018 DA442_02375 49e50ecc894cbb9338fcfeff980b8b40 260 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 23 247 22.469 T 14-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 DA442_02375 49e50ecc894cbb9338fcfeff980b8b40 260 Pfam PF08478 POTRA domain, FtsQ-type 54 123 2.8E-17 T 14-10-2018 IPR013685 POTRA domain, FtsQ-type DA442_22220 08f7056be7e83c2294b16b6392a840de 285 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 14-10-2018 IPR000540 Flagellar motor protein MotA, conserved site DA442_22220 08f7056be7e83c2294b16b6392a840de 285 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 281 1.7E-115 T 14-10-2018 IPR022522 Flagellar motor stator, MotA DA442_22220 08f7056be7e83c2294b16b6392a840de 285 Pfam PF01618 MotA/TolQ/ExbB proton channel family 134 238 8.2E-9 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel DA442_11735 e5632c1495894ee05044cff25290b5fe 297 Gene3D G3DSA:3.40.50.12300 4 297 6.9E-81 T 14-10-2018 IPR038136 Gluconeogenesis factor superfamily DA442_11735 e5632c1495894ee05044cff25290b5fe 297 Pfam PF01933 Uncharacterised protein family UPF0052 9 286 2.1E-76 T 14-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 DA442_11735 e5632c1495894ee05044cff25290b5fe 297 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 9 290 8.2E-102 T 14-10-2018 IPR010119 Gluconeogenesis factor DA442_11735 e5632c1495894ee05044cff25290b5fe 297 SUPERFAMILY SSF142338 6 291 6.67E-84 T 14-10-2018 DA442_11735 e5632c1495894ee05044cff25290b5fe 297 Hamap MF_00973 Gluconeogenesis factor. 5 296 30.341 T 14-10-2018 IPR010119 Gluconeogenesis factor DA442_03900 24002ce8967a18594221428611a72d3c 212 Gene3D G3DSA:2.50.20.10 32 211 3.6E-51 T 14-10-2018 DA442_03900 24002ce8967a18594221428611a72d3c 212 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 11 210 26.549 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 DA442_03900 24002ce8967a18594221428611a72d3c 212 Pfam PF03550 Outer membrane lipoprotein LolB 52 208 2.9E-43 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 DA442_03900 24002ce8967a18594221428611a72d3c 212 SUPERFAMILY SSF89392 27 210 6.28E-49 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX DA442_03900 24002ce8967a18594221428611a72d3c 212 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 12 209 2.7E-37 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 DA442_10855 f17238af1bdf22e8dba24b530e79b3be 192 Gene3D G3DSA:3.90.10.10 31 132 4.7E-7 T 14-10-2018 DA442_10855 f17238af1bdf22e8dba24b530e79b3be 192 Pfam PF13435 Cytochrome c554 and c-prime 76 152 2.4E-4 T 14-10-2018 IPR023155 Cytochrome c-552/4 DA442_10855 f17238af1bdf22e8dba24b530e79b3be 192 Gene3D G3DSA:3.90.10.10 133 190 4.1E-6 T 14-10-2018 DA442_10855 f17238af1bdf22e8dba24b530e79b3be 192 SUPERFAMILY SSF48695 9 182 2.89E-26 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily DA442_10855 f17238af1bdf22e8dba24b530e79b3be 192 TIGRFAM TIGR03146 cyt_nit_nrfB: cytochrome c nitrite reductase, pentaheme subunit 34 180 1.7E-63 T 14-10-2018 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit GO:0006807|GO:0020037|GO:0042597 DA442_17870 f8c1f975fa187560ee9445d90a3bc3c7 484 SUPERFAMILY SSF52540 41 208 1.11E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_17870 f8c1f975fa187560ee9445d90a3bc3c7 484 Gene3D G3DSA:3.40.50.300 4 238 2.6E-24 T 14-10-2018 DA442_17870 f8c1f975fa187560ee9445d90a3bc3c7 484 Pfam PF00005 ABC transporter 41 159 4.4E-11 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_17870 f8c1f975fa187560ee9445d90a3bc3c7 484 SUPERFAMILY SSF52540 242 456 5.81E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_17870 f8c1f975fa187560ee9445d90a3bc3c7 484 Gene3D G3DSA:3.40.50.300 239 471 3.7E-41 T 14-10-2018 DA442_17870 f8c1f975fa187560ee9445d90a3bc3c7 484 Pfam PF00005 ABC transporter 272 422 3.3E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_17870 f8c1f975fa187560ee9445d90a3bc3c7 484 SMART SM00382 279 480 5.8E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_14780 54ffeb96ea71cf2633b3e17fe9d0a9f1 272 PIRSF PIRSF000193 3 270 4.1E-75 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DA442_14780 54ffeb96ea71cf2633b3e17fe9d0a9f1 272 Gene3D G3DSA:1.10.3730.10 165 272 2.0E-34 T 14-10-2018 DA442_14780 54ffeb96ea71cf2633b3e17fe9d0a9f1 272 SUPERFAMILY SSF48179 163 270 3.4E-30 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DA442_14780 54ffeb96ea71cf2633b3e17fe9d0a9f1 272 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 5 99 9.6E-26 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal DA442_14780 54ffeb96ea71cf2633b3e17fe9d0a9f1 272 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 268 2.9E-73 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DA442_14780 54ffeb96ea71cf2633b3e17fe9d0a9f1 272 SUPERFAMILY SSF51735 4 160 7.9E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_14780 54ffeb96ea71cf2633b3e17fe9d0a9f1 272 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 268 6.0E-30 T 14-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DA442_14780 54ffeb96ea71cf2633b3e17fe9d0a9f1 272 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 268 25.24 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DA442_14780 54ffeb96ea71cf2633b3e17fe9d0a9f1 272 Gene3D G3DSA:3.40.50.720 2 164 1.3E-50 T 14-10-2018 DA442_14780 54ffeb96ea71cf2633b3e17fe9d0a9f1 272 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 224 246 - T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DA442_06755 3809d8dbb8d694f41407167e0360728a 76 SUPERFAMILY SSF52833 3 68 6.2E-14 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_06755 3809d8dbb8d694f41407167e0360728a 76 Pfam PF00462 Glutaredoxin 4 60 6.3E-12 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 DA442_06755 3809d8dbb8d694f41407167e0360728a 76 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 14-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 DA442_06755 3809d8dbb8d694f41407167e0360728a 76 Gene3D G3DSA:3.40.30.10 2 75 3.7E-16 T 14-10-2018 DA442_13195 dca8c234905edf8676ba4b3d693fd377 183 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 108 9.9E-9 T 14-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like DA442_13195 dca8c234905edf8676ba4b3d693fd377 183 SUPERFAMILY SSF110857 1 124 1.06E-16 T 14-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily DA442_13195 dca8c234905edf8676ba4b3d693fd377 183 Gene3D G3DSA:3.10.490.10 1 121 6.7E-9 T 14-10-2018 DA442_06915 cf127710d0e0e305e6be7e756ae3bb31 368 Pfam PF07687 Peptidase dimerisation domain 182 273 5.2E-15 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain DA442_06915 cf127710d0e0e305e6be7e756ae3bb31 368 PIRSF PIRSF001123 283 368 3.4E-4 T 14-10-2018 IPR008007 Peptidase M42 DA442_06915 cf127710d0e0e305e6be7e756ae3bb31 368 PIRSF PIRSF001123 6 105 0.048 T 14-10-2018 IPR008007 Peptidase M42 DA442_06915 cf127710d0e0e305e6be7e756ae3bb31 368 PIRSF PIRSF001123 103 183 6.5E-4 T 14-10-2018 IPR008007 Peptidase M42 DA442_06915 cf127710d0e0e305e6be7e756ae3bb31 368 SUPERFAMILY SSF55031 177 289 4.58E-22 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DA442_06915 cf127710d0e0e305e6be7e756ae3bb31 368 Gene3D G3DSA:3.40.630.10 16 362 1.4E-112 T 14-10-2018 DA442_06915 cf127710d0e0e305e6be7e756ae3bb31 368 SUPERFAMILY SSF53187 7 367 2.77E-58 T 14-10-2018 DA442_06915 cf127710d0e0e305e6be7e756ae3bb31 368 TIGRFAM TIGR01883 PepT-like: peptidase T-like protein 8 362 3.0E-158 T 14-10-2018 IPR010162 Peptidase M20B, peptidase T-like DA442_06915 cf127710d0e0e305e6be7e756ae3bb31 368 Gene3D G3DSA:3.30.70.360 176 287 1.4E-112 T 14-10-2018 DA442_06915 cf127710d0e0e305e6be7e756ae3bb31 368 Pfam PF01546 Peptidase family M20/M25/M40 73 367 3.4E-17 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 DA442_13680 92c7f8e1b6fc2bfbb95ee7a7574d8472 368 Pfam PF13776 Domain of unknown function (DUF4172) 2 82 1.8E-29 T 14-10-2018 IPR025230 Domain of unknown function DUF4172 DA442_13680 92c7f8e1b6fc2bfbb95ee7a7574d8472 368 Gene3D G3DSA:1.10.3290.10 29 291 3.2E-46 T 14-10-2018 IPR036597 Fido-like domain superfamily DA442_13680 92c7f8e1b6fc2bfbb95ee7a7574d8472 368 SUPERFAMILY SSF140931 95 293 2.35E-39 T 14-10-2018 IPR036597 Fido-like domain superfamily DA442_13680 92c7f8e1b6fc2bfbb95ee7a7574d8472 368 Pfam PF02661 Fic/DOC family 111 223 1.0E-15 T 14-10-2018 IPR003812 Fido domain DA442_13680 92c7f8e1b6fc2bfbb95ee7a7574d8472 368 Gene3D G3DSA:1.10.10.10 298 368 3.3E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_13835 17c33db8d7c9f5bcbb717c5c77b51f43 167 SUPERFAMILY SSF55729 1 127 5.48E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_13835 17c33db8d7c9f5bcbb717c5c77b51f43 167 Pfam PF13527 Acetyltransferase (GNAT) domain 3 123 6.1E-9 T 14-10-2018 DA442_13835 17c33db8d7c9f5bcbb717c5c77b51f43 167 Gene3D G3DSA:3.40.630.30 1 167 5.1E-46 T 14-10-2018 DA442_01235 e4171c41691ca6c281cf1f223db0b6c1 429 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 324 406 1.4E-12 T 14-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain DA442_01235 e4171c41691ca6c281cf1f223db0b6c1 429 Pfam PF01943 Polysaccharide biosynthesis protein 7 270 3.8E-16 T 14-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 DA442_06645 b96ee1dd8ba5870b20196e852e87e23d 257 SUPERFAMILY SSF81301 63 215 1.19E-15 T 14-10-2018 DA442_06645 b96ee1dd8ba5870b20196e852e87e23d 257 Gene3D G3DSA:3.30.460.10 62 192 1.7E-6 T 14-10-2018 DA442_00115 155e3cc2ef6e7133ad0ffeb091d1c3d1 175 SUPERFAMILY SSF52218 3 158 4.03E-31 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DA442_00115 155e3cc2ef6e7133ad0ffeb091d1c3d1 175 Gene3D G3DSA:3.40.50.360 2 114 9.4E-12 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DA442_00115 155e3cc2ef6e7133ad0ffeb091d1c3d1 175 Pfam PF12724 Flavodoxin domain 5 153 4.1E-51 T 14-10-2018 IPR026816 Flavodoxin domain DA442_22205 f48154e07cff0d824baebe42e60990c0 359 Pfam PF02120 Flagellar hook-length control protein FliK 240 319 8.0E-20 T 14-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal DA442_22205 f48154e07cff0d824baebe42e60990c0 359 Gene3D G3DSA:3.30.750.140 216 331 8.9E-22 T 14-10-2018 IPR038610 FliK-like, C-terminal domain superfamily DA442_16905 39244b493cadc6439292df864b3b9288 205 Pfam PF01810 LysE type translocator 15 202 7.5E-35 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DA442_16905 39244b493cadc6439292df864b3b9288 205 PIRSF PIRSF006324 1 205 7.7E-56 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DA442_06245 16b7f7b55a10745569ee73be7a695d82 245 Pfam PF11140 Protein of unknown function (DUF2913) 29 240 6.9E-85 T 14-10-2018 IPR021316 Protein of unknown function DUF2913 DA442_16960 1287a4256d1c3d327c30fa68862cc986 276 Gene3D G3DSA:3.10.310.10 117 263 2.4E-106 T 14-10-2018 DA442_16960 1287a4256d1c3d327c30fa68862cc986 276 Pfam PF01678 Diaminopimelate epimerase 154 269 5.1E-31 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DA442_16960 1287a4256d1c3d327c30fa68862cc986 276 Pfam PF01678 Diaminopimelate epimerase 5 125 1.8E-33 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DA442_16960 1287a4256d1c3d327c30fa68862cc986 276 SUPERFAMILY SSF54506 2 274 1.88E-52 T 14-10-2018 DA442_16960 1287a4256d1c3d327c30fa68862cc986 276 Gene3D G3DSA:3.10.310.10 5 272 2.4E-106 T 14-10-2018 DA442_16960 1287a4256d1c3d327c30fa68862cc986 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 14-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DA442_16960 1287a4256d1c3d327c30fa68862cc986 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 39.533 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DA442_16960 1287a4256d1c3d327c30fa68862cc986 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 3.8E-101 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DA442_20085 f4f8483f19add2da9fa5e12807294e4b 164 Pfam PF13581 Histidine kinase-like ATPase domain 12 147 4.8E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_20085 f4f8483f19add2da9fa5e12807294e4b 164 Gene3D G3DSA:3.30.565.10 4 157 1.7E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_20085 f4f8483f19add2da9fa5e12807294e4b 164 SUPERFAMILY SSF55874 31 145 4.07E-8 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_17995 6369e49dc98af729696b59127feafea0 378 Gene3D G3DSA:3.90.226.10 5 375 2.0E-109 T 14-10-2018 DA442_17995 6369e49dc98af729696b59127feafea0 378 Pfam PF16113 Enoyl-CoA hydratase/isomerase 19 358 1.0E-103 T 14-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 DA442_17995 6369e49dc98af729696b59127feafea0 378 SUPERFAMILY SSF52096 16 340 5.18E-52 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DA442_06095 366db626e3ed41576e9c1cb08f473d4c 310 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 25 310 1.1E-177 T 14-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 DA442_06095 366db626e3ed41576e9c1cb08f473d4c 310 SUPERFAMILY SSF53335 9 287 2.76E-52 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_06095 366db626e3ed41576e9c1cb08f473d4c 310 Gene3D G3DSA:3.40.50.150 79 298 1.4E-46 T 14-10-2018 DA442_14700 fee8dc05048b902085966dc663b6ed9d 345 Gene3D G3DSA:3.40.50.720 3 332 1.0E-127 T 14-10-2018 DA442_14700 fee8dc05048b902085966dc663b6ed9d 345 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 3 332 6.6E-190 T 14-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 DA442_14700 fee8dc05048b902085966dc663b6ed9d 345 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 109 1.1E-31 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_14700 fee8dc05048b902085966dc663b6ed9d 345 SUPERFAMILY SSF55347 159 321 6.55E-59 T 14-10-2018 DA442_14700 fee8dc05048b902085966dc663b6ed9d 345 PIRSF PIRSF000149 1 342 5.9E-127 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_14700 fee8dc05048b902085966dc663b6ed9d 345 SUPERFAMILY SSF51735 2 183 3.39E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_14700 fee8dc05048b902085966dc663b6ed9d 345 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 1 341 65.903 T 14-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 DA442_14700 fee8dc05048b902085966dc663b6ed9d 345 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 164 320 1.2E-55 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_14700 fee8dc05048b902085966dc663b6ed9d 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 116 129 1.6E-30 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_14700 fee8dc05048b902085966dc663b6ed9d 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 276 291 1.6E-30 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_14700 fee8dc05048b902085966dc663b6ed9d 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 153 171 1.6E-30 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_14700 fee8dc05048b902085966dc663b6ed9d 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 236 253 1.6E-30 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_14700 fee8dc05048b902085966dc663b6ed9d 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 180 196 1.6E-30 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_14700 fee8dc05048b902085966dc663b6ed9d 345 SMART SM00846 2 159 1.9E-73 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DA442_14700 fee8dc05048b902085966dc663b6ed9d 345 Gene3D G3DSA:3.30.360.10 158 322 1.0E-127 T 14-10-2018 DA442_15720 445e4e1a7cd80b4ad7b41193e24e498d 158 Gene3D G3DSA:1.20.1260.10 1 158 1.1E-71 T 14-10-2018 IPR012347 Ferritin-like DA442_15720 445e4e1a7cd80b4ad7b41193e24e498d 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 157 2.3E-82 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DA442_15720 445e4e1a7cd80b4ad7b41193e24e498d 158 PRINTS PR00601 Bacterioferritin signature 23 43 1.1E-72 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DA442_15720 445e4e1a7cd80b4ad7b41193e24e498d 158 PRINTS PR00601 Bacterioferritin signature 86 106 1.1E-72 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DA442_15720 445e4e1a7cd80b4ad7b41193e24e498d 158 PRINTS PR00601 Bacterioferritin signature 44 64 1.1E-72 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DA442_15720 445e4e1a7cd80b4ad7b41193e24e498d 158 PRINTS PR00601 Bacterioferritin signature 107 127 1.1E-72 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DA442_15720 445e4e1a7cd80b4ad7b41193e24e498d 158 PRINTS PR00601 Bacterioferritin signature 3 22 1.1E-72 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DA442_15720 445e4e1a7cd80b4ad7b41193e24e498d 158 PRINTS PR00601 Bacterioferritin signature 65 85 1.1E-72 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DA442_15720 445e4e1a7cd80b4ad7b41193e24e498d 158 PRINTS PR00601 Bacterioferritin signature 128 149 1.1E-72 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DA442_15720 445e4e1a7cd80b4ad7b41193e24e498d 158 SUPERFAMILY SSF47240 1 153 1.52E-55 T 14-10-2018 IPR009078 Ferritin-like superfamily DA442_15720 445e4e1a7cd80b4ad7b41193e24e498d 158 PIRSF PIRSF002560 1 157 8.8E-74 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DA442_15720 445e4e1a7cd80b4ad7b41193e24e498d 158 Pfam PF00210 Ferritin-like domain 8 143 1.9E-40 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 DA442_15720 445e4e1a7cd80b4ad7b41193e24e498d 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 DA442_13495 3d5cf237886852993a08e13ae41a9998 306 Pfam PF13737 Transposase DDE domain 19 129 6.9E-45 T 14-10-2018 IPR025668 Transposase DDE domain DA442_05320 022fe70a78ce1153e1ba9525e10847b2 236 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 236 91.79 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 DA442_05320 022fe70a78ce1153e1ba9525e10847b2 236 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 36 204 5.7E-69 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 DA442_05320 022fe70a78ce1153e1ba9525e10847b2 236 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 37 216 3.0E-75 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 DA442_05320 022fe70a78ce1153e1ba9525e10847b2 236 SUPERFAMILY SSF55729 5 229 2.01E-87 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_05320 022fe70a78ce1153e1ba9525e10847b2 236 Gene3D G3DSA:3.40.630.70 63 236 2.7E-63 T 14-10-2018 DA442_05320 022fe70a78ce1153e1ba9525e10847b2 236 Gene3D G3DSA:2.30.210.20 5 62 1.2E-22 T 14-10-2018 DA442_00485 8bcf1f60b4c156a3e0d585d926f48a4d 302 SUPERFAMILY SSF103481 65 144 1.16E-11 T 14-10-2018 DA442_00485 8bcf1f60b4c156a3e0d585d926f48a4d 302 SUPERFAMILY SSF103481 189 289 3.01E-10 T 14-10-2018 DA442_00485 8bcf1f60b4c156a3e0d585d926f48a4d 302 Pfam PF00892 EamA-like transporter family 155 286 5.4E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DA442_00485 8bcf1f60b4c156a3e0d585d926f48a4d 302 Pfam PF00892 EamA-like transporter family 9 141 6.6E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DA442_23395 aa3586168c62ae21672b39e21b8c05cd 231 Gene3D G3DSA:2.60.120.10 7 231 7.0E-85 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DA442_23395 aa3586168c62ae21672b39e21b8c05cd 231 Pfam PF02678 Pirin 11 119 1.7E-33 T 14-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 DA442_23395 aa3586168c62ae21672b39e21b8c05cd 231 SUPERFAMILY SSF51182 1 230 6.41E-71 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DA442_23395 aa3586168c62ae21672b39e21b8c05cd 231 Gene3D G3DSA:2.60.120.10 11 135 7.0E-85 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DA442_23395 aa3586168c62ae21672b39e21b8c05cd 231 PIRSF PIRSF006232 1 228 7.9E-55 T 14-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 DA442_23560 1fd6ee4d63f5fd2479bd2dd729c82569 622 Gene3D G3DSA:2.60.120.10 5 142 3.0E-11 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DA442_23560 1fd6ee4d63f5fd2479bd2dd729c82569 622 Pfam PF03445 Putative nucleotidyltransferase DUF294 303 436 4.1E-46 T 14-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 DA442_23560 1fd6ee4d63f5fd2479bd2dd729c82569 622 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 475 618 7.7E-45 T 14-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding DA442_23560 1fd6ee4d63f5fd2479bd2dd729c82569 622 SUPERFAMILY SSF51206 9 133 4.32E-13 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like DA442_23560 1fd6ee4d63f5fd2479bd2dd729c82569 622 SUPERFAMILY SSF54631 157 274 1.17E-25 T 14-10-2018 DA442_23560 1fd6ee4d63f5fd2479bd2dd729c82569 622 SMART SM00116 230 277 6.3E-7 T 14-10-2018 IPR000644 CBS domain DA442_23560 1fd6ee4d63f5fd2479bd2dd729c82569 622 SMART SM00116 165 213 5.5 T 14-10-2018 IPR000644 CBS domain DA442_23560 1fd6ee4d63f5fd2479bd2dd729c82569 622 Gene3D G3DSA:3.10.580.10 149 309 1.8E-26 T 14-10-2018 DA442_23560 1fd6ee4d63f5fd2479bd2dd729c82569 622 Pfam PF00571 CBS domain 224 273 2.2E-7 T 14-10-2018 IPR000644 CBS domain DA442_23560 1fd6ee4d63f5fd2479bd2dd729c82569 622 Pfam PF00571 CBS domain 158 210 3.8E-5 T 14-10-2018 IPR000644 CBS domain DA442_21575 d10808225eae68a6901af22ca6dd7bfc 216 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 79 182 6.0E-18 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DA442_21575 d10808225eae68a6901af22ca6dd7bfc 216 Gene3D G3DSA:3.40.50.1000 4 190 3.7E-51 T 14-10-2018 IPR023214 HAD superfamily DA442_21575 d10808225eae68a6901af22ca6dd7bfc 216 SUPERFAMILY SSF56784 1 213 2.76E-53 T 14-10-2018 IPR036412 HAD-like superfamily DA442_21575 d10808225eae68a6901af22ca6dd7bfc 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 5.1E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DA442_21575 d10808225eae68a6901af22ca6dd7bfc 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 5.1E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DA442_21575 d10808225eae68a6901af22ca6dd7bfc 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 5.1E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DA442_21575 d10808225eae68a6901af22ca6dd7bfc 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 5.1E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DA442_21575 d10808225eae68a6901af22ca6dd7bfc 216 Gene3D G3DSA:1.10.150.240 16 84 3.7E-51 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DA442_21575 d10808225eae68a6901af22ca6dd7bfc 216 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 181 2.9E-33 T 14-10-2018 DA442_04580 d4585345e38f05fdd934d0c509ea6a82 323 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 24 321 5.2E-111 T 14-10-2018 IPR011970 Lytic murein transglycosylase DA442_04580 d4585345e38f05fdd934d0c509ea6a82 323 Pfam PF13406 Transglycosylase SLT domain 24 319 2.7E-110 T 14-10-2018 IPR031304 Transglycosylase SLT domain 2 DA442_04580 d4585345e38f05fdd934d0c509ea6a82 323 SUPERFAMILY SSF53955 12 321 6.67E-101 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily DA442_04580 d4585345e38f05fdd934d0c509ea6a82 323 Gene3D G3DSA:1.10.530.10 66 318 3.7E-93 T 14-10-2018 DA442_04580 d4585345e38f05fdd934d0c509ea6a82 323 Gene3D G3DSA:1.10.8.350 35 199 3.7E-93 T 14-10-2018 DA442_11585 2a4e989354cda5a2f53c15715bc70d3f 213 Gene3D G3DSA:3.40.50.300 3 213 1.5E-60 T 14-10-2018 DA442_11585 2a4e989354cda5a2f53c15715bc70d3f 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 9 198 1.3E-41 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 DA442_11585 2a4e989354cda5a2f53c15715bc70d3f 213 TIGRFAM TIGR00235 udk: uridine kinase 3 211 6.2E-90 T 14-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 DA442_11585 2a4e989354cda5a2f53c15715bc70d3f 213 SUPERFAMILY SSF52540 6 204 1.31E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_11585 2a4e989354cda5a2f53c15715bc70d3f 213 PRINTS PR00988 Uridine kinase signature 178 191 2.5E-36 T 14-10-2018 DA442_11585 2a4e989354cda5a2f53c15715bc70d3f 213 PRINTS PR00988 Uridine kinase signature 156 167 2.5E-36 T 14-10-2018 DA442_11585 2a4e989354cda5a2f53c15715bc70d3f 213 PRINTS PR00988 Uridine kinase signature 142 152 2.5E-36 T 14-10-2018 DA442_11585 2a4e989354cda5a2f53c15715bc70d3f 213 PRINTS PR00988 Uridine kinase signature 41 52 2.5E-36 T 14-10-2018 DA442_11585 2a4e989354cda5a2f53c15715bc70d3f 213 PRINTS PR00988 Uridine kinase signature 7 24 2.5E-36 T 14-10-2018 DA442_11585 2a4e989354cda5a2f53c15715bc70d3f 213 PRINTS PR00988 Uridine kinase signature 86 101 2.5E-36 T 14-10-2018 DA442_11585 2a4e989354cda5a2f53c15715bc70d3f 213 Hamap MF_00551 Uridine kinase [udk]. 4 212 39.464 T 14-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 DA442_04075 2208b34fbf81bbe6e92500a14d69e2ff 275 Gene3D G3DSA:1.10.155.10 1 74 1.3E-10 T 14-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily DA442_04075 2208b34fbf81bbe6e92500a14d69e2ff 275 Gene3D G3DSA:3.40.50.150 75 274 4.8E-60 T 14-10-2018 DA442_04075 2208b34fbf81bbe6e92500a14d69e2ff 275 Pfam PF03705 CheR methyltransferase, all-alpha domain 9 55 7.1E-10 T 14-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal DA442_04075 2208b34fbf81bbe6e92500a14d69e2ff 275 Pfam PF01739 CheR methyltransferase, SAM binding domain 76 269 2.7E-68 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal DA442_04075 2208b34fbf81bbe6e92500a14d69e2ff 275 SMART SM00138 8 272 7.4E-131 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DA442_04075 2208b34fbf81bbe6e92500a14d69e2ff 275 SUPERFAMILY SSF53335 76 269 2.37E-50 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_04075 2208b34fbf81bbe6e92500a14d69e2ff 275 SUPERFAMILY SSF47757 3 75 2.48E-14 T 14-10-2018 DA442_04075 2208b34fbf81bbe6e92500a14d69e2ff 275 PRINTS PR00996 Glutamate methyltransferase family signature 143 159 1.3E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DA442_04075 2208b34fbf81bbe6e92500a14d69e2ff 275 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 1.3E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DA442_04075 2208b34fbf81bbe6e92500a14d69e2ff 275 PRINTS PR00996 Glutamate methyltransferase family signature 231 254 1.3E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DA442_04075 2208b34fbf81bbe6e92500a14d69e2ff 275 PRINTS PR00996 Glutamate methyltransferase family signature 212 226 1.3E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DA442_04075 2208b34fbf81bbe6e92500a14d69e2ff 275 PRINTS PR00996 Glutamate methyltransferase family signature 69 81 1.3E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DA442_04075 2208b34fbf81bbe6e92500a14d69e2ff 275 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 1.3E-43 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DA442_23125 ecc86e4d1fe95258ef8ddbd8e511a285 541 PIRSF PIRSF002741 1 541 2.2E-113 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DA442_23125 ecc86e4d1fe95258ef8ddbd8e511a285 541 Gene3D G3DSA:3.10.105.10 296 511 9.3E-183 T 14-10-2018 DA442_23125 ecc86e4d1fe95258ef8ddbd8e511a285 541 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 87 108 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site DA442_23125 ecc86e4d1fe95258ef8ddbd8e511a285 541 SUPERFAMILY SSF53850 36 533 1.78E-141 T 14-10-2018 DA442_23125 ecc86e4d1fe95258ef8ddbd8e511a285 541 Gene3D G3DSA:3.40.190.10 41 523 9.3E-183 T 14-10-2018 DA442_23125 ecc86e4d1fe95258ef8ddbd8e511a285 541 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 82 462 3.0E-86 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain DA442_23125 ecc86e4d1fe95258ef8ddbd8e511a285 541 Gene3D G3DSA:3.90.76.10 71 194 9.3E-183 T 14-10-2018 DA442_05600 2e8cf26a859e1f0fa28a0f06657a3fe0 545 SUPERFAMILY SSF58104 236 545 8.76E-76 T 14-10-2018 DA442_05600 2e8cf26a859e1f0fa28a0f06657a3fe0 545 Gene3D G3DSA:1.10.287.950 214 545 2.8E-75 T 14-10-2018 DA442_05600 2e8cf26a859e1f0fa28a0f06657a3fe0 545 Pfam PF00672 HAMP domain 214 264 1.6E-13 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_05600 2e8cf26a859e1f0fa28a0f06657a3fe0 545 SMART SM00283 283 544 1.0E-74 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_05600 2e8cf26a859e1f0fa28a0f06657a3fe0 545 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 345 510 4.2E-43 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_05600 2e8cf26a859e1f0fa28a0f06657a3fe0 545 SMART SM00304 214 268 1.8E-16 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_05600 2e8cf26a859e1f0fa28a0f06657a3fe0 545 SMART SM00304 303 356 53.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_07515 d474e272b7723d86b2623b041d01c8d8 1580 SUPERFAMILY SSF103088 609 720 9.94E-17 T 14-10-2018 IPR036737 OmpA-like domain superfamily DA442_07515 d474e272b7723d86b2623b041d01c8d8 1580 Gene3D G3DSA:3.30.1330.60 593 721 1.7E-17 T 14-10-2018 IPR036737 OmpA-like domain superfamily DA442_07515 d474e272b7723d86b2623b041d01c8d8 1580 Pfam PF00691 OmpA family 609 706 8.1E-14 T 14-10-2018 IPR006665 OmpA-like domain DA442_25610 d4ffbbf6bda0d46ef375a46206b8dfc0 315 SUPERFAMILY SSF56219 81 310 1.06E-24 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DA442_25610 d4ffbbf6bda0d46ef375a46206b8dfc0 315 Gene3D G3DSA:3.60.10.10 88 313 5.9E-21 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DA442_25610 d4ffbbf6bda0d46ef375a46206b8dfc0 315 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 94 282 1.2E-7 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase DA442_05375 3de17b4415c9331de5f35d1839ed939a 334 SUPERFAMILY SSF47413 1 59 6.95E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DA442_05375 3de17b4415c9331de5f35d1839ed939a 334 Pfam PF13377 Periplasmic binding protein-like domain 170 330 7.2E-43 T 14-10-2018 DA442_05375 3de17b4415c9331de5f35d1839ed939a 334 Gene3D G3DSA:3.40.50.2300 69 322 7.3E-92 T 14-10-2018 DA442_05375 3de17b4415c9331de5f35d1839ed939a 334 Gene3D G3DSA:3.40.50.2300 161 323 7.3E-92 T 14-10-2018 DA442_05375 3de17b4415c9331de5f35d1839ed939a 334 SMART SM00354 1 71 1.3E-38 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DA442_05375 3de17b4415c9331de5f35d1839ed939a 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.0E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DA442_05375 3de17b4415c9331de5f35d1839ed939a 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.0E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DA442_05375 3de17b4415c9331de5f35d1839ed939a 334 SUPERFAMILY SSF53822 60 331 2.94E-94 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DA442_05375 3de17b4415c9331de5f35d1839ed939a 334 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 334 62.832 T 14-10-2018 IPR023588 Transcription regulator HTH, PurR GO:0006355 DA442_05375 3de17b4415c9331de5f35d1839ed939a 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.8E-21 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DA442_05375 3de17b4415c9331de5f35d1839ed939a 334 Gene3D G3DSA:1.10.260.40 3 59 9.1E-25 T 14-10-2018 DA442_05375 3de17b4415c9331de5f35d1839ed939a 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 DA442_13075 3252789cee0be81f8b14e4e0cd263587 445 SUPERFAMILY SSF53633 4 294 1.96E-67 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DA442_13075 3252789cee0be81f8b14e4e0cd263587 445 PIRSF PIRSF000423 1 445 4.2E-204 T 14-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 DA442_13075 3252789cee0be81f8b14e4e0cd263587 445 Gene3D G3DSA:3.40.1160.10 7 296 1.1E-84 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DA442_13075 3252789cee0be81f8b14e4e0cd263587 445 Pfam PF00583 Acetyltransferase (GNAT) family 334 417 2.3E-8 T 14-10-2018 IPR000182 GNAT domain DA442_13075 3252789cee0be81f8b14e4e0cd263587 445 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 8 444 5.5E-201 T 14-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 DA442_13075 3252789cee0be81f8b14e4e0cd263587 445 Pfam PF00696 Amino acid kinase family 25 270 2.7E-29 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DA442_13075 3252789cee0be81f8b14e4e0cd263587 445 Gene3D G3DSA:3.40.630.30 297 445 4.4E-37 T 14-10-2018 DA442_13075 3252789cee0be81f8b14e4e0cd263587 445 SUPERFAMILY SSF55729 300 425 1.66E-17 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_13075 3252789cee0be81f8b14e4e0cd263587 445 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 445 223.769 T 14-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 DA442_05190 151427944effd2c345b9a706a87e26bf 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 239 1.3E-108 T 14-10-2018 IPR012838 Pyruvate formate-lyase 1 activating enzyme GO:0043365|GO:0055114 DA442_05190 151427944effd2c345b9a706a87e26bf 246 Pfam PF13353 4Fe-4S single cluster domain 16 137 7.7E-21 T 14-10-2018 DA442_05190 151427944effd2c345b9a706a87e26bf 246 SUPERFAMILY SSF102114 23 220 4.32E-30 T 14-10-2018 DA442_05190 151427944effd2c345b9a706a87e26bf 246 Gene3D G3DSA:3.20.20.70 2 246 1.6E-105 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_05190 151427944effd2c345b9a706a87e26bf 246 Pfam PF04055 Radical SAM superfamily 24 178 5.5E-33 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DA442_05190 151427944effd2c345b9a706a87e26bf 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 14-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 DA442_05190 151427944effd2c345b9a706a87e26bf 246 PIRSF PIRSF000371 44 245 1.9E-44 T 14-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 DA442_05190 151427944effd2c345b9a706a87e26bf 246 PIRSF PIRSF000371 1 48 2.0E-11 T 14-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 DA442_18725 eca1e4f314a9267f219cc1c43995c62d 156 SMART SM00953 15 143 1.6E-15 T 14-10-2018 IPR014914 RES domain DA442_18725 eca1e4f314a9267f219cc1c43995c62d 156 Pfam PF08808 RES domain 2 151 4.3E-26 T 14-10-2018 IPR014914 RES domain DA442_14130 263ae69592a8e0cbfd5f39542ed8fb74 148 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 25 147 29.552 T 14-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 DA442_14130 263ae69592a8e0cbfd5f39542ed8fb74 148 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 108 140 4.4E-10 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 DA442_14130 263ae69592a8e0cbfd5f39542ed8fb74 148 SUPERFAMILY SSF109635 8 107 1.7E-36 T 14-10-2018 IPR037187 DksA, N-terminal domain superfamily DA442_14130 263ae69592a8e0cbfd5f39542ed8fb74 148 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 29 137 7.7E-51 T 14-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 DA442_14130 263ae69592a8e0cbfd5f39542ed8fb74 148 Gene3D G3DSA:1.20.120.910 17 147 3.2E-36 T 14-10-2018 DA442_14130 263ae69592a8e0cbfd5f39542ed8fb74 148 SUPERFAMILY SSF57716 108 146 6.41E-10 T 14-10-2018 DA442_14130 263ae69592a8e0cbfd5f39542ed8fb74 148 PRINTS PR00618 DksA/TraR zinc finger signature 111 122 8.9E-5 T 14-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria DA442_14130 263ae69592a8e0cbfd5f39542ed8fb74 148 PRINTS PR00618 DksA/TraR zinc finger signature 123 135 8.9E-5 T 14-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria DA442_14130 263ae69592a8e0cbfd5f39542ed8fb74 148 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 111 135 - T 14-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site DA442_15035 cca6c06d9dca88d6a1946087d715b84c 149 SUPERFAMILY SSF102400 1 145 4.45E-42 T 14-10-2018 IPR036768 DNA polymerase III subunit chi superfamily DA442_15035 cca6c06d9dca88d6a1946087d715b84c 149 Gene3D G3DSA:3.40.50.10110 1 146 4.9E-43 T 14-10-2018 IPR036768 DNA polymerase III subunit chi superfamily DA442_15035 cca6c06d9dca88d6a1946087d715b84c 149 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 142 5.2E-33 T 14-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 DA442_08440 7628be1129e5a72ec7c4479b5f7aa499 165 Pfam PF14539 Domain of unknown function (DUF4442) 18 105 3.0E-10 T 14-10-2018 IPR027961 Protein of unknown function DUF4442 DA442_08440 7628be1129e5a72ec7c4479b5f7aa499 165 Gene3D G3DSA:3.10.129.10 5 136 1.6E-25 T 14-10-2018 DA442_08440 7628be1129e5a72ec7c4479b5f7aa499 165 SUPERFAMILY SSF54637 12 126 6.34E-15 T 14-10-2018 IPR029069 HotDog domain superfamily DA442_11630 fd889238c83aaad77099956b4fdf8792 486 SUPERFAMILY SSF55073 337 486 5.1E-37 T 14-10-2018 IPR029787 Nucleotide cyclase DA442_11630 fd889238c83aaad77099956b4fdf8792 486 SMART SM00267 321 486 8.5E-40 T 14-10-2018 IPR000160 GGDEF domain DA442_11630 fd889238c83aaad77099956b4fdf8792 486 Pfam PF00990 Diguanylate cyclase, GGDEF domain 332 483 2.3E-37 T 14-10-2018 IPR000160 GGDEF domain DA442_11630 fd889238c83aaad77099956b4fdf8792 486 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 330 484 2.4E-42 T 14-10-2018 IPR000160 GGDEF domain DA442_11630 fd889238c83aaad77099956b4fdf8792 486 Gene3D G3DSA:3.30.70.270 319 486 9.2E-46 T 14-10-2018 DA442_01200 302375401e0ce13a0d009d48a3bc358a 890 Pfam PF02563 Polysaccharide biosynthesis/export protein 117 179 2.0E-13 T 14-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 DA442_01200 302375401e0ce13a0d009d48a3bc358a 890 Pfam PF10531 SLBB domain 198 246 3.9E-8 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DA442_01200 302375401e0ce13a0d009d48a3bc358a 890 Pfam PF10531 SLBB domain 558 602 7.6E-8 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DA442_01200 302375401e0ce13a0d009d48a3bc358a 890 Pfam PF10531 SLBB domain 281 324 9.6E-11 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DA442_01200 302375401e0ce13a0d009d48a3bc358a 890 Gene3D G3DSA:3.10.560.10 190 276 2.4E-18 T 14-10-2018 DA442_01200 302375401e0ce13a0d009d48a3bc358a 890 Gene3D G3DSA:3.10.560.10 358 450 1.1E-7 T 14-10-2018 DA442_01200 302375401e0ce13a0d009d48a3bc358a 890 Gene3D G3DSA:3.10.560.10 543 641 1.8E-12 T 14-10-2018 DA442_01200 302375401e0ce13a0d009d48a3bc358a 890 Gene3D G3DSA:3.10.560.10 783 861 4.7E-11 T 14-10-2018 DA442_01200 302375401e0ce13a0d009d48a3bc358a 890 Gene3D G3DSA:3.10.560.10 277 357 9.9E-14 T 14-10-2018 DA442_01200 302375401e0ce13a0d009d48a3bc358a 890 SUPERFAMILY SSF142984 652 688 9.42E-5 T 14-10-2018 DA442_01200 302375401e0ce13a0d009d48a3bc358a 890 Pfam PF06251 Capsule biosynthesis GfcC 662 863 1.6E-11 T 14-10-2018 IPR010425 Domain of unknown function DUF1017 DA442_01200 302375401e0ce13a0d009d48a3bc358a 890 Gene3D G3DSA:3.30.1950.10 123 189 2.2E-5 T 14-10-2018 DA442_13340 c1e9c48c2f0f9db262491d1215cffdc7 438 SUPERFAMILY SSF52540 148 425 8.07E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_13340 c1e9c48c2f0f9db262491d1215cffdc7 438 SMART SM00382 167 358 0.0039 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_07580 95f619a8202fe4e1955f708c6202155f 154 Gene3D G3DSA:3.10.450.40 18 135 2.1E-10 T 14-10-2018 DA442_07580 95f619a8202fe4e1955f708c6202155f 154 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 24 154 8.2E-38 T 14-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein DA442_07580 95f619a8202fe4e1955f708c6202155f 154 Pfam PF04965 Gene 25-like lysozyme 46 133 2.4E-17 T 14-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD DA442_07580 95f619a8202fe4e1955f708c6202155f 154 SUPERFAMILY SSF160719 46 149 1.83E-19 T 14-10-2018 DA442_18895 ec14fec0b07769ea014c2584e647e6f0 207 SUPERFAMILY SSF47413 26 90 1.47E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DA442_18895 ec14fec0b07769ea014c2584e647e6f0 207 SUPERFAMILY SSF51182 97 204 1.44E-25 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DA442_18895 ec14fec0b07769ea014c2584e647e6f0 207 Gene3D G3DSA:2.60.120.10 94 205 1.7E-26 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DA442_18895 ec14fec0b07769ea014c2584e647e6f0 207 Pfam PF07883 Cupin domain 147 204 1.1E-10 T 14-10-2018 IPR013096 Cupin 2, conserved barrel DA442_18895 ec14fec0b07769ea014c2584e647e6f0 207 Pfam PF01381 Helix-turn-helix 32 84 1.4E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DA442_18895 ec14fec0b07769ea014c2584e647e6f0 207 SMART SM00530 31 86 1.3E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DA442_18895 ec14fec0b07769ea014c2584e647e6f0 207 Gene3D G3DSA:1.10.260.40 26 93 2.5E-15 T 14-10-2018 DA442_02010 dc811ace3ce59e3ba274a5a8608da406 267 Pfam PF03180 NLPA lipoprotein 31 267 2.9E-87 T 14-10-2018 IPR004872 Lipoprotein NlpA family DA442_02010 dc811ace3ce59e3ba274a5a8608da406 267 Gene3D G3DSA:3.40.190.10 32 262 6.7E-93 T 14-10-2018 DA442_02010 dc811ace3ce59e3ba274a5a8608da406 267 Gene3D G3DSA:3.40.190.10 112 217 6.7E-93 T 14-10-2018 DA442_02010 dc811ace3ce59e3ba274a5a8608da406 267 PIRSF PIRSF002854 3 267 3.0E-89 T 14-10-2018 IPR004872 Lipoprotein NlpA family DA442_02010 dc811ace3ce59e3ba274a5a8608da406 267 SUPERFAMILY SSF53850 31 267 5.0E-83 T 14-10-2018 DA442_17980 5ab9432af01c3fbb3267dc5b2c17bbfb 497 Pfam PF00171 Aldehyde dehydrogenase family 14 477 4.5E-136 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DA442_17980 5ab9432af01c3fbb3267dc5b2c17bbfb 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DA442_17980 5ab9432af01c3fbb3267dc5b2c17bbfb 497 SUPERFAMILY SSF53720 2 484 3.53E-142 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DA442_17980 5ab9432af01c3fbb3267dc5b2c17bbfb 497 Gene3D G3DSA:3.40.605.10 24 458 3.2E-141 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DA442_17980 5ab9432af01c3fbb3267dc5b2c17bbfb 497 Gene3D G3DSA:3.40.309.10 250 450 3.2E-141 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DA442_17980 5ab9432af01c3fbb3267dc5b2c17bbfb 497 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 6 481 4.6E-238 T 14-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 DA442_08645 6077c4a9f014a445a4ce5e3d0c5385a2 166 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 22 157 2.5E-16 T 14-10-2018 IPR009936 Protein of unknown function DUF1468 DA442_18540 9274c824e347e0c69885fc3ced5db6e2 284 Gene3D G3DSA:3.40.190.10 108 271 6.1E-18 T 14-10-2018 DA442_18540 9274c824e347e0c69885fc3ced5db6e2 284 Gene3D G3DSA:3.40.190.10 153 249 6.1E-18 T 14-10-2018 DA442_18540 9274c824e347e0c69885fc3ced5db6e2 284 Gene3D G3DSA:1.10.10.10 1 87 1.3E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_18540 9274c824e347e0c69885fc3ced5db6e2 284 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 3.6E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_18540 9274c824e347e0c69885fc3ced5db6e2 284 SUPERFAMILY SSF53850 104 276 4.34E-23 T 14-10-2018 DA442_18540 9274c824e347e0c69885fc3ced5db6e2 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 5.6E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_18540 9274c824e347e0c69885fc3ced5db6e2 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 5.6E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_18540 9274c824e347e0c69885fc3ced5db6e2 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 5.6E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_18540 9274c824e347e0c69885fc3ced5db6e2 284 Pfam PF03466 LysR substrate binding domain 114 277 1.0E-9 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_18540 9274c824e347e0c69885fc3ced5db6e2 284 SUPERFAMILY SSF46785 3 85 1.21E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_24245 8cb2492089610ff5a013ae56064a5a6b 514 Gene3D G3DSA:1.10.10.1710 448 513 3.6E-25 T 14-10-2018 DA442_24245 8cb2492089610ff5a013ae56064a5a6b 514 Gene3D G3DSA:1.10.579.10 327 447 5.6E-54 T 14-10-2018 DA442_24245 8cb2492089610ff5a013ae56064a5a6b 514 Gene3D G3DSA:1.25.40.80 132 323 1.3E-99 T 14-10-2018 DA442_24245 8cb2492089610ff5a013ae56064a5a6b 514 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 7 223 7.9E-65 T 14-10-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein DA442_24245 8cb2492089610ff5a013ae56064a5a6b 514 Gene3D G3DSA:3.40.50.620 8 230 1.3E-99 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DA442_24245 8cb2492089610ff5a013ae56064a5a6b 514 SUPERFAMILY SSF48173 229 500 2.35E-63 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 DA442_01755 077711d03c0050bada1b5a44f0618de8 156 SUPERFAMILY SSF55252 82 151 3.92E-19 T 14-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 DA442_01755 077711d03c0050bada1b5a44f0618de8 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 10 151 5.4E-44 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 DA442_01755 077711d03c0050bada1b5a44f0618de8 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 59.828 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 DA442_01755 077711d03c0050bada1b5a44f0618de8 156 Gene3D G3DSA:3.30.1360.40 75 156 5.6E-34 T 14-10-2018 DA442_01755 077711d03c0050bada1b5a44f0618de8 156 SUPERFAMILY SSF46785 3 77 3.36E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_01755 077711d03c0050bada1b5a44f0618de8 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 1.7E-24 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 DA442_01755 077711d03c0050bada1b5a44f0618de8 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 1.7E-24 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 DA442_01755 077711d03c0050bada1b5a44f0618de8 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 1.7E-24 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 DA442_01755 077711d03c0050bada1b5a44f0618de8 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 1.7E-24 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 DA442_01755 077711d03c0050bada1b5a44f0618de8 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 147 8.8E-22 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 DA442_01755 077711d03c0050bada1b5a44f0618de8 156 Gene3D G3DSA:1.10.10.10 1 74 7.9E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_01755 077711d03c0050bada1b5a44f0618de8 156 Pfam PF01316 Arginine repressor, DNA binding domain 6 74 8.6E-24 T 14-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 DA442_01755 077711d03c0050bada1b5a44f0618de8 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 146 2.0E-20 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 DA442_05810 f1555e0b3ce263e2b1f956825af51d6b 374 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 7 365 1.5E-152 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 DA442_05810 f1555e0b3ce263e2b1f956825af51d6b 374 Gene3D G3DSA:2.30.30.280 216 286 1.0E-24 T 14-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 DA442_05810 f1555e0b3ce263e2b1f956825af51d6b 374 Gene3D G3DSA:2.40.30.10 287 372 8.6E-34 T 14-10-2018 DA442_05810 f1555e0b3ce263e2b1f956825af51d6b 374 SUPERFAMILY SSF52402 5 247 1.15E-56 T 14-10-2018 DA442_05810 f1555e0b3ce263e2b1f956825af51d6b 374 Pfam PF03054 tRNA methyl transferase 7 365 3.0E-142 T 14-10-2018 DA442_05810 f1555e0b3ce263e2b1f956825af51d6b 374 Gene3D G3DSA:3.40.50.620 1 214 6.6E-95 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DA442_05810 f1555e0b3ce263e2b1f956825af51d6b 374 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 366 39.944 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 DA442_03920 9c667ce7d27ec7c3d62b6439620802ad 127 PIRSF PIRSF005610 1 121 1.5E-19 T 14-10-2018 IPR007360 Invasion gene expression up-regulator, SirB DA442_03920 9c667ce7d27ec7c3d62b6439620802ad 127 Pfam PF04247 Invasion gene expression up-regulator, SirB 2 123 1.8E-39 T 14-10-2018 IPR007360 Invasion gene expression up-regulator, SirB DA442_06170 b5d7b223fe3c51bab984988e91556d03 198 Pfam PF00072 Response regulator receiver domain 9 117 6.8E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_06170 b5d7b223fe3c51bab984988e91556d03 198 Gene3D G3DSA:1.10.10.10 138 196 1.0E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_06170 b5d7b223fe3c51bab984988e91556d03 198 Pfam PF00196 Bacterial regulatory proteins, luxR family 138 193 4.4E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_06170 b5d7b223fe3c51bab984988e91556d03 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 182 1.4E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_06170 b5d7b223fe3c51bab984988e91556d03 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 170 1.4E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_06170 b5d7b223fe3c51bab984988e91556d03 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 140 154 1.4E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_06170 b5d7b223fe3c51bab984988e91556d03 198 SUPERFAMILY SSF52172 10 142 1.57E-31 T 14-10-2018 IPR011006 CheY-like superfamily DA442_06170 b5d7b223fe3c51bab984988e91556d03 198 SMART SM00448 6 117 1.1E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_06170 b5d7b223fe3c51bab984988e91556d03 198 Gene3D G3DSA:3.40.50.2300 3 134 4.7E-35 T 14-10-2018 DA442_06170 b5d7b223fe3c51bab984988e91556d03 198 SMART SM00421 137 194 8.1E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_06170 b5d7b223fe3c51bab984988e91556d03 198 SUPERFAMILY SSF46894 134 193 2.45E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DA442_12630 57a859f97ba349c417c305de94ef23fe 215 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 192 1.5E-76 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 DA442_12630 57a859f97ba349c417c305de94ef23fe 215 SUPERFAMILY SSF53328 2 202 2.49E-65 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DA442_12630 57a859f97ba349c417c305de94ef23fe 215 Gene3D G3DSA:3.40.50.170 2 213 2.1E-83 T 14-10-2018 DA442_12630 57a859f97ba349c417c305de94ef23fe 215 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 30.55 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 DA442_12630 57a859f97ba349c417c305de94ef23fe 215 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 14-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DA442_12630 57a859f97ba349c417c305de94ef23fe 215 Pfam PF00551 Formyl transferase 2 181 9.9E-62 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DA442_00045 e55b587b3f3860f921a98e72496b65fd 417 Pfam PF00155 Aminotransferase class I and II 68 401 3.7E-26 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DA442_00045 e55b587b3f3860f921a98e72496b65fd 417 Gene3D G3DSA:3.40.640.10 1 415 8.6E-150 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_00045 e55b587b3f3860f921a98e72496b65fd 417 SUPERFAMILY SSF53383 13 411 2.82E-61 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_01360 12d93905cda2ce757db85ec9aaf4e5f8 335 SUPERFAMILY SSF56655 1 324 5.74E-106 T 14-10-2018 DA442_01360 12d93905cda2ce757db85ec9aaf4e5f8 335 Gene3D G3DSA:3.30.540.10 7 319 3.9E-124 T 14-10-2018 DA442_01360 12d93905cda2ce757db85ec9aaf4e5f8 335 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 321 1.5E-127 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 DA442_01360 12d93905cda2ce757db85ec9aaf4e5f8 335 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 329 2.5E-165 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 DA442_01360 12d93905cda2ce757db85ec9aaf4e5f8 335 PIRSF PIRSF004532 1 331 1.0E-134 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 DA442_01360 12d93905cda2ce757db85ec9aaf4e5f8 335 Gene3D G3DSA:3.40.190.90 109 276 3.9E-124 T 14-10-2018 DA442_11710 4b4bbb9eece386f5cbd54eca07e08cc4 151 Gene3D G3DSA:3.90.1170.40 1 149 3.4E-54 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 DA442_11710 4b4bbb9eece386f5cbd54eca07e08cc4 151 SUPERFAMILY SSF54690 4 149 1.18E-55 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 DA442_11710 4b4bbb9eece386f5cbd54eca07e08cc4 151 Pfam PF02391 MoaE protein 8 119 5.1E-37 T 14-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 DA442_09230 79403cb5a7315048365a3434c9649f9e 423 Gene3D G3DSA:3.40.640.10 58 317 2.2E-159 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_09230 79403cb5a7315048365a3434c9649f9e 423 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 9 418 5.1E-175 T 14-10-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 DA442_09230 79403cb5a7315048365a3434c9649f9e 423 Pfam PF00202 Aminotransferase class-III 23 419 2.1E-128 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DA442_09230 79403cb5a7315048365a3434c9649f9e 423 SUPERFAMILY SSF53383 18 419 3.74E-131 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_09230 79403cb5a7315048365a3434c9649f9e 423 PIRSF PIRSF000521 2 129 1.1E-5 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DA442_09230 79403cb5a7315048365a3434c9649f9e 423 PIRSF PIRSF000521 122 422 4.0E-41 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DA442_09230 79403cb5a7315048365a3434c9649f9e 423 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 272 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DA442_09230 79403cb5a7315048365a3434c9649f9e 423 Gene3D G3DSA:3.90.1150.10 4 416 2.2E-159 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DA442_17270 683a3f1dc98035057dbc5c543301e53b 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 40 9.7E-4 T 14-10-2018 IPR001451 Hexapeptide repeat DA442_17270 683a3f1dc98035057dbc5c543301e53b 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 96 129 7.5E-6 T 14-10-2018 IPR001451 Hexapeptide repeat DA442_17270 683a3f1dc98035057dbc5c543301e53b 182 Gene3D G3DSA:2.160.10.10 1 182 1.4E-55 T 14-10-2018 DA442_17270 683a3f1dc98035057dbc5c543301e53b 182 SUPERFAMILY SSF51161 4 174 5.68E-44 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily DA442_08395 da6397e2363e546efc4d4fdeacdc8ef3 209 SMART SM00945 3 117 8.3E-66 T 14-10-2018 IPR016103 ProQ/FinO domain DA442_08395 da6397e2363e546efc4d4fdeacdc8ef3 209 Pfam PF04352 ProQ/FINO family 6 113 1.1E-43 T 14-10-2018 IPR016103 ProQ/FinO domain DA442_08395 da6397e2363e546efc4d4fdeacdc8ef3 209 Pfam PF17516 ProQ C-terminal domain 160 208 1.1E-22 T 14-10-2018 IPR035236 RNA chaperone ProQ, C-terminal DA442_08395 da6397e2363e546efc4d4fdeacdc8ef3 209 Gene3D G3DSA:1.10.1710.10 1 117 7.3E-26 T 14-10-2018 IPR036442 ProQ/FinO domain superfamily DA442_08395 da6397e2363e546efc4d4fdeacdc8ef3 209 SUPERFAMILY SSF48657 4 117 9.55E-41 T 14-10-2018 IPR036442 ProQ/FinO domain superfamily DA442_08395 da6397e2363e546efc4d4fdeacdc8ef3 209 Hamap MF_00749 RNA chaperone ProQ [proQ]. 1 209 30.424 T 14-10-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 DA442_03515 72796aa1705f7b489a17453603e03990 168 PIRSF PIRSF006162 6 167 4.4E-55 T 14-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 DA442_03515 72796aa1705f7b489a17453603e03990 168 SUPERFAMILY SSF101307 9 161 7.19E-50 T 14-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 DA442_03515 72796aa1705f7b489a17453603e03990 168 Pfam PF04608 Phosphatidylglycerophosphatase A 15 159 7.7E-54 T 14-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 DA442_16635 fcb7946e9a852872d6257ab5add748b6 307 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 82 233 4.7E-12 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 DA442_16635 fcb7946e9a852872d6257ab5add748b6 307 PIRSF PIRSF000545 1 307 1.7E-145 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 DA442_16635 fcb7946e9a852872d6257ab5add748b6 307 Hamap MF_00215 Pantothenate kinase [coaA]. 1 307 179.72 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 DA442_16635 fcb7946e9a852872d6257ab5add748b6 307 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 3 307 3.4E-145 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 DA442_16635 fcb7946e9a852872d6257ab5add748b6 307 SUPERFAMILY SSF52540 3 306 1.86E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_16635 fcb7946e9a852872d6257ab5add748b6 307 Gene3D G3DSA:3.40.50.300 1 307 2.9E-93 T 14-10-2018 DA442_16110 9377db12b0a1b3e6406373358133bae8 273 SMART SM00971 9 113 6.0E-59 T 14-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 DA442_16110 9377db12b0a1b3e6406373358133bae8 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 112 4.4E-37 T 14-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 DA442_16110 9377db12b0a1b3e6406373358133bae8 273 Gene3D G3DSA:1.10.3130.10 1 142 3.6E-52 T 14-10-2018 DA442_16110 9377db12b0a1b3e6406373358133bae8 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DA442_16110 9377db12b0a1b3e6406373358133bae8 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 3.6E-9 T 14-10-2018 IPR001451 Hexapeptide repeat DA442_16110 9377db12b0a1b3e6406373358133bae8 273 SUPERFAMILY SSF51161 8 258 3.97E-63 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily DA442_16110 9377db12b0a1b3e6406373358133bae8 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 82 242 2.5E-74 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 DA442_16110 9377db12b0a1b3e6406373358133bae8 273 Gene3D G3DSA:2.160.10.10 143 273 4.7E-37 T 14-10-2018 DA442_16110 9377db12b0a1b3e6406373358133bae8 273 PIRSF PIRSF000441 7 72 89.0 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 DA442_16110 9377db12b0a1b3e6406373358133bae8 273 PIRSF PIRSF000441 75 266 1.5E-55 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 DA442_25645 b121f8e6ee4ac262a6cd6628a4a790f2 341 SUPERFAMILY SSF51004 44 321 2.75E-29 T 14-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily DA442_25645 b121f8e6ee4ac262a6cd6628a4a790f2 341 Gene3D G3DSA:2.130.10.10 1 338 2.4E-88 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 DA442_25645 b121f8e6ee4ac262a6cd6628a4a790f2 341 Pfam PF10282 Lactonase, 7-bladed beta-propeller 9 337 1.2E-92 T 14-10-2018 IPR019405 Lactonase, 7-bladed beta propeller DA442_14810 3a846422e96727413e6a62ceb80c1de5 306 Pfam PF04960 Glutaminase 22 306 3.7E-113 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 DA442_14810 3a846422e96727413e6a62ceb80c1de5 306 Hamap MF_00313 Glutaminase [glsA]. 4 306 47.208 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 DA442_14810 3a846422e96727413e6a62ceb80c1de5 306 TIGRFAM TIGR03814 Gln_ase: glutaminase A 8 306 1.6E-130 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 DA442_14810 3a846422e96727413e6a62ceb80c1de5 306 SUPERFAMILY SSF56601 4 306 4.07E-114 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DA442_14810 3a846422e96727413e6a62ceb80c1de5 306 Gene3D G3DSA:3.40.710.10 1 306 1.1E-109 T 14-10-2018 DA442_16935 b424700014a989888011ed9cc83ae8ce 204 SMART SM01144 1 192 1.0E-53 T 14-10-2018 IPR005636 DTW DA442_16935 b424700014a989888011ed9cc83ae8ce 204 Pfam PF03942 DTW domain 5 183 1.1E-42 T 14-10-2018 IPR005636 DTW DA442_12045 22519aafa5bea0bd81fde397c22af33a 82 Pfam PF03692 Putative zinc- or iron-chelating domain 3 59 2.5E-6 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein DA442_11310 bc668b2885bcf1bb57974c1141cb6a1f 350 Gene3D G3DSA:1.10.760.10 208 325 2.0E-36 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_11310 bc668b2885bcf1bb57974c1141cb6a1f 350 SUPERFAMILY SSF46626 54 164 1.06E-26 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_11310 bc668b2885bcf1bb57974c1141cb6a1f 350 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 221 301 5.4E-9 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_11310 bc668b2885bcf1bb57974c1141cb6a1f 350 SUPERFAMILY SSF46626 208 312 2.62E-19 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_11310 bc668b2885bcf1bb57974c1141cb6a1f 350 Gene3D G3DSA:1.10.760.10 37 161 3.4E-36 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_20540 6c56a3589827a5f75bc09aca6634a6b6 471 Gene3D G3DSA:3.40.640.10 141 360 1.5E-96 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_20540 6c56a3589827a5f75bc09aca6634a6b6 471 SUPERFAMILY SSF46785 3 68 2.04E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_20540 6c56a3589827a5f75bc09aca6634a6b6 471 SUPERFAMILY SSF53383 94 465 3.63E-93 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_20540 6c56a3589827a5f75bc09aca6634a6b6 471 Gene3D G3DSA:3.90.1150.10 98 465 1.5E-96 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DA442_20540 6c56a3589827a5f75bc09aca6634a6b6 471 Pfam PF00155 Aminotransferase class I and II 147 446 1.8E-35 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DA442_20540 6c56a3589827a5f75bc09aca6634a6b6 471 Gene3D G3DSA:1.10.10.10 1 67 2.8E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_20540 6c56a3589827a5f75bc09aca6634a6b6 471 SMART SM00345 7 66 4.5E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_20540 6c56a3589827a5f75bc09aca6634a6b6 471 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 7.0E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DA442_07845 b556e4af872392f59fbabca72eb6a76c 562 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 69 556 2.1E-169 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 DA442_07845 b556e4af872392f59fbabca72eb6a76c 562 ProSitePatterns PS01303 BCCT family of transporters signature. 372 381 - T 14-10-2018 IPR018093 BCCT transporter, conserved site DA442_07845 b556e4af872392f59fbabca72eb6a76c 562 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 110 557 3.3E-134 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 DA442_06180 be75f30228f3dbf3a00286c0753683e8 82 Pfam PF06945 Protein of unknown function (DUF1289) 11 56 1.6E-17 T 14-10-2018 IPR010710 Protein of unknown function DUF1289 DA442_00995 1df86af73acb41cceb67cce44459cfad 316 PIRSF PIRSF026649 6 312 7.8E-79 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 DA442_00995 1df86af73acb41cceb67cce44459cfad 316 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 9 303 3.2E-72 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 DA442_00995 1df86af73acb41cceb67cce44459cfad 316 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 9 310 2.2E-134 T 14-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 DA442_00995 1df86af73acb41cceb67cce44459cfad 316 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 8 313 43.947 T 14-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 DA442_11175 ea6f7e8e6278d29f03e8afb9837d027d 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 3.4E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_11175 ea6f7e8e6278d29f03e8afb9837d027d 286 SUPERFAMILY SSF53850 89 286 2.71E-31 T 14-10-2018 DA442_11175 ea6f7e8e6278d29f03e8afb9837d027d 286 Gene3D G3DSA:3.40.190.290 94 284 5.4E-39 T 14-10-2018 DA442_11175 ea6f7e8e6278d29f03e8afb9837d027d 286 SUPERFAMILY SSF46785 4 89 1.6E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_11175 ea6f7e8e6278d29f03e8afb9837d027d 286 Gene3D G3DSA:1.10.10.10 3 93 6.9E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_11175 ea6f7e8e6278d29f03e8afb9837d027d 286 Pfam PF03466 LysR substrate binding domain 89 285 3.3E-28 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_16105 941e51821aeb7ceccfcb15fc5236f59b 345 PIRSF PIRSF000114 10 344 2.0E-95 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DA442_16105 941e51821aeb7ceccfcb15fc5236f59b 345 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 192 329 1.4E-52 T 14-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DA442_16105 941e51821aeb7ceccfcb15fc5236f59b 345 Gene3D G3DSA:1.10.1040.10 201 345 6.0E-54 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DA442_16105 941e51821aeb7ceccfcb15fc5236f59b 345 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 14 334 37.107 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DA442_16105 941e51821aeb7ceccfcb15fc5236f59b 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 68 95 1.3E-42 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DA442_16105 941e51821aeb7ceccfcb15fc5236f59b 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 144 164 1.3E-42 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DA442_16105 941e51821aeb7ceccfcb15fc5236f59b 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 18 35 1.3E-42 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DA442_16105 941e51821aeb7ceccfcb15fc5236f59b 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 250 267 1.3E-42 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DA442_16105 941e51821aeb7ceccfcb15fc5236f59b 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 185 209 1.3E-42 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DA442_16105 941e51821aeb7ceccfcb15fc5236f59b 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 210 234 1.3E-42 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DA442_16105 941e51821aeb7ceccfcb15fc5236f59b 345 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 200 221 - T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DA442_16105 941e51821aeb7ceccfcb15fc5236f59b 345 SUPERFAMILY SSF48179 191 343 1.7E-56 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DA442_16105 941e51821aeb7ceccfcb15fc5236f59b 345 SUPERFAMILY SSF51735 16 190 3.38E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_16105 941e51821aeb7ceccfcb15fc5236f59b 345 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 16 170 2.9E-45 T 14-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DA442_16105 941e51821aeb7ceccfcb15fc5236f59b 345 Gene3D G3DSA:3.40.50.720 2 199 5.4E-51 T 14-10-2018 DA442_14075 6808ad32e82b61a98ae950ecf05d22ff 343 Pfam PF08402 TOBE domain 276 341 8.9E-8 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 DA442_14075 6808ad32e82b61a98ae950ecf05d22ff 343 Pfam PF00005 ABC transporter 20 164 9.0E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_14075 6808ad32e82b61a98ae950ecf05d22ff 343 SUPERFAMILY SSF52540 5 243 2.08E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_14075 6808ad32e82b61a98ae950ecf05d22ff 343 SMART SM00382 29 214 3.8E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_14075 6808ad32e82b61a98ae950ecf05d22ff 343 Gene3D G3DSA:3.40.50.300 1 240 9.6E-77 T 14-10-2018 DA442_14075 6808ad32e82b61a98ae950ecf05d22ff 343 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_14075 6808ad32e82b61a98ae950ecf05d22ff 343 SUPERFAMILY SSF50331 265 342 3.74E-9 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DA442_05065 293250ff04ab311c8867d4d88b82195b 130 Pfam PF07233 Protein of unknown function (DUF1425) 35 125 1.9E-29 T 14-10-2018 IPR010824 Protein of unknown function DUF1425 DA442_05065 293250ff04ab311c8867d4d88b82195b 130 Gene3D G3DSA:2.60.40.3230 18 129 6.7E-28 T 14-10-2018 IPR038483 YcfL-like superfamily DA442_06840 2c03102835b24b75fa06db7f4c586194 324 Gene3D G3DSA:3.40.50.720 119 302 1.2E-77 T 14-10-2018 DA442_06840 2c03102835b24b75fa06db7f4c586194 324 SUPERFAMILY SSF51735 1 315 1.13E-81 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_06840 2c03102835b24b75fa06db7f4c586194 324 Gene3D G3DSA:3.30.1780.10 5 315 1.2E-77 T 14-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 DA442_06840 2c03102835b24b75fa06db7f4c586194 324 PIRSF PIRSF001439 1 322 5.0E-64 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 DA442_06840 2c03102835b24b75fa06db7f4c586194 324 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 4 314 9.5E-54 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 DA442_12685 20b3b78ea5dcf787a301aeff183a25b8 251 SUPERFAMILY SSF53335 73 212 8.03E-20 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_12685 20b3b78ea5dcf787a301aeff183a25b8 251 Pfam PF08241 Methyltransferase domain 61 125 6.9E-9 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 DA442_12685 20b3b78ea5dcf787a301aeff183a25b8 251 Gene3D G3DSA:3.40.50.150 55 183 5.1E-14 T 14-10-2018 DA442_04725 e9068d930eafb0bc4d116cba9b2ad277 220 SUPERFAMILY SSF51735 6 136 2.37E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_04725 e9068d930eafb0bc4d116cba9b2ad277 220 Gene3D G3DSA:3.30.70.1450 141 217 3.3E-15 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DA442_04725 e9068d930eafb0bc4d116cba9b2ad277 220 Gene3D G3DSA:3.40.50.720 2 140 1.2E-34 T 14-10-2018 DA442_04725 e9068d930eafb0bc4d116cba9b2ad277 220 Pfam PF02254 TrkA-N domain 8 123 6.0E-28 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 DA442_04725 e9068d930eafb0bc4d116cba9b2ad277 220 Pfam PF02080 TrkA-C domain 154 214 1.2E-9 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DA442_04725 e9068d930eafb0bc4d116cba9b2ad277 220 SUPERFAMILY SSF116726 134 215 3.01E-16 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DA442_06000 66b0d84e4f2a23df0429cbf3ce5e3c90 331 SMART SM00382 32 237 2.5E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_06000 66b0d84e4f2a23df0429cbf3ce5e3c90 331 SUPERFAMILY SSF52540 4 268 2.41E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_06000 66b0d84e4f2a23df0429cbf3ce5e3c90 331 Gene3D G3DSA:3.40.50.300 2 331 7.6E-74 T 14-10-2018 DA442_06000 66b0d84e4f2a23df0429cbf3ce5e3c90 331 Pfam PF00005 ABC transporter 24 187 8.0E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_06000 66b0d84e4f2a23df0429cbf3ce5e3c90 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 1.8E-16 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DA442_06000 66b0d84e4f2a23df0429cbf3ce5e3c90 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 3.9E-21 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DA442_17295 94da4ad35ade9c1eefd252b76100c77e 161 Pfam PF00731 AIR carboxylase 2 150 1.7E-64 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 DA442_17295 94da4ad35ade9c1eefd252b76100c77e 161 SMART SM01001 1 152 4.4E-103 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 DA442_17295 94da4ad35ade9c1eefd252b76100c77e 161 SUPERFAMILY SSF52255 2 158 1.96E-66 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 DA442_17295 94da4ad35ade9c1eefd252b76100c77e 161 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 3 157 7.7E-67 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 DA442_17295 94da4ad35ade9c1eefd252b76100c77e 161 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 3 156 32.403 T 14-10-2018 IPR033747 Class I PurE DA442_17295 94da4ad35ade9c1eefd252b76100c77e 161 Gene3D G3DSA:3.40.50.7700 1 161 4.7E-73 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 DA442_17295 94da4ad35ade9c1eefd252b76100c77e 161 PIRSF PIRSF001338 1 160 2.5E-68 T 14-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 DA442_08270 487df863603d25f7619264723d3ac43e 57 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 6 45 3.3E-10 T 14-10-2018 IPR008621 Cbb3-type cytochrome oxidase component DA442_14535 de240144151c651cf6633e4cdc70431a 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 238 4.1E-100 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 DA442_14535 de240144151c651cf6633e4cdc70431a 243 Gene3D G3DSA:3.20.20.70 1 243 2.9E-109 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_14535 de240144151c651cf6633e4cdc70431a 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 7.8E-106 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 DA442_14535 de240144151c651cf6633e4cdc70431a 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 133.839 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 DA442_14535 de240144151c651cf6633e4cdc70431a 243 SUPERFAMILY SSF63892 4 241 2.75E-102 T 14-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 DA442_00355 8ef2b7d0127bbb017a631dc8c6893cf3 451 PIRSF PIRSF000350 1 445 1.2E-82 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 DA442_00355 8ef2b7d0127bbb017a631dc8c6893cf3 451 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 319 1.3E-70 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DA442_00355 8ef2b7d0127bbb017a631dc8c6893cf3 451 SUPERFAMILY SSF55424 337 451 4.3E-35 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DA442_00355 8ef2b7d0127bbb017a631dc8c6893cf3 451 Gene3D G3DSA:3.30.390.30 339 451 2.2E-47 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DA442_00355 8ef2b7d0127bbb017a631dc8c6893cf3 451 Gene3D G3DSA:3.50.50.60 5 315 1.2E-126 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_00355 8ef2b7d0127bbb017a631dc8c6893cf3 451 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 340 450 7.3E-33 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 DA442_00355 8ef2b7d0127bbb017a631dc8c6893cf3 451 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 DA442_00355 8ef2b7d0127bbb017a631dc8c6893cf3 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 7.6E-64 T 14-10-2018 DA442_00355 8ef2b7d0127bbb017a631dc8c6893cf3 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 7.6E-64 T 14-10-2018 DA442_00355 8ef2b7d0127bbb017a631dc8c6893cf3 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 7.6E-64 T 14-10-2018 DA442_00355 8ef2b7d0127bbb017a631dc8c6893cf3 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 336 357 7.6E-64 T 14-10-2018 DA442_00355 8ef2b7d0127bbb017a631dc8c6893cf3 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 425 445 7.6E-64 T 14-10-2018 DA442_00355 8ef2b7d0127bbb017a631dc8c6893cf3 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 7.6E-64 T 14-10-2018 DA442_00355 8ef2b7d0127bbb017a631dc8c6893cf3 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 7.6E-64 T 14-10-2018 DA442_00355 8ef2b7d0127bbb017a631dc8c6893cf3 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 403 418 7.6E-64 T 14-10-2018 DA442_00355 8ef2b7d0127bbb017a631dc8c6893cf3 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 7.6E-64 T 14-10-2018 DA442_00355 8ef2b7d0127bbb017a631dc8c6893cf3 451 Gene3D G3DSA:3.50.50.60 144 261 1.2E-126 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_00355 8ef2b7d0127bbb017a631dc8c6893cf3 451 SUPERFAMILY SSF51905 1 365 1.73E-58 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_00355 8ef2b7d0127bbb017a631dc8c6893cf3 451 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 4 451 2.5E-215 T 14-10-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 DA442_00355 8ef2b7d0127bbb017a631dc8c6893cf3 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 5.1E-29 T 14-10-2018 DA442_00355 8ef2b7d0127bbb017a631dc8c6893cf3 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 5.1E-29 T 14-10-2018 DA442_00355 8ef2b7d0127bbb017a631dc8c6893cf3 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 5.1E-29 T 14-10-2018 DA442_00355 8ef2b7d0127bbb017a631dc8c6893cf3 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 5.1E-29 T 14-10-2018 DA442_00355 8ef2b7d0127bbb017a631dc8c6893cf3 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 5.1E-29 T 14-10-2018 DA442_21510 bd775b858ecd367a32966409a6f8b7ed 107 Gene3D G3DSA:2.30.130.30 3 105 3.3E-44 T 14-10-2018 DA442_21510 bd775b858ecd367a32966409a6f8b7ed 107 PIRSF PIRSF029143 3 107 2.7E-47 T 14-10-2018 IPR008314 Uncharacterised conserved protein UCP029143 DA442_21510 bd775b858ecd367a32966409a6f8b7ed 107 Hamap MF_00684 UPF0267 protein YqfB [yqfB]. 4 105 29.836 T 14-10-2018 IPR008314 Uncharacterised conserved protein UCP029143 DA442_21510 bd775b858ecd367a32966409a6f8b7ed 107 SMART SM01022 8 106 1.3E-25 T 14-10-2018 IPR007374 ASCH domain DA442_21510 bd775b858ecd367a32966409a6f8b7ed 107 Pfam PF04266 ASCH domain 9 105 5.9E-15 T 14-10-2018 IPR007374 ASCH domain DA442_21510 bd775b858ecd367a32966409a6f8b7ed 107 SUPERFAMILY SSF88697 5 105 1.62E-32 T 14-10-2018 IPR015947 PUA-like superfamily DA442_05100 7cf32aa64fd76c0774b82cfc1282c2aa 269 Pfam PF10972 Peptidoglycan-binding protein, CsiV 20 268 8.0E-66 T 14-10-2018 IPR021241 Peptidoglycan-binding protein, CsiV DA442_01535 e8b2fa34d117e41896678b4dde01c2be 118 Gene3D G3DSA:4.10.910.10 72 118 1.3E-26 T 14-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01535 e8b2fa34d117e41896678b4dde01c2be 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.7E-53 T 14-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_01535 e8b2fa34d117e41896678b4dde01c2be 118 SUPERFAMILY SSF46946 2 114 4.42E-45 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 DA442_01535 e8b2fa34d117e41896678b4dde01c2be 118 PIRSF PIRSF002134 1 118 4.1E-41 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01535 e8b2fa34d117e41896678b4dde01c2be 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 3.4E-32 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01535 e8b2fa34d117e41896678b4dde01c2be 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 14-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01535 e8b2fa34d117e41896678b4dde01c2be 118 Gene3D G3DSA:1.10.8.50 1 71 5.4E-28 T 14-10-2018 DA442_01535 e8b2fa34d117e41896678b4dde01c2be 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 27.075 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_00660 ba989d02e543f541ac862a60212499fa 144 SUPERFAMILY SSF69500 2 143 2.88E-53 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily DA442_00660 ba989d02e543f541ac862a60212499fa 144 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 144 32.545 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 DA442_00660 ba989d02e543f541ac862a60212499fa 144 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 142 9.1E-51 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 DA442_00660 ba989d02e543f541ac862a60212499fa 144 Gene3D G3DSA:3.50.80.10 1 144 2.8E-53 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily DA442_00660 ba989d02e543f541ac862a60212499fa 144 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 144 3.2E-63 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 DA442_12210 a0d4975cf3a84541c4e3dd71f266ee4d 310 PIRSF PIRSF037167 2 307 1.2E-150 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 DA442_12210 a0d4975cf3a84541c4e3dd71f266ee4d 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DA442_12210 a0d4975cf3a84541c4e3dd71f266ee4d 310 Pfam PF05175 Methyltransferase small domain 134 223 2.4E-18 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 DA442_12210 a0d4975cf3a84541c4e3dd71f266ee4d 310 Gene3D G3DSA:1.10.8.10 16 102 1.2E-5 T 14-10-2018 DA442_12210 a0d4975cf3a84541c4e3dd71f266ee4d 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 54.02 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 DA442_12210 a0d4975cf3a84541c4e3dd71f266ee4d 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 6.7E-139 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 DA442_12210 a0d4975cf3a84541c4e3dd71f266ee4d 310 Gene3D G3DSA:3.40.50.150 103 282 3.9E-46 T 14-10-2018 DA442_12210 a0d4975cf3a84541c4e3dd71f266ee4d 310 SUPERFAMILY SSF53335 16 295 5.23E-50 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_12210 a0d4975cf3a84541c4e3dd71f266ee4d 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 301 1.1E-96 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 DA442_18155 ad2a67796c770553ae6ee7a9fbce8297 226 Pfam PF00027 Cyclic nucleotide-binding domain 34 122 7.7E-12 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain DA442_18155 ad2a67796c770553ae6ee7a9fbce8297 226 Gene3D G3DSA:2.60.120.10 16 144 1.1E-15 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DA442_18155 ad2a67796c770553ae6ee7a9fbce8297 226 SUPERFAMILY SSF51206 32 146 5.37E-20 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like DA442_02580 d1f002fea69ac5e15d4583a8a7cd6870 477 Pfam PF01235 Sodium:alanine symporter family 48 453 5.7E-163 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DA442_02580 d1f002fea69ac5e15d4583a8a7cd6870 477 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 87 102 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DA442_02580 d1f002fea69ac5e15d4583a8a7cd6870 477 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 442 1.4E-163 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DA442_02580 d1f002fea69ac5e15d4583a8a7cd6870 477 PRINTS PR00175 Sodium/alanine symporter signature 303 321 2.8E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DA442_02580 d1f002fea69ac5e15d4583a8a7cd6870 477 PRINTS PR00175 Sodium/alanine symporter signature 178 196 2.8E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DA442_02580 d1f002fea69ac5e15d4583a8a7cd6870 477 PRINTS PR00175 Sodium/alanine symporter signature 411 431 2.8E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DA442_02580 d1f002fea69ac5e15d4583a8a7cd6870 477 PRINTS PR00175 Sodium/alanine symporter signature 350 372 2.8E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DA442_02580 d1f002fea69ac5e15d4583a8a7cd6870 477 PRINTS PR00175 Sodium/alanine symporter signature 206 225 2.8E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DA442_02580 d1f002fea69ac5e15d4583a8a7cd6870 477 PRINTS PR00175 Sodium/alanine symporter signature 87 109 2.8E-57 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DA442_17655 fd90f04fc427ac658b38662de956cfb5 181 Pfam PF07152 YaeQ protein 1 171 5.2E-65 T 14-10-2018 IPR009822 YaeQ DA442_17655 fd90f04fc427ac658b38662de956cfb5 181 PIRSF PIRSF011484 1 179 1.1E-62 T 14-10-2018 IPR009822 YaeQ DA442_17655 fd90f04fc427ac658b38662de956cfb5 181 SUPERFAMILY SSF52980 2 177 9.92E-63 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DA442_17655 fd90f04fc427ac658b38662de956cfb5 181 Gene3D G3DSA:3.10.640.10 1 179 9.7E-65 T 14-10-2018 IPR038590 YaeQ superfamily DA442_17655 fd90f04fc427ac658b38662de956cfb5 181 SMART SM01322 1 174 8.5E-96 T 14-10-2018 IPR009822 YaeQ DA442_19225 04a09a5905f762d8c05d16f9e44f3a5b 279 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 11 96 1.2E-10 T 14-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain DA442_19225 04a09a5905f762d8c05d16f9e44f3a5b 279 Gene3D G3DSA:2.60.120.330 1 279 1.5E-97 T 14-10-2018 IPR027443 Isopenicillin N synthase-like DA442_19225 04a09a5905f762d8c05d16f9e44f3a5b 279 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 152 253 1.6E-15 T 14-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 DA442_19225 04a09a5905f762d8c05d16f9e44f3a5b 279 SUPERFAMILY SSF51197 7 276 1.85E-62 T 14-10-2018 DA442_14655 12d7aa07ffca5109659072b01e62f9a3 218 SUPERFAMILY SSF75445 127 198 7.19E-24 T 14-10-2018 DA442_14655 12d7aa07ffca5109659072b01e62f9a3 218 SUPERFAMILY SSF100950 1 146 4.65E-47 T 14-10-2018 IPR037171 NagB/RpiA transferase-like DA442_14655 12d7aa07ffca5109659072b01e62f9a3 218 Gene3D G3DSA:3.30.70.260 125 196 8.9E-79 T 14-10-2018 DA442_14655 12d7aa07ffca5109659072b01e62f9a3 218 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 33.695 T 14-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 DA442_14655 12d7aa07ffca5109659072b01e62f9a3 218 Gene3D G3DSA:3.40.50.1360 7 207 8.9E-79 T 14-10-2018 DA442_14655 12d7aa07ffca5109659072b01e62f9a3 218 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 214 3.2E-69 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 DA442_14655 12d7aa07ffca5109659072b01e62f9a3 218 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 1.2E-58 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 DA442_01530 756d9a7dbdd6c76983597e7873ac5986 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01530 756d9a7dbdd6c76983597e7873ac5986 37 Pfam PF00444 Ribosomal protein L36 1 37 9.4E-19 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01530 756d9a7dbdd6c76983597e7873ac5986 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.137 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01530 756d9a7dbdd6c76983597e7873ac5986 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 4.0E-23 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01530 756d9a7dbdd6c76983597e7873ac5986 37 SUPERFAMILY SSF57840 1 37 1.02E-16 T 14-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01530 756d9a7dbdd6c76983597e7873ac5986 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 3.0E-9 T 14-10-2018 DA442_15010 dd5bb5d2a43ab9b3276fab862d249096 422 Pfam PF10011 Predicted membrane protein (DUF2254) 15 369 2.0E-97 T 14-10-2018 IPR018723 Protein of unknown function DUF2254, membrane DA442_18890 078e41f505b8d236b88cc81622dceac1 431 Gene3D G3DSA:3.40.640.10 47 298 2.7E-186 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_18890 078e41f505b8d236b88cc81622dceac1 431 Pfam PF00464 Serine hydroxymethyltransferase 19 395 5.6E-175 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 DA442_18890 078e41f505b8d236b88cc81622dceac1 431 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 17 431 53.306 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 DA442_18890 078e41f505b8d236b88cc81622dceac1 431 PIRSF PIRSF000412 4 431 1.2E-167 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 DA442_18890 078e41f505b8d236b88cc81622dceac1 431 SUPERFAMILY SSF53383 9 430 3.52E-181 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_18890 078e41f505b8d236b88cc81622dceac1 431 Gene3D G3DSA:3.90.1150.10 21 404 2.7E-186 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DA442_18890 078e41f505b8d236b88cc81622dceac1 431 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 232 248 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 DA442_08380 bc630ebe496cd0214037d9259cf3a680 868 Pfam PF01433 Peptidase family M1 domain 207 435 2.5E-57 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 DA442_08380 bc630ebe496cd0214037d9259cf3a680 868 SUPERFAMILY SSF63737 2 192 8.5E-46 T 14-10-2018 DA442_08380 bc630ebe496cd0214037d9259cf3a680 868 Gene3D G3DSA:2.60.40.1840 443 544 5.2E-36 T 14-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily DA442_08380 bc630ebe496cd0214037d9259cf3a680 868 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 547 866 4.8E-114 T 14-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal DA442_08380 bc630ebe496cd0214037d9259cf3a680 868 Gene3D G3DSA:2.60.40.1730 15 193 3.2E-70 T 14-10-2018 DA442_08380 bc630ebe496cd0214037d9259cf3a680 868 SUPERFAMILY SSF55486 202 449 1.74E-74 T 14-10-2018 DA442_08380 bc630ebe496cd0214037d9259cf3a680 868 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 443 544 9.5E-34 T 14-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold DA442_08380 bc630ebe496cd0214037d9259cf3a680 868 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 866 0.0 T 14-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 DA442_08380 bc630ebe496cd0214037d9259cf3a680 868 Gene3D G3DSA:1.25.50.10 545 867 3.2E-115 T 14-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily DA442_08380 bc630ebe496cd0214037d9259cf3a680 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 312 324 4.3E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 DA442_08380 bc630ebe496cd0214037d9259cf3a680 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 175 190 4.3E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 DA442_08380 bc630ebe496cd0214037d9259cf3a680 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 293 308 4.3E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 DA442_08380 bc630ebe496cd0214037d9259cf3a680 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 257 267 4.3E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 DA442_08380 bc630ebe496cd0214037d9259cf3a680 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 125 140 4.3E-9 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 DA442_08380 bc630ebe496cd0214037d9259cf3a680 868 Gene3D G3DSA:1.10.390.10 279 442 6.0E-65 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily DA442_08380 bc630ebe496cd0214037d9259cf3a680 868 Gene3D G3DSA:1.10.1740.60 194 278 3.3E-40 T 14-10-2018 DA442_02755 8266d4ad14e3f22f20e50f64a6698c85 242 Pfam PF00072 Response regulator receiver domain 5 112 9.5E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_02755 8266d4ad14e3f22f20e50f64a6698c85 242 Gene3D G3DSA:2.40.50.1020 149 241 2.3E-9 T 14-10-2018 DA442_02755 8266d4ad14e3f22f20e50f64a6698c85 242 SMART SM00448 2 112 7.7E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_02755 8266d4ad14e3f22f20e50f64a6698c85 242 SMART SM00850 145 239 3.3E-24 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 DA442_02755 8266d4ad14e3f22f20e50f64a6698c85 242 Gene3D G3DSA:3.40.50.2300 1 129 6.0E-29 T 14-10-2018 DA442_02755 8266d4ad14e3f22f20e50f64a6698c85 242 Pfam PF04397 LytTr DNA-binding domain 146 238 2.4E-21 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 DA442_02755 8266d4ad14e3f22f20e50f64a6698c85 242 SUPERFAMILY SSF52172 1 123 3.56E-28 T 14-10-2018 IPR011006 CheY-like superfamily DA442_08335 f96ec9f534d97b661e6d6b21c40b8fe4 598 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 579 598 0.0011 T 14-10-2018 IPR020008 GlyGly-CTERM domain DA442_08335 f96ec9f534d97b661e6d6b21c40b8fe4 598 Pfam PF11949 Protein of unknown function (DUF3466) 5 210 4.1E-7 T 14-10-2018 IPR022562 Protein of unknown function DUF3466 DA442_08335 f96ec9f534d97b661e6d6b21c40b8fe4 598 Pfam PF11949 Protein of unknown function (DUF3466) 312 598 9.6E-50 T 14-10-2018 IPR022562 Protein of unknown function DUF3466 DA442_05400 5fb8726f7adff71d43bbe6e825fa5210 445 Gene3D G3DSA:1.10.10.10 29 123 4.2E-45 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_05400 5fb8726f7adff71d43bbe6e825fa5210 445 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 6 445 54.446 T 14-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 DA442_05400 5fb8726f7adff71d43bbe6e825fa5210 445 Pfam PF17192 MukF middle domain 126 286 3.7E-78 T 14-10-2018 IPR033440 Chromosome partition protein MukF, middle domain DA442_05400 5fb8726f7adff71d43bbe6e825fa5210 445 SUPERFAMILY SSF140570 124 286 2.35E-76 T 14-10-2018 IPR036141 MukF, middle domain superfamily DA442_05400 5fb8726f7adff71d43bbe6e825fa5210 445 Gene3D G3DSA:1.20.58.590 124 316 2.6E-80 T 14-10-2018 IPR036141 MukF, middle domain superfamily DA442_05400 5fb8726f7adff71d43bbe6e825fa5210 445 Pfam PF03882 MukF winged-helix domain 10 122 3.0E-53 T 14-10-2018 IPR033439 Chromosome partition protein MukF, winged-helix domain DA442_05400 5fb8726f7adff71d43bbe6e825fa5210 445 SUPERFAMILY SSF46785 13 123 2.24E-44 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_05400 5fb8726f7adff71d43bbe6e825fa5210 445 PIRSF PIRSF018282 1 445 9.9E-248 T 14-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 DA442_05400 5fb8726f7adff71d43bbe6e825fa5210 445 Pfam PF17193 MukF C-terminal domain 288 445 1.1E-77 T 14-10-2018 IPR033441 Chromosome partition protein MukF, C-terminal domain DA442_05400 5fb8726f7adff71d43bbe6e825fa5210 445 Gene3D G3DSA:1.10.225.40 358 445 1.4E-37 T 14-10-2018 IPR038198 MukF, C-terminal domain superfamily DA442_19570 f544a78a12c54c46527a77bbc083914f 351 Gene3D G3DSA:2.40.50.100 72 212 4.5E-58 T 14-10-2018 DA442_19570 f544a78a12c54c46527a77bbc083914f 351 Gene3D G3DSA:2.40.420.20 291 344 4.5E-58 T 14-10-2018 DA442_19570 f544a78a12c54c46527a77bbc083914f 351 SUPERFAMILY SSF111369 61 289 6.54E-28 T 14-10-2018 DA442_19570 f544a78a12c54c46527a77bbc083914f 351 Gene3D G3DSA:1.10.287.470 106 177 4.5E-58 T 14-10-2018 DA442_19570 f544a78a12c54c46527a77bbc083914f 351 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 70 275 8.4E-21 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DA442_19570 f544a78a12c54c46527a77bbc083914f 351 Gene3D G3DSA:2.40.30.170 60 290 4.5E-58 T 14-10-2018 DA442_19570 f544a78a12c54c46527a77bbc083914f 351 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 60 347 4.6E-59 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DA442_04190 7efbc76cfe412725899959eff3acc2e2 322 Gene3D G3DSA:3.40.50.1100 43 145 2.7E-125 T 14-10-2018 DA442_04190 7efbc76cfe412725899959eff3acc2e2 322 Gene3D G3DSA:3.40.50.1100 12 306 2.7E-125 T 14-10-2018 DA442_04190 7efbc76cfe412725899959eff3acc2e2 322 SUPERFAMILY SSF53686 3 313 1.31E-95 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DA442_04190 7efbc76cfe412725899959eff3acc2e2 322 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 311 6.8E-142 T 14-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 DA442_04190 7efbc76cfe412725899959eff3acc2e2 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 DA442_04190 7efbc76cfe412725899959eff3acc2e2 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 299 3.9E-67 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DA442_04190 7efbc76cfe412725899959eff3acc2e2 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 311 1.2E-134 T 14-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 DA442_17860 e29d64f87e5ecdf43496f54b7f90149a 244 Gene3D G3DSA:1.10.10.10 9 79 1.5E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_17860 e29d64f87e5ecdf43496f54b7f90149a 244 Pfam PF01614 Bacterial transcriptional regulator 130 238 9.9E-15 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal DA442_17860 e29d64f87e5ecdf43496f54b7f90149a 244 Pfam PF08279 HTH domain 16 56 4.6E-5 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 DA442_17860 e29d64f87e5ecdf43496f54b7f90149a 244 Gene3D G3DSA:3.30.450.40 80 240 8.1E-60 T 14-10-2018 IPR029016 GAF-like domain superfamily DA442_17860 e29d64f87e5ecdf43496f54b7f90149a 244 SUPERFAMILY SSF55781 87 240 1.9E-32 T 14-10-2018 DA442_17860 e29d64f87e5ecdf43496f54b7f90149a 244 SUPERFAMILY SSF46785 11 77 1.87E-8 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_24610 ea3261bb1116599d2994c1e464b933d2 599 SUPERFAMILY SSF51735 399 490 4.86E-8 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_24610 ea3261bb1116599d2994c1e464b933d2 599 Pfam PF00999 Sodium/hydrogen exchanger family 16 386 1.0E-32 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 DA442_24610 ea3261bb1116599d2994c1e464b933d2 599 Gene3D G3DSA:1.20.1530.20 6 388 8.5E-14 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily DA442_24610 ea3261bb1116599d2994c1e464b933d2 599 Gene3D G3DSA:3.40.50.720 397 508 1.4E-9 T 14-10-2018 DA442_24610 ea3261bb1116599d2994c1e464b933d2 599 Pfam PF02254 TrkA-N domain 399 489 1.8E-7 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 DA442_08710 49adb419fb83030fe244b7296ec56837 123 Gene3D G3DSA:3.30.1460.10 1 123 9.8E-47 T 14-10-2018 DA442_08710 49adb419fb83030fe244b7296ec56837 123 TIGRFAM TIGR02503 type_III_SycN: type III secretion chaperone SycN 4 122 7.8E-47 T 14-10-2018 IPR012673 Type III secretion system chaperone SycN GO:0009306 DA442_08710 49adb419fb83030fe244b7296ec56837 123 SUPERFAMILY SSF69635 2 121 2.08E-45 T 14-10-2018 DA442_08710 49adb419fb83030fe244b7296ec56837 123 Pfam PF05932 Tir chaperone protein (CesT) family 9 117 5.4E-7 T 14-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 DA442_14110 bbc5f8aaffb1b68d19596effbfe8d7a1 771 Pfam PF01734 Patatin-like phospholipase 45 235 3.7E-28 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 DA442_14110 bbc5f8aaffb1b68d19596effbfe8d7a1 771 Gene3D G3DSA:3.10.20.310 351 425 5.3E-7 T 14-10-2018 DA442_14110 bbc5f8aaffb1b68d19596effbfe8d7a1 771 Pfam PF07244 Surface antigen variable number repeat 355 425 3.4E-5 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 DA442_14110 bbc5f8aaffb1b68d19596effbfe8d7a1 771 Gene3D G3DSA:3.40.1090.10 27 133 8.5E-29 T 14-10-2018 DA442_14110 bbc5f8aaffb1b68d19596effbfe8d7a1 771 Gene3D G3DSA:3.40.1090.10 149 290 5.3E-17 T 14-10-2018 DA442_14110 bbc5f8aaffb1b68d19596effbfe8d7a1 771 SUPERFAMILY SSF52151 39 324 3.14E-57 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DA442_07850 100a4b9fb538c86201594ea69091c4b2 129 Gene3D G3DSA:3.40.50.300 3 129 4.9E-28 T 14-10-2018 DA442_07850 100a4b9fb538c86201594ea69091c4b2 129 Pfam PF13671 AAA domain 6 106 1.6E-13 T 14-10-2018 DA442_07850 100a4b9fb538c86201594ea69091c4b2 129 SUPERFAMILY SSF52540 5 105 3.04E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_11670 64be6db47fe9076ee755075a49371721 424 Pfam PF02308 MgtC family 16 141 6.1E-19 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 DA442_11670 64be6db47fe9076ee755075a49371721 424 Pfam PF13194 Domain of unknown function (DUF4010) 189 397 7.5E-65 T 14-10-2018 IPR025105 Domain of unknown function DUF4010 DA442_04830 5841b30773594542c0f2df453da93658 440 Pfam PF13286 Phosphohydrolase-associated domain 343 433 2.0E-25 T 14-10-2018 IPR026875 Phosphohydrolase-associated domain DA442_04830 5841b30773594542c0f2df453da93658 440 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 24 436 1.2E-128 T 14-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 DA442_04830 5841b30773594542c0f2df453da93658 440 SMART SM00471 58 264 4.0E-8 T 14-10-2018 IPR003607 HD/PDEase domain DA442_04830 5841b30773594542c0f2df453da93658 440 SUPERFAMILY SSF109604 19 437 2.76E-79 T 14-10-2018 DA442_04830 5841b30773594542c0f2df453da93658 440 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 5 435 34.879 T 14-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 DA442_04830 5841b30773594542c0f2df453da93658 440 Pfam PF01966 HD domain 62 147 1.2E-7 T 14-10-2018 IPR006674 HD domain DA442_24075 e327742a7406b0921835e4f2940364a4 253 Pfam PF00753 Metallo-beta-lactamase superfamily 10 209 2.2E-18 T 14-10-2018 IPR001279 Metallo-beta-lactamase DA442_24075 e327742a7406b0921835e4f2940364a4 253 SUPERFAMILY SSF56281 8 243 1.57E-37 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DA442_24075 e327742a7406b0921835e4f2940364a4 253 Gene3D G3DSA:3.60.15.10 2 236 5.7E-33 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DA442_24075 e327742a7406b0921835e4f2940364a4 253 SMART SM00849 10 209 1.7E-17 T 14-10-2018 IPR001279 Metallo-beta-lactamase DA442_20750 aed10bcc456047eefa1f96635f985953 763 Gene3D G3DSA:3.30.450.20 26 181 9.1E-9 T 14-10-2018 DA442_20750 aed10bcc456047eefa1f96635f985953 763 Gene3D G3DSA:3.30.70.270 330 504 1.0E-51 T 14-10-2018 DA442_20750 aed10bcc456047eefa1f96635f985953 763 Pfam PF02743 Cache domain 35 249 7.1E-14 T 14-10-2018 IPR033479 Double Cache domain 1 DA442_20750 aed10bcc456047eefa1f96635f985953 763 Pfam PF00563 EAL domain 508 742 1.3E-70 T 14-10-2018 IPR001633 EAL domain DA442_20750 aed10bcc456047eefa1f96635f985953 763 SUPERFAMILY SSF141868 507 754 1.7E-83 T 14-10-2018 IPR035919 EAL domain superfamily DA442_20750 aed10bcc456047eefa1f96635f985953 763 SMART SM00052 502 747 1.0E-105 T 14-10-2018 IPR001633 EAL domain DA442_20750 aed10bcc456047eefa1f96635f985953 763 Pfam PF00990 Diguanylate cyclase, GGDEF domain 336 486 1.7E-41 T 14-10-2018 IPR000160 GGDEF domain DA442_20750 aed10bcc456047eefa1f96635f985953 763 Gene3D G3DSA:3.20.20.450 505 760 8.2E-89 T 14-10-2018 IPR035919 EAL domain superfamily DA442_20750 aed10bcc456047eefa1f96635f985953 763 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 334 487 5.0E-33 T 14-10-2018 IPR000160 GGDEF domain DA442_20750 aed10bcc456047eefa1f96635f985953 763 SMART SM00267 325 492 1.2E-48 T 14-10-2018 IPR000160 GGDEF domain DA442_20750 aed10bcc456047eefa1f96635f985953 763 SUPERFAMILY SSF55073 341 492 6.98E-42 T 14-10-2018 IPR029787 Nucleotide cyclase DA442_12745 69a09577fda3e6707d98935ae56c2fd3 150 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 146 2.5E-59 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DA442_12745 69a09577fda3e6707d98935ae56c2fd3 150 Pfam PF07977 FabA-like domain 17 141 1.1E-39 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DA442_12745 69a09577fda3e6707d98935ae56c2fd3 150 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 36.564 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DA442_12745 69a09577fda3e6707d98935ae56c2fd3 150 SUPERFAMILY SSF54637 7 146 1.34E-48 T 14-10-2018 IPR029069 HotDog domain superfamily DA442_12745 69a09577fda3e6707d98935ae56c2fd3 150 Gene3D G3DSA:3.10.129.10 2 150 4.0E-61 T 14-10-2018 DA442_04430 84bdf563922c8bab6954ca067d761b3c 588 PIRSF PIRSF000171 1 580 2.2E-49 T 14-10-2018 DA442_04430 84bdf563922c8bab6954ca067d761b3c 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 14-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DA442_04430 84bdf563922c8bab6954ca067d761b3c 588 Gene3D G3DSA:1.20.58.100 431 547 6.3E-38 T 14-10-2018 DA442_04430 84bdf563922c8bab6954ca067d761b3c 588 SUPERFAMILY SSF51905 5 428 1.67E-71 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_04430 84bdf563922c8bab6954ca067d761b3c 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 2.4E-36 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DA442_04430 84bdf563922c8bab6954ca067d761b3c 588 SUPERFAMILY SSF46977 452 588 2.75E-46 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DA442_04430 84bdf563922c8bab6954ca067d761b3c 588 Gene3D G3DSA:3.50.50.60 9 416 7.1E-170 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_04430 84bdf563922c8bab6954ca067d761b3c 588 SUPERFAMILY SSF56425 236 356 2.69E-42 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DA442_04430 84bdf563922c8bab6954ca067d761b3c 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 4.6E-240 T 14-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DA442_04430 84bdf563922c8bab6954ca067d761b3c 588 Gene3D G3DSA:3.90.700.10 246 350 7.1E-170 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DA442_04430 84bdf563922c8bab6954ca067d761b3c 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 2.4E-274 T 14-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 DA442_04430 84bdf563922c8bab6954ca067d761b3c 588 Pfam PF00890 FAD binding domain 9 405 3.4E-118 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 DA442_04430 84bdf563922c8bab6954ca067d761b3c 588 Gene3D G3DSA:4.10.80.40 548 588 1.2E-23 T 14-10-2018 DA442_18960 db0853ee159893e2c587273221b8f2f7 179 Pfam PF13275 S4 domain 25 86 1.0E-21 T 14-10-2018 DA442_18960 db0853ee159893e2c587273221b8f2f7 179 SUPERFAMILY SSF55174 13 87 4.32E-17 T 14-10-2018 DA442_18960 db0853ee159893e2c587273221b8f2f7 179 Gene3D G3DSA:3.10.290.10 17 88 6.3E-21 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DA442_20290 aad4b1bf4af4f2fe9c0e6a5af221dd02 787 SMART SM00052 516 759 2.7E-65 T 14-10-2018 IPR001633 EAL domain DA442_20290 aad4b1bf4af4f2fe9c0e6a5af221dd02 787 SUPERFAMILY SSF141868 521 766 1.96E-67 T 14-10-2018 IPR035919 EAL domain superfamily DA442_20290 aad4b1bf4af4f2fe9c0e6a5af221dd02 787 Gene3D G3DSA:3.30.70.270 334 517 5.6E-46 T 14-10-2018 DA442_20290 aad4b1bf4af4f2fe9c0e6a5af221dd02 787 Pfam PF00990 Diguanylate cyclase, GGDEF domain 340 502 2.1E-35 T 14-10-2018 IPR000160 GGDEF domain DA442_20290 aad4b1bf4af4f2fe9c0e6a5af221dd02 787 SMART SM00267 329 506 2.2E-42 T 14-10-2018 IPR000160 GGDEF domain DA442_20290 aad4b1bf4af4f2fe9c0e6a5af221dd02 787 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 338 505 5.8E-31 T 14-10-2018 IPR000160 GGDEF domain DA442_20290 aad4b1bf4af4f2fe9c0e6a5af221dd02 787 SUPERFAMILY SSF55073 345 507 2.82E-37 T 14-10-2018 IPR029787 Nucleotide cyclase DA442_20290 aad4b1bf4af4f2fe9c0e6a5af221dd02 787 Pfam PF00563 EAL domain 522 754 5.6E-62 T 14-10-2018 IPR001633 EAL domain DA442_20290 aad4b1bf4af4f2fe9c0e6a5af221dd02 787 Gene3D G3DSA:3.20.20.450 518 771 7.3E-73 T 14-10-2018 IPR035919 EAL domain superfamily DA442_16565 1694c1c947e59f041f23e5217af7a6f4 1400 Gene3D G3DSA:2.40.50.100 1022 1126 1.2E-29 T 14-10-2018 DA442_16565 1694c1c947e59f041f23e5217af7a6f4 1400 SUPERFAMILY SSF64484 16 1363 0.0 T 14-10-2018 DA442_16565 1694c1c947e59f041f23e5217af7a6f4 1400 Gene3D G3DSA:2.40.50.100 1151 1214 4.4E-64 T 14-10-2018 DA442_16565 1694c1c947e59f041f23e5217af7a6f4 1400 Gene3D G3DSA:1.10.1790.20 1135 1313 4.4E-64 T 14-10-2018 DA442_16565 1694c1c947e59f041f23e5217af7a6f4 1400 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1376 18.988 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DA442_16565 1694c1c947e59f041f23e5217af7a6f4 1400 Gene3D G3DSA:2.40.50.100 948 1021 1.5E-24 T 14-10-2018 DA442_16565 1694c1c947e59f041f23e5217af7a6f4 1400 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 2.1E-27 T 14-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DA442_16565 1694c1c947e59f041f23e5217af7a6f4 1400 Gene3D G3DSA:1.10.150.390 1315 1376 1.0E-28 T 14-10-2018 DA442_16565 1694c1c947e59f041f23e5217af7a6f4 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 395 4.5E-8 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DA442_16565 1694c1c947e59f041f23e5217af7a6f4 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 485 1.9E-27 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DA442_16565 1694c1c947e59f041f23e5217af7a6f4 1400 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1366 0.0 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DA442_16565 1694c1c947e59f041f23e5217af7a6f4 1400 Gene3D G3DSA:1.10.274.100 490 640 4.2E-40 T 14-10-2018 DA442_16565 1694c1c947e59f041f23e5217af7a6f4 1400 Gene3D G3DSA:1.10.132.30 641 790 3.4E-66 T 14-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DA442_16565 1694c1c947e59f041f23e5217af7a6f4 1400 Gene3D G3DSA:1.10.40.90 374 416 3.1E-22 T 14-10-2018 DA442_16565 1694c1c947e59f041f23e5217af7a6f4 1400 SMART SM00663 235 514 1.1E-184 T 14-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DA442_16565 1694c1c947e59f041f23e5217af7a6f4 1400 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 3.7E-87 T 14-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DA442_16565 1694c1c947e59f041f23e5217af7a6f4 1400 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1314 1.4E-77 T 14-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DA442_16565 1694c1c947e59f041f23e5217af7a6f4 1400 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 5.2E-19 T 14-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DA442_01205 119161329aa0ffdfb20f58138a5f480d 323 Pfam PF02706 Chain length determinant protein 23 125 8.7E-20 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 DA442_23135 4dc64e636d123e481566407adf5b3f4f 283 Gene3D G3DSA:3.40.50.10490 97 278 8.8E-39 T 14-10-2018 DA442_23135 4dc64e636d123e481566407adf5b3f4f 283 Pfam PF01380 SIS domain 129 257 2.6E-17 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DA442_23135 4dc64e636d123e481566407adf5b3f4f 283 Pfam PF01418 Helix-turn-helix domain, rpiR family 3 74 4.5E-19 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 DA442_23135 4dc64e636d123e481566407adf5b3f4f 283 Gene3D G3DSA:1.10.10.10 1 76 1.8E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_23135 4dc64e636d123e481566407adf5b3f4f 283 SUPERFAMILY SSF46689 2 77 5.55E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_23135 4dc64e636d123e481566407adf5b3f4f 283 SUPERFAMILY SSF53697 104 277 1.31E-37 T 14-10-2018 DA442_08445 9c8dbea4f86ec0ac3352f6a3f793dd05 350 SUPERFAMILY SSF51569 8 347 1.93E-130 T 14-10-2018 DA442_08445 9c8dbea4f86ec0ac3352f6a3f793dd05 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 348 2.7E-158 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 DA442_08445 9c8dbea4f86ec0ac3352f6a3f793dd05 350 Gene3D G3DSA:3.20.20.70 1 350 4.0E-151 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_08445 9c8dbea4f86ec0ac3352f6a3f793dd05 350 PIRSF PIRSF001361 1 350 2.2E-153 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 DA442_08445 9c8dbea4f86ec0ac3352f6a3f793dd05 350 Pfam PF00793 DAHP synthetase I family 44 338 1.4E-98 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 DA442_19315 6a64303e2cfafdef8a270e59c05d1226 202 Pfam PF05036 Sporulation related domain 112 184 4.2E-13 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 DA442_19315 6a64303e2cfafdef8a270e59c05d1226 202 SUPERFAMILY SSF110997 112 173 1.44E-7 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 DA442_19315 6a64303e2cfafdef8a270e59c05d1226 202 Gene3D G3DSA:3.30.70.1070 102 193 3.7E-21 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 DA442_18575 c3accc2cdd0a445faad84f0f3a6f630f 329 Gene3D G3DSA:3.40.190.10 122 316 1.0E-6 T 14-10-2018 DA442_18575 c3accc2cdd0a445faad84f0f3a6f630f 329 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 41 97 2.1E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_18575 c3accc2cdd0a445faad84f0f3a6f630f 329 Gene3D G3DSA:1.10.10.10 31 119 1.2E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_18575 c3accc2cdd0a445faad84f0f3a6f630f 329 SUPERFAMILY SSF46785 38 115 8.25E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_18575 c3accc2cdd0a445faad84f0f3a6f630f 329 SUPERFAMILY SSF53850 131 323 1.12E-10 T 14-10-2018 DA442_18575 c3accc2cdd0a445faad84f0f3a6f630f 329 Gene3D G3DSA:3.40.190.10 203 300 1.0E-6 T 14-10-2018 DA442_18290 41b0eac5ce7745bb28518f671f51a0a2 508 Gene3D G3DSA:3.40.720.10 34 400 4.2E-99 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DA442_18290 41b0eac5ce7745bb28518f671f51a0a2 508 Gene3D G3DSA:3.30.1120.10 401 460 4.2E-99 T 14-10-2018 DA442_18290 41b0eac5ce7745bb28518f671f51a0a2 508 Pfam PF00884 Sulfatase 34 359 9.0E-65 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 DA442_18290 41b0eac5ce7745bb28518f671f51a0a2 508 Pfam PF14707 C-terminal region of aryl-sulfatase 399 498 1.5E-7 T 14-10-2018 DA442_18290 41b0eac5ce7745bb28518f671f51a0a2 508 SUPERFAMILY SSF53649 30 498 2.04E-127 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DA442_21960 27bd59f1134dede1af66ab63ba80551b 802 Gene3D G3DSA:2.60.40.3110 241 330 3.4E-9 T 14-10-2018 DA442_21960 27bd59f1134dede1af66ab63ba80551b 802 Pfam PF00577 Outer membrane usher protein 217 694 2.2E-32 T 14-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 DA442_21960 27bd59f1134dede1af66ab63ba80551b 802 Gene3D G3DSA:2.60.40.2610 621 710 1.3E-7 T 14-10-2018 DA442_04285 106b9eec2e617296f36e7497092aa727 181 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 2 168 2.0E-28 T 14-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 DA442_04285 106b9eec2e617296f36e7497092aa727 181 SUPERFAMILY SSF56300 2 164 5.24E-38 T 14-10-2018 DA442_04285 106b9eec2e617296f36e7497092aa727 181 Gene3D G3DSA:3.60.21.10 1 181 5.2E-62 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like DA442_04285 106b9eec2e617296f36e7497092aa727 181 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 2 162 4.6E-23 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 DA442_06270 0c8d8d35fbc7dac9a8715e7b5c0ad0e7 194 Gene3D G3DSA:1.10.3820.10 7 186 4.5E-34 T 14-10-2018 IPR038266 NapC/NirT cytochrome c superfamily DA442_06270 0c8d8d35fbc7dac9a8715e7b5c0ad0e7 194 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 8 181 3.3E-56 T 14-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal DA442_06270 0c8d8d35fbc7dac9a8715e7b5c0ad0e7 194 SUPERFAMILY SSF48695 21 181 1.29E-30 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily DA442_06270 0c8d8d35fbc7dac9a8715e7b5c0ad0e7 194 PIRSF PIRSF000013 1 193 3.6E-79 T 14-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 DA442_20125 c7d8c278291f1c1d9da833e61347a935 266 SMART SM00382 22 204 2.0E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_20125 c7d8c278291f1c1d9da833e61347a935 266 SUPERFAMILY SSF52540 12 215 1.65E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_20125 c7d8c278291f1c1d9da833e61347a935 266 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 13 242 2.5E-106 T 14-10-2018 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 DA442_20125 c7d8c278291f1c1d9da833e61347a935 266 Gene3D G3DSA:3.40.50.300 1 265 3.6E-62 T 14-10-2018 DA442_20125 c7d8c278291f1c1d9da833e61347a935 266 Pfam PF00005 ABC transporter 13 154 1.6E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_20125 c7d8c278291f1c1d9da833e61347a935 266 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_01475 c9b332bb286f20030c1364bc18190d37 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 2.0E-54 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 DA442_01475 c9b332bb286f20030c1364bc18190d37 123 SMART SM01374 1 123 3.3E-85 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 DA442_01475 c9b332bb286f20030c1364bc18190d37 123 Gene3D G3DSA:2.40.150.20 1 123 3.6E-56 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 DA442_01475 c9b332bb286f20030c1364bc18190d37 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 27.304 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 DA442_01475 c9b332bb286f20030c1364bc18190d37 123 SUPERFAMILY SSF50193 2 122 9.03E-51 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 DA442_01475 c9b332bb286f20030c1364bc18190d37 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 2.8E-58 T 14-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 DA442_01475 c9b332bb286f20030c1364bc18190d37 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 14-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_16845 491c42c8ce65c657fed9e36f5daf27c0 206 Pfam PF07947 YhhN family 26 204 3.0E-32 T 14-10-2018 IPR012506 YhhN-like GO:0016021 DA442_12650 a4d740ce4d71ba68fa1451539d637edf 591 Gene3D G3DSA:3.30.750.24 439 558 1.0E-20 T 14-10-2018 IPR036513 STAS domain superfamily DA442_12650 a4d740ce4d71ba68fa1451539d637edf 591 Pfam PF01740 STAS domain 451 543 2.6E-16 T 14-10-2018 IPR002645 STAS domain DA442_12650 a4d740ce4d71ba68fa1451539d637edf 591 Pfam PF00916 Sulfate permease family 28 391 2.0E-81 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 DA442_12650 a4d740ce4d71ba68fa1451539d637edf 591 SUPERFAMILY SSF52091 450 540 2.55E-13 T 14-10-2018 IPR036513 STAS domain superfamily DA442_18365 f545a2394ba356379a0bda28eff5e97a 440 Gene3D G3DSA:3.20.20.70 15 411 7.6E-114 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_18365 f545a2394ba356379a0bda28eff5e97a 440 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 18 409 1.6E-149 T 14-10-2018 DA442_18365 f545a2394ba356379a0bda28eff5e97a 440 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 252 326 3.0E-6 T 14-10-2018 DA442_18365 f545a2394ba356379a0bda28eff5e97a 440 SUPERFAMILY SSF102114 24 372 1.05E-37 T 14-10-2018 DA442_18365 f545a2394ba356379a0bda28eff5e97a 440 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 302 391 7.0E-19 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain DA442_18365 f545a2394ba356379a0bda28eff5e97a 440 Pfam PF04055 Radical SAM superfamily 24 196 1.6E-13 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DA442_18365 f545a2394ba356379a0bda28eff5e97a 440 Pfam PF13186 Iron-sulfur cluster-binding domain 303 363 1.5E-8 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain DA442_07605 7f12febd70db752f1ebdb918efb6008b 436 Pfam PF06812 ImpA, N-terminal, type VI secretion system 14 124 4.1E-24 T 14-10-2018 IPR010657 ImpA, N-terminal DA442_20535 544f4d5e0b4dcbcb5e473f499edd80e6 182 SMART SM01266 4 52 4.3E-7 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 DA442_20535 544f4d5e0b4dcbcb5e473f499edd80e6 182 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 127 162 2.3E-11 T 14-10-2018 IPR001451 Hexapeptide repeat DA442_20535 544f4d5e0b4dcbcb5e473f499edd80e6 182 SUPERFAMILY SSF51161 3 180 3.19E-50 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily DA442_20535 544f4d5e0b4dcbcb5e473f499edd80e6 182 Pfam PF12464 Maltose acetyltransferase 6 50 3.3E-8 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 DA442_20535 544f4d5e0b4dcbcb5e473f499edd80e6 182 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 136 164 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DA442_20535 544f4d5e0b4dcbcb5e473f499edd80e6 182 Gene3D G3DSA:2.160.10.10 1 182 3.1E-64 T 14-10-2018 DA442_25010 0be14bf4881b3f864c535aad68d83c6b 802 SUPERFAMILY SSF49303 732 800 1.01E-7 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily DA442_25010 0be14bf4881b3f864c535aad68d83c6b 802 SUPERFAMILY SSF49785 3 187 4.68E-48 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily DA442_25010 0be14bf4881b3f864c535aad68d83c6b 802 Gene3D G3DSA:3.20.20.80 283 629 5.7E-121 T 14-10-2018 DA442_25010 0be14bf4881b3f864c535aad68d83c6b 802 Gene3D G3DSA:2.60.40.10 189 282 5.3E-11 T 14-10-2018 IPR013783 Immunoglobulin-like fold DA442_25010 0be14bf4881b3f864c535aad68d83c6b 802 SUPERFAMILY SSF49303 191 285 9.5E-16 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily DA442_25010 0be14bf4881b3f864c535aad68d83c6b 802 SUPERFAMILY SSF49303 637 710 1.15E-5 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily DA442_25010 0be14bf4881b3f864c535aad68d83c6b 802 Gene3D G3DSA:2.60.120.260 3 188 1.8E-48 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily DA442_25010 0be14bf4881b3f864c535aad68d83c6b 802 SUPERFAMILY SSF51445 283 631 8.44E-102 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DA442_25010 0be14bf4881b3f864c535aad68d83c6b 802 Pfam PF00703 Glycosyl hydrolases family 2 202 286 2.0E-5 T 14-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 DA442_24900 9b9382c8c81d65ca6350d4e62f7b9ef1 145 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 28 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DA442_24900 9b9382c8c81d65ca6350d4e62f7b9ef1 145 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 2.1E-13 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DA442_24900 9b9382c8c81d65ca6350d4e62f7b9ef1 145 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 2.1E-13 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DA442_24900 9b9382c8c81d65ca6350d4e62f7b9ef1 145 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 2.1E-13 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DA442_24900 9b9382c8c81d65ca6350d4e62f7b9ef1 145 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 2 140 1.0E-66 T 14-10-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 DA442_24900 9b9382c8c81d65ca6350d4e62f7b9ef1 145 Gene3D G3DSA:1.10.1660.10 1 126 3.7E-33 T 14-10-2018 DA442_24900 9b9382c8c81d65ca6350d4e62f7b9ef1 145 Pfam PF09278 MerR, DNA binding 45 109 2.2E-17 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding DA442_24900 9b9382c8c81d65ca6350d4e62f7b9ef1 145 Pfam PF00376 MerR family regulatory protein 4 40 2.9E-13 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DA442_24900 9b9382c8c81d65ca6350d4e62f7b9ef1 145 SUPERFAMILY SSF46955 4 124 4.03E-28 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DA442_24900 9b9382c8c81d65ca6350d4e62f7b9ef1 145 SMART SM00422 3 71 8.4E-25 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DA442_25420 2d27c4b45f9af8fe0f1d12f2e7bd2b23 729 SMART SM00490 279 363 5.5E-9 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_25420 2d27c4b45f9af8fe0f1d12f2e7bd2b23 729 Pfam PF00271 Helicase conserved C-terminal domain 259 363 9.2E-13 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_25420 2d27c4b45f9af8fe0f1d12f2e7bd2b23 729 Gene3D G3DSA:3.40.50.300 2 211 1.7E-40 T 14-10-2018 DA442_25420 2d27c4b45f9af8fe0f1d12f2e7bd2b23 729 Gene3D G3DSA:3.40.50.300 238 401 4.0E-20 T 14-10-2018 DA442_25420 2d27c4b45f9af8fe0f1d12f2e7bd2b23 729 SMART SM00487 20 231 7.1E-31 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DA442_25420 2d27c4b45f9af8fe0f1d12f2e7bd2b23 729 Pfam PF00270 DEAD/DEAH box helicase 26 197 9.0E-28 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DA442_25420 2d27c4b45f9af8fe0f1d12f2e7bd2b23 729 SUPERFAMILY SSF52540 34 372 3.95E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_01505 373e78b454ba8d0fb118e3d8020ad1d1 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 25.541 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_01505 373e78b454ba8d0fb118e3d8020ad1d1 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 8.5E-44 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_01505 373e78b454ba8d0fb118e3d8020ad1d1 117 Gene3D G3DSA:3.30.420.100 1 117 7.8E-44 T 14-10-2018 DA442_01505 373e78b454ba8d0fb118e3d8020ad1d1 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 8.8E-43 T 14-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01505 373e78b454ba8d0fb118e3d8020ad1d1 117 SUPERFAMILY SSF53137 3 115 6.54E-51 T 14-10-2018 DA442_03285 3924744742e534ca25c9e59c1a7383c0 510 Pfam PF00583 Acetyltransferase (GNAT) family 47 138 3.9E-7 T 14-10-2018 IPR000182 GNAT domain DA442_03285 3924744742e534ca25c9e59c1a7383c0 510 SUPERFAMILY SSF55729 5 140 6.35E-17 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_03285 3924744742e534ca25c9e59c1a7383c0 510 Gene3D G3DSA:3.40.630.30 4 221 4.8E-49 T 14-10-2018 DA442_03285 3924744742e534ca25c9e59c1a7383c0 510 Pfam PF00795 Carbon-nitrogen hydrolase 225 484 8.0E-35 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 DA442_03285 3924744742e534ca25c9e59c1a7383c0 510 SUPERFAMILY SSF56317 222 491 2.88E-60 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DA442_03285 3924744742e534ca25c9e59c1a7383c0 510 Gene3D G3DSA:3.60.110.10 222 506 4.9E-61 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DA442_20165 95f88377d44e9360a0319bbb0aa2bbdc 301 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 131 164 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DA442_20165 95f88377d44e9360a0319bbb0aa2bbdc 301 Gene3D G3DSA:3.30.950.10 167 295 5.0E-33 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 DA442_20165 95f88377d44e9360a0319bbb0aa2bbdc 301 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 51 285 8.0E-83 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DA442_20165 95f88377d44e9360a0319bbb0aa2bbdc 301 SUPERFAMILY SSF53790 49 288 1.7E-65 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 DA442_20165 95f88377d44e9360a0319bbb0aa2bbdc 301 Gene3D G3DSA:3.40.1010.10 49 166 1.6E-41 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 DA442_20165 95f88377d44e9360a0319bbb0aa2bbdc 301 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 53 261 1.4E-40 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 DA442_03425 879cb37360e3114497f77a11a2e9e895 98 Pfam PF12286 Protein of unknown function (DUF3622) 1 71 2.6E-35 T 14-10-2018 IPR022069 Protein of unknown function DUF3622 DA442_07595 df8843b78323718ac4b5bbf007d7aabe 150 Pfam PF13404 AsnC-type helix-turn-helix domain 10 51 3.3E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DA442_07595 df8843b78323718ac4b5bbf007d7aabe 150 SUPERFAMILY SSF54909 75 149 6.44E-12 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel DA442_07595 df8843b78323718ac4b5bbf007d7aabe 150 SMART SM00344 10 116 2.7E-25 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DA442_07595 df8843b78323718ac4b5bbf007d7aabe 150 SUPERFAMILY SSF46785 10 66 1.06E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_07595 df8843b78323718ac4b5bbf007d7aabe 150 Gene3D G3DSA:1.10.10.10 3 63 6.3E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_07595 df8843b78323718ac4b5bbf007d7aabe 150 Gene3D G3DSA:3.30.70.920 64 149 5.1E-15 T 14-10-2018 DA442_07595 df8843b78323718ac4b5bbf007d7aabe 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 37 56 2.7E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DA442_07595 df8843b78323718ac4b5bbf007d7aabe 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 10 26 2.7E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DA442_07595 df8843b78323718ac4b5bbf007d7aabe 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 26 37 2.7E-15 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DA442_07595 df8843b78323718ac4b5bbf007d7aabe 150 ProSitePatterns PS00519 AsnC-type HTH domain signature. 28 54 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DA442_07595 df8843b78323718ac4b5bbf007d7aabe 150 Pfam PF01037 Lrp/AsnC ligand binding domain 77 145 2.3E-12 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DA442_18805 4ed6496e56f8785d5d0a07ac35ad45e0 148 Pfam PF11158 Protein of unknown function (DUF2938) 1 139 1.4E-52 T 14-10-2018 IPR021329 Protein of unknown function DUF2938 DA442_22465 3243b9712f46ac717bb0452aa1fe1962 124 PIRSF PIRSF031804 1 124 1.0E-41 T 14-10-2018 IPR016983 Uncharacterised conserved protein UCP031804 DA442_22465 3243b9712f46ac717bb0452aa1fe1962 124 Pfam PF06803 Protein of unknown function (DUF1232) 63 98 7.2E-14 T 14-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 DA442_17615 cd50dabc3bb6f48e6de8f83299440939 118 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 6 113 1.1E-28 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 DA442_17615 cd50dabc3bb6f48e6de8f83299440939 118 Pfam PF00825 Ribonuclease P 6 112 2.1E-32 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 DA442_17615 cd50dabc3bb6f48e6de8f83299440939 118 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 56 70 - T 14-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 DA442_17615 cd50dabc3bb6f48e6de8f83299440939 118 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 16 104 3.0E-46 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 DA442_17615 cd50dabc3bb6f48e6de8f83299440939 118 Gene3D G3DSA:3.30.230.10 1 118 4.8E-41 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DA442_17615 cd50dabc3bb6f48e6de8f83299440939 118 SUPERFAMILY SSF54211 4 114 1.82E-30 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DA442_17615 cd50dabc3bb6f48e6de8f83299440939 118 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 17.434 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 DA442_24565 53279d15eeae841bc24282ea5e1b6ce5 243 Pfam PF00460 Flagella basal body rod protein 7 35 1.3E-5 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 DA442_24565 53279d15eeae841bc24282ea5e1b6ce5 243 SUPERFAMILY SSF117143 78 176 1.57E-11 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like DA442_24565 53279d15eeae841bc24282ea5e1b6ce5 243 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 120 5.7E-30 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G DA442_24565 53279d15eeae841bc24282ea5e1b6ce5 243 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 167 239 4.3E-16 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DA442_16735 b5caa2d21ac759436554b7e43b0b9f47 121 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 1 111 6.0E-59 T 14-10-2018 IPR009867 Protein of unknown function DUF1422 DA442_16735 b5caa2d21ac759436554b7e43b0b9f47 121 Pfam PF07226 Protein of unknown function (DUF1422) 5 115 9.6E-51 T 14-10-2018 IPR009867 Protein of unknown function DUF1422 DA442_21330 a895e8419ad15abf96bc25c185ace08b 430 Gene3D G3DSA:2.40.10.10 56 343 1.6E-42 T 14-10-2018 DA442_21330 a895e8419ad15abf96bc25c185ace08b 430 SMART SM00020 27 331 8.9E-20 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 DA442_21330 a895e8419ad15abf96bc25c185ace08b 430 SUPERFAMILY SSF50494 26 336 1.17E-41 T 14-10-2018 IPR009003 Peptidase S1, PA clan DA442_21330 a895e8419ad15abf96bc25c185ace08b 430 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 150 164 1.2E-12 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 DA442_21330 a895e8419ad15abf96bc25c185ace08b 430 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 277 289 1.2E-12 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 DA442_21330 a895e8419ad15abf96bc25c185ace08b 430 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 57 72 1.2E-12 T 14-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 DA442_21330 a895e8419ad15abf96bc25c185ace08b 430 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 67 72 - T 14-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 DA442_21330 a895e8419ad15abf96bc25c185ace08b 430 Pfam PF00089 Trypsin 40 331 3.3E-26 T 14-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 DA442_17725 5891b30367739cdd3ef2f1fc8f69ebf4 362 Pfam PF07995 Glucose / Sorbosone dehydrogenase 34 357 3.8E-110 T 14-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase DA442_17725 5891b30367739cdd3ef2f1fc8f69ebf4 362 SUPERFAMILY SSF50952 25 354 2.62E-39 T 14-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 DA442_17725 5891b30367739cdd3ef2f1fc8f69ebf4 362 Gene3D G3DSA:2.120.10.30 19 362 8.3E-100 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like DA442_01775 f8e2fa0ab0d904fabfdeaf7445fc8729 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.3E-44 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01775 f8e2fa0ab0d904fabfdeaf7445fc8729 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 14-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_01775 f8e2fa0ab0d904fabfdeaf7445fc8729 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.361 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01775 f8e2fa0ab0d904fabfdeaf7445fc8729 103 SUPERFAMILY SSF141091 1 102 2.35E-38 T 14-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01775 f8e2fa0ab0d904fabfdeaf7445fc8729 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 7.0E-40 T 14-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_10155 095e9a7403e101bf97596125a71edfd7 30 Pfam PF11665 Protein of unknown function (DUF3265) 5 30 6.8E-11 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_11980 12bfe66bfb68ff2ac92aaafae8f46ff6 294 SUPERFAMILY SSF74650 9 288 8.16E-75 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 DA442_11980 12bfe66bfb68ff2ac92aaafae8f46ff6 294 Pfam PF01263 Aldose 1-epimerase 27 291 1.7E-51 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 DA442_11980 12bfe66bfb68ff2ac92aaafae8f46ff6 294 Gene3D G3DSA:2.70.98.10 2 293 4.5E-86 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 DA442_11980 12bfe66bfb68ff2ac92aaafae8f46ff6 294 PIRSF PIRSF016020 3 294 7.0E-66 T 14-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 DA442_15820 23d820358c46f749ec2e05521dd85b26 639 Gene3D G3DSA:3.40.50.300 276 540 2.4E-55 T 14-10-2018 DA442_15820 23d820358c46f749ec2e05521dd85b26 639 Pfam PF12848 ABC transporter 217 295 2.1E-27 T 14-10-2018 IPR032781 ABC-transporter extension domain DA442_15820 23d820358c46f749ec2e05521dd85b26 639 Gene3D G3DSA:3.40.50.300 7 273 1.6E-58 T 14-10-2018 DA442_15820 23d820358c46f749ec2e05521dd85b26 639 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_15820 23d820358c46f749ec2e05521dd85b26 639 Pfam PF00005 ABC transporter 17 178 5.9E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_15820 23d820358c46f749ec2e05521dd85b26 639 SMART SM00382 26 223 1.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_15820 23d820358c46f749ec2e05521dd85b26 639 SMART SM00382 337 503 1.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_15820 23d820358c46f749ec2e05521dd85b26 639 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_15820 23d820358c46f749ec2e05521dd85b26 639 Pfam PF00005 ABC transporter 328 459 3.3E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_15820 23d820358c46f749ec2e05521dd85b26 639 SUPERFAMILY SSF52540 2 258 1.39E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_15820 23d820358c46f749ec2e05521dd85b26 639 SUPERFAMILY SSF52540 277 494 6.34E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_01435 b31e1053967a7de8f847d99ce8f56d74 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 14-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01435 b31e1053967a7de8f847d99ce8f56d74 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.535 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 DA442_01435 b31e1053967a7de8f847d99ce8f56d74 100 Pfam PF00276 Ribosomal protein L23 9 95 1.7E-31 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 DA442_01435 b31e1053967a7de8f847d99ce8f56d74 100 Gene3D G3DSA:3.30.70.330 1 100 5.0E-38 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily DA442_01435 b31e1053967a7de8f847d99ce8f56d74 100 SUPERFAMILY SSF54189 6 97 2.88E-32 T 14-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_18030 651bd12f346e34b9d479fbfaa88dac69 288 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 3 276 4.1E-83 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 DA442_18030 651bd12f346e34b9d479fbfaa88dac69 288 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 1 284 16.865 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 DA442_18030 651bd12f346e34b9d479fbfaa88dac69 288 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 57 79 - T 14-10-2018 IPR030470 UbiA prenyltransferase conserved site DA442_18030 651bd12f346e34b9d479fbfaa88dac69 288 Pfam PF01040 UbiA prenyltransferase family 18 269 6.4E-56 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 DA442_18030 651bd12f346e34b9d479fbfaa88dac69 288 Gene3D G3DSA:1.10.357.140 13 182 1.9E-17 T 14-10-2018 DA442_01295 b33e21008fb29449cfa4ac980ab33497 396 Gene3D G3DSA:2.60.120.10 7 282 7.9E-125 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DA442_01295 b33e21008fb29449cfa4ac980ab33497 396 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 3 389 3.1E-87 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DA442_01295 b33e21008fb29449cfa4ac980ab33497 396 PIRSF PIRSF001480 1 396 2.0E-95 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DA442_01295 b33e21008fb29449cfa4ac980ab33497 396 PRINTS PR00714 Phosphomannose isomerase type I signature 281 300 4.5E-65 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DA442_01295 b33e21008fb29449cfa4ac980ab33497 396 PRINTS PR00714 Phosphomannose isomerase type I signature 81 102 4.5E-65 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DA442_01295 b33e21008fb29449cfa4ac980ab33497 396 PRINTS PR00714 Phosphomannose isomerase type I signature 227 242 4.5E-65 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DA442_01295 b33e21008fb29449cfa4ac980ab33497 396 PRINTS PR00714 Phosphomannose isomerase type I signature 262 281 4.5E-65 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DA442_01295 b33e21008fb29449cfa4ac980ab33497 396 PRINTS PR00714 Phosphomannose isomerase type I signature 33 48 4.5E-65 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DA442_01295 b33e21008fb29449cfa4ac980ab33497 396 PRINTS PR00714 Phosphomannose isomerase type I signature 126 149 4.5E-65 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DA442_01295 b33e21008fb29449cfa4ac980ab33497 396 PRINTS PR00714 Phosphomannose isomerase type I signature 243 262 4.5E-65 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DA442_01295 b33e21008fb29449cfa4ac980ab33497 396 PRINTS PR00714 Phosphomannose isomerase type I signature 5 23 4.5E-65 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DA442_01295 b33e21008fb29449cfa4ac980ab33497 396 Gene3D G3DSA:2.60.120.10 308 389 7.9E-125 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DA442_01295 b33e21008fb29449cfa4ac980ab33497 396 Gene3D G3DSA:1.10.441.10 150 307 7.9E-125 T 14-10-2018 DA442_01295 b33e21008fb29449cfa4ac980ab33497 396 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 126 134 - T 14-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DA442_01295 b33e21008fb29449cfa4ac980ab33497 396 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 262 287 - T 14-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DA442_01295 b33e21008fb29449cfa4ac980ab33497 396 SUPERFAMILY SSF51182 2 389 8.3E-90 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DA442_01295 b33e21008fb29449cfa4ac980ab33497 396 Pfam PF01238 Phosphomannose isomerase type I 3 362 6.0E-80 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DA442_22580 47f7ae6badf60aecae7f30c382e89554 62 SMART SM00966 6 49 1.9E-5 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 DA442_22580 47f7ae6badf60aecae7f30c382e89554 62 Gene3D G3DSA:2.10.260.10 2 46 5.1E-7 T 14-10-2018 DA442_22580 47f7ae6badf60aecae7f30c382e89554 62 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 6 45 2.0E-8 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 DA442_22580 47f7ae6badf60aecae7f30c382e89554 62 SUPERFAMILY SSF89447 1 48 3.14E-10 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily DA442_22580 47f7ae6badf60aecae7f30c382e89554 62 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 6 45 1.3E-8 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 DA442_23940 e6b580c0bd196e8a228d44d3e2a2b328 331 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DA442_23940 e6b580c0bd196e8a228d44d3e2a2b328 331 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 175 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 DA442_23940 e6b580c0bd196e8a228d44d3e2a2b328 331 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 195 217 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DA442_23940 e6b580c0bd196e8a228d44d3e2a2b328 331 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 327 1.4E-34 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 DA442_23940 e6b580c0bd196e8a228d44d3e2a2b328 331 Gene3D G3DSA:3.40.50.720 103 298 9.5E-133 T 14-10-2018 DA442_23940 e6b580c0bd196e8a228d44d3e2a2b328 331 Gene3D G3DSA:3.40.50.720 4 318 9.5E-133 T 14-10-2018 DA442_23940 e6b580c0bd196e8a228d44d3e2a2b328 331 SUPERFAMILY SSF51735 103 299 2.85E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_23940 e6b580c0bd196e8a228d44d3e2a2b328 331 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 298 2.8E-50 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 DA442_23940 e6b580c0bd196e8a228d44d3e2a2b328 331 SUPERFAMILY SSF52283 1 136 8.29E-42 T 14-10-2018 DA442_11095 8d1219cc7bcf0bfefea182cb03561265 98 Pfam PF03795 YCII-related domain 1 95 2.2E-29 T 14-10-2018 IPR005545 YCII-related DA442_11095 8d1219cc7bcf0bfefea182cb03561265 98 Gene3D G3DSA:3.30.70.1060 1 98 5.2E-38 T 14-10-2018 DA442_11095 8d1219cc7bcf0bfefea182cb03561265 98 SUPERFAMILY SSF54909 1 98 2.5E-32 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel DA442_12440 b411291b7ee311009155f3dd5f9057cb 351 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 20 349 4.8E-98 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DA442_12440 b411291b7ee311009155f3dd5f9057cb 351 SUPERFAMILY SSF48029 26 135 2.75E-20 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical DA442_12440 b411291b7ee311009155f3dd5f9057cb 351 Pfam PF14841 FliG middle domain 134 206 4.5E-26 T 14-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain DA442_12440 b411291b7ee311009155f3dd5f9057cb 351 PIRSF PIRSF003161 18 351 1.0E-114 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DA442_12440 b411291b7ee311009155f3dd5f9057cb 351 Gene3D G3DSA:1.10.220.30 214 351 1.7E-43 T 14-10-2018 DA442_12440 b411291b7ee311009155f3dd5f9057cb 351 Gene3D G3DSA:1.10.220.30 108 212 2.4E-29 T 14-10-2018 DA442_12440 b411291b7ee311009155f3dd5f9057cb 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 214 239 1.0E-59 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DA442_12440 b411291b7ee311009155f3dd5f9057cb 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 53 79 1.0E-59 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DA442_12440 b411291b7ee311009155f3dd5f9057cb 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 24 40 1.0E-59 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DA442_12440 b411291b7ee311009155f3dd5f9057cb 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 267 287 1.0E-59 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DA442_12440 b411291b7ee311009155f3dd5f9057cb 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 245 265 1.0E-59 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DA442_12440 b411291b7ee311009155f3dd5f9057cb 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 133 156 1.0E-59 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DA442_12440 b411291b7ee311009155f3dd5f9057cb 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 291 317 1.0E-59 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DA442_12440 b411291b7ee311009155f3dd5f9057cb 351 Gene3D G3DSA:1.10.220.30 19 103 2.3E-18 T 14-10-2018 DA442_12440 b411291b7ee311009155f3dd5f9057cb 351 SUPERFAMILY SSF48029 133 344 5.23E-67 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical DA442_12440 b411291b7ee311009155f3dd5f9057cb 351 Pfam PF01706 FliG C-terminal domain 236 343 5.2E-41 T 14-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal DA442_12440 b411291b7ee311009155f3dd5f9057cb 351 Pfam PF14842 FliG N-terminal domain 24 124 1.9E-28 T 14-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain DA442_18215 d84bcb1f29f7d761b37006f03a8c408d 6084 PRINTS PR00313 NodO calcium binding signature 5972 5981 3.5E-6 T 14-10-2018 DA442_18215 d84bcb1f29f7d761b37006f03a8c408d 6084 PRINTS PR00313 NodO calcium binding signature 5963 5971 3.5E-6 T 14-10-2018 DA442_18215 d84bcb1f29f7d761b37006f03a8c408d 6084 PRINTS PR00313 NodO calcium binding signature 5954 5962 3.5E-6 T 14-10-2018 DA442_18215 d84bcb1f29f7d761b37006f03a8c408d 6084 PRINTS PR00313 NodO calcium binding signature 5942 5953 3.5E-6 T 14-10-2018 DA442_18215 d84bcb1f29f7d761b37006f03a8c408d 6084 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1001 1079 6.4E-4 T 14-10-2018 IPR010221 VCBS repeat DA442_18215 d84bcb1f29f7d761b37006f03a8c408d 6084 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 5959 5977 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site DA442_18215 d84bcb1f29f7d761b37006f03a8c408d 6084 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 5950 5968 - T 14-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site DA442_18215 d84bcb1f29f7d761b37006f03a8c408d 6084 Gene3D G3DSA:2.150.10.10 5933 6064 2.2E-18 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DA442_18215 d84bcb1f29f7d761b37006f03a8c408d 6084 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2238 2377 3.7E-57 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain DA442_18215 d84bcb1f29f7d761b37006f03a8c408d 6084 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2381 2521 1.5E-57 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain DA442_18215 d84bcb1f29f7d761b37006f03a8c408d 6084 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 3561 3718 3.1E-49 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain DA442_18215 d84bcb1f29f7d761b37006f03a8c408d 6084 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1809 1950 1.9E-52 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain DA442_18215 d84bcb1f29f7d761b37006f03a8c408d 6084 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1381 1520 1.9E-56 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain DA442_18215 d84bcb1f29f7d761b37006f03a8c408d 6084 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2813 2961 1.4E-45 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain DA442_18215 d84bcb1f29f7d761b37006f03a8c408d 6084 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2964 3111 2.0E-45 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain DA442_18215 d84bcb1f29f7d761b37006f03a8c408d 6084 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1095 1235 4.1E-55 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain DA442_18215 d84bcb1f29f7d761b37006f03a8c408d 6084 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 506 665 2.1E-27 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain DA442_18215 d84bcb1f29f7d761b37006f03a8c408d 6084 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1667 1804 5.9E-56 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain DA442_18215 d84bcb1f29f7d761b37006f03a8c408d 6084 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 3113 3256 4.8E-42 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain DA442_18215 d84bcb1f29f7d761b37006f03a8c408d 6084 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 809 950 1.7E-53 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain DA442_18215 d84bcb1f29f7d761b37006f03a8c408d 6084 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2667 2809 6.9E-54 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain DA442_18215 d84bcb1f29f7d761b37006f03a8c408d 6084 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 667 804 1.1E-56 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain DA442_18215 d84bcb1f29f7d761b37006f03a8c408d 6084 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1238 1377 1.9E-55 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain DA442_18215 d84bcb1f29f7d761b37006f03a8c408d 6084 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 952 1093 1.9E-57 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain DA442_18215 d84bcb1f29f7d761b37006f03a8c408d 6084 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2524 2665 9.7E-57 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain DA442_18215 d84bcb1f29f7d761b37006f03a8c408d 6084 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 3412 3559 2.7E-46 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain DA442_18215 d84bcb1f29f7d761b37006f03a8c408d 6084 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 3261 3406 5.2E-46 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain DA442_18215 d84bcb1f29f7d761b37006f03a8c408d 6084 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1524 1664 2.4E-57 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain DA442_18215 d84bcb1f29f7d761b37006f03a8c408d 6084 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1952 2092 1.3E-56 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain DA442_18215 d84bcb1f29f7d761b37006f03a8c408d 6084 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2095 2234 5.7E-55 T 14-10-2018 IPR019959 T1SS-143 repeat-containing domain DA442_18215 d84bcb1f29f7d761b37006f03a8c408d 6084 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 5992 6081 8.9E-13 T 14-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass DA442_18215 d84bcb1f29f7d761b37006f03a8c408d 6084 SUPERFAMILY SSF51120 5885 6065 4.97E-18 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal DA442_03220 5186ad0e7a52040f7e44346709b2db7e 326 Gene3D G3DSA:3.40.50.1000 112 315 1.2E-41 T 14-10-2018 IPR023214 HAD superfamily DA442_03220 5186ad0e7a52040f7e44346709b2db7e 326 Pfam PF12710 haloacid dehalogenase-like hydrolase 63 264 2.0E-18 T 14-10-2018 DA442_03220 5186ad0e7a52040f7e44346709b2db7e 326 SUPERFAMILY SSF56784 61 312 4.96E-23 T 14-10-2018 IPR036412 HAD-like superfamily DA442_13240 fc8900936719dde346703010311f2522 339 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 335 1.4E-140 T 14-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 DA442_13240 fc8900936719dde346703010311f2522 339 Gene3D G3DSA:3.90.25.10 194 329 1.0E-144 T 14-10-2018 DA442_13240 fc8900936719dde346703010311f2522 339 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 322 1.6E-59 T 14-10-2018 IPR016040 NAD(P)-binding domain DA442_13240 fc8900936719dde346703010311f2522 339 SUPERFAMILY SSF51735 2 336 6.86E-98 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_13240 fc8900936719dde346703010311f2522 339 Gene3D G3DSA:3.40.50.720 3 274 1.0E-144 T 14-10-2018 DA442_13240 fc8900936719dde346703010311f2522 339 PRINTS PR01713 Nucleotide sugar epimerase signature 231 246 9.5E-6 T 14-10-2018 DA442_13240 fc8900936719dde346703010311f2522 339 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 9.5E-6 T 14-10-2018 DA442_13240 fc8900936719dde346703010311f2522 339 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 9.5E-6 T 14-10-2018 DA442_18300 943674dab3bb881cdb9701ca567be0bb 327 SUPERFAMILY SSF52540 5 302 6.81E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_18300 943674dab3bb881cdb9701ca567be0bb 327 Gene3D G3DSA:1.10.8.300 209 324 4.8E-35 T 14-10-2018 DA442_18300 943674dab3bb881cdb9701ca567be0bb 327 PIRSF PIRSF002849 1 327 3.5E-128 T 14-10-2018 DA442_18300 943674dab3bb881cdb9701ca567be0bb 327 Gene3D G3DSA:3.40.50.300 1 208 2.3E-51 T 14-10-2018 DA442_18300 943674dab3bb881cdb9701ca567be0bb 327 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 38 170 1.1E-60 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 DA442_02730 34d06cbd9da5c31cdd45f3fd417dbfe7 311 SMART SM00904 183 307 9.5E-64 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 DA442_02730 34d06cbd9da5c31cdd45f3fd417dbfe7 311 Gene3D G3DSA:3.40.50.620 1 187 4.7E-62 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DA442_02730 34d06cbd9da5c31cdd45f3fd417dbfe7 311 Gene3D G3DSA:2.40.30.30 188 311 3.5E-40 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 DA442_02730 34d06cbd9da5c31cdd45f3fd417dbfe7 311 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 307 4.9E-108 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 DA442_02730 34d06cbd9da5c31cdd45f3fd417dbfe7 311 SUPERFAMILY SSF82114 174 309 3.49E-45 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 DA442_02730 34d06cbd9da5c31cdd45f3fd417dbfe7 311 Pfam PF06574 FAD synthetase 13 167 2.1E-59 T 14-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 DA442_02730 34d06cbd9da5c31cdd45f3fd417dbfe7 311 Pfam PF01687 Riboflavin kinase 184 306 7.2E-39 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 DA442_02730 34d06cbd9da5c31cdd45f3fd417dbfe7 311 SUPERFAMILY SSF52374 16 175 2.67E-36 T 14-10-2018 DA442_02730 34d06cbd9da5c31cdd45f3fd417dbfe7 311 PIRSF PIRSF004491 1 311 3.4E-107 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 DA442_02730 34d06cbd9da5c31cdd45f3fd417dbfe7 311 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 18 56 1.8E-8 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DA442_14305 3333ccf35fe09cb61f2d5f60c84c8761 460 SMART SM00963 1 86 5.3E-37 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DA442_14305 3333ccf35fe09cb61f2d5f60c84c8761 460 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 1.4E-73 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DA442_14305 3333ccf35fe09cb61f2d5f60c84c8761 460 SMART SM00962 100 296 7.1E-115 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DA442_14305 3333ccf35fe09cb61f2d5f60c84c8761 460 SUPERFAMILY SSF47446 329 430 7.19E-38 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 DA442_14305 3333ccf35fe09cb61f2d5f60c84c8761 460 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.251 T 14-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 DA442_14305 3333ccf35fe09cb61f2d5f60c84c8761 460 Gene3D G3DSA:3.40.50.300 90 285 4.0E-123 T 14-10-2018 DA442_14305 3333ccf35fe09cb61f2d5f60c84c8761 460 SUPERFAMILY SSF52540 42 353 1.38E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_14305 3333ccf35fe09cb61f2d5f60c84c8761 460 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 4.0E-179 T 14-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 DA442_14305 3333ccf35fe09cb61f2d5f60c84c8761 460 SMART SM00382 99 247 1.4E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_14305 3333ccf35fe09cb61f2d5f60c84c8761 460 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DA442_14305 3333ccf35fe09cb61f2d5f60c84c8761 460 Gene3D G3DSA:1.20.120.140 4 305 4.0E-123 T 14-10-2018 DA442_14305 3333ccf35fe09cb61f2d5f60c84c8761 460 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.1E-22 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DA442_14305 3333ccf35fe09cb61f2d5f60c84c8761 460 Gene3D G3DSA:1.10.260.30 328 453 9.6E-45 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 DA442_14305 3333ccf35fe09cb61f2d5f60c84c8761 460 Pfam PF02978 Signal peptide binding domain 329 427 3.9E-33 T 14-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 DA442_12110 3dcf91a21754c6d27283f5ccc0b77867 291 SUPERFAMILY SSF46785 1 83 8.74E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_12110 3dcf91a21754c6d27283f5ccc0b77867 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 5.1E-13 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_12110 3dcf91a21754c6d27283f5ccc0b77867 291 Gene3D G3DSA:1.10.10.10 1 89 1.1E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_12110 3dcf91a21754c6d27283f5ccc0b77867 291 Gene3D G3DSA:3.40.190.290 90 290 4.1E-72 T 14-10-2018 DA442_12110 3dcf91a21754c6d27283f5ccc0b77867 291 SUPERFAMILY SSF53850 89 287 1.18E-37 T 14-10-2018 DA442_12110 3dcf91a21754c6d27283f5ccc0b77867 291 Pfam PF03466 LysR substrate binding domain 88 286 1.1E-39 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_14475 12267950814022bc2da8b16799076629 158 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 35.946 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DA442_14475 12267950814022bc2da8b16799076629 158 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 157 3.1E-68 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DA442_14475 12267950814022bc2da8b16799076629 158 SUPERFAMILY SSF69765 1 157 1.23E-65 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DA442_14475 12267950814022bc2da8b16799076629 158 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 14-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DA442_14475 12267950814022bc2da8b16799076629 158 Pfam PF02542 YgbB family 2 155 2.0E-65 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DA442_14475 12267950814022bc2da8b16799076629 158 Gene3D G3DSA:3.30.1330.50 1 158 1.1E-69 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DA442_11780 2f9039b184410f78be2b864bf6c17e21 348 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 348 1.2E-138 T 14-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 DA442_11780 2f9039b184410f78be2b864bf6c17e21 348 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 3 348 27.115 T 14-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 DA442_11780 2f9039b184410f78be2b864bf6c17e21 348 Pfam PF03116 NQR2, RnfD, RnfE family 6 347 2.1E-106 T 14-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 DA442_05255 ba8e79430027099d2bf1a5778a204c64 181 Pfam PF07445 Primosomal replication protein priC 4 178 8.7E-51 T 14-10-2018 IPR010890 Primosomal replication PriB/PriC DA442_05255 ba8e79430027099d2bf1a5778a204c64 181 Gene3D G3DSA:1.20.1270.340 1 98 3.8E-16 T 14-10-2018 IPR038338 PriB/PriC superfamily DA442_22715 f664d9efc5937892212a7b40b5e2f370 613 Gene3D G3DSA:1.10.510.40 363 543 1.1E-9 T 14-10-2018 DA442_22715 f664d9efc5937892212a7b40b5e2f370 613 Pfam PF06276 Ferric iron reductase FhuF-like transporter 396 556 1.9E-14 T 14-10-2018 IPR022770 Ferric iron reductase FhuF domain DA442_22715 f664d9efc5937892212a7b40b5e2f370 613 Pfam PF04183 IucA / IucC family 162 372 3.1E-33 T 14-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 DA442_21545 279e7d5ba16df5136bb6f161b28be3be 100 Gene3D G3DSA:3.40.50.2300 1 99 1.3E-37 T 14-10-2018 DA442_21545 279e7d5ba16df5136bb6f161b28be3be 100 SUPERFAMILY SSF52794 2 94 2.09E-33 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DA442_21545 279e7d5ba16df5136bb6f161b28be3be 100 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 4 86 1.9E-31 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 DA442_21545 279e7d5ba16df5136bb6f161b28be3be 100 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 94 2.9E-17 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DA442_15360 e9530ed76ca6a976f127ee9bbcaf2e41 176 PIRSF PIRSF002070 2 175 6.1E-38 T 14-10-2018 DA442_15360 e9530ed76ca6a976f127ee9bbcaf2e41 176 Pfam PF00436 Single-strand binding protein family 6 106 6.4E-44 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 DA442_15360 e9530ed76ca6a976f127ee9bbcaf2e41 176 Hamap MF_00984 Single-stranded DNA-binding protein. 6 118 39.834 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 DA442_15360 e9530ed76ca6a976f127ee9bbcaf2e41 176 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 176 1.8E-63 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 DA442_15360 e9530ed76ca6a976f127ee9bbcaf2e41 176 Gene3D G3DSA:2.40.50.140 2 144 1.8E-51 T 14-10-2018 DA442_15360 e9530ed76ca6a976f127ee9bbcaf2e41 176 SUPERFAMILY SSF50249 4 176 1.27E-64 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_02795 1cbdfadb4d49fcd20468b98f5a654160 357 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 10 346 3.2E-163 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 DA442_02795 1cbdfadb4d49fcd20468b98f5a654160 357 Pfam PF00793 DAHP synthetase I family 41 340 2.9E-105 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 DA442_02795 1cbdfadb4d49fcd20468b98f5a654160 357 SUPERFAMILY SSF51569 8 345 8.33E-139 T 14-10-2018 DA442_02795 1cbdfadb4d49fcd20468b98f5a654160 357 Gene3D G3DSA:3.20.20.70 3 348 8.8E-158 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_02795 1cbdfadb4d49fcd20468b98f5a654160 357 PIRSF PIRSF001361 1 354 1.1E-163 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 DA442_07460 2d35ffd61dc8164798ab05133dfc305f 403 SMART SM00471 161 297 2.9E-9 T 14-10-2018 IPR003607 HD/PDEase domain DA442_07460 2d35ffd61dc8164798ab05133dfc305f 403 Gene3D G3DSA:1.10.3210.10 11 328 5.2E-70 T 14-10-2018 DA442_07460 2d35ffd61dc8164798ab05133dfc305f 403 SUPERFAMILY SSF109604 156 327 2.42E-32 T 14-10-2018 DA442_07460 2d35ffd61dc8164798ab05133dfc305f 403 Pfam PF01966 HD domain 166 287 1.0E-13 T 14-10-2018 IPR006674 HD domain DA442_07460 2d35ffd61dc8164798ab05133dfc305f 403 Pfam PF11871 Domain of unknown function (DUF3391) 9 133 5.6E-18 T 14-10-2018 IPR021812 Protein of unknown function DUF3391 DA442_14740 23480d1f9f5ea288dcdfbeaadb2d5f65 231 SUPERFAMILY SSF54060 20 228 8.24E-94 T 14-10-2018 DA442_14740 23480d1f9f5ea288dcdfbeaadb2d5f65 231 Pfam PF04231 Endonuclease I 33 227 1.4E-46 T 14-10-2018 IPR007346 Endonuclease I GO:0004518 DA442_01180 fb469e3ac53e2a4f5bc2c5f84682d2bc 253 Pfam PF06251 Capsule biosynthesis GfcC 35 246 1.3E-20 T 14-10-2018 IPR010425 Domain of unknown function DUF1017 DA442_21825 01b0e9a95f8de6c0b431e3b67d10916f 494 Gene3D G3DSA:1.25.40.10 170 318 1.6E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_21825 01b0e9a95f8de6c0b431e3b67d10916f 494 Gene3D G3DSA:1.25.40.10 11 169 5.5E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_21825 01b0e9a95f8de6c0b431e3b67d10916f 494 SMART SM00028 207 240 3.1 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_21825 01b0e9a95f8de6c0b431e3b67d10916f 494 SMART SM00028 127 160 53.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_21825 01b0e9a95f8de6c0b431e3b67d10916f 494 SUPERFAMILY SSF48452 119 315 6.54E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_22690 e7980835e0da501740588d5b87a29157 345 SUPERFAMILY SSF81345 17 342 4.05E-76 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DA442_22690 e7980835e0da501740588d5b87a29157 345 Pfam PF01032 FecCD transport family 40 342 1.3E-82 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DA442_22690 e7980835e0da501740588d5b87a29157 345 Gene3D G3DSA:1.10.3470.10 18 345 3.0E-85 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DA442_18765 89c5f4616067b596c0e37d369d716281 450 SUPERFAMILY SSF158791 21 139 6.15E-11 T 14-10-2018 DA442_18765 89c5f4616067b596c0e37d369d716281 450 Gene3D G3DSA:1.10.357.20 276 449 3.8E-45 T 14-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain DA442_18765 89c5f4616067b596c0e37d369d716281 450 SMART SM00924 39 142 9.4E-5 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain DA442_18765 89c5f4616067b596c0e37d369d716281 450 Pfam PF03448 MgtE intracellular N domain 40 140 5.0E-13 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain DA442_18765 89c5f4616067b596c0e37d369d716281 450 Pfam PF01769 Divalent cation transporter 321 442 7.5E-24 T 14-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 DA442_18765 89c5f4616067b596c0e37d369d716281 450 SUPERFAMILY SSF161093 282 449 7.59E-44 T 14-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 DA442_25195 91c80e74b6d0e95ac48a9e1958e7ab4f 441 Pfam PF13641 Glycosyltransferase like family 2 64 297 3.1E-16 T 14-10-2018 DA442_25195 91c80e74b6d0e95ac48a9e1958e7ab4f 441 SUPERFAMILY SSF53448 56 346 3.38E-37 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DA442_25195 91c80e74b6d0e95ac48a9e1958e7ab4f 441 Gene3D G3DSA:3.90.550.10 52 281 1.3E-29 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DA442_15875 ec01afb00cc93c35a7f23256a3cc6316 984 Pfam PF00932 Lamin Tail Domain 20 130 2.3E-15 T 14-10-2018 IPR001322 Lamin tail domain DA442_15875 ec01afb00cc93c35a7f23256a3cc6316 984 SUPERFAMILY SSF56219 473 844 6.77E-35 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DA442_15875 ec01afb00cc93c35a7f23256a3cc6316 984 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 963 983 0.0033 T 14-10-2018 IPR020008 GlyGly-CTERM domain DA442_15875 ec01afb00cc93c35a7f23256a3cc6316 984 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 514 836 5.1E-8 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase DA442_18935 169fb29a36c6eee6f964fc6305d9eac7 324 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 9 312 1.0E-102 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 DA442_18935 169fb29a36c6eee6f964fc6305d9eac7 324 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 43 67 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DA442_18935 169fb29a36c6eee6f964fc6305d9eac7 324 Pfam PF00294 pfkB family carbohydrate kinase 29 298 1.1E-52 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB DA442_18935 169fb29a36c6eee6f964fc6305d9eac7 324 SUPERFAMILY SSF53613 10 297 2.65E-71 T 14-10-2018 IPR029056 Ribokinase-like DA442_18935 169fb29a36c6eee6f964fc6305d9eac7 324 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 9 312 6.9E-103 T 14-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 DA442_18935 169fb29a36c6eee6f964fc6305d9eac7 324 PIRSF PIRSF000535 6 315 5.2E-97 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 DA442_18935 169fb29a36c6eee6f964fc6305d9eac7 324 Gene3D G3DSA:3.40.1190.20 6 315 1.9E-97 T 14-10-2018 IPR029056 Ribokinase-like DA442_13670 a598f9b3dc3866a78a78e69f1d7af5b2 93 TIGRFAM TIGR02762 TraL_TIGR: type IV conjugative transfer system protein TraL 4 91 1.5E-15 T 14-10-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 DA442_13670 a598f9b3dc3866a78a78e69f1d7af5b2 93 Pfam PF07178 TraL protein 5 91 4.1E-29 T 14-10-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 DA442_02460 a33a7457d9def6e51ca8524b74a7fedf 231 Pfam PF01048 Phosphorylase superfamily 2 227 6.3E-49 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 DA442_02460 a33a7457d9def6e51ca8524b74a7fedf 231 Gene3D G3DSA:3.40.50.1580 1 231 4.4E-71 T 14-10-2018 DA442_02460 a33a7457d9def6e51ca8524b74a7fedf 231 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 230 48.007 T 14-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DA442_02460 a33a7457d9def6e51ca8524b74a7fedf 231 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 227 2.1E-100 T 14-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DA442_02460 a33a7457d9def6e51ca8524b74a7fedf 231 SUPERFAMILY SSF53167 1 229 8.51E-74 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 DA442_01855 6ba1fdf00b5e2f2504e6f6f5d70a58d8 363 Gene3D G3DSA:3.40.718.10 1 363 4.9E-157 T 14-10-2018 DA442_01855 6ba1fdf00b5e2f2504e6f6f5d70a58d8 363 SUPERFAMILY SSF53659 4 361 3.84E-123 T 14-10-2018 DA442_01855 6ba1fdf00b5e2f2504e6f6f5d70a58d8 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 6 360 51.219 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 DA442_01855 6ba1fdf00b5e2f2504e6f6f5d70a58d8 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 7 355 1.2E-164 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 DA442_01855 6ba1fdf00b5e2f2504e6f6f5d70a58d8 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 248 267 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 DA442_01855 6ba1fdf00b5e2f2504e6f6f5d70a58d8 363 SMART SM01329 7 356 2.4E-203 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DA442_01855 6ba1fdf00b5e2f2504e6f6f5d70a58d8 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 356 5.4E-136 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DA442_24210 ae3497598a61c371e9f42b9385847d87 201 Gene3D G3DSA:2.60.120.590 6 200 7.4E-70 T 14-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily DA442_24210 ae3497598a61c371e9f42b9385847d87 201 SUPERFAMILY SSF51197 16 199 1.28E-68 T 14-10-2018 DA442_24210 ae3497598a61c371e9f42b9385847d87 201 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 22 196 2.4E-32 T 14-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like DA442_04125 0958fe8a5c4c618545767a4915285fe9 308 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 169 305 2.7E-21 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 DA442_04125 0958fe8a5c4c618545767a4915285fe9 308 PRINTS PR01002 Flagellar protein FlgJ signature 288 306 1.8E-28 T 14-10-2018 DA442_04125 0958fe8a5c4c618545767a4915285fe9 308 PRINTS PR01002 Flagellar protein FlgJ signature 223 244 1.8E-28 T 14-10-2018 DA442_04125 0958fe8a5c4c618545767a4915285fe9 308 PRINTS PR01002 Flagellar protein FlgJ signature 182 200 1.8E-28 T 14-10-2018 DA442_04125 0958fe8a5c4c618545767a4915285fe9 308 PRINTS PR01002 Flagellar protein FlgJ signature 245 266 1.8E-28 T 14-10-2018 DA442_04125 0958fe8a5c4c618545767a4915285fe9 308 PRINTS PR01002 Flagellar protein FlgJ signature 79 101 1.8E-28 T 14-10-2018 DA442_04125 0958fe8a5c4c618545767a4915285fe9 308 PRINTS PR01002 Flagellar protein FlgJ signature 31 54 1.8E-28 T 14-10-2018 DA442_04125 0958fe8a5c4c618545767a4915285fe9 308 Gene3D G3DSA:1.10.530.10 160 306 1.9E-46 T 14-10-2018 DA442_04125 0958fe8a5c4c618545767a4915285fe9 308 Pfam PF10135 Rod binding protein 53 102 3.7E-15 T 14-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal DA442_04125 0958fe8a5c4c618545767a4915285fe9 308 SMART SM00047 146 307 8.5E-50 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 DA442_04125 0958fe8a5c4c618545767a4915285fe9 308 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 10 305 7.5E-129 T 14-10-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 DA442_19255 f57c434b7f12f25c8d6d40a54644b4ba 230 SUPERFAMILY SSF52540 12 228 2.96E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_19255 f57c434b7f12f25c8d6d40a54644b4ba 230 Gene3D G3DSA:3.40.50.300 9 230 9.2E-71 T 14-10-2018 DA442_19255 f57c434b7f12f25c8d6d40a54644b4ba 230 Pfam PF00005 ABC transporter 30 176 1.8E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_19255 f57c434b7f12f25c8d6d40a54644b4ba 230 SMART SM00382 39 225 8.4E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_19255 f57c434b7f12f25c8d6d40a54644b4ba 230 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_16165 33df1b110013ffe7bc7e82044398f948 467 Pfam PF01145 SPFH domain / Band 7 family 45 296 6.3E-39 T 14-10-2018 IPR001107 Band 7 domain DA442_15295 afedd17f091833f2409c576871026b30 161 Gene3D G3DSA:3.30.700.10 10 160 2.0E-5 T 14-10-2018 DA442_15295 afedd17f091833f2409c576871026b30 161 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 30 3.9E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DA442_15295 afedd17f091833f2409c576871026b30 161 SUPERFAMILY SSF54523 10 133 1.96E-9 T 14-10-2018 DA442_15295 afedd17f091833f2409c576871026b30 161 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 29 1.0E-4 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DA442_08330 b33b14eb037e0466fc1302ffdec75f9c 57 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 29.537 T 14-10-2018 IPR007040 Ribosome modulation factor DA442_08330 b33b14eb037e0466fc1302ffdec75f9c 57 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 51 7.0E-23 T 14-10-2018 IPR007040 Ribosome modulation factor DA442_08330 b33b14eb037e0466fc1302ffdec75f9c 57 Pfam PF04957 Ribosome modulation factor 1 54 3.5E-28 T 14-10-2018 IPR007040 Ribosome modulation factor DA442_08330 b33b14eb037e0466fc1302ffdec75f9c 57 Gene3D G3DSA:1.10.10.620 1 57 2.7E-29 T 14-10-2018 IPR023200 Ribosome modulation factor domain superfamily DA442_04160 c806c36e451c85a1b3fae3e1c57d7d4f 374 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 140 3.1E-33 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DA442_04160 c806c36e451c85a1b3fae3e1c57d7d4f 374 Gene3D G3DSA:1.20.58.1830 339 373 3.1E-34 T 14-10-2018 DA442_04160 c806c36e451c85a1b3fae3e1c57d7d4f 374 Gene3D G3DSA:1.20.58.1830 5 32 2.5E-57 T 14-10-2018 DA442_04160 c806c36e451c85a1b3fae3e1c57d7d4f 374 Pfam PF00700 Bacterial flagellin C-terminal helical region 289 373 4.6E-20 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DA442_04160 c806c36e451c85a1b3fae3e1c57d7d4f 374 SUPERFAMILY SSF64518 1 373 6.67E-76 T 14-10-2018 DA442_04160 c806c36e451c85a1b3fae3e1c57d7d4f 374 Pfam PF07196 Flagellin hook IN motif 200 245 2.4E-7 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 DA442_04160 c806c36e451c85a1b3fae3e1c57d7d4f 374 Gene3D G3DSA:2.170.280.10 185 281 3.1E-34 T 14-10-2018 DA442_04160 c806c36e451c85a1b3fae3e1c57d7d4f 374 Gene3D G3DSA:1.20.1330.10 44 165 2.5E-57 T 14-10-2018 DA442_04160 c806c36e451c85a1b3fae3e1c57d7d4f 374 Gene3D G3DSA:1.20.1330.10 282 333 3.1E-34 T 14-10-2018 DA442_04160 c806c36e451c85a1b3fae3e1c57d7d4f 374 PRINTS PR00207 Flagellin signature 36 53 2.2E-21 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DA442_04160 c806c36e451c85a1b3fae3e1c57d7d4f 374 PRINTS PR00207 Flagellin signature 110 133 2.2E-21 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DA442_04160 c806c36e451c85a1b3fae3e1c57d7d4f 374 PRINTS PR00207 Flagellin signature 75 94 2.2E-21 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DA442_12400 cb92df075d3936ba76a46028e37abbf4 137 Pfam PF04347 Flagellar biosynthesis protein, FliO 54 131 1.5E-19 T 14-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 DA442_12400 cb92df075d3936ba76a46028e37abbf4 137 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 42 109 3.8E-22 T 14-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 DA442_04525 423b46b2e34045e68c498efb02cafd9c 636 Pfam PF13307 Helicase C-terminal domain 462 619 5.8E-34 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 DA442_04525 423b46b2e34045e68c498efb02cafd9c 636 SMART SM00487 17 310 0.0029 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DA442_04525 423b46b2e34045e68c498efb02cafd9c 636 SMART SM00491 477 606 2.0E-45 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 DA442_04525 423b46b2e34045e68c498efb02cafd9c 636 SUPERFAMILY SSF52540 14 236 1.26E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_04525 423b46b2e34045e68c498efb02cafd9c 636 Pfam PF04851 Type III restriction enzyme, res subunit 19 235 2.6E-5 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 DA442_04525 423b46b2e34045e68c498efb02cafd9c 636 SUPERFAMILY SSF52540 42 601 2.66E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_04525 423b46b2e34045e68c498efb02cafd9c 636 Gene3D G3DSA:3.40.50.300 19 286 1.4E-49 T 14-10-2018 DA442_04525 423b46b2e34045e68c498efb02cafd9c 636 Gene3D G3DSA:3.40.50.300 445 635 5.6E-36 T 14-10-2018 DA442_03050 e2a2caa7621b3c05edfae58d934d8b92 350 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 346 47.018 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 DA442_03050 e2a2caa7621b3c05edfae58d934d8b92 350 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 345 1.2E-159 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 DA442_03050 e2a2caa7621b3c05edfae58d934d8b92 350 SUPERFAMILY SSF111337 1 345 3.27E-138 T 14-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 DA442_03050 e2a2caa7621b3c05edfae58d934d8b92 350 Pfam PF02547 Queuosine biosynthesis protein 3 345 2.0E-133 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 DA442_03050 e2a2caa7621b3c05edfae58d934d8b92 350 Gene3D G3DSA:2.40.10.240 64 163 1.3E-117 T 14-10-2018 DA442_03050 e2a2caa7621b3c05edfae58d934d8b92 350 Gene3D G3DSA:3.40.1780.10 14 345 1.3E-117 T 14-10-2018 DA442_25425 d3f5a692a810974b301fad35a3f36c4e 634 PRINTS PR00723 Subtilisin serine protease family (S8) signature 234 247 9.6E-14 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related DA442_25425 d3f5a692a810974b301fad35a3f36c4e 634 PRINTS PR00723 Subtilisin serine protease family (S8) signature 186 205 9.6E-14 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related DA442_25425 d3f5a692a810974b301fad35a3f36c4e 634 PRINTS PR00723 Subtilisin serine protease family (S8) signature 430 446 9.6E-14 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related DA442_25425 d3f5a692a810974b301fad35a3f36c4e 634 Pfam PF00082 Subtilase family 187 484 1.5E-39 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 DA442_25425 d3f5a692a810974b301fad35a3f36c4e 634 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 238 248 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site DA442_25425 d3f5a692a810974b301fad35a3f36c4e 634 Gene3D G3DSA:3.40.50.200 132 512 1.5E-74 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 DA442_25425 d3f5a692a810974b301fad35a3f36c4e 634 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 431 441 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site DA442_25425 d3f5a692a810974b301fad35a3f36c4e 634 SUPERFAMILY SSF52743 170 508 4.58E-64 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 DA442_10645 f148ded0e7a8cd0f83c23f1f44ea8b79 199 Pfam PF00293 NUDIX domain 40 161 1.2E-13 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DA442_10645 f148ded0e7a8cd0f83c23f1f44ea8b79 199 SUPERFAMILY SSF55811 31 189 9.88E-34 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DA442_10645 f148ded0e7a8cd0f83c23f1f44ea8b79 199 Gene3D G3DSA:3.90.79.10 20 195 8.7E-48 T 14-10-2018 DA442_19995 b968cbc33a5cf3663e9d4ddc12223576 607 Pfam PF05947 Type VI secretion system, TssF 6 605 3.2E-178 T 14-10-2018 IPR010272 Type VI secretion system, TssF-like DA442_19995 b968cbc33a5cf3663e9d4ddc12223576 607 PIRSF PIRSF028304 1 606 6.1E-152 T 14-10-2018 IPR010272 Type VI secretion system, TssF-like DA442_19995 b968cbc33a5cf3663e9d4ddc12223576 607 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 607 1.5E-199 T 14-10-2018 IPR010272 Type VI secretion system, TssF-like DA442_23655 793e44cc84c4f498d4f88673c3dcc39d 103 Gene3D G3DSA:2.60.120.10 13 103 7.7E-38 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DA442_23655 793e44cc84c4f498d4f88673c3dcc39d 103 Pfam PF07883 Cupin domain 42 101 1.3E-10 T 14-10-2018 IPR013096 Cupin 2, conserved barrel DA442_23655 793e44cc84c4f498d4f88673c3dcc39d 103 SUPERFAMILY SSF51182 2 102 3.34E-18 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DA442_19215 4dbde4d7bea9a3bd4af85a2ca7e03f32 110 Gene3D G3DSA:3.30.70.120 1 107 1.2E-35 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DA442_19215 4dbde4d7bea9a3bd4af85a2ca7e03f32 110 Pfam PF03091 CutA1 divalent ion tolerance protein 8 104 9.4E-33 T 14-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 DA442_19215 4dbde4d7bea9a3bd4af85a2ca7e03f32 110 SUPERFAMILY SSF54913 4 106 2.63E-33 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta DA442_15755 83c2b1a4a8a0ececc59178eca1086de0 118 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 3 118 5.8E-46 T 14-10-2018 IPR017462 Sulphur relay, TusC/DsrF DA442_15755 83c2b1a4a8a0ececc59178eca1086de0 118 SUPERFAMILY SSF75169 3 118 7.2E-36 T 14-10-2018 IPR027396 DsrEFH-like DA442_15755 83c2b1a4a8a0ececc59178eca1086de0 118 Gene3D G3DSA:3.40.1260.10 1 118 3.9E-38 T 14-10-2018 IPR027396 DsrEFH-like DA442_15755 83c2b1a4a8a0ececc59178eca1086de0 118 Pfam PF02635 DsrE/DsrF-like family 4 118 2.7E-25 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein DA442_01450 f4391e6104c2106448fbc151e389915d 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.699 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01450 f4391e6104c2106448fbc151e389915d 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 14-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01450 f4391e6104c2106448fbc151e389915d 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 8.8E-40 T 14-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 DA442_01450 f4391e6104c2106448fbc151e389915d 110 SUPERFAMILY SSF54843 1 109 9.42E-45 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 DA442_01450 f4391e6104c2106448fbc151e389915d 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 1.8E-50 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01450 f4391e6104c2106448fbc151e389915d 110 Gene3D G3DSA:3.90.470.10 1 110 1.5E-48 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 DA442_01125 3a29e504ef2aca921bdd35d1887e3420 439 Pfam PF00202 Aminotransferase class-III 32 340 5.9E-36 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DA442_01125 3a29e504ef2aca921bdd35d1887e3420 439 Gene3D G3DSA:3.40.640.10 67 316 4.9E-104 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_01125 3a29e504ef2aca921bdd35d1887e3420 439 Gene3D G3DSA:3.90.1150.10 7 403 4.9E-104 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DA442_01125 3a29e504ef2aca921bdd35d1887e3420 439 SUPERFAMILY SSF53383 25 411 3.06E-74 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_22215 afc2393bbd57818cc0613b4904762af8 242 Gene3D G3DSA:1.10.1740.10 14 98 1.4E-17 T 14-10-2018 DA442_22215 afc2393bbd57818cc0613b4904762af8 242 SUPERFAMILY SSF88659 102 173 1.6E-12 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DA442_22215 afc2393bbd57818cc0613b4904762af8 242 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 239 2.7E-25 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DA442_22215 afc2393bbd57818cc0613b4904762af8 242 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 28 240 6.5E-76 T 14-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 DA442_22215 afc2393bbd57818cc0613b4904762af8 242 Gene3D G3DSA:1.20.140.160 99 242 3.9E-32 T 14-10-2018 DA442_22215 afc2393bbd57818cc0613b4904762af8 242 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 210 236 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DA442_22215 afc2393bbd57818cc0613b4904762af8 242 SUPERFAMILY SSF88659 161 240 1.23E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DA442_22215 afc2393bbd57818cc0613b4904762af8 242 SUPERFAMILY SSF88946 22 100 3.14E-16 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DA442_22215 afc2393bbd57818cc0613b4904762af8 242 Pfam PF04545 Sigma-70, region 4 189 236 2.2E-9 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 DA442_22215 afc2393bbd57818cc0613b4904762af8 242 Pfam PF04542 Sigma-70 region 2 28 101 1.7E-10 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DA442_00495 6f893c82d99df8de1eb984497c1bac53 259 SUPERFAMILY SSF53335 27 257 4.18E-53 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_00495 6f893c82d99df8de1eb984497c1bac53 259 Gene3D G3DSA:3.40.50.150 39 259 2.7E-75 T 14-10-2018 DA442_00495 6f893c82d99df8de1eb984497c1bac53 259 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 24 258 38.455 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 DA442_00495 6f893c82d99df8de1eb984497c1bac53 259 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 166 180 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 DA442_00495 6f893c82d99df8de1eb984497c1bac53 259 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 33 258 7.7E-83 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 DA442_00495 6f893c82d99df8de1eb984497c1bac53 259 Pfam PF01209 ubiE/COQ5 methyltransferase family 25 258 3.4E-103 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 DA442_00495 6f893c82d99df8de1eb984497c1bac53 259 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 44 59 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 DA442_10665 e9f187ba34aba4298a3d9462d6d8eeed 192 Pfam PF00583 Acetyltransferase (GNAT) family 56 170 1.8E-5 T 14-10-2018 IPR000182 GNAT domain DA442_10665 e9f187ba34aba4298a3d9462d6d8eeed 192 SUPERFAMILY SSF55729 38 188 2.52E-13 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_10665 e9f187ba34aba4298a3d9462d6d8eeed 192 Gene3D G3DSA:3.40.630.30 35 192 1.6E-14 T 14-10-2018 DA442_12055 abcad3183e20015c5a8fb3dc790d20a1 425 Pfam PF03313 Serine dehydratase alpha chain 126 420 5.5E-51 T 14-10-2018 IPR005130 Serine dehydratase-like, alpha subunit DA442_12055 abcad3183e20015c5a8fb3dc790d20a1 425 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 4 425 34.796 T 14-10-2018 IPR021144 Uncharacterised protein family UPF0597 DA442_12055 abcad3183e20015c5a8fb3dc790d20a1 425 PIRSF PIRSF006054 1 425 9.0E-192 T 14-10-2018 IPR021144 Uncharacterised protein family UPF0597 DA442_18065 d0da6e655ce71cc2bd9cbfcc3917f229 242 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_18065 d0da6e655ce71cc2bd9cbfcc3917f229 242 SMART SM00382 27 218 3.8E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_18065 d0da6e655ce71cc2bd9cbfcc3917f229 242 Pfam PF00005 ABC transporter 18 170 1.2E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_18065 d0da6e655ce71cc2bd9cbfcc3917f229 242 Gene3D G3DSA:3.40.50.300 1 242 2.7E-72 T 14-10-2018 DA442_18065 d0da6e655ce71cc2bd9cbfcc3917f229 242 PIRSF PIRSF039085 1 242 1.2E-91 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 DA442_18065 d0da6e655ce71cc2bd9cbfcc3917f229 242 SUPERFAMILY SSF52540 3 235 1.64E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_11610 607d37dd97d3d3a8a6397380dc1efcf7 528 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 528 375.726 T 14-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 DA442_11610 607d37dd97d3d3a8a6397380dc1efcf7 528 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 514 0.0 T 14-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 DA442_11610 607d37dd97d3d3a8a6397380dc1efcf7 528 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 516 0.0 T 14-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 DA442_25145 854a4c3db31b696f42732e62b061911f 170 Gene3D G3DSA:2.60.120.10 13 159 9.8E-48 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DA442_25145 854a4c3db31b696f42732e62b061911f 170 SUPERFAMILY SSF51182 28 140 1.37E-22 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DA442_25145 854a4c3db31b696f42732e62b061911f 170 Pfam PF12973 ChrR Cupin-like domain 28 105 4.8E-8 T 14-10-2018 IPR025979 ChrR-like cupin domain DA442_20270 344308d1989534ef0b4b0b609637cabe 292 Gene3D G3DSA:3.40.50.2300 29 278 9.3E-98 T 14-10-2018 DA442_20270 344308d1989534ef0b4b0b609637cabe 292 Gene3D G3DSA:3.40.50.2300 125 259 9.3E-98 T 14-10-2018 DA442_20270 344308d1989534ef0b4b0b609637cabe 292 Pfam PF13407 Periplasmic binding protein domain 28 278 5.8E-61 T 14-10-2018 IPR025997 Periplasmic binding protein DA442_20270 344308d1989534ef0b4b0b609637cabe 292 SUPERFAMILY SSF53822 6 292 1.8E-87 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DA442_16560 7757fed13fa230a9ee3c6bd530074762 163 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 3 153 2.5E-55 T 14-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 DA442_16560 7757fed13fa230a9ee3c6bd530074762 163 Gene3D G3DSA:1.20.120.1370 1 156 1.5E-52 T 14-10-2018 IPR038309 Rsd/AlgQ superfamily DA442_16560 7757fed13fa230a9ee3c6bd530074762 163 PIRSF PIRSF016548 3 163 3.6E-70 T 14-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 DA442_01900 5d2dbaa3ecab8f3f0e963a446b11de62 164 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 159 2.1E-63 T 14-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 DA442_01900 5d2dbaa3ecab8f3f0e963a446b11de62 164 Gene3D G3DSA:3.30.70.1150 80 157 5.6E-28 T 14-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal DA442_01900 5d2dbaa3ecab8f3f0e963a446b11de62 164 Gene3D G3DSA:3.30.70.260 1 78 4.0E-33 T 14-10-2018 DA442_01900 5d2dbaa3ecab8f3f0e963a446b11de62 164 SUPERFAMILY SSF55021 79 162 6.51E-27 T 14-10-2018 DA442_01900 5d2dbaa3ecab8f3f0e963a446b11de62 164 Pfam PF13710 ACT domain 11 73 9.8E-18 T 14-10-2018 DA442_01900 5d2dbaa3ecab8f3f0e963a446b11de62 164 Pfam PF10369 Small subunit of acetolactate synthase 84 158 2.5E-25 T 14-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 DA442_01900 5d2dbaa3ecab8f3f0e963a446b11de62 164 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 75 2.0E-37 T 14-10-2018 DA442_01900 5d2dbaa3ecab8f3f0e963a446b11de62 164 SUPERFAMILY SSF55021 1 75 2.69E-22 T 14-10-2018 DA442_20505 a039d0b519f7e74c001d4f94053fc22e 309 Gene3D G3DSA:3.20.20.70 8 305 2.4E-128 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_20505 a039d0b519f7e74c001d4f94053fc22e 309 Pfam PF00682 HMGL-like 14 283 1.7E-51 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 DA442_20505 a039d0b519f7e74c001d4f94053fc22e 309 SUPERFAMILY SSF51569 10 299 6.41E-74 T 14-10-2018 DA442_17310 3a2ab64676fc6eb4c4cdc4225c143439 159 Pfam PF04361 Protein of unknown function (DUF494) 2 159 4.9E-59 T 14-10-2018 IPR007456 Smg DA442_17310 3a2ab64676fc6eb4c4cdc4225c143439 159 Hamap MF_00598 Protein Smg [smg]. 2 159 32.554 T 14-10-2018 IPR007456 Smg DA442_10890 2122a01d08390bba4daf07692a6c0eb2 377 Gene3D G3DSA:1.10.620.20 2 341 4.6E-144 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 DA442_10890 2122a01d08390bba4daf07692a6c0eb2 377 Pfam PF00268 Ribonucleotide reductase, small chain 34 333 4.5E-49 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DA442_10890 2122a01d08390bba4daf07692a6c0eb2 377 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 14-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DA442_10890 2122a01d08390bba4daf07692a6c0eb2 377 SUPERFAMILY SSF47240 3 341 1.22E-111 T 14-10-2018 IPR009078 Ferritin-like superfamily DA442_20285 4a38810c73f06e6aa110902a4237b027 133 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 133 29.3 T 14-10-2018 IPR023064 D-ribose pyranase GO:0016872 DA442_20285 4a38810c73f06e6aa110902a4237b027 133 SUPERFAMILY SSF102546 1 133 1.15E-41 T 14-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 DA442_20285 4a38810c73f06e6aa110902a4237b027 133 Gene3D G3DSA:3.40.1650.10 2 130 2.9E-38 T 14-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 DA442_20285 4a38810c73f06e6aa110902a4237b027 133 Pfam PF05025 RbsD / FucU transport protein family 1 132 3.0E-46 T 14-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 DA442_25840 3c633bd7b951e21a3b2d504c2e6a181c 278 Gene3D G3DSA:1.10.10.60 236 278 4.6E-15 T 14-10-2018 DA442_25840 3c633bd7b951e21a3b2d504c2e6a181c 278 Pfam PF02311 AraC-like ligand binding domain 21 153 8.3E-26 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 DA442_25840 3c633bd7b951e21a3b2d504c2e6a181c 278 SUPERFAMILY SSF46689 230 275 2.02E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_25840 3c633bd7b951e21a3b2d504c2e6a181c 278 SMART SM00342 193 275 7.5E-31 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_25840 3c633bd7b951e21a3b2d504c2e6a181c 278 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 230 271 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DA442_25840 3c633bd7b951e21a3b2d504c2e6a181c 278 Pfam PF12833 Helix-turn-helix domain 199 276 4.1E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_25840 3c633bd7b951e21a3b2d504c2e6a181c 278 SUPERFAMILY SSF46689 177 227 2.33E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_25840 3c633bd7b951e21a3b2d504c2e6a181c 278 SUPERFAMILY SSF51215 34 159 1.83E-18 T 14-10-2018 IPR037923 Transcription regulator HTH-like DA442_25840 3c633bd7b951e21a3b2d504c2e6a181c 278 Gene3D G3DSA:1.10.10.60 174 235 4.6E-16 T 14-10-2018 DA442_12335 9c352142fcedc81c4425bf1d30748e32 259 SUPERFAMILY SSF52540 1 252 5.63E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_12335 9c352142fcedc81c4425bf1d30748e32 259 Gene3D G3DSA:3.40.50.300 1 254 9.7E-65 T 14-10-2018 DA442_12335 9c352142fcedc81c4425bf1d30748e32 259 Pfam PF13614 AAA domain 4 174 2.4E-50 T 14-10-2018 IPR025669 AAA domain DA442_25845 5f06b316249994294522b1c693ec3cc5 210 PIRSF PIRSF006324 1 209 1.6E-58 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DA442_25845 5f06b316249994294522b1c693ec3cc5 210 Pfam PF01810 LysE type translocator 16 205 6.0E-28 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DA442_13015 23ea968296aafa651abd0614b5ae437b 198 Gene3D G3DSA:2.30.130.40 1 111 3.6E-30 T 14-10-2018 DA442_13015 23ea968296aafa651abd0614b5ae437b 198 SMART SM00464 3 190 0.0051 T 14-10-2018 IPR003111 Lon, substrate-binding domain DA442_13015 23ea968296aafa651abd0614b5ae437b 198 SUPERFAMILY SSF88697 3 189 1.59E-46 T 14-10-2018 IPR015947 PUA-like superfamily DA442_13015 23ea968296aafa651abd0614b5ae437b 198 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 3 118 2.1E-16 T 14-10-2018 IPR003111 Lon, substrate-binding domain DA442_09720 2a752ef5d322358c43c5b6f2019c3401 220 Pfam PF13643 Domain of unknown function (DUF4145) 120 207 1.4E-6 T 14-10-2018 IPR025285 Domain of unknown function DUF4145 DA442_08035 0649506d1925101baa540ab1095cd4b6 302 Gene3D G3DSA:3.30.420.40 119 290 2.5E-100 T 14-10-2018 DA442_08035 0649506d1925101baa540ab1095cd4b6 302 SUPERFAMILY SSF53067 1 299 1.75E-57 T 14-10-2018 DA442_08035 0649506d1925101baa540ab1095cd4b6 302 Pfam PF00480 ROK family 2 300 3.9E-74 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DA442_08035 0649506d1925101baa540ab1095cd4b6 302 Gene3D G3DSA:3.30.420.40 4 297 2.5E-100 T 14-10-2018 DA442_08035 0649506d1925101baa540ab1095cd4b6 302 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 302 64.273 T 14-10-2018 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906 DA442_08035 0649506d1925101baa540ab1095cd4b6 302 ProSitePatterns PS01125 ROK family signature. 130 157 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DA442_02980 a545de26af472e7abea36db0266f468e 557 SUPERFAMILY SSF161098 283 538 1.96E-35 T 14-10-2018 IPR035906 MetI-like superfamily DA442_02980 a545de26af472e7abea36db0266f468e 557 Gene3D G3DSA:1.10.3720.10 286 550 1.3E-29 T 14-10-2018 IPR035906 MetI-like superfamily DA442_02980 a545de26af472e7abea36db0266f468e 557 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 288 548 4.1E-76 T 14-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 DA442_02980 a545de26af472e7abea36db0266f468e 557 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 324 476 1.5E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DA442_15830 bcd2d8857f8a3cb3fa29d37fe29131a0 335 Pfam PF00561 alpha/beta hydrolase fold 61 301 3.1E-19 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DA442_15830 bcd2d8857f8a3cb3fa29d37fe29131a0 335 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 227 268 - T 14-10-2018 IPR000952 AB hydrolase 4, conserved site DA442_15830 bcd2d8857f8a3cb3fa29d37fe29131a0 335 PIRSF PIRSF005211 1 334 2.4E-106 T 14-10-2018 IPR012020 AB hydrolase 4 family DA442_15830 bcd2d8857f8a3cb3fa29d37fe29131a0 335 SUPERFAMILY SSF53474 32 299 8.04E-39 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_15830 bcd2d8857f8a3cb3fa29d37fe29131a0 335 Gene3D G3DSA:3.40.50.1820 34 312 4.9E-26 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_18160 e8169f9bebec9c882e46ce8688860519 302 Gene3D G3DSA:3.40.50.1980 171 274 2.0E-87 T 14-10-2018 DA442_18160 e8169f9bebec9c882e46ce8688860519 302 Pfam PF01497 Periplasmic binding protein 64 275 9.4E-20 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain DA442_18160 e8169f9bebec9c882e46ce8688860519 302 Gene3D G3DSA:3.40.50.1980 25 280 2.0E-87 T 14-10-2018 DA442_18160 e8169f9bebec9c882e46ce8688860519 302 SUPERFAMILY SSF53807 21 282 5.56E-58 T 14-10-2018 DA442_16130 f8d27142aa74d06966cb35a8c19a0dbe 124 Pfam PF04892 VanZ like family 33 109 9.8E-9 T 14-10-2018 IPR006976 VanZ-like DA442_01290 1ac9b7d4095ed2a4eee7e5100346f101 475 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 163 259 4.3E-10 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DA442_01290 1ac9b7d4095ed2a4eee7e5100346f101 475 Gene3D G3DSA:3.40.120.10 9 153 1.4E-41 T 14-10-2018 DA442_01290 1ac9b7d4095ed2a4eee7e5100346f101 475 SUPERFAMILY SSF55957 418 472 1.31E-10 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DA442_01290 1ac9b7d4095ed2a4eee7e5100346f101 475 SUPERFAMILY SSF53738 247 368 8.24E-5 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DA442_01290 1ac9b7d4095ed2a4eee7e5100346f101 475 Gene3D G3DSA:3.30.310.50 378 475 4.2E-25 T 14-10-2018 DA442_01290 1ac9b7d4095ed2a4eee7e5100346f101 475 SUPERFAMILY SSF53738 13 171 3.85E-32 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DA442_01290 1ac9b7d4095ed2a4eee7e5100346f101 475 Gene3D G3DSA:3.40.120.10 260 377 5.5E-38 T 14-10-2018 DA442_01290 1ac9b7d4095ed2a4eee7e5100346f101 475 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 407 464 1.1E-6 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DA442_01290 1ac9b7d4095ed2a4eee7e5100346f101 475 SUPERFAMILY SSF53738 161 261 1.02E-13 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DA442_01290 1ac9b7d4095ed2a4eee7e5100346f101 475 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 264 380 2.1E-8 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DA442_01290 1ac9b7d4095ed2a4eee7e5100346f101 475 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 16 138 3.5E-28 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DA442_01290 1ac9b7d4095ed2a4eee7e5100346f101 475 Gene3D G3DSA:3.40.120.10 179 259 8.1E-32 T 14-10-2018 DA442_08830 e3346098a1d43c744bd3aaa03fb94d68 248 Gene3D G3DSA:3.30.70.1530 20 91 5.0E-25 T 14-10-2018 DA442_08830 e3346098a1d43c744bd3aaa03fb94d68 248 TIGRFAM TIGR02544 III_secr_YscJ: type III secretion apparatus lipoprotein, YscJ/HrcJ family 7 194 3.3E-70 T 14-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 DA442_08830 e3346098a1d43c744bd3aaa03fb94d68 248 Gene3D G3DSA:3.30.300.30 93 201 2.3E-39 T 14-10-2018 DA442_08830 e3346098a1d43c744bd3aaa03fb94d68 248 Pfam PF01514 Secretory protein of YscJ/FliF family 11 188 1.6E-23 T 14-10-2018 IPR006182 Secretory protein YscJ/FliF DA442_08830 e3346098a1d43c744bd3aaa03fb94d68 248 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 117 130 5.9E-29 T 14-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 DA442_08830 e3346098a1d43c744bd3aaa03fb94d68 248 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 77 90 5.9E-29 T 14-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 DA442_08830 e3346098a1d43c744bd3aaa03fb94d68 248 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 97 112 5.9E-29 T 14-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 DA442_08830 e3346098a1d43c744bd3aaa03fb94d68 248 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 25 35 5.9E-29 T 14-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 DA442_08830 e3346098a1d43c744bd3aaa03fb94d68 248 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 166 178 5.9E-29 T 14-10-2018 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 DA442_00545 dcc8e7aa4e5fb90f00f2d7a88bbb3716 142 SUPERFAMILY SSF55729 1 126 3.21E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_00545 dcc8e7aa4e5fb90f00f2d7a88bbb3716 142 Gene3D G3DSA:3.40.630.30 1 141 1.6E-17 T 14-10-2018 DA442_00545 dcc8e7aa4e5fb90f00f2d7a88bbb3716 142 Pfam PF00583 Acetyltransferase (GNAT) family 30 114 1.1E-8 T 14-10-2018 IPR000182 GNAT domain DA442_01770 aca169dde826229a57ac143cbe572581 333 Gene3D G3DSA:1.10.600.10 4 333 1.7E-119 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily DA442_01770 aca169dde826229a57ac143cbe572581 333 Pfam PF00348 Polyprenyl synthetase 42 282 8.1E-73 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 DA442_01770 aca169dde826229a57ac143cbe572581 333 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 91 105 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site DA442_01770 aca169dde826229a57ac143cbe572581 333 SUPERFAMILY SSF48576 12 332 6.84E-99 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily DA442_01770 aca169dde826229a57ac143cbe572581 333 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site DA442_15405 269220959bf36ebeac4a24423f97314c 444 Pfam PF00999 Sodium/hydrogen exchanger family 14 416 1.5E-54 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 DA442_17095 92b923dd890bdb31661913b91e57b95f 222 Pfam PF02592 Putative vitamin uptake transporter 43 199 7.2E-38 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 DA442_17095 92b923dd890bdb31661913b91e57b95f 222 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 13 204 3.9E-62 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 DA442_17095 92b923dd890bdb31661913b91e57b95f 222 Hamap MF_02088 Probable queuosine precursor transporter. 7 214 15.432 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 DA442_18205 47f566810dfe9d82466cfc9c69a6dad0 83 Gene3D G3DSA:1.20.1280.290 26 76 1.7E-6 T 14-10-2018 DA442_18205 47f566810dfe9d82466cfc9c69a6dad0 83 Pfam PF10688 Bacterial inner membrane protein 4 73 2.8E-9 T 14-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV DA442_18205 47f566810dfe9d82466cfc9c69a6dad0 83 ProDom PD058023 TRANSMEMBRANE SO1069 MEMBRANE VCA0743 SO4196 VVA0623 VPA0666 HI1736 PM0424 3 73 4.0E-33 T 14-10-2018 IPR020137 Uncharacterised protein family HI1736 DA442_08690 1df69db4e8a222ce27d6acaf946ac0a1 137 TIGRFAM TIGR02572 LcrR: type III secretion system regulator LcrR 1 137 4.2E-66 T 14-10-2018 IPR013405 Type III secretion system regulator, LcrR DA442_08690 1df69db4e8a222ce27d6acaf946ac0a1 137 Pfam PF09621 Type III secretion system regulator (LcrR) 2 137 2.2E-63 T 14-10-2018 IPR022797 Type III secretion system regulator LcrR/Chaperone CesD2 DA442_06425 5f4870eb3ff8b7cfa743cb95377bf1bc 219 Pfam PF10014 2OG-Fe dioxygenase 25 209 1.5E-54 T 14-10-2018 IPR018724 2OG-Fe dioxygenase DA442_06425 5f4870eb3ff8b7cfa743cb95377bf1bc 219 Gene3D G3DSA:2.60.120.620 1 216 3.2E-54 T 14-10-2018 DA442_12520 b76025886f4d9bf0bd970417a802dfc9 118 Pfam PF11169 Protein of unknown function (DUF2956) 12 115 1.4E-43 T 14-10-2018 IPR021339 Protein of unknown function DUF2956 DA442_04090 b9450fee049d80b2fa1cc0a2db82576c 235 Pfam PF13860 FlgD Ig-like domain 118 184 9.5E-19 T 14-10-2018 IPR025965 FlgD Ig-like domain DA442_04090 b9450fee049d80b2fa1cc0a2db82576c 235 Pfam PF13861 FlgD Tudor-like domain 93 229 1.9E-15 T 14-10-2018 IPR025963 FlgD Tudor-like domain DA442_04090 b9450fee049d80b2fa1cc0a2db82576c 235 Gene3D G3DSA:2.30.30.910 98 222 7.2E-36 T 14-10-2018 DA442_04090 b9450fee049d80b2fa1cc0a2db82576c 235 Gene3D G3DSA:2.60.40.4070 110 196 7.2E-36 T 14-10-2018 DA442_04090 b9450fee049d80b2fa1cc0a2db82576c 235 Pfam PF03963 Flagellar hook capping protein - N-terminal region 22 85 1.4E-21 T 14-10-2018 IPR005648 Flagellar hook capping protein DA442_16170 157832b0b04d1ded56020c858776b506 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 14-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site DA442_16170 157832b0b04d1ded56020c858776b506 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 49.455 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 DA442_16170 157832b0b04d1ded56020c858776b506 188 SMART SM00841 131 186 3.0E-31 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 DA442_16170 157832b0b04d1ded56020c858776b506 188 SUPERFAMILY SSF50249 70 128 1.93E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_16170 157832b0b04d1ded56020c858776b506 188 PIRSF PIRSF005901 2 188 3.1E-63 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP DA442_16170 157832b0b04d1ded56020c858776b506 188 SUPERFAMILY SSF50104 2 64 2.26E-20 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily DA442_16170 157832b0b04d1ded56020c858776b506 188 TIGRFAM TIGR00038 efp: translation elongation factor P 5 187 2.1E-77 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 DA442_16170 157832b0b04d1ded56020c858776b506 188 SUPERFAMILY SSF50249 130 187 4.63E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_16170 157832b0b04d1ded56020c858776b506 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 1.3E-25 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 DA442_16170 157832b0b04d1ded56020c858776b506 188 Gene3D G3DSA:2.30.30.30 1 64 9.0E-26 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 DA442_16170 157832b0b04d1ded56020c858776b506 188 Gene3D G3DSA:2.40.50.140 130 188 2.5E-27 T 14-10-2018 DA442_16170 157832b0b04d1ded56020c858776b506 188 Gene3D G3DSA:2.40.50.140 66 129 4.7E-29 T 14-10-2018 DA442_16170 157832b0b04d1ded56020c858776b506 188 SMART SM01185 69 123 9.4E-26 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 DA442_16170 157832b0b04d1ded56020c858776b506 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 1.2E-22 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 DA442_16170 157832b0b04d1ded56020c858776b506 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 61 3.4E-24 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like DA442_22035 e8b535cbcc385c7a9a0e26983cfc6cf1 227 Pfam PF06468 Spondin_N 40 157 4.7E-10 T 14-10-2018 IPR009465 Spondin, N-terminal Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 DA442_22035 e8b535cbcc385c7a9a0e26983cfc6cf1 227 Gene3D G3DSA:2.60.40.2130 27 168 1.4E-12 T 14-10-2018 IPR038678 Spondin, N-terminal domain superfamily Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 DA442_11935 1c900171c0aeb3d7458a8b89bb35c98d 654 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 321 336 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 DA442_11935 1c900171c0aeb3d7458a8b89bb35c98d 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 526 540 3.9E-26 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DA442_11935 1c900171c0aeb3d7458a8b89bb35c98d 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 99 112 3.9E-26 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DA442_11935 1c900171c0aeb3d7458a8b89bb35c98d 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 327 336 3.9E-26 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DA442_11935 1c900171c0aeb3d7458a8b89bb35c98d 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 408 424 3.9E-26 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DA442_11935 1c900171c0aeb3d7458a8b89bb35c98d 654 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 194 212 3.9E-26 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DA442_11935 1c900171c0aeb3d7458a8b89bb35c98d 654 Pfam PF01751 Toprim domain 4 132 1.3E-16 T 14-10-2018 IPR006171 TOPRIM domain DA442_11935 1c900171c0aeb3d7458a8b89bb35c98d 654 Pfam PF01131 DNA topoisomerase 159 598 7.1E-115 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DA442_11935 1c900171c0aeb3d7458a8b89bb35c98d 654 SMART SM00436 129 224 2.7E-31 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 DA442_11935 1c900171c0aeb3d7458a8b89bb35c98d 654 Gene3D G3DSA:1.10.290.10 293 422 1.7E-165 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 DA442_11935 1c900171c0aeb3d7458a8b89bb35c98d 654 SMART SM00437 284 563 5.5E-87 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 DA442_11935 1c900171c0aeb3d7458a8b89bb35c98d 654 Hamap MF_00953 DNA topoisomerase 3 [topB]. 2 651 64.313 T 14-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 DA442_11935 1c900171c0aeb3d7458a8b89bb35c98d 654 Gene3D G3DSA:3.40.50.140 2 157 4.9E-61 T 14-10-2018 DA442_11935 1c900171c0aeb3d7458a8b89bb35c98d 654 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 628 1.6E-238 T 14-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 DA442_11935 1c900171c0aeb3d7458a8b89bb35c98d 654 SMART SM00493 2 125 3.7E-28 T 14-10-2018 IPR006171 TOPRIM domain DA442_11935 1c900171c0aeb3d7458a8b89bb35c98d 654 SUPERFAMILY SSF56712 3 612 2.35E-183 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain DA442_11935 1c900171c0aeb3d7458a8b89bb35c98d 654 Gene3D G3DSA:1.10.460.10 163 605 1.7E-165 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 DA442_11935 1c900171c0aeb3d7458a8b89bb35c98d 654 Gene3D G3DSA:2.70.20.10 218 493 1.7E-165 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 DA442_02855 a43df60f994572fbe48595a9551e420b 242 Pfam PF13525 Outer membrane lipoprotein 26 232 1.5E-79 T 14-10-2018 IPR039565 Outer membrane lipoprotein BamD-like DA442_02855 a43df60f994572fbe48595a9551e420b 242 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 240 37.401 T 14-10-2018 IPR017689 Outer membrane protein assembly factor BamD DA442_02855 a43df60f994572fbe48595a9551e420b 242 Gene3D G3DSA:1.25.40.10 28 242 6.5E-54 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_02855 a43df60f994572fbe48595a9551e420b 242 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 5 239 3.6E-80 T 14-10-2018 IPR017689 Outer membrane protein assembly factor BamD DA442_02855 a43df60f994572fbe48595a9551e420b 242 SUPERFAMILY SSF48452 30 119 6.07E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_16995 79dd331215d7a61b345740e88ce8adf4 403 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 63 391 1.7E-107 T 14-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX DA442_07330 5c8a1a398f0b0c624f98143486a5dc32 199 Gene3D G3DSA:3.40.50.10610 23 197 3.2E-10 T 14-10-2018 DA442_07330 5c8a1a398f0b0c624f98143486a5dc32 199 SUPERFAMILY SSF159594 31 196 3.66E-22 T 14-10-2018 DA442_09835 7c66e671a6be204048d0926687543e83 273 Gene3D G3DSA:3.30.40.60 164 271 1.9E-6 T 14-10-2018 DA442_09835 7c66e671a6be204048d0926687543e83 273 SMART SM00507 188 246 3.4E-10 T 14-10-2018 IPR003615 HNH nuclease DA442_09835 7c66e671a6be204048d0926687543e83 273 Pfam PF01844 HNH endonuclease 201 250 1.2E-10 T 14-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 DA442_24350 7b892275f22fcb78c0035a4d7c353e1e 462 Pfam PF02321 Outer membrane efflux protein 66 248 9.0E-27 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DA442_24350 7b892275f22fcb78c0035a4d7c353e1e 462 Pfam PF02321 Outer membrane efflux protein 281 455 4.1E-19 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DA442_24350 7b892275f22fcb78c0035a4d7c353e1e 462 Gene3D G3DSA:1.20.1600.10 56 456 1.3E-105 T 14-10-2018 DA442_24350 7b892275f22fcb78c0035a4d7c353e1e 462 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 16 456 2.1E-82 T 14-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 DA442_24350 7b892275f22fcb78c0035a4d7c353e1e 462 Gene3D G3DSA:2.20.200.10 103 346 1.3E-105 T 14-10-2018 DA442_24350 7b892275f22fcb78c0035a4d7c353e1e 462 SUPERFAMILY SSF56954 3 457 5.49E-94 T 14-10-2018 DA442_06875 83d53139f0ce6ed3c968d6fac99a34e1 814 SUPERFAMILY SSF49299 609 691 7.46E-22 T 14-10-2018 IPR035986 PKD domain superfamily DA442_06875 83d53139f0ce6ed3c968d6fac99a34e1 814 Gene3D G3DSA:1.10.1740.190 347 488 1.8E-34 T 14-10-2018 DA442_06875 83d53139f0ce6ed3c968d6fac99a34e1 814 Gene3D G3DSA:1.10.390.20 489 609 1.5E-7 T 14-10-2018 DA442_06875 83d53139f0ce6ed3c968d6fac99a34e1 814 Gene3D G3DSA:2.60.40.10 610 691 7.2E-26 T 14-10-2018 IPR013783 Immunoglobulin-like fold DA442_06875 83d53139f0ce6ed3c968d6fac99a34e1 814 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 433 449 8.1E-35 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 DA442_06875 83d53139f0ce6ed3c968d6fac99a34e1 814 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 498 513 8.1E-35 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 DA442_06875 83d53139f0ce6ed3c968d6fac99a34e1 814 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 415 429 8.1E-35 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 DA442_06875 83d53139f0ce6ed3c968d6fac99a34e1 814 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 476 494 8.1E-35 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 DA442_06875 83d53139f0ce6ed3c968d6fac99a34e1 814 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 144 162 8.1E-35 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 DA442_06875 83d53139f0ce6ed3c968d6fac99a34e1 814 Pfam PF08453 Peptidase family M9 N-terminal 78 258 4.5E-56 T 14-10-2018 IPR013661 Peptidase M9, collagenase, N-terminal domain DA442_06875 83d53139f0ce6ed3c968d6fac99a34e1 814 Pfam PF01752 Collagenase 317 600 4.5E-108 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 DA442_06875 83d53139f0ce6ed3c968d6fac99a34e1 814 Pfam PF00801 PKD domain 622 682 9.7E-13 T 14-10-2018 IPR000601 PKD domain DA442_06875 83d53139f0ce6ed3c968d6fac99a34e1 814 SMART SM00089 611 693 5.3E-25 T 14-10-2018 IPR022409 PKD/Chitinase domain DA442_17785 a906f17424af1281e57ee717d78f3deb 579 SUPERFAMILY SSF75011 134 507 7.19E-14 T 14-10-2018 DA442_17785 a906f17424af1281e57ee717d78f3deb 579 Gene3D G3DSA:2.130.10.10 45 293 5.6E-9 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 DA442_15150 df9a2bc7d621f9afe0f7022d369a0ed6 187 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 3 185 23.495 T 14-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 DA442_15150 df9a2bc7d621f9afe0f7022d369a0ed6 187 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 9 183 1.4E-45 T 14-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related DA442_15150 df9a2bc7d621f9afe0f7022d369a0ed6 187 Gene3D G3DSA:2.60.450.10 59 186 8.4E-38 T 14-10-2018 DA442_15150 df9a2bc7d621f9afe0f7022d369a0ed6 187 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 5 182 2.1E-47 T 14-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 DA442_15150 df9a2bc7d621f9afe0f7022d369a0ed6 187 PIRSF PIRSF028513 2 185 3.1E-28 T 14-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 DA442_00695 d9b90fbf598c788cd778ae0ac17e9ffd 674 PRINTS PR01032 Gene IV protein signature 471 494 3.2E-13 T 14-10-2018 DA442_00695 d9b90fbf598c788cd778ae0ac17e9ffd 674 PRINTS PR01032 Gene IV protein signature 539 567 3.2E-13 T 14-10-2018 DA442_00695 d9b90fbf598c788cd778ae0ac17e9ffd 674 PRINTS PR01032 Gene IV protein signature 592 614 3.2E-13 T 14-10-2018 DA442_00695 d9b90fbf598c788cd778ae0ac17e9ffd 674 PRINTS PR00811 Bacterial general secretion pathway protein D signature 481 491 2.8E-37 T 14-10-2018 IPR001775 GspD/PilQ family DA442_00695 d9b90fbf598c788cd778ae0ac17e9ffd 674 PRINTS PR00811 Bacterial general secretion pathway protein D signature 576 594 2.8E-37 T 14-10-2018 IPR001775 GspD/PilQ family DA442_00695 d9b90fbf598c788cd778ae0ac17e9ffd 674 PRINTS PR00811 Bacterial general secretion pathway protein D signature 446 470 2.8E-37 T 14-10-2018 IPR001775 GspD/PilQ family DA442_00695 d9b90fbf598c788cd778ae0ac17e9ffd 674 PRINTS PR00811 Bacterial general secretion pathway protein D signature 344 354 2.8E-37 T 14-10-2018 IPR001775 GspD/PilQ family DA442_00695 d9b90fbf598c788cd778ae0ac17e9ffd 674 PRINTS PR00811 Bacterial general secretion pathway protein D signature 599 613 2.8E-37 T 14-10-2018 IPR001775 GspD/PilQ family DA442_00695 d9b90fbf598c788cd778ae0ac17e9ffd 674 Pfam PF00263 Bacterial type II and III secretion system protein 450 612 5.3E-51 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 DA442_00695 d9b90fbf598c788cd778ae0ac17e9ffd 674 Gene3D G3DSA:3.30.1370.120 21 185 1.7E-52 T 14-10-2018 IPR038591 NolW-like superfamily DA442_00695 d9b90fbf598c788cd778ae0ac17e9ffd 674 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 30 621 6.5E-159 T 14-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 DA442_00695 d9b90fbf598c788cd778ae0ac17e9ffd 674 Gene3D G3DSA:3.30.1370.120 263 342 1.8E-17 T 14-10-2018 IPR038591 NolW-like superfamily DA442_00695 d9b90fbf598c788cd778ae0ac17e9ffd 674 Pfam PF03958 Bacterial type II/III secretion system short domain 266 344 1.9E-18 T 14-10-2018 IPR005644 NolW-like DA442_00695 d9b90fbf598c788cd778ae0ac17e9ffd 674 Pfam PF03958 Bacterial type II/III secretion system short domain 191 258 7.4E-16 T 14-10-2018 IPR005644 NolW-like DA442_00695 d9b90fbf598c788cd778ae0ac17e9ffd 674 Pfam PF03958 Bacterial type II/III secretion system short domain 125 186 7.5E-9 T 14-10-2018 IPR005644 NolW-like DA442_00695 d9b90fbf598c788cd778ae0ac17e9ffd 674 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 557 590 - T 14-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 DA442_00695 d9b90fbf598c788cd778ae0ac17e9ffd 674 Gene3D G3DSA:3.30.1370.120 188 258 1.6E-20 T 14-10-2018 IPR038591 NolW-like superfamily DA442_12315 0fc3836204db696ab9fa613f1fe84f5c 205 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 203 1.9E-77 T 14-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 DA442_12315 0fc3836204db696ab9fa613f1fe84f5c 205 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_12315 0fc3836204db696ab9fa613f1fe84f5c 205 Gene3D G3DSA:3.40.50.300 1 201 5.5E-42 T 14-10-2018 DA442_12315 0fc3836204db696ab9fa613f1fe84f5c 205 Pfam PF00005 ABC transporter 18 158 6.0E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_12315 0fc3836204db696ab9fa613f1fe84f5c 205 SMART SM00382 26 205 9.8E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_12315 0fc3836204db696ab9fa613f1fe84f5c 205 SUPERFAMILY SSF52540 2 193 4.75E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_11520 5882315ef4a9debd925eff32abe7b35d 341 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 340 137.986 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 DA442_11520 5882315ef4a9debd925eff32abe7b35d 341 Gene3D G3DSA:3.40.718.10 2 340 3.8E-121 T 14-10-2018 DA442_11520 5882315ef4a9debd925eff32abe7b35d 341 PIRSF PIRSF002465 2 339 1.5E-124 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 DA442_11520 5882315ef4a9debd925eff32abe7b35d 341 Pfam PF02504 Fatty acid synthesis protein 5 327 1.2E-101 T 14-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 DA442_11520 5882315ef4a9debd925eff32abe7b35d 341 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 335 7.9E-107 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 DA442_11520 5882315ef4a9debd925eff32abe7b35d 341 SUPERFAMILY SSF53659 4 336 1.07E-102 T 14-10-2018 DA442_25565 83dda509e66d9372829d090e47657a20 283 Gene3D G3DSA:3.40.710.10 20 281 2.3E-68 T 14-10-2018 DA442_25565 83dda509e66d9372829d090e47657a20 283 PRINTS PR00118 Beta-lactamase class A signature 196 211 3.6E-58 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 DA442_25565 83dda509e66d9372829d090e47657a20 283 PRINTS PR00118 Beta-lactamase class A signature 25 49 3.6E-58 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 DA442_25565 83dda509e66d9372829d090e47657a20 283 PRINTS PR00118 Beta-lactamase class A signature 56 73 3.6E-58 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 DA442_25565 83dda509e66d9372829d090e47657a20 283 PRINTS PR00118 Beta-lactamase class A signature 134 158 3.6E-58 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 DA442_25565 83dda509e66d9372829d090e47657a20 283 PRINTS PR00118 Beta-lactamase class A signature 213 228 3.6E-58 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 DA442_25565 83dda509e66d9372829d090e47657a20 283 PRINTS PR00118 Beta-lactamase class A signature 160 185 3.6E-58 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 DA442_25565 83dda509e66d9372829d090e47657a20 283 PRINTS PR00118 Beta-lactamase class A signature 98 123 3.6E-58 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 DA442_25565 83dda509e66d9372829d090e47657a20 283 Pfam PF13354 Beta-lactamase enzyme family 45 252 2.7E-36 T 14-10-2018 DA442_25565 83dda509e66d9372829d090e47657a20 283 ProSitePatterns PS00146 Beta-lactamase class-A active site. 58 73 - T 14-10-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 DA442_25565 83dda509e66d9372829d090e47657a20 283 SUPERFAMILY SSF56601 20 280 3.35E-74 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DA442_22370 b917fb527063aaed072aab00df4b8d21 217 Gene3D G3DSA:3.40.109.10 1 217 2.2E-62 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DA442_22370 b917fb527063aaed072aab00df4b8d21 217 SUPERFAMILY SSF55469 1 216 3.27E-66 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DA442_22370 b917fb527063aaed072aab00df4b8d21 217 Pfam PF00881 Nitroreductase family 8 193 7.6E-27 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 DA442_09040 00efbd943126274cecf995d7ec4a6bc1 264 SUPERFAMILY SSF51735 1 260 8.38E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_09040 00efbd943126274cecf995d7ec4a6bc1 264 Pfam PF00106 short chain dehydrogenase 7 193 3.4E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_09040 00efbd943126274cecf995d7ec4a6bc1 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.0E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_09040 00efbd943126274cecf995d7ec4a6bc1 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 2.0E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_09040 00efbd943126274cecf995d7ec4a6bc1 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 2.0E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_09040 00efbd943126274cecf995d7ec4a6bc1 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 2.0E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_09040 00efbd943126274cecf995d7ec4a6bc1 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.0E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_09040 00efbd943126274cecf995d7ec4a6bc1 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 5.4E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_09040 00efbd943126274cecf995d7ec4a6bc1 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 5.4E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_09040 00efbd943126274cecf995d7ec4a6bc1 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 5.4E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_09040 00efbd943126274cecf995d7ec4a6bc1 264 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 183 3.5E-5 T 14-10-2018 DA442_09040 00efbd943126274cecf995d7ec4a6bc1 264 Gene3D G3DSA:3.40.50.720 1 261 2.9E-57 T 14-10-2018 DA442_24380 b0e2b2a42e138c597138f3ca35a4fd1e 147 SUPERFAMILY SSF55804 1 146 2.22E-42 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DA442_24380 b0e2b2a42e138c597138f3ca35a4fd1e 147 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain DA442_24380 b0e2b2a42e138c597138f3ca35a4fd1e 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 146 1.7E-37 T 14-10-2018 IPR002178 PTS EIIA type-2 domain DA442_24380 b0e2b2a42e138c597138f3ca35a4fd1e 147 Gene3D G3DSA:3.40.930.10 1 147 6.4E-58 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DA442_06575 8b4ab027368fa78b8b2a5d859c90803e 64 Gene3D G3DSA:2.40.50.530 1 64 1.6E-18 T 14-10-2018 DA442_06575 8b4ab027368fa78b8b2a5d859c90803e 64 Pfam PF01632 Ribosomal protein L35 2 61 4.1E-21 T 14-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_06575 8b4ab027368fa78b8b2a5d859c90803e 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 14-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_06575 8b4ab027368fa78b8b2a5d859c90803e 64 SUPERFAMILY SSF143034 2 63 1.96E-20 T 14-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_06575 8b4ab027368fa78b8b2a5d859c90803e 64 PRINTS PR00064 Ribosomal protein L35 signature 35 53 6.2E-19 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DA442_06575 8b4ab027368fa78b8b2a5d859c90803e 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 6.2E-19 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DA442_06575 8b4ab027368fa78b8b2a5d859c90803e 64 PRINTS PR00064 Ribosomal protein L35 signature 20 34 6.2E-19 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DA442_06575 8b4ab027368fa78b8b2a5d859c90803e 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 17.907 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DA442_06575 8b4ab027368fa78b8b2a5d859c90803e 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 3.9E-27 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DA442_13185 48b5d6d03af6f5d90dd8346d301e692c 315 SUPERFAMILY SSF143865 4 236 2.75E-25 T 14-10-2018 DA442_13185 48b5d6d03af6f5d90dd8346d301e692c 315 Gene3D G3DSA:1.20.58.340 125 249 8.3E-29 T 14-10-2018 DA442_13185 48b5d6d03af6f5d90dd8346d301e692c 315 SUPERFAMILY SSF144083 245 306 6.54E-14 T 14-10-2018 DA442_13185 48b5d6d03af6f5d90dd8346d301e692c 315 Gene3D G3DSA:3.30.460.20 1 124 1.7E-46 T 14-10-2018 DA442_13185 48b5d6d03af6f5d90dd8346d301e692c 315 Gene3D G3DSA:1.20.58.340 252 308 9.3E-10 T 14-10-2018 DA442_13185 48b5d6d03af6f5d90dd8346d301e692c 315 Pfam PF01544 CorA-like Mg2+ transporter protein 29 305 1.9E-46 T 14-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 DA442_18750 1967d1aa5edddbcb352c2f1a4558198e 142 SUPERFAMILY SSF54637 13 137 2.05E-23 T 14-10-2018 IPR029069 HotDog domain superfamily DA442_18750 1967d1aa5edddbcb352c2f1a4558198e 142 Pfam PF03061 Thioesterase superfamily 59 109 4.0E-7 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 DA442_18750 1967d1aa5edddbcb352c2f1a4558198e 142 Gene3D G3DSA:3.10.129.10 4 142 3.3E-25 T 14-10-2018 DA442_18900 dbe001920d8c66d963400c5f7fd3c547 372 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 268 362 1.1E-21 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 DA442_18900 dbe001920d8c66d963400c5f7fd3c547 372 Pfam PF01571 Aminomethyltransferase folate-binding domain 10 254 4.0E-87 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain DA442_18900 dbe001920d8c66d963400c5f7fd3c547 372 Gene3D G3DSA:2.40.30.110 284 361 7.5E-28 T 14-10-2018 DA442_18900 dbe001920d8c66d963400c5f7fd3c547 372 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 6 366 5.3E-107 T 14-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 DA442_18900 dbe001920d8c66d963400c5f7fd3c547 372 Gene3D G3DSA:4.10.1250.10 233 281 1.3E-20 T 14-10-2018 DA442_18900 dbe001920d8c66d963400c5f7fd3c547 372 PIRSF PIRSF006487 1 372 5.0E-79 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 DA442_18900 dbe001920d8c66d963400c5f7fd3c547 372 Gene3D G3DSA:3.30.1360.120 7 231 4.1E-84 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 DA442_18900 dbe001920d8c66d963400c5f7fd3c547 372 SUPERFAMILY SSF103025 4 281 3.45E-89 T 14-10-2018 DA442_18900 dbe001920d8c66d963400c5f7fd3c547 372 SUPERFAMILY SSF101790 279 371 1.96E-25 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal DA442_18900 dbe001920d8c66d963400c5f7fd3c547 372 Gene3D G3DSA:3.30.70.1400 56 139 4.1E-84 T 14-10-2018 DA442_20545 4187550f0ccbb54d67e567697133dc0f 454 PIRSF PIRSF006446 2 453 6.1E-215 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 DA442_20545 4187550f0ccbb54d67e567697133dc0f 454 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 437 4.0E-163 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 DA442_16075 addc4f421586b9d413ebbb73e1080d9c 471 Pfam PF00939 Sodium:sulfate symporter transmembrane region 10 465 3.8E-49 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 DA442_16075 addc4f421586b9d413ebbb73e1080d9c 471 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 36 467 8.5E-82 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 DA442_00910 5ed789b35073df1d32ce68f66ff29ebe 143 Pfam PF06146 Phosphate-starvation-inducible E 53 119 2.7E-13 T 14-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like DA442_00910 5ed789b35073df1d32ce68f66ff29ebe 143 PIRSF PIRSF029598 5 137 6.4E-40 T 14-10-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 DA442_10655 c900ee3c060b17825b73b4548f0fd598 453 Pfam PF03313 Serine dehydratase alpha chain 184 448 9.6E-98 T 14-10-2018 IPR005130 Serine dehydratase-like, alpha subunit DA442_10655 c900ee3c060b17825b73b4548f0fd598 453 Pfam PF03315 Serine dehydratase beta chain 3 155 2.4E-54 T 14-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 DA442_10655 c900ee3c060b17825b73b4548f0fd598 453 Gene3D G3DSA:3.30.1330.90 10 159 1.8E-49 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 DA442_10655 c900ee3c060b17825b73b4548f0fd598 453 SUPERFAMILY SSF143548 16 157 2.09E-44 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 DA442_10655 c900ee3c060b17825b73b4548f0fd598 453 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 1.6E-227 T 14-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 DA442_04635 db7b0510b6c4dd8ea51adbe9b1a8f8b0 780 SUPERFAMILY SSF82866 209 408 6.28E-21 T 14-10-2018 DA442_04635 db7b0510b6c4dd8ea51adbe9b1a8f8b0 780 SUPERFAMILY SSF82866 604 771 1.02E-19 T 14-10-2018 DA442_04635 db7b0510b6c4dd8ea51adbe9b1a8f8b0 780 Pfam PF03176 MMPL family 72 414 5.6E-12 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 DA442_00170 817eee763493e3e3c62538a310ce5e5c 83 Pfam PF04380 Membrane fusogenic activity 1 78 1.3E-27 T 14-10-2018 IPR007475 Membrane fusogenic activity DA442_19280 d78240c194c623169c9efcc971e228c3 251 SUPERFAMILY SSF88713 7 249 1.7E-91 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DA442_19280 d78240c194c623169c9efcc971e228c3 251 Gene3D G3DSA:3.20.20.370 6 251 5.0E-98 T 14-10-2018 DA442_19280 d78240c194c623169c9efcc971e228c3 251 Pfam PF03746 LamB/YcsF family 9 246 1.8E-94 T 14-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 DA442_19280 d78240c194c623169c9efcc971e228c3 251 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 6 251 43.666 T 14-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 DA442_07345 2c9434dc83922ce29b0d1bbfadde8377 450 Pfam PF04632 Fusaric acid resistance protein family 9 160 1.7E-29 T 14-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 DA442_03380 b35feb20bb6f7192823f933984cdebb8 208 PIRSF PIRSF004525 1 100 1.3E-10 T 14-10-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted DA442_03380 b35feb20bb6f7192823f933984cdebb8 208 PIRSF PIRSF004525 109 208 7.9 T 14-10-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted DA442_12260 be14f093da09d200f6fe0d37c8bc930b 419 SUPERFAMILY SSF56935 27 419 2.98E-87 T 14-10-2018 DA442_12260 be14f093da09d200f6fe0d37c8bc930b 419 Gene3D G3DSA:2.40.160.60 27 419 1.5E-109 T 14-10-2018 DA442_12260 be14f093da09d200f6fe0d37c8bc930b 419 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 18 419 2.4E-112 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) DA442_04665 31d0e905703f6596be4e1d92653c7e5f 456 Pfam PF00501 AMP-binding enzyme 9 307 2.1E-17 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DA442_04665 31d0e905703f6596be4e1d92653c7e5f 456 Pfam PF13193 AMP-binding enzyme C-terminal domain 362 445 2.1E-7 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain DA442_04665 31d0e905703f6596be4e1d92653c7e5f 456 Gene3D G3DSA:3.40.50.12780 3 319 9.5E-23 T 14-10-2018 DA442_04665 31d0e905703f6596be4e1d92653c7e5f 456 SUPERFAMILY SSF56801 8 455 2.49E-54 T 14-10-2018 DA442_04665 31d0e905703f6596be4e1d92653c7e5f 456 Gene3D G3DSA:3.30.300.30 347 453 1.7E-16 T 14-10-2018 DA442_06400 42b15b837d376bafbb667c354d420891 367 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 11 366 1.0E-162 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 DA442_06400 42b15b837d376bafbb667c354d420891 367 Gene3D G3DSA:3.90.1150.10 265 367 7.7E-41 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DA442_06400 42b15b837d376bafbb667c354d420891 367 Pfam PF00266 Aminotransferase class-V 11 355 7.0E-63 T 14-10-2018 IPR000192 Aminotransferase class V domain DA442_06400 42b15b837d376bafbb667c354d420891 367 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 9 366 52.315 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 DA442_06400 42b15b837d376bafbb667c354d420891 367 PIRSF PIRSF000525 5 367 3.6E-154 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 DA442_06400 42b15b837d376bafbb667c354d420891 367 SUPERFAMILY SSF53383 10 364 4.87E-116 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_06400 42b15b837d376bafbb667c354d420891 367 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 194 213 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site DA442_06400 42b15b837d376bafbb667c354d420891 367 Gene3D G3DSA:3.40.640.10 24 264 2.5E-92 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_14970 9c6c42abbb6b16d06b15aa23c1fde68c 440 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 411 3.2E-51 T 14-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 DA442_14970 9c6c42abbb6b16d06b15aa23c1fde68c 440 SUPERFAMILY SSF56327 173 436 7.31E-95 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DA442_14970 9c6c42abbb6b16d06b15aa23c1fde68c 440 SUPERFAMILY SSF51735 6 170 5.44E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_14970 9c6c42abbb6b16d06b15aa23c1fde68c 440 Pfam PF02056 Family 4 glycosyl hydrolase 7 186 1.7E-61 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DA442_14970 9c6c42abbb6b16d06b15aa23c1fde68c 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 99 112 1.1E-47 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DA442_14970 9c6c42abbb6b16d06b15aa23c1fde68c 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 78 94 1.1E-47 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DA442_14970 9c6c42abbb6b16d06b15aa23c1fde68c 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 1.1E-47 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DA442_14970 9c6c42abbb6b16d06b15aa23c1fde68c 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 113 133 1.1E-47 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DA442_14970 9c6c42abbb6b16d06b15aa23c1fde68c 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 142 159 1.1E-47 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DA442_14970 9c6c42abbb6b16d06b15aa23c1fde68c 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 1.1E-47 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DA442_14970 9c6c42abbb6b16d06b15aa23c1fde68c 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 7 22 1.1E-47 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DA442_14970 9c6c42abbb6b16d06b15aa23c1fde68c 440 Gene3D G3DSA:3.40.50.720 1 170 7.0E-67 T 14-10-2018 DA442_14970 9c6c42abbb6b16d06b15aa23c1fde68c 440 Gene3D G3DSA:3.90.110.10 171 439 1.1E-100 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DA442_25575 c831090f8a9f1f03efb97a2376cbfc04 193 SUPERFAMILY SSF49503 82 192 2.58E-22 T 14-10-2018 IPR008972 Cupredoxin DA442_25575 c831090f8a9f1f03efb97a2376cbfc04 193 Gene3D G3DSA:2.60.40.420 70 193 7.4E-19 T 14-10-2018 IPR008972 Cupredoxin DA442_17050 9245cddee95a53b890e04f8a8cdad84e 237 Gene3D G3DSA:3.40.50.80 103 237 1.5E-30 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DA442_17050 9245cddee95a53b890e04f8a8cdad84e 237 Gene3D G3DSA:2.40.30.10 1 102 1.9E-22 T 14-10-2018 DA442_17050 9245cddee95a53b890e04f8a8cdad84e 237 Pfam PF00175 Oxidoreductase NAD-binding domain 112 215 2.8E-23 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 DA442_17050 9245cddee95a53b890e04f8a8cdad84e 237 Pfam PF00970 Oxidoreductase FAD-binding domain 22 99 7.9E-5 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 DA442_17050 9245cddee95a53b890e04f8a8cdad84e 237 SUPERFAMILY SSF63380 2 101 5.18E-17 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DA442_17050 9245cddee95a53b890e04f8a8cdad84e 237 SUPERFAMILY SSF52343 104 235 5.24E-35 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DA442_17050 9245cddee95a53b890e04f8a8cdad84e 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 46 53 7.5E-14 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DA442_17050 9245cddee95a53b890e04f8a8cdad84e 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 95 104 7.5E-14 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DA442_17050 9245cddee95a53b890e04f8a8cdad84e 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 30 42 7.5E-14 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DA442_17050 9245cddee95a53b890e04f8a8cdad84e 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 111 130 7.5E-14 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DA442_17050 9245cddee95a53b890e04f8a8cdad84e 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 136 145 7.5E-14 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 DA442_08585 feeca84f068b80514eb2fc930f1862d2 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 235 4.3E-26 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 DA442_08585 feeca84f068b80514eb2fc930f1862d2 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 262 4.8E-66 T 14-10-2018 DA442_08585 feeca84f068b80514eb2fc930f1862d2 269 Gene3D G3DSA:3.40.50.1000 3 263 4.7E-81 T 14-10-2018 IPR023214 HAD superfamily DA442_08585 feeca84f068b80514eb2fc930f1862d2 269 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 14-10-2018 DA442_08585 feeca84f068b80514eb2fc930f1862d2 269 Gene3D G3DSA:3.30.1240.10 86 191 4.7E-81 T 14-10-2018 DA442_08585 feeca84f068b80514eb2fc930f1862d2 269 ProSitePatterns PS01229 Hypothetical cof family signature 2. 216 238 - T 14-10-2018 DA442_08585 feeca84f068b80514eb2fc930f1862d2 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 262 5.4E-61 T 14-10-2018 IPR000150 Cof family GO:0016787 DA442_08585 feeca84f068b80514eb2fc930f1862d2 269 SUPERFAMILY SSF56784 1 267 9.61E-75 T 14-10-2018 IPR036412 HAD-like superfamily DA442_00675 b3035c1dd8d90a33ff051778a2360f95 542 Pfam PF01293 Phosphoenolpyruvate carboxykinase 24 491 2.8E-211 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 DA442_00675 b3035c1dd8d90a33ff051778a2360f95 542 SUPERFAMILY SSF68923 11 228 2.62E-88 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 DA442_00675 b3035c1dd8d90a33ff051778a2360f95 542 Gene3D G3DSA:3.40.449.10 25 235 4.6E-237 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 DA442_00675 b3035c1dd8d90a33ff051778a2360f95 542 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 11 541 1.1E-278 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 DA442_00675 b3035c1dd8d90a33ff051778a2360f95 542 Gene3D G3DSA:2.170.8.10 49 351 4.6E-237 T 14-10-2018 DA442_00675 b3035c1dd8d90a33ff051778a2360f95 542 PIRSF PIRSF006294 4 541 1.9E-227 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 DA442_00675 b3035c1dd8d90a33ff051778a2360f95 542 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 266 281 - T 14-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 DA442_00675 b3035c1dd8d90a33ff051778a2360f95 542 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 18 539 55.124 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 DA442_00675 b3035c1dd8d90a33ff051778a2360f95 542 SUPERFAMILY SSF53795 230 541 1.96E-128 T 14-10-2018 DA442_00675 b3035c1dd8d90a33ff051778a2360f95 542 Gene3D G3DSA:3.90.228.20 236 526 4.6E-237 T 14-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 DA442_23530 28459bf95124726341ec9f07d6f05acf 153 SUPERFAMILY SSF56524 29 148 6.47E-11 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 DA442_13115 22c8831efefcfd7511c89350f7dc2abe 1163 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1122 0.0 T 14-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 DA442_13115 22c8831efefcfd7511c89350f7dc2abe 1163 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1154 20.94 T 14-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 DA442_13115 22c8831efefcfd7511c89350f7dc2abe 1163 Gene3D G3DSA:1.10.486.10 457 669 4.3E-193 T 14-10-2018 DA442_13115 22c8831efefcfd7511c89350f7dc2abe 1163 PIRSF PIRSF000980 1 1161 0.0 T 14-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 DA442_13115 22c8831efefcfd7511c89350f7dc2abe 1163 SUPERFAMILY SSF52980 838 1145 6.43E-76 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DA442_13115 22c8831efefcfd7511c89350f7dc2abe 1163 SUPERFAMILY SSF52540 2 351 7.96E-126 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_13115 22c8831efefcfd7511c89350f7dc2abe 1163 Gene3D G3DSA:3.40.50.10930 4 321 8.9E-128 T 14-10-2018 DA442_13115 22c8831efefcfd7511c89350f7dc2abe 1163 Gene3D G3DSA:3.40.50.300 339 811 4.3E-193 T 14-10-2018 DA442_13115 22c8831efefcfd7511c89350f7dc2abe 1163 SUPERFAMILY SSF52540 365 815 1.27E-102 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_13115 22c8831efefcfd7511c89350f7dc2abe 1163 Gene3D G3DSA:1.10.10.990 878 956 4.2E-22 T 14-10-2018 DA442_13115 22c8831efefcfd7511c89350f7dc2abe 1163 Gene3D G3DSA:1.10.10.160 79 187 8.9E-128 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily DA442_13115 22c8831efefcfd7511c89350f7dc2abe 1163 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 2 810 0.0 T 14-10-2018 DA442_21790 0d0c3fda01f5e530775ed4f55ae07432 308 SMART SM00257 47 91 6.3E-6 T 14-10-2018 IPR018392 LysM domain DA442_21790 0d0c3fda01f5e530775ed4f55ae07432 308 SUPERFAMILY SSF54106 47 91 3.14E-7 T 14-10-2018 DA442_21790 0d0c3fda01f5e530775ed4f55ae07432 308 SUPERFAMILY SSF141523 100 238 2.09E-30 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like DA442_21790 0d0c3fda01f5e530775ed4f55ae07432 308 Gene3D G3DSA:2.40.440.10 27 306 8.3E-85 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like DA442_21790 0d0c3fda01f5e530775ed4f55ae07432 308 Pfam PF03734 L,D-transpeptidase catalytic domain 104 238 6.7E-22 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 DA442_21790 0d0c3fda01f5e530775ed4f55ae07432 308 Pfam PF01476 LysM domain 48 91 4.1E-9 T 14-10-2018 IPR018392 LysM domain DA442_02510 4cefa865e6c099572c70b8abc4900b99 238 SUPERFAMILY SSF52172 2 130 2.99E-36 T 14-10-2018 IPR011006 CheY-like superfamily DA442_02510 4cefa865e6c099572c70b8abc4900b99 238 Pfam PF00072 Response regulator receiver domain 6 113 3.4E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_02510 4cefa865e6c099572c70b8abc4900b99 238 SMART SM00862 156 232 2.4E-14 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DA442_02510 4cefa865e6c099572c70b8abc4900b99 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.8E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DA442_02510 4cefa865e6c099572c70b8abc4900b99 238 Gene3D G3DSA:1.10.10.10 123 236 5.0E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_02510 4cefa865e6c099572c70b8abc4900b99 238 SMART SM00448 4 114 2.7E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_02510 4cefa865e6c099572c70b8abc4900b99 238 SUPERFAMILY SSF46894 137 233 9.92E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DA442_02510 4cefa865e6c099572c70b8abc4900b99 238 Gene3D G3DSA:3.40.50.2300 2 122 3.5E-33 T 14-10-2018 DA442_16795 961638fee02b3016af48334c87e46ba4 106 SMART SM00450 7 102 9.6E-19 T 14-10-2018 IPR001763 Rhodanese-like domain DA442_16795 961638fee02b3016af48334c87e46ba4 106 Gene3D G3DSA:3.40.250.10 1 101 6.9E-26 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily DA442_16795 961638fee02b3016af48334c87e46ba4 106 Pfam PF00581 Rhodanese-like domain 13 98 7.7E-12 T 14-10-2018 IPR001763 Rhodanese-like domain DA442_16795 961638fee02b3016af48334c87e46ba4 106 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 105 31.832 T 14-10-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927 DA442_16795 961638fee02b3016af48334c87e46ba4 106 SUPERFAMILY SSF52821 1 105 2.36E-29 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily DA442_07620 cbb8de9447d6b803c43f3e654d4cc55c 166 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 12 149 8.1E-34 T 14-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN DA442_07620 cbb8de9447d6b803c43f3e654d4cc55c 166 Gene3D G3DSA:2.60.40.4150 28 164 2.2E-31 T 14-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily DA442_07620 cbb8de9447d6b803c43f3e654d4cc55c 166 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 2 152 3.8E-42 T 14-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN DA442_22645 666277e52f5523fc63d6b4f19ac24366 219 SMART SM00857 8 139 5.0E-8 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 DA442_22645 666277e52f5523fc63d6b4f19ac24366 219 Gene3D G3DSA:3.40.50.1390 6 126 1.9E-14 T 14-10-2018 DA442_22645 666277e52f5523fc63d6b4f19ac24366 219 SUPERFAMILY SSF53041 6 141 1.2E-17 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 DA442_22645 666277e52f5523fc63d6b4f19ac24366 219 Pfam PF00239 Resolvase, N terminal domain 9 141 1.6E-14 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 DA442_05070 476e23932954f05f43da436b97f935fd 196 Pfam PF13036 Peptidoglycan-synthase activator LpoB 41 185 4.5E-55 T 14-10-2018 IPR014094 Penicillin-binding protein activator LpoB DA442_05070 476e23932954f05f43da436b97f935fd 196 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 3 187 3.5E-74 T 14-10-2018 IPR014094 Penicillin-binding protein activator LpoB DA442_05070 476e23932954f05f43da436b97f935fd 196 Gene3D G3DSA:3.40.50.10610 38 188 2.6E-43 T 14-10-2018 DA442_17950 c7dfbe7815a61a4cded81fd0ac9f5ee2 300 Pfam PF00682 HMGL-like 7 276 1.8E-51 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 DA442_17950 c7dfbe7815a61a4cded81fd0ac9f5ee2 300 Gene3D G3DSA:3.20.20.70 1 299 3.4E-129 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_17950 c7dfbe7815a61a4cded81fd0ac9f5ee2 300 SUPERFAMILY SSF51569 1 297 1.42E-71 T 14-10-2018 DA442_17950 c7dfbe7815a61a4cded81fd0ac9f5ee2 300 ProSitePatterns PS01062 Hydroxymethylglutaryl-coenzyme A lyase active site. 232 241 - T 14-10-2018 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site GO:0004419 KEGG: 00072+4.1.3.4|KEGG: 00280+4.1.3.4|KEGG: 00281+4.1.3.4|KEGG: 00650+4.1.3.4|MetaCyc: PWY-5074|Reactome: R-HSA-77111|Reactome: R-HSA-9033241 DA442_20050 b118e3661646fcd75e3bae291fd803cb 441 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 6 441 1.5E-143 T 14-10-2018 IPR010263 Type VI secretion protein, VC_A0114 DA442_20050 b118e3661646fcd75e3bae291fd803cb 441 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 439 8.8E-123 T 14-10-2018 IPR010263 Type VI secretion protein, VC_A0114 DA442_09095 7d87d7c16f60f248fe9452b8e6a4d0ab 211 Pfam PF01810 LysE type translocator 15 208 5.1E-33 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DA442_09095 7d87d7c16f60f248fe9452b8e6a4d0ab 211 PIRSF PIRSF006324 1 209 2.4E-56 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DA442_23735 509a0da552193473d37b45dd2d6d5cb9 178 Pfam PF06041 Bacterial protein of unknown function (DUF924) 5 175 4.7E-63 T 14-10-2018 IPR010323 Protein of unknown function DUF924 DA442_23735 509a0da552193473d37b45dd2d6d5cb9 178 Gene3D G3DSA:1.20.58.320 1 77 2.1E-26 T 14-10-2018 DA442_23735 509a0da552193473d37b45dd2d6d5cb9 178 SUPERFAMILY SSF48452 2 174 4.93E-67 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_23735 509a0da552193473d37b45dd2d6d5cb9 178 Gene3D G3DSA:1.25.40.10 78 178 2.2E-33 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_24910 f4936b34318c70978311798db625eca0 298 Gene3D G3DSA:1.25.40.10 112 294 3.9E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_24910 f4936b34318c70978311798db625eca0 298 SMART SM00028 201 234 13.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_24910 f4936b34318c70978311798db625eca0 298 SMART SM00028 235 268 0.0055 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_24910 f4936b34318c70978311798db625eca0 298 SUPERFAMILY SSF48452 187 297 6.45E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_17430 629f83048d8fae13f24ef83182c5e9d3 300 Gene3D G3DSA:3.40.190.290 93 276 2.9E-12 T 14-10-2018 DA442_17430 629f83048d8fae13f24ef83182c5e9d3 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 8.0E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_17430 629f83048d8fae13f24ef83182c5e9d3 300 SUPERFAMILY SSF53850 90 291 9.77E-24 T 14-10-2018 DA442_17430 629f83048d8fae13f24ef83182c5e9d3 300 SUPERFAMILY SSF46785 6 87 3.21E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_17430 629f83048d8fae13f24ef83182c5e9d3 300 Pfam PF03466 LysR substrate binding domain 90 287 3.6E-19 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_17430 629f83048d8fae13f24ef83182c5e9d3 300 Gene3D G3DSA:1.10.10.10 1 89 3.7E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_06695 0003cdbdac78b37757b2218ffaf1d16d 265 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 265 47.487 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 DA442_06695 0003cdbdac78b37757b2218ffaf1d16d 265 Pfam PF02654 Cobalamin-5-phosphate synthase 23 256 1.4E-53 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 DA442_06695 0003cdbdac78b37757b2218ffaf1d16d 265 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 22 258 1.0E-36 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 DA442_05865 3e52f3d94dbf64147580c214e467b893 204 Gene3D G3DSA:3.40.50.880 2 204 1.6E-72 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DA442_05865 3e52f3d94dbf64147580c214e467b893 204 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 5 204 33.509 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 DA442_05865 3e52f3d94dbf64147580c214e467b893 204 Pfam PF00117 Glutamine amidotransferase class-I 8 202 7.2E-17 T 14-10-2018 IPR017926 Glutamine amidotransferase DA442_05865 3e52f3d94dbf64147580c214e467b893 204 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 6 203 2.3E-68 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 DA442_05865 3e52f3d94dbf64147580c214e467b893 204 SUPERFAMILY SSF52317 5 203 2.55E-52 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DA442_05865 3e52f3d94dbf64147580c214e467b893 204 PIRSF PIRSF000495 4 204 1.0E-64 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 DA442_25255 f549f3b28b8ca8a6846f36479fb3a985 305 Pfam PF00246 Zinc carboxypeptidase 74 146 1.1E-6 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 DA442_25255 f549f3b28b8ca8a6846f36479fb3a985 305 SUPERFAMILY SSF53187 36 289 7.28E-39 T 14-10-2018 DA442_25255 f549f3b28b8ca8a6846f36479fb3a985 305 Gene3D G3DSA:3.40.630.10 4 305 5.2E-117 T 14-10-2018 DA442_21025 9978b4bc89b87a9c8e12300325cbe324 104 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 1 95 23.99 T 14-10-2018 IPR007458 Protein of unknown function DUF496 DA442_21025 9978b4bc89b87a9c8e12300325cbe324 104 PIRSF PIRSF028773 1 104 8.7E-46 T 14-10-2018 IPR007458 Protein of unknown function DUF496 DA442_21025 9978b4bc89b87a9c8e12300325cbe324 104 Pfam PF04363 Protein of unknown function (DUF496) 1 92 4.7E-42 T 14-10-2018 IPR007458 Protein of unknown function DUF496 DA442_21025 9978b4bc89b87a9c8e12300325cbe324 104 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 1 92 4.0E-45 T 14-10-2018 IPR007458 Protein of unknown function DUF496 DA442_06035 bf82ebe880dc48eb9bfd26264f97cf75 139 Pfam PF04024 PspC domain 14 72 1.2E-15 T 14-10-2018 IPR007168 Phage shock protein, PspC, N-terminal DA442_06035 bf82ebe880dc48eb9bfd26264f97cf75 139 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 13 139 1.2E-47 T 14-10-2018 IPR014320 Phage shock protein, PspC DA442_11535 e5f2995eba8eb4cbafa0b0292d6a913a 193 Gene3D G3DSA:3.90.950.10 5 193 4.5E-57 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DA442_11535 e5f2995eba8eb4cbafa0b0292d6a913a 193 TIGRFAM TIGR00172 maf: septum formation protein Maf 4 186 3.3E-51 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 DA442_11535 e5f2995eba8eb4cbafa0b0292d6a913a 193 PIRSF PIRSF006305 1 193 2.7E-44 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 DA442_11535 e5f2995eba8eb4cbafa0b0292d6a913a 193 Hamap MF_00528 Septum formation protein Maf [maf]. 5 192 29.67 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 DA442_11535 e5f2995eba8eb4cbafa0b0292d6a913a 193 Pfam PF02545 Maf-like protein 5 187 1.9E-44 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 DA442_11535 e5f2995eba8eb4cbafa0b0292d6a913a 193 SUPERFAMILY SSF52972 1 187 3.6E-59 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DA442_24440 edf8dfcdd29b25295ec9faf9fe7311cf 304 Pfam PF04393 Protein of unknown function (DUF535) 29 300 8.9E-83 T 14-10-2018 IPR007488 Protein of unknown function DUF535 DA442_05740 bdc62fa6c142b051445e0fb84d6414ad 235 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 9 219 29.933 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 DA442_05740 bdc62fa6c142b051445e0fb84d6414ad 235 Gene3D G3DSA:3.40.50.300 10 231 5.3E-70 T 14-10-2018 DA442_05740 bdc62fa6c142b051445e0fb84d6414ad 235 PIRSF PIRSF006755 8 233 1.3E-79 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 DA442_05740 bdc62fa6c142b051445e0fb84d6414ad 235 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 13 183 6.8E-55 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 DA442_05740 bdc62fa6c142b051445e0fb84d6414ad 235 Pfam PF13500 AAA domain 11 218 1.3E-39 T 14-10-2018 DA442_05740 bdc62fa6c142b051445e0fb84d6414ad 235 SUPERFAMILY SSF52540 8 222 3.76E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_18970 221feabc58cdc07884220ddc1ea195cb 306 Gene3D G3DSA:1.10.3720.10 68 303 2.2E-51 T 14-10-2018 IPR035906 MetI-like superfamily DA442_18970 221feabc58cdc07884220ddc1ea195cb 306 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 71 140 2.4E-15 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DA442_18970 221feabc58cdc07884220ddc1ea195cb 306 SUPERFAMILY SSF161098 72 293 7.33E-41 T 14-10-2018 IPR035906 MetI-like superfamily DA442_18970 221feabc58cdc07884220ddc1ea195cb 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 300 2.6E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DA442_17720 e62033d22335e71c0c4c44fd0ee332c5 212 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 13 165 2.1E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DA442_17720 e62033d22335e71c0c4c44fd0ee332c5 212 SUPERFAMILY SSF56784 11 199 2.46E-32 T 14-10-2018 IPR036412 HAD-like superfamily DA442_17720 e62033d22335e71c0c4c44fd0ee332c5 212 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 88 101 5.0E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DA442_17720 e62033d22335e71c0c4c44fd0ee332c5 212 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 11 22 5.0E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DA442_17720 e62033d22335e71c0c4c44fd0ee332c5 212 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 134 154 5.0E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DA442_17720 e62033d22335e71c0c4c44fd0ee332c5 212 Gene3D G3DSA:3.40.50.1000 12 188 3.4E-51 T 14-10-2018 IPR023214 HAD superfamily DA442_17720 e62033d22335e71c0c4c44fd0ee332c5 212 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 13 172 3.5E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DA442_17720 e62033d22335e71c0c4c44fd0ee332c5 212 Pfam PF13419 Haloacid dehalogenase-like hydrolase 14 171 1.0E-16 T 14-10-2018 DA442_17720 e62033d22335e71c0c4c44fd0ee332c5 212 Gene3D G3DSA:1.10.260.80 24 75 3.4E-51 T 14-10-2018 DA442_18840 619af7f991d081478530724494f94597 214 SUPERFAMILY SSF53098 11 186 3.89E-51 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DA442_18840 619af7f991d081478530724494f94597 214 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 17 185 7.3E-28 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_18840 619af7f991d081478530724494f94597 214 Gene3D G3DSA:3.30.420.10 9 184 1.5E-47 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DA442_18840 619af7f991d081478530724494f94597 214 SMART SM00479 16 183 1.0E-39 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DA442_18840 619af7f991d081478530724494f94597 214 Pfam PF00929 Exonuclease 18 173 9.6E-31 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DA442_14255 bc33b2c45b056a7a1fec8092b3fd6e01 561 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 383 397 - T 14-10-2018 IPR001482 Type II/IV secretion system protein DA442_14255 bc33b2c45b056a7a1fec8092b3fd6e01 561 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 38 143 4.6E-17 T 14-10-2018 IPR007831 General secretory system II, protein E, N-terminal DA442_14255 bc33b2c45b056a7a1fec8092b3fd6e01 561 Gene3D G3DSA:3.30.300.160 63 140 8.7E-9 T 14-10-2018 DA442_14255 bc33b2c45b056a7a1fec8092b3fd6e01 561 Pfam PF00437 Type II/IV secretion system protein 188 455 1.4E-87 T 14-10-2018 IPR001482 Type II/IV secretion system protein DA442_14255 bc33b2c45b056a7a1fec8092b3fd6e01 561 SUPERFAMILY SSF52540 173 558 1.0E-92 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_14255 bc33b2c45b056a7a1fec8092b3fd6e01 561 SUPERFAMILY SSF160246 3 140 3.4E-32 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily DA442_14255 bc33b2c45b056a7a1fec8092b3fd6e01 561 Gene3D G3DSA:3.40.50.300 290 560 1.3E-104 T 14-10-2018 DA442_14255 bc33b2c45b056a7a1fec8092b3fd6e01 561 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 5 558 2.8E-237 T 14-10-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 DA442_14255 bc33b2c45b056a7a1fec8092b3fd6e01 561 Gene3D G3DSA:3.30.450.90 152 288 1.8E-46 T 14-10-2018 DA442_21735 2662937e5c34589986dbac1d058b8437 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 283 3.8E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DA442_21735 2662937e5c34589986dbac1d058b8437 287 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 14 283 6.9E-100 T 14-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 DA442_21735 2662937e5c34589986dbac1d058b8437 287 Gene3D G3DSA:1.10.3720.10 62 285 2.2E-35 T 14-10-2018 IPR035906 MetI-like superfamily DA442_21735 2662937e5c34589986dbac1d058b8437 287 SUPERFAMILY SSF161098 22 274 1.68E-42 T 14-10-2018 IPR035906 MetI-like superfamily DA442_20890 8282280c0e8b5416fdcacde983a75adb 192 PIRSF PIRSF000013 1 192 8.0E-92 T 14-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 DA442_20890 8282280c0e8b5416fdcacde983a75adb 192 Gene3D G3DSA:1.10.3820.10 10 188 2.3E-33 T 14-10-2018 IPR038266 NapC/NirT cytochrome c superfamily DA442_20890 8282280c0e8b5416fdcacde983a75adb 192 SUPERFAMILY SSF48695 13 191 1.26E-55 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily DA442_20890 8282280c0e8b5416fdcacde983a75adb 192 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 15 185 3.1E-70 T 14-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal DA442_05625 5b6f4fde5a2bd714be1b8f0334f5f6ad 150 SUPERFAMILY SSF46785 9 145 3.99E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_05625 5b6f4fde5a2bd714be1b8f0334f5f6ad 150 Gene3D G3DSA:1.10.10.10 6 147 2.2E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_05625 5b6f4fde5a2bd714be1b8f0334f5f6ad 150 ProSitePatterns PS01117 MarR-type HTH domain signature. 72 107 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site DA442_05625 5b6f4fde5a2bd714be1b8f0334f5f6ad 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 58 74 8.5E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DA442_05625 5b6f4fde5a2bd714be1b8f0334f5f6ad 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 94 110 8.5E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DA442_05625 5b6f4fde5a2bd714be1b8f0334f5f6ad 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 90 8.5E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DA442_05625 5b6f4fde5a2bd714be1b8f0334f5f6ad 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 124 144 8.5E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DA442_05625 5b6f4fde5a2bd714be1b8f0334f5f6ad 150 SMART SM00347 34 134 4.5E-18 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DA442_05625 5b6f4fde5a2bd714be1b8f0334f5f6ad 150 Pfam PF01047 MarR family 46 97 4.8E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DA442_03680 66e1d0bf8c501313dd8b653cc1aa075d 92 Pfam PF04359 Protein of unknown function (DUF493) 12 92 1.9E-29 T 14-10-2018 IPR007454 Uncharacterised protein family UPF0250 DA442_03680 66e1d0bf8c501313dd8b653cc1aa075d 92 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 6 92 26.375 T 14-10-2018 IPR007454 Uncharacterised protein family UPF0250 DA442_03680 66e1d0bf8c501313dd8b653cc1aa075d 92 SUPERFAMILY SSF117991 7 92 3.66E-31 T 14-10-2018 IPR027471 YbeD-like domain superfamily DA442_03680 66e1d0bf8c501313dd8b653cc1aa075d 92 Gene3D G3DSA:3.30.70.260 6 92 2.8E-33 T 14-10-2018 DA442_04295 699abad4c163bc79a146f7f0449b05fc 251 Pfam PF01925 Sulfite exporter TauE/SafE 10 249 4.6E-34 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 DA442_00310 80d2c19ebe08941088820789aab58d5f 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 3.8E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_00310 80d2c19ebe08941088820789aab58d5f 311 Gene3D G3DSA:3.40.190.10 173 274 2.1E-15 T 14-10-2018 DA442_00310 80d2c19ebe08941088820789aab58d5f 311 SUPERFAMILY SSF46785 7 88 4.69E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_00310 80d2c19ebe08941088820789aab58d5f 311 Gene3D G3DSA:1.10.10.10 1 91 9.9E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_00310 80d2c19ebe08941088820789aab58d5f 311 Pfam PF03466 LysR substrate binding domain 95 255 8.8E-11 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_00310 80d2c19ebe08941088820789aab58d5f 311 SUPERFAMILY SSF53850 92 300 7.96E-18 T 14-10-2018 DA442_00310 80d2c19ebe08941088820789aab58d5f 311 Gene3D G3DSA:3.40.190.10 92 297 2.1E-15 T 14-10-2018 DA442_17970 436c4a08d1eb95800eb18c0fccec4700 124 SUPERFAMILY SSF46955 3 111 3.55E-25 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DA442_17970 436c4a08d1eb95800eb18c0fccec4700 124 Pfam PF13411 MerR HTH family regulatory protein 4 69 3.6E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DA442_17970 436c4a08d1eb95800eb18c0fccec4700 124 SMART SM00422 4 71 6.0E-20 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DA442_17970 436c4a08d1eb95800eb18c0fccec4700 124 Gene3D G3DSA:1.10.1660.10 1 124 5.8E-26 T 14-10-2018 DA442_21395 e41b60d34651f8b8c524414530b634c9 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 1.4E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_21395 e41b60d34651f8b8c524414530b634c9 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 1.4E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_21395 e41b60d34651f8b8c524414530b634c9 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 1.4E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_21395 e41b60d34651f8b8c524414530b634c9 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 1.4E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_21395 e41b60d34651f8b8c524414530b634c9 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 1.4E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_21395 e41b60d34651f8b8c524414530b634c9 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.4E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_21395 e41b60d34651f8b8c524414530b634c9 239 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 237 1.4E-61 T 14-10-2018 DA442_21395 e41b60d34651f8b8c524414530b634c9 239 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 162 8.5E-4 T 14-10-2018 DA442_21395 e41b60d34651f8b8c524414530b634c9 239 SUPERFAMILY SSF51735 4 238 2.82E-80 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_21395 e41b60d34651f8b8c524414530b634c9 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DA442_21395 e41b60d34651f8b8c524414530b634c9 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 3.4E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_21395 e41b60d34651f8b8c524414530b634c9 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 3.4E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_21395 e41b60d34651f8b8c524414530b634c9 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 3.4E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_21395 e41b60d34651f8b8c524414530b634c9 239 Gene3D G3DSA:3.40.50.720 1 239 7.4E-81 T 14-10-2018 DA442_17170 4abb12192e19df1d624f72b2d79c12b1 386 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 3 370 2.8E-69 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 DA442_17170 4abb12192e19df1d624f72b2d79c12b1 386 SUPERFAMILY SSF103473 2 372 4.05E-56 T 14-10-2018 IPR036259 MFS transporter superfamily DA442_17170 4abb12192e19df1d624f72b2d79c12b1 386 Pfam PF07690 Major Facilitator Superfamily 5 341 1.3E-46 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DA442_17170 4abb12192e19df1d624f72b2d79c12b1 386 Gene3D G3DSA:1.20.1720.10 1 374 8.6E-89 T 14-10-2018 DA442_17170 4abb12192e19df1d624f72b2d79c12b1 386 ProSitePatterns PS00216 Sugar transport proteins signature 1. 54 70 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DA442_05380 8e78ce5ed45d07de8e17fbf294051c2a 215 Hamap MF_01150 Chaperone protein TorD [torD]. 3 212 34.695 T 14-10-2018 IPR023069 Chaperone TorD DA442_05380 8e78ce5ed45d07de8e17fbf294051c2a 215 Gene3D G3DSA:1.20.1280.20 129 214 1.1E-24 T 14-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DA442_05380 8e78ce5ed45d07de8e17fbf294051c2a 215 SUPERFAMILY SSF89155 8 212 1.83E-51 T 14-10-2018 IPR036411 TorD-like superfamily DA442_05380 8e78ce5ed45d07de8e17fbf294051c2a 215 Gene3D G3DSA:1.20.120.1820 3 126 8.4E-39 T 14-10-2018 DA442_05380 8e78ce5ed45d07de8e17fbf294051c2a 215 Pfam PF02613 Nitrate reductase delta subunit 50 183 1.4E-36 T 14-10-2018 IPR020945 DMSO/Nitrate reductase chaperone DA442_02300 f5211deaf3842acb0073fba9bce57569 121 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 7 119 1.2E-35 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 DA442_02300 f5211deaf3842acb0073fba9bce57569 121 SUPERFAMILY SSF52980 7 111 1.61E-22 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DA442_02300 f5211deaf3842acb0073fba9bce57569 121 Pfam PF02021 Uncharacterised protein family UPF0102 13 104 7.7E-29 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 DA442_02300 f5211deaf3842acb0073fba9bce57569 121 Gene3D G3DSA:3.40.1350.10 13 121 2.9E-33 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 DA442_02300 f5211deaf3842acb0073fba9bce57569 121 Hamap MF_00048 UPF0102 protein YraN [yraN]. 6 117 24.326 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 DA442_24525 08b40f93fd63c8d3770de89e3d154116 248 Gene3D G3DSA:1.10.530.10 72 217 8.0E-32 T 14-10-2018 DA442_24525 08b40f93fd63c8d3770de89e3d154116 248 SUPERFAMILY SSF53955 72 208 8.21E-36 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily DA442_24525 08b40f93fd63c8d3770de89e3d154116 248 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 93 121 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 DA442_24525 08b40f93fd63c8d3770de89e3d154116 248 Pfam PF01464 Transglycosylase SLT domain 80 187 2.2E-26 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 DA442_05050 74e8c041b4be027701c8f322d0098b86 663 SMART SM00283 401 662 6.1E-74 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_05050 74e8c041b4be027701c8f322d0098b86 663 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 470 629 4.2E-44 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_05050 74e8c041b4be027701c8f322d0098b86 663 SUPERFAMILY SSF58104 354 663 2.62E-73 T 14-10-2018 DA442_05050 74e8c041b4be027701c8f322d0098b86 663 SMART SM00304 334 386 4.7E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_05050 74e8c041b4be027701c8f322d0098b86 663 Gene3D G3DSA:1.10.287.950 333 663 3.0E-70 T 14-10-2018 DA442_02230 1b01eb5006977880fb74f7246f20443e 455 SUPERFAMILY SSF50156 225 350 1.97E-27 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 DA442_02230 1b01eb5006977880fb74f7246f20443e 455 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 377 443 4.7E-9 T 14-10-2018 IPR001478 PDZ domain GO:0005515 DA442_02230 1b01eb5006977880fb74f7246f20443e 455 Pfam PF13180 PDZ domain 268 358 3.5E-17 T 14-10-2018 IPR001478 PDZ domain GO:0005515 DA442_02230 1b01eb5006977880fb74f7246f20443e 455 SMART SM00228 267 349 1.9E-17 T 14-10-2018 IPR001478 PDZ domain GO:0005515 DA442_02230 1b01eb5006977880fb74f7246f20443e 455 SMART SM00228 374 447 4.8E-9 T 14-10-2018 IPR001478 PDZ domain GO:0005515 DA442_02230 1b01eb5006977880fb74f7246f20443e 455 Gene3D G3DSA:2.30.42.10 265 361 2.3E-27 T 14-10-2018 DA442_02230 1b01eb5006977880fb74f7246f20443e 455 PRINTS PR00834 HtrA/DegQ protease family signature 221 238 1.1E-56 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DA442_02230 1b01eb5006977880fb74f7246f20443e 455 PRINTS PR00834 HtrA/DegQ protease family signature 164 188 1.1E-56 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DA442_02230 1b01eb5006977880fb74f7246f20443e 455 PRINTS PR00834 HtrA/DegQ protease family signature 199 216 1.1E-56 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DA442_02230 1b01eb5006977880fb74f7246f20443e 455 PRINTS PR00834 HtrA/DegQ protease family signature 102 114 1.1E-56 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DA442_02230 1b01eb5006977880fb74f7246f20443e 455 PRINTS PR00834 HtrA/DegQ protease family signature 123 143 1.1E-56 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DA442_02230 1b01eb5006977880fb74f7246f20443e 455 PRINTS PR00834 HtrA/DegQ protease family signature 307 319 1.1E-56 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DA442_02230 1b01eb5006977880fb74f7246f20443e 455 SUPERFAMILY SSF50156 379 454 1.58E-15 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 DA442_02230 1b01eb5006977880fb74f7246f20443e 455 Pfam PF13365 Trypsin-like peptidase domain 92 228 6.2E-31 T 14-10-2018 DA442_02230 1b01eb5006977880fb74f7246f20443e 455 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 39 453 2.9E-164 T 14-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 DA442_02230 1b01eb5006977880fb74f7246f20443e 455 Gene3D G3DSA:2.40.10.120 37 261 1.9E-84 T 14-10-2018 DA442_02230 1b01eb5006977880fb74f7246f20443e 455 SUPERFAMILY SSF50494 37 258 1.17E-64 T 14-10-2018 IPR009003 Peptidase S1, PA clan DA442_02230 1b01eb5006977880fb74f7246f20443e 455 Gene3D G3DSA:2.30.42.10 362 455 1.0E-28 T 14-10-2018 DA442_16810 6088d8b029624c601e2b7a733df441b5 322 PIRSF PIRSF003097 24 318 1.5E-61 T 14-10-2018 IPR004513 Cell division protein FtsX GO:0016021 DA442_19040 696b9f5942a528fa5f6c5878e80ce947 404 Gene3D G3DSA:3.90.550.10 1 286 1.1E-93 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DA442_19040 696b9f5942a528fa5f6c5878e80ce947 404 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 96 104 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 DA442_19040 696b9f5942a528fa5f6c5878e80ce947 404 Pfam PF00483 Nucleotidyl transferase 6 272 4.9E-70 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 DA442_19040 696b9f5942a528fa5f6c5878e80ce947 404 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 DA442_19040 696b9f5942a528fa5f6c5878e80ce947 404 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 5 378 9.9E-158 T 14-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 DA442_19040 696b9f5942a528fa5f6c5878e80ce947 404 SUPERFAMILY SSF51161 312 395 2.21E-17 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily DA442_19040 696b9f5942a528fa5f6c5878e80ce947 404 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 194 204 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 DA442_19040 696b9f5942a528fa5f6c5878e80ce947 404 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 404 50.037 T 14-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 DA442_19040 696b9f5942a528fa5f6c5878e80ce947 404 SUPERFAMILY SSF53448 4 357 3.29E-79 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DA442_19040 696b9f5942a528fa5f6c5878e80ce947 404 Gene3D G3DSA:2.160.10.10 287 403 4.5E-33 T 14-10-2018 DA442_14805 876aec4ae982d38ccdd48681c1726b0a 392 Pfam PF06969 HemN C-terminal domain 314 374 1.0E-8 T 14-10-2018 IPR010723 HemN, C-terminal DA442_14805 876aec4ae982d38ccdd48681c1726b0a 392 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 378 2.0E-136 T 14-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 DA442_14805 876aec4ae982d38ccdd48681c1726b0a 392 SMART SM00729 6 227 2.0E-54 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DA442_14805 876aec4ae982d38ccdd48681c1726b0a 392 Gene3D G3DSA:3.80.30.20 2 308 9.2E-97 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe DA442_14805 876aec4ae982d38ccdd48681c1726b0a 392 SUPERFAMILY SSF102114 4 386 1.57E-111 T 14-10-2018 DA442_14805 876aec4ae982d38ccdd48681c1726b0a 392 Pfam PF04055 Radical SAM superfamily 11 181 2.3E-18 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DA442_05445 f554ba3c2e200cbc0fe7ad29be70ecd7 245 PIRSF PIRSF006325 4 245 6.7E-125 T 14-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 DA442_05445 f554ba3c2e200cbc0fe7ad29be70ecd7 245 SUPERFAMILY SSF53335 23 245 4.03E-41 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_05445 f554ba3c2e200cbc0fe7ad29be70ecd7 245 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 8 245 1.1E-117 T 14-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 DA442_05445 f554ba3c2e200cbc0fe7ad29be70ecd7 245 Gene3D G3DSA:3.40.50.150 21 245 1.2E-64 T 14-10-2018 DA442_05445 f554ba3c2e200cbc0fe7ad29be70ecd7 245 Pfam PF13649 Methyltransferase domain 63 161 9.4E-14 T 14-10-2018 DA442_05445 f554ba3c2e200cbc0fe7ad29be70ecd7 245 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 6 245 43.199 T 14-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 DA442_01690 e13b15fe7f24eef660c6a0f3bf18ab62 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.251 T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 DA442_01690 e13b15fe7f24eef660c6a0f3bf18ab62 176 Gene3D G3DSA:3.90.80.10 1 175 2.3E-67 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 DA442_01690 e13b15fe7f24eef660c6a0f3bf18ab62 176 Pfam PF00719 Inorganic pyrophosphatase 18 173 3.1E-52 T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 DA442_01690 e13b15fe7f24eef660c6a0f3bf18ab62 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 DA442_01690 e13b15fe7f24eef660c6a0f3bf18ab62 176 SUPERFAMILY SSF50324 3 174 2.09E-65 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 DA442_12900 13300a2f74d058ab2116624221584c12 848 Gene3D G3DSA:3.20.20.80 524 844 4.6E-76 T 14-10-2018 DA442_12900 13300a2f74d058ab2116624221584c12 848 Gene3D G3DSA:2.60.40.10 431 523 4.9E-21 T 14-10-2018 IPR013783 Immunoglobulin-like fold DA442_12900 13300a2f74d058ab2116624221584c12 848 SMART SM00495 28 74 3.8E-10 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 DA442_12900 13300a2f74d058ab2116624221584c12 848 SMART SM00495 279 328 0.0094 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 DA442_12900 13300a2f74d058ab2116624221584c12 848 Gene3D G3DSA:2.10.10.20 11 79 1.9E-11 T 14-10-2018 DA442_12900 13300a2f74d058ab2116624221584c12 848 ProSitePatterns PS01095 Chitinases family 18 active site. 639 647 - T 14-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 DA442_12900 13300a2f74d058ab2116624221584c12 848 Pfam PF00704 Glycosyl hydrolases family 18 527 827 5.3E-24 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 DA442_12900 13300a2f74d058ab2116624221584c12 848 SUPERFAMILY SSF51055 17 78 2.94E-13 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 DA442_12900 13300a2f74d058ab2116624221584c12 848 SUPERFAMILY SSF51445 524 835 1.66E-47 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DA442_12900 13300a2f74d058ab2116624221584c12 848 SMART SM00636 525 827 3.0E-4 T 14-10-2018 IPR011583 Chitinase II GO:0008061 DA442_12900 13300a2f74d058ab2116624221584c12 848 Gene3D G3DSA:2.60.40.10 85 175 2.8E-20 T 14-10-2018 IPR013783 Immunoglobulin-like fold DA442_12900 13300a2f74d058ab2116624221584c12 848 Gene3D G3DSA:2.60.40.10 337 429 4.6E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold DA442_12900 13300a2f74d058ab2116624221584c12 848 Gene3D G3DSA:2.60.40.10 179 273 6.4E-22 T 14-10-2018 IPR013783 Immunoglobulin-like fold DA442_22495 0bceafce5ebd89a37afc4a60455643c5 686 SUPERFAMILY SSF51445 189 655 5.58E-92 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DA442_22495 0bceafce5ebd89a37afc4a60455643c5 686 SMART SM00642 203 646 1.8E-92 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DA442_22495 0bceafce5ebd89a37afc4a60455643c5 686 PIRSF PIRSF036917 1 685 0.0 T 14-10-2018 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 DA442_22495 0bceafce5ebd89a37afc4a60455643c5 686 Gene3D G3DSA:3.20.20.80 433 653 2.6E-37 T 14-10-2018 DA442_22495 0bceafce5ebd89a37afc4a60455643c5 686 Gene3D G3DSA:3.20.20.80 186 421 8.2E-56 T 14-10-2018 DA442_22495 0bceafce5ebd89a37afc4a60455643c5 686 Pfam PF00128 Alpha amylase, catalytic domain 236 606 1.1E-51 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DA442_08470 172e9b387d592147d91dc7b91bf389e5 342 SUPERFAMILY SSF53850 29 259 1.09E-49 T 14-10-2018 DA442_08470 172e9b387d592147d91dc7b91bf389e5 342 Gene3D G3DSA:3.40.190.10 28 257 7.5E-51 T 14-10-2018 DA442_08470 172e9b387d592147d91dc7b91bf389e5 342 Gene3D G3DSA:3.40.190.10 130 225 7.5E-51 T 14-10-2018 DA442_08470 172e9b387d592147d91dc7b91bf389e5 342 SMART SM00062 38 267 2.7E-53 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DA442_08470 172e9b387d592147d91dc7b91bf389e5 342 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 257 7.4E-30 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DA442_16780 a5ad08fa89194c7e214316145f395d38 183 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 19 178 23.643 T 14-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 DA442_16780 a5ad08fa89194c7e214316145f395d38 183 Gene3D G3DSA:3.40.1410.10 13 178 5.1E-41 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DA442_16780 a5ad08fa89194c7e214316145f395d38 183 Pfam PF04345 Chorismate lyase 18 182 3.3E-57 T 14-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 DA442_16780 a5ad08fa89194c7e214316145f395d38 183 SUPERFAMILY SSF64288 11 178 6.28E-46 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DA442_18570 0076840d548a3268936c1406446ef2a6 456 Pfam PF00990 Diguanylate cyclase, GGDEF domain 307 453 9.7E-34 T 14-10-2018 IPR000160 GGDEF domain DA442_18570 0076840d548a3268936c1406446ef2a6 456 Gene3D G3DSA:3.30.70.270 305 456 3.3E-38 T 14-10-2018 DA442_18570 0076840d548a3268936c1406446ef2a6 456 SMART SM00267 296 456 9.2E-33 T 14-10-2018 IPR000160 GGDEF domain DA442_18570 0076840d548a3268936c1406446ef2a6 456 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 306 453 4.4E-35 T 14-10-2018 IPR000160 GGDEF domain DA442_18570 0076840d548a3268936c1406446ef2a6 456 SUPERFAMILY SSF55073 310 452 1.33E-32 T 14-10-2018 IPR029787 Nucleotide cyclase DA442_03445 a442f44dde8d37ab730054c0a00e1ca0 490 PRINTS PR00934 X-His dipeptidase (M25) signature 163 181 4.4E-89 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DA442_03445 a442f44dde8d37ab730054c0a00e1ca0 490 PRINTS PR00934 X-His dipeptidase (M25) signature 210 227 4.4E-89 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DA442_03445 a442f44dde8d37ab730054c0a00e1ca0 490 PRINTS PR00934 X-His dipeptidase (M25) signature 105 123 4.4E-89 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DA442_03445 a442f44dde8d37ab730054c0a00e1ca0 490 PRINTS PR00934 X-His dipeptidase (M25) signature 84 103 4.4E-89 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DA442_03445 a442f44dde8d37ab730054c0a00e1ca0 490 PRINTS PR00934 X-His dipeptidase (M25) signature 367 385 4.4E-89 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DA442_03445 a442f44dde8d37ab730054c0a00e1ca0 490 PRINTS PR00934 X-His dipeptidase (M25) signature 255 274 4.4E-89 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DA442_03445 a442f44dde8d37ab730054c0a00e1ca0 490 PRINTS PR00934 X-His dipeptidase (M25) signature 454 476 4.4E-89 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DA442_03445 a442f44dde8d37ab730054c0a00e1ca0 490 PRINTS PR00934 X-His dipeptidase (M25) signature 139 156 4.4E-89 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DA442_03445 a442f44dde8d37ab730054c0a00e1ca0 490 PRINTS PR00934 X-His dipeptidase (M25) signature 432 448 4.4E-89 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DA442_03445 a442f44dde8d37ab730054c0a00e1ca0 490 Pfam PF01546 Peptidase family M20/M25/M40 77 473 2.8E-21 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 DA442_03445 a442f44dde8d37ab730054c0a00e1ca0 490 SUPERFAMILY SSF53187 15 486 1.28E-62 T 14-10-2018 DA442_03445 a442f44dde8d37ab730054c0a00e1ca0 490 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 13 486 6.6E-183 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DA442_03445 a442f44dde8d37ab730054c0a00e1ca0 490 PIRSF PIRSF016599 5 489 3.2E-217 T 14-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 DA442_03445 a442f44dde8d37ab730054c0a00e1ca0 490 Gene3D G3DSA:3.40.630.10 376 490 6.3E-24 T 14-10-2018 DA442_03445 a442f44dde8d37ab730054c0a00e1ca0 490 Gene3D G3DSA:3.40.630.10 1 233 1.3E-65 T 14-10-2018 DA442_03445 a442f44dde8d37ab730054c0a00e1ca0 490 Pfam PF07687 Peptidase dimerisation domain 211 296 1.6E-8 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain DA442_22130 337ec0cab99883c85d413714258800ff 444 Pfam PF02954 Bacterial regulatory protein, Fis family 391 427 2.8E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DA442_22130 337ec0cab99883c85d413714258800ff 444 Gene3D G3DSA:1.10.8.60 297 372 2.5E-23 T 14-10-2018 DA442_22130 337ec0cab99883c85d413714258800ff 444 Gene3D G3DSA:1.10.10.60 377 437 3.6E-11 T 14-10-2018 DA442_22130 337ec0cab99883c85d413714258800ff 444 SMART SM00382 146 289 3.3E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_22130 337ec0cab99883c85d413714258800ff 444 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 150 163 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DA442_22130 337ec0cab99883c85d413714258800ff 444 Gene3D G3DSA:3.40.50.300 119 296 1.7E-66 T 14-10-2018 DA442_22130 337ec0cab99883c85d413714258800ff 444 SUPERFAMILY SSF46689 336 427 7.17E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_22130 337ec0cab99883c85d413714258800ff 444 SUPERFAMILY SSF52172 2 171 2.85E-19 T 14-10-2018 IPR011006 CheY-like superfamily DA442_22130 337ec0cab99883c85d413714258800ff 444 SUPERFAMILY SSF52540 130 365 1.06E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_22130 337ec0cab99883c85d413714258800ff 444 Pfam PF00158 Sigma-54 interaction domain 127 292 2.0E-70 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DA442_22130 337ec0cab99883c85d413714258800ff 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 336 345 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site DA442_22130 337ec0cab99883c85d413714258800ff 444 Gene3D G3DSA:3.40.50.2300 1 118 2.6E-12 T 14-10-2018 DA442_22130 337ec0cab99883c85d413714258800ff 444 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 212 227 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DA442_20280 8195e7ac3dfba06f7a5cccc300c441b8 501 Gene3D G3DSA:3.40.50.300 1 239 3.2E-57 T 14-10-2018 DA442_20280 8195e7ac3dfba06f7a5cccc300c441b8 501 SUPERFAMILY SSF52540 269 480 2.55E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_20280 8195e7ac3dfba06f7a5cccc300c441b8 501 SUPERFAMILY SSF52540 5 228 3.59E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_20280 8195e7ac3dfba06f7a5cccc300c441b8 501 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_20280 8195e7ac3dfba06f7a5cccc300c441b8 501 Gene3D G3DSA:3.40.50.300 259 499 3.4E-47 T 14-10-2018 DA442_20280 8195e7ac3dfba06f7a5cccc300c441b8 501 SMART SM00382 278 472 1.5E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_20280 8195e7ac3dfba06f7a5cccc300c441b8 501 SMART SM00382 30 219 4.6E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_20280 8195e7ac3dfba06f7a5cccc300c441b8 501 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_20280 8195e7ac3dfba06f7a5cccc300c441b8 501 Pfam PF00005 ABC transporter 21 170 8.2E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_20280 8195e7ac3dfba06f7a5cccc300c441b8 501 Pfam PF00005 ABC transporter 270 423 7.2E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_06125 b21dd14e5e2ceb2aa1d5788f667b1328 203 Gene3D G3DSA:1.20.120.1760 3 199 2.5E-20 T 14-10-2018 DA442_06125 b21dd14e5e2ceb2aa1d5788f667b1328 203 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 89 1.5E-9 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 DA442_06125 b21dd14e5e2ceb2aa1d5788f667b1328 203 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 89 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 DA442_13805 10c6729511dfcadeb1ac350cda518ac1 404 Pfam PF13657 HipA N-terminal domain 8 112 7.4E-18 T 14-10-2018 IPR017508 HipA, N-terminal subdomain 1 DA442_13805 10c6729511dfcadeb1ac350cda518ac1 404 Gene3D G3DSA:1.10.1070.20 241 357 3.4E-8 T 14-10-2018 DA442_13805 10c6729511dfcadeb1ac350cda518ac1 404 Pfam PF07804 HipA-like C-terminal domain 140 377 4.4E-52 T 14-10-2018 IPR012893 HipA-like, C-terminal DA442_13805 10c6729511dfcadeb1ac350cda518ac1 404 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 8 112 9.5E-15 T 14-10-2018 IPR017508 HipA, N-terminal subdomain 1 DA442_18380 6f02c67ecf70a8a1aac846679031cbe2 410 Pfam PF07690 Major Facilitator Superfamily 15 295 3.3E-30 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DA442_18380 6f02c67ecf70a8a1aac846679031cbe2 410 Gene3D G3DSA:1.20.1250.20 3 401 7.1E-57 T 14-10-2018 DA442_18380 6f02c67ecf70a8a1aac846679031cbe2 410 SUPERFAMILY SSF103473 9 398 8.63E-57 T 14-10-2018 IPR036259 MFS transporter superfamily DA442_06145 085d14be9fca6f9dc0a6e4e9662dfbde 225 Pfam PF09335 SNARE associated Golgi protein 62 178 2.0E-24 T 14-10-2018 IPR032816 SNARE associated Golgi protein DA442_11920 406b47897a4278978920ac2c02b3b3cf 229 Gene3D G3DSA:3.40.50.720 2 229 3.8E-62 T 14-10-2018 DA442_11920 406b47897a4278978920ac2c02b3b3cf 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 7.0E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_11920 406b47897a4278978920ac2c02b3b3cf 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 7.0E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_11920 406b47897a4278978920ac2c02b3b3cf 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 7.0E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_11920 406b47897a4278978920ac2c02b3b3cf 229 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 7.0E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_11920 406b47897a4278978920ac2c02b3b3cf 229 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 4.7E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_11920 406b47897a4278978920ac2c02b3b3cf 229 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 4.7E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_11920 406b47897a4278978920ac2c02b3b3cf 229 Pfam PF00106 short chain dehydrogenase 5 189 1.4E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_11920 406b47897a4278978920ac2c02b3b3cf 229 SUPERFAMILY SSF51735 3 229 2.04E-77 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_18245 6ff86412c3e4448acf3c48c0f47242ac 334 SUPERFAMILY SSF53822 32 296 1.1E-38 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DA442_18245 6ff86412c3e4448acf3c48c0f47242ac 334 Gene3D G3DSA:3.40.50.2300 140 326 2.3E-120 T 14-10-2018 DA442_18245 6ff86412c3e4448acf3c48c0f47242ac 334 Gene3D G3DSA:3.40.50.2300 33 302 2.3E-120 T 14-10-2018 DA442_18245 6ff86412c3e4448acf3c48c0f47242ac 334 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 31 302 1.3E-31 T 14-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain DA442_18245 6ff86412c3e4448acf3c48c0f47242ac 334 TIGRFAM TIGR02955 TMAO_TorT: TMAO reductase system periplasmic protein TorT 32 330 9.8E-135 T 14-10-2018 IPR014301 TMAO reductase system, periplasmic protein TorT DA442_25245 528943f370092469b9047da0e8028647 302 Pfam PF00892 EamA-like transporter family 151 280 5.3E-19 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DA442_25245 528943f370092469b9047da0e8028647 302 Pfam PF00892 EamA-like transporter family 3 135 3.2E-19 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DA442_25245 528943f370092469b9047da0e8028647 302 SUPERFAMILY SSF103481 35 138 3.4E-11 T 14-10-2018 DA442_25245 528943f370092469b9047da0e8028647 302 SUPERFAMILY SSF103481 187 283 1.31E-10 T 14-10-2018 DA442_21205 a6405b82848be8dde36a1a7afc3c6f5c 199 PIRSF PIRSF001488 1 199 2.4E-62 T 14-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL DA442_21205 a6405b82848be8dde36a1a7afc3c6f5c 199 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 DA442_21205 a6405b82848be8dde36a1a7afc3c6f5c 199 SUPERFAMILY SSF52833 20 197 9.64E-45 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_21205 a6405b82848be8dde36a1a7afc3c6f5c 199 Gene3D G3DSA:3.40.30.10 17 199 4.3E-52 T 14-10-2018 DA442_21205 a6405b82848be8dde36a1a7afc3c6f5c 199 Pfam PF01323 DSBA-like thioredoxin domain 40 179 1.9E-21 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 DA442_18040 16c8dbb8da1e37f14e234444ca2af0b8 461 Pfam PF01565 FAD binding domain 43 175 5.5E-33 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 DA442_18040 16c8dbb8da1e37f14e234444ca2af0b8 461 Gene3D G3DSA:3.40.462.20 209 420 4.8E-123 T 14-10-2018 DA442_18040 16c8dbb8da1e37f14e234444ca2af0b8 461 Gene3D G3DSA:3.30.43.10 18 96 4.6E-30 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 DA442_18040 16c8dbb8da1e37f14e234444ca2af0b8 461 Gene3D G3DSA:3.30.465.10 109 447 4.8E-123 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DA442_18040 16c8dbb8da1e37f14e234444ca2af0b8 461 SUPERFAMILY SSF56176 16 209 2.1E-59 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DA442_18040 16c8dbb8da1e37f14e234444ca2af0b8 461 ProSitePatterns PS00862 Oxygen oxidoreductases covalent FAD-binding site. 43 76 - T 14-10-2018 IPR006093 Oxygen oxidoreductase covalent FAD-binding site GO:0016491|GO:0055114 DA442_18040 16c8dbb8da1e37f14e234444ca2af0b8 461 Pfam PF08031 Berberine and berberine like 415 459 2.3E-16 T 14-10-2018 IPR012951 Berberine/berberine-like GO:0016491|GO:0050660|GO:0055114 DA442_06195 c54394e1c684f182a3ad5080c10ef731 571 SUPERFAMILY SSF55816 370 548 7.19E-41 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_06195 c54394e1c684f182a3ad5080c10ef731 571 Gene3D G3DSA:3.90.780.10 369 554 1.0E-44 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_06195 c54394e1c684f182a3ad5080c10ef731 571 Pfam PF00149 Calcineurin-like phosphoesterase 39 264 3.4E-17 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DA442_06195 c54394e1c684f182a3ad5080c10ef731 571 ProSitePatterns PS00786 5'-nucleotidase signature 2. 114 125 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_06195 c54394e1c684f182a3ad5080c10ef731 571 SUPERFAMILY SSF56300 34 367 3.56E-90 T 14-10-2018 DA442_06195 c54394e1c684f182a3ad5080c10ef731 571 Gene3D G3DSA:3.60.21.10 33 368 1.1E-110 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like DA442_06195 c54394e1c684f182a3ad5080c10ef731 571 Pfam PF02872 5'-nucleotidase, C-terminal domain 372 519 2.1E-30 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_06195 c54394e1c684f182a3ad5080c10ef731 571 PRINTS PR01607 Apyrase family signature 293 313 1.7E-44 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_06195 c54394e1c684f182a3ad5080c10ef731 571 PRINTS PR01607 Apyrase family signature 217 234 1.7E-44 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_06195 c54394e1c684f182a3ad5080c10ef731 571 PRINTS PR01607 Apyrase family signature 494 513 1.7E-44 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_06195 c54394e1c684f182a3ad5080c10ef731 571 PRINTS PR01607 Apyrase family signature 37 55 1.7E-44 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_06195 c54394e1c684f182a3ad5080c10ef731 571 PRINTS PR01607 Apyrase family signature 248 271 1.7E-44 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_06195 c54394e1c684f182a3ad5080c10ef731 571 PRINTS PR01607 Apyrase family signature 425 448 1.7E-44 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_03575 0f46cd27b73988107c853cd894deea03 260 SMART SM00475 3 254 4.9E-72 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 DA442_03575 0f46cd27b73988107c853cd894deea03 260 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 161 2.2E-31 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 DA442_03575 0f46cd27b73988107c853cd894deea03 260 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 255 45.947 T 14-10-2018 IPR022895 Flap endonuclease Xni GO:0048256 DA442_03575 0f46cd27b73988107c853cd894deea03 260 Gene3D G3DSA:3.40.50.1010 1 166 5.5E-53 T 14-10-2018 DA442_03575 0f46cd27b73988107c853cd894deea03 260 SMART SM00279 167 202 7.7E-10 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 DA442_03575 0f46cd27b73988107c853cd894deea03 260 SUPERFAMILY SSF88723 4 164 1.03E-39 T 14-10-2018 IPR029060 PIN-like domain superfamily DA442_03575 0f46cd27b73988107c853cd894deea03 260 SUPERFAMILY SSF47807 165 257 2.99E-21 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily DA442_03575 0f46cd27b73988107c853cd894deea03 260 Gene3D G3DSA:1.10.150.20 167 255 1.1E-22 T 14-10-2018 DA442_03575 0f46cd27b73988107c853cd894deea03 260 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 165 258 3.7E-24 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 DA442_02585 7ccb9f4f4cc8e0a8374bdc5b3137be8f 258 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 38.941 T 14-10-2018 IPR005583 Peroxide stress protein YaaA DA442_02585 7ccb9f4f4cc8e0a8374bdc5b3137be8f 258 Pfam PF03883 Peroxide stress protein YaaA 1 243 4.1E-95 T 14-10-2018 IPR005583 Peroxide stress protein YaaA DA442_20980 54b77f07f31c2d836f1e6d10f2c1d08d 345 Pfam PF11168 Protein of unknown function (DUF2955) 15 154 3.3E-53 T 14-10-2018 IPR022604 Protein of unknown function DUF2955 DA442_20980 54b77f07f31c2d836f1e6d10f2c1d08d 345 PIRSF PIRSF029594 8 345 3.3E-140 T 14-10-2018 IPR016926 Uncharacterised conserved protein UCP029594 DA442_09265 8ee21bf5be296db6da85bd012d94036e 248 SUPERFAMILY SSF52317 5 246 1.1E-38 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DA442_09265 8ee21bf5be296db6da85bd012d94036e 248 Gene3D G3DSA:3.40.50.880 4 248 7.8E-63 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DA442_09265 8ee21bf5be296db6da85bd012d94036e 248 Pfam PF07722 Peptidase C26 7 226 3.4E-70 T 14-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 DA442_00565 a7f99f3749c2f6ac980768dec828bae4 219 Pfam PF01926 50S ribosome-binding GTPase 29 147 1.9E-20 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DA442_00565 a7f99f3749c2f6ac980768dec828bae4 219 Gene3D G3DSA:3.40.50.300 3 201 2.0E-58 T 14-10-2018 DA442_00565 a7f99f3749c2f6ac980768dec828bae4 219 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 15 198 27.634 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 DA442_00565 a7f99f3749c2f6ac980768dec828bae4 219 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 11 194 1.9E-74 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 DA442_00565 a7f99f3749c2f6ac980768dec828bae4 219 SUPERFAMILY SSF52540 6 197 7.83E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_04705 0ae1431c995cd70bcbe45a11d8456eb6 414 Pfam PF01494 FAD binding domain 7 164 1.5E-15 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 DA442_04705 0ae1431c995cd70bcbe45a11d8456eb6 414 SUPERFAMILY SSF51905 4 388 2.72E-45 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_04705 0ae1431c995cd70bcbe45a11d8456eb6 414 Gene3D G3DSA:3.50.50.60 2 413 5.0E-126 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_00200 4c5d8632664967d43009b7baa775eafd 137 Gene3D G3DSA:1.10.760.10 59 136 2.0E-33 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_00200 4c5d8632664967d43009b7baa775eafd 137 SUPERFAMILY SSF46626 60 134 8.33E-19 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_00200 4c5d8632664967d43009b7baa775eafd 137 PRINTS PR00607 Class IE cytochrome C signature 80 90 3.8E-14 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 DA442_00200 4c5d8632664967d43009b7baa775eafd 137 PRINTS PR00607 Class IE cytochrome C signature 123 134 3.8E-14 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 DA442_00200 4c5d8632664967d43009b7baa775eafd 137 PRINTS PR00607 Class IE cytochrome C signature 69 80 3.8E-14 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 DA442_00200 4c5d8632664967d43009b7baa775eafd 137 PRINTS PR00607 Class IE cytochrome C signature 108 120 3.8E-14 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 DA442_00200 4c5d8632664967d43009b7baa775eafd 137 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 59 133 2.2E-15 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_24930 b26b647aac3f396c155d58a8a88abd39 505 SMART SM00155 399 426 2.2E-5 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 DA442_24930 b26b647aac3f396c155d58a8a88abd39 505 SMART SM00155 165 192 0.027 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 DA442_24930 b26b647aac3f396c155d58a8a88abd39 505 Pfam PF13091 PLD-like domain 310 447 1.9E-25 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 DA442_24930 b26b647aac3f396c155d58a8a88abd39 505 Pfam PF13091 PLD-like domain 78 224 4.1E-17 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 DA442_24930 b26b647aac3f396c155d58a8a88abd39 505 SUPERFAMILY SSF56024 278 460 5.1E-37 T 14-10-2018 DA442_24930 b26b647aac3f396c155d58a8a88abd39 505 SUPERFAMILY SSF56024 37 236 7.4E-39 T 14-10-2018 DA442_24930 b26b647aac3f396c155d58a8a88abd39 505 Gene3D G3DSA:3.30.870.10 56 256 2.6E-36 T 14-10-2018 DA442_24930 b26b647aac3f396c155d58a8a88abd39 505 Gene3D G3DSA:3.30.870.10 288 469 2.8E-41 T 14-10-2018 DA442_12560 902292351d811186df8e8de1193d7599 339 PIRSF PIRSF026343 4 339 7.3E-122 T 14-10-2018 IPR014524 Outer membrane protein assembly factor BamC DA442_12560 902292351d811186df8e8de1193d7599 339 Pfam PF06804 NlpB/DapX lipoprotein 35 336 1.3E-106 T 14-10-2018 IPR010653 NlpB/DapX lipoprotein DA442_12560 902292351d811186df8e8de1193d7599 339 Gene3D G3DSA:3.30.310.170 221 339 1.4E-42 T 14-10-2018 DA442_12560 902292351d811186df8e8de1193d7599 339 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 4 338 34.469 T 14-10-2018 IPR014524 Outer membrane protein assembly factor BamC DA442_12560 902292351d811186df8e8de1193d7599 339 Gene3D G3DSA:3.30.530.50 97 207 1.0E-12 T 14-10-2018 DA442_11395 46d0f77535e371ff529efccf5aef8627 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DA442_11395 46d0f77535e371ff529efccf5aef8627 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 3.1E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_11395 46d0f77535e371ff529efccf5aef8627 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 3.1E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_11395 46d0f77535e371ff529efccf5aef8627 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 3.1E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_11395 46d0f77535e371ff529efccf5aef8627 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 3.1E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_11395 46d0f77535e371ff529efccf5aef8627 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 3.1E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_11395 46d0f77535e371ff529efccf5aef8627 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 178 0.007 T 14-10-2018 DA442_11395 46d0f77535e371ff529efccf5aef8627 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 5.1E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_11395 46d0f77535e371ff529efccf5aef8627 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 5.1E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_11395 46d0f77535e371ff529efccf5aef8627 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 5.1E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_11395 46d0f77535e371ff529efccf5aef8627 248 Pfam PF00106 short chain dehydrogenase 13 208 9.7E-54 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_11395 46d0f77535e371ff529efccf5aef8627 248 SUPERFAMILY SSF51735 9 242 2.1E-64 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_11395 46d0f77535e371ff529efccf5aef8627 248 Gene3D G3DSA:3.40.50.720 1 246 3.6E-71 T 14-10-2018 DA442_01660 e1f1ca7320650ee84c5d116e892012fc 66 Gene3D G3DSA:3.30.1910.10 2 65 4.0E-19 T 14-10-2018 DA442_01660 e1f1ca7320650ee84c5d116e892012fc 66 Pfam PF06526 Protein of unknown function (DUF1107) 2 64 3.0E-26 T 14-10-2018 IPR009491 Protein of unknown function DUF1107 DA442_01660 e1f1ca7320650ee84c5d116e892012fc 66 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 65 2.0E-30 T 14-10-2018 IPR009491 Protein of unknown function DUF1107 DA442_24975 35753d39662e2440fe263470ac197a63 339 SUPERFAMILY SSF52540 4 240 7.1E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_24975 35753d39662e2440fe263470ac197a63 339 Pfam PF08402 TOBE domain 257 330 3.6E-5 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 DA442_24975 35753d39662e2440fe263470ac197a63 339 SUPERFAMILY SSF50331 250 334 7.37E-6 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DA442_24975 35753d39662e2440fe263470ac197a63 339 SMART SM00382 28 211 2.0E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_24975 35753d39662e2440fe263470ac197a63 339 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_24975 35753d39662e2440fe263470ac197a63 339 Pfam PF00005 ABC transporter 20 161 8.5E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_24975 35753d39662e2440fe263470ac197a63 339 Gene3D G3DSA:3.40.50.300 1 237 4.7E-80 T 14-10-2018 DA442_21580 7c4b7eb0be3f9aacde0e44f7a4b30e9c 150 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 23 147 8.2E-26 T 14-10-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 DA442_21580 7c4b7eb0be3f9aacde0e44f7a4b30e9c 150 ProSitePatterns PS00196 Type-1 copper (blue) proteins signature. 127 144 - T 14-10-2018 IPR028871 Blue (type 1) copper protein, binding site DA442_21580 7c4b7eb0be3f9aacde0e44f7a4b30e9c 150 TIGRFAM TIGR02695 azurin: azurin 25 149 6.6E-63 T 14-10-2018 IPR014068 Azurin DA442_21580 7c4b7eb0be3f9aacde0e44f7a4b30e9c 150 Gene3D G3DSA:2.60.40.420 23 149 6.2E-46 T 14-10-2018 IPR008972 Cupredoxin DA442_21580 7c4b7eb0be3f9aacde0e44f7a4b30e9c 150 SUPERFAMILY SSF49503 23 147 1.83E-46 T 14-10-2018 IPR008972 Cupredoxin DA442_21580 7c4b7eb0be3f9aacde0e44f7a4b30e9c 150 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 27 149 3.0E-69 T 14-10-2018 DA442_13700 2e38112a3f034cbcb85b3e07bd34bb18 716 SMART SM00471 91 259 0.0033 T 14-10-2018 IPR003607 HD/PDEase domain DA442_13700 2e38112a3f034cbcb85b3e07bd34bb18 716 Gene3D G3DSA:1.10.3210.40 33 262 2.6E-25 T 14-10-2018 DA442_13700 2e38112a3f034cbcb85b3e07bd34bb18 716 Pfam PF07514 Putative helicase 32 353 1.5E-121 T 14-10-2018 IPR011119 Uncharacterised domain, helicase/relaxase, putative DA442_13700 2e38112a3f034cbcb85b3e07bd34bb18 716 SUPERFAMILY SSF109604 96 252 3.84E-7 T 14-10-2018 DA442_17275 859efdccaca334f31845ce4d73ebf758 87 Gene3D G3DSA:3.30.160.140 1 87 2.2E-32 T 14-10-2018 IPR036692 Shew3726-like superfamily DA442_17275 859efdccaca334f31845ce4d73ebf758 87 SUPERFAMILY SSF160272 1 86 2.09E-29 T 14-10-2018 IPR036692 Shew3726-like superfamily DA442_17275 859efdccaca334f31845ce4d73ebf758 87 Pfam PF07369 Protein of unknown function (DUF1488) 5 85 4.4E-26 T 14-10-2018 IPR009962 Protein of unknown function DUF1488 DA442_07530 b856d9591d0c6ee8823a16365a325126 172 Gene3D G3DSA:2.30.110.20 2 172 8.2E-62 T 14-10-2018 IPR036624 Hcp1-like superfamily DA442_07530 b856d9591d0c6ee8823a16365a325126 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 1.9E-64 T 14-10-2018 IPR008514 Type VI secretion system effector, Hcp DA442_07530 b856d9591d0c6ee8823a16365a325126 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 5.8E-29 T 14-10-2018 IPR008514 Type VI secretion system effector, Hcp DA442_07530 b856d9591d0c6ee8823a16365a325126 172 SUPERFAMILY SSF141452 3 168 2.22E-38 T 14-10-2018 IPR036624 Hcp1-like superfamily DA442_13635 d78c6917124ed9d805199355da29c26c 88 Gene3D G3DSA:1.20.5.780 1 85 9.6E-9 T 14-10-2018 DA442_13635 d78c6917124ed9d805199355da29c26c 88 Pfam PF08681 Protein of unknown function (DUF1778) 8 83 3.5E-13 T 14-10-2018 IPR014795 Vibrio phage ICP1, Orf50 DA442_13635 d78c6917124ed9d805199355da29c26c 88 SUPERFAMILY SSF47598 4 81 1.09E-12 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 DA442_08485 82f2bd4c3b74be49e813fa18762fc309 249 Pfam PF00005 ABC transporter 24 172 9.3E-39 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_08485 82f2bd4c3b74be49e813fa18762fc309 249 PIRSF PIRSF039085 5 248 9.8E-111 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 DA442_08485 82f2bd4c3b74be49e813fa18762fc309 249 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_08485 82f2bd4c3b74be49e813fa18762fc309 249 SMART SM00382 33 220 1.3E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_08485 82f2bd4c3b74be49e813fa18762fc309 249 SUPERFAMILY SSF52540 8 242 5.83E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_08485 82f2bd4c3b74be49e813fa18762fc309 249 Gene3D G3DSA:3.40.50.300 6 249 1.5E-79 T 14-10-2018 DA442_17490 db2470a72f9ae4c0f613fc2abc1c8de6 270 ProSitePatterns PS00449 ATP synthase a subunit signature. 203 212 - T 14-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_17490 db2470a72f9ae4c0f613fc2abc1c8de6 270 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 35 263 1.1E-45 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_17490 db2470a72f9ae4c0f613fc2abc1c8de6 270 Pfam PF00119 ATP synthase A chain 44 262 8.3E-58 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_17490 db2470a72f9ae4c0f613fc2abc1c8de6 270 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 268 15.223 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_17490 db2470a72f9ae4c0f613fc2abc1c8de6 270 SUPERFAMILY SSF81336 93 262 9.55E-50 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_17490 db2470a72f9ae4c0f613fc2abc1c8de6 270 Gene3D G3DSA:1.20.120.220 92 268 2.6E-66 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_17490 db2470a72f9ae4c0f613fc2abc1c8de6 270 PRINTS PR00123 ATP synthase A subunit signature 200 222 2.3E-13 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_17490 db2470a72f9ae4c0f613fc2abc1c8de6 270 PRINTS PR00123 ATP synthase A subunit signature 101 117 2.3E-13 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_17490 db2470a72f9ae4c0f613fc2abc1c8de6 270 PRINTS PR00123 ATP synthase A subunit signature 248 263 2.3E-13 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_01515 fa2b6ea283a1d2ae93ee95c140b5adcb 58 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 9.1E-27 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01515 fa2b6ea283a1d2ae93ee95c140b5adcb 58 PIRSF PIRSF002211 1 58 1.3E-28 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01515 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 22.06 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01515 fa2b6ea283a1d2ae93ee95c140b5adcb 58 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 14-10-2018 IPR018038 Ribosomal protein L30, conserved site DA442_01515 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Gene3D G3DSA:3.30.1390.20 1 58 3.6E-28 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily DA442_01515 fa2b6ea283a1d2ae93ee95c140b5adcb 58 SUPERFAMILY SSF55129 1 58 1.83E-23 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily DA442_01515 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 2.6E-21 T 14-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain DA442_08610 a9cd08b7c93b668e74061819ecd78a8f 398 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 9 397 4.3E-236 T 14-10-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 DA442_08610 a9cd08b7c93b668e74061819ecd78a8f 398 Pfam PF04303 PrpF protein 11 393 8.8E-176 T 14-10-2018 IPR007400 PrpF protein DA442_08610 a9cd08b7c93b668e74061819ecd78a8f 398 SUPERFAMILY SSF54506 8 187 6.59E-72 T 14-10-2018 DA442_08610 a9cd08b7c93b668e74061819ecd78a8f 398 Gene3D G3DSA:3.10.310.10 16 390 1.7E-149 T 14-10-2018 DA442_08610 a9cd08b7c93b668e74061819ecd78a8f 398 SUPERFAMILY SSF54506 191 396 3.3E-75 T 14-10-2018 DA442_08610 a9cd08b7c93b668e74061819ecd78a8f 398 Gene3D G3DSA:3.10.310.10 186 376 1.7E-149 T 14-10-2018 DA442_21515 b86fa2e90024e10caced4ab104ffde3b 199 Pfam PF16925 Bacterial transcriptional repressor C-terminal 83 186 4.0E-7 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal DA442_21515 b86fa2e90024e10caced4ab104ffde3b 199 SUPERFAMILY SSF48498 82 193 1.24E-20 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DA442_21515 b86fa2e90024e10caced4ab104ffde3b 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.2E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DA442_21515 b86fa2e90024e10caced4ab104ffde3b 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.2E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DA442_21515 b86fa2e90024e10caced4ab104ffde3b 199 SUPERFAMILY SSF46689 2 73 7.18E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_21515 b86fa2e90024e10caced4ab104ffde3b 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 2.9E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DA442_21515 b86fa2e90024e10caced4ab104ffde3b 199 Gene3D G3DSA:1.10.357.10 1 194 2.7E-59 T 14-10-2018 DA442_12585 652bd6ab7cf018a6576df259e3318a4a 81 Pfam PF01206 Sulfurtransferase TusA 6 75 1.7E-8 T 14-10-2018 IPR001455 TusA-like domain DA442_12585 652bd6ab7cf018a6576df259e3318a4a 81 Gene3D G3DSA:3.30.110.40 1 77 4.1E-5 T 14-10-2018 IPR036868 TusA-like domain superfamily DA442_12585 652bd6ab7cf018a6576df259e3318a4a 81 SUPERFAMILY SSF64307 4 72 3.4E-7 T 14-10-2018 IPR036868 TusA-like domain superfamily DA442_21670 6535ed1e3b10b031a6703d5d8581d2d4 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 174 190 4.8E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_21670 6535ed1e3b10b031a6703d5d8581d2d4 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 174 4.8E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_21670 6535ed1e3b10b031a6703d5d8581d2d4 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 190 202 4.8E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_21670 6535ed1e3b10b031a6703d5d8581d2d4 218 Gene3D G3DSA:3.40.50.2300 11 148 8.8E-26 T 14-10-2018 DA442_21670 6535ed1e3b10b031a6703d5d8581d2d4 218 SUPERFAMILY SSF46894 153 216 6.12E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DA442_21670 6535ed1e3b10b031a6703d5d8581d2d4 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 159 214 6.2E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_21670 6535ed1e3b10b031a6703d5d8581d2d4 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 174 201 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_21670 6535ed1e3b10b031a6703d5d8581d2d4 218 SMART SM00421 157 214 3.5E-24 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_21670 6535ed1e3b10b031a6703d5d8581d2d4 218 Gene3D G3DSA:1.10.10.10 150 218 1.1E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_05250 bf8ecca6cd0f80976c6fa9b9f5b2f656 54 Pfam PF10689 Protein of unknown function (DUF2496) 8 50 1.7E-23 T 14-10-2018 IPR019630 Protein of unknown function DUF2496, YbaM-related DA442_11730 53509bd9a73bc27cdee4608f3c793a5f 329 Pfam PF06463 Molybdenum Cofactor Synthesis C 186 312 5.1E-39 T 14-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DA442_11730 53509bd9a73bc27cdee4608f3c793a5f 329 SMART SM00729 14 214 6.7E-5 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DA442_11730 53509bd9a73bc27cdee4608f3c793a5f 329 Pfam PF04055 Radical SAM superfamily 19 181 9.9E-27 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DA442_11730 53509bd9a73bc27cdee4608f3c793a5f 329 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 5 329 36.888 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DA442_11730 53509bd9a73bc27cdee4608f3c793a5f 329 Pfam PF13353 4Fe-4S single cluster domain 23 125 1.1E-8 T 14-10-2018 DA442_11730 53509bd9a73bc27cdee4608f3c793a5f 329 Gene3D G3DSA:3.20.20.70 2 329 2.0E-82 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_11730 53509bd9a73bc27cdee4608f3c793a5f 329 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 6 329 1.1E-104 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DA442_11730 53509bd9a73bc27cdee4608f3c793a5f 329 SUPERFAMILY SSF102114 6 289 3.01E-70 T 14-10-2018 DA442_00605 b837abefd564236271724f1b6a2cf0a6 334 Hamap MF_00540 Adenosine deaminase [add]. 1 331 55.034 T 14-10-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 DA442_00605 b837abefd564236271724f1b6a2cf0a6 334 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 330 6.8E-123 T 14-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 DA442_00605 b837abefd564236271724f1b6a2cf0a6 334 Gene3D G3DSA:3.20.20.140 1 334 7.0E-98 T 14-10-2018 DA442_00605 b837abefd564236271724f1b6a2cf0a6 334 Pfam PF00962 Adenosine/AMP deaminase 5 328 1.6E-90 T 14-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 DA442_00605 b837abefd564236271724f1b6a2cf0a6 334 SUPERFAMILY SSF51556 3 325 3.74E-76 T 14-10-2018 IPR032466 Metal-dependent hydrolase DA442_07425 6773616f7844fec4936a6cd8689d92b0 200 PIRSF PIRSF000709 1 190 2.6E-15 T 14-10-2018 DA442_07425 6773616f7844fec4936a6cd8689d92b0 200 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 7 16 - T 14-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 DA442_07425 6773616f7844fec4936a6cd8689d92b0 200 Gene3D G3DSA:3.40.50.1240 1 192 1.4E-44 T 14-10-2018 IPR029033 Histidine phosphatase superfamily DA442_07425 6773616f7844fec4936a6cd8689d92b0 200 SUPERFAMILY SSF53254 1 185 2.62E-46 T 14-10-2018 IPR029033 Histidine phosphatase superfamily DA442_07425 6773616f7844fec4936a6cd8689d92b0 200 SMART SM00855 4 158 2.8E-19 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DA442_07425 6773616f7844fec4936a6cd8689d92b0 200 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 179 1.2E-37 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DA442_05090 930b3775cda48639fb20637e07c180ad 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 1.0E-12 T 14-10-2018 DA442_05090 930b3775cda48639fb20637e07c180ad 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 1.0E-12 T 14-10-2018 DA442_05090 930b3775cda48639fb20637e07c180ad 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 167 185 1.0E-12 T 14-10-2018 DA442_05090 930b3775cda48639fb20637e07c180ad 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.0E-12 T 14-10-2018 DA442_05090 930b3775cda48639fb20637e07c180ad 429 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 333 1.0E-61 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DA442_05090 930b3775cda48639fb20637e07c180ad 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 4.2E-7 T 14-10-2018 DA442_05090 930b3775cda48639fb20637e07c180ad 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 167 192 4.2E-7 T 14-10-2018 DA442_05090 930b3775cda48639fb20637e07c180ad 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 4.2E-7 T 14-10-2018 DA442_05090 930b3775cda48639fb20637e07c180ad 429 SUPERFAMILY SSF51905 3 347 4.58E-28 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_05090 930b3775cda48639fb20637e07c180ad 429 Gene3D G3DSA:3.50.50.100 1 409 9.8E-114 T 14-10-2018 DA442_02125 67870558515bdfaa143ae67cd5568012 160 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 129 2.1E-24 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 DA442_02125 67870558515bdfaa143ae67cd5568012 160 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 129 2.0E-28 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 DA442_02125 67870558515bdfaa143ae67cd5568012 160 Gene3D G3DSA:3.30.70.560 1 153 8.1E-33 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 DA442_02125 67870558515bdfaa143ae67cd5568012 160 SUPERFAMILY SSF55083 1 148 9.94E-38 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 DA442_05800 e6e058b88947a9aa5a25de21b4a32de6 456 Gene3D G3DSA:1.10.275.10 1 117 8.1E-50 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal DA442_05800 e6e058b88947a9aa5a25de21b4a32de6 456 Gene3D G3DSA:1.20.200.10 118 447 1.1E-158 T 14-10-2018 DA442_05800 e6e058b88947a9aa5a25de21b4a32de6 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 456 9.6E-151 T 14-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DA442_05800 e6e058b88947a9aa5a25de21b4a32de6 456 ProSitePatterns PS00163 Fumarate lyases signature. 295 304 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 DA442_05800 e6e058b88947a9aa5a25de21b4a32de6 456 SUPERFAMILY SSF48557 4 448 1.12E-108 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 DA442_05800 e6e058b88947a9aa5a25de21b4a32de6 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 332 446 3.7E-52 T 14-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 DA442_05800 e6e058b88947a9aa5a25de21b4a32de6 456 Pfam PF00206 Lyase 14 313 4.3E-75 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal DA442_05800 e6e058b88947a9aa5a25de21b4a32de6 456 Gene3D G3DSA:1.10.40.30 383 446 1.1E-158 T 14-10-2018 DA442_05800 e6e058b88947a9aa5a25de21b4a32de6 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 5.9E-18 T 14-10-2018 IPR000362 Fumarate lyase family DA442_05800 e6e058b88947a9aa5a25de21b4a32de6 456 PRINTS PR00149 Fumarate lyase superfamily signature 252 279 5.9E-18 T 14-10-2018 IPR000362 Fumarate lyase family DA442_05800 e6e058b88947a9aa5a25de21b4a32de6 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 5.9E-18 T 14-10-2018 IPR000362 Fumarate lyase family DA442_05800 e6e058b88947a9aa5a25de21b4a32de6 456 PRINTS PR00149 Fumarate lyase superfamily signature 295 311 5.9E-18 T 14-10-2018 IPR000362 Fumarate lyase family DA442_23660 06d56fcca21d38c0dcb76c3f2049132e 216 Gene3D G3DSA:2.160.20.80 3 216 1.2E-56 T 14-10-2018 DA442_23660 06d56fcca21d38c0dcb76c3f2049132e 216 SUPERFAMILY SSF141571 6 50 6.28E-9 T 14-10-2018 DA442_23660 06d56fcca21d38c0dcb76c3f2049132e 216 SUPERFAMILY SSF141571 53 215 3.43E-36 T 14-10-2018 DA442_23660 06d56fcca21d38c0dcb76c3f2049132e 216 Pfam PF00805 Pentapeptide repeats (8 copies) 54 74 0.0092 T 14-10-2018 IPR001646 Pentapeptide repeat DA442_23660 06d56fcca21d38c0dcb76c3f2049132e 216 Pfam PF00805 Pentapeptide repeats (8 copies) 17 48 4.7E-6 T 14-10-2018 IPR001646 Pentapeptide repeat DA442_23660 06d56fcca21d38c0dcb76c3f2049132e 216 Pfam PF00805 Pentapeptide repeats (8 copies) 79 105 5.2E-5 T 14-10-2018 IPR001646 Pentapeptide repeat DA442_23660 06d56fcca21d38c0dcb76c3f2049132e 216 Pfam PF13599 Pentapeptide repeats (9 copies) 113 166 3.5E-9 T 14-10-2018 IPR001646 Pentapeptide repeat DA442_21885 7fec06d78ad5ef1310722249a2145b9b 91 SUPERFAMILY SSF55729 1 90 1.92E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_21885 7fec06d78ad5ef1310722249a2145b9b 91 Pfam PF14542 GCN5-related N-acetyl-transferase 16 88 1.6E-21 T 14-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase DA442_21885 7fec06d78ad5ef1310722249a2145b9b 91 Gene3D G3DSA:3.40.630.30 1 91 7.7E-22 T 14-10-2018 DA442_23880 2e5e0881b586f5c55c02814ee6709b99 199 Gene3D G3DSA:3.40.1280.10 1 199 2.8E-59 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DA442_23880 2e5e0881b586f5c55c02814ee6709b99 199 Pfam PF04013 Putative SAM-dependent RNA methyltransferase 1 198 1.1E-66 T 14-10-2018 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY GO:0008175 DA442_23880 2e5e0881b586f5c55c02814ee6709b99 199 SUPERFAMILY SSF75217 1 198 1.7E-67 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases DA442_23880 2e5e0881b586f5c55c02814ee6709b99 199 Hamap MF_00587 tRNA (pseudouridine(54)-N(1))-methyltransferase [trmY]. 1 198 28.126 T 14-10-2018 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY GO:0008175 DA442_10180 b1533e078beb8fe6dd72b6e3a3322bc1 148 Gene3D G3DSA:3.40.630.30 1 147 4.3E-17 T 14-10-2018 DA442_10180 b1533e078beb8fe6dd72b6e3a3322bc1 148 Pfam PF13673 Acetyltransferase (GNAT) domain 27 145 1.7E-25 T 14-10-2018 IPR000182 GNAT domain DA442_10180 b1533e078beb8fe6dd72b6e3a3322bc1 148 SUPERFAMILY SSF55729 2 143 3.49E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_18975 556ad70e758186b1f58325780e9bf642 272 Gene3D G3DSA:3.40.190.10 32 249 8.8E-62 T 14-10-2018 DA442_18975 556ad70e758186b1f58325780e9bf642 272 SUPERFAMILY SSF53850 7 259 5.98E-58 T 14-10-2018 DA442_18975 556ad70e758186b1f58325780e9bf642 272 SMART SM00062 39 262 3.2E-45 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DA442_18975 556ad70e758186b1f58325780e9bf642 272 Gene3D G3DSA:3.40.190.10 125 216 8.8E-62 T 14-10-2018 DA442_18975 556ad70e758186b1f58325780e9bf642 272 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 260 3.6E-51 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DA442_18975 556ad70e758186b1f58325780e9bf642 272 SMART SM00079 39 261 0.0029 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 DA442_03000 62fb5b56cf00aeb875f12485fcc478ef 247 SUPERFAMILY SSF110395 4 247 8.63E-74 T 14-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 DA442_03000 62fb5b56cf00aeb875f12485fcc478ef 247 Pfam PF03932 CutC family 4 205 2.1E-83 T 14-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 DA442_03000 62fb5b56cf00aeb875f12485fcc478ef 247 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 3 207 30.463 T 14-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 DA442_03000 62fb5b56cf00aeb875f12485fcc478ef 247 Gene3D G3DSA:3.20.20.380 3 247 1.2E-86 T 14-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 DA442_24805 69a429cf50a0813197193b5a32eb40b7 294 Gene3D G3DSA:3.40.190.10 100 289 1.4E-34 T 14-10-2018 DA442_24805 69a429cf50a0813197193b5a32eb40b7 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 3.0E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_24805 69a429cf50a0813197193b5a32eb40b7 294 SUPERFAMILY SSF53850 88 293 7.42E-24 T 14-10-2018 DA442_24805 69a429cf50a0813197193b5a32eb40b7 294 SUPERFAMILY SSF46785 2 82 4.87E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_24805 69a429cf50a0813197193b5a32eb40b7 294 Gene3D G3DSA:1.10.10.10 5 94 1.2E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_24805 69a429cf50a0813197193b5a32eb40b7 294 Pfam PF03466 LysR substrate binding domain 87 293 8.7E-21 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_24805 69a429cf50a0813197193b5a32eb40b7 294 Gene3D G3DSA:3.40.190.10 159 262 1.4E-34 T 14-10-2018 DA442_24805 69a429cf50a0813197193b5a32eb40b7 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 6.1E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_24805 69a429cf50a0813197193b5a32eb40b7 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 6.1E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_24805 69a429cf50a0813197193b5a32eb40b7 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 6.1E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_21125 0b7dd89f2fb7393fcd6879535f650a41 407 Gene3D G3DSA:1.10.287.470 188 248 9.1E-18 T 14-10-2018 DA442_21125 0b7dd89f2fb7393fcd6879535f650a41 407 Gene3D G3DSA:2.40.50.100 71 99 3.3E-11 T 14-10-2018 DA442_21125 0b7dd89f2fb7393fcd6879535f650a41 407 Gene3D G3DSA:2.40.30.170 282 330 9.1E-18 T 14-10-2018 DA442_21125 0b7dd89f2fb7393fcd6879535f650a41 407 Pfam PF13533 Biotin-lipoyl like 72 110 1.0E-10 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain DA442_21125 0b7dd89f2fb7393fcd6879535f650a41 407 SUPERFAMILY SSF111369 198 292 1.31E-7 T 14-10-2018 DA442_21125 0b7dd89f2fb7393fcd6879535f650a41 407 SUPERFAMILY SSF111369 63 156 9.15E-8 T 14-10-2018 DA442_21125 0b7dd89f2fb7393fcd6879535f650a41 407 Gene3D G3DSA:1.10.287.470 100 164 3.3E-11 T 14-10-2018 DA442_21125 0b7dd89f2fb7393fcd6879535f650a41 407 Gene3D G3DSA:2.40.50.100 249 281 9.1E-18 T 14-10-2018 DA442_14610 081b903c439fd811cb2d87f0f4204bea 170 Pfam PF04073 Aminoacyl-tRNA editing domain 40 160 6.5E-32 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 DA442_14610 081b903c439fd811cb2d87f0f4204bea 170 Gene3D G3DSA:3.90.960.10 14 170 1.1E-42 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DA442_14610 081b903c439fd811cb2d87f0f4204bea 170 SUPERFAMILY SSF55826 18 169 4.71E-39 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DA442_24325 7fca4694a93c9f8481327c8c4e3020f2 183 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 24 182 2.3E-75 T 14-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ DA442_24325 7fca4694a93c9f8481327c8c4e3020f2 183 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 182 8.9E-80 T 14-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ DA442_01395 c73ecdc733c6e9a2ace716d0b22734c9 181 Pfam PF05036 Sporulation related domain 107 176 3.3E-14 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 DA442_01395 c73ecdc733c6e9a2ace716d0b22734c9 181 Gene3D G3DSA:3.30.70.1070 101 179 4.2E-28 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 DA442_01395 c73ecdc733c6e9a2ace716d0b22734c9 181 SUPERFAMILY SSF110997 106 177 3.4E-17 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 DA442_01395 c73ecdc733c6e9a2ace716d0b22734c9 181 TIGRFAM TIGR02223 ftsN: cell division protein FtsN 100 178 7.5E-33 T 14-10-2018 IPR011930 Cell division protein FtsN GO:0005515 DA442_25235 b5b7300f3ce6d358eef2344830951de1 390 Pfam PF14321 Domain of unknown function (DUF4382) 76 254 9.2E-22 T 14-10-2018 IPR025491 Domain of unknown function DUF4382 DA442_24000 a9dff0faea80bb55d3e16bd6d4018a5f 390 Gene3D G3DSA:1.25.40.10 27 170 2.9E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_24000 a9dff0faea80bb55d3e16bd6d4018a5f 390 Gene3D G3DSA:1.25.40.10 175 388 2.8E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_24000 a9dff0faea80bb55d3e16bd6d4018a5f 390 SUPERFAMILY SSF48452 237 378 4.64E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_24000 a9dff0faea80bb55d3e16bd6d4018a5f 390 Pfam PF14559 Tetratricopeptide repeat 315 369 1.0E-5 T 14-10-2018 DA442_24000 a9dff0faea80bb55d3e16bd6d4018a5f 390 SMART SM00028 336 369 25.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_24000 a9dff0faea80bb55d3e16bd6d4018a5f 390 SMART SM00028 100 133 22.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_24000 a9dff0faea80bb55d3e16bd6d4018a5f 390 SMART SM00028 274 307 50.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_24000 a9dff0faea80bb55d3e16bd6d4018a5f 390 SUPERFAMILY SSF48452 33 231 4.43E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_06315 550d5c37054ae0560090534c714e4ebc 400 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 80 2.5E-37 T 14-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DA442_06315 550d5c37054ae0560090534c714e4ebc 400 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 395 57.589 T 14-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DA442_06315 550d5c37054ae0560090534c714e4ebc 400 Pfam PF07055 Enoyl reductase FAD binding domain 326 389 2.4E-31 T 14-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DA442_06315 550d5c37054ae0560090534c714e4ebc 400 Gene3D G3DSA:3.40.50.720 1 399 6.3E-182 T 14-10-2018 DA442_06315 550d5c37054ae0560090534c714e4ebc 400 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 6.3E-113 T 14-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DA442_12955 de7d45fe4234ce1eb59a07471e45a415 261 PIRSF PIRSF009437 1 261 3.2E-103 T 14-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 DA442_12955 de7d45fe4234ce1eb59a07471e45a415 261 SMART SM00900 148 246 4.1E-31 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 DA442_12955 de7d45fe4234ce1eb59a07471e45a415 261 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 6 258 35.412 T 14-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 DA442_12955 de7d45fe4234ce1eb59a07471e45a415 261 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 5 254 4.4E-96 T 14-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 DA442_12955 de7d45fe4234ce1eb59a07471e45a415 261 Pfam PF04205 FMN-binding domain 148 243 6.4E-14 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 DA442_11575 76e376dd10a02bc0bda6b704983ea9f4 201 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 32 201 3.2E-56 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 DA442_11575 76e376dd10a02bc0bda6b704983ea9f4 201 PIRSF PIRSF015617 6 201 2.8E-63 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 DA442_11575 76e376dd10a02bc0bda6b704983ea9f4 201 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 29 201 1.0E-66 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 DA442_11575 76e376dd10a02bc0bda6b704983ea9f4 201 SUPERFAMILY SSF52540 12 201 3.01E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_11575 76e376dd10a02bc0bda6b704983ea9f4 201 Gene3D G3DSA:3.40.50.300 11 201 5.4E-68 T 14-10-2018 DA442_11575 76e376dd10a02bc0bda6b704983ea9f4 201 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 5 26 5.9E-7 T 14-10-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17 DA442_23040 d54c4ab3b59e5452780503b81e247d2b 79 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 73 3.6E-19 T 14-10-2018 IPR000504 RNA recognition motif domain GO:0003676 DA442_23040 d54c4ab3b59e5452780503b81e247d2b 79 SMART SM00360 2 75 2.6E-21 T 14-10-2018 IPR000504 RNA recognition motif domain GO:0003676 DA442_23040 d54c4ab3b59e5452780503b81e247d2b 79 Gene3D G3DSA:3.30.70.330 1 79 2.0E-23 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily DA442_23040 d54c4ab3b59e5452780503b81e247d2b 79 SUPERFAMILY SSF54928 2 78 9.81E-24 T 14-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 DA442_14905 d8694327914af20f2065485d8d1629af 477 Gene3D G3DSA:3.40.605.10 16 466 5.5E-167 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DA442_14905 d8694327914af20f2065485d8d1629af 477 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 277 288 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DA442_14905 d8694327914af20f2065485d8d1629af 477 SUPERFAMILY SSF53720 15 474 5.24E-153 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DA442_14905 d8694327914af20f2065485d8d1629af 477 PIRSF PIRSF036492 8 474 7.1E-84 T 14-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 DA442_14905 d8694327914af20f2065485d8d1629af 477 Pfam PF00171 Aldehyde dehydrogenase family 22 470 1.6E-158 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DA442_14905 d8694327914af20f2065485d8d1629af 477 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 249 256 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DA442_14905 d8694327914af20f2065485d8d1629af 477 Gene3D G3DSA:3.40.309.10 256 443 5.5E-167 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DA442_23765 853518a58317c037ddc9492625b38d7d 378 Pfam PF02595 Glycerate kinase family 3 374 5.9E-147 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 DA442_23765 853518a58317c037ddc9492625b38d7d 378 PIRSF PIRSF006078 1 377 1.3E-133 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 DA442_23765 853518a58317c037ddc9492625b38d7d 378 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 5.6E-157 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 DA442_23765 853518a58317c037ddc9492625b38d7d 378 SUPERFAMILY SSF110738 1 376 7.19E-140 T 14-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 DA442_23765 853518a58317c037ddc9492625b38d7d 378 Gene3D G3DSA:3.40.50.10350 1 362 4.1E-139 T 14-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold DA442_23765 853518a58317c037ddc9492625b38d7d 378 Gene3D G3DSA:3.90.1510.10 42 276 4.1E-139 T 14-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 DA442_05295 3109353adb177334ae28df691baef6cb 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 8 101 28.073 T 14-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS DA442_05295 3109353adb177334ae28df691baef6cb 106 Gene3D G3DSA:3.30.1390.10 1 106 1.5E-46 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DA442_05295 3109353adb177334ae28df691baef6cb 106 SUPERFAMILY SSF54736 21 105 6.28E-33 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DA442_05295 3109353adb177334ae28df691baef6cb 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 24 102 2.3E-34 T 14-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 DA442_22740 f0b14e27900aa513b50dd2b563c0ca29 476 SMART SM00387 372 476 2.1E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_22740 f0b14e27900aa513b50dd2b563c0ca29 476 SUPERFAMILY SSF55874 336 475 2.77E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_22740 f0b14e27900aa513b50dd2b563c0ca29 476 Gene3D G3DSA:1.10.287.130 226 332 2.3E-14 T 14-10-2018 DA442_22740 f0b14e27900aa513b50dd2b563c0ca29 476 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 373 475 6.9E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_22740 f0b14e27900aa513b50dd2b563c0ca29 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 455 1.5E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_22740 f0b14e27900aa513b50dd2b563c0ca29 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 420 1.5E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_22740 f0b14e27900aa513b50dd2b563c0ca29 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 434 1.5E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_22740 f0b14e27900aa513b50dd2b563c0ca29 476 SUPERFAMILY SSF47384 259 311 1.18E-8 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DA442_22740 f0b14e27900aa513b50dd2b563c0ca29 476 Gene3D G3DSA:3.30.565.10 333 475 5.7E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_12725 aef38998b3834fbfee8bd4ac62752119 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 7.9E-49 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DA442_12725 aef38998b3834fbfee8bd4ac62752119 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 7.9E-49 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DA442_12725 aef38998b3834fbfee8bd4ac62752119 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 7.9E-49 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DA442_12725 aef38998b3834fbfee8bd4ac62752119 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 7.9E-49 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DA442_12725 aef38998b3834fbfee8bd4ac62752119 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 7.9E-49 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DA442_12725 aef38998b3834fbfee8bd4ac62752119 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 7.9E-49 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DA442_12725 aef38998b3834fbfee8bd4ac62752119 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 50.953 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DA442_12725 aef38998b3834fbfee8bd4ac62752119 319 SUPERFAMILY SSF52096 5 318 3.06E-106 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DA442_12725 aef38998b3834fbfee8bd4ac62752119 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 7.5E-165 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DA442_12725 aef38998b3834fbfee8bd4ac62752119 319 Gene3D G3DSA:3.90.226.10 4 319 1.2E-120 T 14-10-2018 DA442_12725 aef38998b3834fbfee8bd4ac62752119 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 6 151 9.1E-64 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DA442_19915 066667893d642e6f81b43f149df670c4 510 Pfam PF03606 C4-dicarboxylate anaerobic carrier 20 505 2.1E-138 T 14-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 DA442_04890 950e8447808fdad7d67603b1266a5a1a 196 Gene3D G3DSA:1.10.357.10 1 192 1.8E-40 T 14-10-2018 DA442_04890 950e8447808fdad7d67603b1266a5a1a 196 SUPERFAMILY SSF46689 4 77 5.82E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_04890 950e8447808fdad7d67603b1266a5a1a 196 SUPERFAMILY SSF48498 82 195 3.0E-19 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DA442_04890 950e8447808fdad7d67603b1266a5a1a 196 Pfam PF13305 WHG domain 93 172 2.8E-10 T 14-10-2018 IPR025996 WHG domain DA442_11120 d5fffe628b3a662bf30e324f5950660a 66 Pfam PF14056 Domain of unknown function (DUF4250) 10 61 1.5E-18 T 14-10-2018 IPR025346 Protein of unknown function DUF4250 DA442_05540 e11a98743c258bbc81a8be80ab3ff403 347 Gene3D G3DSA:1.10.287.70 20 101 3.1E-13 T 14-10-2018 DA442_05540 e11a98743c258bbc81a8be80ab3ff403 347 Gene3D G3DSA:3.40.50.720 112 233 3.6E-12 T 14-10-2018 DA442_05540 e11a98743c258bbc81a8be80ab3ff403 347 SUPERFAMILY SSF81324 8 138 5.36E-18 T 14-10-2018 DA442_05540 e11a98743c258bbc81a8be80ab3ff403 347 SUPERFAMILY SSF51735 121 240 6.4E-12 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_05540 e11a98743c258bbc81a8be80ab3ff403 347 Pfam PF07885 Ion channel 26 100 6.0E-15 T 14-10-2018 IPR013099 Potassium channel domain DA442_01070 f4d1d520d72d98734a275048b83159a1 351 Gene3D G3DSA:3.40.50.2000 4 155 4.6E-23 T 14-10-2018 DA442_01070 f4d1d520d72d98734a275048b83159a1 351 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 73 309 3.7E-52 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 DA442_01070 f4d1d520d72d98734a275048b83159a1 351 SUPERFAMILY SSF53756 9 343 1.35E-79 T 14-10-2018 DA442_01070 f4d1d520d72d98734a275048b83159a1 351 Gene3D G3DSA:3.40.50.2000 159 346 3.5E-37 T 14-10-2018 DA442_13990 94eca800acf5cabaeba11154ea09b51b 371 Gene3D G3DSA:2.40.420.20 289 356 5.7E-51 T 14-10-2018 DA442_13990 94eca800acf5cabaeba11154ea09b51b 371 SUPERFAMILY SSF111369 69 284 2.48E-32 T 14-10-2018 DA442_13990 94eca800acf5cabaeba11154ea09b51b 371 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 63 356 3.6E-49 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DA442_13990 94eca800acf5cabaeba11154ea09b51b 371 Gene3D G3DSA:1.10.287.470 115 174 5.7E-51 T 14-10-2018 DA442_13990 94eca800acf5cabaeba11154ea09b51b 371 Gene3D G3DSA:2.40.50.100 80 208 5.7E-51 T 14-10-2018 DA442_13990 94eca800acf5cabaeba11154ea09b51b 371 Gene3D G3DSA:2.40.30.170 68 288 5.7E-51 T 14-10-2018 DA442_13990 94eca800acf5cabaeba11154ea09b51b 371 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 67 273 6.6E-21 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DA442_00165 673ffdb725ba8376c9bdf41abdcfb8aa 494 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 9.8E-60 T 14-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DA442_00165 673ffdb725ba8376c9bdf41abdcfb8aa 494 SUPERFAMILY SSF51735 31 209 1.58E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_00165 673ffdb725ba8376c9bdf41abdcfb8aa 494 Gene3D G3DSA:1.10.1040.10 209 494 2.1E-121 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DA442_00165 673ffdb725ba8376c9bdf41abdcfb8aa 494 SUPERFAMILY SSF48179 210 341 5.95E-40 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DA442_00165 673ffdb725ba8376c9bdf41abdcfb8aa 494 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 367 2.6E-125 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DA442_00165 673ffdb725ba8376c9bdf41abdcfb8aa 494 Gene3D G3DSA:3.40.50.720 1 208 3.2E-86 T 14-10-2018 DA442_00165 673ffdb725ba8376c9bdf41abdcfb8aa 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 355 485 1.6E-16 T 14-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DA442_00165 673ffdb725ba8376c9bdf41abdcfb8aa 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 341 2.5E-26 T 14-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DA442_00165 673ffdb725ba8376c9bdf41abdcfb8aa 494 SUPERFAMILY SSF48179 348 487 3.4E-42 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DA442_00165 673ffdb725ba8376c9bdf41abdcfb8aa 494 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 22 488 36.908 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DA442_25375 af17961a2a16afefc7c50ecf6f6db7d9 176 PIRSF PIRSF004633 1 176 2.6E-76 T 14-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain DA442_25375 af17961a2a16afefc7c50ecf6f6db7d9 176 TIGRFAM TIGR04110 heme_HutZ: heme utilization protein HutZ 4 171 1.8E-89 T 14-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain DA442_25375 af17961a2a16afefc7c50ecf6f6db7d9 176 Gene3D G3DSA:2.30.110.10 12 176 4.1E-54 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 DA442_25375 af17961a2a16afefc7c50ecf6f6db7d9 176 SUPERFAMILY SSF50475 12 162 5.43E-35 T 14-10-2018 DA442_25375 af17961a2a16afefc7c50ecf6f6db7d9 176 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 15 105 7.7E-18 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DA442_13950 f019e7982d442aec08b0239f7a90b76f 98 Gene3D G3DSA:3.30.110.60 1 98 7.2E-37 T 14-10-2018 IPR035920 YhbY-like superfamily DA442_13950 f019e7982d442aec08b0239f7a90b76f 98 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 98 1.0E-44 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 DA442_13950 f019e7982d442aec08b0239f7a90b76f 98 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 6.3E-37 T 14-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 DA442_13950 f019e7982d442aec08b0239f7a90b76f 98 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 8.0E-21 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 DA442_13950 f019e7982d442aec08b0239f7a90b76f 98 SMART SM01103 3 86 1.3E-41 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 DA442_13950 f019e7982d442aec08b0239f7a90b76f 98 SUPERFAMILY SSF75471 1 94 5.89E-30 T 14-10-2018 IPR035920 YhbY-like superfamily DA442_03510 1a926a0fbd2bf512083fd7313bf34f61 321 Pfam PF00586 AIR synthase related protein, N-terminal domain 28 137 1.7E-20 T 14-10-2018 IPR016188 PurM-like, N-terminal domain DA442_03510 1a926a0fbd2bf512083fd7313bf34f61 321 Pfam PF02769 AIR synthase related protein, C-terminal domain 149 301 1.6E-9 T 14-10-2018 IPR010918 PurM-like, C-terminal domain DA442_03510 1a926a0fbd2bf512083fd7313bf34f61 321 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 2 320 26.769 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 DA442_03510 1a926a0fbd2bf512083fd7313bf34f61 321 SUPERFAMILY SSF56042 141 307 8.82E-34 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DA442_03510 1a926a0fbd2bf512083fd7313bf34f61 321 SUPERFAMILY SSF55326 3 137 4.71E-33 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DA442_03510 1a926a0fbd2bf512083fd7313bf34f61 321 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 320 9.4E-102 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 DA442_03510 1a926a0fbd2bf512083fd7313bf34f61 321 Gene3D G3DSA:3.30.1330.10 1 143 3.2E-41 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DA442_03510 1a926a0fbd2bf512083fd7313bf34f61 321 Gene3D G3DSA:3.90.650.10 144 320 3.0E-48 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DA442_03510 1a926a0fbd2bf512083fd7313bf34f61 321 PIRSF PIRSF005303 1 320 2.2E-81 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 DA442_14600 9f343ef5df2f2ccfeefb8aa7a3129226 86 Pfam PF03937 Flavinator of succinate dehydrogenase 7 77 2.0E-24 T 14-10-2018 IPR005631 Flavinator of succinate dehydrogenase DA442_14600 9f343ef5df2f2ccfeefb8aa7a3129226 86 Gene3D G3DSA:1.10.150.250 1 86 3.9E-37 T 14-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily DA442_14600 9f343ef5df2f2ccfeefb8aa7a3129226 86 SUPERFAMILY SSF109910 2 79 4.84E-26 T 14-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily DA442_08370 6dd8f6b761d0c67a8e6b9b9590f44b2a 1613 SUPERFAMILY SSF53223 754 940 1.53E-25 T 14-10-2018 DA442_08370 6dd8f6b761d0c67a8e6b9b9590f44b2a 1613 SUPERFAMILY SSF51735 945 1281 4.66E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_08370 6dd8f6b761d0c67a8e6b9b9590f44b2a 1613 PIRSF PIRSF036761 1 1610 0.0 T 14-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 DA442_08370 6dd8f6b761d0c67a8e6b9b9590f44b2a 1613 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 76 1602 0.0 T 14-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 DA442_07010 43e01dd06c3fe036c59edbef92492e2a 317 Pfam PF13730 Helix-turn-helix domain 15 66 9.6E-6 T 14-10-2018 DA442_17855 34c1511989dffbbad79988c66df8e77c 279 Gene3D G3DSA:3.40.800.10 69 218 3.4E-9 T 14-10-2018 DA442_17855 34c1511989dffbbad79988c66df8e77c 279 Pfam PF00491 Arginase family 133 214 1.5E-5 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 DA442_17855 34c1511989dffbbad79988c66df8e77c 279 SUPERFAMILY SSF52768 32 250 3.06E-22 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily DA442_02550 585a6e7b730b25048f5e0ba0972f6488 125 Gene3D G3DSA:3.20.70.20 47 125 1.5E-25 T 14-10-2018 DA442_02550 585a6e7b730b25048f5e0ba0972f6488 125 Pfam PF01228 Glycine radical 15 106 3.2E-23 T 14-10-2018 IPR001150 Glycine radical domain GO:0003824 DA442_02550 585a6e7b730b25048f5e0ba0972f6488 125 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 125 41.409 T 14-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA DA442_02550 585a6e7b730b25048f5e0ba0972f6488 125 PIRSF PIRSF000378 2 125 4.0E-54 T 14-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA DA442_02550 585a6e7b730b25048f5e0ba0972f6488 125 ProSitePatterns PS00850 Glycine radical domain signature. 95 103 - T 14-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site DA442_02550 585a6e7b730b25048f5e0ba0972f6488 125 SUPERFAMILY SSF51998 64 124 1.01E-23 T 14-10-2018 DA442_02550 585a6e7b730b25048f5e0ba0972f6488 125 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 125 1.5E-68 T 14-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA DA442_18865 c550bba9dd72ee156cfc28fbfe30ed2c 164 Pfam PF14317 YcxB-like protein 99 154 7.8E-7 T 14-10-2018 IPR025588 YcxB-like protein DA442_01035 93d92b84d654730f26f83b69718443c5 510 Pfam PF00884 Sulfatase 208 469 2.6E-25 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 DA442_01035 93d92b84d654730f26f83b69718443c5 510 Gene3D G3DSA:3.40.720.10 195 484 8.2E-43 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DA442_01035 93d92b84d654730f26f83b69718443c5 510 SUPERFAMILY SSF53649 207 471 2.49E-15 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DA442_22385 298adf9e54aef6c746150023ca1546ac 385 Gene3D G3DSA:3.40.710.10 18 273 4.8E-89 T 14-10-2018 DA442_22385 298adf9e54aef6c746150023ca1546ac 385 SUPERFAMILY SSF56601 1 275 8.11E-83 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DA442_22385 298adf9e54aef6c746150023ca1546ac 385 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 24 254 1.4E-85 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 DA442_22385 298adf9e54aef6c746150023ca1546ac 385 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 275 365 3.6E-22 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DA442_22385 298adf9e54aef6c746150023ca1546ac 385 Gene3D G3DSA:2.60.410.10 275 365 5.5E-27 T 14-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DA442_22385 298adf9e54aef6c746150023ca1546ac 385 SMART SM00936 275 365 1.3E-27 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DA442_22385 298adf9e54aef6c746150023ca1546ac 385 SUPERFAMILY SSF69189 275 367 4.9E-23 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DA442_22385 298adf9e54aef6c746150023ca1546ac 385 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 58 69 7.3E-19 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DA442_22385 298adf9e54aef6c746150023ca1546ac 385 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 141 154 7.3E-19 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DA442_22385 298adf9e54aef6c746150023ca1546ac 385 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 114 131 7.3E-19 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DA442_08040 eb9663b80d484f61a9c0a2a9bc539f82 88 Pfam PF11173 Protein of unknown function (DUF2960) 1 77 2.4E-36 T 14-10-2018 IPR021343 Protein of unknown function DUF2960 DA442_20030 2c4ac86b2049d00a01203881679560d5 262 Pfam PF13672 Protein phosphatase 2C 19 210 9.3E-22 T 14-10-2018 DA442_20030 2c4ac86b2049d00a01203881679560d5 262 SMART SM00332 1 235 2.2E-16 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DA442_20030 2c4ac86b2049d00a01203881679560d5 262 Gene3D G3DSA:3.60.40.10 1 240 1.1E-59 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DA442_20030 2c4ac86b2049d00a01203881679560d5 262 SUPERFAMILY SSF81606 8 237 6.93E-62 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DA442_20030 2c4ac86b2049d00a01203881679560d5 262 SMART SM00331 11 237 2.9E-23 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DA442_01390 5fe094ac046cb839037b65304aaf627b 183 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 3.6E-87 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 DA442_01390 5fe094ac046cb839037b65304aaf627b 183 PIRSF PIRSF039093 1 175 1.5E-87 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 DA442_01390 5fe094ac046cb839037b65304aaf627b 183 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 42.13 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 DA442_01390 5fe094ac046cb839037b65304aaf627b 183 Pfam PF00227 Proteasome subunit 2 169 8.2E-24 T 14-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 DA442_01390 5fe094ac046cb839037b65304aaf627b 183 SUPERFAMILY SSF56235 2 172 6.92E-58 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DA442_01390 5fe094ac046cb839037b65304aaf627b 183 Gene3D G3DSA:3.60.20.10 1 173 1.8E-67 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DA442_11345 d59fb2b8eaec8b947c6de1a9ce5bc21d 334 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 9.0E-54 T 14-10-2018 IPR016040 NAD(P)-binding domain DA442_11345 d59fb2b8eaec8b947c6de1a9ce5bc21d 334 Gene3D G3DSA:3.40.50.720 4 315 2.7E-97 T 14-10-2018 DA442_11345 d59fb2b8eaec8b947c6de1a9ce5bc21d 334 SUPERFAMILY SSF51735 1 333 3.82E-87 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_11345 d59fb2b8eaec8b947c6de1a9ce5bc21d 334 Gene3D G3DSA:3.90.25.10 179 327 2.7E-97 T 14-10-2018 DA442_11345 d59fb2b8eaec8b947c6de1a9ce5bc21d 334 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 3.3E-27 T 14-10-2018 DA442_11345 d59fb2b8eaec8b947c6de1a9ce5bc21d 334 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 3.3E-27 T 14-10-2018 DA442_11345 d59fb2b8eaec8b947c6de1a9ce5bc21d 334 PRINTS PR01713 Nucleotide sugar epimerase signature 215 230 3.3E-27 T 14-10-2018 DA442_11345 d59fb2b8eaec8b947c6de1a9ce5bc21d 334 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 3.3E-27 T 14-10-2018 DA442_19180 47bee081a5f3d185f7da292c2d506c4d 413 Gene3D G3DSA:2.40.160.60 22 413 4.9E-127 T 14-10-2018 DA442_19180 47bee081a5f3d185f7da292c2d506c4d 413 SUPERFAMILY SSF56935 22 412 1.24E-93 T 14-10-2018 DA442_19180 47bee081a5f3d185f7da292c2d506c4d 413 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 14 412 7.1E-134 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) DA442_12815 53770df763b4ac9139c75eb876dd76f6 127 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 126 3.0E-67 T 14-10-2018 IPR020911 Uncharacterised protein family UPF0325 DA442_12815 53770df763b4ac9139c75eb876dd76f6 127 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 127 31.205 T 14-10-2018 IPR020911 Uncharacterised protein family UPF0325 DA442_12815 53770df763b4ac9139c75eb876dd76f6 127 Pfam PF11944 Protein of unknown function (DUF3461) 1 126 6.2E-56 T 14-10-2018 IPR020911 Uncharacterised protein family UPF0325 DA442_08240 0943d6a46cf90b8ea7b7c9856640d9af 248 Gene3D G3DSA:2.60.120.10 43 164 1.3E-48 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DA442_08240 0943d6a46cf90b8ea7b7c9856640d9af 248 SUPERFAMILY SSF51206 23 162 1.44E-31 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like DA442_08240 0943d6a46cf90b8ea7b7c9856640d9af 248 Pfam PF13545 Crp-like helix-turn-helix domain 168 241 2.1E-17 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DA442_08240 0943d6a46cf90b8ea7b7c9856640d9af 248 Gene3D G3DSA:1.10.10.10 165 248 3.0E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_08240 0943d6a46cf90b8ea7b7c9856640d9af 248 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 14-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 DA442_08240 0943d6a46cf90b8ea7b7c9856640d9af 248 SUPERFAMILY SSF46785 165 245 1.95E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_08240 0943d6a46cf90b8ea7b7c9856640d9af 248 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 2.5E-11 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DA442_08240 0943d6a46cf90b8ea7b7c9856640d9af 248 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 2.5E-11 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DA442_08240 0943d6a46cf90b8ea7b7c9856640d9af 248 SMART SM00100 30 151 2.0E-20 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain DA442_08240 0943d6a46cf90b8ea7b7c9856640d9af 248 SMART SM00419 187 235 4.3E-15 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DA442_08240 0943d6a46cf90b8ea7b7c9856640d9af 248 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 2.2E-15 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain DA442_21080 8f2ccc829d8521f146dbe94feece1579 420 Pfam PF13520 Amino acid permease 8 367 1.6E-31 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DA442_21080 8f2ccc829d8521f146dbe94feece1579 420 Gene3D G3DSA:1.20.1740.10 1 418 9.2E-62 T 14-10-2018 DA442_21080 8f2ccc829d8521f146dbe94feece1579 420 PIRSF PIRSF006060 1 418 4.0E-60 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DA442_11915 68d96885885d1ce55e3abdcacb82e608 302 SUPERFAMILY SSF52768 3 282 3.64E-82 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily DA442_11915 68d96885885d1ce55e3abdcacb82e608 302 Pfam PF00850 Histone deacetylase domain 26 282 9.6E-51 T 14-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DA442_11915 68d96885885d1ce55e3abdcacb82e608 302 PRINTS PR01270 Histone deacetylase superfamily signature 225 235 5.5E-17 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DA442_11915 68d96885885d1ce55e3abdcacb82e608 302 PRINTS PR01270 Histone deacetylase superfamily signature 151 166 5.5E-17 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DA442_11915 68d96885885d1ce55e3abdcacb82e608 302 PRINTS PR01270 Histone deacetylase superfamily signature 117 140 5.5E-17 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DA442_11915 68d96885885d1ce55e3abdcacb82e608 302 Gene3D G3DSA:3.40.800.20 2 298 6.5E-67 T 14-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DA442_17760 63ecead99bf440d6b858aa753eb72f58 292 Pfam PF03466 LysR substrate binding domain 108 287 6.0E-16 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_17760 63ecead99bf440d6b858aa753eb72f58 292 Gene3D G3DSA:1.10.10.10 1 93 4.6E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_17760 63ecead99bf440d6b858aa753eb72f58 292 SUPERFAMILY SSF46785 1 86 2.18E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_17760 63ecead99bf440d6b858aa753eb72f58 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 8.4E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_17760 63ecead99bf440d6b858aa753eb72f58 292 SUPERFAMILY SSF53850 92 289 2.71E-23 T 14-10-2018 DA442_17760 63ecead99bf440d6b858aa753eb72f58 292 Gene3D G3DSA:3.40.190.290 94 282 1.2E-34 T 14-10-2018 DA442_03745 30ebe8758d86121f5169b7949b9eb5e9 154 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 147 24.635 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 DA442_03745 30ebe8758d86121f5169b7949b9eb5e9 154 Pfam PF02130 Uncharacterized protein family UPF0054 20 142 1.2E-38 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 DA442_03745 30ebe8758d86121f5169b7949b9eb5e9 154 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 113 123 - T 14-10-2018 IPR020549 Endoribonuclease YbeY, conserved site DA442_03745 30ebe8758d86121f5169b7949b9eb5e9 154 SUPERFAMILY SSF55486 3 150 1.54E-49 T 14-10-2018 DA442_03745 30ebe8758d86121f5169b7949b9eb5e9 154 Gene3D G3DSA:3.40.390.30 1 154 7.8E-60 T 14-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 DA442_03745 30ebe8758d86121f5169b7949b9eb5e9 154 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 39 143 1.0E-37 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 DA442_04230 48cd8f69cebc39878927a08197b64e90 153 Pfam PF01957 NfeD-like C-terminal, partner-binding 14 150 1.1E-25 T 14-10-2018 IPR002810 NfeD-like, C-terminal domain DA442_04230 48cd8f69cebc39878927a08197b64e90 153 Gene3D G3DSA:2.40.50.140 81 153 3.3E-10 T 14-10-2018 DA442_04230 48cd8f69cebc39878927a08197b64e90 153 SUPERFAMILY SSF141322 114 151 3.14E-5 T 14-10-2018 DA442_08360 2003349d93b0c6c3d7941a414020172e 180 Pfam PF07126 Cell-division protein ZapC 1 168 3.3E-66 T 14-10-2018 IPR009809 Cell division protein ZapC DA442_08360 2003349d93b0c6c3d7941a414020172e 180 Hamap MF_00906 Cell division protein ZapC [zapC]. 1 177 36.457 T 14-10-2018 IPR009809 Cell division protein ZapC DA442_08360 2003349d93b0c6c3d7941a414020172e 180 PIRSF PIRSF010252 1 178 3.1E-72 T 14-10-2018 IPR009809 Cell division protein ZapC DA442_08085 bf513090673affc2414c3f7f24b7b823 530 Pfam PF00005 ABC transporter 337 466 6.0E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_08085 bf513090673affc2414c3f7f24b7b823 530 SUPERFAMILY SSF52540 333 516 1.62E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_08085 bf513090673affc2414c3f7f24b7b823 530 Gene3D G3DSA:3.40.50.300 2 281 1.4E-56 T 14-10-2018 DA442_08085 bf513090673affc2414c3f7f24b7b823 530 Gene3D G3DSA:3.40.50.300 282 529 3.7E-50 T 14-10-2018 DA442_08085 bf513090673affc2414c3f7f24b7b823 530 SMART SM00382 26 238 3.1E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_08085 bf513090673affc2414c3f7f24b7b823 530 SMART SM00382 343 511 1.8E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_08085 bf513090673affc2414c3f7f24b7b823 530 Pfam PF12848 ABC transporter 224 309 1.0E-21 T 14-10-2018 IPR032781 ABC-transporter extension domain DA442_08085 bf513090673affc2414c3f7f24b7b823 530 SUPERFAMILY SSF52540 7 237 8.08E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_08085 bf513090673affc2414c3f7f24b7b823 530 Pfam PF00005 ABC transporter 18 184 1.0E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_02525 b79affba068bccaea32f8482a93fb633 160 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 3.7E-69 T 14-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 DA442_02525 b79affba068bccaea32f8482a93fb633 160 SUPERFAMILY SSF89562 1 158 2.22E-47 T 14-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily DA442_02525 b79affba068bccaea32f8482a93fb633 160 Pfam PF03737 Aldolase/RraA 5 152 3.8E-41 T 14-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein DA442_02525 b79affba068bccaea32f8482a93fb633 160 Gene3D G3DSA:3.50.30.40 1 160 2.3E-64 T 14-10-2018 DA442_19900 dfa266664abe55c62f5aa6ce1e40c0d5 334 PIRSF PIRSF017617 1 334 1.9E-135 T 14-10-2018 IPR023603 Threonine aldolase DA442_19900 dfa266664abe55c62f5aa6ce1e40c0d5 334 Gene3D G3DSA:3.90.1150.10 244 334 3.1E-24 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DA442_19900 dfa266664abe55c62f5aa6ce1e40c0d5 334 SUPERFAMILY SSF53383 1 332 1.46E-117 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_19900 dfa266664abe55c62f5aa6ce1e40c0d5 334 Pfam PF01212 Beta-eliminating lyase 2 283 6.5E-101 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 DA442_19900 dfa266664abe55c62f5aa6ce1e40c0d5 334 Gene3D G3DSA:3.40.640.10 1 242 3.5E-97 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_01570 1e1fbf170e64b7d5b96bd10146673d46 199 Pfam PF04225 Opacity-associated protein A LysM-like domain 115 199 4.3E-39 T 14-10-2018 IPR007340 Opacity-associated protein A DA442_01570 1e1fbf170e64b7d5b96bd10146673d46 199 Pfam PF08525 Opacity-associated protein A N-terminal motif 45 71 3.7E-7 T 14-10-2018 IPR013731 Opacity-associated protein A, N-terminal DA442_01570 1e1fbf170e64b7d5b96bd10146673d46 199 Gene3D G3DSA:3.10.450.350 103 193 1.1E-14 T 14-10-2018 DA442_22500 e89bfdac801586dbb65fe16ab5bba7dd 225 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 4 223 37.749 T 14-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DA442_22500 e89bfdac801586dbb65fe16ab5bba7dd 225 Gene3D G3DSA:1.10.3810.10 47 224 6.0E-53 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DA442_22500 e89bfdac801586dbb65fe16ab5bba7dd 225 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 5 220 2.4E-67 T 14-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DA442_22500 e89bfdac801586dbb65fe16ab5bba7dd 225 SUPERFAMILY SSF53955 51 221 9.28E-57 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily DA442_22500 e89bfdac801586dbb65fe16ab5bba7dd 225 Pfam PF00912 Transglycosylase 51 217 1.1E-50 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DA442_01465 d5416c7f0eac08b463d8687425d13580 63 SUPERFAMILY SSF46561 1 61 2.22E-23 T 14-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01465 d5416c7f0eac08b463d8687425d13580 63 Gene3D G3DSA:1.10.287.310 1 63 3.6E-31 T 14-10-2018 DA442_01465 d5416c7f0eac08b463d8687425d13580 63 Pfam PF00831 Ribosomal L29 protein 4 60 3.7E-25 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01465 d5416c7f0eac08b463d8687425d13580 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 19.099 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01465 d5416c7f0eac08b463d8687425d13580 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 14-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01465 d5416c7f0eac08b463d8687425d13580 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 1.4E-23 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_06710 49cdb640aad8c0d267d74ad65280fa5c 598 Pfam PF08439 Oligopeptidase F 106 174 1.9E-12 T 14-10-2018 IPR013647 Oligopeptidase F, N-terminal domain DA442_06710 49cdb640aad8c0d267d74ad65280fa5c 598 Gene3D G3DSA:1.20.140.70 20 170 2.1E-12 T 14-10-2018 DA442_06710 49cdb640aad8c0d267d74ad65280fa5c 598 Gene3D G3DSA:1.10.1370.20 219 598 1.2E-107 T 14-10-2018 DA442_06710 49cdb640aad8c0d267d74ad65280fa5c 598 SUPERFAMILY SSF55486 4 576 4.03E-96 T 14-10-2018 DA442_06710 49cdb640aad8c0d267d74ad65280fa5c 598 Pfam PF01432 Peptidase family M3 337 580 6.2E-22 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 DA442_06710 49cdb640aad8c0d267d74ad65280fa5c 598 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 5 593 2.2E-202 T 14-10-2018 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 DA442_13885 bf9919e835e3c6e6e2a7b795a82dc2c3 314 Gene3D G3DSA:3.30.2350.10 1 248 5.2E-96 T 14-10-2018 DA442_13885 bf9919e835e3c6e6e2a7b795a82dc2c3 314 SUPERFAMILY SSF88697 250 310 6.96E-15 T 14-10-2018 IPR015947 PUA-like superfamily DA442_13885 bf9919e835e3c6e6e2a7b795a82dc2c3 314 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 218 6.9E-87 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_13885 bf9919e835e3c6e6e2a7b795a82dc2c3 314 Gene3D G3DSA:2.30.130.10 249 311 2.3E-23 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 DA442_13885 bf9919e835e3c6e6e2a7b795a82dc2c3 314 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 179 4.9E-57 T 14-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 DA442_13885 bf9919e835e3c6e6e2a7b795a82dc2c3 314 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 308 18.963 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_13885 bf9919e835e3c6e6e2a7b795a82dc2c3 314 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 251 308 7.6E-20 T 14-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_13885 bf9919e835e3c6e6e2a7b795a82dc2c3 314 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 247 1.3E-24 T 14-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 DA442_13885 bf9919e835e3c6e6e2a7b795a82dc2c3 314 SUPERFAMILY SSF55120 9 247 2.5E-84 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_11355 a9d5d2d98753c772087a3fb82bbfb0cd 666 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 147 544 1.8E-60 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain DA442_11355 a9d5d2d98753c772087a3fb82bbfb0cd 666 PIRSF PIRSF002741 53 627 3.3E-66 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DA442_11355 a9d5d2d98753c772087a3fb82bbfb0cd 666 Gene3D G3DSA:3.40.190.10 70 375 6.4E-44 T 14-10-2018 DA442_11355 a9d5d2d98753c772087a3fb82bbfb0cd 666 SUPERFAMILY SSF53850 99 620 1.72E-93 T 14-10-2018 DA442_11355 a9d5d2d98753c772087a3fb82bbfb0cd 666 Gene3D G3DSA:3.10.105.10 376 602 3.4E-41 T 14-10-2018 DA442_16775 bc8ae4ede0ab64307ebdf69687443da8 284 Gene3D G3DSA:1.20.120.1780 169 284 5.0E-13 T 14-10-2018 DA442_16775 bc8ae4ede0ab64307ebdf69687443da8 284 Pfam PF01040 UbiA prenyltransferase family 24 266 9.4E-70 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 DA442_16775 bc8ae4ede0ab64307ebdf69687443da8 284 Gene3D G3DSA:1.10.357.140 19 168 2.7E-44 T 14-10-2018 DA442_16775 bc8ae4ede0ab64307ebdf69687443da8 284 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 1 284 29.946 T 14-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 DA442_16775 bc8ae4ede0ab64307ebdf69687443da8 284 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 8 283 1.0E-108 T 14-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 DA442_04810 e9477c0ae39d240a03e5b6e00cf73e06 619 Pfam PF13624 SurA N-terminal domain 1 166 4.8E-51 T 14-10-2018 DA442_04810 e9477c0ae39d240a03e5b6e00cf73e06 619 SUPERFAMILY SSF109998 39 245 1.37E-38 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily DA442_04810 e9477c0ae39d240a03e5b6e00cf73e06 619 Pfam PF13616 PPIC-type PPIASE domain 262 361 1.3E-24 T 14-10-2018 DA442_04810 e9477c0ae39d240a03e5b6e00cf73e06 619 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 299 320 - T 14-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 DA442_04810 e9477c0ae39d240a03e5b6e00cf73e06 619 SUPERFAMILY SSF54534 225 361 1.77E-31 T 14-10-2018 DA442_04810 e9477c0ae39d240a03e5b6e00cf73e06 619 Gene3D G3DSA:3.10.50.40 269 363 9.7E-35 T 14-10-2018 DA442_04810 e9477c0ae39d240a03e5b6e00cf73e06 619 Gene3D G3DSA:1.10.4030.30 42 175 1.2E-14 T 14-10-2018 DA442_04810 e9477c0ae39d240a03e5b6e00cf73e06 619 Gene3D G3DSA:1.10.4030.30 241 373 9.7E-35 T 14-10-2018 DA442_16645 2004ced13d0f69fe5d156c1a2cba952d 347 SUPERFAMILY SSF56176 8 198 1.85E-41 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DA442_16645 2004ced13d0f69fe5d156c1a2cba952d 347 Gene3D G3DSA:3.90.78.10 223 347 1.7E-41 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DA442_16645 2004ced13d0f69fe5d156c1a2cba952d 347 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 347 80.532 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DA442_16645 2004ced13d0f69fe5d156c1a2cba952d 347 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 9 332 6.4E-87 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DA442_16645 2004ced13d0f69fe5d156c1a2cba952d 347 Gene3D G3DSA:3.30.465.10 73 222 4.3E-52 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DA442_16645 2004ced13d0f69fe5d156c1a2cba952d 347 Pfam PF01565 FAD binding domain 23 144 2.5E-18 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 DA442_16645 2004ced13d0f69fe5d156c1a2cba952d 347 SUPERFAMILY SSF56194 207 341 1.96E-46 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DA442_16645 2004ced13d0f69fe5d156c1a2cba952d 347 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 210 331 2.0E-30 T 14-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DA442_16645 2004ced13d0f69fe5d156c1a2cba952d 347 Gene3D G3DSA:3.30.43.10 1 71 1.2E-22 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 DA442_17965 ba260d610dbf42ca9fbac72528903bbf 389 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 15 124 8.2E-35 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 DA442_17965 ba260d610dbf42ca9fbac72528903bbf 389 Gene3D G3DSA:1.10.540.10 3 127 1.3E-43 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DA442_17965 ba260d610dbf42ca9fbac72528903bbf 389 Gene3D G3DSA:2.40.110.10 128 241 1.5E-40 T 14-10-2018 DA442_17965 ba260d610dbf42ca9fbac72528903bbf 389 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 343 362 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 DA442_17965 ba260d610dbf42ca9fbac72528903bbf 389 SUPERFAMILY SSF56645 5 249 1.02E-79 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DA442_17965 ba260d610dbf42ca9fbac72528903bbf 389 Gene3D G3DSA:1.20.140.10 242 389 3.1E-47 T 14-10-2018 DA442_17965 ba260d610dbf42ca9fbac72528903bbf 389 SUPERFAMILY SSF47203 236 386 1.77E-46 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DA442_17965 ba260d610dbf42ca9fbac72528903bbf 389 PIRSF PIRSF016578 15 103 0.031 T 14-10-2018 DA442_17965 ba260d610dbf42ca9fbac72528903bbf 389 PIRSF PIRSF016578 133 389 7.9E-12 T 14-10-2018 DA442_17965 ba260d610dbf42ca9fbac72528903bbf 389 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 224 1.6E-22 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 DA442_17965 ba260d610dbf42ca9fbac72528903bbf 389 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 237 384 1.2E-42 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 DA442_17965 ba260d610dbf42ca9fbac72528903bbf 389 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 131 143 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 DA442_23235 54b5b33229efd68ed31acaecea24ea71 251 Gene3D G3DSA:3.40.190.10 33 250 1.6E-16 T 14-10-2018 DA442_23235 54b5b33229efd68ed31acaecea24ea71 251 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 251 5.5E-12 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DA442_23235 54b5b33229efd68ed31acaecea24ea71 251 Gene3D G3DSA:3.40.190.10 110 212 1.6E-16 T 14-10-2018 DA442_23235 54b5b33229efd68ed31acaecea24ea71 251 SUPERFAMILY SSF53850 24 251 1.15E-24 T 14-10-2018 DA442_00465 21755237612729cdb7d3b1e3f341b635 170 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 45 154 1.2E-8 T 14-10-2018 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III DA442_19235 f6bccc64e9cf58175fe0182969515d75 551 Pfam PF09818 Predicted ATPase of the ABC class 1 438 1.4E-186 T 14-10-2018 IPR019195 ABC transporter, ATPase, putative DA442_19235 f6bccc64e9cf58175fe0182969515d75 551 SUPERFAMILY SSF52540 227 410 6.28E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_20355 4bc49b10b1dcff740da56b50435157ab 785 Pfam PF01627 Hpt domain 690 761 2.4E-6 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 DA442_20355 4bc49b10b1dcff740da56b50435157ab 785 Gene3D G3DSA:3.40.50.2300 497 641 9.1E-33 T 14-10-2018 DA442_20355 4bc49b10b1dcff740da56b50435157ab 785 Gene3D G3DSA:3.30.565.10 334 496 1.3E-48 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_20355 4bc49b10b1dcff740da56b50435157ab 785 Pfam PF00072 Response regulator receiver domain 517 627 4.4E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_20355 4bc49b10b1dcff740da56b50435157ab 785 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 382 491 2.7E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_20355 4bc49b10b1dcff740da56b50435157ab 785 Gene3D G3DSA:1.10.287.130 237 332 2.0E-26 T 14-10-2018 DA442_20355 4bc49b10b1dcff740da56b50435157ab 785 SUPERFAMILY SSF55874 323 498 1.83E-47 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_20355 4bc49b10b1dcff740da56b50435157ab 785 SUPERFAMILY SSF52172 513 643 8.4E-31 T 14-10-2018 IPR011006 CheY-like superfamily DA442_20355 4bc49b10b1dcff740da56b50435157ab 785 Gene3D G3DSA:1.20.120.160 659 768 2.5E-9 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 DA442_20355 4bc49b10b1dcff740da56b50435157ab 785 SUPERFAMILY SSF47384 254 335 2.75E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DA442_20355 4bc49b10b1dcff740da56b50435157ab 785 SUPERFAMILY SSF47226 611 759 6.93E-13 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 DA442_20355 4bc49b10b1dcff740da56b50435157ab 785 Pfam PF00512 His Kinase A (phospho-acceptor) domain 269 333 2.2E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_20355 4bc49b10b1dcff740da56b50435157ab 785 SMART SM00387 381 494 2.6E-36 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_20355 4bc49b10b1dcff740da56b50435157ab 785 SMART SM00388 269 334 2.9E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_20355 4bc49b10b1dcff740da56b50435157ab 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 447 2.3E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_20355 4bc49b10b1dcff740da56b50435157ab 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 472 2.3E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_20355 4bc49b10b1dcff740da56b50435157ab 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 433 2.3E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_20355 4bc49b10b1dcff740da56b50435157ab 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 491 2.3E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_20355 4bc49b10b1dcff740da56b50435157ab 785 SMART SM00448 515 627 2.4E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_06280 e7e2efeb8c1f67dc7e2efc43cdeafe06 458 PIRSF PIRSF006603 10 458 4.0E-65 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DA442_06280 e7e2efeb8c1f67dc7e2efc43cdeafe06 458 TIGRFAM TIGR00797 matE: MATE efflux family protein 25 423 8.9E-60 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DA442_06280 e7e2efeb8c1f67dc7e2efc43cdeafe06 458 Pfam PF01554 MatE 25 185 4.7E-24 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DA442_06280 e7e2efeb8c1f67dc7e2efc43cdeafe06 458 Pfam PF01554 MatE 252 413 4.9E-20 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DA442_19505 c74b9e587c72e37d93d1b57138ee5d6c 229 Gene3D G3DSA:1.10.3720.10 3 224 1.5E-59 T 14-10-2018 IPR035906 MetI-like superfamily DA442_19505 c74b9e587c72e37d93d1b57138ee5d6c 229 SUPERFAMILY SSF161098 6 217 4.06E-49 T 14-10-2018 IPR035906 MetI-like superfamily DA442_19505 c74b9e587c72e37d93d1b57138ee5d6c 229 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 10 219 2.3E-72 T 14-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 DA442_19505 c74b9e587c72e37d93d1b57138ee5d6c 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 24 213 1.3E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DA442_19805 452cf912108125e1d6dadc6a32df65ca 310 SMART SM00880 26 288 4.7E-27 T 14-10-2018 IPR007899 CHAD domain DA442_19805 452cf912108125e1d6dadc6a32df65ca 310 Gene3D G3DSA:1.40.20.10 6 309 7.2E-57 T 14-10-2018 IPR038186 CHAD domain superfamily DA442_19805 452cf912108125e1d6dadc6a32df65ca 310 Pfam PF05235 CHAD domain 29 254 2.4E-45 T 14-10-2018 IPR007899 CHAD domain DA442_14620 120b33a18477bf6f58ad8606d3616ae2 402 Gene3D G3DSA:3.30.9.50 80 270 1.1E-122 T 14-10-2018 DA442_14620 120b33a18477bf6f58ad8606d3616ae2 402 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 14-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 DA442_14620 120b33a18477bf6f58ad8606d3616ae2 402 Gene3D G3DSA:3.50.50.60 6 339 1.1E-122 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_14620 120b33a18477bf6f58ad8606d3616ae2 402 Pfam PF01494 FAD binding domain 5 347 3.3E-27 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 DA442_14620 120b33a18477bf6f58ad8606d3616ae2 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 1.8E-18 T 14-10-2018 DA442_14620 120b33a18477bf6f58ad8606d3616ae2 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 1.8E-18 T 14-10-2018 DA442_14620 120b33a18477bf6f58ad8606d3616ae2 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 1.8E-18 T 14-10-2018 DA442_14620 120b33a18477bf6f58ad8606d3616ae2 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 1.8E-18 T 14-10-2018 DA442_14620 120b33a18477bf6f58ad8606d3616ae2 402 SUPERFAMILY SSF51905 5 385 2.45E-58 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_14620 120b33a18477bf6f58ad8606d3616ae2 402 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 391 4.4E-138 T 14-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 DA442_00805 904572ce771db18d1a609437f1f34817 430 Gene3D G3DSA:3.30.565.10 284 430 9.9E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_00805 904572ce771db18d1a609437f1f34817 430 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 323 428 6.0E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_00805 904572ce771db18d1a609437f1f34817 430 SUPERFAMILY SSF55874 285 429 3.14E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_00805 904572ce771db18d1a609437f1f34817 430 SUPERFAMILY SSF47384 215 277 5.49E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DA442_00805 904572ce771db18d1a609437f1f34817 430 Pfam PF00512 His Kinase A (phospho-acceptor) domain 225 276 2.7E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_00805 904572ce771db18d1a609437f1f34817 430 SMART SM00387 321 430 3.1E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_00805 904572ce771db18d1a609437f1f34817 430 Gene3D G3DSA:1.10.287.130 167 277 1.2E-23 T 14-10-2018 DA442_00805 904572ce771db18d1a609437f1f34817 430 SMART SM00304 169 221 9.5E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_00805 904572ce771db18d1a609437f1f34817 430 SMART SM00388 222 282 2.3E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_00805 904572ce771db18d1a609437f1f34817 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 386 1.4E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_00805 904572ce771db18d1a609437f1f34817 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 372 1.4E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_00805 904572ce771db18d1a609437f1f34817 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 409 1.4E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_00805 904572ce771db18d1a609437f1f34817 430 Pfam PF00672 HAMP domain 169 217 3.7E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_00805 904572ce771db18d1a609437f1f34817 430 SUPERFAMILY SSF158472 171 219 7.06E-5 T 14-10-2018 DA442_05275 a321a1ad8891d30d26f01bc3553b66c2 217 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 32 213 1.7E-30 T 14-10-2018 IPR018635 Uncharacterised protein family UPF0319 DA442_05275 a321a1ad8891d30d26f01bc3553b66c2 217 Hamap MF_00789 UPF0319 protein YccT [yccT]. 5 216 21.563 T 14-10-2018 IPR018635 Uncharacterised protein family UPF0319 DA442_12030 0bad6699369094c51b2de88427e5f69d 559 SUPERFAMILY SSF82861 300 386 7.19E-14 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 DA442_12030 0bad6699369094c51b2de88427e5f69d 559 Pfam PF00924 Mechanosensitive ion channel 350 542 2.7E-54 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 DA442_12030 0bad6699369094c51b2de88427e5f69d 559 Gene3D G3DSA:3.30.70.100 454 546 4.2E-26 T 14-10-2018 DA442_12030 0bad6699369094c51b2de88427e5f69d 559 SUPERFAMILY SSF82689 456 552 1.57E-31 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 DA442_12030 0bad6699369094c51b2de88427e5f69d 559 SUPERFAMILY SSF50182 387 453 2.22E-18 T 14-10-2018 IPR010920 LSM domain superfamily DA442_12030 0bad6699369094c51b2de88427e5f69d 559 Gene3D G3DSA:2.30.30.60 403 451 2.6E-18 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily DA442_02075 15d8d92abe18c1510592c8271480e716 291 Gene3D G3DSA:1.10.443.10 114 290 7.6E-9 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DA442_02075 15d8d92abe18c1510592c8271480e716 291 SUPERFAMILY SSF56349 43 288 2.59E-12 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DA442_02075 15d8d92abe18c1510592c8271480e716 291 Pfam PF12834 Phage integrase, N-terminal 6 93 3.5E-18 T 14-10-2018 IPR024457 Putative integrase, N-terminal DA442_02075 15d8d92abe18c1510592c8271480e716 291 Pfam PF12835 Integrase 117 237 7.4E-16 T 14-10-2018 IPR024456 Integrase catalytic domain, putative DA442_25385 269f062756e7310ee778d1482424431a 304 SUPERFAMILY SSF52172 171 292 2.85E-21 T 14-10-2018 IPR011006 CheY-like superfamily DA442_25385 269f062756e7310ee778d1482424431a 304 Pfam PF01584 CheW-like domain 14 149 8.9E-30 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DA442_25385 269f062756e7310ee778d1482424431a 304 SUPERFAMILY SSF50341 10 152 1.23E-29 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 DA442_25385 269f062756e7310ee778d1482424431a 304 PIRSF PIRSF002867 1 298 1.4E-87 T 14-10-2018 IPR024181 Chemotaxis response regulator CheV DA442_25385 269f062756e7310ee778d1482424431a 304 Pfam PF00072 Response regulator receiver domain 175 289 1.9E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_25385 269f062756e7310ee778d1482424431a 304 Gene3D G3DSA:2.40.50.180 31 146 1.0E-23 T 14-10-2018 DA442_25385 269f062756e7310ee778d1482424431a 304 SMART SM00448 173 290 2.1E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_25385 269f062756e7310ee778d1482424431a 304 Gene3D G3DSA:2.30.30.40 17 141 1.0E-23 T 14-10-2018 DA442_25385 269f062756e7310ee778d1482424431a 304 SMART SM00260 11 147 2.1E-20 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DA442_25385 269f062756e7310ee778d1482424431a 304 Gene3D G3DSA:3.40.50.2300 163 299 1.1E-22 T 14-10-2018 DA442_25165 a01c2fffa5643ad3b420f06d3ef0e172 311 SUPERFAMILY SSF46785 4 111 9.58E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_25165 a01c2fffa5643ad3b420f06d3ef0e172 311 Gene3D G3DSA:1.10.10.10 3 88 1.8E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_25165 a01c2fffa5643ad3b420f06d3ef0e172 311 SUPERFAMILY SSF53850 88 304 1.3E-40 T 14-10-2018 DA442_25165 a01c2fffa5643ad3b420f06d3ef0e172 311 Pfam PF03466 LysR substrate binding domain 89 301 2.0E-43 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_25165 a01c2fffa5643ad3b420f06d3ef0e172 311 Gene3D G3DSA:3.40.190.10 91 299 3.6E-66 T 14-10-2018 DA442_25165 a01c2fffa5643ad3b420f06d3ef0e172 311 Gene3D G3DSA:3.40.190.10 163 272 3.6E-66 T 14-10-2018 DA442_25165 a01c2fffa5643ad3b420f06d3ef0e172 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 4.3E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_13860 1070fa704b7392eafc3e73fc13b17749 448 Pfam PF01554 MatE 240 398 4.3E-15 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DA442_13860 1070fa704b7392eafc3e73fc13b17749 448 Pfam PF01554 MatE 15 176 4.0E-21 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DA442_13860 1070fa704b7392eafc3e73fc13b17749 448 PIRSF PIRSF006603 1 439 5.9E-67 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DA442_13860 1070fa704b7392eafc3e73fc13b17749 448 TIGRFAM TIGR00797 matE: MATE efflux family protein 15 410 2.1E-48 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DA442_13800 bd984e96767c5a8a10a6a9f7f0ffb2a8 64 SUPERFAMILY SSF46955 11 59 2.75E-5 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DA442_17700 8ed4d9a6ac51ab21002ddee68b8ca509 237 Gene3D G3DSA:3.40.50.300 1 236 1.6E-72 T 14-10-2018 DA442_17700 8ed4d9a6ac51ab21002ddee68b8ca509 237 SUPERFAMILY SSF52540 3 223 4.92E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_17700 8ed4d9a6ac51ab21002ddee68b8ca509 237 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_17700 8ed4d9a6ac51ab21002ddee68b8ca509 237 SMART SM00382 32 220 1.8E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_17700 8ed4d9a6ac51ab21002ddee68b8ca509 237 Pfam PF00005 ABC transporter 24 172 8.0E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_23420 663ba9cfb53ee32add0ec721184090fc 160 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 77 156 3.7E-33 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 DA442_23420 663ba9cfb53ee32add0ec721184090fc 160 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 7 156 43.925 T 14-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 DA442_23420 663ba9cfb53ee32add0ec721184090fc 160 SUPERFAMILY SSF46767 75 156 3.79E-33 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 DA442_23420 663ba9cfb53ee32add0ec721184090fc 160 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 76 155 2.9E-38 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 DA442_23420 663ba9cfb53ee32add0ec721184090fc 160 Gene3D G3DSA:3.30.160.70 3 71 1.2E-17 T 14-10-2018 DA442_23420 663ba9cfb53ee32add0ec721184090fc 160 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 5 72 4.3E-6 T 14-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 DA442_23420 663ba9cfb53ee32add0ec721184090fc 160 SUPERFAMILY SSF53155 4 80 5.89E-19 T 14-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 DA442_23420 663ba9cfb53ee32add0ec721184090fc 160 Gene3D G3DSA:1.10.10.10 75 158 1.6E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_23420 663ba9cfb53ee32add0ec721184090fc 160 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 126 132 - T 14-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 DA442_06275 3df9c7ca097dcfeb378dd895225e5eba 492 Pfam PF13460 NAD(P)H-binding 8 150 4.6E-15 T 14-10-2018 IPR016040 NAD(P)-binding domain DA442_06275 3df9c7ca097dcfeb378dd895225e5eba 492 SUPERFAMILY SSF51735 1 295 1.31E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_06275 3df9c7ca097dcfeb378dd895225e5eba 492 Pfam PF11066 Protein of unknown function (DUF2867) 333 466 5.2E-13 T 14-10-2018 IPR021295 Protein of unknown function DUF2867 DA442_06275 3df9c7ca097dcfeb378dd895225e5eba 492 Gene3D G3DSA:3.40.50.720 2 262 3.3E-35 T 14-10-2018 DA442_15070 bc726e283dda04b14567b526bff27707 407 Gene3D G3DSA:3.75.10.10 6 404 2.0E-146 T 14-10-2018 DA442_15070 bc726e283dda04b14567b526bff27707 407 Hamap MF_00242 Arginine deiminase [arcA]. 1 407 45.023 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 DA442_15070 bc726e283dda04b14567b526bff27707 407 PIRSF PIRSF006356 1 407 6.1E-156 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 DA442_15070 bc726e283dda04b14567b526bff27707 407 Pfam PF02274 Amidinotransferase 18 404 3.4E-110 T 14-10-2018 DA442_15070 bc726e283dda04b14567b526bff27707 407 Gene3D G3DSA:1.10.3930.10 68 148 2.0E-146 T 14-10-2018 DA442_15070 bc726e283dda04b14567b526bff27707 407 TIGRFAM TIGR01078 arcA: arginine deiminase 4 407 3.2E-173 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 DA442_15070 bc726e283dda04b14567b526bff27707 407 PRINTS PR01466 Bacterial arginine deiminase signature 363 377 2.9E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 DA442_15070 bc726e283dda04b14567b526bff27707 407 PRINTS PR01466 Bacterial arginine deiminase signature 343 360 2.9E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 DA442_15070 bc726e283dda04b14567b526bff27707 407 PRINTS PR01466 Bacterial arginine deiminase signature 177 192 2.9E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 DA442_15070 bc726e283dda04b14567b526bff27707 407 PRINTS PR01466 Bacterial arginine deiminase signature 386 404 2.9E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 DA442_15070 bc726e283dda04b14567b526bff27707 407 PRINTS PR01466 Bacterial arginine deiminase signature 2 22 2.9E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 DA442_15070 bc726e283dda04b14567b526bff27707 407 PRINTS PR01466 Bacterial arginine deiminase signature 149 167 2.9E-44 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 DA442_15070 bc726e283dda04b14567b526bff27707 407 SUPERFAMILY SSF55909 3 407 3.93E-129 T 14-10-2018 DA442_00870 c3643dbca221ce826ee45966c6d5f96c 254 Pfam PF11932 Protein of unknown function (DUF3450) 13 249 1.1E-88 T 14-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 DA442_00870 c3643dbca221ce826ee45966c6d5f96c 254 PIRSF PIRSF028069 4 254 4.3E-98 T 14-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 DA442_22565 9751fc303241e0df544d3acc204541ca 405 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 3 404 36.658 T 14-10-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 DA442_22565 9751fc303241e0df544d3acc204541ca 405 Pfam PF00375 Sodium:dicarboxylate symporter family 15 398 5.0E-66 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DA442_22565 9751fc303241e0df544d3acc204541ca 405 Gene3D G3DSA:1.10.3860.10 3 405 4.8E-72 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 DA442_22565 9751fc303241e0df544d3acc204541ca 405 PRINTS PR00173 Glutamate-aspartate symporter signature 13 33 1.1E-12 T 14-10-2018 DA442_22565 9751fc303241e0df544d3acc204541ca 405 PRINTS PR00173 Glutamate-aspartate symporter signature 322 341 1.1E-12 T 14-10-2018 DA442_22565 9751fc303241e0df544d3acc204541ca 405 PRINTS PR00173 Glutamate-aspartate symporter signature 185 204 1.1E-12 T 14-10-2018 DA442_22565 9751fc303241e0df544d3acc204541ca 405 PRINTS PR00173 Glutamate-aspartate symporter signature 287 313 1.1E-12 T 14-10-2018 DA442_22565 9751fc303241e0df544d3acc204541ca 405 PRINTS PR00173 Glutamate-aspartate symporter signature 220 239 1.1E-12 T 14-10-2018 DA442_22565 9751fc303241e0df544d3acc204541ca 405 SUPERFAMILY SSF118215 15 399 2.09E-97 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 DA442_15305 24dbe42900877596268382463a077d0b 154 SUPERFAMILY SSF54523 7 135 1.57E-13 T 14-10-2018 DA442_15305 24dbe42900877596268382463a077d0b 154 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 2.0E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DA442_15305 24dbe42900877596268382463a077d0b 154 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 7.2E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DA442_15305 24dbe42900877596268382463a077d0b 154 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DA442_15305 24dbe42900877596268382463a077d0b 154 Gene3D G3DSA:3.30.700.10 7 152 4.5E-14 T 14-10-2018 DA442_19945 a93e39d251c3367aa531e837ed30f242 174 SUPERFAMILY SSF52540 2 110 1.91E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_19945 a93e39d251c3367aa531e837ed30f242 174 Pfam PF13671 AAA domain 6 49 3.6E-6 T 14-10-2018 DA442_19945 a93e39d251c3367aa531e837ed30f242 174 Gene3D G3DSA:3.40.50.300 1 152 6.6E-15 T 14-10-2018 DA442_13385 ba22fce8cce5abb48305252e423a4718 782 Gene3D G3DSA:2.40.10.220 466 582 7.2E-8 T 14-10-2018 DA442_13385 ba22fce8cce5abb48305252e423a4718 782 SUPERFAMILY SSF141371 466 554 9.42E-7 T 14-10-2018 DA442_13385 ba22fce8cce5abb48305252e423a4718 782 SUPERFAMILY SSF141371 142 200 7.85E-5 T 14-10-2018 DA442_13385 ba22fce8cce5abb48305252e423a4718 782 Pfam PF07238 PilZ domain 470 560 5.0E-14 T 14-10-2018 IPR009875 PilZ domain GO:0035438 DA442_13385 ba22fce8cce5abb48305252e423a4718 782 Pfam PF07238 PilZ domain 145 229 7.4E-9 T 14-10-2018 IPR009875 PilZ domain GO:0035438 DA442_08620 cd80303d1eb8be689761f7334a57f74b 380 ProSitePatterns PS00480 Citrate synthase signature. 263 275 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 DA442_08620 cd80303d1eb8be689761f7334a57f74b 380 Pfam PF00285 Citrate synthase, C-terminal domain 15 362 1.2E-111 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 DA442_08620 cd80303d1eb8be689761f7334a57f74b 380 PRINTS PR00143 Citrate synthase signature 130 143 1.3E-35 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 DA442_08620 cd80303d1eb8be689761f7334a57f74b 380 PRINTS PR00143 Citrate synthase signature 256 276 1.3E-35 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 DA442_08620 cd80303d1eb8be689761f7334a57f74b 380 PRINTS PR00143 Citrate synthase signature 181 196 1.3E-35 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 DA442_08620 cd80303d1eb8be689761f7334a57f74b 380 PRINTS PR00143 Citrate synthase signature 313 329 1.3E-35 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 DA442_08620 cd80303d1eb8be689761f7334a57f74b 380 PRINTS PR00143 Citrate synthase signature 203 231 1.3E-35 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 DA442_08620 cd80303d1eb8be689761f7334a57f74b 380 PRINTS PR00143 Citrate synthase signature 333 347 1.3E-35 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 DA442_08620 cd80303d1eb8be689761f7334a57f74b 380 Gene3D G3DSA:1.10.230.10 229 327 2.5E-116 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain DA442_08620 cd80303d1eb8be689761f7334a57f74b 380 Gene3D G3DSA:1.10.580.10 36 360 2.5E-116 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 DA442_08620 cd80303d1eb8be689761f7334a57f74b 380 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 15 380 3.1E-160 T 14-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 DA442_08620 cd80303d1eb8be689761f7334a57f74b 380 SUPERFAMILY SSF48256 14 380 1.7E-123 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 DA442_08620 cd80303d1eb8be689761f7334a57f74b 380 PIRSF PIRSF001369 8 380 1.2E-116 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type DA442_23775 0f630310f756592ef4a6ae1fae8d8656 299 SUPERFAMILY SSF103481 188 285 5.1E-12 T 14-10-2018 DA442_23775 0f630310f756592ef4a6ae1fae8d8656 299 Pfam PF00892 EamA-like transporter family 151 283 1.5E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DA442_23775 0f630310f756592ef4a6ae1fae8d8656 299 Pfam PF00892 EamA-like transporter family 9 135 1.6E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DA442_23775 0f630310f756592ef4a6ae1fae8d8656 299 SUPERFAMILY SSF103481 42 138 3.01E-12 T 14-10-2018 DA442_08680 bc948a2811a59f479d8dd3d972860d9a 607 Pfam PF04792 V antigen (LcrV) protein 393 607 3.5E-30 T 14-10-2018 IPR005413 Low calcium response V antigen GO:0005576|GO:0009405 DA442_08680 bc948a2811a59f479d8dd3d972860d9a 607 SUPERFAMILY SSF103388 350 606 3.53E-89 T 14-10-2018 IPR036139 Virulence-associated V antigen superfamily GO:0005576|GO:0009405 DA442_14140 4cc1a4093f0129b43061f7f523a17a45 294 SUPERFAMILY SSF52374 4 280 3.66E-84 T 14-10-2018 DA442_14140 4cc1a4093f0129b43061f7f523a17a45 294 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 4 286 40.149 T 14-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 DA442_14140 4cc1a4093f0129b43061f7f523a17a45 294 Gene3D G3DSA:3.40.50.620 79 214 1.3E-106 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DA442_14140 4cc1a4093f0129b43061f7f523a17a45 294 Gene3D G3DSA:3.40.50.620 4 280 1.3E-106 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DA442_14140 4cc1a4093f0129b43061f7f523a17a45 294 PRINTS PR00987 Glutamyl-tRNA synthetase signature 7 19 3.9E-13 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DA442_14140 4cc1a4093f0129b43061f7f523a17a45 294 PRINTS PR00987 Glutamyl-tRNA synthetase signature 166 176 3.9E-13 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DA442_14140 4cc1a4093f0129b43061f7f523a17a45 294 PRINTS PR00987 Glutamyl-tRNA synthetase signature 36 49 3.9E-13 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DA442_14140 4cc1a4093f0129b43061f7f523a17a45 294 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 190 3.9E-13 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DA442_14140 4cc1a4093f0129b43061f7f523a17a45 294 PRINTS PR00987 Glutamyl-tRNA synthetase signature 21 32 3.9E-13 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DA442_14140 4cc1a4093f0129b43061f7f523a17a45 294 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 4 267 1.3E-112 T 14-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 DA442_14140 4cc1a4093f0129b43061f7f523a17a45 294 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 124 265 9.2E-17 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 DA442_14140 4cc1a4093f0129b43061f7f523a17a45 294 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 7 109 7.6E-28 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 DA442_08730 9a21eae008dbefd3e05266c55e9c1110 153 Pfam PF07321 Type III secretion protein YscO 2 149 8.4E-43 T 14-10-2018 IPR009929 Type III secretion sytem,YscO DA442_14025 5edda75e1d2ef7cc165886609aa8f9f4 560 Gene3D G3DSA:3.40.190.10 46 543 1.6E-195 T 14-10-2018 DA442_14025 5edda75e1d2ef7cc165886609aa8f9f4 560 Gene3D G3DSA:3.10.105.10 272 519 1.6E-195 T 14-10-2018 DA442_14025 5edda75e1d2ef7cc165886609aa8f9f4 560 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 446 9.8E-76 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain DA442_14025 5edda75e1d2ef7cc165886609aa8f9f4 560 SUPERFAMILY SSF53850 42 544 2.95E-107 T 14-10-2018 DA442_14025 5edda75e1d2ef7cc165886609aa8f9f4 560 PIRSF PIRSF002741 5 542 3.9E-68 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DA442_14025 5edda75e1d2ef7cc165886609aa8f9f4 560 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 84 106 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site DA442_14025 5edda75e1d2ef7cc165886609aa8f9f4 560 Gene3D G3DSA:3.90.76.10 66 172 1.6E-195 T 14-10-2018 DA442_14465 fd6494c03d85e4a3bce31443e5077770 258 Gene3D G3DSA:3.40.1210.10 2 258 7.1E-97 T 14-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 DA442_14465 fd6494c03d85e4a3bce31443e5077770 258 Pfam PF01975 Survival protein SurE 13 191 1.8E-61 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 DA442_14465 fd6494c03d85e4a3bce31443e5077770 258 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 12 242 6.5E-74 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 DA442_14465 fd6494c03d85e4a3bce31443e5077770 258 SUPERFAMILY SSF64167 11 256 8.63E-87 T 14-10-2018 DA442_14465 fd6494c03d85e4a3bce31443e5077770 258 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 11 257 41.08 T 14-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 DA442_02145 cb79376b453c50df34d8354fac718c7f 227 Pfam PF16537 Type II secretion system protein B 162 221 5.8E-25 T 14-10-2018 IPR032389 Type II secretion system protein B DA442_12655 a4c8a77b4a730a15dbd17e5350b61dd0 136 Gene3D G3DSA:3.40.630.30 3 132 1.1E-26 T 14-10-2018 DA442_12655 a4c8a77b4a730a15dbd17e5350b61dd0 136 Pfam PF13508 Acetyltransferase (GNAT) domain 55 119 1.6E-7 T 14-10-2018 IPR000182 GNAT domain DA442_12655 a4c8a77b4a730a15dbd17e5350b61dd0 136 SUPERFAMILY SSF55729 13 123 5.95E-15 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_13920 01af59fcab5f09ea737b9502c1d2e447 112 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 2.0E-44 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 DA442_13920 01af59fcab5f09ea737b9502c1d2e447 112 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 2.0E-44 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 DA442_13920 01af59fcab5f09ea737b9502c1d2e447 112 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 2.0E-44 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 DA442_13920 01af59fcab5f09ea737b9502c1d2e447 112 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 2.0E-44 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 DA442_13920 01af59fcab5f09ea737b9502c1d2e447 112 Pfam PF03840 Preprotein translocase SecG subunit 4 71 6.2E-22 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 DA442_13920 01af59fcab5f09ea737b9502c1d2e447 112 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 4.6E-25 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 DA442_18560 c225f779e2675276116c33c98e5fce17 388 SUPERFAMILY SSF52172 4 127 1.15E-21 T 14-10-2018 IPR011006 CheY-like superfamily DA442_18560 c225f779e2675276116c33c98e5fce17 388 Pfam PF00072 Response regulator receiver domain 7 119 8.8E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_18560 c225f779e2675276116c33c98e5fce17 388 Pfam PF00563 EAL domain 148 374 1.8E-66 T 14-10-2018 IPR001633 EAL domain DA442_18560 c225f779e2675276116c33c98e5fce17 388 Gene3D G3DSA:3.40.50.2300 4 133 4.5E-23 T 14-10-2018 DA442_18560 c225f779e2675276116c33c98e5fce17 388 SMART SM00052 137 379 1.8E-66 T 14-10-2018 IPR001633 EAL domain DA442_18560 c225f779e2675276116c33c98e5fce17 388 SMART SM00448 5 121 9.7E-10 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_18560 c225f779e2675276116c33c98e5fce17 388 Gene3D G3DSA:3.20.20.450 137 382 5.8E-76 T 14-10-2018 IPR035919 EAL domain superfamily DA442_18560 c225f779e2675276116c33c98e5fce17 388 SUPERFAMILY SSF141868 144 382 7.19E-73 T 14-10-2018 IPR035919 EAL domain superfamily DA442_17360 9da533446a05e7a5f23ff7d7e6d36f14 270 Pfam PF07070 SpoOM protein 6 221 4.1E-77 T 14-10-2018 IPR009776 Sporulation stage 0, protein M DA442_15845 29acd69719a5da366fe6e71805de4e20 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 5.7E-11 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DA442_15845 29acd69719a5da366fe6e71805de4e20 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 5.7E-11 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DA442_15845 29acd69719a5da366fe6e71805de4e20 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 8.8E-16 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DA442_15845 29acd69719a5da366fe6e71805de4e20 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 7.0E-23 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain DA442_15845 29acd69719a5da366fe6e71805de4e20 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 14-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site DA442_15845 29acd69719a5da366fe6e71805de4e20 210 Gene3D G3DSA:2.60.120.10 10 138 3.0E-43 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DA442_15845 29acd69719a5da366fe6e71805de4e20 210 SUPERFAMILY SSF51206 8 137 7.33E-35 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like DA442_15845 29acd69719a5da366fe6e71805de4e20 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 14-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site DA442_15845 29acd69719a5da366fe6e71805de4e20 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 14-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 DA442_15845 29acd69719a5da366fe6e71805de4e20 210 SMART SM00419 160 208 4.2E-17 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DA442_15845 29acd69719a5da366fe6e71805de4e20 210 Gene3D G3DSA:1.10.10.10 139 207 1.0E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_15845 29acd69719a5da366fe6e71805de4e20 210 SUPERFAMILY SSF46785 139 207 3.88E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_15845 29acd69719a5da366fe6e71805de4e20 210 SMART SM00100 2 122 3.7E-27 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain DA442_21455 c1e97e09001ab0fe1bf346d27a98ac99 466 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 24 466 5.6E-172 T 14-10-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 DA442_21455 c1e97e09001ab0fe1bf346d27a98ac99 466 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 21 466 7.0E-154 T 14-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase DA442_21455 c1e97e09001ab0fe1bf346d27a98ac99 466 Pfam PF02397 Bacterial sugar transferase 276 458 6.8E-67 T 14-10-2018 IPR003362 Bacterial sugar transferase DA442_21455 c1e97e09001ab0fe1bf346d27a98ac99 466 Pfam PF13727 CoA-binding domain 66 240 3.0E-39 T 14-10-2018 DA442_21455 c1e97e09001ab0fe1bf346d27a98ac99 466 Gene3D G3DSA:3.40.50.720 141 264 4.2E-12 T 14-10-2018 DA442_21455 c1e97e09001ab0fe1bf346d27a98ac99 466 SUPERFAMILY SSF51735 143 269 1.14E-5 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_10365 55171b04de2aba1ae13dce93028f814f 45 Pfam PF11665 Protein of unknown function (DUF3265) 18 45 1.3E-13 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_03630 fcdce20fb519505667b4454bbcbf9142 183 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 4 178 1.7E-79 T 14-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 DA442_03630 fcdce20fb519505667b4454bbcbf9142 183 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 5 154 2.3E-35 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 DA442_03630 fcdce20fb519505667b4454bbcbf9142 183 SUPERFAMILY SSF56784 4 182 2.13E-48 T 14-10-2018 IPR036412 HAD-like superfamily DA442_03630 fcdce20fb519505667b4454bbcbf9142 183 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 152 1.2E-38 T 14-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 DA442_03630 fcdce20fb519505667b4454bbcbf9142 183 Gene3D G3DSA:3.40.50.1000 2 183 6.7E-61 T 14-10-2018 IPR023214 HAD superfamily DA442_03630 fcdce20fb519505667b4454bbcbf9142 183 Pfam PF13242 HAD-hyrolase-like 107 176 6.9E-13 T 14-10-2018 DA442_03630 fcdce20fb519505667b4454bbcbf9142 183 PIRSF PIRSF004682 1 183 3.6E-63 T 14-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 DA442_15965 8771d4fba3dfdc5339ee9fa8f4d9097a 87 Gene3D G3DSA:2.30.30.100 1 72 4.7E-35 T 14-10-2018 DA442_15965 8771d4fba3dfdc5339ee9fa8f4d9097a 87 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.727 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 DA442_15965 8771d4fba3dfdc5339ee9fa8f4d9097a 87 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 6.8E-30 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 DA442_15965 8771d4fba3dfdc5339ee9fa8f4d9097a 87 Pfam PF17209 Hfq protein 7 69 1.7E-31 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 DA442_15965 8771d4fba3dfdc5339ee9fa8f4d9097a 87 SUPERFAMILY SSF50182 7 69 1.19E-24 T 14-10-2018 IPR010920 LSM domain superfamily DA442_22240 f9372ecf66b13606f4922a1466ea0f05 71 Pfam PF09493 Tryptophan-rich protein (DUF2389) 12 71 1.1E-23 T 14-10-2018 IPR012663 Conserved hypothetical protein CHP02450, tryptophan-rich DA442_22240 f9372ecf66b13606f4922a1466ea0f05 71 TIGRFAM TIGR02450 TIGR02450: tryptophan-rich conserved hypothetical protein 10 71 5.3E-28 T 14-10-2018 IPR012663 Conserved hypothetical protein CHP02450, tryptophan-rich DA442_05200 e43e551ddd233f7ae97620a55caf641f 758 PIRSF PIRSF000379 5 758 0.0 T 14-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 DA442_05200 e43e551ddd233f7ae97620a55caf641f 758 Pfam PF01228 Glycine radical 628 739 2.6E-43 T 14-10-2018 IPR001150 Glycine radical domain GO:0003824 DA442_05200 e43e551ddd233f7ae97620a55caf641f 758 Gene3D G3DSA:3.20.70.20 1 758 0.0 T 14-10-2018 DA442_05200 e43e551ddd233f7ae97620a55caf641f 758 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 8 758 0.0 T 14-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 DA442_05200 e43e551ddd233f7ae97620a55caf641f 758 Pfam PF02901 Pyruvate formate lyase-like 21 612 9.4E-207 T 14-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 DA442_05200 e43e551ddd233f7ae97620a55caf641f 758 ProSitePatterns PS00850 Glycine radical domain signature. 728 736 - T 14-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site DA442_05200 e43e551ddd233f7ae97620a55caf641f 758 SUPERFAMILY SSF51998 4 757 3.89E-290 T 14-10-2018 DA442_17470 290a42e321761010836e7268c9b99711 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 5.5E-14 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DA442_17470 290a42e321761010836e7268c9b99711 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 2.3E-251 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_17470 290a42e321761010836e7268c9b99711 513 SUPERFAMILY SSF52540 96 381 7.31E-94 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_17470 290a42e321761010836e7268c9b99711 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 1.5E-44 T 14-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_17470 290a42e321761010836e7268c9b99711 513 Gene3D G3DSA:1.20.150.20 383 513 2.6E-48 T 14-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_17470 290a42e321761010836e7268c9b99711 513 SUPERFAMILY SSF47917 383 511 8.63E-46 T 14-10-2018 DA442_17470 290a42e321761010836e7268c9b99711 513 SUPERFAMILY SSF50615 10 94 5.1E-26 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DA442_17470 290a42e321761010836e7268c9b99711 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 2.3E-71 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DA442_17470 290a42e321761010836e7268c9b99711 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 49.733 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_17470 290a42e321761010836e7268c9b99711 513 Gene3D G3DSA:2.40.30.20 1 93 5.3E-30 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DA442_17470 290a42e321761010836e7268c9b99711 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DA442_17470 290a42e321761010836e7268c9b99711 513 Gene3D G3DSA:3.40.50.300 94 382 2.2E-129 T 14-10-2018 DA442_20350 ca8f0005b8c7387f5726f11837e84343 157 SUPERFAMILY SSF82784 1 152 6.02E-48 T 14-10-2018 IPR036102 OsmC/Ohr superfamily DA442_20350 ca8f0005b8c7387f5726f11837e84343 157 Pfam PF02566 OsmC-like protein 55 151 6.1E-16 T 14-10-2018 IPR003718 OsmC/Ohr family DA442_20350 ca8f0005b8c7387f5726f11837e84343 157 Gene3D G3DSA:3.30.300.20 1 154 4.8E-48 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta DA442_18095 ac85399a6e5cb466ff5b84884469dc23 215 Pfam PF13417 Glutathione S-transferase, N-terminal domain 9 77 8.3E-10 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 DA442_18095 ac85399a6e5cb466ff5b84884469dc23 215 Gene3D G3DSA:1.20.1050.10 84 191 4.0E-56 T 14-10-2018 DA442_18095 ac85399a6e5cb466ff5b84884469dc23 215 SUPERFAMILY SSF52833 5 84 3.68E-15 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_18095 ac85399a6e5cb466ff5b84884469dc23 215 Gene3D G3DSA:3.40.30.10 5 195 4.0E-56 T 14-10-2018 DA442_18095 ac85399a6e5cb466ff5b84884469dc23 215 SUPERFAMILY SSF47616 83 201 4.6E-14 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DA442_02990 12083e79c80cf0a7343b78dcdd3dad0c 232 SUPERFAMILY SSF109755 10 225 1.05E-69 T 14-10-2018 DA442_02990 12083e79c80cf0a7343b78dcdd3dad0c 232 Pfam PF01895 PhoU domain 23 108 3.2E-23 T 14-10-2018 IPR026022 PhoU domain DA442_02990 12083e79c80cf0a7343b78dcdd3dad0c 232 Pfam PF01895 PhoU domain 128 210 2.1E-16 T 14-10-2018 IPR026022 PhoU domain DA442_02990 12083e79c80cf0a7343b78dcdd3dad0c 232 Gene3D G3DSA:1.20.58.220 2 117 5.6E-41 T 14-10-2018 IPR038078 PhoU-like domain superfamily DA442_02990 12083e79c80cf0a7343b78dcdd3dad0c 232 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 10 219 3.4E-75 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 DA442_02990 12083e79c80cf0a7343b78dcdd3dad0c 232 PIRSF PIRSF003107 4 223 7.4E-70 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 DA442_02990 12083e79c80cf0a7343b78dcdd3dad0c 232 Gene3D G3DSA:1.20.58.220 118 230 3.1E-34 T 14-10-2018 IPR038078 PhoU-like domain superfamily DA442_00895 f5558a7d6f7d3bf21214a1e690b330f3 608 Gene3D G3DSA:3.10.105.10 319 542 8.3E-40 T 14-10-2018 DA442_00895 f5558a7d6f7d3bf21214a1e690b330f3 608 SUPERFAMILY SSF53850 41 561 1.14E-93 T 14-10-2018 DA442_00895 f5558a7d6f7d3bf21214a1e690b330f3 608 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 90 484 2.6E-55 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain DA442_00895 f5558a7d6f7d3bf21214a1e690b330f3 608 Gene3D G3DSA:3.40.190.10 19 318 6.6E-46 T 14-10-2018 DA442_00895 f5558a7d6f7d3bf21214a1e690b330f3 608 PIRSF PIRSF002741 1 563 1.0E-66 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DA442_25185 90f3927a37a8c44c32bdb777b68b278a 142 SUPERFAMILY SSF54593 2 129 2.2E-17 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DA442_25185 90f3927a37a8c44c32bdb777b68b278a 142 Gene3D G3DSA:3.10.180.10 5 141 1.5E-12 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DA442_25185 90f3927a37a8c44c32bdb777b68b278a 142 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 126 1.1E-8 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DA442_14515 993ea75132375c6fd778896d75df424d 439 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 421 431 - T 14-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site DA442_14515 993ea75132375c6fd778896d75df424d 439 Gene3D G3DSA:2.40.50.140 1 88 1.1E-28 T 14-10-2018 DA442_14515 993ea75132375c6fd778896d75df424d 439 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 25 431 2.5E-130 T 14-10-2018 DA442_14515 993ea75132375c6fd778896d75df424d 439 SUPERFAMILY SSF50249 18 74 3.43E-13 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_14515 993ea75132375c6fd778896d75df424d 439 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 370 400 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site DA442_14515 993ea75132375c6fd778896d75df424d 439 SUPERFAMILY SSF53335 77 438 7.07E-86 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_14515 993ea75132375c6fd778896d75df424d 439 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 97 438 1.6E-34 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 DA442_14515 993ea75132375c6fd778896d75df424d 439 Gene3D G3DSA:3.40.50.150 89 433 2.0E-117 T 14-10-2018 DA442_14515 993ea75132375c6fd778896d75df424d 439 Gene3D G3DSA:3.40.1350.30 135 271 2.0E-117 T 14-10-2018 DA442_14515 993ea75132375c6fd778896d75df424d 439 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 19 439 64.29 T 14-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 DA442_14515 993ea75132375c6fd778896d75df424d 439 Pfam PF01938 TRAM domain 17 68 6.1E-8 T 14-10-2018 IPR002792 TRAM domain DA442_08505 ac8b4940993bd29b927e4919179e42c9 90 Pfam PF00708 Acylphosphatase 7 89 1.1E-25 T 14-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DA442_08505 ac8b4940993bd29b927e4919179e42c9 90 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 14-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DA442_08505 ac8b4940993bd29b927e4919179e42c9 90 SUPERFAMILY SSF54975 4 89 1.11E-28 T 14-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DA442_08505 ac8b4940993bd29b927e4919179e42c9 90 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 14-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DA442_08505 ac8b4940993bd29b927e4919179e42c9 90 Gene3D G3DSA:3.30.70.100 1 90 2.4E-31 T 14-10-2018 DA442_01430 2d175bb8a55ff69ba74ee7ff553af54c 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 12 197 2.4E-76 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01430 2d175bb8a55ff69ba74ee7ff553af54c 200 Gene3D G3DSA:3.40.1370.10 5 200 4.0E-70 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 DA442_01430 2d175bb8a55ff69ba74ee7ff553af54c 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 200 33.872 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01430 2d175bb8a55ff69ba74ee7ff553af54c 200 SUPERFAMILY SSF52166 9 199 4.06E-73 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 DA442_01430 2d175bb8a55ff69ba74ee7ff553af54c 200 Pfam PF00573 Ribosomal protein L4/L1 family 12 197 1.4E-65 T 14-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 DA442_11810 789d8f5f5cf96761e6245e662a686683 293 Gene3D G3DSA:3.30.1330.60 176 293 1.2E-39 T 14-10-2018 IPR036737 OmpA-like domain superfamily DA442_11810 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 148 167 1.1E-174 T 14-10-2018 DA442_11810 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 45 63 1.1E-174 T 14-10-2018 DA442_11810 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 66 84 1.1E-174 T 14-10-2018 DA442_11810 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 204 230 1.1E-174 T 14-10-2018 DA442_11810 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 233 250 1.1E-174 T 14-10-2018 DA442_11810 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 28 44 1.1E-174 T 14-10-2018 DA442_11810 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 123 145 1.1E-174 T 14-10-2018 DA442_11810 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 104 121 1.1E-174 T 14-10-2018 DA442_11810 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 251 270 1.1E-174 T 14-10-2018 DA442_11810 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 174 201 1.1E-174 T 14-10-2018 DA442_11810 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 3 27 1.1E-174 T 14-10-2018 DA442_11810 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 85 103 1.1E-174 T 14-10-2018 DA442_11810 789d8f5f5cf96761e6245e662a686683 293 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 271 291 1.1E-174 T 14-10-2018 DA442_11810 789d8f5f5cf96761e6245e662a686683 293 Gene3D G3DSA:2.60.40.2540 22 175 1.6E-58 T 14-10-2018 DA442_11810 789d8f5f5cf96761e6245e662a686683 293 Pfam PF00691 OmpA family 187 282 3.2E-19 T 14-10-2018 IPR006665 OmpA-like domain DA442_11810 789d8f5f5cf96761e6245e662a686683 293 ProSitePatterns PS01068 OmpA-like domain. 220 264 - T 14-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 DA442_11810 789d8f5f5cf96761e6245e662a686683 293 SUPERFAMILY SSF103088 158 287 1.16E-25 T 14-10-2018 IPR036737 OmpA-like domain superfamily DA442_17890 bed03a13ac5c9e02daaead5e32fe40fc 226 SUPERFAMILY SSF54637 77 221 4.26E-29 T 14-10-2018 IPR029069 HotDog domain superfamily DA442_17890 bed03a13ac5c9e02daaead5e32fe40fc 226 Gene3D G3DSA:3.10.129.10 75 225 3.4E-35 T 14-10-2018 DA442_17890 bed03a13ac5c9e02daaead5e32fe40fc 226 Pfam PF01575 MaoC like domain 84 201 8.7E-22 T 14-10-2018 IPR002539 MaoC-like dehydratase domain DA442_19710 7f92afe0b74479671429f48e6a1cde5e 245 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 211 231 1.0E-5 T 14-10-2018 IPR024726 Ferric iron reductase, C-terminal GO:0051537 DA442_19710 7f92afe0b74479671429f48e6a1cde5e 245 TIGRFAM TIGR03950 sidero_Fe_reduc: siderophore ferric iron reductase, AHA_1954 family 9 231 8.2E-90 T 14-10-2018 IPR023998 Siderophore ferric iron reductase, AHA1954 family DA442_23465 e296901efedebeff84fecfb857a0ee7c 167 Pfam PF11012 Protein of unknown function (DUF2850) 59 137 7.6E-30 T 14-10-2018 IPR021271 Protein of unknown function DUF2850 DA442_17955 eb1890507a4157dea87bd29f5206cbb0 281 Pfam PF00378 Enoyl-CoA hydratase/isomerase 26 273 4.9E-44 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 DA442_17955 eb1890507a4157dea87bd29f5206cbb0 281 Gene3D G3DSA:3.90.226.10 14 215 1.4E-59 T 14-10-2018 DA442_17955 eb1890507a4157dea87bd29f5206cbb0 281 Gene3D G3DSA:1.10.12.10 217 279 3.2E-24 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal DA442_17955 eb1890507a4157dea87bd29f5206cbb0 281 SUPERFAMILY SSF52096 16 275 1.57E-67 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DA442_07340 192465d6827b315bb6f88f243523c6f2 167 Pfam PF13505 Outer membrane protein beta-barrel domain 9 167 2.9E-15 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel DA442_07340 192465d6827b315bb6f88f243523c6f2 167 SUPERFAMILY SSF56925 23 167 8.63E-22 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DA442_07340 192465d6827b315bb6f88f243523c6f2 167 Gene3D G3DSA:2.40.160.20 25 167 2.9E-33 T 14-10-2018 DA442_14795 9fb933e29602b573562b4960424eddee 143 Pfam PF14467 Domain of unknown function (DUF4426) 23 142 4.8E-49 T 14-10-2018 IPR025218 Domain of unknown function DUF4426 DA442_14795 9fb933e29602b573562b4960424eddee 143 Gene3D G3DSA:2.60.40.3340 14 143 2.5E-41 T 14-10-2018 DA442_09825 0936e94e915d17a9fcc481fa25ed8a32 169 SUPERFAMILY SSF48452 47 146 1.18E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_09825 0936e94e915d17a9fcc481fa25ed8a32 169 Gene3D G3DSA:1.25.40.10 55 167 3.6E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_24740 780eacd3172938d8140eb3b21e64e2bc 129 Gene3D G3DSA:3.10.180.10 1 129 4.0E-30 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DA442_24740 780eacd3172938d8140eb3b21e64e2bc 129 SUPERFAMILY SSF54593 1 128 4.83E-23 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DA442_24740 780eacd3172938d8140eb3b21e64e2bc 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 127 1.4E-9 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DA442_23785 42b8142ae72ba95daf197386c113eaa0 234 Pfam PF07963 Prokaryotic N-terminal methylation motif 53 77 2.0E-4 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DA442_11400 10a7b8e335c552f73a67dd9aa0f57c58 230 SUPERFAMILY SSF52540 49 159 1.17E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_11400 10a7b8e335c552f73a67dd9aa0f57c58 230 PIRSF PIRSF037290 1 230 4.5E-80 T 14-10-2018 IPR017166 Uncharacterised conserved protein UCP037290 DA442_11400 10a7b8e335c552f73a67dd9aa0f57c58 230 Gene3D G3DSA:3.40.50.300 52 158 2.4E-27 T 14-10-2018 DA442_11400 10a7b8e335c552f73a67dd9aa0f57c58 230 Pfam PF00154 recA bacterial DNA recombination protein 29 125 1.3E-5 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DA442_06140 fb1c659e30f9bf4baed9616333cb7778 386 SUPERFAMILY SSF53850 38 384 9.06E-40 T 14-10-2018 DA442_06140 fb1c659e30f9bf4baed9616333cb7778 386 Pfam PF13416 Bacterial extracellular solute-binding protein 61 353 1.0E-21 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein DA442_06140 fb1c659e30f9bf4baed9616333cb7778 386 PIRSF PIRSF029172 1 386 3.0E-178 T 14-10-2018 IPR027020 Protein ynjB DA442_06140 fb1c659e30f9bf4baed9616333cb7778 386 Gene3D G3DSA:3.40.190.10 74 359 1.1E-14 T 14-10-2018 DA442_06140 fb1c659e30f9bf4baed9616333cb7778 386 Gene3D G3DSA:3.40.190.10 158 383 1.1E-14 T 14-10-2018 DA442_21845 bcba26cc16e0e76e97f417b12ff934a4 182 Pfam PF07155 ECF-type riboflavin transporter, S component 3 171 8.8E-44 T 14-10-2018 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 DA442_21845 bcba26cc16e0e76e97f417b12ff934a4 182 Hamap MF_01572 UPF0397 protein . 1 182 21.259 T 14-10-2018 IPR022914 Protein of unknown function UPF0397 DA442_21845 bcba26cc16e0e76e97f417b12ff934a4 182 Gene3D G3DSA:1.10.1760.20 1 177 4.9E-19 T 14-10-2018 DA442_17690 da1ba1981f4346ac4257fcb1cbf1f13a 409 Pfam PF02687 FtsX-like permease family 292 396 8.2E-11 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DA442_17690 da1ba1981f4346ac4257fcb1cbf1f13a 409 Pfam PF12704 MacB-like periplasmic core domain 17 206 6.9E-11 T 14-10-2018 IPR025857 MacB-like periplasmic core domain DA442_03190 0c0dc76dc3e09bff7a447f1f320933b6 443 Pfam PF02601 Exonuclease VII, large subunit 126 440 5.2E-103 T 14-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 DA442_03190 0c0dc76dc3e09bff7a447f1f320933b6 443 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 356 6.2E-135 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 DA442_03190 0c0dc76dc3e09bff7a447f1f320933b6 443 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 443 31.271 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 DA442_03190 0c0dc76dc3e09bff7a447f1f320933b6 443 Pfam PF13742 OB-fold nucleic acid binding domain 10 103 5.9E-30 T 14-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 DA442_02805 cf3d46660b00b9ce8a783680bc3099a8 333 Gene3D G3DSA:2.70.70.10 120 276 1.9E-41 T 14-10-2018 IPR011055 Duplicated hybrid motif DA442_02805 cf3d46660b00b9ce8a783680bc3099a8 333 SUPERFAMILY SSF51261 77 272 7.98E-52 T 14-10-2018 IPR011055 Duplicated hybrid motif DA442_02805 cf3d46660b00b9ce8a783680bc3099a8 333 Pfam PF01551 Peptidase family M23 174 269 3.5E-29 T 14-10-2018 IPR016047 Peptidase M23 DA442_19130 6b81d4d0eac0a0bf5550f9611d90db1e 189 SUPERFAMILY SSF101874 23 188 7.19E-50 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily DA442_19130 6b81d4d0eac0a0bf5550f9611d90db1e 189 Hamap MF_00780 Protein YceI [yceI]. 1 189 44.932 T 14-10-2018 IPR023480 Uncharacterised protein family UPF0312/YceI DA442_19130 6b81d4d0eac0a0bf5550f9611d90db1e 189 Pfam PF04264 YceI-like domain 25 183 1.5E-36 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like DA442_19130 6b81d4d0eac0a0bf5550f9611d90db1e 189 Gene3D G3DSA:2.40.128.110 23 189 7.6E-50 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily DA442_19130 6b81d4d0eac0a0bf5550f9611d90db1e 189 SMART SM00867 24 187 6.9E-64 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like DA442_07420 40e1c392183b402f2e8fd286bf82e684 95 SUPERFAMILY SSF54909 4 81 1.53E-13 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel DA442_07420 40e1c392183b402f2e8fd286bf82e684 95 Pfam PF03992 Antibiotic biosynthesis monooxygenase 10 69 4.2E-6 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain DA442_07420 40e1c392183b402f2e8fd286bf82e684 95 Gene3D G3DSA:3.30.70.100 5 90 2.7E-10 T 14-10-2018 DA442_20860 7f72e0fe3afee1fee45192ab4854ade5 208 Gene3D G3DSA:3.40.50.12740 2 203 9.7E-66 T 14-10-2018 DA442_20860 7f72e0fe3afee1fee45192ab4854ade5 208 SMART SM00448 2 115 2.6E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_20860 7f72e0fe3afee1fee45192ab4854ade5 208 SUPERFAMILY SSF52172 3 132 7.54E-34 T 14-10-2018 IPR011006 CheY-like superfamily DA442_20860 7f72e0fe3afee1fee45192ab4854ade5 208 ProSitePatterns PS00622 LuxR-type HTH domain signature. 160 187 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_20860 7f72e0fe3afee1fee45192ab4854ade5 208 SUPERFAMILY SSF46894 128 202 8.5E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DA442_20860 7f72e0fe3afee1fee45192ab4854ade5 208 Pfam PF00196 Bacterial regulatory proteins, luxR family 144 199 4.1E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_20860 7f72e0fe3afee1fee45192ab4854ade5 208 SMART SM00421 143 200 8.6E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_20860 7f72e0fe3afee1fee45192ab4854ade5 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 4.6E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_20860 7f72e0fe3afee1fee45192ab4854ade5 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 4.6E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_20860 7f72e0fe3afee1fee45192ab4854ade5 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 4.6E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_20860 7f72e0fe3afee1fee45192ab4854ade5 208 Pfam PF00072 Response regulator receiver domain 4 115 1.3E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_11210 ac66cb30e66d700f813beb109305865d 239 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_11210 ac66cb30e66d700f813beb109305865d 239 SMART SM00382 35 222 6.2E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_11210 ac66cb30e66d700f813beb109305865d 239 Pfam PF00005 ABC transporter 26 174 4.7E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_11210 ac66cb30e66d700f813beb109305865d 239 Gene3D G3DSA:3.40.50.300 4 233 3.3E-72 T 14-10-2018 DA442_11210 ac66cb30e66d700f813beb109305865d 239 SUPERFAMILY SSF52540 6 227 9.96E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_03590 5ad4792f2ff091246f4ec18f1efb0e81 760 Gene3D G3DSA:1.25.40.10 242 454 1.7E-20 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_03590 5ad4792f2ff091246f4ec18f1efb0e81 760 SMART SM00028 254 287 27.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_03590 5ad4792f2ff091246f4ec18f1efb0e81 760 SMART SM00028 88 121 28.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_03590 5ad4792f2ff091246f4ec18f1efb0e81 760 SMART SM00028 294 327 0.054 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_03590 5ad4792f2ff091246f4ec18f1efb0e81 760 SMART SM00028 334 367 14.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_03590 5ad4792f2ff091246f4ec18f1efb0e81 760 SMART SM00028 416 449 420.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_03590 5ad4792f2ff091246f4ec18f1efb0e81 760 SUPERFAMILY SSF48452 258 456 1.94E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_03590 5ad4792f2ff091246f4ec18f1efb0e81 760 Gene3D G3DSA:1.25.40.10 71 241 8.7E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_03590 5ad4792f2ff091246f4ec18f1efb0e81 760 SUPERFAMILY SSF48452 83 234 4.17E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_11225 5ed9081896b27d5830f7a77dca7f3221 423 Gene3D G3DSA:1.20.1600.10 26 423 7.0E-79 T 14-10-2018 DA442_11225 5ed9081896b27d5830f7a77dca7f3221 423 SUPERFAMILY SSF56954 6 412 4.45E-78 T 14-10-2018 DA442_11225 5ed9081896b27d5830f7a77dca7f3221 423 Pfam PF02321 Outer membrane efflux protein 229 407 1.2E-26 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DA442_11225 5ed9081896b27d5830f7a77dca7f3221 423 Pfam PF02321 Outer membrane efflux protein 28 204 3.9E-27 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DA442_20595 8188868b3b91a3354db2f1ef6a3906aa 337 Pfam PF03466 LysR substrate binding domain 110 314 8.5E-40 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_20595 8188868b3b91a3354db2f1ef6a3906aa 337 SUPERFAMILY SSF53850 111 318 1.43E-44 T 14-10-2018 DA442_20595 8188868b3b91a3354db2f1ef6a3906aa 337 Gene3D G3DSA:1.10.10.10 24 110 4.5E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_20595 8188868b3b91a3354db2f1ef6a3906aa 337 Gene3D G3DSA:3.40.190.290 112 315 6.6E-59 T 14-10-2018 DA442_20595 8188868b3b91a3354db2f1ef6a3906aa 337 SUPERFAMILY SSF46785 21 133 6.39E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_20595 8188868b3b91a3354db2f1ef6a3906aa 337 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 83 6.6E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_13550 391f57a3e16999ce369b4aabf22bbff3 319 SMART SM00382 62 216 0.0028 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_13550 391f57a3e16999ce369b4aabf22bbff3 319 Pfam PF07728 AAA domain (dynein-related subfamily) 67 186 4.5E-19 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 DA442_13550 391f57a3e16999ce369b4aabf22bbff3 319 SUPERFAMILY SSF52540 32 284 3.5E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_13550 391f57a3e16999ce369b4aabf22bbff3 319 Gene3D G3DSA:3.40.50.300 47 223 7.8E-26 T 14-10-2018 DA442_13550 391f57a3e16999ce369b4aabf22bbff3 319 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 219 311 3.9E-23 T 14-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal DA442_04540 52c8dd83b42870efa8efc7b921b9764f 185 Pfam PF03843 Outer membrane lipoprotein Slp family 17 163 1.1E-44 T 14-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 DA442_04540 52c8dd83b42870efa8efc7b921b9764f 185 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 9 155 2.8E-35 T 14-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 DA442_04540 52c8dd83b42870efa8efc7b921b9764f 185 PIRSF PIRSF004982 2 185 2.5E-62 T 14-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 DA442_22545 0387e94ca90ed350cfcd2d9131788f44 204 Gene3D G3DSA:3.40.30.10 25 198 8.9E-36 T 14-10-2018 DA442_22545 0387e94ca90ed350cfcd2d9131788f44 204 Pfam PF02630 SCO1/SenC 28 177 1.0E-29 T 14-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_22545 0387e94ca90ed350cfcd2d9131788f44 204 SUPERFAMILY SSF52833 43 195 6.04E-36 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_15730 13bdf0f2ca82a8f29c573001058f196e 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.8E-14 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DA442_15730 13bdf0f2ca82a8f29c573001058f196e 394 SUPERFAMILY SSF50447 205 301 3.73E-29 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DA442_15730 13bdf0f2ca82a8f29c573001058f196e 394 Gene3D G3DSA:2.40.30.10 206 334 1.8E-52 T 14-10-2018 DA442_15730 13bdf0f2ca82a8f29c573001058f196e 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 1.0E-15 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DA442_15730 13bdf0f2ca82a8f29c573001058f196e 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site DA442_15730 13bdf0f2ca82a8f29c573001058f196e 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 2.8E-33 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal DA442_15730 13bdf0f2ca82a8f29c573001058f196e 394 SUPERFAMILY SSF50465 298 393 1.61E-35 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DA442_15730 13bdf0f2ca82a8f29c573001058f196e 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 2.1E-58 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_15730 13bdf0f2ca82a8f29c573001058f196e 394 Gene3D G3DSA:2.40.30.10 338 393 7.4E-29 T 14-10-2018 DA442_15730 13bdf0f2ca82a8f29c573001058f196e 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.642 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DA442_15730 13bdf0f2ca82a8f29c573001058f196e 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 5.8E-231 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DA442_15730 13bdf0f2ca82a8f29c573001058f196e 394 Gene3D G3DSA:3.40.50.300 1 203 4.0E-70 T 14-10-2018 DA442_15730 13bdf0f2ca82a8f29c573001058f196e 394 SUPERFAMILY SSF52540 6 219 5.86E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_15730 13bdf0f2ca82a8f29c573001058f196e 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.7E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_15730 13bdf0f2ca82a8f29c573001058f196e 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.7E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_15730 13bdf0f2ca82a8f29c573001058f196e 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_15730 13bdf0f2ca82a8f29c573001058f196e 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.7E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_15730 13bdf0f2ca82a8f29c573001058f196e 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.7E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DA442_01260 4b4b3b5be0410a8b1cb08b10ed88d2cd 346 SUPERFAMILY SSF53756 68 340 1.02E-6 T 14-10-2018 DA442_01260 4b4b3b5be0410a8b1cb08b10ed88d2cd 346 Pfam PF13524 Glycosyl transferases group 1 249 338 6.6E-17 T 14-10-2018 DA442_15170 ca892d7100e074bdc15d0186497f0e86 95 Gene3D G3DSA:3.30.160.100 1 95 5.2E-39 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like DA442_15170 ca892d7100e074bdc15d0186497f0e86 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 4.6E-34 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 DA442_15170 ca892d7100e074bdc15d0186497f0e86 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 93 8.7E-29 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 DA442_15170 ca892d7100e074bdc15d0186497f0e86 95 SUPERFAMILY SSF69754 1 95 4.05E-35 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like DA442_05010 6e653d5b8449cac98c986c2c8470eee8 107 Gene3D G3DSA:3.30.70.20 2 103 9.7E-26 T 14-10-2018 DA442_05010 6e653d5b8449cac98c986c2c8470eee8 107 Pfam PF13187 4Fe-4S dicluster domain 8 55 7.2E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DA442_05010 6e653d5b8449cac98c986c2c8470eee8 107 SUPERFAMILY SSF54862 3 96 1.24E-22 T 14-10-2018 DA442_05010 6e653d5b8449cac98c986c2c8470eee8 107 Pfam PF11953 Domain of unknown function (DUF3470) 68 107 9.9E-17 T 14-10-2018 IPR022569 Ferredoxin, C-terminal DA442_05010 6e653d5b8449cac98c986c2c8470eee8 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 5.1E-11 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 DA442_05010 6e653d5b8449cac98c986c2c8470eee8 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 5.1E-11 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 DA442_05010 6e653d5b8449cac98c986c2c8470eee8 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 5.1E-11 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 DA442_07080 f117cd05f4c883108216bc9aabd1c770 111 Pfam PF07411 Domain of unknown function (DUF1508) 10 57 3.0E-24 T 14-10-2018 IPR010879 Domain of unknown function DUF1508 DA442_07080 f117cd05f4c883108216bc9aabd1c770 111 Pfam PF07411 Domain of unknown function (DUF1508) 63 108 1.9E-22 T 14-10-2018 IPR010879 Domain of unknown function DUF1508 DA442_07080 f117cd05f4c883108216bc9aabd1c770 111 Gene3D G3DSA:2.30.29.80 1 111 4.0E-50 T 14-10-2018 DA442_07080 f117cd05f4c883108216bc9aabd1c770 111 SUPERFAMILY SSF160113 1 57 1.7E-21 T 14-10-2018 IPR036913 YegP-like superfamily DA442_07080 f117cd05f4c883108216bc9aabd1c770 111 SUPERFAMILY SSF160113 55 108 2.75E-17 T 14-10-2018 IPR036913 YegP-like superfamily DA442_18050 d1ec72554e1c0919f5a35b59a2c21b1e 342 SUPERFAMILY SSF160935 9 325 8.11E-56 T 14-10-2018 DA442_18050 d1ec72554e1c0919f5a35b59a2c21b1e 342 Pfam PF06863 Protein of unknown function (DUF1254) 58 111 3.9E-6 T 14-10-2018 IPR010679 Domain of unknown function DUF1254 DA442_18050 d1ec72554e1c0919f5a35b59a2c21b1e 342 Gene3D G3DSA:2.60.120.1600 235 342 1.7E-10 T 14-10-2018 DA442_18050 d1ec72554e1c0919f5a35b59a2c21b1e 342 Pfam PF06742 Protein of unknown function (DUF1214) 259 325 6.9E-8 T 14-10-2018 IPR010621 Domain of unknown function DUF1214 DA442_09580 7842ad7c053f97f2dfc7a83c12933184 95 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 88 3.8E-14 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family DA442_09580 7842ad7c053f97f2dfc7a83c12933184 95 Gene3D G3DSA:3.30.2310.20 1 92 4.6E-16 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily DA442_19920 64262bf689c2333517e6007f62c8d99d 331 SUPERFAMILY SSF53187 37 330 7.28E-52 T 14-10-2018 DA442_19920 64262bf689c2333517e6007f62c8d99d 331 PIRSF PIRSF039012 9 331 4.2E-91 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 DA442_19920 64262bf689c2333517e6007f62c8d99d 331 Gene3D G3DSA:3.40.630.10 14 329 2.1E-70 T 14-10-2018 DA442_19920 64262bf689c2333517e6007f62c8d99d 331 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 56 329 7.5E-72 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 DA442_15330 3c803a10ff2df5dbd55efcce3f1c9fc6 281 SUPERFAMILY SSF52540 12 260 7.48E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_15330 3c803a10ff2df5dbd55efcce3f1c9fc6 281 Gene3D G3DSA:3.40.50.300 28 183 5.9E-13 T 14-10-2018 DA442_15330 3c803a10ff2df5dbd55efcce3f1c9fc6 281 Pfam PF13401 AAA domain 42 168 2.1E-23 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_11265 1af40d494edb0decb957b1cc4c2bc622 703 ProSitePatterns PS00194 Thioredoxin family active site. 606 624 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 DA442_11265 1af40d494edb0decb957b1cc4c2bc622 703 Gene3D G3DSA:3.40.30.10 584 689 9.4E-9 T 14-10-2018 DA442_11265 1af40d494edb0decb957b1cc4c2bc622 703 Pfam PF13899 Thioredoxin-like 587 673 2.2E-11 T 14-10-2018 DA442_11265 1af40d494edb0decb957b1cc4c2bc622 703 SUPERFAMILY SSF52833 579 673 1.94E-12 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_11265 1af40d494edb0decb957b1cc4c2bc622 703 Pfam PF11412 Disulphide bond corrector protein DsbC 58 164 4.0E-16 T 14-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain DA442_16535 d1df4768af981e416353ce230365e8c5 190 SMART SM00986 27 183 2.7E-31 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DA442_16535 d1df4768af981e416353ce230365e8c5 190 Pfam PF03167 Uracil DNA glycosylase superfamily 31 178 6.1E-27 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DA442_16535 d1df4768af981e416353ce230365e8c5 190 SMART SM00987 27 183 2.7E-31 T 14-10-2018 DA442_16535 d1df4768af981e416353ce230365e8c5 190 Gene3D G3DSA:3.40.470.10 1 190 1.4E-75 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DA442_16535 d1df4768af981e416353ce230365e8c5 190 SUPERFAMILY SSF52141 2 189 1.24E-58 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DA442_20935 17ea4a489c32a9aa629906d4d6150570 612 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 15 612 42.952 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 DA442_20935 17ea4a489c32a9aa629906d4d6150570 612 Gene3D G3DSA:3.30.70.3400 230 434 1.0E-46 T 14-10-2018 DA442_20935 17ea4a489c32a9aa629906d4d6150570 612 SUPERFAMILY SSF82866 407 604 1.06E-40 T 14-10-2018 DA442_20935 17ea4a489c32a9aa629906d4d6150570 612 Gene3D G3DSA:3.30.1360.200 288 428 1.0E-46 T 14-10-2018 DA442_20935 17ea4a489c32a9aa629906d4d6150570 612 Pfam PF07549 SecD/SecF GG Motif 128 150 2.1E-4 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site DA442_20935 17ea4a489c32a9aa629906d4d6150570 612 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 134 598 1.4E-131 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 DA442_20935 17ea4a489c32a9aa629906d4d6150570 612 Pfam PF13721 SecD export protein N-terminal TM region 14 110 3.4E-22 T 14-10-2018 IPR027398 SecD export protein N-terminal TM domain DA442_20935 17ea4a489c32a9aa629906d4d6150570 612 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 348 590 3.5E-73 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DA442_20935 17ea4a489c32a9aa629906d4d6150570 612 Pfam PF02355 Protein export membrane protein 430 598 5.0E-18 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial DA442_05505 2176b2dcf3ea0dbd3883c05aa0be11f4 232 TIGRFAM TIGR02796 tolQ: protein TolQ 6 220 3.0E-92 T 14-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 DA442_05505 2176b2dcf3ea0dbd3883c05aa0be11f4 232 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 5 225 43.791 T 14-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 DA442_05505 2176b2dcf3ea0dbd3883c05aa0be11f4 232 Pfam PF01618 MotA/TolQ/ExbB proton channel family 80 207 1.7E-42 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel DA442_04110 80e68b11842c5dc18288dd8d11b271f7 262 Pfam PF00460 Flagella basal body rod protein 5 35 3.6E-12 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 DA442_04110 80e68b11842c5dc18288dd8d11b271f7 262 SUPERFAMILY SSF117143 93 223 6.67E-35 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like DA442_04110 80e68b11842c5dc18288dd8d11b271f7 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site DA442_04110 80e68b11842c5dc18288dd8d11b271f7 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 147 244 1.6E-30 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G DA442_04110 80e68b11842c5dc18288dd8d11b271f7 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 137 5.4E-41 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G DA442_04110 80e68b11842c5dc18288dd8d11b271f7 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 184 260 9.1E-24 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DA442_04110 80e68b11842c5dc18288dd8d11b271f7 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 261 8.0E-118 T 14-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 DA442_13165 80b9c8aeffdd265e64f80b34a03d7766 284 Pfam PF00230 Major intrinsic protein 6 252 5.6E-63 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DA442_13165 80b9c8aeffdd265e64f80b34a03d7766 284 ProSitePatterns PS00221 MIP family signature. 68 76 - T 14-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 DA442_13165 80b9c8aeffdd265e64f80b34a03d7766 284 PRINTS PR00783 Major intrinsic protein family signature 153 171 3.2E-50 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DA442_13165 80b9c8aeffdd265e64f80b34a03d7766 284 PRINTS PR00783 Major intrinsic protein family signature 11 30 3.2E-50 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DA442_13165 80b9c8aeffdd265e64f80b34a03d7766 284 PRINTS PR00783 Major intrinsic protein family signature 87 106 3.2E-50 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DA442_13165 80b9c8aeffdd265e64f80b34a03d7766 284 PRINTS PR00783 Major intrinsic protein family signature 235 255 3.2E-50 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DA442_13165 80b9c8aeffdd265e64f80b34a03d7766 284 PRINTS PR00783 Major intrinsic protein family signature 186 208 3.2E-50 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DA442_13165 80b9c8aeffdd265e64f80b34a03d7766 284 PRINTS PR00783 Major intrinsic protein family signature 50 74 3.2E-50 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DA442_13165 80b9c8aeffdd265e64f80b34a03d7766 284 TIGRFAM TIGR00861 MIP: MIP family channel proteins 15 252 5.2E-68 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DA442_13165 80b9c8aeffdd265e64f80b34a03d7766 284 Gene3D G3DSA:1.20.1080.10 4 260 1.9E-95 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 DA442_13165 80b9c8aeffdd265e64f80b34a03d7766 284 SUPERFAMILY SSF81338 9 254 2.75E-74 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 DA442_11830 0b60ebc0ab293cf218b3edd91b7c51cf 441 Pfam PF13726 Na+-H+ antiporter family 2 88 9.9E-36 T 14-10-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal DA442_11830 0b60ebc0ab293cf218b3edd91b7c51cf 441 PRINTS PR00173 Glutamate-aspartate symporter signature 20 40 1.5E-6 T 14-10-2018 DA442_11830 0b60ebc0ab293cf218b3edd91b7c51cf 441 PRINTS PR00173 Glutamate-aspartate symporter signature 374 393 1.5E-6 T 14-10-2018 DA442_11830 0b60ebc0ab293cf218b3edd91b7c51cf 441 Pfam PF03553 Na+/H+ antiporter family 150 435 3.9E-75 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 DA442_11865 523cc49164674873ea66a8ecce6df97a 212 Pfam PF01914 MarC family integral membrane protein 8 208 6.7E-64 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 DA442_11865 523cc49164674873ea66a8ecce6df97a 212 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 3 204 4.4E-66 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 DA442_14430 d52db339efd8a4f8c686151a527973df 155 Gene3D G3DSA:1.10.10.10 58 101 2.5E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_14430 d52db339efd8a4f8c686151a527973df 155 Pfam PF02631 RecX family 34 151 2.9E-31 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 DA442_14430 d52db339efd8a4f8c686151a527973df 155 Gene3D G3DSA:1.10.10.10 11 52 6.5E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_14430 d52db339efd8a4f8c686151a527973df 155 Hamap MF_01114 Regulatory protein RecX [recX]. 7 155 13.93 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 DA442_14430 d52db339efd8a4f8c686151a527973df 155 Gene3D G3DSA:1.10.10.10 104 152 1.2E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_11510 95587b55f69179f04e04139a31e68f1b 307 SUPERFAMILY SSF52151 4 305 1.02E-82 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DA442_11510 95587b55f69179f04e04139a31e68f1b 307 SUPERFAMILY SSF55048 128 197 9.16E-19 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding DA442_11510 95587b55f69179f04e04139a31e68f1b 307 Gene3D G3DSA:3.30.70.250 125 197 4.8E-108 T 14-10-2018 DA442_11510 95587b55f69179f04e04139a31e68f1b 307 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 3.0E-127 T 14-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 DA442_11510 95587b55f69179f04e04139a31e68f1b 307 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 307 4.0E-45 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain DA442_11510 95587b55f69179f04e04139a31e68f1b 307 Pfam PF00698 Acyl transferase domain 7 291 2.8E-39 T 14-10-2018 IPR014043 Acyl transferase DA442_11510 95587b55f69179f04e04139a31e68f1b 307 Gene3D G3DSA:3.40.366.10 7 286 4.8E-108 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 DA442_11510 95587b55f69179f04e04139a31e68f1b 307 PIRSF PIRSF000446 1 307 6.2E-137 T 14-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 DA442_23830 a7bb845ceb7938ed068847c95226c4b4 204 Pfam PF02581 Thiamine monophosphate synthase 6 186 2.4E-64 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DA442_23830 a7bb845ceb7938ed068847c95226c4b4 204 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 5 197 4.4E-64 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DA442_23830 a7bb845ceb7938ed068847c95226c4b4 204 Gene3D G3DSA:3.20.20.70 1 204 1.3E-70 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_23830 a7bb845ceb7938ed068847c95226c4b4 204 SUPERFAMILY SSF51391 3 203 1.96E-66 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DA442_23830 a7bb845ceb7938ed068847c95226c4b4 204 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 4 204 27.503 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DA442_17415 73b3466414a1c1d4fae72d93040dbf16 312 Pfam PF01063 Amino-transferase class IV 36 268 3.7E-44 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 DA442_17415 73b3466414a1c1d4fae72d93040dbf16 312 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 223 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 DA442_17415 73b3466414a1c1d4fae72d93040dbf16 312 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 10 307 3.7E-142 T 14-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 DA442_17415 73b3466414a1c1d4fae72d93040dbf16 312 SUPERFAMILY SSF56752 7 307 2.09E-102 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 DA442_17415 73b3466414a1c1d4fae72d93040dbf16 312 Gene3D G3DSA:3.20.10.10 138 289 2.0E-106 T 14-10-2018 DA442_17415 73b3466414a1c1d4fae72d93040dbf16 312 Gene3D G3DSA:3.30.470.10 10 127 2.0E-106 T 14-10-2018 DA442_17625 9bdc294ff2a48eff440602f646deb821 245 PIRSF PIRSF039085 1 244 1.1E-105 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 DA442_17625 9bdc294ff2a48eff440602f646deb821 245 Gene3D G3DSA:3.40.50.300 1 243 2.1E-77 T 14-10-2018 DA442_17625 9bdc294ff2a48eff440602f646deb821 245 Pfam PF00005 ABC transporter 17 168 9.2E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_17625 9bdc294ff2a48eff440602f646deb821 245 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_17625 9bdc294ff2a48eff440602f646deb821 245 SMART SM00382 26 216 1.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_17625 9bdc294ff2a48eff440602f646deb821 245 SUPERFAMILY SSF52540 1 238 2.4E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_10970 d29cc56a68efeafb4e39878a188af74e 255 Gene3D G3DSA:3.30.460.10 7 96 4.6E-7 T 14-10-2018 DA442_10970 d29cc56a68efeafb4e39878a188af74e 255 SUPERFAMILY SSF81301 6 64 9.81E-8 T 14-10-2018 DA442_19800 c8570c335f5080dae5237bbc4256c0ba 262 Gene3D G3DSA:3.40.30.10 85 253 2.0E-58 T 14-10-2018 DA442_19800 c8570c335f5080dae5237bbc4256c0ba 262 SUPERFAMILY SSF52833 74 253 4.73E-42 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_19800 c8570c335f5080dae5237bbc4256c0ba 262 Gene3D G3DSA:1.10.40.80 139 198 2.0E-58 T 14-10-2018 DA442_19800 c8570c335f5080dae5237bbc4256c0ba 262 Pfam PF13462 Thioredoxin 83 229 2.7E-35 T 14-10-2018 IPR012336 Thioredoxin-like fold DA442_06905 952176985ae2d971278e7923a2717de9 306 Gene3D G3DSA:1.10.3720.10 84 301 6.2E-19 T 14-10-2018 IPR035906 MetI-like superfamily DA442_06905 952176985ae2d971278e7923a2717de9 306 SUPERFAMILY SSF161098 91 290 4.84E-17 T 14-10-2018 IPR035906 MetI-like superfamily DA442_06905 952176985ae2d971278e7923a2717de9 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 305 1.2E-37 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DA442_06545 94442c0988686d79a312f16e4aefb51d 416 Gene3D G3DSA:3.20.20.140 73 371 6.0E-158 T 14-10-2018 DA442_06545 94442c0988686d79a312f16e4aefb51d 416 Pfam PF01979 Amidohydrolase family 70 408 2.5E-14 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DA442_06545 94442c0988686d79a312f16e4aefb51d 416 Gene3D G3DSA:2.30.40.10 7 408 6.0E-158 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DA442_06545 94442c0988686d79a312f16e4aefb51d 416 Hamap MF_00372 Imidazolonepropionase [hutI]. 2 411 41.258 T 14-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DA442_06545 94442c0988686d79a312f16e4aefb51d 416 SUPERFAMILY SSF51556 72 371 2.1E-82 T 14-10-2018 IPR032466 Metal-dependent hydrolase DA442_06545 94442c0988686d79a312f16e4aefb51d 416 SUPERFAMILY SSF51338 1 412 1.53E-24 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DA442_06545 94442c0988686d79a312f16e4aefb51d 416 TIGRFAM TIGR01224 hutI: imidazolonepropionase 26 409 5.9E-149 T 14-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DA442_05820 00d178314ba1d6efd52a463da030d502 434 SUPERFAMILY SSF53613 31 417 1.77E-44 T 14-10-2018 IPR029056 Ribokinase-like DA442_05820 00d178314ba1d6efd52a463da030d502 434 Pfam PF00294 pfkB family carbohydrate kinase 77 292 1.1E-11 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB DA442_24265 6a47f971f3dc342dc429fc0b83ac2f36 132 SUPERFAMILY SSF82784 1 131 1.83E-39 T 14-10-2018 IPR036102 OsmC/Ohr superfamily DA442_24265 6a47f971f3dc342dc429fc0b83ac2f36 132 Pfam PF02566 OsmC-like protein 29 127 5.7E-17 T 14-10-2018 IPR003718 OsmC/Ohr family DA442_24265 6a47f971f3dc342dc429fc0b83ac2f36 132 Gene3D G3DSA:2.20.25.10 1 34 1.8E-20 T 14-10-2018 DA442_24265 6a47f971f3dc342dc429fc0b83ac2f36 132 Gene3D G3DSA:3.30.300.20 35 132 2.1E-24 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta DA442_15860 179a16c1356a0771f282490c6be1276c 339 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 337 2.0E-137 T 14-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 DA442_15860 179a16c1356a0771f282490c6be1276c 339 SUPERFAMILY SSF55729 1 338 5.04E-129 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_15860 179a16c1356a0771f282490c6be1276c 339 Gene3D G3DSA:2.40.40.20 277 339 1.3E-5 T 14-10-2018 DA442_15860 179a16c1356a0771f282490c6be1276c 339 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 338 2.5E-132 T 14-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 DA442_15860 179a16c1356a0771f282490c6be1276c 339 Gene3D G3DSA:3.40.630.30 1 274 3.2E-113 T 14-10-2018 DA442_15860 179a16c1356a0771f282490c6be1276c 339 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 338 5.1E-133 T 14-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 DA442_13605 848bbba5e09598a2ee5dfbe26c9e08e9 139 Gene3D G3DSA:2.10.109.10 39 139 2.6E-14 T 14-10-2018 DA442_13605 848bbba5e09598a2ee5dfbe26c9e08e9 139 Pfam PF10502 Signal peptidase, peptidase S26 49 139 1.4E-15 T 14-10-2018 IPR019533 Peptidase S26 DA442_13605 848bbba5e09598a2ee5dfbe26c9e08e9 139 SUPERFAMILY SSF51306 43 139 5.75E-18 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily DA442_13605 848bbba5e09598a2ee5dfbe26c9e08e9 139 ProSitePatterns PS00760 Signal peptidases I lysine active site. 56 68 - T 14-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 DA442_11475 e9d3e5db4c8712d847b216924da6aee6 320 Pfam PF13177 DNA polymerase III, delta subunit 11 164 2.7E-44 T 14-10-2018 DA442_11475 e9d3e5db4c8712d847b216924da6aee6 320 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 206 314 6.5E-20 T 14-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_11475 e9d3e5db4c8712d847b216924da6aee6 320 Gene3D G3DSA:3.40.50.300 3 167 2.3E-49 T 14-10-2018 DA442_11475 e9d3e5db4c8712d847b216924da6aee6 320 SUPERFAMILY SSF52540 2 179 6.69E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_11475 e9d3e5db4c8712d847b216924da6aee6 320 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 12 198 1.6E-64 T 14-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DA442_11475 e9d3e5db4c8712d847b216924da6aee6 320 SUPERFAMILY SSF48019 208 319 1.34E-13 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 DA442_09385 b317c9d9a80cc9559de842be34406c24 26 Pfam PF11665 Protein of unknown function (DUF3265) 3 26 4.1E-11 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_14295 73a97641593688f93041ce8f04c04469 182 Gene3D G3DSA:2.30.30.240 101 182 7.4E-31 T 14-10-2018 DA442_14295 73a97641593688f93041ce8f04c04469 182 SUPERFAMILY SSF50346 106 182 1.02E-19 T 14-10-2018 IPR011033 PRC-barrel-like superfamily DA442_14295 73a97641593688f93041ce8f04c04469 182 Pfam PF01782 RimM N-terminal domain 15 95 7.6E-25 T 14-10-2018 IPR002676 RimM, N-terminal GO:0006364 DA442_14295 73a97641593688f93041ce8f04c04469 182 Gene3D G3DSA:2.40.30.60 4 100 6.4E-33 T 14-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 DA442_14295 73a97641593688f93041ce8f04c04469 182 SUPERFAMILY SSF50447 13 100 9.18E-24 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DA442_14295 73a97641593688f93041ce8f04c04469 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 13 182 23.604 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 DA442_14295 73a97641593688f93041ce8f04c04469 182 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 14 182 7.3E-55 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 DA442_14295 73a97641593688f93041ce8f04c04469 182 Pfam PF05239 PRC-barrel domain 103 168 6.1E-11 T 14-10-2018 IPR027275 PRC-barrel domain DA442_03455 e5a7ceae8b07e08cda9e808a6667544b 154 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 153 37.91 T 14-10-2018 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 DA442_03455 e5a7ceae8b07e08cda9e808a6667544b 154 Gene3D G3DSA:3.40.50.2020 1 152 1.7E-41 T 14-10-2018 DA442_03455 e5a7ceae8b07e08cda9e808a6667544b 154 SUPERFAMILY SSF53271 5 146 8.95E-28 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like DA442_03455 e5a7ceae8b07e08cda9e808a6667544b 154 Pfam PF00156 Phosphoribosyl transferase domain 28 145 2.3E-13 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DA442_18885 6c43f8c29d665e9fa77ec1a2676a8a5c 126 Pfam PF01597 Glycine cleavage H-protein 5 125 7.5E-50 T 14-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate DA442_18885 6c43f8c29d665e9fa77ec1a2676a8a5c 126 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 125 3.9E-51 T 14-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 DA442_18885 6c43f8c29d665e9fa77ec1a2676a8a5c 126 SUPERFAMILY SSF51230 3 125 8.64E-46 T 14-10-2018 IPR011053 Single hybrid motif DA442_18885 6c43f8c29d665e9fa77ec1a2676a8a5c 126 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 2 124 41.615 T 14-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 DA442_18885 6c43f8c29d665e9fa77ec1a2676a8a5c 126 Gene3D G3DSA:2.40.50.100 1 126 3.7E-51 T 14-10-2018 DA442_20565 c2d53559a0f4e90d46d806b4d09070d8 125 Pfam PF02627 Carboxymuconolactone decarboxylase family 33 117 3.5E-22 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 DA442_20565 c2d53559a0f4e90d46d806b4d09070d8 125 SUPERFAMILY SSF69118 4 122 9.07E-36 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DA442_20565 c2d53559a0f4e90d46d806b4d09070d8 125 Gene3D G3DSA:1.20.1290.10 2 125 6.1E-41 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DA442_21600 a9df101e52c66df26650497584c151a2 232 SUPERFAMILY SSF46894 131 225 1.47E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DA442_21600 a9df101e52c66df26650497584c151a2 232 SMART SM00448 3 113 1.9E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_21600 a9df101e52c66df26650497584c151a2 232 SMART SM00862 148 224 7.8E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DA442_21600 a9df101e52c66df26650497584c151a2 232 SUPERFAMILY SSF52172 3 162 6.12E-36 T 14-10-2018 IPR011006 CheY-like superfamily DA442_21600 a9df101e52c66df26650497584c151a2 232 Pfam PF00072 Response regulator receiver domain 5 114 8.5E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_21600 a9df101e52c66df26650497584c151a2 232 Gene3D G3DSA:3.40.50.2300 1 123 9.0E-33 T 14-10-2018 DA442_21600 a9df101e52c66df26650497584c151a2 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 224 1.3E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DA442_21600 a9df101e52c66df26650497584c151a2 232 Gene3D G3DSA:1.10.10.10 124 232 3.2E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_13995 b5449d876a7c84697062bb6ffc8407b9 113 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 113 1.1E-36 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 DA442_13995 b5449d876a7c84697062bb6ffc8407b9 113 Pfam PF01521 Iron-sulphur cluster biosynthesis 8 108 1.2E-18 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 DA442_13995 b5449d876a7c84697062bb6ffc8407b9 113 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 94 111 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 DA442_13995 b5449d876a7c84697062bb6ffc8407b9 113 Gene3D G3DSA:2.60.300.12 7 113 3.2E-32 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 DA442_13995 b5449d876a7c84697062bb6ffc8407b9 113 SUPERFAMILY SSF89360 8 102 1.16E-29 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 DA442_13995 b5449d876a7c84697062bb6ffc8407b9 113 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 113 35.874 T 14-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 DA442_20445 3ad4b9960338705c66124121c79547df 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 6.4E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_20445 3ad4b9960338705c66124121c79547df 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 6.4E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_20445 3ad4b9960338705c66124121c79547df 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 6.4E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_20445 3ad4b9960338705c66124121c79547df 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 5.0E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_20445 3ad4b9960338705c66124121c79547df 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.0E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_20445 3ad4b9960338705c66124121c79547df 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 5.0E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_20445 3ad4b9960338705c66124121c79547df 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 5.0E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_20445 3ad4b9960338705c66124121c79547df 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 5.0E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_20445 3ad4b9960338705c66124121c79547df 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 5.0E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_20445 3ad4b9960338705c66124121c79547df 252 SUPERFAMILY SSF51735 1 252 2.82E-66 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_20445 3ad4b9960338705c66124121c79547df 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 198 1.7E-4 T 14-10-2018 DA442_20445 3ad4b9960338705c66124121c79547df 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DA442_20445 3ad4b9960338705c66124121c79547df 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 250 3.1E-51 T 14-10-2018 DA442_20445 3ad4b9960338705c66124121c79547df 252 Gene3D G3DSA:3.40.50.720 1 252 7.8E-71 T 14-10-2018 DA442_06830 2ef8855d353c424d8ebfc2afe05d9d36 357 Gene3D G3DSA:3.40.190.10 137 341 3.5E-119 T 14-10-2018 DA442_06830 2ef8855d353c424d8ebfc2afe05d9d36 357 Pfam PF13416 Bacterial extracellular solute-binding protein 46 318 1.4E-35 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein DA442_06830 2ef8855d353c424d8ebfc2afe05d9d36 357 SUPERFAMILY SSF53850 25 355 3.66E-60 T 14-10-2018 DA442_06830 2ef8855d353c424d8ebfc2afe05d9d36 357 Gene3D G3DSA:3.40.190.10 30 335 3.5E-119 T 14-10-2018 DA442_23875 318c4b41c0ee4d73a393e06d9d029061 447 Pfam PF01523 Putative modulator of DNA gyrase 24 312 6.3E-45 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 DA442_23875 318c4b41c0ee4d73a393e06d9d029061 447 SUPERFAMILY SSF111283 8 445 1.14E-95 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 DA442_23875 318c4b41c0ee4d73a393e06d9d029061 447 Gene3D G3DSA:3.30.2290.10 4 212 4.5E-35 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal DA442_15550 1e83e4bf0941380871e782408fbf3c84 358 Pfam PF00842 Alanine racemase, C-terminal domain 233 356 1.8E-42 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DA442_15550 1e83e4bf0941380871e782408fbf3c84 358 SUPERFAMILY SSF50621 226 357 2.96E-47 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DA442_15550 1e83e4bf0941380871e782408fbf3c84 358 TIGRFAM TIGR00492 alr: alanine racemase 4 356 8.3E-129 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DA442_15550 1e83e4bf0941380871e782408fbf3c84 358 SUPERFAMILY SSF51419 8 234 1.57E-70 T 14-10-2018 IPR029066 PLP-binding barrel DA442_15550 1e83e4bf0941380871e782408fbf3c84 358 SMART SM01005 233 357 1.6E-67 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DA442_15550 1e83e4bf0941380871e782408fbf3c84 358 PRINTS PR00992 Alanine racemase signature 26 42 8.6E-70 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DA442_15550 1e83e4bf0941380871e782408fbf3c84 358 PRINTS PR00992 Alanine racemase signature 120 132 8.6E-70 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DA442_15550 1e83e4bf0941380871e782408fbf3c84 358 PRINTS PR00992 Alanine racemase signature 287 304 8.6E-70 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DA442_15550 1e83e4bf0941380871e782408fbf3c84 358 PRINTS PR00992 Alanine racemase signature 249 264 8.6E-70 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DA442_15550 1e83e4bf0941380871e782408fbf3c84 358 PRINTS PR00992 Alanine racemase signature 266 281 8.6E-70 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DA442_15550 1e83e4bf0941380871e782408fbf3c84 358 PRINTS PR00992 Alanine racemase signature 339 352 8.6E-70 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DA442_15550 1e83e4bf0941380871e782408fbf3c84 358 PRINTS PR00992 Alanine racemase signature 60 78 8.6E-70 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DA442_15550 1e83e4bf0941380871e782408fbf3c84 358 PRINTS PR00992 Alanine racemase signature 155 166 8.6E-70 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DA442_15550 1e83e4bf0941380871e782408fbf3c84 358 PRINTS PR00992 Alanine racemase signature 192 219 8.6E-70 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DA442_15550 1e83e4bf0941380871e782408fbf3c84 358 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 14-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DA442_15550 1e83e4bf0941380871e782408fbf3c84 358 Gene3D G3DSA:3.20.20.10 10 217 2.1E-132 T 14-10-2018 IPR029066 PLP-binding barrel DA442_15550 1e83e4bf0941380871e782408fbf3c84 358 Gene3D G3DSA:2.40.37.10 8 352 2.1E-132 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DA442_15550 1e83e4bf0941380871e782408fbf3c84 358 Hamap MF_01201 Alanine racemase. 1 357 34.764 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DA442_15550 1e83e4bf0941380871e782408fbf3c84 358 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 3.7E-70 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DA442_20605 204ea30ec5eb4aa70097c732654f1349 400 Pfam PF00501 AMP-binding enzyme 121 275 2.4E-13 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DA442_20605 204ea30ec5eb4aa70097c732654f1349 400 SUPERFAMILY SSF56801 116 339 1.31E-31 T 14-10-2018 DA442_20605 204ea30ec5eb4aa70097c732654f1349 400 Gene3D G3DSA:3.40.50.12780 2 316 4.9E-61 T 14-10-2018 DA442_10010 19fd90b577c86a490588bd208539f04d 112 SUPERFAMILY SSF51316 4 95 1.04E-15 T 14-10-2018 IPR011057 Mss4-like superfamily DA442_10010 19fd90b577c86a490588bd208539f04d 112 Gene3D G3DSA:2.170.150.70 1 110 2.6E-17 T 14-10-2018 DA442_01560 50342edb4e15bd3a820fd3e7a1605937 159 Pfam PF11075 Protein of unknown function VcgC/VcgE (DUF2780) 39 152 4.7E-29 T 14-10-2018 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE DA442_16650 e99f1af1ea3eb3f8c22827c7f36f19bf 152 SUPERFAMILY SSF55729 5 119 6.07E-12 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_16650 e99f1af1ea3eb3f8c22827c7f36f19bf 152 Gene3D G3DSA:3.40.630.30 16 138 1.5E-10 T 14-10-2018 DA442_16650 e99f1af1ea3eb3f8c22827c7f36f19bf 152 Pfam PF13673 Acetyltransferase (GNAT) domain 34 118 9.8E-7 T 14-10-2018 IPR000182 GNAT domain DA442_13355 5915746e2e4ce715afe83fbb235d212e 251 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 232 248 4.9E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DA442_13355 5915746e2e4ce715afe83fbb235d212e 251 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 217 232 4.9E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DA442_13355 5915746e2e4ce715afe83fbb235d212e 251 SUPERFAMILY SSF46689 201 250 2.96E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_13355 5915746e2e4ce715afe83fbb235d212e 251 Gene3D G3DSA:1.10.10.60 197 251 1.6E-20 T 14-10-2018 DA442_13355 5915746e2e4ce715afe83fbb235d212e 251 Pfam PF12833 Helix-turn-helix domain 171 250 4.2E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_13355 5915746e2e4ce715afe83fbb235d212e 251 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 201 244 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DA442_13355 5915746e2e4ce715afe83fbb235d212e 251 Gene3D G3DSA:1.10.10.60 147 196 1.3E-11 T 14-10-2018 DA442_13355 5915746e2e4ce715afe83fbb235d212e 251 SMART SM00342 164 248 6.9E-26 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_13355 5915746e2e4ce715afe83fbb235d212e 251 SUPERFAMILY SSF46689 152 197 1.79E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_23115 ce191bb7ac9ec05aa3f4414db81c520d 197 Gene3D G3DSA:2.30.30.60 124 176 1.9E-7 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily DA442_23115 ce191bb7ac9ec05aa3f4414db81c520d 197 Pfam PF00924 Mechanosensitive ion channel 75 174 7.3E-12 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 DA442_23115 ce191bb7ac9ec05aa3f4414db81c520d 197 SUPERFAMILY SSF50182 109 175 7.52E-12 T 14-10-2018 IPR010920 LSM domain superfamily DA442_17480 82e9e9accf0408f8b54babd4f81fdf07 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 13.623 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 DA442_17480 82e9e9accf0408f8b54babd4f81fdf07 156 SUPERFAMILY SSF81573 63 121 6.67E-15 T 14-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily DA442_17480 82e9e9accf0408f8b54babd4f81fdf07 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 2.9E-60 T 14-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 DA442_17480 82e9e9accf0408f8b54babd4f81fdf07 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 7.3E-37 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 DA442_17480 82e9e9accf0408f8b54babd4f81fdf07 156 Gene3D G3DSA:1.20.5.620 62 122 1.2E-23 T 14-10-2018 DA442_21635 2df383105e27ab76013df0f998655a40 289 SUPERFAMILY SSF50182 96 169 5.23E-10 T 14-10-2018 IPR010920 LSM domain superfamily DA442_21635 2df383105e27ab76013df0f998655a40 289 Pfam PF00924 Mechanosensitive ion channel 59 184 9.8E-16 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 DA442_24395 96fc065cde48475df88d007d57d0d4cc 459 SUPERFAMILY SSF53383 57 450 1.31E-105 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_24395 96fc065cde48475df88d007d57d0d4cc 459 Gene3D G3DSA:3.90.1150.10 61 444 1.2E-117 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DA442_24395 96fc065cde48475df88d007d57d0d4cc 459 Pfam PF00202 Aminotransferase class-III 57 449 4.6E-85 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DA442_24395 96fc065cde48475df88d007d57d0d4cc 459 Gene3D G3DSA:3.40.640.10 89 348 1.2E-117 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_24395 96fc065cde48475df88d007d57d0d4cc 459 PIRSF PIRSF000521 151 452 6.3E-19 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DA442_24395 96fc065cde48475df88d007d57d0d4cc 459 PIRSF PIRSF000521 6 156 2.3E-5 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DA442_24395 96fc065cde48475df88d007d57d0d4cc 459 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 265 302 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DA442_04805 84db6800118b3f1188e01ec53ac1d371 90 Gene3D G3DSA:4.10.520.10 1 90 2.3E-36 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DA442_04805 84db6800118b3f1188e01ec53ac1d371 90 SMART SM00411 1 90 4.1E-44 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DA442_04805 84db6800118b3f1188e01ec53ac1d371 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 4.9E-34 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DA442_04805 84db6800118b3f1188e01ec53ac1d371 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 DA442_04805 84db6800118b3f1188e01ec53ac1d371 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 6.3E-21 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DA442_04805 84db6800118b3f1188e01ec53ac1d371 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 6.3E-21 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DA442_04805 84db6800118b3f1188e01ec53ac1d371 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 6.3E-21 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DA442_04805 84db6800118b3f1188e01ec53ac1d371 90 SUPERFAMILY SSF47729 1 90 3.39E-32 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DA442_14710 43782bd6032a3d655bb2d5b124384afe 297 Gene3D G3DSA:1.10.10.10 1 91 6.9E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_14710 43782bd6032a3d655bb2d5b124384afe 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 6.2E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_14710 43782bd6032a3d655bb2d5b124384afe 297 SUPERFAMILY SSF53850 89 291 4.16E-25 T 14-10-2018 DA442_14710 43782bd6032a3d655bb2d5b124384afe 297 Pfam PF03466 LysR substrate binding domain 88 289 1.5E-18 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_14710 43782bd6032a3d655bb2d5b124384afe 297 SUPERFAMILY SSF46785 2 112 9.15E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_14710 43782bd6032a3d655bb2d5b124384afe 297 Gene3D G3DSA:3.40.190.290 92 289 1.0E-30 T 14-10-2018 DA442_10285 829beeaae41f34538bd0d2b6d4e11b07 119 PIRSF PIRSF034961 7 119 5.1E-27 T 14-10-2018 IPR014593 Uncharacterised conserved protein UCP034961, SH3-2 DA442_10285 829beeaae41f34538bd0d2b6d4e11b07 119 SUPERFAMILY SSF50044 7 66 5.3E-8 T 14-10-2018 IPR036028 SH3-like domain superfamily GO:0005515 DA442_10285 829beeaae41f34538bd0d2b6d4e11b07 119 Pfam PF07653 Variant SH3 domain 9 63 5.6E-6 T 14-10-2018 IPR001452 SH3 domain GO:0005515 DA442_10285 829beeaae41f34538bd0d2b6d4e11b07 119 SUPERFAMILY SSF50044 74 117 1.83E-5 T 14-10-2018 IPR036028 SH3-like domain superfamily GO:0005515 DA442_23615 a145d285bc2fb6875b46824ce489bf2e 742 Gene3D G3DSA:2.160.20.10 377 735 6.8E-67 T 14-10-2018 IPR012334 Pectin lyase fold DA442_23615 a145d285bc2fb6875b46824ce489bf2e 742 SUPERFAMILY SSF51126 380 705 9.77E-49 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor DA442_01120 faf01d9cdd6ef47a67ed46fcca18be9d 343 SUPERFAMILY SSF55347 129 293 2.62E-17 T 14-10-2018 DA442_01120 faf01d9cdd6ef47a67ed46fcca18be9d 343 SUPERFAMILY SSF51735 7 164 3.66E-25 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_01120 faf01d9cdd6ef47a67ed46fcca18be9d 343 Gene3D G3DSA:3.30.360.10 125 339 5.4E-23 T 14-10-2018 DA442_01120 faf01d9cdd6ef47a67ed46fcca18be9d 343 Gene3D G3DSA:3.40.50.720 4 119 8.8E-17 T 14-10-2018 DA442_01120 faf01d9cdd6ef47a67ed46fcca18be9d 343 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 8 118 2.0E-11 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DA442_06705 36d3c3e6291444bfae82363534e40629 204 SUPERFAMILY SSF53254 1 189 3.64E-38 T 14-10-2018 IPR029033 Histidine phosphatase superfamily DA442_06705 36d3c3e6291444bfae82363534e40629 204 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 186 3.9E-40 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DA442_06705 36d3c3e6291444bfae82363534e40629 204 SMART SM00855 5 154 4.3E-10 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DA442_06705 36d3c3e6291444bfae82363534e40629 204 TIGRFAM TIGR03162 ribazole_cobC: alpha-ribazole phosphatase 6 182 1.5E-54 T 14-10-2018 IPR017578 Alpha-ribazole phosphatase, CobC GO:0009236|GO:0043755 KEGG: 00860+3.1.3.73|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 DA442_06705 36d3c3e6291444bfae82363534e40629 204 PIRSF PIRSF000709 2 180 8.3E-4 T 14-10-2018 DA442_06705 36d3c3e6291444bfae82363534e40629 204 Gene3D G3DSA:3.40.50.1240 1 204 1.9E-63 T 14-10-2018 IPR029033 Histidine phosphatase superfamily DA442_12445 9b99d02f9a20b9badc0e11f6b6e705df 580 PRINTS PR01009 Flagellar M-ring protein signature 181 195 2.1E-22 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DA442_12445 9b99d02f9a20b9badc0e11f6b6e705df 580 PRINTS PR01009 Flagellar M-ring protein signature 224 242 2.1E-22 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DA442_12445 9b99d02f9a20b9badc0e11f6b6e705df 580 PRINTS PR01009 Flagellar M-ring protein signature 149 167 2.1E-22 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DA442_12445 9b99d02f9a20b9badc0e11f6b6e705df 580 PRINTS PR01009 Flagellar M-ring protein signature 374 398 2.1E-22 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DA442_12445 9b99d02f9a20b9badc0e11f6b6e705df 580 PRINTS PR01009 Flagellar M-ring protein signature 294 312 2.1E-22 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DA442_12445 9b99d02f9a20b9badc0e11f6b6e705df 580 PIRSF PIRSF004862 27 580 1.4E-162 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DA442_12445 9b99d02f9a20b9badc0e11f6b6e705df 580 Pfam PF01514 Secretory protein of YscJ/FliF family 62 248 3.2E-54 T 14-10-2018 IPR006182 Secretory protein YscJ/FliF DA442_12445 9b99d02f9a20b9badc0e11f6b6e705df 580 Gene3D G3DSA:3.30.300.30 151 246 1.3E-10 T 14-10-2018 DA442_12445 9b99d02f9a20b9badc0e11f6b6e705df 580 Pfam PF08345 Flagellar M-ring protein C-terminal 281 451 2.1E-38 T 14-10-2018 IPR013556 Flagellar M-ring C-terminal DA442_12445 9b99d02f9a20b9badc0e11f6b6e705df 580 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 53 579 2.5E-72 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DA442_10430 dfca4fbe3ac64cfaa96c76e420336c8c 135 SUPERFAMILY SSF82784 1 130 3.14E-31 T 14-10-2018 IPR036102 OsmC/Ohr superfamily DA442_10430 dfca4fbe3ac64cfaa96c76e420336c8c 135 Pfam PF02566 OsmC-like protein 30 126 1.5E-14 T 14-10-2018 IPR003718 OsmC/Ohr family DA442_10430 dfca4fbe3ac64cfaa96c76e420336c8c 135 Gene3D G3DSA:3.30.300.20 1 132 3.2E-26 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta DA442_09195 fc40ce05fa43c37791dcd8a0c54df5d9 295 SUPERFAMILY SSF103481 194 271 3.27E-6 T 14-10-2018 DA442_09195 fc40ce05fa43c37791dcd8a0c54df5d9 295 Pfam PF00892 EamA-like transporter family 140 275 1.4E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DA442_09195 fc40ce05fa43c37791dcd8a0c54df5d9 295 Pfam PF00892 EamA-like transporter family 3 126 6.5E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DA442_09195 fc40ce05fa43c37791dcd8a0c54df5d9 295 SUPERFAMILY SSF103481 41 123 3.14E-7 T 14-10-2018 DA442_13035 46fc197a1c5d089976a718b678d5e190 199 Gene3D G3DSA:3.40.50.880 1 193 2.1E-49 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DA442_13035 46fc197a1c5d089976a718b678d5e190 199 SUPERFAMILY SSF52317 3 190 7.04E-45 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DA442_13035 46fc197a1c5d089976a718b678d5e190 199 Pfam PF01965 DJ-1/PfpI family 3 169 6.2E-41 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 DA442_13035 46fc197a1c5d089976a718b678d5e190 199 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 4 182 2.0E-63 T 14-10-2018 IPR006287 Protein/nucleic acid deglycase DJ-1 Reactome: R-HSA-3899300 DA442_20600 4d375b223cd56e08f4110477f1bfb361 200 Gene3D G3DSA:3.40.50.150 2 200 6.2E-40 T 14-10-2018 DA442_20600 4d375b223cd56e08f4110477f1bfb361 200 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 10 196 2.4E-29 T 14-10-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 DA442_20600 4d375b223cd56e08f4110477f1bfb361 200 SUPERFAMILY SSF53335 9 199 1.79E-42 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_08760 db09f27d862c0948754c8e1f30ba3d7e 351 SUPERFAMILY SSF160544 238 345 4.45E-33 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal DA442_08760 db09f27d862c0948754c8e1f30ba3d7e 351 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 6 28 2.0E-44 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DA442_08760 db09f27d862c0948754c8e1f30ba3d7e 351 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 202 220 2.0E-44 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DA442_08760 db09f27d862c0948754c8e1f30ba3d7e 351 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 222 239 2.0E-44 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DA442_08760 db09f27d862c0948754c8e1f30ba3d7e 351 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 266 281 2.0E-44 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DA442_08760 db09f27d862c0948754c8e1f30ba3d7e 351 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 296 317 2.0E-44 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DA442_08760 db09f27d862c0948754c8e1f30ba3d7e 351 Gene3D G3DSA:3.40.1690.10 211 350 3.3E-55 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal DA442_08760 db09f27d862c0948754c8e1f30ba3d7e 351 Pfam PF01312 FlhB HrpN YscU SpaS Family 3 340 1.8E-114 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DA442_08760 db09f27d862c0948754c8e1f30ba3d7e 351 TIGRFAM TIGR01404 FlhB_rel_III: type III secretion protein, YscU/HrpY family 3 343 3.6E-135 T 14-10-2018 IPR006307 Type III exporter system, secretion apparatus protein BsaZ GO:0009306|GO:0016021 DA442_04755 ff3b8200d6c032962c5483aa20db062a 332 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 33 276 5.6E-80 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 DA442_04755 ff3b8200d6c032962c5483aa20db062a 332 PIRSF PIRSF006470 1 332 6.6E-124 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 DA442_04755 ff3b8200d6c032962c5483aa20db062a 332 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 317 1.6E-104 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 DA442_04755 ff3b8200d6c032962c5483aa20db062a 332 Gene3D G3DSA:3.40.190.170 27 328 2.5E-90 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily DA442_05095 800718be08ab21ef0fbc3afcbef98c59 182 Pfam PF13302 Acetyltransferase (GNAT) domain 11 153 1.0E-22 T 14-10-2018 IPR000182 GNAT domain DA442_05095 800718be08ab21ef0fbc3afcbef98c59 182 Gene3D G3DSA:3.40.630.30 1 178 2.6E-47 T 14-10-2018 DA442_05095 800718be08ab21ef0fbc3afcbef98c59 182 SUPERFAMILY SSF55729 3 177 1.62E-45 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_05290 fe8880e798c77e50f5ab447b09336d5e 79 SMART SM00357 10 74 7.8E-25 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 DA442_05290 fe8880e798c77e50f5ab447b09336d5e 79 SUPERFAMILY SSF50249 6 74 2.06E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_05290 fe8880e798c77e50f5ab447b09336d5e 79 Gene3D G3DSA:2.40.50.140 8 72 1.2E-25 T 14-10-2018 DA442_05290 fe8880e798c77e50f5ab447b09336d5e 79 PRINTS PR00050 Cold shock protein signature 32 41 9.6E-15 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DA442_05290 fe8880e798c77e50f5ab447b09336d5e 79 PRINTS PR00050 Cold shock protein signature 11 26 9.6E-15 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DA442_05290 fe8880e798c77e50f5ab447b09336d5e 79 PRINTS PR00050 Cold shock protein signature 47 65 9.6E-15 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DA442_05290 fe8880e798c77e50f5ab447b09336d5e 79 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 8 75 3.9E-41 T 14-10-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355 DA442_05290 fe8880e798c77e50f5ab447b09336d5e 79 ProSitePatterns PS00352 'Cold-shock' domain signature. 22 41 - T 14-10-2018 IPR019844 Cold-shock conserved site DA442_05290 fe8880e798c77e50f5ab447b09336d5e 79 PIRSF PIRSF002599 5 79 3.2E-23 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 DA442_05290 fe8880e798c77e50f5ab447b09336d5e 79 Pfam PF00313 'Cold-shock' DNA-binding domain 10 73 3.7E-28 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DA442_22380 c4d958c8020896714adbeb0a11dc9a80 877 Gene3D G3DSA:2.60.40.1190 666 871 4.5E-16 T 14-10-2018 DA442_22380 c4d958c8020896714adbeb0a11dc9a80 877 SMART SM00642 44 459 2.2E-69 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DA442_22380 c4d958c8020896714adbeb0a11dc9a80 877 SUPERFAMILY SSF51445 32 465 4.3E-83 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DA442_22380 c4d958c8020896714adbeb0a11dc9a80 877 Pfam PF09985 C-terminal binding-module, SLH-like, of glucodextranase 682 863 2.8E-16 T 14-10-2018 IPR019248 Glucodextranase-like, C-terminal DA442_22380 c4d958c8020896714adbeb0a11dc9a80 877 Pfam PF00128 Alpha amylase, catalytic domain 76 424 2.0E-61 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DA442_22380 c4d958c8020896714adbeb0a11dc9a80 877 Gene3D G3DSA:2.60.40.1180 463 556 5.4E-8 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta DA442_22380 c4d958c8020896714adbeb0a11dc9a80 877 SUPERFAMILY SSF49344 679 861 2.71E-20 T 14-10-2018 DA442_22380 c4d958c8020896714adbeb0a11dc9a80 877 SUPERFAMILY SSF51011 480 556 9.45E-8 T 14-10-2018 DA442_22380 c4d958c8020896714adbeb0a11dc9a80 877 Gene3D G3DSA:3.20.20.80 28 461 1.2E-105 T 14-10-2018 DA442_01080 e417757e58a671c338b2a092eb9a64c0 238 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 2 234 43.572 T 14-10-2018 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676 DA442_01080 e417757e58a671c338b2a092eb9a64c0 238 SUPERFAMILY SSF56112 45 197 9.44E-19 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily DA442_01080 e417757e58a671c338b2a092eb9a64c0 238 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 30 230 8.8E-67 T 14-10-2018 DA442_01080 e417757e58a671c338b2a092eb9a64c0 238 Gene3D G3DSA:1.10.510.10 144 232 9.3E-15 T 14-10-2018 DA442_25905 cd842c1a836fda9646659ade598132b6 157 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 66 154 1.9E-27 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DA442_25905 cd842c1a836fda9646659ade598132b6 157 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 24 59 7.4E-11 T 14-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 DA442_25905 cd842c1a836fda9646659ade598132b6 157 SUPERFAMILY SSF54534 19 156 2.95E-52 T 14-10-2018 DA442_25905 cd842c1a836fda9646659ade598132b6 157 Gene3D G3DSA:3.10.50.40 21 157 3.0E-53 T 14-10-2018 DA442_14485 bb6a90c009c5f6ae351f3bc642bc32eb 93 Pfam PF04977 Septum formation initiator 11 89 1.0E-29 T 14-10-2018 IPR007060 Septum formation initiator FtsL/DivIC DA442_14485 bb6a90c009c5f6ae351f3bc642bc32eb 93 Gene3D G3DSA:1.20.5.400 22 63 6.5E-13 T 14-10-2018 DA442_14485 bb6a90c009c5f6ae351f3bc642bc32eb 93 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 37.013 T 14-10-2018 IPR023081 Cell division protein FtsB DA442_20730 e72f8666b460f53c7a0594bc25071aa8 703 SUPERFAMILY SSF101898 43 227 1.86E-11 T 14-10-2018 DA442_20730 e72f8666b460f53c7a0594bc25071aa8 703 TIGRFAM TIGR04456 LruC_dom: LruC domain 442 692 1.4E-83 T 14-10-2018 IPR031025 LruC domain DA442_20730 e72f8666b460f53c7a0594bc25071aa8 703 Pfam PF16130 Domain of unknown function (DUF4842) 476 692 8.9E-60 T 14-10-2018 IPR032295 Domain of unknown function DUF4842 DA442_20730 e72f8666b460f53c7a0594bc25071aa8 703 Gene3D G3DSA:2.120.10.30 83 257 8.0E-6 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like DA442_04325 0d0a231d86c87079665a3bbd69fdb2f9 462 Gene3D G3DSA:1.20.1250.20 225 455 3.3E-61 T 14-10-2018 DA442_04325 0d0a231d86c87079665a3bbd69fdb2f9 462 Gene3D G3DSA:1.20.1250.20 1 224 1.0E-73 T 14-10-2018 DA442_04325 0d0a231d86c87079665a3bbd69fdb2f9 462 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 228 440 1.1E-46 T 14-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 DA442_04325 0d0a231d86c87079665a3bbd69fdb2f9 462 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 6 215 1.2E-59 T 14-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 DA442_04325 0d0a231d86c87079665a3bbd69fdb2f9 462 SUPERFAMILY SSF103473 7 435 9.02E-43 T 14-10-2018 IPR036259 MFS transporter superfamily DA442_04325 0d0a231d86c87079665a3bbd69fdb2f9 462 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 153 165 - T 14-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 DA442_04325 0d0a231d86c87079665a3bbd69fdb2f9 462 Pfam PF00854 POT family 229 405 4.8E-31 T 14-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 DA442_04325 0d0a231d86c87079665a3bbd69fdb2f9 462 Pfam PF00854 POT family 85 197 4.7E-29 T 14-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 DA442_18925 1a824613338400ab96fa4ad60f5cdd27 191 Pfam PF13505 Outer membrane protein beta-barrel domain 5 191 4.3E-24 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel DA442_18925 1a824613338400ab96fa4ad60f5cdd27 191 Gene3D G3DSA:2.40.160.20 25 191 2.8E-25 T 14-10-2018 DA442_18925 1a824613338400ab96fa4ad60f5cdd27 191 SUPERFAMILY SSF56925 26 191 5.76E-28 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DA442_12885 b8e084133566f96a096f03bb6059df30 68 Pfam PF06786 Uncharacterised protein family (UPF0253) 1 67 1.6E-36 T 14-10-2018 IPR009624 Uncharacterised protein family UPF0253 DA442_12885 b8e084133566f96a096f03bb6059df30 68 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 68 29.93 T 14-10-2018 IPR009624 Uncharacterised protein family UPF0253 DA442_12885 b8e084133566f96a096f03bb6059df30 68 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 7 65 6.0E-27 T 14-10-2018 IPR009624 Uncharacterised protein family UPF0253 DA442_07830 4c95cd4cb595663973a03d5f4b8918f2 1335 SMART SM00382 130 421 3.6E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_07830 4c95cd4cb595663973a03d5f4b8918f2 1335 Gene3D G3DSA:1.20.120.1080 485 586 5.0E-18 T 14-10-2018 DA442_07830 4c95cd4cb595663973a03d5f4b8918f2 1335 Gene3D G3DSA:3.40.50.300 65 290 8.5E-79 T 14-10-2018 DA442_07830 4c95cd4cb595663973a03d5f4b8918f2 1335 Gene3D G3DSA:3.40.50.300 291 458 9.1E-56 T 14-10-2018 DA442_07830 4c95cd4cb595663973a03d5f4b8918f2 1335 Pfam PF00271 Helicase conserved C-terminal domain 326 440 1.9E-11 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_07830 4c95cd4cb595663973a03d5f4b8918f2 1335 SMART SM00847 501 596 2.5E-36 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 DA442_07830 4c95cd4cb595663973a03d5f4b8918f2 1335 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 659 735 6.6E-23 T 14-10-2018 IPR011709 Domain of unknown function DUF1605 DA442_07830 4c95cd4cb595663973a03d5f4b8918f2 1335 SMART SM00490 341 441 3.1E-15 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_07830 4c95cd4cb595663973a03d5f4b8918f2 1335 Pfam PF11898 Domain of unknown function (DUF3418) 749 1333 1.9E-232 T 14-10-2018 IPR024590 RNA helicase HrpA, C-terminal DA442_07830 4c95cd4cb595663973a03d5f4b8918f2 1335 Pfam PF00270 DEAD/DEAH box helicase 125 271 4.1E-8 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DA442_07830 4c95cd4cb595663973a03d5f4b8918f2 1335 SMART SM00487 113 297 2.3E-31 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DA442_07830 4c95cd4cb595663973a03d5f4b8918f2 1335 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 52 1333 0.0 T 14-10-2018 IPR010222 RNA helicase HrpA GO:0004004 DA442_07830 4c95cd4cb595663973a03d5f4b8918f2 1335 Pfam PF04408 Helicase associated domain (HA2) 503 594 6.6E-18 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 DA442_07830 4c95cd4cb595663973a03d5f4b8918f2 1335 SUPERFAMILY SSF52540 112 604 7.16E-116 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_01195 97d6f8fa22cd38d00746f5f41bed19b0 171 Pfam PF13505 Outer membrane protein beta-barrel domain 10 171 2.4E-15 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel DA442_01195 97d6f8fa22cd38d00746f5f41bed19b0 171 SUPERFAMILY SSF56925 25 171 1.46E-18 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DA442_01195 97d6f8fa22cd38d00746f5f41bed19b0 171 Gene3D G3DSA:2.40.160.20 22 171 8.4E-16 T 14-10-2018 DA442_08720 33cf1fd1630df8ad3c9e9deac074b969 297 SUPERFAMILY SSF140591 75 272 7.06E-51 T 14-10-2018 DA442_08720 33cf1fd1630df8ad3c9e9deac074b969 297 TIGRFAM TIGR02568 LcrE: type III secretion regulator YopN/LcrE/InvE/MxiC 37 285 3.5E-84 T 14-10-2018 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC GO:0009986|GO:0030254|GO:0050709 DA442_08720 33cf1fd1630df8ad3c9e9deac074b969 297 Pfam PF07201 HrpJ-like domain 60 226 2.1E-36 T 14-10-2018 IPR010812 Hypersensitivity response secretion-like, HrpJ GO:0009405|GO:0019867|GO:0046903 DA442_08720 33cf1fd1630df8ad3c9e9deac074b969 297 Gene3D G3DSA:1.10.150.630 174 261 2.0E-5 T 14-10-2018 DA442_23885 b6d535715426a217f9fe0d9adc7e3f76 174 Pfam PF11286 Protein of unknown function (DUF3087) 1 171 2.4E-63 T 14-10-2018 IPR021438 Protein of unknown function DUF3087 DA442_24830 69e812f2767a405fa4859902189101ff 174 Pfam PF04170 NlpE N-terminal domain 79 163 1.5E-32 T 14-10-2018 IPR007298 Copper resistance lipoprotein NlpE DA442_24830 69e812f2767a405fa4859902189101ff 174 Gene3D G3DSA:2.40.128.640 66 174 4.5E-42 T 14-10-2018 DA442_21995 e0a5395a0e362a202d44b4d373f34c86 774 Pfam PF00990 Diguanylate cyclase, GGDEF domain 347 503 5.8E-48 T 14-10-2018 IPR000160 GGDEF domain DA442_21995 e0a5395a0e362a202d44b4d373f34c86 774 SUPERFAMILY SSF55073 352 510 1.33E-50 T 14-10-2018 IPR029787 Nucleotide cyclase DA442_21995 e0a5395a0e362a202d44b4d373f34c86 774 Gene3D G3DSA:3.30.70.270 341 520 4.0E-57 T 14-10-2018 DA442_21995 e0a5395a0e362a202d44b4d373f34c86 774 SMART SM00052 518 763 4.0E-104 T 14-10-2018 IPR001633 EAL domain DA442_21995 e0a5395a0e362a202d44b4d373f34c86 774 SUPERFAMILY SSF141868 523 771 2.62E-83 T 14-10-2018 IPR035919 EAL domain superfamily DA442_21995 e0a5395a0e362a202d44b4d373f34c86 774 Pfam PF00563 EAL domain 524 758 3.7E-68 T 14-10-2018 IPR001633 EAL domain DA442_21995 e0a5395a0e362a202d44b4d373f34c86 774 Gene3D G3DSA:3.20.20.450 521 772 8.1E-93 T 14-10-2018 IPR035919 EAL domain superfamily DA442_21995 e0a5395a0e362a202d44b4d373f34c86 774 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 343 505 2.1E-41 T 14-10-2018 IPR000160 GGDEF domain DA442_21995 e0a5395a0e362a202d44b4d373f34c86 774 SMART SM00267 336 508 3.9E-58 T 14-10-2018 IPR000160 GGDEF domain DA442_08575 4598bbc77855f965108d0845a98602ef 232 Gene3D G3DSA:3.40.50.620 1 230 6.2E-81 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DA442_08575 4598bbc77855f965108d0845a98602ef 232 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 205 4.7E-84 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 DA442_08575 4598bbc77855f965108d0845a98602ef 232 Pfam PF06508 Queuosine biosynthesis protein QueC 3 212 1.8E-85 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 DA442_08575 4598bbc77855f965108d0845a98602ef 232 PIRSF PIRSF006293 1 225 5.9E-84 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 DA442_08575 4598bbc77855f965108d0845a98602ef 232 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 218 51.372 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 DA442_08575 4598bbc77855f965108d0845a98602ef 232 SUPERFAMILY SSF52402 1 211 2.87E-67 T 14-10-2018 DA442_13025 6aec9efc41466a121446c4a767c1c89b 272 SUPERFAMILY SSF111364 30 272 4.05E-82 T 14-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 DA442_13025 6aec9efc41466a121446c4a767c1c89b 272 Gene3D G3DSA:2.40.230.20 23 272 2.5E-80 T 14-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 DA442_13025 6aec9efc41466a121446c4a767c1c89b 272 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 30 272 3.0E-98 T 14-10-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 DA442_03310 8a22ca959255df171507f7b351d580a9 161 Hamap MF_00023 SsrA-binding protein [smpB]. 1 161 69.072 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 DA442_03310 8a22ca959255df171507f7b351d580a9 161 SUPERFAMILY SSF74982 8 139 4.97E-48 T 14-10-2018 IPR023620 Small protein B DA442_03310 8a22ca959255df171507f7b351d580a9 161 Pfam PF01668 SmpB protein 15 157 2.1E-55 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 DA442_03310 8a22ca959255df171507f7b351d580a9 161 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 15 139 4.0E-61 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 DA442_03310 8a22ca959255df171507f7b351d580a9 161 ProSitePatterns PS01317 SsrA-binding protein. 33 45 - T 14-10-2018 IPR020081 SsrA-binding protein, conserved site DA442_03310 8a22ca959255df171507f7b351d580a9 161 TIGRFAM TIGR00086 smpB: SsrA-binding protein 15 157 2.3E-52 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 DA442_03310 8a22ca959255df171507f7b351d580a9 161 Gene3D G3DSA:2.40.280.10 7 136 6.1E-44 T 14-10-2018 IPR023620 Small protein B DA442_25365 7ced443f56fd377aa25be7b62de382f4 456 TIGRFAM TIGR04107 rSAM_HutW: putative heme utilization radical SAM enzyme HutW 23 442 9.0E-180 T 14-10-2018 IPR026332 Putative heme utilization radical SAM enzyme HutW DA442_25365 7ced443f56fd377aa25be7b62de382f4 456 Gene3D G3DSA:3.80.30.20 39 364 3.4E-72 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe DA442_25365 7ced443f56fd377aa25be7b62de382f4 456 Pfam PF04055 Radical SAM superfamily 67 237 3.5E-14 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DA442_25365 7ced443f56fd377aa25be7b62de382f4 456 SMART SM00729 62 285 1.1E-41 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DA442_25365 7ced443f56fd377aa25be7b62de382f4 456 SUPERFAMILY SSF102114 55 439 1.44E-82 T 14-10-2018 DA442_19645 b4f4b4cfee5104c9ead94686027c1f8c 405 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 135 143 - T 14-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DA442_19645 b4f4b4cfee5104c9ead94686027c1f8c 405 PIRSF PIRSF001480 8 405 2.2E-99 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DA442_19645 b4f4b4cfee5104c9ead94686027c1f8c 405 Gene3D G3DSA:2.60.120.10 317 397 1.2E-128 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DA442_19645 b4f4b4cfee5104c9ead94686027c1f8c 405 SUPERFAMILY SSF51182 9 394 2.45E-103 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DA442_19645 b4f4b4cfee5104c9ead94686027c1f8c 405 PRINTS PR00714 Phosphomannose isomerase type I signature 236 251 3.6E-68 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DA442_19645 b4f4b4cfee5104c9ead94686027c1f8c 405 PRINTS PR00714 Phosphomannose isomerase type I signature 252 271 3.6E-68 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DA442_19645 b4f4b4cfee5104c9ead94686027c1f8c 405 PRINTS PR00714 Phosphomannose isomerase type I signature 42 57 3.6E-68 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DA442_19645 b4f4b4cfee5104c9ead94686027c1f8c 405 PRINTS PR00714 Phosphomannose isomerase type I signature 14 32 3.6E-68 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DA442_19645 b4f4b4cfee5104c9ead94686027c1f8c 405 PRINTS PR00714 Phosphomannose isomerase type I signature 290 309 3.6E-68 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DA442_19645 b4f4b4cfee5104c9ead94686027c1f8c 405 PRINTS PR00714 Phosphomannose isomerase type I signature 90 111 3.6E-68 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DA442_19645 b4f4b4cfee5104c9ead94686027c1f8c 405 PRINTS PR00714 Phosphomannose isomerase type I signature 271 290 3.6E-68 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DA442_19645 b4f4b4cfee5104c9ead94686027c1f8c 405 PRINTS PR00714 Phosphomannose isomerase type I signature 135 158 3.6E-68 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DA442_19645 b4f4b4cfee5104c9ead94686027c1f8c 405 Gene3D G3DSA:1.10.441.10 159 316 1.2E-128 T 14-10-2018 DA442_19645 b4f4b4cfee5104c9ead94686027c1f8c 405 Gene3D G3DSA:2.60.120.10 16 291 1.2E-128 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DA442_19645 b4f4b4cfee5104c9ead94686027c1f8c 405 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 10 397 1.5E-90 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DA442_19645 b4f4b4cfee5104c9ead94686027c1f8c 405 Pfam PF01238 Phosphomannose isomerase type I 12 369 3.7E-85 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DA442_24685 03d82de2d0ac30affdc03335a053f50d 484 Gene3D G3DSA:3.90.780.10 337 484 2.1E-46 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_24685 03d82de2d0ac30affdc03335a053f50d 484 Pfam PF02872 5'-nucleotidase, C-terminal domain 341 481 4.4E-43 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_24685 03d82de2d0ac30affdc03335a053f50d 484 SUPERFAMILY SSF56300 26 334 5.14E-68 T 14-10-2018 DA442_24685 03d82de2d0ac30affdc03335a053f50d 484 Gene3D G3DSA:3.60.21.10 26 336 4.0E-81 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like DA442_24685 03d82de2d0ac30affdc03335a053f50d 484 SUPERFAMILY SSF55816 333 483 3.79E-46 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_24685 03d82de2d0ac30affdc03335a053f50d 484 Pfam PF00149 Calcineurin-like phosphoesterase 32 257 1.2E-11 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DA442_24685 03d82de2d0ac30affdc03335a053f50d 484 PRINTS PR01607 Apyrase family signature 386 409 4.3E-20 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_24685 03d82de2d0ac30affdc03335a053f50d 484 PRINTS PR01607 Apyrase family signature 29 47 4.3E-20 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_24685 03d82de2d0ac30affdc03335a053f50d 484 PRINTS PR01607 Apyrase family signature 455 474 4.3E-20 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_24685 03d82de2d0ac30affdc03335a053f50d 484 PRINTS PR01607 Apyrase family signature 272 292 4.3E-20 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_24685 03d82de2d0ac30affdc03335a053f50d 484 PRINTS PR01607 Apyrase family signature 242 265 4.3E-20 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DA442_03345 752fbaa2c8f6bdab074ea40e3f31c1dc 198 PRINTS PR00773 GrpE protein signature 177 196 3.4E-29 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DA442_03345 752fbaa2c8f6bdab074ea40e3f31c1dc 198 PRINTS PR00773 GrpE protein signature 150 165 3.4E-29 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DA442_03345 752fbaa2c8f6bdab074ea40e3f31c1dc 198 PRINTS PR00773 GrpE protein signature 95 110 3.4E-29 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DA442_03345 752fbaa2c8f6bdab074ea40e3f31c1dc 198 PRINTS PR00773 GrpE protein signature 67 83 3.4E-29 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DA442_03345 752fbaa2c8f6bdab074ea40e3f31c1dc 198 ProSitePatterns PS01071 grpE protein signature. 153 196 - T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DA442_03345 752fbaa2c8f6bdab074ea40e3f31c1dc 198 SUPERFAMILY SSF51064 143 198 4.84E-20 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 DA442_03345 752fbaa2c8f6bdab074ea40e3f31c1dc 198 Gene3D G3DSA:3.90.20.20 35 141 4.7E-33 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 DA442_03345 752fbaa2c8f6bdab074ea40e3f31c1dc 198 Gene3D G3DSA:2.30.22.10 142 198 3.0E-26 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 DA442_03345 752fbaa2c8f6bdab074ea40e3f31c1dc 198 Hamap MF_01151 Protein GrpE [grpE]. 2 198 22.876 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DA442_03345 752fbaa2c8f6bdab074ea40e3f31c1dc 198 SUPERFAMILY SSF58014 44 142 9.15E-30 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 DA442_03345 752fbaa2c8f6bdab074ea40e3f31c1dc 198 Pfam PF01025 GrpE 40 198 3.3E-56 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DA442_20975 1343bc968a281e908679d7a1f5912d04 220 Pfam PF12945 Flagellar protein YcgR 15 105 7.1E-13 T 14-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal DA442_20975 1343bc968a281e908679d7a1f5912d04 220 SUPERFAMILY SSF141371 3 115 6.28E-30 T 14-10-2018 DA442_20975 1343bc968a281e908679d7a1f5912d04 220 Gene3D G3DSA:2.30.110.10 3 112 6.5E-11 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 DA442_20975 1343bc968a281e908679d7a1f5912d04 220 SUPERFAMILY SSF141371 116 217 2.55E-17 T 14-10-2018 DA442_20975 1343bc968a281e908679d7a1f5912d04 220 Pfam PF07238 PilZ domain 113 204 9.0E-12 T 14-10-2018 IPR009875 PilZ domain GO:0035438 DA442_20975 1343bc968a281e908679d7a1f5912d04 220 Gene3D G3DSA:2.40.10.220 113 212 8.7E-6 T 14-10-2018 DA442_04265 4ab690b43a97d511e5cb63f08730bd78 263 Pfam PF07556 Protein of unknown function (DUF1538) 21 246 1.6E-70 T 14-10-2018 IPR011435 Protein of unknown function DUF1538 DA442_04820 5c1327fb47dfece2cdafc4f108de4751 202 SUPERFAMILY SSF144091 22 192 2.88E-28 T 14-10-2018 DA442_04820 5c1327fb47dfece2cdafc4f108de4751 202 Gene3D G3DSA:1.20.1540.10 13 200 5.2E-21 T 14-10-2018 IPR035952 Rhomboid-like superfamily DA442_04820 5c1327fb47dfece2cdafc4f108de4751 202 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 43 190 9.0E-49 T 14-10-2018 IPR023826 Rhomboid-like serine protease, proteobacteria DA442_04820 5c1327fb47dfece2cdafc4f108de4751 202 Pfam PF01694 Rhomboid family 53 192 2.4E-13 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 DA442_22270 acbc1a0b8c2380e7542a9da9c40cf29e 170 Pfam PF10973 Protein of unknown function (DUF2799) 29 110 1.4E-24 T 14-10-2018 IPR021242 Protein of unknown function DUF2799 DA442_08755 997043b5955f4719925c13598e103b9c 261 TIGRFAM TIGR01401 fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT 5 242 2.3E-78 T 14-10-2018 IPR006304 Type III secretion protein SpaR/YscT GO:0016021 DA442_08755 997043b5955f4719925c13598e103b9c 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 182 204 5.2E-30 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 DA442_08755 997043b5955f4719925c13598e103b9c 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 5.2E-30 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 DA442_08755 997043b5955f4719925c13598e103b9c 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 19 40 5.2E-30 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 DA442_08755 997043b5955f4719925c13598e103b9c 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 204 223 5.2E-30 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 DA442_08755 997043b5955f4719925c13598e103b9c 261 Pfam PF01311 Bacterial export proteins, family 1 12 246 1.9E-55 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 DA442_08365 d43f589b12340b82f3593bc4ec5edd73 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 1.1E-146 T 14-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 DA442_08365 d43f589b12340b82f3593bc4ec5edd73 336 SUPERFAMILY SSF51395 1 336 6.0E-109 T 14-10-2018 DA442_08365 d43f589b12340b82f3593bc4ec5edd73 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 DA442_08365 d43f589b12340b82f3593bc4ec5edd73 336 Gene3D G3DSA:3.20.20.70 2 336 4.4E-144 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_08365 d43f589b12340b82f3593bc4ec5edd73 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 DA442_08365 d43f589b12340b82f3593bc4ec5edd73 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 51.536 T 14-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 DA442_08365 d43f589b12340b82f3593bc4ec5edd73 336 PIRSF PIRSF000164 10 336 7.6E-106 T 14-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 DA442_08365 d43f589b12340b82f3593bc4ec5edd73 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 336 9.5E-92 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 DA442_20410 0884bc28d782e3666127e9be26be5e7a 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 267 6.7E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DA442_20410 0884bc28d782e3666127e9be26be5e7a 280 Gene3D G3DSA:1.10.3720.10 85 274 2.1E-34 T 14-10-2018 IPR035906 MetI-like superfamily DA442_20410 0884bc28d782e3666127e9be26be5e7a 280 TIGRFAM TIGR03416 ABC_choXWV_perm: choline ABC transporter, permease protein 6 272 5.2E-127 T 14-10-2018 IPR017784 ABC transporter, choline, permease protein DA442_20410 0884bc28d782e3666127e9be26be5e7a 280 SUPERFAMILY SSF161098 88 272 1.7E-39 T 14-10-2018 IPR035906 MetI-like superfamily DA442_18445 003fb93245db959bc7bfc33adbd8da4d 706 Pfam PF08453 Peptidase family M9 N-terminal 51 234 2.0E-47 T 14-10-2018 IPR013661 Peptidase M9, collagenase, N-terminal domain DA442_18445 003fb93245db959bc7bfc33adbd8da4d 706 Pfam PF01752 Collagenase 296 580 1.1E-108 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 DA442_18445 003fb93245db959bc7bfc33adbd8da4d 706 Gene3D G3DSA:1.10.390.20 470 597 1.8E-5 T 14-10-2018 DA442_18445 003fb93245db959bc7bfc33adbd8da4d 706 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 622 682 4.4E-6 T 14-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial DA442_18445 003fb93245db959bc7bfc33adbd8da4d 706 Gene3D G3DSA:2.60.120.380 606 704 7.1E-9 T 14-10-2018 DA442_18445 003fb93245db959bc7bfc33adbd8da4d 706 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 396 410 3.9E-21 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 DA442_18445 003fb93245db959bc7bfc33adbd8da4d 706 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 414 430 3.9E-21 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 DA442_18445 003fb93245db959bc7bfc33adbd8da4d 706 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 456 474 3.9E-21 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 DA442_18445 003fb93245db959bc7bfc33adbd8da4d 706 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 480 495 3.9E-21 T 14-10-2018 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004222|GO:0005576|GO:0006508|GO:0008270 DA442_18445 003fb93245db959bc7bfc33adbd8da4d 706 Gene3D G3DSA:1.10.1740.190 327 469 1.3E-29 T 14-10-2018 DA442_21895 42cad7880ca00a61e4fb4ac57a1ac876 247 Pfam PF12945 Flagellar protein YcgR 39 128 3.1E-14 T 14-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal DA442_21895 42cad7880ca00a61e4fb4ac57a1ac876 247 SUPERFAMILY SSF141371 26 138 5.89E-33 T 14-10-2018 DA442_21895 42cad7880ca00a61e4fb4ac57a1ac876 247 Gene3D G3DSA:2.30.110.10 24 137 6.4E-41 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 DA442_21895 42cad7880ca00a61e4fb4ac57a1ac876 247 Pfam PF07238 PilZ domain 135 236 3.7E-16 T 14-10-2018 IPR009875 PilZ domain GO:0035438 DA442_21895 42cad7880ca00a61e4fb4ac57a1ac876 247 Gene3D G3DSA:2.40.10.220 138 247 2.4E-37 T 14-10-2018 DA442_21895 42cad7880ca00a61e4fb4ac57a1ac876 247 SUPERFAMILY SSF141371 139 246 3.14E-31 T 14-10-2018 DA442_08600 bd0bb312a858d68dc99b1dacff530bff 160 Pfam PF00583 Acetyltransferase (GNAT) family 30 146 1.8E-16 T 14-10-2018 IPR000182 GNAT domain DA442_08600 bd0bb312a858d68dc99b1dacff530bff 160 SUPERFAMILY SSF55729 4 147 1.13E-26 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_08600 bd0bb312a858d68dc99b1dacff530bff 160 Gene3D G3DSA:3.40.630.30 3 137 2.4E-31 T 14-10-2018 DA442_04345 d35787e7b14bd4f46dd0418a543fe4fe 404 Gene3D G3DSA:1.10.10.10 3 79 3.9E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_04345 d35787e7b14bd4f46dd0418a543fe4fe 404 Pfam PF00480 ROK family 86 390 2.0E-76 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DA442_04345 d35787e7b14bd4f46dd0418a543fe4fe 404 Gene3D G3DSA:3.30.420.40 207 376 1.9E-94 T 14-10-2018 DA442_04345 d35787e7b14bd4f46dd0418a543fe4fe 404 SUPERFAMILY SSF53067 85 391 1.94E-56 T 14-10-2018 DA442_04345 d35787e7b14bd4f46dd0418a543fe4fe 404 ProSitePatterns PS01125 ROK family signature. 217 244 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DA442_04345 d35787e7b14bd4f46dd0418a543fe4fe 404 SUPERFAMILY SSF46785 11 75 6.18E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_04345 d35787e7b14bd4f46dd0418a543fe4fe 404 Gene3D G3DSA:3.30.420.40 90 384 1.9E-94 T 14-10-2018 DA442_04470 c7b7a6751ac30685b89747359ef4d61b 292 PRINTS PR00690 Adhesin family signature 179 200 4.6E-9 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DA442_04470 c7b7a6751ac30685b89747359ef4d61b 292 PRINTS PR00690 Adhesin family signature 232 250 4.6E-9 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DA442_04470 c7b7a6751ac30685b89747359ef4d61b 292 PRINTS PR00690 Adhesin family signature 50 63 4.6E-9 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DA442_04470 c7b7a6751ac30685b89747359ef4d61b 292 PRINTS PR00690 Adhesin family signature 63 80 4.6E-9 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DA442_04470 c7b7a6751ac30685b89747359ef4d61b 292 PRINTS PR00691 Adhesin B signature 123 142 5.9E-5 T 14-10-2018 IPR006129 Adhesin B GO:0007155 DA442_04470 c7b7a6751ac30685b89747359ef4d61b 292 PRINTS PR00691 Adhesin B signature 44 62 5.9E-5 T 14-10-2018 IPR006129 Adhesin B GO:0007155 DA442_04470 c7b7a6751ac30685b89747359ef4d61b 292 PRINTS PR00691 Adhesin B signature 63 82 5.9E-5 T 14-10-2018 IPR006129 Adhesin B GO:0007155 DA442_04470 c7b7a6751ac30685b89747359ef4d61b 292 Pfam PF01297 Zinc-uptake complex component A periplasmic 22 289 2.9E-60 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 DA442_04470 c7b7a6751ac30685b89747359ef4d61b 292 Gene3D G3DSA:3.40.50.1980 21 179 1.3E-48 T 14-10-2018 DA442_04470 c7b7a6751ac30685b89747359ef4d61b 292 SUPERFAMILY SSF53807 12 290 5.89E-77 T 14-10-2018 DA442_04470 c7b7a6751ac30685b89747359ef4d61b 292 Gene3D G3DSA:3.40.50.1980 180 292 1.9E-39 T 14-10-2018 DA442_24820 7791642c5bebf2c78962fbec8c9db461 258 Pfam PF06629 MltA-interacting protein MipA 44 258 4.3E-38 T 14-10-2018 IPR010583 MltA-interacting MipA DA442_22105 deb7ef8e3ac840280d0135ba91d56e7d 449 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 13 445 7.2E-164 T 14-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DA442_22105 deb7ef8e3ac840280d0135ba91d56e7d 449 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 356 365 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DA442_22105 deb7ef8e3ac840280d0135ba91d56e7d 449 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 31 443 1.8E-189 T 14-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DA442_22105 deb7ef8e3ac840280d0135ba91d56e7d 449 SMART SM00382 166 349 0.0011 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_22105 deb7ef8e3ac840280d0135ba91d56e7d 449 Gene3D G3DSA:3.40.50.12240 22 448 4.8E-150 T 14-10-2018 DA442_22105 deb7ef8e3ac840280d0135ba91d56e7d 449 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 154 365 3.7E-72 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DA442_22105 deb7ef8e3ac840280d0135ba91d56e7d 449 SUPERFAMILY SSF52540 102 370 2.56E-94 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_23950 f838d7a017b2a90d2721c2f39ac5afe4 236 SUPERFAMILY SSF51695 3 235 2.69E-64 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 DA442_23950 f838d7a017b2a90d2721c2f39ac5afe4 236 Gene3D G3DSA:3.20.20.190 1 236 2.8E-67 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 DA442_23950 f838d7a017b2a90d2721c2f39ac5afe4 236 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 8 232 2.2E-36 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 DA442_05920 8f9bf61efc59a3846dde8101986620bc 212 Pfam PF02698 DUF218 domain 33 145 6.2E-22 T 14-10-2018 IPR003848 Domain of unknown function DUF218 DA442_05920 8f9bf61efc59a3846dde8101986620bc 212 Gene3D G3DSA:3.40.50.620 15 152 5.2E-31 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DA442_02600 a0e7820cfdb449a4f54cd72616921554 437 Pfam PF05525 Branched-chain amino acid transport protein 8 426 1.4E-150 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 DA442_02600 a0e7820cfdb449a4f54cd72616921554 437 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 413 1.6E-133 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 DA442_04305 05c49b3ed3e4f34228e1b8d8a6b92016 292 Pfam PF00486 Transcriptional regulatory protein, C terminal 31 107 1.0E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DA442_04305 05c49b3ed3e4f34228e1b8d8a6b92016 292 SUPERFAMILY SSF46894 9 107 1.9E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DA442_04305 05c49b3ed3e4f34228e1b8d8a6b92016 292 Gene3D G3DSA:1.10.10.10 5 107 4.9E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_04305 05c49b3ed3e4f34228e1b8d8a6b92016 292 SMART SM00862 30 107 2.9E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DA442_16895 cb5353e69ac428cd10f0058d593a1267 111 SUPERFAMILY SSF46785 5 85 1.47E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_16895 cb5353e69ac428cd10f0058d593a1267 111 Gene3D G3DSA:1.10.10.10 3 89 6.8E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_16895 cb5353e69ac428cd10f0058d593a1267 111 SMART SM00418 5 83 6.5E-24 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DA442_16895 cb5353e69ac428cd10f0058d593a1267 111 Pfam PF01022 Bacterial regulatory protein, arsR family 12 57 7.6E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DA442_16895 cb5353e69ac428cd10f0058d593a1267 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 5.2E-20 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DA442_16895 cb5353e69ac428cd10f0058d593a1267 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 5.2E-20 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DA442_16895 cb5353e69ac428cd10f0058d593a1267 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 5.2E-20 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DA442_16895 cb5353e69ac428cd10f0058d593a1267 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 5.2E-20 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DA442_16895 cb5353e69ac428cd10f0058d593a1267 111 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 29 47 - T 14-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 DA442_12325 dff045c1cb20c6f035a88be390ce1c3a 164 SMART SM00260 16 153 2.5E-50 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DA442_12325 dff045c1cb20c6f035a88be390ce1c3a 164 SUPERFAMILY SSF50341 15 158 9.29E-42 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 DA442_12325 dff045c1cb20c6f035a88be390ce1c3a 164 Gene3D G3DSA:2.30.30.40 22 147 7.0E-43 T 14-10-2018 DA442_12325 dff045c1cb20c6f035a88be390ce1c3a 164 Gene3D G3DSA:2.40.50.180 39 148 7.0E-43 T 14-10-2018 DA442_12325 dff045c1cb20c6f035a88be390ce1c3a 164 Pfam PF01584 CheW-like domain 20 155 4.7E-40 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DA442_10910 87112fcc5241bb583a45b0bac0957cda 170 Pfam PF13740 ACT domain 5 67 1.6E-10 T 14-10-2018 DA442_10910 87112fcc5241bb583a45b0bac0957cda 170 SUPERFAMILY SSF55021 90 167 1.25E-9 T 14-10-2018 DA442_10910 87112fcc5241bb583a45b0bac0957cda 170 Gene3D G3DSA:3.30.70.260 86 170 4.0E-13 T 14-10-2018 DA442_10910 87112fcc5241bb583a45b0bac0957cda 170 PIRSF PIRSF028103 1 169 1.1E-43 T 14-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 DA442_10910 87112fcc5241bb583a45b0bac0957cda 170 Gene3D G3DSA:3.30.70.260 3 76 2.4E-5 T 14-10-2018 DA442_20045 dd765ee6481f7f84f7e1c349c144f5c0 433 Gene3D G3DSA:3.30.1330.60 281 431 2.3E-39 T 14-10-2018 IPR036737 OmpA-like domain superfamily DA442_20045 dd765ee6481f7f84f7e1c349c144f5c0 433 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 52 261 4.1E-67 T 14-10-2018 IPR017732 Type IV / VI secretion system, DotU DA442_20045 dd765ee6481f7f84f7e1c349c144f5c0 433 SUPERFAMILY SSF103088 314 429 8.76E-26 T 14-10-2018 IPR036737 OmpA-like domain superfamily DA442_20045 dd765ee6481f7f84f7e1c349c144f5c0 433 TIGRFAM TIGR03350 type_VI_ompA: type VI secretion system peptidoglycan-associated domain 293 429 3.4E-45 T 14-10-2018 IPR017733 Type VI secretion system peptidoglycan-associated domain DA442_20045 dd765ee6481f7f84f7e1c349c144f5c0 433 Gene3D G3DSA:1.25.40.590 50 207 2.0E-48 T 14-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily DA442_20045 dd765ee6481f7f84f7e1c349c144f5c0 433 Pfam PF09850 Type VI secretion system protein DotU 53 255 1.1E-55 T 14-10-2018 IPR017732 Type IV / VI secretion system, DotU DA442_20045 dd765ee6481f7f84f7e1c349c144f5c0 433 Pfam PF00691 OmpA family 325 423 4.3E-15 T 14-10-2018 IPR006665 OmpA-like domain DA442_08745 92aec7af3383600929b50355a563740c 216 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 144 159 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DA442_08745 92aec7af3383600929b50355a563740c 216 Pfam PF00813 FliP family 14 211 2.3E-68 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DA442_08745 92aec7af3383600929b50355a563740c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 165 186 7.8E-71 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DA442_08745 92aec7af3383600929b50355a563740c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 189 214 7.8E-71 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DA442_08745 92aec7af3383600929b50355a563740c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 50 69 7.8E-71 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DA442_08745 92aec7af3383600929b50355a563740c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 30 50 7.8E-71 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DA442_08745 92aec7af3383600929b50355a563740c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 144 164 7.8E-71 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DA442_08745 92aec7af3383600929b50355a563740c 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 11 30 7.8E-71 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DA442_08745 92aec7af3383600929b50355a563740c 216 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 192 204 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DA442_08745 92aec7af3383600929b50355a563740c 216 TIGRFAM TIGR01102 yscR: type III secretion apparatus protein, YscR/HrcR family 10 211 8.3E-92 T 14-10-2018 IPR005773 Yop virulence translocation protein R GO:0015031|GO:0016021 DA442_09020 c36ce31c5335b0d7d31bf844314ea017 335 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 34 317 7.9E-51 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 DA442_09020 c36ce31c5335b0d7d31bf844314ea017 335 SUPERFAMILY SSF53850 28 332 9.77E-89 T 14-10-2018 DA442_09020 c36ce31c5335b0d7d31bf844314ea017 335 Gene3D G3DSA:3.40.190.10 29 330 2.1E-139 T 14-10-2018 DA442_09020 c36ce31c5335b0d7d31bf844314ea017 335 Gene3D G3DSA:3.40.190.100 117 258 2.1E-139 T 14-10-2018 DA442_14315 a518815ee07b586a806be0127c771a50 426 Gene3D G3DSA:3.30.465.10 340 418 6.6E-27 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DA442_14315 a518815ee07b586a806be0127c771a50 426 Gene3D G3DSA:3.10.580.10 201 330 1.3E-40 T 14-10-2018 DA442_14315 a518815ee07b586a806be0127c771a50 426 Pfam PF03471 Transporter associated domain 344 418 1.3E-17 T 14-10-2018 IPR005170 Transporter-associated domain DA442_14315 a518815ee07b586a806be0127c771a50 426 SMART SM01091 342 420 2.2E-24 T 14-10-2018 IPR005170 Transporter-associated domain DA442_14315 a518815ee07b586a806be0127c771a50 426 Pfam PF00571 CBS domain 278 325 2.7E-5 T 14-10-2018 IPR000644 CBS domain DA442_14315 a518815ee07b586a806be0127c771a50 426 SUPERFAMILY SSF56176 340 423 1.83E-21 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DA442_14315 a518815ee07b586a806be0127c771a50 426 SUPERFAMILY SSF54631 192 329 3.92E-24 T 14-10-2018 DA442_14315 a518815ee07b586a806be0127c771a50 426 Pfam PF01595 Domain of unknown function DUF21 13 181 3.2E-49 T 14-10-2018 IPR002550 CNNM, transmembrane domain DA442_02470 6dec01e1da8b4d0353d37b5161d940bc 470 SUPERFAMILY SSF46548 6 157 1.36E-40 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DA442_02470 6dec01e1da8b4d0353d37b5161d940bc 470 SUPERFAMILY SSF51971 145 399 5.89E-69 T 14-10-2018 DA442_02470 6dec01e1da8b4d0353d37b5161d940bc 470 Gene3D G3DSA:3.50.50.60 250 398 1.9E-44 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_02470 6dec01e1da8b4d0353d37b5161d940bc 470 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 470 1.7E-251 T 14-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 DA442_02470 6dec01e1da8b4d0353d37b5161d940bc 470 Gene3D G3DSA:1.10.1060.10 11 146 3.5E-35 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DA442_02470 6dec01e1da8b4d0353d37b5161d940bc 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 457 6.6E-23 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DA442_02470 6dec01e1da8b4d0353d37b5161d940bc 470 Gene3D G3DSA:3.50.50.60 147 249 5.4E-10 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_02470 6dec01e1da8b4d0353d37b5161d940bc 470 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 7.0E-39 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 DA442_02470 6dec01e1da8b4d0353d37b5161d940bc 470 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 2.2E-36 T 14-10-2018 DA442_02470 6dec01e1da8b4d0353d37b5161d940bc 470 PRINTS PR00419 Adrenodoxin reductase family signature 288 302 2.2E-36 T 14-10-2018 DA442_02470 6dec01e1da8b4d0353d37b5161d940bc 470 PRINTS PR00419 Adrenodoxin reductase family signature 322 335 2.2E-36 T 14-10-2018 DA442_02470 6dec01e1da8b4d0353d37b5161d940bc 470 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 2.2E-36 T 14-10-2018 DA442_02470 6dec01e1da8b4d0353d37b5161d940bc 470 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 2.2E-36 T 14-10-2018 DA442_20825 835dd50ae0444b8f615c8b2ebf8ae0ca 589 SMART SM00283 324 585 7.6E-58 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_20825 835dd50ae0444b8f615c8b2ebf8ae0ca 589 Gene3D G3DSA:1.10.287.950 255 587 1.1E-63 T 14-10-2018 DA442_20825 835dd50ae0444b8f615c8b2ebf8ae0ca 589 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 372 551 2.4E-39 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_20825 835dd50ae0444b8f615c8b2ebf8ae0ca 589 SUPERFAMILY SSF58104 278 586 7.19E-68 T 14-10-2018 DA442_06745 dff503430a806c17780dd7c12d65a1e4 407 Gene3D G3DSA:1.20.1250.20 5 389 5.4E-46 T 14-10-2018 DA442_06745 dff503430a806c17780dd7c12d65a1e4 407 Pfam PF07690 Major Facilitator Superfamily 16 352 1.7E-34 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DA442_06745 dff503430a806c17780dd7c12d65a1e4 407 SUPERFAMILY SSF103473 9 387 3.14E-53 T 14-10-2018 IPR036259 MFS transporter superfamily DA442_06745 dff503430a806c17780dd7c12d65a1e4 407 ProSitePatterns PS00216 Sugar transport proteins signature 1. 66 82 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DA442_21000 073573455fbdab513bfeb40d9677e3c4 365 Gene3D G3DSA:3.40.50.2300 33 363 8.8E-149 T 14-10-2018 DA442_21000 073573455fbdab513bfeb40d9677e3c4 365 Gene3D G3DSA:3.40.50.2300 180 359 8.8E-149 T 14-10-2018 DA442_21000 073573455fbdab513bfeb40d9677e3c4 365 Pfam PF13407 Periplasmic binding protein domain 69 324 8.4E-15 T 14-10-2018 IPR025997 Periplasmic binding protein DA442_21000 073573455fbdab513bfeb40d9677e3c4 365 SUPERFAMILY SSF53822 27 364 8.06E-84 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DA442_01480 c79b300d389d473d91e755b7152d36e5 105 Gene3D G3DSA:2.30.30.30 2 104 8.6E-40 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 DA442_01480 c79b300d389d473d91e755b7152d36e5 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 102 5.9E-23 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01480 c79b300d389d473d91e755b7152d36e5 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 20.041 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01480 c79b300d389d473d91e755b7152d36e5 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 7.7E-40 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01480 c79b300d389d473d91e755b7152d36e5 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 14-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_01480 c79b300d389d473d91e755b7152d36e5 105 Pfam PF00467 KOW motif 8 37 7.8E-6 T 14-10-2018 IPR005824 KOW DA442_01480 c79b300d389d473d91e755b7152d36e5 105 SUPERFAMILY SSF50104 4 101 5.16E-34 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily DA442_01480 c79b300d389d473d91e755b7152d36e5 105 SMART SM00739 4 31 3.4E-4 T 14-10-2018 IPR005824 KOW DA442_19520 d99726a5e487336a8f19b79d82d8b88c 126 Gene3D G3DSA:2.40.50.200 23 126 8.9E-16 T 14-10-2018 IPR036700 Bacterial OB-fold superfamily DA442_19520 d99726a5e487336a8f19b79d82d8b88c 126 Pfam PF04076 Bacterial OB fold (BOF) protein 47 123 2.8E-9 T 14-10-2018 IPR005220 Bacterial OB-fold DA442_19520 d99726a5e487336a8f19b79d82d8b88c 126 SUPERFAMILY SSF101756 26 125 1.7E-22 T 14-10-2018 IPR036700 Bacterial OB-fold superfamily DA442_03540 97ef3e0d2ed32278d54a67403e69bf8e 315 Gene3D G3DSA:3.30.1330.60 154 302 9.7E-53 T 14-10-2018 IPR036737 OmpA-like domain superfamily DA442_03540 97ef3e0d2ed32278d54a67403e69bf8e 315 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 13 58 2.3E-17 T 14-10-2018 IPR025713 Motility protein B, N-terminal domain DA442_03540 97ef3e0d2ed32278d54a67403e69bf8e 315 SUPERFAMILY SSF103088 183 300 6.02E-30 T 14-10-2018 IPR036737 OmpA-like domain superfamily DA442_03540 97ef3e0d2ed32278d54a67403e69bf8e 315 Pfam PF00691 OmpA family 196 294 1.8E-17 T 14-10-2018 IPR006665 OmpA-like domain DA442_00865 7b0dfffb968d9e34d244bb0f17431bd0 453 PIRSF PIRSF037714 2 453 6.7E-171 T 14-10-2018 IPR017270 Putative MotA/TolQ/ExbB family protein DA442_00865 7b0dfffb968d9e34d244bb0f17431bd0 453 Pfam PF01618 MotA/TolQ/ExbB proton channel family 317 434 2.7E-28 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel DA442_18745 1c24ac8c384d739c978d5d924acb4760 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 1.7E-23 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DA442_18745 1c24ac8c384d739c978d5d924acb4760 128 Gene3D G3DSA:3.10.180.10 1 128 5.8E-47 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DA442_18745 1c24ac8c384d739c978d5d924acb4760 128 SUPERFAMILY SSF54593 1 126 1.34E-35 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DA442_18745 1c24ac8c384d739c978d5d924acb4760 128 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 DA442_18745 1c24ac8c384d739c978d5d924acb4760 128 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 128 8.9E-58 T 14-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 DA442_18115 4ef9ef8866dbdaffda59c5bd3cfa3244 364 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 8 350 3.2E-135 T 14-10-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 DA442_18115 4ef9ef8866dbdaffda59c5bd3cfa3244 364 Gene3D G3DSA:3.40.50.970 1 351 6.8E-102 T 14-10-2018 DA442_18115 4ef9ef8866dbdaffda59c5bd3cfa3244 364 Pfam PF00676 Dehydrogenase E1 component 36 328 1.2E-74 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 DA442_18115 4ef9ef8866dbdaffda59c5bd3cfa3244 364 SUPERFAMILY SSF52518 22 357 3.79E-92 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DA442_12270 b7c0ba0c102cf187305cc452d2dfba05 258 Pfam PF04333 MlaA lipoprotein 41 233 7.5E-63 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 DA442_12270 b7c0ba0c102cf187305cc452d2dfba05 258 PRINTS PR01805 VacJ lipoprotein signature 43 56 5.0E-29 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 DA442_12270 b7c0ba0c102cf187305cc452d2dfba05 258 PRINTS PR01805 VacJ lipoprotein signature 112 129 5.0E-29 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 DA442_12270 b7c0ba0c102cf187305cc452d2dfba05 258 PRINTS PR01805 VacJ lipoprotein signature 149 166 5.0E-29 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 DA442_12270 b7c0ba0c102cf187305cc452d2dfba05 258 PRINTS PR01805 VacJ lipoprotein signature 61 77 5.0E-29 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 DA442_03525 2a45a0d064ed1cfdc92e6f6f40b91c3e 294 Pfam PF00348 Polyprenyl synthetase 29 270 8.2E-58 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 DA442_03525 2a45a0d064ed1cfdc92e6f6f40b91c3e 294 SUPERFAMILY SSF48576 3 285 7.2E-86 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily DA442_03525 2a45a0d064ed1cfdc92e6f6f40b91c3e 294 Gene3D G3DSA:1.10.600.10 1 294 9.9E-113 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily DA442_03525 2a45a0d064ed1cfdc92e6f6f40b91c3e 294 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site DA442_03525 2a45a0d064ed1cfdc92e6f6f40b91c3e 294 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 79 95 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site DA442_05335 8bdadfe827baae286750706d631a5961 82 Gene3D G3DSA:1.10.1900.30 8 76 3.9E-36 T 14-10-2018 IPR038191 YciN superfamily DA442_05335 8bdadfe827baae286750706d631a5961 82 Pfam PF10692 Protein of unknown function (DUF2498) 4 80 3.5E-42 T 14-10-2018 IPR019633 Protein of unknown function DUF2498 DA442_04685 19f033be430806d69da95ba995419bf2 259 SUPERFAMILY SSF69593 5 253 1.57E-23 T 14-10-2018 DA442_04685 19f033be430806d69da95ba995419bf2 259 SMART SM00563 90 200 6.6E-13 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DA442_04685 19f033be430806d69da95ba995419bf2 259 Pfam PF01553 Acyltransferase 79 193 1.0E-14 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DA442_23730 94460a3b06e81e1e77c398acb41ce3ce 109 Pfam PF13642 protein structure with unknown function 8 107 8.1E-35 T 14-10-2018 IPR025284 Protein of unknown function DUF4144 DA442_23730 94460a3b06e81e1e77c398acb41ce3ce 109 Gene3D G3DSA:2.40.10.320 2 63 3.4E-7 T 14-10-2018 DA442_04530 5ef215bef5410c0e8605ed75bf6d2316 233 SUPERFAMILY SSF53067 4 107 4.27E-32 T 14-10-2018 DA442_04530 5ef215bef5410c0e8605ed75bf6d2316 233 Gene3D G3DSA:3.30.420.40 5 202 9.0E-88 T 14-10-2018 DA442_04530 5ef215bef5410c0e8605ed75bf6d2316 233 Pfam PF00814 Glycoprotease family 30 174 1.8E-32 T 14-10-2018 IPR000905 Gcp-like domain DA442_04530 5ef215bef5410c0e8605ed75bf6d2316 233 SUPERFAMILY SSF53067 111 219 3.88E-28 T 14-10-2018 DA442_04530 5ef215bef5410c0e8605ed75bf6d2316 233 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 221 7.7E-70 T 14-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 DA442_04530 5ef215bef5410c0e8605ed75bf6d2316 233 Gene3D G3DSA:3.30.420.40 96 190 9.0E-88 T 14-10-2018 DA442_08115 01d8f9b48a3ece5ffc3dac35549faad3 208 Pfam PF02613 Nitrate reductase delta subunit 43 156 5.2E-31 T 14-10-2018 IPR020945 DMSO/Nitrate reductase chaperone DA442_08115 01d8f9b48a3ece5ffc3dac35549faad3 208 SUPERFAMILY SSF89155 4 189 8.76E-53 T 14-10-2018 IPR036411 TorD-like superfamily DA442_08115 01d8f9b48a3ece5ffc3dac35549faad3 208 Gene3D G3DSA:1.10.3480.10 1 195 2.5E-41 T 14-10-2018 DA442_00715 e905f2c67162ec8c2090ba120c58ac7f 198 Pfam PF12019 Type II transport protein GspH 42 179 2.8E-8 T 14-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 DA442_00715 e905f2c67162ec8c2090ba120c58ac7f 198 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 3.7E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DA442_00715 e905f2c67162ec8c2090ba120c58ac7f 198 Gene3D G3DSA:3.55.40.10 36 107 9.6E-20 T 14-10-2018 DA442_00715 e905f2c67162ec8c2090ba120c58ac7f 198 Gene3D G3DSA:3.55.40.10 108 192 7.8E-22 T 14-10-2018 DA442_00715 e905f2c67162ec8c2090ba120c58ac7f 198 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 3 166 9.5E-13 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 DA442_00715 e905f2c67162ec8c2090ba120c58ac7f 198 PRINTS PR00885 Bacterial general secretion pathway protein H signature 2 16 7.0E-21 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 DA442_00715 e905f2c67162ec8c2090ba120c58ac7f 198 PRINTS PR00885 Bacterial general secretion pathway protein H signature 17 31 7.0E-21 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 DA442_00715 e905f2c67162ec8c2090ba120c58ac7f 198 PRINTS PR00885 Bacterial general secretion pathway protein H signature 142 157 7.0E-21 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 DA442_00715 e905f2c67162ec8c2090ba120c58ac7f 198 SUPERFAMILY SSF54523 7 98 5.73E-10 T 14-10-2018 DA442_00715 e905f2c67162ec8c2090ba120c58ac7f 198 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 5.5E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DA442_15195 dbd9f4d2eba7d03dc515d048736cd245 447 SUPERFAMILY SSF111283 12 447 1.96E-129 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 DA442_15195 dbd9f4d2eba7d03dc515d048736cd245 447 Gene3D G3DSA:3.30.2290.10 7 232 1.4E-83 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal DA442_15195 dbd9f4d2eba7d03dc515d048736cd245 447 Pfam PF01523 Putative modulator of DNA gyrase 32 324 9.2E-61 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 DA442_12250 00714bac76df102ea4b05d91c85566ae 191 Pfam PF08281 Sigma-70, region 4 123 175 1.1E-9 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DA442_12250 00714bac76df102ea4b05d91c85566ae 191 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 55 86 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DA442_12250 00714bac76df102ea4b05d91c85566ae 191 Gene3D G3DSA:1.10.1740.10 13 95 2.4E-18 T 14-10-2018 DA442_12250 00714bac76df102ea4b05d91c85566ae 191 Pfam PF04542 Sigma-70 region 2 33 99 2.1E-17 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DA442_12250 00714bac76df102ea4b05d91c85566ae 191 Gene3D G3DSA:1.10.10.10 118 181 1.3E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_12250 00714bac76df102ea4b05d91c85566ae 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 30 179 2.1E-22 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DA442_12250 00714bac76df102ea4b05d91c85566ae 191 SUPERFAMILY SSF88659 120 180 2.62E-12 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DA442_12250 00714bac76df102ea4b05d91c85566ae 191 SUPERFAMILY SSF88946 27 109 5.49E-21 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DA442_07470 dcc62aec476f24320d5a5ae63c3f57e9 531 Pfam PF11230 Protein of unknown function (DUF3029) 39 520 6.0E-230 T 14-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted DA442_07470 dcc62aec476f24320d5a5ae63c3f57e9 531 SUPERFAMILY SSF51998 43 486 3.97E-96 T 14-10-2018 DA442_07470 dcc62aec476f24320d5a5ae63c3f57e9 531 TIGRFAM TIGR04040 glycyl_YjjI: glycine radical enzyme, YjjI family 29 520 2.6E-231 T 14-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted DA442_07470 dcc62aec476f24320d5a5ae63c3f57e9 531 PIRSF PIRSF028991 23 531 1.0E-292 T 14-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted DA442_18305 7967c709270ab0c173f8a358d6e55bda 320 Pfam PF01882 Protein of unknown function DUF58 58 143 5.4E-20 T 14-10-2018 IPR002881 Domain of unknown function DUF58 DA442_11480 af7c8f4da6158a4a3bce4dc9faef85a7 210 SUPERFAMILY SSF52540 2 209 2.28E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_11480 af7c8f4da6158a4a3bce4dc9faef85a7 210 Hamap MF_00165 Thymidylate kinase [tmk]. 5 207 27.828 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 DA442_11480 af7c8f4da6158a4a3bce4dc9faef85a7 210 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 199 6.9E-63 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 DA442_11480 af7c8f4da6158a4a3bce4dc9faef85a7 210 ProSitePatterns PS01331 Thymidylate kinase signature. 96 108 - T 14-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 DA442_11480 af7c8f4da6158a4a3bce4dc9faef85a7 210 Pfam PF02223 Thymidylate kinase 9 199 1.6E-58 T 14-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 DA442_11480 af7c8f4da6158a4a3bce4dc9faef85a7 210 Gene3D G3DSA:3.40.50.300 4 209 4.0E-63 T 14-10-2018 DA442_22360 519da08e55b08e52d9d65309000b17cb 307 Gene3D G3DSA:3.40.190.290 91 294 8.8E-57 T 14-10-2018 DA442_22360 519da08e55b08e52d9d65309000b17cb 307 SUPERFAMILY SSF46785 4 112 3.19E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_22360 519da08e55b08e52d9d65309000b17cb 307 SUPERFAMILY SSF53850 89 296 3.08E-40 T 14-10-2018 DA442_22360 519da08e55b08e52d9d65309000b17cb 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_22360 519da08e55b08e52d9d65309000b17cb 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_22360 519da08e55b08e52d9d65309000b17cb 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_22360 519da08e55b08e52d9d65309000b17cb 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.2E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_22360 519da08e55b08e52d9d65309000b17cb 307 Gene3D G3DSA:1.10.10.10 1 90 5.2E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_22360 519da08e55b08e52d9d65309000b17cb 307 Pfam PF03466 LysR substrate binding domain 88 294 1.3E-38 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_13260 babae763745178798f486980c4502268 150 SUPERFAMILY SSF51197 1 143 5.22E-24 T 14-10-2018 DA442_13260 babae763745178798f486980c4502268 150 Pfam PF04074 Domain of unknown function (DUF386) 3 140 2.6E-25 T 14-10-2018 IPR004375 YhcH/YjgK/YiaL family DA442_13260 babae763745178798f486980c4502268 150 Gene3D G3DSA:2.60.120.370 1 143 1.7E-13 T 14-10-2018 IPR037012 YhcH/YjgK/YiaL superfamily DA442_12275 eae45b48cfb74077629af4a216b9fac9 405 Gene3D G3DSA:1.25.40.10 153 291 1.9E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_12275 eae45b48cfb74077629af4a216b9fac9 405 Pfam PF14559 Tetratricopeptide repeat 176 244 5.2E-8 T 14-10-2018 DA442_12275 eae45b48cfb74077629af4a216b9fac9 405 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 3 116 3.1E-31 T 14-10-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI DA442_12275 eae45b48cfb74077629af4a216b9fac9 405 SUPERFAMILY SSF48452 161 265 1.3E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_07920 b39b7d1ee39c5c898d38d968b8fbe6b3 114 Gene3D G3DSA:1.20.120.160 1 106 8.7E-19 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 DA442_07920 b39b7d1ee39c5c898d38d968b8fbe6b3 114 SUPERFAMILY SSF47226 2 106 3.01E-20 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 DA442_07920 b39b7d1ee39c5c898d38d968b8fbe6b3 114 Pfam PF01627 Hpt domain 22 97 5.0E-12 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 DA442_05310 dcb4525c3e58b45274dc0b85d99859d5 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.7E-27 T 14-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 DA442_05310 dcb4525c3e58b45274dc0b85d99859d5 72 SMART SM00316 4 72 4.8E-6 T 14-10-2018 IPR022967 RNA-binding domain, S1 DA442_05310 dcb4525c3e58b45274dc0b85d99859d5 72 SUPERFAMILY SSF50249 1 70 9.43E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_05310 dcb4525c3e58b45274dc0b85d99859d5 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 1.5E-38 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 DA442_05310 dcb4525c3e58b45274dc0b85d99859d5 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.238 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 DA442_05310 dcb4525c3e58b45274dc0b85d99859d5 72 Gene3D G3DSA:2.40.50.140 1 72 8.4E-37 T 14-10-2018 DA442_18200 9b508c3bf2d053c8c87a376f7bf33572 93 PIRSF PIRSF028291 1 93 7.5E-27 T 14-10-2018 IPR014543 Uncharacterised conserved protein UCP028291 DA442_18200 9b508c3bf2d053c8c87a376f7bf33572 93 Gene3D G3DSA:3.30.310.50 1 93 2.1E-25 T 14-10-2018 DA442_18200 9b508c3bf2d053c8c87a376f7bf33572 93 Pfam PF09981 Uncharacterized protein conserved in bacteria (DUF2218) 6 91 3.1E-26 T 14-10-2018 IPR014543 Uncharacterised conserved protein UCP028291 DA442_22415 458a4a3311c8d71c5b0355c59a08cf04 213 Pfam PF01914 MarC family integral membrane protein 8 206 1.1E-52 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 DA442_22415 458a4a3311c8d71c5b0355c59a08cf04 213 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 8 203 1.2E-49 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 DA442_13500 4f885167fb98a4068e525cda7c256e57 515 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 13 112 2.0E-10 T 14-10-2018 IPR000014 PAS domain DA442_13500 4f885167fb98a4068e525cda7c256e57 515 SUPERFAMILY SSF58104 259 514 4.71E-67 T 14-10-2018 DA442_13500 4f885167fb98a4068e525cda7c256e57 515 Gene3D G3DSA:3.30.450.20 4 144 2.4E-24 T 14-10-2018 DA442_13500 4f885167fb98a4068e525cda7c256e57 515 Gene3D G3DSA:1.10.287.950 191 515 2.6E-62 T 14-10-2018 DA442_13500 4f885167fb98a4068e525cda7c256e57 515 SUPERFAMILY SSF55785 15 112 1.48E-23 T 14-10-2018 IPR035965 PAS domain superfamily DA442_13500 4f885167fb98a4068e525cda7c256e57 515 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 329 480 1.5E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_13500 4f885167fb98a4068e525cda7c256e57 515 SMART SM00283 253 514 5.2E-67 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_13500 4f885167fb98a4068e525cda7c256e57 515 Pfam PF08447 PAS fold 27 112 1.8E-15 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 DA442_03460 a3909d0e11e468f2fd9dc8dab03d78cd 415 Hamap MF_01063 Esterase FrsA [frsA]. 4 415 54.308 T 14-10-2018 IPR010520 UPF0255 family DA442_03460 a3909d0e11e468f2fd9dc8dab03d78cd 415 Gene3D G3DSA:3.40.50.1820 18 415 9.9E-111 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_03460 a3909d0e11e468f2fd9dc8dab03d78cd 415 SUPERFAMILY SSF53474 47 411 1.34E-42 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_03460 a3909d0e11e468f2fd9dc8dab03d78cd 415 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 5 414 8.5E-235 T 14-10-2018 IPR010520 UPF0255 family DA442_25665 474336aacbf58f434fd2d624411ba32c 351 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 13 342 5.2E-137 T 14-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 DA442_25665 474336aacbf58f434fd2d624411ba32c 351 Gene3D G3DSA:1.20.1530.20 3 342 4.1E-23 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily DA442_25665 474336aacbf58f434fd2d624411ba32c 351 PIRSF PIRSF005508 1 351 7.3E-135 T 14-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 DA442_25665 474336aacbf58f434fd2d624411ba32c 351 Pfam PF01758 Sodium Bile acid symporter family 58 254 4.0E-61 T 14-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 DA442_10640 670e22f9898ae47eceb86c09d2f94d0b 179 Gene3D G3DSA:3.90.1520.10 1 178 7.7E-57 T 14-10-2018 IPR038158 H-NOX domain superfamily GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 DA442_10640 670e22f9898ae47eceb86c09d2f94d0b 179 SUPERFAMILY SSF111126 1 176 4.97E-51 T 14-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily DA442_10640 670e22f9898ae47eceb86c09d2f94d0b 179 Pfam PF07700 Haem-NO-binding 2 162 4.3E-38 T 14-10-2018 IPR011644 Heme NO-binding GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 DA442_05690 470181e945527855d6ec7890d8569533 208 SUPERFAMILY SSF89392 30 207 1.65E-51 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX DA442_05690 470181e945527855d6ec7890d8569533 208 Gene3D G3DSA:2.50.20.10 25 207 9.9E-48 T 14-10-2018 DA442_05690 470181e945527855d6ec7890d8569533 208 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 13 206 31.901 T 14-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 DA442_05690 470181e945527855d6ec7890d8569533 208 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 12 207 5.6E-63 T 14-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 DA442_05690 470181e945527855d6ec7890d8569533 208 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 39 196 6.1E-56 T 14-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like DA442_20585 af6176d09509820ea6e404e3f0339c2a 332 Gene3D G3DSA:3.40.50.970 21 203 2.6E-27 T 14-10-2018 DA442_20585 af6176d09509820ea6e404e3f0339c2a 332 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 52 199 8.0E-33 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 DA442_20585 af6176d09509820ea6e404e3f0339c2a 332 SUPERFAMILY SSF52518 15 330 3.93E-77 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DA442_24430 1e2c949966734c39a5cf9101a8088901 302 SUPERFAMILY SSF103481 49 139 1.96E-6 T 14-10-2018 DA442_24430 1e2c949966734c39a5cf9101a8088901 302 SUPERFAMILY SSF103481 202 298 1.01E-6 T 14-10-2018 DA442_24430 1e2c949966734c39a5cf9101a8088901 302 TIGRFAM TIGR03340 phn_DUF6: phosphonate utilization associated putative membrane protein 4 297 7.6E-100 T 14-10-2018 IPR017725 Phosphonate utilization associated transmembrane protein, putative DA442_24430 1e2c949966734c39a5cf9101a8088901 302 Pfam PF00892 EamA-like transporter family 152 298 8.2E-7 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DA442_22325 4f24bc74c29baa3bdd7f355264ef1a98 232 SUPERFAMILY SSF81324 130 224 1.57E-18 T 14-10-2018 DA442_22325 4f24bc74c29baa3bdd7f355264ef1a98 232 Pfam PF07885 Ion channel 138 221 1.4E-17 T 14-10-2018 IPR013099 Potassium channel domain DA442_22325 4f24bc74c29baa3bdd7f355264ef1a98 232 Gene3D G3DSA:1.10.287.70 127 231 5.1E-21 T 14-10-2018 DA442_00490 957047f9403a46f22e11b872210efd65 514 Pfam PF02646 RmuC family 181 477 1.1E-106 T 14-10-2018 IPR003798 DNA recombination RmuC DA442_13415 5c40e574ea2742f9cba8e6a6642507af 258 SMART SM01133 10 244 1.3E-78 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 DA442_13415 5c40e574ea2742f9cba8e6a6642507af 258 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 230 8.5E-81 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 DA442_13415 5c40e574ea2742f9cba8e6a6642507af 258 Pfam PF01791 DeoC/LacD family aldolase 11 239 2.8E-48 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 DA442_13415 5c40e574ea2742f9cba8e6a6642507af 258 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 258 52.842 T 14-10-2018 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 DA442_13415 5c40e574ea2742f9cba8e6a6642507af 258 SUPERFAMILY SSF51569 6 245 1.15E-82 T 14-10-2018 DA442_13415 5c40e574ea2742f9cba8e6a6642507af 258 PIRSF PIRSF001357 5 251 1.6E-76 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 DA442_13415 5c40e574ea2742f9cba8e6a6642507af 258 Gene3D G3DSA:3.20.20.70 1 256 2.0E-101 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_24625 c6c7372634f6e71506d31bf5bcdb5381 132 Gene3D G3DSA:3.90.1590.10 1 116 8.7E-20 T 14-10-2018 DA442_24625 c6c7372634f6e71506d31bf5bcdb5381 132 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 26 112 1.7E-19 T 14-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 DA442_24625 c6c7372634f6e71506d31bf5bcdb5381 132 SUPERFAMILY SSF51316 2 131 2.09E-43 T 14-10-2018 IPR011057 Mss4-like superfamily DA442_06300 474c6559275e3cbc79cfda229e702876 383 Pfam PF06965 Na+/H+ antiporter 1 7 373 3.7E-145 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 DA442_06300 474c6559275e3cbc79cfda229e702876 383 Gene3D G3DSA:1.20.1530.10 3 381 1.8E-148 T 14-10-2018 IPR023171 Na/H antiporter domain superfamily DA442_06300 474c6559275e3cbc79cfda229e702876 383 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 373 1.3E-194 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 DA442_06300 474c6559275e3cbc79cfda229e702876 383 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 380 23.634 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 DA442_05670 2d8091b1ef851d474f31b3762c91416b 398 Pfam PF13679 Methyltransferase domain 108 230 9.4E-18 T 14-10-2018 IPR025714 Methyltransferase domain DA442_05670 2d8091b1ef851d474f31b3762c91416b 398 SUPERFAMILY SSF53335 118 197 2.96E-6 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_05670 2d8091b1ef851d474f31b3762c91416b 398 Gene3D G3DSA:3.40.50.150 81 242 1.8E-5 T 14-10-2018 DA442_13760 66eaebaf5ce9d02ba81899f55ba12fdc 302 Gene3D G3DSA:3.30.420.10 46 217 1.2E-29 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DA442_13760 66eaebaf5ce9d02ba81899f55ba12fdc 302 SUPERFAMILY SSF53098 49 220 8.13E-40 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DA442_13760 66eaebaf5ce9d02ba81899f55ba12fdc 302 Pfam PF00929 Exonuclease 53 207 7.3E-13 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DA442_13760 66eaebaf5ce9d02ba81899f55ba12fdc 302 SMART SM00479 51 217 6.7E-14 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DA442_05580 beb5f67ec69e8ffc1b8ab7826896811c 565 Pfam PF00589 Phage integrase family 400 534 4.4E-8 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DA442_05580 beb5f67ec69e8ffc1b8ab7826896811c 565 SUPERFAMILY SSF56349 232 554 2.83E-37 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DA442_05580 beb5f67ec69e8ffc1b8ab7826896811c 565 Gene3D G3DSA:1.10.150.130 226 363 2.1E-10 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal DA442_05580 beb5f67ec69e8ffc1b8ab7826896811c 565 Gene3D G3DSA:1.10.443.10 377 560 6.1E-17 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DA442_21645 37aba99c77ac639f4dd3092b20056413 1171 SUPERFAMILY SSF56935 865 1145 2.38E-8 T 14-10-2018 DA442_00430 5abf2ff5858f75a5b2e5b860c658680c 58 Pfam PF07043 Protein of unknown function (DUF1328) 7 44 7.7E-11 T 14-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 DA442_00430 5abf2ff5858f75a5b2e5b860c658680c 58 PIRSF PIRSF036466 1 55 4.1E-20 T 14-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 DA442_00430 5abf2ff5858f75a5b2e5b860c658680c 58 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 56 16.217 T 14-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 DA442_06910 536d67c117598ed29781917c41ff25bd 536 PIRSF PIRSF002741 1 536 8.8E-104 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DA442_06910 536d67c117598ed29781917c41ff25bd 536 Gene3D G3DSA:3.90.76.10 68 191 4.8E-167 T 14-10-2018 DA442_06910 536d67c117598ed29781917c41ff25bd 536 SUPERFAMILY SSF53850 33 529 3.26E-128 T 14-10-2018 DA442_06910 536d67c117598ed29781917c41ff25bd 536 Gene3D G3DSA:3.10.105.10 294 505 4.8E-167 T 14-10-2018 DA442_06910 536d67c117598ed29781917c41ff25bd 536 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 458 4.4E-87 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain DA442_06910 536d67c117598ed29781917c41ff25bd 536 Gene3D G3DSA:3.40.190.10 39 517 4.8E-167 T 14-10-2018 DA442_05465 b6a8c8adbf191abeed4cef7ff26bb116 483 SUPERFAMILY SSF58104 240 479 2.22E-46 T 14-10-2018 DA442_05465 b6a8c8adbf191abeed4cef7ff26bb116 483 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 405 434 4.4E-26 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DA442_05465 b6a8c8adbf191abeed4cef7ff26bb116 483 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 251 280 4.4E-26 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DA442_05465 b6a8c8adbf191abeed4cef7ff26bb116 483 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 328 355 4.4E-26 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DA442_05465 b6a8c8adbf191abeed4cef7ff26bb116 483 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 357 386 4.4E-26 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DA442_05465 b6a8c8adbf191abeed4cef7ff26bb116 483 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 289 442 3.6E-34 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_05465 b6a8c8adbf191abeed4cef7ff26bb116 483 SMART SM00283 244 477 2.3E-38 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_05465 b6a8c8adbf191abeed4cef7ff26bb116 483 Gene3D G3DSA:1.10.287.950 180 481 1.0E-49 T 14-10-2018 DA442_17320 935d3acfe2e992a6ee412280b45a887d 364 SMART SM00257 39 87 1.8E-4 T 14-10-2018 IPR018392 LysM domain DA442_17320 935d3acfe2e992a6ee412280b45a887d 364 SUPERFAMILY SSF54106 38 86 8.89E-7 T 14-10-2018 DA442_17320 935d3acfe2e992a6ee412280b45a887d 364 Pfam PF01476 LysM domain 40 85 2.2E-12 T 14-10-2018 IPR018392 LysM domain DA442_17320 935d3acfe2e992a6ee412280b45a887d 364 Gene3D G3DSA:3.10.350.10 38 85 1.5E-14 T 14-10-2018 IPR036779 LysM domain superfamily DA442_04420 881f8546a1215b3d7473f0cee20afff1 130 PIRSF PIRSF000178 2 130 1.3E-32 T 14-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DA442_04420 881f8546a1215b3d7473f0cee20afff1 130 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 11 35 - T 14-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DA442_04420 881f8546a1215b3d7473f0cee20afff1 130 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 9 127 2.0E-39 T 14-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DA442_04420 881f8546a1215b3d7473f0cee20afff1 130 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 8 124 2.5E-28 T 14-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DA442_04420 881f8546a1215b3d7473f0cee20afff1 130 Gene3D G3DSA:1.20.1300.10 5 130 1.5E-43 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DA442_04420 881f8546a1215b3d7473f0cee20afff1 130 SUPERFAMILY SSF81343 8 130 4.41E-34 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DA442_04420 881f8546a1215b3d7473f0cee20afff1 130 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 86 99 - T 14-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DA442_22150 b7a958dae37603f25805ec7284b6e8d4 252 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 55 251 2.2E-76 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DA442_22150 b7a958dae37603f25805ec7284b6e8d4 252 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 180 195 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DA442_22150 b7a958dae37603f25805ec7284b6e8d4 252 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 228 240 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DA442_22150 b7a958dae37603f25805ec7284b6e8d4 252 Pfam PF00813 FliP family 55 247 1.7E-75 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DA442_22150 b7a958dae37603f25805ec7284b6e8d4 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 180 200 6.9E-65 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DA442_22150 b7a958dae37603f25805ec7284b6e8d4 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 72 92 6.9E-65 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DA442_22150 b7a958dae37603f25805ec7284b6e8d4 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 225 250 6.9E-65 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DA442_22150 b7a958dae37603f25805ec7284b6e8d4 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 53 72 6.9E-65 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DA442_22150 b7a958dae37603f25805ec7284b6e8d4 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 92 111 6.9E-65 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DA442_22150 b7a958dae37603f25805ec7284b6e8d4 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 201 222 6.9E-65 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DA442_22150 b7a958dae37603f25805ec7284b6e8d4 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 151 163 3.8E-14 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DA442_22150 b7a958dae37603f25805ec7284b6e8d4 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 111 123 3.8E-14 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DA442_22150 b7a958dae37603f25805ec7284b6e8d4 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 123 137 3.8E-14 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DA442_22150 b7a958dae37603f25805ec7284b6e8d4 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 51 60 3.8E-14 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DA442_22150 b7a958dae37603f25805ec7284b6e8d4 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 173 185 3.8E-14 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DA442_22150 b7a958dae37603f25805ec7284b6e8d4 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 241 251 3.8E-14 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DA442_14980 40b897e75e45ff984411be94357df376 447 Pfam PF02378 Phosphotransferase system, EIIC 35 354 4.9E-64 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DA442_14980 40b897e75e45ff984411be94357df376 447 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 19 427 2.5E-112 T 14-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 DA442_14980 40b897e75e45ff984411be94357df376 447 PIRSF PIRSF006351 7 438 1.6E-146 T 14-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 DA442_22560 1f3ba88fe7c590dadd8c0a33152f34d5 358 Pfam PF03193 RsgA GTPase 91 263 3.8E-49 T 14-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 DA442_22560 1f3ba88fe7c590dadd8c0a33152f34d5 358 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 40 327 31.383 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 DA442_22560 1f3ba88fe7c590dadd8c0a33152f34d5 358 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 74 320 4.0E-50 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 DA442_22560 1f3ba88fe7c590dadd8c0a33152f34d5 358 SUPERFAMILY SSF52540 108 324 7.16E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_22560 1f3ba88fe7c590dadd8c0a33152f34d5 358 Gene3D G3DSA:3.40.50.300 94 263 5.0E-44 T 14-10-2018 DA442_22560 1f3ba88fe7c590dadd8c0a33152f34d5 358 Gene3D G3DSA:1.10.40.50 266 338 4.8E-21 T 14-10-2018 DA442_24630 d40b1bff13cc2e226d60d45720f34fc6 116 Pfam PF00581 Rhodanese-like domain 34 114 9.3E-15 T 14-10-2018 IPR001763 Rhodanese-like domain DA442_24630 d40b1bff13cc2e226d60d45720f34fc6 116 SMART SM00450 25 116 1.7E-19 T 14-10-2018 IPR001763 Rhodanese-like domain DA442_24630 d40b1bff13cc2e226d60d45720f34fc6 116 Gene3D G3DSA:3.40.250.10 24 116 4.1E-26 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily DA442_24630 d40b1bff13cc2e226d60d45720f34fc6 116 SUPERFAMILY SSF52821 29 111 6.29E-25 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily DA442_07280 1c05d593fc5c45ea543f78c0d7b8820b 28 Pfam PF11665 Protein of unknown function (DUF3265) 2 20 2.1E-7 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_01275 8e5d33ee4d2b3af4e7c89fb4ba845c5b 319 Gene3D G3DSA:3.90.25.10 166 310 1.4E-114 T 14-10-2018 DA442_01275 8e5d33ee4d2b3af4e7c89fb4ba845c5b 319 Hamap MF_00956 GDP-L-fucose synthase [fcl]. 1 312 49.08 T 14-10-2018 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase GO:0009226|GO:0016491 KEGG: 00051+1.1.1.271|KEGG: 00520+1.1.1.271|MetaCyc: PWY-66|Reactome: R-HSA-6787639 DA442_01275 8e5d33ee4d2b3af4e7c89fb4ba845c5b 319 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 228 5.9E-71 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DA442_01275 8e5d33ee4d2b3af4e7c89fb4ba845c5b 319 SUPERFAMILY SSF51735 1 317 1.09E-73 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_01275 8e5d33ee4d2b3af4e7c89fb4ba845c5b 319 Gene3D G3DSA:3.40.50.720 4 301 1.4E-114 T 14-10-2018 DA442_05900 3aa98610aafbae4b6a0b363f87e083a6 242 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 200 3.6E-7 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 DA442_05900 3aa98610aafbae4b6a0b363f87e083a6 242 SUPERFAMILY SSF56300 1 223 2.22E-30 T 14-10-2018 DA442_05900 3aa98610aafbae4b6a0b363f87e083a6 242 Gene3D G3DSA:3.60.21.10 1 236 9.9E-18 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like DA442_05900 3aa98610aafbae4b6a0b363f87e083a6 242 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 232 5.9E-104 T 14-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 DA442_05900 3aa98610aafbae4b6a0b363f87e083a6 242 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 241 121.747 T 14-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 DA442_15380 3663acf57774193b77f44ec6a3d68cd1 592 Pfam PF15864 Protein glycosylation ligase 174 199 9.1E-11 T 14-10-2018 IPR031726 Protein glycosylation ligase domain DA442_15380 3663acf57774193b77f44ec6a3d68cd1 592 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 390 579 2.1E-65 T 14-10-2018 IPR021797 Virulence factor membrane-bound polymerase, C-terminal DA442_15380 3663acf57774193b77f44ec6a3d68cd1 592 Pfam PF04932 O-Antigen ligase 221 369 6.8E-14 T 14-10-2018 IPR007016 O-antigen ligase-related DA442_05315 9a7b7988c3e7b41b1a0874b38f013ef4 233 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 105 226 1.9E-30 T 14-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 DA442_05315 9a7b7988c3e7b41b1a0874b38f013ef4 233 SUPERFAMILY SSF55729 80 232 4.93E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_05315 9a7b7988c3e7b41b1a0874b38f013ef4 233 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 6 232 37.129 T 14-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 DA442_05315 9a7b7988c3e7b41b1a0874b38f013ef4 233 PIRSF PIRSF037208 1 233 2.1E-89 T 14-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 DA442_05315 9a7b7988c3e7b41b1a0874b38f013ef4 233 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 16 86 3.7E-19 T 14-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 DA442_05880 c7515939d9f5dc2263be1c051e0b5ac5 211 SUPERFAMILY SSF101386 123 210 2.62E-25 T 14-10-2018 DA442_05880 c7515939d9f5dc2263be1c051e0b5ac5 211 Gene3D G3DSA:1.10.287.1080 120 211 1.0E-29 T 14-10-2018 DA442_05880 c7515939d9f5dc2263be1c051e0b5ac5 211 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 123 206 1.1E-31 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 DA442_05880 c7515939d9f5dc2263be1c051e0b5ac5 211 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 38 110 1.8E-31 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 DA442_05880 c7515939d9f5dc2263be1c051e0b5ac5 211 SUPERFAMILY SSF141734 14 124 9.81E-46 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 DA442_05880 c7515939d9f5dc2263be1c051e0b5ac5 211 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 123 210 9.9E-18 T 14-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 DA442_05880 c7515939d9f5dc2263be1c051e0b5ac5 211 Gene3D G3DSA:3.10.20.400 4 102 5.2E-36 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 DA442_05880 c7515939d9f5dc2263be1c051e0b5ac5 211 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 13 211 37.817 T 14-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 DA442_05880 c7515939d9f5dc2263be1c051e0b5ac5 211 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 120 206 19.393 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 DA442_05880 c7515939d9f5dc2263be1c051e0b5ac5 211 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 61 110 4.0E-24 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 DA442_06995 af34ca4febadf3268546c3600a99734b 83 ProDom PD057771 CRO REGULATORY TRANSCRIPTION CP-933R REPRESSOR DNA-BINDING REGULATION BACTERIOPHAGE PROTEIN REGULATOR 16 74 2.0E-8 T 14-10-2018 IPR020114 Cro repressor, HK022-type DA442_06995 af34ca4febadf3268546c3600a99734b 83 SUPERFAMILY SSF47413 6 66 5.34E-5 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DA442_06995 af34ca4febadf3268546c3600a99734b 83 Gene3D G3DSA:1.10.260.40 5 80 6.4E-7 T 14-10-2018 DA442_06265 e9812e3960c3cf35619b0fd2d44a20d0 207 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 129 202 4.8E-6 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_06265 e9812e3960c3cf35619b0fd2d44a20d0 207 Gene3D G3DSA:1.10.760.10 118 206 2.4E-20 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_06265 e9812e3960c3cf35619b0fd2d44a20d0 207 SUPERFAMILY SSF46626 122 205 2.08E-14 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_06265 e9812e3960c3cf35619b0fd2d44a20d0 207 SUPERFAMILY SSF46626 37 115 4.61E-10 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_06265 e9812e3960c3cf35619b0fd2d44a20d0 207 PIRSF PIRSF000005 1 207 1.8E-30 T 14-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 DA442_06265 e9812e3960c3cf35619b0fd2d44a20d0 207 Gene3D G3DSA:1.10.760.10 30 114 7.4E-13 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_25095 137ffd87ae5d398a5ce7ebc51223ba23 354 Pfam PF00710 Asparaginase, N-terminal 29 222 6.6E-63 T 14-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 DA442_25095 137ffd87ae5d398a5ce7ebc51223ba23 354 Gene3D G3DSA:3.40.50.40 241 354 5.2E-42 T 14-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 DA442_25095 137ffd87ae5d398a5ce7ebc51223ba23 354 PIRSF PIRSF001220 24 354 8.8E-98 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DA442_25095 137ffd87ae5d398a5ce7ebc51223ba23 354 PRINTS PR00139 Asparaginase/glutaminase family signature 288 306 6.3E-24 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DA442_25095 137ffd87ae5d398a5ce7ebc51223ba23 354 PRINTS PR00139 Asparaginase/glutaminase family signature 30 41 6.3E-24 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DA442_25095 137ffd87ae5d398a5ce7ebc51223ba23 354 PRINTS PR00139 Asparaginase/glutaminase family signature 109 127 6.3E-24 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DA442_25095 137ffd87ae5d398a5ce7ebc51223ba23 354 SMART SM00870 29 348 4.0E-153 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DA442_25095 137ffd87ae5d398a5ce7ebc51223ba23 354 SUPERFAMILY SSF53774 27 352 4.06E-110 T 14-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 DA442_25095 137ffd87ae5d398a5ce7ebc51223ba23 354 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 32 40 - T 14-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 DA442_25095 137ffd87ae5d398a5ce7ebc51223ba23 354 Gene3D G3DSA:3.40.50.1170 25 240 1.0E-87 T 14-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 DA442_25095 137ffd87ae5d398a5ce7ebc51223ba23 354 PIRSF PIRSF500176 26 354 8.6E-84 T 14-10-2018 DA442_25095 137ffd87ae5d398a5ce7ebc51223ba23 354 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 15 354 4.7E-163 T 14-10-2018 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 DA442_25095 137ffd87ae5d398a5ce7ebc51223ba23 354 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 110 120 - T 14-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 DA442_17610 7563458ab3c61051b4f3ce574939d81c 85 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 23 75 5.0E-24 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor DA442_17610 7563458ab3c61051b4f3ce574939d81c 85 Pfam PF01809 Haemolytic domain 10 75 1.6E-28 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor DA442_17610 7563458ab3c61051b4f3ce574939d81c 85 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 14 82 5.6E-30 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor DA442_17610 7563458ab3c61051b4f3ce574939d81c 85 SMART SM01234 8 75 1.9E-41 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor DA442_17610 7563458ab3c61051b4f3ce574939d81c 85 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 8 76 24.437 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor DA442_16925 4584641a01918c10e04bf32d449b7919 156 SUPERFAMILY SSF88697 1 149 3.13E-63 T 14-10-2018 IPR015947 PUA-like superfamily DA442_16925 4584641a01918c10e04bf32d449b7919 156 Gene3D G3DSA:3.10.590.10 1 153 3.4E-66 T 14-10-2018 DA442_16925 4584641a01918c10e04bf32d449b7919 156 Pfam PF01878 EVE domain 2 147 1.1E-56 T 14-10-2018 IPR002740 EVE domain DA442_20630 0ad7c66a9badc1987ec3aa7ac1b1b7ff 650 Pfam PF00501 AMP-binding enzyme 21 471 1.8E-73 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DA442_20630 0ad7c66a9badc1987ec3aa7ac1b1b7ff 650 ProSitePatterns PS00455 Putative AMP-binding domain signature. 196 207 - T 14-10-2018 IPR020845 AMP-binding, conserved site DA442_20630 0ad7c66a9badc1987ec3aa7ac1b1b7ff 650 SUPERFAMILY SSF56801 14 610 1.02E-97 T 14-10-2018 DA442_20630 0ad7c66a9badc1987ec3aa7ac1b1b7ff 650 Gene3D G3DSA:3.40.50.12780 328 467 5.5E-33 T 14-10-2018 DA442_20630 0ad7c66a9badc1987ec3aa7ac1b1b7ff 650 Gene3D G3DSA:3.40.50.12780 8 317 2.9E-37 T 14-10-2018 DA442_15005 ab8bbc787746165c47eb5f2e785d2522 221 Gene3D G3DSA:3.40.50.720 1 221 3.9E-53 T 14-10-2018 DA442_15005 ab8bbc787746165c47eb5f2e785d2522 221 Pfam PF00106 short chain dehydrogenase 2 182 8.5E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_15005 ab8bbc787746165c47eb5f2e785d2522 221 SUPERFAMILY SSF51735 2 205 2.8E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_15005 ab8bbc787746165c47eb5f2e785d2522 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 1 17 3.4E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_15005 ab8bbc787746165c47eb5f2e785d2522 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 179 3.4E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_15005 ab8bbc787746165c47eb5f2e785d2522 221 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 160 3.4E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_03980 6030b0a927fd6f520259a189e5324951 230 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 83 204 3.0E-6 T 14-10-2018 IPR009331 Oligogalacturonate-specific porin DA442_03980 6030b0a927fd6f520259a189e5324951 230 Gene3D G3DSA:2.40.160.40 36 230 5.7E-13 T 14-10-2018 DA442_07680 6b0f0702b184edd4a0c9eeae35d28734 421 TIGRFAM TIGR00277 HDIG: HDIG domain 249 339 5.4E-9 T 14-10-2018 IPR006675 HDIG domain DA442_07680 6b0f0702b184edd4a0c9eeae35d28734 421 Gene3D G3DSA:1.10.3210.10 20 194 1.1E-19 T 14-10-2018 DA442_07680 6b0f0702b184edd4a0c9eeae35d28734 421 Gene3D G3DSA:1.10.3210.10 195 410 6.2E-51 T 14-10-2018 DA442_07680 6b0f0702b184edd4a0c9eeae35d28734 421 SMART SM00471 245 380 1.2E-11 T 14-10-2018 IPR003607 HD/PDEase domain DA442_07680 6b0f0702b184edd4a0c9eeae35d28734 421 SMART SM00471 31 160 2.7 T 14-10-2018 IPR003607 HD/PDEase domain DA442_07680 6b0f0702b184edd4a0c9eeae35d28734 421 SUPERFAMILY SSF109604 239 403 2.65E-33 T 14-10-2018 DA442_07680 6b0f0702b184edd4a0c9eeae35d28734 421 SUPERFAMILY SSF109604 26 194 9.63E-17 T 14-10-2018 DA442_07680 6b0f0702b184edd4a0c9eeae35d28734 421 Pfam PF01966 HD domain 37 147 1.3E-5 T 14-10-2018 IPR006674 HD domain DA442_07680 6b0f0702b184edd4a0c9eeae35d28734 421 Pfam PF01966 HD domain 249 370 8.0E-19 T 14-10-2018 IPR006674 HD domain DA442_00515 0ead13c11e7dec5525a7fd55d75083e9 132 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 6.6E-27 T 14-10-2018 DA442_00515 0ead13c11e7dec5525a7fd55d75083e9 132 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 6.6E-27 T 14-10-2018 DA442_00515 0ead13c11e7dec5525a7fd55d75083e9 132 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 6.6E-27 T 14-10-2018 DA442_00515 0ead13c11e7dec5525a7fd55d75083e9 132 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 1.7E-32 T 14-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 DA442_00515 0ead13c11e7dec5525a7fd55d75083e9 132 Pfam PF02416 mttA/Hcf106 family 4 49 1.7E-5 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 DA442_00515 0ead13c11e7dec5525a7fd55d75083e9 132 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 132 18.068 T 14-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 DA442_04815 4590abad3ee17912337893532dd0fbdc 99 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 37 99 2.3E-26 T 14-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain DA442_04815 4590abad3ee17912337893532dd0fbdc 99 Pfam PF12836 Helix-hairpin-helix motif 37 97 1.3E-22 T 14-10-2018 DA442_04815 4590abad3ee17912337893532dd0fbdc 99 SMART SM00278 47 66 5.2 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DA442_04815 4590abad3ee17912337893532dd0fbdc 99 SMART SM00278 77 96 69.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DA442_04815 4590abad3ee17912337893532dd0fbdc 99 Gene3D G3DSA:1.10.150.280 26 99 9.6E-24 T 14-10-2018 DA442_04815 4590abad3ee17912337893532dd0fbdc 99 SUPERFAMILY SSF47781 32 99 8.56E-28 T 14-10-2018 IPR010994 RuvA domain 2-like DA442_15605 6ffdba2debfc527604d0c738c96220dd 172 Pfam PF01202 Shikimate kinase 13 169 1.5E-57 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 DA442_15605 6ffdba2debfc527604d0c738c96220dd 172 PRINTS PR01100 Shikimate kinase family signature 7 22 3.3E-29 T 14-10-2018 DA442_15605 6ffdba2debfc527604d0c738c96220dd 172 PRINTS PR01100 Shikimate kinase family signature 98 115 3.3E-29 T 14-10-2018 DA442_15605 6ffdba2debfc527604d0c738c96220dd 172 PRINTS PR01100 Shikimate kinase family signature 77 86 3.3E-29 T 14-10-2018 DA442_15605 6ffdba2debfc527604d0c738c96220dd 172 PRINTS PR01100 Shikimate kinase family signature 31 44 3.3E-29 T 14-10-2018 DA442_15605 6ffdba2debfc527604d0c738c96220dd 172 PRINTS PR01100 Shikimate kinase family signature 59 67 3.3E-29 T 14-10-2018 DA442_15605 6ffdba2debfc527604d0c738c96220dd 172 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 14-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 DA442_15605 6ffdba2debfc527604d0c738c96220dd 172 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 30.116 T 14-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 DA442_15605 6ffdba2debfc527604d0c738c96220dd 172 Gene3D G3DSA:3.40.50.300 1 172 2.2E-58 T 14-10-2018 DA442_15605 6ffdba2debfc527604d0c738c96220dd 172 SUPERFAMILY SSF52540 4 169 6.92E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_12015 575ced79694a1045c928bb19a71026bf 99 Gene3D G3DSA:1.10.3990.20 8 99 1.5E-32 T 14-10-2018 IPR038268 Ribbon-helix-helix domain superfamily DA442_12015 575ced79694a1045c928bb19a71026bf 99 Pfam PF13467 Ribbon-helix-helix domain 16 82 1.5E-24 T 14-10-2018 IPR027373 Ribbon-helix-helix domain DA442_22420 cc027f2ed2b2a089d673ae742abb0749 240 Pfam PF00881 Nitroreductase family 8 159 9.6E-26 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 DA442_22420 cc027f2ed2b2a089d673ae742abb0749 240 PIRSF PIRSF005426 1 240 2.2E-86 T 14-10-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 DA442_22420 cc027f2ed2b2a089d673ae742abb0749 240 Gene3D G3DSA:3.40.109.10 1 240 1.1E-79 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DA442_22420 cc027f2ed2b2a089d673ae742abb0749 240 SUPERFAMILY SSF55469 1 238 2.22E-76 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DA442_03320 9deb8ea852ca18d644f80cc5ce9ba472 115 SUPERFAMILY SSF54285 6 82 6.54E-26 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp DA442_03320 9deb8ea852ca18d644f80cc5ce9ba472 115 Hamap MF_00460 Protein RnfH [rnfH]. 8 98 24.788 T 14-10-2018 IPR005346 RnfH protein DA442_03320 9deb8ea852ca18d644f80cc5ce9ba472 115 Pfam PF03658 RnfH family Ubiquitin 8 90 5.4E-34 T 14-10-2018 IPR005346 RnfH protein DA442_03320 9deb8ea852ca18d644f80cc5ce9ba472 115 Gene3D G3DSA:3.10.20.280 2 92 2.0E-33 T 14-10-2018 IPR037021 RnfH superfamily DA442_10015 cbe6f76a351beb6eabfbad72637f2bdb 38 Pfam PF11665 Protein of unknown function (DUF3265) 11 38 1.5E-12 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_13280 3a058e8236a24d4b4e67d672c4dc6056 370 Pfam PF14378 PAP2 superfamily 146 354 3.5E-41 T 14-10-2018 IPR026841 Inositolphosphotransferase Aur1/Ipt1 DA442_24595 ea2635d567b1874ef05c6f047aef558c 299 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 141 2.4E-12 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DA442_24595 ea2635d567b1874ef05c6f047aef558c 299 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 185 5.9E-55 T 14-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 DA442_24595 ea2635d567b1874ef05c6f047aef558c 299 SUPERFAMILY SSF64518 1 297 1.7E-52 T 14-10-2018 DA442_22085 2ce2b7a4f9dcb716c45e2a9e72c5a29e 308 SUPERFAMILY SSF103481 182 288 1.22E-6 T 14-10-2018 DA442_22085 2ce2b7a4f9dcb716c45e2a9e72c5a29e 308 SUPERFAMILY SSF103481 42 139 5.1E-12 T 14-10-2018 DA442_22085 2ce2b7a4f9dcb716c45e2a9e72c5a29e 308 Pfam PF00892 EamA-like transporter family 6 136 1.8E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DA442_22085 2ce2b7a4f9dcb716c45e2a9e72c5a29e 308 Pfam PF00892 EamA-like transporter family 150 287 1.5E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DA442_24060 3611546c0ebca7806e89d7e638569c43 401 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 9 386 1.6E-60 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 DA442_24060 3611546c0ebca7806e89d7e638569c43 401 PRINTS PR01036 Tetracycline resistance protein TetB signature 134 158 1.6E-5 T 14-10-2018 DA442_24060 3611546c0ebca7806e89d7e638569c43 401 PRINTS PR01036 Tetracycline resistance protein TetB signature 73 95 1.6E-5 T 14-10-2018 DA442_24060 3611546c0ebca7806e89d7e638569c43 401 PRINTS PR01036 Tetracycline resistance protein TetB signature 280 304 1.6E-5 T 14-10-2018 DA442_24060 3611546c0ebca7806e89d7e638569c43 401 SUPERFAMILY SSF103473 9 389 3.27E-57 T 14-10-2018 IPR036259 MFS transporter superfamily DA442_24060 3611546c0ebca7806e89d7e638569c43 401 Gene3D G3DSA:1.20.1720.10 10 387 5.2E-97 T 14-10-2018 DA442_24060 3611546c0ebca7806e89d7e638569c43 401 Pfam PF07690 Major Facilitator Superfamily 15 354 3.4E-44 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DA442_09805 5ab935c3fd69334975ba6f54febf822b 173 SUPERFAMILY SSF55729 10 134 4.01E-16 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_09805 5ab935c3fd69334975ba6f54febf822b 173 Pfam PF13527 Acetyltransferase (GNAT) domain 20 123 1.2E-8 T 14-10-2018 DA442_09805 5ab935c3fd69334975ba6f54febf822b 173 Gene3D G3DSA:3.40.630.30 1 161 3.0E-20 T 14-10-2018 DA442_22895 0d75b528638a33feeb09fa50738dcac8 361 Pfam PF13682 Chemoreceptor zinc-binding domain 258 321 6.0E-15 T 14-10-2018 IPR025991 Chemoreceptor zinc-binding domain DA442_22895 0d75b528638a33feeb09fa50738dcac8 361 SUPERFAMILY SSF58104 22 243 1.15E-43 T 14-10-2018 DA442_22895 0d75b528638a33feeb09fa50738dcac8 361 SMART SM00283 41 282 1.4E-19 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_22895 0d75b528638a33feeb09fa50738dcac8 361 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 113 239 9.4E-30 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_22895 0d75b528638a33feeb09fa50738dcac8 361 Gene3D G3DSA:1.10.287.950 3 254 1.4E-44 T 14-10-2018 DA442_22310 59afb81c184c4a8af8717e57f1c845a9 547 Pfam PF02321 Outer membrane efflux protein 311 490 2.8E-22 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DA442_22310 59afb81c184c4a8af8717e57f1c845a9 547 Pfam PF02321 Outer membrane efflux protein 69 251 9.4E-25 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DA442_22310 59afb81c184c4a8af8717e57f1c845a9 547 SUPERFAMILY SSF56954 2 494 1.57E-94 T 14-10-2018 DA442_22310 59afb81c184c4a8af8717e57f1c845a9 547 Gene3D G3DSA:2.20.200.10 106 381 1.9E-110 T 14-10-2018 DA442_22310 59afb81c184c4a8af8717e57f1c845a9 547 Gene3D G3DSA:1.20.1600.10 59 493 1.9E-110 T 14-10-2018 DA442_15570 172c44b6db02fe4c0a08641ec7d7996e 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 73 9.0E-24 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_15570 172c44b6db02fe4c0a08641ec7d7996e 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 14-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_15570 172c44b6db02fe4c0a08641ec7d7996e 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 73 6.2E-38 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_15570 172c44b6db02fe4c0a08641ec7d7996e 75 Pfam PF01084 Ribosomal protein S18 19 68 2.8E-25 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_15570 172c44b6db02fe4c0a08641ec7d7996e 75 Gene3D G3DSA:4.10.640.10 20 75 7.8E-29 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_15570 172c44b6db02fe4c0a08641ec7d7996e 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.42 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_15570 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.6E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_15570 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.6E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_15570 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.6E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_15570 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.6E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_15570 172c44b6db02fe4c0a08641ec7d7996e 75 SUPERFAMILY SSF46911 3 74 2.49E-29 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01105 db4fd6e55603f728bc21a96c4dc1b139 211 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 3 201 1.2E-57 T 14-10-2018 IPR020019 Sialic acid O-acyltransferase NeuD-like DA442_01105 db4fd6e55603f728bc21a96c4dc1b139 211 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 158 191 4.5E-4 T 14-10-2018 IPR001451 Hexapeptide repeat DA442_01105 db4fd6e55603f728bc21a96c4dc1b139 211 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 121 155 1.5E-6 T 14-10-2018 IPR001451 Hexapeptide repeat DA442_01105 db4fd6e55603f728bc21a96c4dc1b139 211 Gene3D G3DSA:3.40.50.20 1 85 3.3E-12 T 14-10-2018 DA442_01105 db4fd6e55603f728bc21a96c4dc1b139 211 SUPERFAMILY SSF51161 2 206 2.08E-35 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily DA442_01105 db4fd6e55603f728bc21a96c4dc1b139 211 Gene3D G3DSA:2.160.10.10 86 210 8.7E-24 T 14-10-2018 DA442_15235 410546132582023ca2e5b45e43287831 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 1.2E-65 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 DA442_15235 410546132582023ca2e5b45e43287831 481 PIRSF PIRSF004919 14 481 3.5E-143 T 14-10-2018 IPR025502 TldD DA442_15235 410546132582023ca2e5b45e43287831 481 Gene3D G3DSA:3.30.2290.10 7 240 9.6E-17 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal DA442_15235 410546132582023ca2e5b45e43287831 481 SUPERFAMILY SSF111283 18 480 1.31E-128 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 DA442_14590 5fbf4cd7710cc7f5b8945417e03a83f8 540 Gene3D G3DSA:3.50.50.60 10 404 3.4E-154 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_14590 5fbf4cd7710cc7f5b8945417e03a83f8 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 7.8E-9 T 14-10-2018 DA442_14590 5fbf4cd7710cc7f5b8945417e03a83f8 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 7.8E-9 T 14-10-2018 DA442_14590 5fbf4cd7710cc7f5b8945417e03a83f8 540 SUPERFAMILY SSF46977 425 525 2.88E-32 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DA442_14590 5fbf4cd7710cc7f5b8945417e03a83f8 540 Gene3D G3DSA:1.20.58.100 425 540 4.4E-45 T 14-10-2018 DA442_14590 5fbf4cd7710cc7f5b8945417e03a83f8 540 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 522 1.4E-14 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DA442_14590 5fbf4cd7710cc7f5b8945417e03a83f8 540 SUPERFAMILY SSF51905 5 447 9.86E-76 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_14590 5fbf4cd7710cc7f5b8945417e03a83f8 540 SUPERFAMILY SSF56425 238 353 3.59E-42 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DA442_14590 5fbf4cd7710cc7f5b8945417e03a83f8 540 PIRSF PIRSF000171 336 538 6.4E-14 T 14-10-2018 DA442_14590 5fbf4cd7710cc7f5b8945417e03a83f8 540 PIRSF PIRSF000171 1 261 3.2E-29 T 14-10-2018 DA442_14590 5fbf4cd7710cc7f5b8945417e03a83f8 540 Gene3D G3DSA:3.90.700.10 248 358 3.4E-154 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DA442_14590 5fbf4cd7710cc7f5b8945417e03a83f8 540 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 7 520 2.8E-210 T 14-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 DA442_14590 5fbf4cd7710cc7f5b8945417e03a83f8 540 Pfam PF00890 FAD binding domain 10 392 2.5E-101 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 DA442_12510 ca318126169b7d58b8fb1ff2d120471a 300 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 293 4.4E-83 T 14-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 DA442_12510 ca318126169b7d58b8fb1ff2d120471a 300 Pfam PF04261 Dyp-type peroxidase family 5 293 4.4E-88 T 14-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 DA442_12510 ca318126169b7d58b8fb1ff2d120471a 300 SUPERFAMILY SSF54909 1 297 3.93E-93 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel DA442_09060 0cd21e6f2b66e8509138f32d39608d5a 649 SUPERFAMILY SSF53649 283 595 4.71E-70 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DA442_09060 0cd21e6f2b66e8509138f32d39608d5a 649 Gene3D G3DSA:3.40.720.10 276 572 6.2E-209 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DA442_09060 0cd21e6f2b66e8509138f32d39608d5a 649 Gene3D G3DSA:3.30.1120.80 248 644 6.2E-209 T 14-10-2018 DA442_09060 0cd21e6f2b66e8509138f32d39608d5a 649 PIRSF PIRSF005091 13 648 5.3E-100 T 14-10-2018 IPR012160 Lipoteichoic acid synthase-like DA442_09060 0cd21e6f2b66e8509138f32d39608d5a 649 Pfam PF00884 Sulfatase 285 555 5.7E-51 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 DA442_00400 22f8adc194bd03375935d0eeae30559c 141 SUPERFAMILY SSF52402 3 139 6.2E-34 T 14-10-2018 DA442_00400 22f8adc194bd03375935d0eeae30559c 141 PIRSF PIRSF006276 1 141 2.6E-53 T 14-10-2018 IPR006015 Universal stress protein A DA442_00400 22f8adc194bd03375935d0eeae30559c 141 Gene3D G3DSA:3.40.50.620 2 141 3.6E-49 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DA442_00400 22f8adc194bd03375935d0eeae30559c 141 Pfam PF00582 Universal stress protein family 3 138 6.5E-22 T 14-10-2018 IPR006016 UspA DA442_21165 b9dbd8dfa96a8144c32b883111522430 252 SMART SM00530 10 65 2.6E-4 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DA442_21165 b9dbd8dfa96a8144c32b883111522430 252 Gene3D G3DSA:1.10.260.40 3 70 7.9E-6 T 14-10-2018 DA442_21165 b9dbd8dfa96a8144c32b883111522430 252 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 11 68 1.2E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DA442_21165 b9dbd8dfa96a8144c32b883111522430 252 SUPERFAMILY SSF47413 5 68 3.84E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DA442_09030 1c3a05ea430414f092472cb59eeabc52 519 Pfam PF00501 AMP-binding enzyme 10 391 3.3E-59 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DA442_09030 1c3a05ea430414f092472cb59eeabc52 519 Gene3D G3DSA:3.40.50.12780 4 384 2.0E-68 T 14-10-2018 DA442_09030 1c3a05ea430414f092472cb59eeabc52 519 ProSitePatterns PS00455 Putative AMP-binding domain signature. 156 167 - T 14-10-2018 IPR020845 AMP-binding, conserved site DA442_09030 1c3a05ea430414f092472cb59eeabc52 519 SUPERFAMILY SSF56801 2 486 1.44E-85 T 14-10-2018 DA442_02360 53bdb271ad4b661972b10e636b32399f 398 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 339 363 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DA442_02360 53bdb271ad4b661972b10e636b32399f 398 Pfam PF01098 Cell cycle protein 26 381 1.3E-113 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DA442_02360 53bdb271ad4b661972b10e636b32399f 398 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 24 380 7.4E-129 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DA442_02360 53bdb271ad4b661972b10e636b32399f 398 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 22 390 41.489 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DA442_20895 ed5dddd9b6824d4ecb573ac45538d7fd 44 TIGRFAM TIGR02808 short_TIGR02808: TIGR02808 family protein 1 42 3.3E-26 T 14-10-2018 IPR014175 Conserved hypothetical protein CHP02808 DA442_20895 ed5dddd9b6824d4ecb573ac45538d7fd 44 Pfam PF09574 Protein of unknown function (Duf2374) 1 42 1.5E-26 T 14-10-2018 IPR014175 Conserved hypothetical protein CHP02808 DA442_16125 7fa0611dbdedd6c8533eec8efbe97614 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 7.3E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DA442_16125 7fa0611dbdedd6c8533eec8efbe97614 211 Pfam PF13972 Bacterial transcriptional repressor 57 199 3.2E-44 T 14-10-2018 IPR025722 Bacterial transcriptional repressor TetR DA442_16125 7fa0611dbdedd6c8533eec8efbe97614 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 4.1E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DA442_16125 7fa0611dbdedd6c8533eec8efbe97614 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 4.1E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DA442_16125 7fa0611dbdedd6c8533eec8efbe97614 211 Gene3D G3DSA:1.10.357.10 1 210 9.2E-65 T 14-10-2018 DA442_16125 7fa0611dbdedd6c8533eec8efbe97614 211 SUPERFAMILY SSF46689 2 71 1.31E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_08870 004d097cff201f3fb801aa86ff064fdf 142 SUPERFAMILY SSF69635 3 128 2.43E-51 T 14-10-2018 DA442_08870 004d097cff201f3fb801aa86ff064fdf 142 TIGRFAM TIGR02513 type_III_yscB: type III secretion system chaperone, YscB family 3 142 9.5E-63 T 14-10-2018 IPR013353 Type III secretion system chaperone YscB DA442_08870 004d097cff201f3fb801aa86ff064fdf 142 Gene3D G3DSA:3.30.1460.10 2 128 7.0E-27 T 14-10-2018 DA442_08870 004d097cff201f3fb801aa86ff064fdf 142 Pfam PF05932 Tir chaperone protein (CesT) family 4 122 4.5E-27 T 14-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 DA442_22805 163ac2f9dbca64b1bd36a70b8d05fdd8 279 Gene3D G3DSA:1.10.10.2730 235 277 2.3E-14 T 14-10-2018 DA442_22805 163ac2f9dbca64b1bd36a70b8d05fdd8 279 SUPERFAMILY SSF46689 229 277 4.44E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_22805 163ac2f9dbca64b1bd36a70b8d05fdd8 279 SUPERFAMILY SSF51215 6 162 5.62E-28 T 14-10-2018 IPR037923 Transcription regulator HTH-like DA442_22805 163ac2f9dbca64b1bd36a70b8d05fdd8 279 SMART SM00342 192 275 1.0E-29 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_22805 163ac2f9dbca64b1bd36a70b8d05fdd8 279 Pfam PF12833 Helix-turn-helix domain 199 276 3.1E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_22805 163ac2f9dbca64b1bd36a70b8d05fdd8 279 Pfam PF02311 AraC-like ligand binding domain 38 136 7.9E-17 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 DA442_22805 163ac2f9dbca64b1bd36a70b8d05fdd8 279 Gene3D G3DSA:1.10.10.60 175 234 2.0E-11 T 14-10-2018 DA442_22805 163ac2f9dbca64b1bd36a70b8d05fdd8 279 Gene3D G3DSA:2.60.120.280 5 167 2.0E-56 T 14-10-2018 DA442_22805 163ac2f9dbca64b1bd36a70b8d05fdd8 279 SUPERFAMILY SSF46689 175 225 1.79E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_25670 64de8c5d1fb34b06bd6d41f80f58a856 113 Pfam PF01022 Bacterial regulatory protein, arsR family 35 84 6.8E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DA442_25670 64de8c5d1fb34b06bd6d41f80f58a856 113 Gene3D G3DSA:1.10.10.10 9 111 7.9E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_25670 64de8c5d1fb34b06bd6d41f80f58a856 113 SMART SM00418 28 110 1.6E-10 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DA442_25670 64de8c5d1fb34b06bd6d41f80f58a856 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 30 45 8.4E-8 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DA442_25670 64de8c5d1fb34b06bd6d41f80f58a856 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 66 81 8.4E-8 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DA442_25670 64de8c5d1fb34b06bd6d41f80f58a856 113 SUPERFAMILY SSF46785 19 110 1.28E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_08215 d6e727f4e859118612db7b0290bb805e 278 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 138 273 9.6E-18 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 DA442_08215 d6e727f4e859118612db7b0290bb805e 278 Gene3D G3DSA:1.10.530.10 132 275 3.1E-15 T 14-10-2018 DA442_06390 f8399cddc3f77fe1caff2f3863a052aa 646 SUPERFAMILY SSF52172 3 130 4.66E-6 T 14-10-2018 IPR011006 CheY-like superfamily DA442_06390 f8399cddc3f77fe1caff2f3863a052aa 646 Gene3D G3DSA:3.30.565.10 488 645 1.4E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_06390 f8399cddc3f77fe1caff2f3863a052aa 646 SUPERFAMILY SSF47384 335 373 1.24E-6 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DA442_06390 f8399cddc3f77fe1caff2f3863a052aa 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 569 583 1.1E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_06390 f8399cddc3f77fe1caff2f3863a052aa 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 625 638 1.1E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_06390 f8399cddc3f77fe1caff2f3863a052aa 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 601 619 1.1E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_06390 f8399cddc3f77fe1caff2f3863a052aa 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 587 597 1.1E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DA442_06390 f8399cddc3f77fe1caff2f3863a052aa 646 Gene3D G3DSA:2.60.120.10 175 318 1.8E-18 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DA442_06390 f8399cddc3f77fe1caff2f3863a052aa 646 Gene3D G3DSA:3.40.50.2300 2 140 2.6E-7 T 14-10-2018 DA442_06390 f8399cddc3f77fe1caff2f3863a052aa 646 SUPERFAMILY SSF55874 480 639 2.49E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_06390 f8399cddc3f77fe1caff2f3863a052aa 646 SMART SM00387 528 641 7.6E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_06390 f8399cddc3f77fe1caff2f3863a052aa 646 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 530 638 9.1E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_06390 f8399cddc3f77fe1caff2f3863a052aa 646 Pfam PF00027 Cyclic nucleotide-binding domain 202 289 1.8E-16 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain DA442_06390 f8399cddc3f77fe1caff2f3863a052aa 646 Pfam PF00512 His Kinase A (phospho-acceptor) domain 340 368 9.9E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DA442_06390 f8399cddc3f77fe1caff2f3863a052aa 646 SUPERFAMILY SSF51206 201 311 1.31E-20 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like DA442_06390 f8399cddc3f77fe1caff2f3863a052aa 646 SMART SM00100 176 301 0.0017 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain DA442_22585 69214cdb230d12f62c8110fb1b2be657 436 Gene3D G3DSA:1.20.1740.10 1 435 4.5E-62 T 14-10-2018 DA442_22585 69214cdb230d12f62c8110fb1b2be657 436 Pfam PF13520 Amino acid permease 9 414 2.1E-46 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DA442_22585 69214cdb230d12f62c8110fb1b2be657 436 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 1 430 7.9E-126 T 14-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 DA442_22585 69214cdb230d12f62c8110fb1b2be657 436 TIGRFAM TIGR04299 antiport_PotE: putrescine-ornithine antiporter 4 431 5.1E-202 T 14-10-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 DA442_22585 69214cdb230d12f62c8110fb1b2be657 436 Hamap MF_02073 Putrescine transporter PotE [potE]. 8 435 34.557 T 14-10-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 DA442_22585 69214cdb230d12f62c8110fb1b2be657 436 PIRSF PIRSF006060 1 432 4.2E-52 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DA442_24010 4da6d1fbe559876120ba6443934e2369 179 PIRSF PIRSF014995 8 179 4.3E-71 T 14-10-2018 IPR014469 Protein of unknown function DUF2271 DA442_24010 4da6d1fbe559876120ba6443934e2369 179 Gene3D G3DSA:2.60.40.4070 94 149 5.3E-9 T 14-10-2018 DA442_24010 4da6d1fbe559876120ba6443934e2369 179 Pfam PF10029 Predicted periplasmic protein (DUF2271) 39 169 2.5E-46 T 14-10-2018 IPR014469 Protein of unknown function DUF2271 DA442_25505 baf45ca339165a1b0f916ccae1c23fd2 199 Gene3D G3DSA:3.40.50.360 1 175 1.6E-49 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DA442_25505 baf45ca339165a1b0f916ccae1c23fd2 199 Pfam PF02525 Flavodoxin-like fold 1 167 1.3E-42 T 14-10-2018 IPR003680 Flavodoxin-like fold DA442_25505 baf45ca339165a1b0f916ccae1c23fd2 199 SUPERFAMILY SSF52218 1 174 2.51E-47 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DA442_18690 dd47ba844ec264c917adc5ce9be417e8 524 Gene3D G3DSA:3.30.565.10 368 520 5.7E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_18690 dd47ba844ec264c917adc5ce9be417e8 524 Gene3D G3DSA:3.30.450.20 32 164 1.1E-33 T 14-10-2018 DA442_18690 dd47ba844ec264c917adc5ce9be417e8 524 SUPERFAMILY SSF103190 38 166 6.28E-30 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily DA442_18690 dd47ba844ec264c917adc5ce9be417e8 524 Pfam PF14501 GHKL domain 417 518 4.6E-12 T 14-10-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain DA442_18690 dd47ba844ec264c917adc5ce9be417e8 524 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 317 368 4.9E-10 T 14-10-2018 IPR039506 SpoOB, alpha-helical domain DA442_18690 dd47ba844ec264c917adc5ce9be417e8 524 Gene3D G3DSA:3.30.450.20 200 309 5.3E-10 T 14-10-2018 DA442_18690 dd47ba844ec264c917adc5ce9be417e8 524 SMART SM00387 415 523 3.9E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DA442_18690 dd47ba844ec264c917adc5ce9be417e8 524 Pfam PF17203 Single cache domain 3 41 163 2.9E-19 T 14-10-2018 IPR033463 Single cache domain 3 DA442_18690 dd47ba844ec264c917adc5ce9be417e8 524 SUPERFAMILY SSF55874 381 520 7.53E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DA442_09515 6f82df1f157a268f8d08b0744ad1324b 246 Gene3D G3DSA:3.40.1350.10 117 236 7.2E-20 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 DA442_09515 6f82df1f157a268f8d08b0744ad1324b 246 Pfam PF01939 Endonuclease NucS 118 222 4.7E-13 T 14-10-2018 IPR002793 Endonuclease NucS GO:0004519 DA442_17940 f52c8720723fe67124cd7e986495d849 292 SUPERFAMILY SSF103481 41 143 1.96E-10 T 14-10-2018 DA442_17940 f52c8720723fe67124cd7e986495d849 292 Pfam PF00892 EamA-like transporter family 10 138 3.8E-12 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DA442_17940 f52c8720723fe67124cd7e986495d849 292 Pfam PF00892 EamA-like transporter family 150 279 2.5E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DA442_17940 f52c8720723fe67124cd7e986495d849 292 SUPERFAMILY SSF103481 188 285 5.62E-16 T 14-10-2018 DA442_11900 beded363512931529777b905dc94eef2 75 Gene3D G3DSA:1.10.3390.10 1 75 2.3E-32 T 14-10-2018 IPR023202 YejL-like superfamily DA442_11900 beded363512931529777b905dc94eef2 75 PIRSF PIRSF006188 1 72 9.2E-37 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 DA442_11900 beded363512931529777b905dc94eef2 75 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 7.0E-33 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 DA442_11900 beded363512931529777b905dc94eef2 75 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 6.5E-19 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 DA442_11900 beded363512931529777b905dc94eef2 75 SUPERFAMILY SSF158651 1 75 7.59E-29 T 14-10-2018 IPR023202 YejL-like superfamily DA442_11900 beded363512931529777b905dc94eef2 75 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 23.22 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 DA442_25730 115c56bf4d051a3a54d9ee1df7abeaaa 385 PRINTS PR00166 Aromatic amino acid permease signature 306 324 1.1E-35 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DA442_25730 115c56bf4d051a3a54d9ee1df7abeaaa 385 PRINTS PR00166 Aromatic amino acid permease signature 82 102 1.1E-35 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DA442_25730 115c56bf4d051a3a54d9ee1df7abeaaa 385 PRINTS PR00166 Aromatic amino acid permease signature 37 56 1.1E-35 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DA442_25730 115c56bf4d051a3a54d9ee1df7abeaaa 385 PRINTS PR00166 Aromatic amino acid permease signature 182 204 1.1E-35 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DA442_25730 115c56bf4d051a3a54d9ee1df7abeaaa 385 PRINTS PR00166 Aromatic amino acid permease signature 10 33 1.1E-35 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DA442_25730 115c56bf4d051a3a54d9ee1df7abeaaa 385 PRINTS PR00166 Aromatic amino acid permease signature 327 346 1.1E-35 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DA442_25730 115c56bf4d051a3a54d9ee1df7abeaaa 385 PRINTS PR00166 Aromatic amino acid permease signature 147 167 1.1E-35 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DA442_25730 115c56bf4d051a3a54d9ee1df7abeaaa 385 Pfam PF03222 Tryptophan/tyrosine permease family 4 381 2.6E-76 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 DA442_12070 a5bf9a3709ab779fb667e4cdaa80ef32 232 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 222 1.8E-59 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DA442_12070 a5bf9a3709ab779fb667e4cdaa80ef32 232 PRINTS PR00783 Major intrinsic protein family signature 2 21 3.8E-51 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DA442_12070 a5bf9a3709ab779fb667e4cdaa80ef32 232 PRINTS PR00783 Major intrinsic protein family signature 42 66 3.8E-51 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DA442_12070 a5bf9a3709ab779fb667e4cdaa80ef32 232 PRINTS PR00783 Major intrinsic protein family signature 136 154 3.8E-51 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DA442_12070 a5bf9a3709ab779fb667e4cdaa80ef32 232 PRINTS PR00783 Major intrinsic protein family signature 79 98 3.8E-51 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DA442_12070 a5bf9a3709ab779fb667e4cdaa80ef32 232 PRINTS PR00783 Major intrinsic protein family signature 166 188 3.8E-51 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DA442_12070 a5bf9a3709ab779fb667e4cdaa80ef32 232 PRINTS PR00783 Major intrinsic protein family signature 205 225 3.8E-51 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DA442_12070 a5bf9a3709ab779fb667e4cdaa80ef32 232 ProSitePatterns PS00221 MIP family signature. 60 68 - T 14-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 DA442_12070 a5bf9a3709ab779fb667e4cdaa80ef32 232 SUPERFAMILY SSF81338 2 227 3.79E-68 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 DA442_12070 a5bf9a3709ab779fb667e4cdaa80ef32 232 Hamap MF_01146 Aquaporin Z [aqpZ]. 1 229 35.001 T 14-10-2018 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 DA442_12070 a5bf9a3709ab779fb667e4cdaa80ef32 232 Pfam PF00230 Major intrinsic protein 2 222 2.2E-48 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DA442_12070 a5bf9a3709ab779fb667e4cdaa80ef32 232 Gene3D G3DSA:1.20.1080.10 1 229 5.5E-85 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 DA442_10815 8a3e80f2f7f9d2280b372e1af9024a04 429 Gene3D G3DSA:1.20.1420.20 23 411 6.2E-86 T 14-10-2018 IPR038352 Imelysin-like domain superfamily DA442_10815 8a3e80f2f7f9d2280b372e1af9024a04 429 Pfam PF09375 Imelysin 49 406 5.4E-98 T 14-10-2018 IPR018976 Imelysin-like domain DA442_21900 1134fa4bc69b8474049e651b11cf9bc8 542 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 345 508 8.5E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_21900 1134fa4bc69b8474049e651b11cf9bc8 542 SUPERFAMILY SSF58104 233 542 1.57E-71 T 14-10-2018 DA442_21900 1134fa4bc69b8474049e651b11cf9bc8 542 Gene3D G3DSA:1.10.287.950 213 542 3.8E-72 T 14-10-2018 DA442_21900 1134fa4bc69b8474049e651b11cf9bc8 542 SMART SM00283 280 541 2.8E-67 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_21900 1134fa4bc69b8474049e651b11cf9bc8 542 SMART SM00304 213 265 3.6E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_21900 1134fa4bc69b8474049e651b11cf9bc8 542 Pfam PF00672 HAMP domain 215 260 2.2E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_03135 9169a1952f56aa9b6b339c03436ccdf9 141 Pfam PF00334 Nucleoside diphosphate kinase 4 138 7.1E-59 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DA442_03135 9169a1952f56aa9b6b339c03436ccdf9 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 3.0E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DA442_03135 9169a1952f56aa9b6b339c03436ccdf9 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 3.0E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DA442_03135 9169a1952f56aa9b6b339c03436ccdf9 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 3.0E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DA442_03135 9169a1952f56aa9b6b339c03436ccdf9 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 3.0E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DA442_03135 9169a1952f56aa9b6b339c03436ccdf9 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 3.0E-38 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DA442_03135 9169a1952f56aa9b6b339c03436ccdf9 141 SMART SM00562 3 140 5.3E-91 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DA442_03135 9169a1952f56aa9b6b339c03436ccdf9 141 SUPERFAMILY SSF54919 1 140 2.62E-61 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DA442_03135 9169a1952f56aa9b6b339c03436ccdf9 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 36.359 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DA442_03135 9169a1952f56aa9b6b339c03436ccdf9 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 14-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DA442_03135 9169a1952f56aa9b6b339c03436ccdf9 141 Gene3D G3DSA:3.30.70.141 1 141 4.8E-60 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DA442_08855 dc9a67594531919f8688963a90a52c63 69 TIGRFAM TIGR02501 type_III_yscE: type III secretion system protein, YseE family 1 63 1.8E-10 T 14-10-2018 IPR012671 Type III secretion system, secretion protein E GO:0009405 DA442_08855 dc9a67594531919f8688963a90a52c63 69 Gene3D G3DSA:1.20.5.420 1 66 8.7E-8 T 14-10-2018 DA442_08855 dc9a67594531919f8688963a90a52c63 69 Pfam PF08988 Type III secretion system, cytoplasmic E component of needle 1 62 1.3E-10 T 14-10-2018 IPR012671 Type III secretion system, secretion protein E GO:0009405 DA442_13880 b089093ee1dd8ac912ad623eda7dd280 89 SMART SM01387 8 88 7.7E-53 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_13880 b089093ee1dd8ac912ad623eda7dd280 89 Gene3D G3DSA:1.10.287.10 2 89 1.8E-35 T 14-10-2018 DA442_13880 b089093ee1dd8ac912ad623eda7dd280 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.754 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_13880 b089093ee1dd8ac912ad623eda7dd280 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 4.2E-39 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_13880 b089093ee1dd8ac912ad623eda7dd280 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_13880 b089093ee1dd8ac912ad623eda7dd280 89 SUPERFAMILY SSF47060 3 89 6.47E-35 T 14-10-2018 IPR009068 S15/NS1, RNA-binding DA442_13880 b089093ee1dd8ac912ad623eda7dd280 89 Pfam PF00312 Ribosomal protein S15 8 88 1.1E-36 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_13880 b089093ee1dd8ac912ad623eda7dd280 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 1.0E-30 T 14-10-2018 DA442_23935 205274115d3c6aa6279feda5b063df6a 132 Pfam PF10928 Protein of unknown function (DUF2810) 79 130 8.2E-31 T 14-10-2018 IPR021230 Protein of unknown function DUF2810 DA442_23935 205274115d3c6aa6279feda5b063df6a 132 Gene3D G3DSA:3.30.1370.150 73 132 4.3E-30 T 14-10-2018 DA442_20150 a4a0c549054fa1bbca59ff2ae357a8d9 309 Gene3D G3DSA:3.40.50.1820 69 306 1.7E-59 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_20150 a4a0c549054fa1bbca59ff2ae357a8d9 309 Pfam PF01738 Dienelactone hydrolase family 96 305 1.3E-45 T 14-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 DA442_20150 a4a0c549054fa1bbca59ff2ae357a8d9 309 SUPERFAMILY SSF53474 82 306 5.0E-42 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_05075 a8d7ebc142c1b306dc59350483813657 293 SUPERFAMILY SSF56112 25 273 7.14E-42 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily DA442_05075 a8d7ebc142c1b306dc59350483813657 293 Gene3D G3DSA:3.90.1200.10 103 283 1.2E-15 T 14-10-2018 DA442_05075 a8d7ebc142c1b306dc59350483813657 293 TIGRFAM TIGR02721 ycfN_thiK: thiamine kinase 30 284 1.8E-106 T 14-10-2018 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896 DA442_05075 a8d7ebc142c1b306dc59350483813657 293 Pfam PF01633 Choline/ethanolamine kinase 66 215 5.1E-12 T 14-10-2018 DA442_07325 888765110bf03370ddd44b5f3b0dc848 312 Pfam PF02470 MlaD protein 28 126 2.1E-14 T 14-10-2018 IPR003399 Mce/MlaD DA442_23980 971d6192001d38e43e3a73c30d98efaf 455 PIRSF PIRSF037714 1 449 1.6E-154 T 14-10-2018 IPR017270 Putative MotA/TolQ/ExbB family protein DA442_23980 971d6192001d38e43e3a73c30d98efaf 455 Pfam PF01618 MotA/TolQ/ExbB proton channel family 306 425 2.3E-30 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel DA442_16525 614920a95c3bed3315f8ddaa978eaa81 195 Gene3D G3DSA:1.20.1590.10 2 195 8.4E-67 T 14-10-2018 IPR023381 YP001051499.1-like domain superfamily DA442_16525 614920a95c3bed3315f8ddaa978eaa81 195 Pfam PF04222 Protein of unknown function (DUF416) 6 193 2.4E-78 T 14-10-2018 IPR007338 Protein of unknown function DUF416 DA442_09275 3999ccdf3be2d41769033cc90a230f13 462 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 266 281 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 DA442_09275 3999ccdf3be2d41769033cc90a230f13 462 Pfam PF00120 Glutamine synthetase, catalytic domain 132 457 7.6E-85 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DA442_09275 3999ccdf3be2d41769033cc90a230f13 462 Gene3D G3DSA:3.30.590.10 132 461 3.8E-84 T 14-10-2018 DA442_09275 3999ccdf3be2d41769033cc90a230f13 462 SUPERFAMILY SSF55931 131 459 1.31E-86 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 DA442_09275 3999ccdf3be2d41769033cc90a230f13 462 SUPERFAMILY SSF54368 31 123 4.58E-7 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DA442_09275 3999ccdf3be2d41769033cc90a230f13 462 SMART SM01230 128 385 1.2E-81 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DA442_22855 79fbe159cd5de507422da12b79a1e129 139 Gene3D G3DSA:3.10.180.10 2 133 8.5E-20 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DA442_22855 79fbe159cd5de507422da12b79a1e129 139 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 104 1.1E-9 T 14-10-2018 DA442_22855 79fbe159cd5de507422da12b79a1e129 139 SUPERFAMILY SSF54593 3 130 4.3E-24 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DA442_17975 071b1e64f5e00d5dac644a0cde595714 408 PIRSF PIRSF000429 1 407 2.3E-108 T 14-10-2018 IPR002155 Thiolase GO:0016747 DA442_17975 071b1e64f5e00d5dac644a0cde595714 408 SUPERFAMILY SSF53901 4 271 1.15E-76 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DA442_17975 071b1e64f5e00d5dac644a0cde595714 408 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 88 106 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 DA442_17975 071b1e64f5e00d5dac644a0cde595714 408 Gene3D G3DSA:3.40.47.10 7 278 3.4E-135 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DA442_17975 071b1e64f5e00d5dac644a0cde595714 408 Pfam PF00108 Thiolase, N-terminal domain 6 265 1.2E-82 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 DA442_17975 071b1e64f5e00d5dac644a0cde595714 408 SUPERFAMILY SSF53901 273 405 2.14E-34 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DA442_17975 071b1e64f5e00d5dac644a0cde595714 408 Gene3D G3DSA:3.40.47.10 130 402 3.4E-135 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DA442_17975 071b1e64f5e00d5dac644a0cde595714 408 ProSitePatterns PS00099 Thiolases active site. 388 401 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 DA442_17975 071b1e64f5e00d5dac644a0cde595714 408 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 404 5.0E-124 T 14-10-2018 IPR002155 Thiolase GO:0016747 DA442_17975 071b1e64f5e00d5dac644a0cde595714 408 Pfam PF02803 Thiolase, C-terminal domain 273 405 2.2E-36 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 DA442_04390 f7e0c036f5e5473e20e9e92af94cec15 255 PRINTS PR00412 Epoxide hydrolase signature 82 95 9.5E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 DA442_04390 f7e0c036f5e5473e20e9e92af94cec15 255 PRINTS PR00412 Epoxide hydrolase signature 230 252 9.5E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 DA442_04390 f7e0c036f5e5473e20e9e92af94cec15 255 PRINTS PR00412 Epoxide hydrolase signature 39 54 9.5E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 DA442_04390 f7e0c036f5e5473e20e9e92af94cec15 255 PRINTS PR00412 Epoxide hydrolase signature 96 109 9.5E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 DA442_04390 f7e0c036f5e5473e20e9e92af94cec15 255 SUPERFAMILY SSF53474 5 253 4.59E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_04390 f7e0c036f5e5473e20e9e92af94cec15 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 39 54 1.6E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DA442_04390 f7e0c036f5e5473e20e9e92af94cec15 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 82 95 1.6E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DA442_04390 f7e0c036f5e5473e20e9e92af94cec15 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 200 214 1.6E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DA442_04390 f7e0c036f5e5473e20e9e92af94cec15 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 96 109 1.6E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DA442_04390 f7e0c036f5e5473e20e9e92af94cec15 255 Pfam PF12697 Alpha/beta hydrolase family 16 247 5.1E-24 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DA442_04390 f7e0c036f5e5473e20e9e92af94cec15 255 Gene3D G3DSA:3.40.50.1820 3 254 2.2E-66 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_04170 5cef2448e92803417a3f4397cd74a868 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DA442_04170 5cef2448e92803417a3f4397cd74a868 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 2.8E-50 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DA442_04170 5cef2448e92803417a3f4397cd74a868 169 SUPERFAMILY SSF51261 18 166 3.31E-55 T 14-10-2018 IPR011055 Duplicated hybrid motif DA442_04170 5cef2448e92803417a3f4397cd74a868 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 3.1E-49 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DA442_04170 5cef2448e92803417a3f4397cd74a868 169 Gene3D G3DSA:2.70.70.10 9 169 6.2E-62 T 14-10-2018 IPR011055 Duplicated hybrid motif DA442_17535 8c0d864080b5f0d7a07276d3ba43187c 108 SUPERFAMILY SSF47413 6 74 4.5E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DA442_17535 8c0d864080b5f0d7a07276d3ba43187c 108 Gene3D G3DSA:1.10.260.40 7 104 1.4E-23 T 14-10-2018 DA442_17535 8c0d864080b5f0d7a07276d3ba43187c 108 Pfam PF12844 Helix-turn-helix domain 9 72 3.2E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DA442_17535 8c0d864080b5f0d7a07276d3ba43187c 108 SMART SM00530 10 69 1.0E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DA442_22030 cd1b5cdf3d46b84f2a96b065432a36d6 231 Gene3D G3DSA:2.60.40.2130 29 176 2.7E-13 T 14-10-2018 IPR038678 Spondin, N-terminal domain superfamily Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 DA442_22030 cd1b5cdf3d46b84f2a96b065432a36d6 231 Pfam PF06468 Spondin_N 45 164 4.1E-10 T 14-10-2018 IPR009465 Spondin, N-terminal Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 DA442_20515 dfe268fcfadc59272b789eaeaecdde37 305 SUPERFAMILY SSF53850 59 277 3.01E-16 T 14-10-2018 DA442_20515 dfe268fcfadc59272b789eaeaecdde37 305 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 66 295 2.3E-45 T 14-10-2018 DA442_20515 dfe268fcfadc59272b789eaeaecdde37 305 Gene3D G3DSA:3.40.190.10 66 276 3.4E-28 T 14-10-2018 DA442_20515 dfe268fcfadc59272b789eaeaecdde37 305 Gene3D G3DSA:3.40.190.10 145 244 3.4E-28 T 14-10-2018 DA442_18265 63b5f4d5916d356832a5b6b5d935faf7 128 SMART SM00862 47 123 1.4E-14 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DA442_18265 63b5f4d5916d356832a5b6b5d935faf7 128 SUPERFAMILY SSF46894 32 123 2.44E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DA442_18265 63b5f4d5916d356832a5b6b5d935faf7 128 Pfam PF00486 Transcriptional regulatory protein, C terminal 48 123 8.5E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DA442_18265 63b5f4d5916d356832a5b6b5d935faf7 128 Gene3D G3DSA:1.10.10.10 22 128 2.8E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_01710 b290438015f4f12aae85b9e8d1a833ef 212 SUPERFAMILY SSF52507 11 207 5.63E-57 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 DA442_01710 b290438015f4f12aae85b9e8d1a833ef 212 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 11 208 34.819 T 14-10-2018 IPR004507 Flavin prenyltransferase UbiX-like DA442_01710 b290438015f4f12aae85b9e8d1a833ef 212 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 13 206 3.4E-57 T 14-10-2018 IPR004507 Flavin prenyltransferase UbiX-like DA442_01710 b290438015f4f12aae85b9e8d1a833ef 212 Pfam PF02441 Flavoprotein 12 187 1.9E-25 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 DA442_01710 b290438015f4f12aae85b9e8d1a833ef 212 Gene3D G3DSA:3.40.50.1950 3 209 6.7E-78 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 DA442_21840 7cb3b7f63fe804dc554dec77dc2464ba 376 Gene3D G3DSA:1.10.287.470 122 190 4.2E-10 T 14-10-2018 DA442_21840 7cb3b7f63fe804dc554dec77dc2464ba 376 Gene3D G3DSA:1.10.287.470 97 115 9.4E-8 T 14-10-2018 DA442_21840 7cb3b7f63fe804dc554dec77dc2464ba 376 SUPERFAMILY SSF111369 63 114 4.71E-6 T 14-10-2018 DA442_21840 7cb3b7f63fe804dc554dec77dc2464ba 376 Gene3D G3DSA:2.40.50.100 63 96 9.4E-8 T 14-10-2018 DA442_21840 7cb3b7f63fe804dc554dec77dc2464ba 376 Gene3D G3DSA:2.40.50.100 220 256 1.5E-13 T 14-10-2018 DA442_21840 7cb3b7f63fe804dc554dec77dc2464ba 376 Pfam PF13533 Biotin-lipoyl like 63 111 2.7E-10 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain DA442_21840 7cb3b7f63fe804dc554dec77dc2464ba 376 Gene3D G3DSA:2.40.30.170 257 329 1.5E-13 T 14-10-2018 DA442_21840 7cb3b7f63fe804dc554dec77dc2464ba 376 Gene3D G3DSA:1.10.287.470 198 219 1.5E-13 T 14-10-2018 DA442_12515 1aa345f4a2a1621a68153e541cf1c908 161 Pfam PF11143 Protein of unknown function (DUF2919) 3 147 4.8E-55 T 14-10-2018 IPR021318 Protein of unknown function DUF2919 DA442_08695 c4f18916baf178a030bde50020647bab 708 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 140 163 - T 14-10-2018 IPR025505 FHIPEP conserved site DA442_08695 c4f18916baf178a030bde50020647bab 708 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 135 151 5.0E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DA442_08695 c4f18916baf178a030bde50020647bab 708 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 154 172 5.0E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DA442_08695 c4f18916baf178a030bde50020647bab 708 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 235 249 5.0E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DA442_08695 c4f18916baf178a030bde50020647bab 708 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 73 92 5.0E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DA442_08695 c4f18916baf178a030bde50020647bab 708 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 36 49 5.0E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DA442_08695 c4f18916baf178a030bde50020647bab 708 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 184 201 5.0E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DA442_08695 c4f18916baf178a030bde50020647bab 708 Gene3D G3DSA:1.10.490.80 608 706 9.8E-34 T 14-10-2018 DA442_08695 c4f18916baf178a030bde50020647bab 708 Gene3D G3DSA:3.40.30.60 372 517 2.4E-46 T 14-10-2018 DA442_08695 c4f18916baf178a030bde50020647bab 708 Gene3D G3DSA:1.10.8.540 518 606 2.8E-32 T 14-10-2018 DA442_08695 c4f18916baf178a030bde50020647bab 708 PIRSF PIRSF005419 3 708 1.0E-263 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DA442_08695 c4f18916baf178a030bde50020647bab 708 TIGRFAM TIGR01399 hrcV: type III secretion protein, HrcV family 17 706 2.9E-300 T 14-10-2018 IPR006302 Type III secretion protein HrcV GO:0015031|GO:0016021 DA442_08695 c4f18916baf178a030bde50020647bab 708 Pfam PF00771 FHIPEP family 29 698 1.0E-237 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DA442_20060 2dce431d6bc22f3658afce743da51f52 398 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 3 395 7.2E-128 T 14-10-2018 IPR017735 Type VI secretion system, FHA domain-containing protein DA442_20060 2dce431d6bc22f3658afce743da51f52 398 SUPERFAMILY SSF49879 28 114 5.36E-22 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 DA442_20060 2dce431d6bc22f3658afce743da51f52 398 Gene3D G3DSA:2.60.200.20 4 120 9.4E-21 T 14-10-2018 DA442_20060 2dce431d6bc22f3658afce743da51f52 398 Pfam PF00498 FHA domain 32 101 1.2E-15 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 DA442_20060 2dce431d6bc22f3658afce743da51f52 398 SMART SM00240 31 82 1.1E-8 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 DA442_13905 8f03d3599fe349cb69069d3cf3f64f88 151 SUPERFAMILY SSF75420 2 83 2.62E-26 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily DA442_13905 8f03d3599fe349cb69069d3cf3f64f88 151 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 24.688 T 14-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 DA442_13905 8f03d3599fe349cb69069d3cf3f64f88 151 Pfam PF17384 RimP C-terminal SH3 domain 86 151 6.1E-21 T 14-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal DA442_13905 8f03d3599fe349cb69069d3cf3f64f88 151 Pfam PF02576 RimP N-terminal domain 12 83 1.7E-29 T 14-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal DA442_13905 8f03d3599fe349cb69069d3cf3f64f88 151 SUPERFAMILY SSF74942 84 151 1.02E-17 T 14-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily DA442_13905 8f03d3599fe349cb69069d3cf3f64f88 151 Gene3D G3DSA:3.30.300.70 1 80 8.7E-27 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily DA442_25335 bc258293da015fa813cb76ad6b4fabba 260 Pfam PF00005 ABC transporter 21 170 1.2E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_25335 bc258293da015fa813cb76ad6b4fabba 260 Gene3D G3DSA:3.40.50.300 1 259 1.8E-63 T 14-10-2018 DA442_25335 bc258293da015fa813cb76ad6b4fabba 260 SMART SM00382 30 219 3.8E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_25335 bc258293da015fa813cb76ad6b4fabba 260 SUPERFAMILY SSF52540 9 237 6.48E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_12830 0f113baf80dfba1aaff3bab9e7c59d2a 345 Pfam PF12069 Protein of unknown function (DUF3549) 3 340 3.2E-135 T 14-10-2018 IPR021936 Protein of unknown function DUF3549 DA442_14530 708b7be94f5c961c4ea3cbda41c699d9 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 26.744 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 DA442_14530 708b7be94f5c961c4ea3cbda41c699d9 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 126 3.2E-44 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 DA442_14530 708b7be94f5c961c4ea3cbda41c699d9 126 Gene3D G3DSA:3.90.470.20 1 126 1.0E-41 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 DA442_14530 708b7be94f5c961c4ea3cbda41c699d9 126 SUPERFAMILY SSF56214 3 125 1.27E-31 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 DA442_14530 708b7be94f5c961c4ea3cbda41c699d9 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 126 2.4E-33 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 DA442_14530 708b7be94f5c961c4ea3cbda41c699d9 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 122 4.7E-22 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 DA442_14530 708b7be94f5c961c4ea3cbda41c699d9 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 87 8.0E-40 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 DA442_09725 a95d909d8f34ae0e2d5f515d5f4e2d9c 45 Pfam PF11665 Protein of unknown function (DUF3265) 18 45 7.1E-13 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_05035 7e5358b90ea362603118405906206f8f 252 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 5 251 1.3E-110 T 14-10-2018 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|MetaCyc: PWY-5532 DA442_05035 7e5358b90ea362603118405906206f8f 252 Gene3D G3DSA:3.40.50.1580 1 252 3.3E-81 T 14-10-2018 DA442_05035 7e5358b90ea362603118405906206f8f 252 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 65 80 - T 14-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 DA442_05035 7e5358b90ea362603118405906206f8f 252 Pfam PF01048 Phosphorylase superfamily 20 244 4.9E-40 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 DA442_05035 7e5358b90ea362603118405906206f8f 252 SUPERFAMILY SSF53167 4 251 1.96E-72 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 DA442_03675 60ab413049b5299bf457a377ae69bd74 220 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 26 202 5.9E-73 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DA442_03675 60ab413049b5299bf457a377ae69bd74 220 PIRSF PIRSF016262 1 216 5.2E-63 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DA442_03675 60ab413049b5299bf457a377ae69bd74 220 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 74 127 2.0E-25 T 14-10-2018 DA442_03675 60ab413049b5299bf457a377ae69bd74 220 Pfam PF03099 Biotin/lipoate A/B protein ligase family 59 158 6.4E-8 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 DA442_03675 60ab413049b5299bf457a377ae69bd74 220 Hamap MF_00013 Octanoyltransferase [lipB]. 4 205 38.262 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DA442_03675 60ab413049b5299bf457a377ae69bd74 220 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 70 85 - T 14-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 DA442_03675 60ab413049b5299bf457a377ae69bd74 220 SUPERFAMILY SSF55681 2 204 2.4E-71 T 14-10-2018 DA442_03675 60ab413049b5299bf457a377ae69bd74 220 Gene3D G3DSA:3.30.930.10 1 203 9.2E-65 T 14-10-2018 DA442_16835 fe34e575a141c30514ee20e46659e7da 194 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 6 189 8.2E-30 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 DA442_16835 fe34e575a141c30514ee20e46659e7da 194 Pfam PF01914 MarC family integral membrane protein 3 192 1.8E-54 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 DA442_19690 9cc789bdeff5339e026957e56af9869a 131 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 8 101 3.0E-50 T 14-10-2018 IPR020483 Uncharacterised protein family YgbA DA442_19690 9cc789bdeff5339e026957e56af9869a 131 Pfam PF11756 Nitrous oxide-stimulated promoter 8 111 6.5E-47 T 14-10-2018 IPR020483 Uncharacterised protein family YgbA DA442_23670 fa20358c133ecfa2138d656bada1a2b5 341 Gene3D G3DSA:1.10.287.470 115 175 2.1E-6 T 14-10-2018 DA442_23670 fa20358c133ecfa2138d656bada1a2b5 341 SUPERFAMILY SSF111369 119 174 3.01E-6 T 14-10-2018 DA442_23670 fa20358c133ecfa2138d656bada1a2b5 341 SUPERFAMILY SSF111369 187 264 7.32E-12 T 14-10-2018 DA442_23670 fa20358c133ecfa2138d656bada1a2b5 341 Gene3D G3DSA:2.40.30.170 223 339 5.1E-35 T 14-10-2018 DA442_23670 fa20358c133ecfa2138d656bada1a2b5 341 Gene3D G3DSA:2.40.50.100 54 86 9.6E-11 T 14-10-2018 DA442_23670 fa20358c133ecfa2138d656bada1a2b5 341 Gene3D G3DSA:1.10.287.470 87 113 9.6E-11 T 14-10-2018 DA442_23670 fa20358c133ecfa2138d656bada1a2b5 341 SUPERFAMILY SSF111369 52 128 4.58E-9 T 14-10-2018 DA442_23670 fa20358c133ecfa2138d656bada1a2b5 341 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 52 284 4.3E-15 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DA442_08850 dd38615c7339748983ad65929f95dc80 82 TIGRFAM TIGR02105 III_needle: type III secretion apparatus needle protein 11 82 1.2E-22 T 14-10-2018 IPR011841 Type III secretion system, needle protein GO:0008565|GO:0009405|GO:0015031 DA442_08850 dd38615c7339748983ad65929f95dc80 82 Gene3D G3DSA:1.20.58.90 1 82 4.9E-13 T 14-10-2018 DA442_08850 dd38615c7339748983ad65929f95dc80 82 Pfam PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF 12 82 2.3E-25 T 14-10-2018 IPR021123 Type III secretion, needle-protein-like GO:0009405|GO:0015031 DA442_08850 dd38615c7339748983ad65929f95dc80 82 SUPERFAMILY SSF140129 2 78 9.81E-24 T 14-10-2018 IPR037203 Type III secretion, needle-protein-like superfamily GO:0009405|GO:0015031 DA442_24590 b3c241093f7c63ab5f33e89945fd433c 457 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 2 456 9.4E-125 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 DA442_24590 b3c241093f7c63ab5f33e89945fd433c 457 Pfam PF00460 Flagella basal body rod protein 5 33 7.5E-6 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 DA442_24590 b3c241093f7c63ab5f33e89945fd433c 457 SUPERFAMILY SSF64518 133 457 2.48E-24 T 14-10-2018 DA442_24590 b3c241093f7c63ab5f33e89945fd433c 457 PRINTS PR01005 Flagellar hook-associated protein signature 122 142 6.3E-10 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 DA442_24590 b3c241093f7c63ab5f33e89945fd433c 457 PRINTS PR01005 Flagellar hook-associated protein signature 10 33 6.3E-10 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 DA442_24590 b3c241093f7c63ab5f33e89945fd433c 457 PRINTS PR01005 Flagellar hook-associated protein signature 155 179 6.3E-10 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 DA442_24590 b3c241093f7c63ab5f33e89945fd433c 457 PRINTS PR01005 Flagellar hook-associated protein signature 213 231 6.3E-10 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 DA442_24590 b3c241093f7c63ab5f33e89945fd433c 457 PRINTS PR01005 Flagellar hook-associated protein signature 48 70 6.3E-10 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 DA442_24590 b3c241093f7c63ab5f33e89945fd433c 457 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 402 456 3.9E-7 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DA442_03270 e2da56a7b15575f847ded3f5d19e1e43 279 Gene3D G3DSA:3.20.20.70 4 279 5.4E-60 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_03270 e2da56a7b15575f847ded3f5d19e1e43 279 Pfam PF05853 beta-keto acid cleavage enzyme 11 278 9.0E-58 T 14-10-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247 DA442_01790 3743f9bc0a9745b693d7c032ddec0bf4 266 Pfam PF06738 Putative threonine/serine exporter 21 258 2.4E-67 T 14-10-2018 IPR010619 Putative threonine/serine exporter DA442_21450 53c7acde492ace681f87ffcc681d0e98 372 Gene3D G3DSA:3.40.50.300 1 238 1.1E-74 T 14-10-2018 DA442_21450 53c7acde492ace681f87ffcc681d0e98 372 Pfam PF00005 ABC transporter 20 161 2.1E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_21450 53c7acde492ace681f87ffcc681d0e98 372 Gene3D G3DSA:2.40.50.140 287 344 1.0E-50 T 14-10-2018 DA442_21450 53c7acde492ace681f87ffcc681d0e98 372 Gene3D G3DSA:2.40.50.100 239 361 1.0E-50 T 14-10-2018 DA442_21450 53c7acde492ace681f87ffcc681d0e98 372 Pfam PF08402 TOBE domain 281 353 9.3E-12 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 DA442_21450 53c7acde492ace681f87ffcc681d0e98 372 SMART SM00382 28 210 2.2E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_21450 53c7acde492ace681f87ffcc681d0e98 372 SUPERFAMILY SSF50331 236 362 7.05E-31 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DA442_21450 53c7acde492ace681f87ffcc681d0e98 372 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_21450 53c7acde492ace681f87ffcc681d0e98 372 SUPERFAMILY SSF52540 4 244 4.39E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_09635 edb0acc5fbee883e6614de4ff6ac6bb4 29 Pfam PF11665 Protein of unknown function (DUF3265) 2 29 1.1E-15 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_09935 edb0acc5fbee883e6614de4ff6ac6bb4 29 Pfam PF11665 Protein of unknown function (DUF3265) 2 29 1.1E-15 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_22680 e055003a53cb6eb3e5f62a9e1c69753d 254 Gene3D G3DSA:3.40.50.300 1 253 1.4E-69 T 14-10-2018 DA442_22680 e055003a53cb6eb3e5f62a9e1c69753d 254 SMART SM00382 26 213 2.9E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_22680 e055003a53cb6eb3e5f62a9e1c69753d 254 SUPERFAMILY SSF52540 2 226 7.3E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_22680 e055003a53cb6eb3e5f62a9e1c69753d 254 Pfam PF00005 ABC transporter 19 165 4.0E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_22680 e055003a53cb6eb3e5f62a9e1c69753d 254 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_09100 08295a47460eea3a4433471aa66442d9 508 PIRSF PIRSF006615 17 508 3.9E-199 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DA442_09100 08295a47460eea3a4433471aa66442d9 508 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 279 298 2.3E-44 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DA442_09100 08295a47460eea3a4433471aa66442d9 508 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 306 322 2.3E-44 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DA442_09100 08295a47460eea3a4433471aa66442d9 508 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 345 364 2.3E-44 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DA442_09100 08295a47460eea3a4433471aa66442d9 508 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 259 278 2.3E-44 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DA442_09100 08295a47460eea3a4433471aa66442d9 508 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 415 436 2.3E-44 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DA442_09100 08295a47460eea3a4433471aa66442d9 508 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 163 183 2.3E-44 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DA442_09100 08295a47460eea3a4433471aa66442d9 508 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 459 477 2.3E-44 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DA442_09100 08295a47460eea3a4433471aa66442d9 508 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 27 507 1.0E-92 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DA442_09100 08295a47460eea3a4433471aa66442d9 508 SUPERFAMILY SSF55486 17 508 1.15E-118 T 14-10-2018 DA442_09100 08295a47460eea3a4433471aa66442d9 508 Gene3D G3DSA:1.10.1370.30 17 508 5.6E-196 T 14-10-2018 DA442_09260 dd9d36fbcfcdfd42cb370518034628a4 185 SMART SM00530 9 64 5.0E-18 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DA442_09260 dd9d36fbcfcdfd42cb370518034628a4 185 Gene3D G3DSA:2.60.120.10 73 179 1.2E-15 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DA442_09260 dd9d36fbcfcdfd42cb370518034628a4 185 SUPERFAMILY SSF51182 49 183 3.93E-24 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DA442_09260 dd9d36fbcfcdfd42cb370518034628a4 185 SUPERFAMILY SSF47413 2 70 1.31E-20 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DA442_09260 dd9d36fbcfcdfd42cb370518034628a4 185 Gene3D G3DSA:1.10.260.40 1 66 4.3E-22 T 14-10-2018 DA442_09260 dd9d36fbcfcdfd42cb370518034628a4 185 Pfam PF07883 Cupin domain 111 178 1.5E-16 T 14-10-2018 IPR013096 Cupin 2, conserved barrel DA442_09260 dd9d36fbcfcdfd42cb370518034628a4 185 Pfam PF01381 Helix-turn-helix 12 64 1.0E-17 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DA442_00860 25b4b38bc266da9b422f96ad7903882a 175 Pfam PF01618 MotA/TolQ/ExbB proton channel family 59 168 2.1E-20 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel DA442_01405 dda0310fe0ad859908a29f4cdefe46ff 734 SUPERFAMILY SSF52540 71 380 3.66E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_01405 dda0310fe0ad859908a29f4cdefe46ff 734 SUPERFAMILY SSF52540 462 632 1.83E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_01405 dda0310fe0ad859908a29f4cdefe46ff 734 Pfam PF00270 DEAD/DEAH box helicase 220 365 1.2E-14 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DA442_01405 dda0310fe0ad859908a29f4cdefe46ff 734 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 733 25.42 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 DA442_01405 dda0310fe0ad859908a29f4cdefe46ff 734 Gene3D G3DSA:3.40.50.300 186 380 4.1E-77 T 14-10-2018 DA442_01405 dda0310fe0ad859908a29f4cdefe46ff 734 SMART SM00487 197 396 7.7E-18 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DA442_01405 dda0310fe0ad859908a29f4cdefe46ff 734 SMART SM00490 493 590 3.9E-13 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_01405 dda0310fe0ad859908a29f4cdefe46ff 734 Gene3D G3DSA:1.10.8.630 4 113 2.2E-35 T 14-10-2018 DA442_01405 dda0310fe0ad859908a29f4cdefe46ff 734 Pfam PF00271 Helicase conserved C-terminal domain 500 589 1.8E-8 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_01405 dda0310fe0ad859908a29f4cdefe46ff 734 TIGRFAM TIGR00595 priA: primosomal protein N' 222 730 2.0E-192 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 DA442_23390 19f9dbed5bf9767aa1dd70978539319d 299 Pfam PF03466 LysR substrate binding domain 126 278 1.8E-10 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_23390 19f9dbed5bf9767aa1dd70978539319d 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 4.4E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_23390 19f9dbed5bf9767aa1dd70978539319d 299 Gene3D G3DSA:1.10.10.10 1 83 1.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_23390 19f9dbed5bf9767aa1dd70978539319d 299 SUPERFAMILY SSF53850 90 279 4.71E-16 T 14-10-2018 DA442_23390 19f9dbed5bf9767aa1dd70978539319d 299 Gene3D G3DSA:3.40.190.290 130 277 1.5E-5 T 14-10-2018 DA442_23390 19f9dbed5bf9767aa1dd70978539319d 299 SUPERFAMILY SSF46785 1 81 1.19E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_23390 19f9dbed5bf9767aa1dd70978539319d 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.9E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_23390 19f9dbed5bf9767aa1dd70978539319d 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.9E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_23390 19f9dbed5bf9767aa1dd70978539319d 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.9E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_11905 13bca30c9e2d2a16cd89259053c80a73 602 PIRSF PIRSF004950 6 600 6.3E-255 T 14-10-2018 IPR012159 Inner membrane protein YejM DA442_11905 13bca30c9e2d2a16cd89259053c80a73 602 Gene3D G3DSA:3.40.720.10 248 548 4.2E-38 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DA442_11905 13bca30c9e2d2a16cd89259053c80a73 602 Pfam PF11893 Domain of unknown function (DUF3413) 6 250 5.3E-99 T 14-10-2018 IPR024588 Inner membrane protein YejM, N-terminal DA442_11905 13bca30c9e2d2a16cd89259053c80a73 602 Pfam PF00884 Sulfatase 267 515 6.5E-21 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 DA442_11905 13bca30c9e2d2a16cd89259053c80a73 602 SUPERFAMILY SSF53649 257 584 1.05E-51 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DA442_25210 f9c340706170717a437b26cfdbe4b871 108 Pfam PF13698 Domain of unknown function (DUF4156) 22 106 8.0E-23 T 14-10-2018 IPR025294 Protein of unknown function DUF4156 DA442_09610 bddcd25ccb8522006044a955c84f6267 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 2.5E-16 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_01345 b95a25f5633231d84fc45f61a1898b84 140 Pfam PF05656 Protein of unknown function (DUF805) 8 139 5.3E-20 T 14-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 DA442_16830 f9c6a561672ee2879f13e1d026d281d4 88 Pfam PF06611 Protein of unknown function (DUF1145) 4 59 6.5E-19 T 14-10-2018 IPR009525 Protein of unknown function DUF1145 DA442_02260 12c41656d3bf24a2432f199024a47839 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 14-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 DA442_02260 12c41656d3bf24a2432f199024a47839 130 Gene3D G3DSA:3.30.230.10 1 130 8.7E-54 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DA442_02260 12c41656d3bf24a2432f199024a47839 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.87 T 14-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid DA442_02260 12c41656d3bf24a2432f199024a47839 130 SUPERFAMILY SSF54211 5 130 3.53E-48 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DA442_02260 12c41656d3bf24a2432f199024a47839 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 2.9E-46 T 14-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 DA442_02935 95ffc813ee7905fda4e9a1d9ad822a20 466 Pfam PF16325 Peptidase family U32 C-terminal domain 372 452 3.2E-21 T 14-10-2018 IPR032525 Peptidase family U32, C-terminal DA442_02935 95ffc813ee7905fda4e9a1d9ad822a20 466 ProSitePatterns PS01276 Peptidase family U32 signature. 167 185 - T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 DA442_02935 95ffc813ee7905fda4e9a1d9ad822a20 466 Gene3D G3DSA:2.40.30.10 367 453 1.1E-8 T 14-10-2018 DA442_02935 95ffc813ee7905fda4e9a1d9ad822a20 466 Pfam PF01136 Peptidase family U32 80 355 2.4E-96 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 DA442_12135 416a49d3cbb0d29977e4e7dd90b86a2d 308 Gene3D G3DSA:3.90.226.10 25 285 7.7E-82 T 14-10-2018 DA442_12135 416a49d3cbb0d29977e4e7dd90b86a2d 308 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 284 2.4E-140 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DA442_12135 416a49d3cbb0d29977e4e7dd90b86a2d 308 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 37.517 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DA442_12135 416a49d3cbb0d29977e4e7dd90b86a2d 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 7.1E-39 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DA442_12135 416a49d3cbb0d29977e4e7dd90b86a2d 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 7.1E-39 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DA442_12135 416a49d3cbb0d29977e4e7dd90b86a2d 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 7.1E-39 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DA442_12135 416a49d3cbb0d29977e4e7dd90b86a2d 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 7.1E-39 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DA442_12135 416a49d3cbb0d29977e4e7dd90b86a2d 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 7.1E-39 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DA442_12135 416a49d3cbb0d29977e4e7dd90b86a2d 308 SUPERFAMILY SSF52096 25 282 2.27E-84 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DA442_12135 416a49d3cbb0d29977e4e7dd90b86a2d 308 Pfam PF01039 Carboxyl transferase domain 100 240 5.4E-14 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 DA442_24500 29ff3c9e184d8cf34b102854538171be 280 Pfam PF02698 DUF218 domain 6 133 8.1E-17 T 14-10-2018 IPR003848 Domain of unknown function DUF218 DA442_23455 39420da001cda114a44e3a5c7e30cd91 285 Pfam PF12146 Serine aminopeptidase, S33 83 184 1.5E-11 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 DA442_23455 39420da001cda114a44e3a5c7e30cd91 285 SUPERFAMILY SSF53474 33 268 1.88E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_23455 39420da001cda114a44e3a5c7e30cd91 285 Gene3D G3DSA:3.40.50.1820 64 278 1.0E-30 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_05585 b154700acdb6730ce2ed01e81ddc5b87 304 SUPERFAMILY SSF110849 45 120 6.45E-5 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily DA442_24710 2eee23198e1fccbfbda970ff0e2cce0e 806 Gene3D G3DSA:2.70.98.10 44 396 3.5E-206 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 DA442_24710 2eee23198e1fccbfbda970ff0e2cce0e 806 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 41 794 5.0E-150 T 14-10-2018 IPR005887 Alpha-1,2-mannosidase, putative DA442_24710 2eee23198e1fccbfbda970ff0e2cce0e 806 Pfam PF07971 Glycosyl hydrolase family 92 285 793 1.3E-138 T 14-10-2018 IPR012939 Glycosyl hydrolase family 92 DA442_24710 2eee23198e1fccbfbda970ff0e2cce0e 806 Gene3D G3DSA:1.20.1050.60 397 499 3.5E-206 T 14-10-2018 DA442_24710 2eee23198e1fccbfbda970ff0e2cce0e 806 Gene3D G3DSA:3.30.2080.10 342 796 3.5E-206 T 14-10-2018 DA442_24710 2eee23198e1fccbfbda970ff0e2cce0e 806 SUPERFAMILY SSF48208 307 776 2.21E-22 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 DA442_24710 2eee23198e1fccbfbda970ff0e2cce0e 806 Gene3D G3DSA:1.20.1610.10 500 669 3.5E-206 T 14-10-2018 DA442_25290 a3daa377ae98983041c6abf7f6bb4703 276 SUPERFAMILY SSF52402 2 276 7.39E-81 T 14-10-2018 DA442_25290 a3daa377ae98983041c6abf7f6bb4703 276 Gene3D G3DSA:3.40.50.620 1 276 3.4E-81 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DA442_25290 a3daa377ae98983041c6abf7f6bb4703 276 TIGRFAM TIGR00552 nadE: NAD+ synthetase 20 272 2.1E-65 T 14-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 DA442_25290 a3daa377ae98983041c6abf7f6bb4703 276 Pfam PF02540 NAD synthase 21 270 5.4E-64 T 14-10-2018 IPR022310 NAD/GMP synthase DA442_25290 a3daa377ae98983041c6abf7f6bb4703 276 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 16 274 46.979 T 14-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 DA442_22195 04e6744aef1f6febcf9f6dc5c3b3f91f 128 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 123 8.5E-23 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 DA442_22195 04e6744aef1f6febcf9f6dc5c3b3f91f 128 Pfam PF02561 Flagellar protein FliS 7 122 5.3E-33 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 DA442_22195 04e6744aef1f6febcf9f6dc5c3b3f91f 128 PIRSF PIRSF039090 1 128 5.2E-40 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 DA442_22195 04e6744aef1f6febcf9f6dc5c3b3f91f 128 SUPERFAMILY SSF101116 9 126 1.11E-34 T 14-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 DA442_22195 04e6744aef1f6febcf9f6dc5c3b3f91f 128 Gene3D G3DSA:1.20.120.340 1 127 4.0E-36 T 14-10-2018 DA442_11065 8da3b0e82a02c1a736eb2e11cbe19f7c 433 PRINTS PR00173 Glutamate-aspartate symporter signature 244 263 9.6E-53 T 14-10-2018 DA442_11065 8da3b0e82a02c1a736eb2e11cbe19f7c 433 PRINTS PR00173 Glutamate-aspartate symporter signature 161 183 9.6E-53 T 14-10-2018 DA442_11065 8da3b0e82a02c1a736eb2e11cbe19f7c 433 PRINTS PR00173 Glutamate-aspartate symporter signature 21 41 9.6E-53 T 14-10-2018 DA442_11065 8da3b0e82a02c1a736eb2e11cbe19f7c 433 PRINTS PR00173 Glutamate-aspartate symporter signature 346 365 9.6E-53 T 14-10-2018 DA442_11065 8da3b0e82a02c1a736eb2e11cbe19f7c 433 PRINTS PR00173 Glutamate-aspartate symporter signature 209 228 9.6E-53 T 14-10-2018 DA442_11065 8da3b0e82a02c1a736eb2e11cbe19f7c 433 PRINTS PR00173 Glutamate-aspartate symporter signature 372 392 9.6E-53 T 14-10-2018 DA442_11065 8da3b0e82a02c1a736eb2e11cbe19f7c 433 PRINTS PR00173 Glutamate-aspartate symporter signature 62 82 9.6E-53 T 14-10-2018 DA442_11065 8da3b0e82a02c1a736eb2e11cbe19f7c 433 PRINTS PR00173 Glutamate-aspartate symporter signature 311 337 9.6E-53 T 14-10-2018 DA442_11065 8da3b0e82a02c1a736eb2e11cbe19f7c 433 PRINTS PR00173 Glutamate-aspartate symporter signature 92 117 9.6E-53 T 14-10-2018 DA442_11065 8da3b0e82a02c1a736eb2e11cbe19f7c 433 Gene3D G3DSA:1.10.3860.10 15 432 2.7E-117 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 DA442_11065 8da3b0e82a02c1a736eb2e11cbe19f7c 433 SUPERFAMILY SSF118215 29 417 9.02E-110 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 DA442_11065 8da3b0e82a02c1a736eb2e11cbe19f7c 433 Pfam PF00375 Sodium:dicarboxylate symporter family 29 417 8.2E-119 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DA442_03400 2cfdba1dca37725b0dc80fc87e79b342 519 Pfam PF03806 AbgT putative transporter family 19 517 1.9E-210 T 14-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 DA442_15955 2d371387a4767901846a0645ed8092d3 400 Pfam PF12221 Bacterial membrane protein N terminal 1 58 4.9E-14 T 14-10-2018 IPR020980 Menbrane protein HflK, N-terminal DA442_15955 2d371387a4767901846a0645ed8092d3 400 Gene3D G3DSA:3.30.479.30 118 250 4.8E-22 T 14-10-2018 DA442_15955 2d371387a4767901846a0645ed8092d3 400 Pfam PF01145 SPFH domain / Band 7 family 92 263 8.8E-29 T 14-10-2018 IPR001107 Band 7 domain DA442_15955 2d371387a4767901846a0645ed8092d3 400 SUPERFAMILY SSF117892 125 253 9.42E-22 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily DA442_15955 2d371387a4767901846a0645ed8092d3 400 SMART SM00244 88 248 2.1E-52 T 14-10-2018 IPR001107 Band 7 domain DA442_15955 2d371387a4767901846a0645ed8092d3 400 TIGRFAM TIGR01933 hflK: HflK protein 90 350 1.5E-121 T 14-10-2018 IPR010201 HflK GO:0016021 DA442_15955 2d371387a4767901846a0645ed8092d3 400 PRINTS PR00721 Stomatin signature 95 117 1.3E-6 T 14-10-2018 IPR001972 Stomatin family GO:0016020 DA442_15955 2d371387a4767901846a0645ed8092d3 400 PRINTS PR00721 Stomatin signature 198 221 1.3E-6 T 14-10-2018 IPR001972 Stomatin family GO:0016020 DA442_15955 2d371387a4767901846a0645ed8092d3 400 PRINTS PR00721 Stomatin signature 142 163 1.3E-6 T 14-10-2018 IPR001972 Stomatin family GO:0016020 DA442_25900 938c12f9ed11f9a225f2700ee68603ae 302 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 18 294 1.7E-97 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 DA442_25900 938c12f9ed11f9a225f2700ee68603ae 302 Gene3D G3DSA:1.10.357.140 22 181 1.8E-20 T 14-10-2018 DA442_25900 938c12f9ed11f9a225f2700ee68603ae 302 Pfam PF01040 UbiA prenyltransferase family 32 277 6.8E-62 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 DA442_25900 938c12f9ed11f9a225f2700ee68603ae 302 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 70 92 - T 14-10-2018 IPR030470 UbiA prenyltransferase conserved site DA442_25900 938c12f9ed11f9a225f2700ee68603ae 302 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 15 296 19.424 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 DA442_11720 136f722dee44ac8741fa7bbdd8c877cc 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 158 36.085 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DA442_11720 136f722dee44ac8741fa7bbdd8c877cc 159 SUPERFAMILY SSF55040 11 155 1.96E-61 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DA442_11720 136f722dee44ac8741fa7bbdd8c877cc 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 6.0E-72 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DA442_11720 136f722dee44ac8741fa7bbdd8c877cc 159 Pfam PF01967 MoaC family 15 150 9.8E-56 T 14-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DA442_11720 136f722dee44ac8741fa7bbdd8c877cc 159 Gene3D G3DSA:3.30.70.640 1 159 4.9E-70 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DA442_25015 dae80abb56e4c0f4797858c5b5ff2a8c 217 SUPERFAMILY SSF46894 149 215 4.76E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DA442_25015 dae80abb56e4c0f4797858c5b5ff2a8c 217 Gene3D G3DSA:1.10.10.10 154 216 1.7E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_25015 dae80abb56e4c0f4797858c5b5ff2a8c 217 SMART SM00421 155 212 1.8E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_25015 dae80abb56e4c0f4797858c5b5ff2a8c 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 172 2.6E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_25015 dae80abb56e4c0f4797858c5b5ff2a8c 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 188 2.6E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_25015 dae80abb56e4c0f4797858c5b5ff2a8c 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 188 200 2.6E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_25015 dae80abb56e4c0f4797858c5b5ff2a8c 217 Gene3D G3DSA:3.40.50.2300 9 144 4.5E-25 T 14-10-2018 DA442_25015 dae80abb56e4c0f4797858c5b5ff2a8c 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 157 212 2.2E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_25015 dae80abb56e4c0f4797858c5b5ff2a8c 217 ProSitePatterns PS00622 LuxR-type HTH domain signature. 172 199 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_15205 856ecf38943ec8d23d046ea3e5373786 320 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 196 218 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DA442_15205 856ecf38943ec8d23d046ea3e5373786 320 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 225 241 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DA442_15205 856ecf38943ec8d23d046ea3e5373786 320 SUPERFAMILY SSF51735 103 290 3.52E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_15205 856ecf38943ec8d23d046ea3e5373786 320 SUPERFAMILY SSF52283 4 139 2.65E-32 T 14-10-2018 DA442_15205 856ecf38943ec8d23d046ea3e5373786 320 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 289 4.1E-56 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 DA442_15205 856ecf38943ec8d23d046ea3e5373786 320 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 36 315 2.3E-23 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 DA442_15205 856ecf38943ec8d23d046ea3e5373786 320 Gene3D G3DSA:3.40.50.720 27 315 2.9E-111 T 14-10-2018 DA442_15205 856ecf38943ec8d23d046ea3e5373786 320 Gene3D G3DSA:3.40.50.720 99 288 2.9E-111 T 14-10-2018 DA442_18010 54b67ff675ee1374a385bffb18d32ee3 293 SUPERFAMILY SSF49503 122 280 5.96E-49 T 14-10-2018 IPR008972 Cupredoxin DA442_18010 54b67ff675ee1374a385bffb18d32ee3 293 Gene3D G3DSA:2.60.40.420 113 281 2.6E-54 T 14-10-2018 IPR008972 Cupredoxin DA442_18010 54b67ff675ee1374a385bffb18d32ee3 293 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 16 239 4.8E-114 T 14-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 DA442_18010 54b67ff675ee1374a385bffb18d32ee3 293 Gene3D G3DSA:1.10.287.90 27 112 1.7E-34 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_18010 54b67ff675ee1374a385bffb18d32ee3 293 Pfam PF06481 COX Aromatic Rich Motif 239 283 3.2E-13 T 14-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 DA442_18010 54b67ff675ee1374a385bffb18d32ee3 293 SUPERFAMILY SSF81464 29 116 4.09E-24 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_18010 54b67ff675ee1374a385bffb18d32ee3 293 PIRSF PIRSF000292 1 292 4.5E-127 T 14-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 DA442_18010 54b67ff675ee1374a385bffb18d32ee3 293 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 148 221 1.1E-7 T 14-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_08050 76fee57cf36bde44eaccb3d31e2ce2f8 207 SUPERFAMILY SSF53448 19 201 2.14E-35 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DA442_08050 76fee57cf36bde44eaccb3d31e2ce2f8 207 Gene3D G3DSA:3.90.550.10 15 205 2.2E-58 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DA442_08050 76fee57cf36bde44eaccb3d31e2ce2f8 207 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 17 202 30.234 T 14-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 DA442_08050 76fee57cf36bde44eaccb3d31e2ce2f8 207 Pfam PF12804 MobA-like NTP transferase domain 22 170 2.8E-34 T 14-10-2018 IPR025877 MobA-like NTP transferase DA442_08050 76fee57cf36bde44eaccb3d31e2ce2f8 207 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 20 200 3.3E-73 T 14-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 DA442_03580 d663da9f57f7fc40b430fe02984d7bd1 453 Pfam PF11892 Domain of unknown function (DUF3412) 330 450 9.1E-56 T 14-10-2018 IPR021826 Domain of unknown function DUF3412 KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 DA442_03580 d663da9f57f7fc40b430fe02984d7bd1 453 Gene3D G3DSA:3.40.50.450 121 450 2.1E-124 T 14-10-2018 DA442_03580 d663da9f57f7fc40b430fe02984d7bd1 453 SUPERFAMILY SSF102405 119 327 1.16E-42 T 14-10-2018 DA442_03580 d663da9f57f7fc40b430fe02984d7bd1 453 Pfam PF14793 Domain of unknown function (DUF4478) 4 109 1.1E-49 T 14-10-2018 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 DA442_03580 d663da9f57f7fc40b430fe02984d7bd1 453 Pfam PF03641 Possible lysine decarboxylase 187 326 1.5E-35 T 14-10-2018 IPR031100 LOG family DA442_03580 d663da9f57f7fc40b430fe02984d7bd1 453 Gene3D G3DSA:3.30.1850.10 1 120 3.1E-56 T 14-10-2018 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 DA442_22700 7699ce601292f4bf50ae166c4015037d 712 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 56 - T 14-10-2018 IPR010916 TonB box, conserved site DA442_22700 7699ce601292f4bf50ae166c4015037d 712 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 68 712 8.3E-165 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 DA442_22700 7699ce601292f4bf50ae166c4015037d 712 Pfam PF00593 TonB dependent receptor 265 711 2.9E-47 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DA442_22700 7699ce601292f4bf50ae166c4015037d 712 SUPERFAMILY SSF56935 39 712 6.41E-124 T 14-10-2018 DA442_22700 7699ce601292f4bf50ae166c4015037d 712 Gene3D G3DSA:2.170.130.10 64 185 1.1E-29 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DA442_22700 7699ce601292f4bf50ae166c4015037d 712 Pfam PF07715 TonB-dependent Receptor Plug Domain 66 177 2.6E-24 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain DA442_22700 7699ce601292f4bf50ae166c4015037d 712 Gene3D G3DSA:2.40.170.20 192 712 8.1E-115 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DA442_23755 73d018f362e375b9ffc3a4e36fd240f0 380 SUPERFAMILY SSF46689 323 352 4.44E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_23755 73d018f362e375b9ffc3a4e36fd240f0 380 Pfam PF05651 Putative sugar diacid recognition 4 137 2.5E-51 T 14-10-2018 IPR008599 Putative sugar diacid recognition DA442_23755 73d018f362e375b9ffc3a4e36fd240f0 380 Pfam PF13556 PucR C-terminal helix-turn-helix domain 318 375 6.4E-21 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain DA442_23755 73d018f362e375b9ffc3a4e36fd240f0 380 Gene3D G3DSA:1.10.10.2840 252 380 6.9E-22 T 14-10-2018 DA442_21115 e075a3390e09f54a590f4e9bae0d7b9c 333 Pfam PF12833 Helix-turn-helix domain 256 328 7.5E-12 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_21115 e075a3390e09f54a590f4e9bae0d7b9c 333 SUPERFAMILY SSF46689 290 329 4.08E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_21115 e075a3390e09f54a590f4e9bae0d7b9c 333 SMART SM00342 247 328 1.2E-10 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DA442_21115 e075a3390e09f54a590f4e9bae0d7b9c 333 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 29 195 2.4E-17 T 14-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal DA442_21115 e075a3390e09f54a590f4e9bae0d7b9c 333 Gene3D G3DSA:1.10.10.60 234 332 1.3E-15 T 14-10-2018 DA442_21115 e075a3390e09f54a590f4e9bae0d7b9c 333 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 312 328 6.9E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DA442_21115 e075a3390e09f54a590f4e9bae0d7b9c 333 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 297 312 6.9E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DA442_15095 5ac54a5a25634668ef0ba7ba95ce8563 129 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 127 1.2E-53 T 14-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 DA442_15095 5ac54a5a25634668ef0ba7ba95ce8563 129 Pfam PF01042 Endoribonuclease L-PSP 8 127 2.7E-45 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 DA442_15095 5ac54a5a25634668ef0ba7ba95ce8563 129 SUPERFAMILY SSF55298 2 128 3.46E-44 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DA442_15095 5ac54a5a25634668ef0ba7ba95ce8563 129 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 104 122 - T 14-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 DA442_15095 5ac54a5a25634668ef0ba7ba95ce8563 129 Gene3D G3DSA:3.30.1330.40 2 129 5.4E-48 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DA442_22905 8d0d9f1fedeb2bd7a8597c82bbaeb9d4 437 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 142 172 - T 14-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 DA442_22905 8d0d9f1fedeb2bd7a8597c82bbaeb9d4 437 Gene3D G3DSA:3.40.50.720 1 170 7.8E-65 T 14-10-2018 DA442_22905 8d0d9f1fedeb2bd7a8597c82bbaeb9d4 437 Gene3D G3DSA:3.90.110.10 171 437 7.7E-94 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DA442_22905 8d0d9f1fedeb2bd7a8597c82bbaeb9d4 437 SUPERFAMILY SSF51735 3 170 1.85E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_22905 8d0d9f1fedeb2bd7a8597c82bbaeb9d4 437 Pfam PF02056 Family 4 glycosyl hydrolase 6 187 1.5E-58 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DA442_22905 8d0d9f1fedeb2bd7a8597c82bbaeb9d4 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 99 112 1.7E-41 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DA442_22905 8d0d9f1fedeb2bd7a8597c82bbaeb9d4 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 1.7E-41 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DA442_22905 8d0d9f1fedeb2bd7a8597c82bbaeb9d4 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 142 159 1.7E-41 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DA442_22905 8d0d9f1fedeb2bd7a8597c82bbaeb9d4 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 1.7E-41 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DA442_22905 8d0d9f1fedeb2bd7a8597c82bbaeb9d4 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 113 133 1.7E-41 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DA442_22905 8d0d9f1fedeb2bd7a8597c82bbaeb9d4 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 1.7E-41 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DA442_22905 8d0d9f1fedeb2bd7a8597c82bbaeb9d4 437 PRINTS PR00732 Glycosyl hydrolase family 4 signature 78 94 1.7E-41 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DA442_22905 8d0d9f1fedeb2bd7a8597c82bbaeb9d4 437 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 412 1.5E-51 T 14-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 DA442_22905 8d0d9f1fedeb2bd7a8597c82bbaeb9d4 437 SUPERFAMILY SSF56327 173 436 5.1E-85 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DA442_06600 fc5175ffd378c83330d2cfb80673447f 793 Pfam PF03176 MMPL family 63 385 2.5E-22 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 DA442_06600 fc5175ffd378c83330d2cfb80673447f 793 Pfam PF03176 MMPL family 589 769 2.5E-14 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 DA442_06600 fc5175ffd378c83330d2cfb80673447f 793 SUPERFAMILY SSF82866 617 769 1.44E-33 T 14-10-2018 DA442_06600 fc5175ffd378c83330d2cfb80673447f 793 Gene3D G3DSA:1.20.1640.10 588 778 2.9E-17 T 14-10-2018 DA442_06600 fc5175ffd378c83330d2cfb80673447f 793 Gene3D G3DSA:1.20.1640.10 185 401 6.5E-11 T 14-10-2018 DA442_06600 fc5175ffd378c83330d2cfb80673447f 793 SUPERFAMILY SSF82866 160 383 9.16E-31 T 14-10-2018 DA442_18090 746a414d395f7970753566e727d90ca9 277 Gene3D G3DSA:3.40.190.10 159 249 9.8E-42 T 14-10-2018 DA442_18090 746a414d395f7970753566e727d90ca9 277 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.7E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_18090 746a414d395f7970753566e727d90ca9 277 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.7E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_18090 746a414d395f7970753566e727d90ca9 277 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.7E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_18090 746a414d395f7970753566e727d90ca9 277 Pfam PF03466 LysR substrate binding domain 88 255 1.4E-21 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_18090 746a414d395f7970753566e727d90ca9 277 SUPERFAMILY SSF53850 88 255 2.79E-22 T 14-10-2018 DA442_18090 746a414d395f7970753566e727d90ca9 277 Gene3D G3DSA:1.10.10.10 1 91 2.6E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_18090 746a414d395f7970753566e727d90ca9 277 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 7.1E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_18090 746a414d395f7970753566e727d90ca9 277 Gene3D G3DSA:3.40.190.10 93 254 9.8E-42 T 14-10-2018 DA442_18090 746a414d395f7970753566e727d90ca9 277 SUPERFAMILY SSF46785 1 87 8.16E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_06005 59a8bfcc09462f9d7c61c0e7ca82d1ea 295 Gene3D G3DSA:1.10.3720.10 85 291 3.8E-18 T 14-10-2018 IPR035906 MetI-like superfamily DA442_06005 59a8bfcc09462f9d7c61c0e7ca82d1ea 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 293 1.0E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DA442_06005 59a8bfcc09462f9d7c61c0e7ca82d1ea 295 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 65 2.3E-13 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DA442_06005 59a8bfcc09462f9d7c61c0e7ca82d1ea 295 SUPERFAMILY SSF161098 89 276 7.98E-22 T 14-10-2018 IPR035906 MetI-like superfamily DA442_09820 bcf7e7ba34eeadf7b6f2420aa1bafd8a 36 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 3.2E-12 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_07315 edbc3ccd9f0c607c7eb6a212da081ec5 357 SUPERFAMILY SSF52091 3 84 1.06E-10 T 14-10-2018 IPR036513 STAS domain superfamily DA442_07315 edbc3ccd9f0c607c7eb6a212da081ec5 357 Pfam PF13466 STAS domain 8 82 3.1E-8 T 14-10-2018 IPR002645 STAS domain DA442_07315 edbc3ccd9f0c607c7eb6a212da081ec5 357 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 126 356 5.3E-64 T 14-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria DA442_07315 edbc3ccd9f0c607c7eb6a212da081ec5 357 Gene3D G3DSA:3.30.750.24 2 90 6.0E-8 T 14-10-2018 IPR036513 STAS domain superfamily DA442_07315 edbc3ccd9f0c607c7eb6a212da081ec5 357 Pfam PF02405 Permease MlaE 150 355 6.0E-67 T 14-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 DA442_23695 380c1b0568177d3e4ca00aa540498357 896 Gene3D G3DSA:2.70.98.50 35 275 3.5E-82 T 14-10-2018 DA442_23695 380c1b0568177d3e4ca00aa540498357 896 Gene3D G3DSA:1.10.287.100 276 314 7.4E-14 T 14-10-2018 DA442_23695 380c1b0568177d3e4ca00aa540498357 896 SUPERFAMILY SSF48208 326 891 5.67E-67 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 DA442_09215 34b6cf7900298b81539fbaa42f3c9a8d 502 Gene3D G3DSA:3.20.20.450 257 497 4.8E-65 T 14-10-2018 IPR035919 EAL domain superfamily DA442_09215 34b6cf7900298b81539fbaa42f3c9a8d 502 SUPERFAMILY SSF141868 264 496 3.27E-64 T 14-10-2018 IPR035919 EAL domain superfamily DA442_09215 34b6cf7900298b81539fbaa42f3c9a8d 502 SMART SM00052 256 494 1.0E-66 T 14-10-2018 IPR001633 EAL domain DA442_09215 34b6cf7900298b81539fbaa42f3c9a8d 502 Pfam PF00563 EAL domain 264 489 6.6E-52 T 14-10-2018 IPR001633 EAL domain DA442_07020 b9374fc24f9f3e83805b8291b9245892 216 Pfam PF07105 Protein of unknown function (DUF1367) 29 215 3.5E-48 T 14-10-2018 IPR009797 Protein of unknown function DUF1367 DA442_20685 53b51771a7bdcde145c904b7c55a661f 302 SUPERFAMILY SSF51430 6 293 1.01E-69 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DA442_20685 53b51771a7bdcde145c904b7c55a661f 302 Pfam PF00248 Aldo/keto reductase family 16 291 4.0E-59 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain DA442_20685 53b51771a7bdcde145c904b7c55a661f 302 Gene3D G3DSA:3.20.20.100 1 302 2.6E-100 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DA442_02015 b8cd1c565140cac86eb4168749dd12fc 431 Pfam PF00589 Phage integrase family 228 388 3.5E-11 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DA442_02015 b8cd1c565140cac86eb4168749dd12fc 431 Gene3D G3DSA:1.10.150.130 109 219 1.3E-11 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal DA442_02015 b8cd1c565140cac86eb4168749dd12fc 431 Pfam PF13356 Arm DNA-binding domain 4 90 8.5E-12 T 14-10-2018 IPR025166 Integrase, DNA-binding domain DA442_02015 b8cd1c565140cac86eb4168749dd12fc 431 Gene3D G3DSA:1.10.443.10 222 412 3.4E-15 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DA442_02015 b8cd1c565140cac86eb4168749dd12fc 431 SUPERFAMILY SSF56349 112 410 1.01E-42 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DA442_02015 b8cd1c565140cac86eb4168749dd12fc 431 Gene3D G3DSA:3.30.160.390 1 108 1.4E-14 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily DA442_12790 ebbd96ee4e09ea22ef717643c4e1ef4b 243 PIRSF PIRSF005650 4 243 6.9E-89 T 14-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 DA442_12790 ebbd96ee4e09ea22ef717643c4e1ef4b 243 Gene3D G3DSA:3.40.1160.10 3 243 3.3E-76 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DA442_12790 ebbd96ee4e09ea22ef717643c4e1ef4b 243 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 44.005 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 DA442_12790 ebbd96ee4e09ea22ef717643c4e1ef4b 243 SUPERFAMILY SSF53633 7 239 6.55E-72 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DA442_12790 ebbd96ee4e09ea22ef717643c4e1ef4b 243 Pfam PF00696 Amino acid kinase family 11 219 6.2E-27 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DA442_12790 ebbd96ee4e09ea22ef717643c4e1ef4b 243 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 3.4E-102 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 DA442_04005 b5471fede092199e18fbfe4a3ecf647c 197 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 22 191 3.8E-33 T 14-10-2018 IPR018635 Uncharacterised protein family UPF0319 DA442_04005 b5471fede092199e18fbfe4a3ecf647c 197 Hamap MF_00789 UPF0319 protein YccT [yccT]. 3 194 25.139 T 14-10-2018 IPR018635 Uncharacterised protein family UPF0319 DA442_07550 81e2f2cce0be9c924a3e5e7ef1b83162 330 Pfam PF09937 Uncharacterized protein conserved in bacteria (DUF2169) 24 302 5.5E-71 T 14-10-2018 IPR018683 Domain of unknown function DUF2169 DA442_20330 c85d5eeeacc7aa1f14d8520bf2a54653 172 Pfam PF13590 Domain of unknown function (DUF4136) 20 169 6.5E-26 T 14-10-2018 IPR025411 Domain of unknown function DUF4136 DA442_20330 c85d5eeeacc7aa1f14d8520bf2a54653 172 Gene3D G3DSA:3.30.160.670 13 171 5.7E-25 T 14-10-2018 DA442_04930 e943b32fb76547bb90bde4ae66d803ad 364 Gene3D G3DSA:1.10.287.470 94 153 9.0E-71 T 14-10-2018 DA442_04930 e943b32fb76547bb90bde4ae66d803ad 364 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 35 340 1.7E-86 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DA442_04930 e943b32fb76547bb90bde4ae66d803ad 364 Gene3D G3DSA:2.40.30.170 47 269 9.0E-71 T 14-10-2018 DA442_04930 e943b32fb76547bb90bde4ae66d803ad 364 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 45 259 6.3E-29 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DA442_04930 e943b32fb76547bb90bde4ae66d803ad 364 SUPERFAMILY SSF111369 49 264 6.54E-39 T 14-10-2018 DA442_04930 e943b32fb76547bb90bde4ae66d803ad 364 Gene3D G3DSA:2.40.50.100 59 187 9.0E-71 T 14-10-2018 DA442_04930 e943b32fb76547bb90bde4ae66d803ad 364 Gene3D G3DSA:2.40.420.20 270 338 9.0E-71 T 14-10-2018 DA442_22980 15ca346a8eb3ec1e2807acac7ce8bcd4 249 SUPERFAMILY SSF69118 36 247 1.1E-46 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DA442_22980 15ca346a8eb3ec1e2807acac7ce8bcd4 249 Pfam PF02627 Carboxymuconolactone decarboxylase family 158 241 1.2E-11 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 DA442_22980 15ca346a8eb3ec1e2807acac7ce8bcd4 249 Pfam PF02627 Carboxymuconolactone decarboxylase family 37 104 1.9E-10 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 DA442_22980 15ca346a8eb3ec1e2807acac7ce8bcd4 249 Gene3D G3DSA:1.20.1290.10 24 249 1.4E-53 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DA442_24655 915cf3d4511d4b357eed9863a28c7553 203 Pfam PF01810 LysE type translocator 13 201 3.4E-33 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DA442_24655 915cf3d4511d4b357eed9863a28c7553 203 PIRSF PIRSF006324 1 203 2.0E-50 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DA442_05230 d926059c87db92af22a1db4ab582fe68 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 241 4.1E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DA442_05230 d926059c87db92af22a1db4ab582fe68 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 73 1.6E-15 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DA442_05230 d926059c87db92af22a1db4ab582fe68 246 Gene3D G3DSA:1.10.3720.10 3 243 9.4E-50 T 14-10-2018 IPR035906 MetI-like superfamily DA442_05230 d926059c87db92af22a1db4ab582fe68 246 SUPERFAMILY SSF161098 11 233 4.06E-40 T 14-10-2018 IPR035906 MetI-like superfamily DA442_05655 3a01cf90d50a883bdeb7a20ea620c063 256 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 10 252 9.0E-121 T 14-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 DA442_05655 3a01cf90d50a883bdeb7a20ea620c063 256 Gene3D G3DSA:1.20.1260.10 96 256 3.5E-56 T 14-10-2018 IPR012347 Ferritin-like DA442_05655 3a01cf90d50a883bdeb7a20ea620c063 256 Gene3D G3DSA:1.20.1260.10 7 76 9.7E-17 T 14-10-2018 IPR012347 Ferritin-like DA442_05655 3a01cf90d50a883bdeb7a20ea620c063 256 SUPERFAMILY SSF47240 11 255 1.49E-74 T 14-10-2018 IPR009078 Ferritin-like superfamily DA442_05655 3a01cf90d50a883bdeb7a20ea620c063 256 PIRSF PIRSF020736 2 256 8.0E-93 T 14-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 DA442_06025 c876ee75fd892a0aef41b1172d2fd6fc 223 Pfam PF04012 PspA/IM30 family 2 217 8.2E-61 T 14-10-2018 IPR007157 PspA/IM30 DA442_06025 c876ee75fd892a0aef41b1172d2fd6fc 223 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 219 3.0E-94 T 14-10-2018 IPR014319 Phage shock protein, PspA DA442_09115 150093a95460e54ab48e6a18df344426 475 Gene3D G3DSA:1.20.1740.10 8 472 7.6E-42 T 14-10-2018 DA442_09115 150093a95460e54ab48e6a18df344426 475 Pfam PF13520 Amino acid permease 11 448 8.7E-53 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DA442_09115 150093a95460e54ab48e6a18df344426 475 PIRSF PIRSF006060 8 472 1.8E-54 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DA442_01075 930510ed19390810b22b04a070df4ae8 135 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 82 93 - T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 DA442_01075 930510ed19390810b22b04a070df4ae8 135 Pfam PF01219 Prokaryotic diacylglycerol kinase 28 129 2.7E-33 T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 DA442_01075 930510ed19390810b22b04a070df4ae8 135 Gene3D G3DSA:1.10.3830.10 15 133 3.6E-39 T 14-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 DA442_10300 af215a11812afbd393abb71664fd69a3 40 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 1.0E-15 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_22795 65381c6975b6c7f6b294e6fd85b7f4e7 498 Gene3D G3DSA:3.40.50.10940 2 176 4.7E-80 T 14-10-2018 IPR038583 L-arabinose isomerase, N-terminal domain superfamily KEGG: 00040+5.3.1.4 DA442_22795 65381c6975b6c7f6b294e6fd85b7f4e7 498 Hamap MF_00519 L-arabinose isomerase [araA]. 2 476 62.985 T 14-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 DA442_22795 65381c6975b6c7f6b294e6fd85b7f4e7 498 SUPERFAMILY SSF50443 330 497 1.07E-66 T 14-10-2018 IPR004216 L-fucose/L-arabinose isomerase, C-terminal DA442_22795 65381c6975b6c7f6b294e6fd85b7f4e7 498 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 2 305 4.0E-180 T 14-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 DA442_22795 65381c6975b6c7f6b294e6fd85b7f4e7 498 Pfam PF11762 L-arabinose isomerase C-terminal domain 362 475 8.9E-46 T 14-10-2018 IPR024664 L-arabinose isomerase, C-terminal KEGG: 00040+5.3.1.4 DA442_22795 65381c6975b6c7f6b294e6fd85b7f4e7 498 PIRSF PIRSF001478 2 498 1.4E-248 T 14-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 DA442_22795 65381c6975b6c7f6b294e6fd85b7f4e7 498 Pfam PF02610 L-arabinose isomerase 6 359 3.7E-170 T 14-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 DA442_22795 65381c6975b6c7f6b294e6fd85b7f4e7 498 SUPERFAMILY SSF53743 2 328 3.14E-120 T 14-10-2018 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily GO:0005737|GO:0005996|GO:0016861 DA442_10340 cee2f6cca19a704c1fdfddb450155cf3 165 Gene3D G3DSA:1.20.120.450 1 157 1.2E-22 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DA442_10340 cee2f6cca19a704c1fdfddb450155cf3 165 Pfam PF05163 DinB family 4 156 2.0E-14 T 14-10-2018 IPR007837 DNA damage-inducible protein DinB DA442_10340 cee2f6cca19a704c1fdfddb450155cf3 165 SUPERFAMILY SSF109854 6 153 5.13E-26 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DA442_19475 34bfc24bf17442d0945d1a2ee38a979e 122 Pfam PF10719 Late competence development protein ComFB 8 85 1.5E-16 T 14-10-2018 IPR019657 Late competence development protein ComFB DA442_16790 f6067a6127dc815415899a54ef82f372 280 SUPERFAMILY SSF144091 96 271 4.45E-40 T 14-10-2018 DA442_16790 f6067a6127dc815415899a54ef82f372 280 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 87 1.8E-34 T 14-10-2018 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 DA442_16790 f6067a6127dc815415899a54ef82f372 280 Gene3D G3DSA:1.20.1540.10 90 279 7.6E-53 T 14-10-2018 IPR035952 Rhomboid-like superfamily DA442_16790 f6067a6127dc815415899a54ef82f372 280 Pfam PF01694 Rhomboid family 134 271 5.1E-31 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 DA442_16790 f6067a6127dc815415899a54ef82f372 280 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 3 271 2.1E-116 T 14-10-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 DA442_16790 f6067a6127dc815415899a54ef82f372 280 Gene3D G3DSA:3.30.70.2350 1 69 2.9E-25 T 14-10-2018 IPR038236 GlpG peptidase, N-terminal domain superfamily DA442_12080 64c2fd2fad0ef404856ca911a187fa18 109 SUPERFAMILY SSF82607 11 103 1.01E-36 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily DA442_12080 64c2fd2fad0ef404856ca911a187fa18 109 PIRSF PIRSF004555 3 109 1.2E-40 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family DA442_12080 64c2fd2fad0ef404856ca911a187fa18 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 23.43 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family DA442_12080 64c2fd2fad0ef404856ca911a187fa18 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 3.4E-40 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family DA442_12080 64c2fd2fad0ef404856ca911a187fa18 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 100 1.8E-35 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family DA442_12080 64c2fd2fad0ef404856ca911a187fa18 109 Gene3D G3DSA:3.30.1310.10 1 109 4.7E-48 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily DA442_12670 7a99384c479860c4f47604887ec79df2 416 TIGRFAM TIGR03503 TIGR03503: TIGR03503 family protein 24 400 6.3E-137 T 14-10-2018 IPR020010 Conserved hypothetical protein CHP03503 DA442_19700 7d80da00a6285a63ed5432eb6bc10ff4 60 Pfam PF11661 Protein of unknown function (DUF2986) 1 43 4.4E-21 T 14-10-2018 IPR021677 Protein of unknown function DUF2986 DA442_24065 a4ea2cfac0f5487ac06b3eb3b081307c 306 PIRSF PIRSF036979 13 304 1.1E-97 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 DA442_24065 a4ea2cfac0f5487ac06b3eb3b081307c 306 Gene3D G3DSA:3.40.800.10 1 305 2.0E-105 T 14-10-2018 DA442_24065 a4ea2cfac0f5487ac06b3eb3b081307c 306 ProSitePatterns PS01053 Arginase family signature. 229 250 - T 14-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 DA442_24065 a4ea2cfac0f5487ac06b3eb3b081307c 306 SUPERFAMILY SSF52768 12 303 1.13E-95 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily DA442_24065 a4ea2cfac0f5487ac06b3eb3b081307c 306 TIGRFAM TIGR01230 agmatinase: agmatinase 25 299 1.0E-93 T 14-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 DA442_24065 a4ea2cfac0f5487ac06b3eb3b081307c 306 Pfam PF00491 Arginase family 33 298 1.7E-90 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 DA442_00050 bd8b396d9ec5b61f76813086fd71cb5c 694 PIRSF PIRSF036917 1 694 0.0 T 14-10-2018 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 DA442_00050 bd8b396d9ec5b61f76813086fd71cb5c 694 SUPERFAMILY SSF51445 189 665 6.6E-79 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DA442_00050 bd8b396d9ec5b61f76813086fd71cb5c 694 Pfam PF00128 Alpha amylase, catalytic domain 236 614 2.5E-38 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DA442_00050 bd8b396d9ec5b61f76813086fd71cb5c 694 SMART SM00642 203 656 5.4E-78 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DA442_00050 bd8b396d9ec5b61f76813086fd71cb5c 694 Gene3D G3DSA:3.20.20.80 192 660 3.2E-81 T 14-10-2018 DA442_08190 d7132947131296112d420d39a0e70f71 355 Pfam PF13416 Bacterial extracellular solute-binding protein 54 312 4.2E-37 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein DA442_08190 d7132947131296112d420d39a0e70f71 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 103 116 7.0E-69 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DA442_08190 d7132947131296112d420d39a0e70f71 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 215 234 7.0E-69 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DA442_08190 d7132947131296112d420d39a0e70f71 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 87 101 7.0E-69 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DA442_08190 d7132947131296112d420d39a0e70f71 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 134 150 7.0E-69 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DA442_08190 d7132947131296112d420d39a0e70f71 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 160 174 7.0E-69 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DA442_08190 d7132947131296112d420d39a0e70f71 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 60 81 7.0E-69 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DA442_08190 d7132947131296112d420d39a0e70f71 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 44 60 7.0E-69 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DA442_08190 d7132947131296112d420d39a0e70f71 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 259 278 7.0E-69 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DA442_08190 d7132947131296112d420d39a0e70f71 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 178 197 7.0E-69 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DA442_08190 d7132947131296112d420d39a0e70f71 355 Gene3D G3DSA:3.40.190.10 144 347 1.7E-106 T 14-10-2018 DA442_08190 d7132947131296112d420d39a0e70f71 355 Gene3D G3DSA:3.40.190.10 44 318 1.7E-106 T 14-10-2018 DA442_08190 d7132947131296112d420d39a0e70f71 355 PIRSF PIRSF019574 12 355 1.2E-108 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DA442_08190 d7132947131296112d420d39a0e70f71 355 SUPERFAMILY SSF53850 38 352 2.72E-84 T 14-10-2018 DA442_00090 149dded806330fac3357866738fae25b 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 88 1.8E-5 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DA442_00090 149dded806330fac3357866738fae25b 326 Pfam PF00107 Zinc-binding dehydrogenase 159 272 1.0E-10 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DA442_00090 149dded806330fac3357866738fae25b 326 SMART SM00829 13 324 3.4E-5 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DA442_00090 149dded806330fac3357866738fae25b 326 Gene3D G3DSA:3.90.180.10 17 325 6.6E-124 T 14-10-2018 DA442_00090 149dded806330fac3357866738fae25b 326 Gene3D G3DSA:3.40.50.720 126 294 6.6E-124 T 14-10-2018 DA442_00090 149dded806330fac3357866738fae25b 326 SUPERFAMILY SSF50129 2 145 5.33E-45 T 14-10-2018 IPR011032 GroES-like superfamily DA442_00090 149dded806330fac3357866738fae25b 326 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 3 326 1.5E-139 T 14-10-2018 IPR014188 Acrylyl-CoA reductase AcuI DA442_00090 149dded806330fac3357866738fae25b 326 SUPERFAMILY SSF51735 116 289 1.66E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_11405 adae645ee1589561c3ed4bd5f9487c7e 467 SUPERFAMILY SSF56672 11 225 1.51E-33 T 14-10-2018 DA442_11405 adae645ee1589561c3ed4bd5f9487c7e 467 Gene3D G3DSA:1.10.150.20 167 207 4.5E-9 T 14-10-2018 DA442_11405 adae645ee1589561c3ed4bd5f9487c7e 467 Pfam PF00817 impB/mucB/samB family 23 146 8.1E-9 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DA442_11405 adae645ee1589561c3ed4bd5f9487c7e 467 Gene3D G3DSA:3.30.70.270 69 166 4.5E-9 T 14-10-2018 DA442_11405 adae645ee1589561c3ed4bd5f9487c7e 467 Gene3D G3DSA:2.30.40.20 24 68 4.5E-9 T 14-10-2018 DA442_12355 140947e3a88ad4ecea619298cd74719c 122 Gene3D G3DSA:3.40.50.2300 1 122 7.4E-40 T 14-10-2018 DA442_12355 140947e3a88ad4ecea619298cd74719c 122 SMART SM00448 1 115 1.6E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_12355 140947e3a88ad4ecea619298cd74719c 122 SUPERFAMILY SSF52172 1 121 9.25E-38 T 14-10-2018 IPR011006 CheY-like superfamily DA442_12355 140947e3a88ad4ecea619298cd74719c 122 Pfam PF00072 Response regulator receiver domain 3 115 1.8E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_02565 8d4176fd345917e8811a49356454768b 226 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 5 214 9.4E-88 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DA442_02565 8d4176fd345917e8811a49356454768b 226 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 14-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DA442_02565 8d4176fd345917e8811a49356454768b 226 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.393 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DA442_02565 8d4176fd345917e8811a49356454768b 226 Pfam PF03167 Uracil DNA glycosylase superfamily 54 209 7.5E-26 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DA442_02565 8d4176fd345917e8811a49356454768b 226 SMART SM00986 49 210 5.5E-40 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DA442_02565 8d4176fd345917e8811a49356454768b 226 Gene3D G3DSA:3.40.470.10 1 225 1.3E-105 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DA442_02565 8d4176fd345917e8811a49356454768b 226 SMART SM00987 49 210 5.5E-40 T 14-10-2018 DA442_02565 8d4176fd345917e8811a49356454768b 226 SUPERFAMILY SSF52141 4 222 6.35E-97 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DA442_03750 42a54f597a8cd663ff1ec9cbad717ad8 365 SUPERFAMILY SSF52540 119 320 9.27E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_03750 42a54f597a8cd663ff1ec9cbad717ad8 365 Pfam PF02562 PhoH-like protein 120 323 4.0E-94 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 DA442_03750 42a54f597a8cd663ff1ec9cbad717ad8 365 Gene3D G3DSA:3.40.50.300 117 323 4.3E-73 T 14-10-2018 DA442_09600 c94142156c79a83989ab2170f5fe036f 42 Pfam PF11665 Protein of unknown function (DUF3265) 11 38 9.8E-9 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_06510 08f901193a469fc46c4f56e06612fcd1 230 SUPERFAMILY SSF103039 14 177 3.4E-24 T 14-10-2018 IPR028976 CheC-like superfamily DA442_06510 08f901193a469fc46c4f56e06612fcd1 230 Gene3D G3DSA:3.40.1550.10 11 177 1.6E-20 T 14-10-2018 IPR028976 CheC-like superfamily DA442_06510 08f901193a469fc46c4f56e06612fcd1 230 Pfam PF11813 Protein of unknown function (DUF3334) 7 230 1.4E-117 T 14-10-2018 IPR024513 Protein of unknown function DUF3334 DA442_01045 3fd77fd9c60bcf174ceeeae8df46e2bb 269 Gene3D G3DSA:3.20.190.10 2 128 6.3E-41 T 14-10-2018 IPR035937 MutM-like, N-terminal DA442_01045 3fd77fd9c60bcf174ceeeae8df46e2bb 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 269 1.0E-8 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 DA442_01045 3fd77fd9c60bcf174ceeeae8df46e2bb 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 43.231 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 DA442_01045 3fd77fd9c60bcf174ceeeae8df46e2bb 269 SUPERFAMILY SSF46946 130 221 5.36E-30 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 DA442_01045 3fd77fd9c60bcf174ceeeae8df46e2bb 269 SUPERFAMILY SSF57716 217 268 1.31E-16 T 14-10-2018 DA442_01045 3fd77fd9c60bcf174ceeeae8df46e2bb 269 SMART SM00898 2 115 3.0E-53 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 DA442_01045 3fd77fd9c60bcf174ceeeae8df46e2bb 269 SMART SM01232 129 221 7.2E-45 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 DA442_01045 3fd77fd9c60bcf174ceeeae8df46e2bb 269 Gene3D G3DSA:1.10.8.50 131 269 4.1E-47 T 14-10-2018 DA442_01045 3fd77fd9c60bcf174ceeeae8df46e2bb 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 6.4E-27 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 DA442_01045 3fd77fd9c60bcf174ceeeae8df46e2bb 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 4.0E-95 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 DA442_01045 3fd77fd9c60bcf174ceeeae8df46e2bb 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 14-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 DA442_01045 3fd77fd9c60bcf174ceeeae8df46e2bb 269 SUPERFAMILY SSF81624 2 138 7.46E-41 T 14-10-2018 IPR035937 MutM-like, N-terminal DA442_01045 3fd77fd9c60bcf174ceeeae8df46e2bb 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 5.7E-31 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 DA442_08660 759d597031a0d6a7aa5d3b5a9a646949 323 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 5 320 1.1E-121 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family DA442_08660 759d597031a0d6a7aa5d3b5a9a646949 323 Pfam PF16868 NMT1-like family 31 320 1.9E-97 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family DA442_08660 759d597031a0d6a7aa5d3b5a9a646949 323 SUPERFAMILY SSF53850 27 322 2.9E-91 T 14-10-2018 DA442_08660 759d597031a0d6a7aa5d3b5a9a646949 323 Gene3D G3DSA:3.40.190.10 31 320 4.2E-109 T 14-10-2018 DA442_08660 759d597031a0d6a7aa5d3b5a9a646949 323 Gene3D G3DSA:3.40.190.10 118 256 4.2E-109 T 14-10-2018 DA442_00370 8405d7b463f482756174ac55b941a9dd 680 Gene3D G3DSA:1.10.1370.10 140 610 2.4E-271 T 14-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 DA442_00370 8405d7b463f482756174ac55b941a9dd 680 SUPERFAMILY SSF55486 1 677 8.91E-214 T 14-10-2018 DA442_00370 8405d7b463f482756174ac55b941a9dd 680 Gene3D G3DSA:1.10.1370.40 13 675 2.4E-271 T 14-10-2018 DA442_00370 8405d7b463f482756174ac55b941a9dd 680 Pfam PF01432 Peptidase family M3 222 677 6.5E-165 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 DA442_06685 072ce92a3bcef07d28e50aba383c2aaf 231 Gene3D G3DSA:3.40.50.720 2 230 1.2E-50 T 14-10-2018 DA442_06685 072ce92a3bcef07d28e50aba383c2aaf 231 Pfam PF13460 NAD(P)H-binding 13 162 4.5E-10 T 14-10-2018 IPR016040 NAD(P)-binding domain DA442_06685 072ce92a3bcef07d28e50aba383c2aaf 231 SUPERFAMILY SSF51735 7 219 8.08E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_14640 adac311cb78ac87d8abc2de1e4a3ee5a 102 Pfam PF05164 Cell division protein ZapA 6 89 7.5E-20 T 14-10-2018 IPR007838 Cell division protein ZapA-like DA442_14640 adac311cb78ac87d8abc2de1e4a3ee5a 102 Gene3D G3DSA:1.10.20.30 1 47 7.0E-19 T 14-10-2018 DA442_14640 adac311cb78ac87d8abc2de1e4a3ee5a 102 SUPERFAMILY SSF102829 6 95 3.01E-24 T 14-10-2018 IPR036192 Cell division protein ZapA-like superfamily DA442_01540 a7cce014599a851da5a362b0f6ba5fe0 129 SUPERFAMILY SSF53137 14 129 6.54E-48 T 14-10-2018 DA442_01540 a7cce014599a851da5a362b0f6ba5fe0 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 32.665 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 DA442_01540 a7cce014599a851da5a362b0f6ba5fe0 129 Pfam PF00411 Ribosomal protein S11 19 128 1.5E-52 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 DA442_01540 a7cce014599a851da5a362b0f6ba5fe0 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 14-10-2018 IPR018102 Ribosomal S11, conserved site DA442_01540 a7cce014599a851da5a362b0f6ba5fe0 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 4.2E-55 T 14-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_01540 a7cce014599a851da5a362b0f6ba5fe0 129 PIRSF PIRSF002131 1 129 2.1E-52 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 DA442_01540 a7cce014599a851da5a362b0f6ba5fe0 129 Gene3D G3DSA:3.30.420.80 1 129 3.3E-57 T 14-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 DA442_22555 cdf3ce32855b020b7f56115755b46c71 98 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 20 82 2.2E-15 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 DA442_22555 cdf3ce32855b020b7f56115755b46c71 98 SUPERFAMILY SSF55604 23 95 6.15E-19 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DA442_22555 cdf3ce32855b020b7f56115755b46c71 98 Pfam PF00367 phosphotransferase system, EIIB 26 57 2.6E-10 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DA442_22555 cdf3ce32855b020b7f56115755b46c71 98 Gene3D G3DSA:3.30.1360.60 18 98 3.5E-22 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DA442_18275 bd38c647da985ee86773356bea888378 515 Gene3D G3DSA:3.40.720.10 31 397 9.2E-101 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DA442_18275 bd38c647da985ee86773356bea888378 515 Gene3D G3DSA:3.30.1120.10 398 462 9.2E-101 T 14-10-2018 DA442_18275 bd38c647da985ee86773356bea888378 515 Pfam PF00884 Sulfatase 31 356 1.1E-61 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 DA442_18275 bd38c647da985ee86773356bea888378 515 SUPERFAMILY SSF53649 27 507 2.47E-126 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DA442_18275 bd38c647da985ee86773356bea888378 515 Pfam PF14707 C-terminal region of aryl-sulfatase 396 470 1.3E-7 T 14-10-2018 DA442_19720 bf5217591a130863e8ea0972c452941c 443 PIRSF PIRSF004539 1 441 1.8E-185 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 DA442_19720 bf5217591a130863e8ea0972c452941c 443 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 373 1.6E-149 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 DA442_19720 bf5217591a130863e8ea0972c452941c 443 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 6 440 4.9E-147 T 14-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 DA442_23720 c5f188d240e55bef7021eaf087b4a45e 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 73 5.8E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_23720 c5f188d240e55bef7021eaf087b4a45e 313 SUPERFAMILY SSF53850 96 302 1.27E-23 T 14-10-2018 DA442_23720 c5f188d240e55bef7021eaf087b4a45e 313 Gene3D G3DSA:1.10.10.10 5 93 5.5E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_23720 c5f188d240e55bef7021eaf087b4a45e 313 Pfam PF03466 LysR substrate binding domain 101 298 2.6E-12 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_23720 c5f188d240e55bef7021eaf087b4a45e 313 SUPERFAMILY SSF46785 9 92 6.22E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_23720 c5f188d240e55bef7021eaf087b4a45e 313 Gene3D G3DSA:3.40.190.10 96 300 1.1E-23 T 14-10-2018 DA442_23720 c5f188d240e55bef7021eaf087b4a45e 313 Gene3D G3DSA:3.40.190.10 177 275 1.1E-23 T 14-10-2018 DA442_09085 17ca4cb4a50bc88b59219201c5a0f831 458 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 92 107 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DA442_09085 17ca4cb4a50bc88b59219201c5a0f831 458 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 441 1.2E-152 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DA442_09085 17ca4cb4a50bc88b59219201c5a0f831 458 PRINTS PR00175 Sodium/alanine symporter signature 412 432 4.4E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DA442_09085 17ca4cb4a50bc88b59219201c5a0f831 458 PRINTS PR00175 Sodium/alanine symporter signature 184 202 4.4E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DA442_09085 17ca4cb4a50bc88b59219201c5a0f831 458 PRINTS PR00175 Sodium/alanine symporter signature 212 231 4.4E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DA442_09085 17ca4cb4a50bc88b59219201c5a0f831 458 PRINTS PR00175 Sodium/alanine symporter signature 92 114 4.4E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DA442_09085 17ca4cb4a50bc88b59219201c5a0f831 458 PRINTS PR00175 Sodium/alanine symporter signature 307 325 4.4E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DA442_09085 17ca4cb4a50bc88b59219201c5a0f831 458 PRINTS PR00175 Sodium/alanine symporter signature 353 375 4.4E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DA442_09085 17ca4cb4a50bc88b59219201c5a0f831 458 Pfam PF01235 Sodium:alanine symporter family 54 445 1.2E-137 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DA442_19290 8eaff164b2b284d2921fb57577813827 338 Gene3D G3DSA:3.40.50.720 3 273 5.9E-142 T 14-10-2018 DA442_19290 8eaff164b2b284d2921fb57577813827 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 322 2.9E-62 T 14-10-2018 IPR016040 NAD(P)-binding domain DA442_19290 8eaff164b2b284d2921fb57577813827 338 SUPERFAMILY SSF51735 1 335 2.95E-100 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_19290 8eaff164b2b284d2921fb57577813827 338 Gene3D G3DSA:3.90.25.10 193 328 5.9E-142 T 14-10-2018 DA442_19290 8eaff164b2b284d2921fb57577813827 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 334 3.0E-142 T 14-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 DA442_19290 8eaff164b2b284d2921fb57577813827 338 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 1.5E-5 T 14-10-2018 DA442_19290 8eaff164b2b284d2921fb57577813827 338 PRINTS PR01713 Nucleotide sugar epimerase signature 230 245 1.5E-5 T 14-10-2018 DA442_19290 8eaff164b2b284d2921fb57577813827 338 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 1.5E-5 T 14-10-2018 DA442_16065 a05fe7f78c469ec43bcf2de4c1c55769 354 Gene3D G3DSA:3.40.50.300 103 276 3.4E-49 T 14-10-2018 DA442_16065 a05fe7f78c469ec43bcf2de4c1c55769 354 Gene3D G3DSA:1.10.40.50 277 351 8.9E-25 T 14-10-2018 DA442_16065 a05fe7f78c469ec43bcf2de4c1c55769 354 Pfam PF03193 RsgA GTPase 100 277 1.8E-57 T 14-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 DA442_16065 a05fe7f78c469ec43bcf2de4c1c55769 354 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 41 341 37.418 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 DA442_16065 a05fe7f78c469ec43bcf2de4c1c55769 354 Gene3D G3DSA:2.40.50.140 36 102 1.2E-21 T 14-10-2018 DA442_16065 a05fe7f78c469ec43bcf2de4c1c55769 354 SUPERFAMILY SSF52540 114 337 1.6E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_16065 a05fe7f78c469ec43bcf2de4c1c55769 354 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 75 335 1.5E-90 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 DA442_11685 22c0c95d913fa971db2eeb2feb24d032 336 Gene3D G3DSA:3.40.50.300 12 336 6.7E-98 T 14-10-2018 DA442_11685 22c0c95d913fa971db2eeb2feb24d032 336 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_11685 22c0c95d913fa971db2eeb2feb24d032 336 SUPERFAMILY SSF52540 17 267 2.53E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_11685 22c0c95d913fa971db2eeb2feb24d032 336 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 247 314 9.7E-20 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DA442_11685 22c0c95d913fa971db2eeb2feb24d032 336 SMART SM00382 52 245 1.8E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_11685 22c0c95d913fa971db2eeb2feb24d032 336 Pfam PF00005 ABC transporter 44 195 1.2E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_11685 22c0c95d913fa971db2eeb2feb24d032 336 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 246 332 1.3E-26 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DA442_12205 999e71a16902dc886db2a004656314bd 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DA442_12205 999e71a16902dc886db2a004656314bd 361 Pfam PF01264 Chorismate synthase 10 345 1.3E-144 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DA442_12205 999e71a16902dc886db2a004656314bd 361 SUPERFAMILY SSF103263 4 354 2.09E-150 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DA442_12205 999e71a16902dc886db2a004656314bd 361 Gene3D G3DSA:3.60.150.10 1 361 3.0E-161 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DA442_12205 999e71a16902dc886db2a004656314bd 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.782 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DA442_12205 999e71a16902dc886db2a004656314bd 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DA442_12205 999e71a16902dc886db2a004656314bd 361 PIRSF PIRSF001456 3 360 1.7E-144 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DA442_12205 999e71a16902dc886db2a004656314bd 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DA442_12205 999e71a16902dc886db2a004656314bd 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 2.3E-144 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DA442_00955 a844d31775a05fe9b1e8efeea62dde16 729 SUPERFAMILY SSF52540 226 715 1.59E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_00955 a844d31775a05fe9b1e8efeea62dde16 729 Pfam PF01935 Domain of unknown function DUF87 206 583 9.4E-12 T 14-10-2018 IPR002789 Helicase HerA, central domain DA442_00955 a844d31775a05fe9b1e8efeea62dde16 729 Gene3D G3DSA:3.40.50.300 206 341 4.4E-10 T 14-10-2018 DA442_00955 a844d31775a05fe9b1e8efeea62dde16 729 Gene3D G3DSA:3.40.50.300 531 721 3.2E-24 T 14-10-2018 DA442_09225 29e1ab4594c908f3905017a5b5844557 317 Pfam PF01368 DHH family 16 150 2.6E-12 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DA442_09225 29e1ab4594c908f3905017a5b5844557 317 SUPERFAMILY SSF64182 12 314 2.09E-54 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily DA442_09225 29e1ab4594c908f3905017a5b5844557 317 Gene3D G3DSA:3.10.310.20 196 315 1.7E-33 T 14-10-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DA442_09225 29e1ab4594c908f3905017a5b5844557 317 SMART SM01131 187 314 2.0E-41 T 14-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DA442_09225 29e1ab4594c908f3905017a5b5844557 317 Gene3D G3DSA:3.90.1640.10 12 195 3.5E-47 T 14-10-2018 DA442_09225 29e1ab4594c908f3905017a5b5844557 317 Pfam PF02833 DHHA2 domain 189 313 2.5E-21 T 14-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DA442_15120 d2303323f0423e1f3766caf0cf953d91 212 Gene3D G3DSA:3.10.450.710 25 204 4.3E-38 T 14-10-2018 DA442_15120 d2303323f0423e1f3766caf0cf953d91 212 Pfam PF05494 MlaC protein 33 200 1.2E-45 T 14-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC DA442_15120 d2303323f0423e1f3766caf0cf953d91 212 PIRSF PIRSF004649 1 212 1.7E-56 T 14-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC DA442_12330 988952e3ecbca3b6043e5701f911900b 370 SUPERFAMILY SSF50341 224 360 9.55E-15 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 DA442_12330 988952e3ecbca3b6043e5701f911900b 370 PIRSF PIRSF020479 5 370 1.9E-151 T 14-10-2018 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like DA442_12330 988952e3ecbca3b6043e5701f911900b 370 SMART SM00260 223 357 3.4E-4 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DA442_12330 988952e3ecbca3b6043e5701f911900b 370 Pfam PF01584 CheW-like domain 227 359 9.8E-15 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DA442_04410 e5c2680aed09406fe2c49fc087cf8b12 252 Gene3D G3DSA:3.40.1390.30 14 237 1.7E-81 T 14-10-2018 DA442_04410 e5c2680aed09406fe2c49fc087cf8b12 252 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 251 8.7E-69 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 DA442_04410 e5c2680aed09406fe2c49fc087cf8b12 252 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 239 3.3E-58 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 DA442_04410 e5c2680aed09406fe2c49fc087cf8b12 252 Gene3D G3DSA:3.40.1390.30 97 223 1.7E-81 T 14-10-2018 DA442_04410 e5c2680aed09406fe2c49fc087cf8b12 252 SUPERFAMILY SSF102705 1 251 2.35E-82 T 14-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily DA442_18945 23eb9b377c6385ecb74b34818043d427 326 SUPERFAMILY SSF47413 1 58 1.29E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DA442_18945 23eb9b377c6385ecb74b34818043d427 326 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 14-10-2018 DA442_18945 23eb9b377c6385ecb74b34818043d427 326 SUPERFAMILY SSF53822 61 313 2.36E-40 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DA442_18945 23eb9b377c6385ecb74b34818043d427 326 Gene3D G3DSA:3.40.50.2300 155 326 1.0E-25 T 14-10-2018 DA442_18945 23eb9b377c6385ecb74b34818043d427 326 SMART SM00354 1 73 1.7E-26 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DA442_18945 23eb9b377c6385ecb74b34818043d427 326 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 326 2.2E-156 T 14-10-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 DA442_18945 23eb9b377c6385ecb74b34818043d427 326 Gene3D G3DSA:1.10.260.40 1 61 1.5E-26 T 14-10-2018 DA442_18945 23eb9b377c6385ecb74b34818043d427 326 Pfam PF13407 Periplasmic binding protein domain 64 258 3.4E-11 T 14-10-2018 IPR025997 Periplasmic binding protein DA442_18945 23eb9b377c6385ecb74b34818043d427 326 Gene3D G3DSA:3.40.50.2300 62 154 5.5E-21 T 14-10-2018 DA442_18945 23eb9b377c6385ecb74b34818043d427 326 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 50 1.2E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DA442_24810 acb47135adbff831fec070006a5baa6a 204 SUPERFAMILY SSF56925 21 204 5.23E-26 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DA442_24810 acb47135adbff831fec070006a5baa6a 204 Pfam PF01389 OmpA-like transmembrane domain 22 204 5.5E-23 T 14-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 DA442_24810 acb47135adbff831fec070006a5baa6a 204 Gene3D G3DSA:2.40.160.20 5 204 6.3E-39 T 14-10-2018 DA442_21090 e19770622c89e7c57b78cc9d07af91f2 232 SUPERFAMILY SSF50475 15 198 5.3E-54 T 14-10-2018 DA442_21090 e19770622c89e7c57b78cc9d07af91f2 232 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 36 176 1.6E-40 T 14-10-2018 IPR024747 Pyridoxamine 5'-phosphate oxidase-related DA442_21090 e19770622c89e7c57b78cc9d07af91f2 232 Gene3D G3DSA:2.30.110.10 15 231 3.0E-62 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 DA442_18565 a7dd9a85ca7b65f629069033b794b5c5 198 SUPERFAMILY SSF46894 129 196 8.5E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DA442_18565 a7dd9a85ca7b65f629069033b794b5c5 198 Pfam PF00072 Response regulator receiver domain 7 117 1.5E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_18565 a7dd9a85ca7b65f629069033b794b5c5 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 3.6E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_18565 a7dd9a85ca7b65f629069033b794b5c5 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 3.6E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_18565 a7dd9a85ca7b65f629069033b794b5c5 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 3.6E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_18565 a7dd9a85ca7b65f629069033b794b5c5 198 SMART SM00421 139 196 4.4E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_18565 a7dd9a85ca7b65f629069033b794b5c5 198 Gene3D G3DSA:3.40.50.2300 1 140 5.4E-27 T 14-10-2018 DA442_18565 a7dd9a85ca7b65f629069033b794b5c5 198 SMART SM00448 4 117 3.3E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_18565 a7dd9a85ca7b65f629069033b794b5c5 198 Pfam PF00196 Bacterial regulatory proteins, luxR family 141 196 2.7E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_18565 a7dd9a85ca7b65f629069033b794b5c5 198 SUPERFAMILY SSF52172 1 126 1.57E-27 T 14-10-2018 IPR011006 CheY-like superfamily DA442_18565 a7dd9a85ca7b65f629069033b794b5c5 198 Gene3D G3DSA:1.10.10.10 141 198 8.5E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_18565 a7dd9a85ca7b65f629069033b794b5c5 198 ProSitePatterns PS00622 LuxR-type HTH domain signature. 156 183 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DA442_06105 6307af222410b845d2e97ab7b2b0f6d8 553 Gene3D G3DSA:3.40.50.2030 383 551 6.0E-61 T 14-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 DA442_06105 6307af222410b845d2e97ab7b2b0f6d8 553 Gene3D G3DSA:3.40.50.2030 237 382 1.8E-63 T 14-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 DA442_06105 6307af222410b845d2e97ab7b2b0f6d8 553 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 552 20.232 T 14-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 DA442_06105 6307af222410b845d2e97ab7b2b0f6d8 553 SUPERFAMILY SSF56821 1 551 6.54E-196 T 14-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 DA442_06105 6307af222410b845d2e97ab7b2b0f6d8 553 Gene3D G3DSA:1.20.1270.20 1 143 9.2E-38 T 14-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 DA442_06105 6307af222410b845d2e97ab7b2b0f6d8 553 Gene3D G3DSA:1.20.1270.20 153 235 3.7E-29 T 14-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 DA442_06105 6307af222410b845d2e97ab7b2b0f6d8 553 Pfam PF03063 Prismane/CO dehydrogenase family 1 548 2.6E-163 T 14-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 DA442_06105 6307af222410b845d2e97ab7b2b0f6d8 553 PIRSF PIRSF000076 1 553 5.3E-245 T 14-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 DA442_06105 6307af222410b845d2e97ab7b2b0f6d8 553 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 551 3.6E-226 T 14-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 DA442_22630 33cf773cb5108345132fc8a2537f325f 269 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 67 200 4.8E-42 T 14-10-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 DA442_24675 e1e80c05c17574f317ca45117fd9a883 178 SUPERFAMILY SSF46689 3 69 1.75E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_24675 e1e80c05c17574f317ca45117fd9a883 178 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 7.2E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DA442_24675 e1e80c05c17574f317ca45117fd9a883 178 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 7.2E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DA442_24675 e1e80c05c17574f317ca45117fd9a883 178 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 54 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DA442_24675 e1e80c05c17574f317ca45117fd9a883 178 Gene3D G3DSA:1.10.357.10 1 172 5.2E-25 T 14-10-2018 DA442_24675 e1e80c05c17574f317ca45117fd9a883 178 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 56 1.6E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DA442_06090 49ff45e8476e4bd4472a8e7db5ab6966 230 TIGRFAM TIGR01621 RluA-like: pseudouridine synthase Rlu family protein, TIGR01621 1 220 3.6E-108 T 14-10-2018 IPR006508 Pseudouridine synthase, RluA-like DA442_06090 49ff45e8476e4bd4472a8e7db5ab6966 230 Gene3D G3DSA:3.30.2350.10 1 196 9.2E-49 T 14-10-2018 DA442_06090 49ff45e8476e4bd4472a8e7db5ab6966 230 Pfam PF00849 RNA pseudouridylate synthase 10 153 4.1E-27 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_06090 49ff45e8476e4bd4472a8e7db5ab6966 230 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 47 61 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_06090 49ff45e8476e4bd4472a8e7db5ab6966 230 SUPERFAMILY SSF55120 2 198 2.56E-47 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_01745 0d702783a31d0e3e973811823b4b61aa 322 Gene3D G3DSA:3.40.190.10 117 255 7.9E-111 T 14-10-2018 DA442_01745 0d702783a31d0e3e973811823b4b61aa 322 Pfam PF16868 NMT1-like family 30 319 2.2E-96 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family DA442_01745 0d702783a31d0e3e973811823b4b61aa 322 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 7 319 2.6E-113 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family DA442_01745 0d702783a31d0e3e973811823b4b61aa 322 Gene3D G3DSA:3.40.190.10 30 319 7.9E-111 T 14-10-2018 DA442_01745 0d702783a31d0e3e973811823b4b61aa 322 SUPERFAMILY SSF53850 25 321 2.65E-88 T 14-10-2018 DA442_22720 eff82da8d330e24db437444cc4c8461f 401 Gene3D G3DSA:1.20.1250.20 2 386 2.1E-39 T 14-10-2018 DA442_22720 eff82da8d330e24db437444cc4c8461f 401 Pfam PF07690 Major Facilitator Superfamily 8 265 5.6E-20 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DA442_22720 eff82da8d330e24db437444cc4c8461f 401 SUPERFAMILY SSF103473 5 386 3.4E-43 T 14-10-2018 IPR036259 MFS transporter superfamily DA442_17410 54e9d68dc2194d6b05c0ca53be3280b5 94 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 3 73 1.0E-4 T 14-10-2018 DA442_17410 54e9d68dc2194d6b05c0ca53be3280b5 94 Pfam PF13710 ACT domain 12 73 3.1E-21 T 14-10-2018 DA442_17410 54e9d68dc2194d6b05c0ca53be3280b5 94 Gene3D G3DSA:3.30.70.260 1 89 1.3E-12 T 14-10-2018 DA442_17410 54e9d68dc2194d6b05c0ca53be3280b5 94 SUPERFAMILY SSF55021 3 76 1.21E-11 T 14-10-2018 DA442_05490 3cd22e08fd674eb53e4dbf06352a574e 35 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 30 1.1E-20 T 14-10-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 DA442_05490 3cd22e08fd674eb53e4dbf06352a574e 35 Pfam PF08173 Membrane bound YbgT-like protein 1 27 1.3E-17 T 14-10-2018 IPR012994 Membrane bound YbgT-like DA442_19940 823653ec75cdee8557800ca27d7e9bec 175 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 157 2.7E-15 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DA442_19940 823653ec75cdee8557800ca27d7e9bec 175 SUPERFAMILY SSF53254 1 160 1.8E-20 T 14-10-2018 IPR029033 Histidine phosphatase superfamily DA442_19940 823653ec75cdee8557800ca27d7e9bec 175 Gene3D G3DSA:3.40.50.1240 1 173 4.1E-20 T 14-10-2018 IPR029033 Histidine phosphatase superfamily DA442_22445 1de9c4127e42a433594ffbbb75fb5d5a 102 Gene3D G3DSA:3.30.70.100 1 102 2.2E-41 T 14-10-2018 DA442_22445 1de9c4127e42a433594ffbbb75fb5d5a 102 SUPERFAMILY SSF54909 3 96 6.43E-34 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel DA442_22445 1de9c4127e42a433594ffbbb75fb5d5a 102 Pfam PF08803 Putative mono-oxygenase ydhR 4 99 2.8E-41 T 14-10-2018 IPR014910 Putative monooxygenase YdhR DA442_20970 d5e351807ab5c514f66f49c25916dab6 313 SUPERFAMILY SSF103481 217 294 4.32E-11 T 14-10-2018 DA442_20970 d5e351807ab5c514f66f49c25916dab6 313 Pfam PF00892 EamA-like transporter family 156 294 2.6E-12 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DA442_20970 d5e351807ab5c514f66f49c25916dab6 313 Pfam PF00892 EamA-like transporter family 8 141 3.7E-8 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DA442_20970 d5e351807ab5c514f66f49c25916dab6 313 SUPERFAMILY SSF103481 44 144 4.97E-9 T 14-10-2018 DA442_22275 1091e2ce53641b91ddc21f6605b36c41 151 Pfam PF00583 Acetyltransferase (GNAT) family 32 129 8.5E-15 T 14-10-2018 IPR000182 GNAT domain DA442_22275 1091e2ce53641b91ddc21f6605b36c41 151 Gene3D G3DSA:3.40.630.30 1 151 1.6E-42 T 14-10-2018 DA442_22275 1091e2ce53641b91ddc21f6605b36c41 151 SUPERFAMILY SSF55729 1 150 8.75E-28 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_16470 949299f4909427106130255e379ea98e 447 PIRSF PIRSF006060 1 446 1.2E-50 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DA442_16470 949299f4909427106130255e379ea98e 447 Pfam PF13520 Amino acid permease 8 421 1.4E-36 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DA442_16470 949299f4909427106130255e379ea98e 447 Gene3D G3DSA:1.20.1740.10 1 440 4.1E-58 T 14-10-2018 DA442_01305 ace7d4a0045619b98af17820b039cbc5 300 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 216 9.1E-29 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DA442_01305 ace7d4a0045619b98af17820b039cbc5 300 SUPERFAMILY SSF51735 1 296 5.95E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_01305 ace7d4a0045619b98af17820b039cbc5 300 Gene3D G3DSA:3.40.50.720 1 283 5.7E-55 T 14-10-2018 DA442_19380 0c862438f2cc8e0ddeb4b49330c2ba3b 380 Pfam PF05707 Zonular occludens toxin (Zot) 1 193 2.6E-33 T 14-10-2018 IPR008900 Zona occludens toxin DA442_19380 0c862438f2cc8e0ddeb4b49330c2ba3b 380 SUPERFAMILY SSF52540 4 141 8.8E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_19380 0c862438f2cc8e0ddeb4b49330c2ba3b 380 Gene3D G3DSA:3.40.50.300 1 194 2.9E-43 T 14-10-2018 DA442_17390 ec4d9f54407125633c0414aa714d94a5 292 SMART SM00563 85 227 2.5E-19 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DA442_17390 ec4d9f54407125633c0414aa714d94a5 292 SUPERFAMILY SSF69593 52 289 6.28E-27 T 14-10-2018 DA442_17390 ec4d9f54407125633c0414aa714d94a5 292 Pfam PF01553 Acyltransferase 72 226 9.6E-17 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DA442_23210 84de50e519faa07bfd0c77a4563c5af6 310 SMART SM00382 39 233 7.1E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_23210 84de50e519faa07bfd0c77a4563c5af6 310 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_23210 84de50e519faa07bfd0c77a4563c5af6 310 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 265 3.7E-8 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DA442_23210 84de50e519faa07bfd0c77a4563c5af6 310 Pfam PF00005 ABC transporter 30 184 6.4E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_23210 84de50e519faa07bfd0c77a4563c5af6 310 Gene3D G3DSA:3.40.50.300 3 307 1.3E-79 T 14-10-2018 DA442_23210 84de50e519faa07bfd0c77a4563c5af6 310 SUPERFAMILY SSF52540 5 254 1.9E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_01065 85e08c7580c021694aeeba7c2e9871b6 255 Gene3D G3DSA:3.90.550.10 2 190 2.8E-22 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DA442_01065 85e08c7580c021694aeeba7c2e9871b6 255 SUPERFAMILY SSF53448 3 145 5.34E-24 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DA442_01065 85e08c7580c021694aeeba7c2e9871b6 255 Pfam PF00535 Glycosyl transferase family 2 11 116 6.9E-18 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DA442_07700 6ac8253db4e9d999d319137b4fdff972 374 Gene3D G3DSA:1.10.3210.10 156 368 4.3E-33 T 14-10-2018 DA442_07700 6ac8253db4e9d999d319137b4fdff972 374 Pfam PF13487 HD domain 273 304 4.3E-9 T 14-10-2018 DA442_07700 6ac8253db4e9d999d319137b4fdff972 374 SUPERFAMILY SSF109604 174 352 8.85E-14 T 14-10-2018 DA442_07700 6ac8253db4e9d999d319137b4fdff972 374 SUPERFAMILY SSF55781 13 138 6.67E-6 T 14-10-2018 DA442_03275 22f7278e413af4aed51eb48f17348b20 476 Pfam PF03553 Na+/H+ antiporter family 37 234 2.7E-12 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 DA442_02930 e83f80bf7eb0e0d62336ed8f693e6f96 84 Gene3D G3DSA:3.30.70.20 2 83 5.9E-34 T 14-10-2018 DA442_02930 e83f80bf7eb0e0d62336ed8f693e6f96 84 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DA442_02930 e83f80bf7eb0e0d62336ed8f693e6f96 84 SUPERFAMILY SSF54862 4 72 5.59E-17 T 14-10-2018 DA442_02930 e83f80bf7eb0e0d62336ed8f693e6f96 84 Pfam PF00037 4Fe-4S binding domain 5 25 6.6E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DA442_05165 2c3e34cb46a135cc460489f255213046 423 Pfam PF04285 Protein of unknown function (DUF444) 3 421 1.5E-187 T 14-10-2018 IPR006698 Uncharacterised protein family UPF0229 DA442_05165 2c3e34cb46a135cc460489f255213046 423 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 423 40.551 T 14-10-2018 IPR006698 Uncharacterised protein family UPF0229 DA442_08345 0cafcb1f2facdf6640f00668042accbf 80 Pfam PF05768 Glutaredoxin-like domain (DUF836) 2 72 5.7E-20 T 14-10-2018 IPR008554 Glutaredoxin-like DA442_08345 0cafcb1f2facdf6640f00668042accbf 80 SUPERFAMILY SSF52833 1 74 1.71E-14 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_08345 0cafcb1f2facdf6640f00668042accbf 80 Gene3D G3DSA:3.40.30.10 1 80 3.3E-21 T 14-10-2018 DA442_15560 063f2a64976f1cdb0f17bf118c512081 254 Pfam PF04338 Protein of unknown function, DUF481 39 254 3.6E-53 T 14-10-2018 IPR007433 Protein of unknown function DUF481 DA442_15560 063f2a64976f1cdb0f17bf118c512081 254 SUPERFAMILY SSF56935 36 208 6.92E-5 T 14-10-2018 DA442_24295 18b246b11e49013af7fef19d947a69fb 228 Pfam PF13280 WYL domain 140 226 2.4E-18 T 14-10-2018 IPR026881 WYL domain DA442_24295 18b246b11e49013af7fef19d947a69fb 228 Gene3D G3DSA:1.10.10.10 1 64 1.1E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_24295 18b246b11e49013af7fef19d947a69fb 228 Pfam PF08279 HTH domain 6 59 1.8E-18 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 DA442_24295 18b246b11e49013af7fef19d947a69fb 228 SUPERFAMILY SSF46785 1 61 3.29E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_24530 069062a4ef8189797fb7bb39fba55af1 145 Gene3D G3DSA:1.20.58.300 6 137 2.2E-22 T 14-10-2018 DA442_24530 069062a4ef8189797fb7bb39fba55af1 145 SUPERFAMILY SSF140566 9 136 1.7E-29 T 14-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 DA442_24530 069062a4ef8189797fb7bb39fba55af1 145 Pfam PF05130 FlgN protein 8 134 4.0E-17 T 14-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 DA442_05440 4b237cfd34aa1319676b5171b225a138 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 12 321 1.5E-147 T 14-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 DA442_05440 4b237cfd34aa1319676b5171b225a138 323 Gene3D G3DSA:3.40.50.150 62 293 1.4E-21 T 14-10-2018 DA442_05440 4b237cfd34aa1319676b5171b225a138 323 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 13 322 54.515 T 14-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 DA442_05440 4b237cfd34aa1319676b5171b225a138 323 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 4.8E-173 T 14-10-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like DA442_05440 4b237cfd34aa1319676b5171b225a138 323 SUPERFAMILY SSF53335 91 323 2.09E-33 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_00645 f2d417bb2d68ed2952a06d4e53f8066f 180 SUPERFAMILY SSF52540 3 171 1.85E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_00645 f2d417bb2d68ed2952a06d4e53f8066f 180 Pfam PF13521 AAA domain 4 164 5.4E-40 T 14-10-2018 IPR038727 NadR/Ttd14, AAA domain DA442_00645 f2d417bb2d68ed2952a06d4e53f8066f 180 Gene3D G3DSA:3.40.50.300 1 168 4.1E-8 T 14-10-2018 DA442_00770 1594084e3d31316d747e68797cd08434 261 SUPERFAMILY SSF53474 9 258 2.01E-49 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_00770 1594084e3d31316d747e68797cd08434 261 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 11 260 44.776 T 14-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 DA442_00770 1594084e3d31316d747e68797cd08434 261 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 17 259 5.2E-102 T 14-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 DA442_00770 1594084e3d31316d747e68797cd08434 261 Gene3D G3DSA:3.40.50.1820 6 260 1.9E-65 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_00770 1594084e3d31316d747e68797cd08434 261 Pfam PF00561 alpha/beta hydrolase fold 22 247 1.1E-22 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DA442_25060 f99f427a1a8193263feec43fe69e5961 344 Pfam PF13416 Bacterial extracellular solute-binding protein 40 307 1.1E-37 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein DA442_25060 f99f427a1a8193263feec43fe69e5961 344 PIRSF PIRSF019574 2 344 1.3E-107 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DA442_25060 f99f427a1a8193263feec43fe69e5961 344 Gene3D G3DSA:3.40.190.10 27 308 7.8E-107 T 14-10-2018 DA442_25060 f99f427a1a8193263feec43fe69e5961 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 289 315 2.0E-64 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DA442_25060 f99f427a1a8193263feec43fe69e5961 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 45 66 2.0E-64 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DA442_25060 f99f427a1a8193263feec43fe69e5961 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 89 102 2.0E-64 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DA442_25060 f99f427a1a8193263feec43fe69e5961 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 200 219 2.0E-64 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DA442_25060 f99f427a1a8193263feec43fe69e5961 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 120 136 2.0E-64 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DA442_25060 f99f427a1a8193263feec43fe69e5961 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 145 159 2.0E-64 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DA442_25060 f99f427a1a8193263feec43fe69e5961 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 244 263 2.0E-64 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DA442_25060 f99f427a1a8193263feec43fe69e5961 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 29 45 2.0E-64 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DA442_25060 f99f427a1a8193263feec43fe69e5961 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 163 182 2.0E-64 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DA442_25060 f99f427a1a8193263feec43fe69e5961 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 73 87 2.0E-64 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DA442_25060 f99f427a1a8193263feec43fe69e5961 344 Gene3D G3DSA:3.40.190.10 130 338 7.8E-107 T 14-10-2018 DA442_25060 f99f427a1a8193263feec43fe69e5961 344 SUPERFAMILY SSF53850 24 341 4.39E-87 T 14-10-2018 DA442_22145 37887b0606e65146743c67598c915809 123 PRINTS PR00956 Flagellar motor switch protein FliN signature 90 105 4.2E-17 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 DA442_22145 37887b0606e65146743c67598c915809 123 PRINTS PR00956 Flagellar motor switch protein FliN signature 44 60 4.2E-17 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 DA442_22145 37887b0606e65146743c67598c915809 123 PRINTS PR00956 Flagellar motor switch protein FliN signature 61 77 4.2E-17 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 DA442_22145 37887b0606e65146743c67598c915809 123 PRINTS PR00956 Flagellar motor switch protein FliN signature 77 90 4.2E-17 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 DA442_22145 37887b0606e65146743c67598c915809 123 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 46 113 1.1E-19 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) DA442_22145 37887b0606e65146743c67598c915809 123 Gene3D G3DSA:2.30.330.10 30 119 5.1E-23 T 14-10-2018 IPR036429 SpoA-like superfamily DA442_22145 37887b0606e65146743c67598c915809 123 SUPERFAMILY SSF101801 41 116 4.05E-19 T 14-10-2018 IPR036429 SpoA-like superfamily DA442_22145 37887b0606e65146743c67598c915809 123 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 42 116 8.0E-29 T 14-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 DA442_09765 ba75c0ae39448fd412b2cd9f9f64b723 173 Gene3D G3DSA:3.40.630.30 1 161 2.6E-20 T 14-10-2018 DA442_09765 ba75c0ae39448fd412b2cd9f9f64b723 173 SUPERFAMILY SSF55729 10 134 5.49E-16 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_09765 ba75c0ae39448fd412b2cd9f9f64b723 173 Pfam PF13527 Acetyltransferase (GNAT) domain 20 123 2.8E-8 T 14-10-2018 DA442_25310 371b2d341ef70edc3f6452239e0cc143 369 Pfam PF01553 Acyltransferase 92 203 1.2E-9 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DA442_25310 371b2d341ef70edc3f6452239e0cc143 369 SUPERFAMILY SSF69593 89 295 9.42E-9 T 14-10-2018 DA442_08735 9d1042badf9a78daec3e78b48d72b4b9 446 TIGRFAM TIGR02514 type_III_yscP: type III secretion system needle length determinant 307 444 1.2E-50 T 14-10-2018 IPR013354 Type III secretion system needle length determinant, C-terminal domain GO:0009405 DA442_18080 98f43ffd812498d68f69a9895e1a6dcf 222 Gene3D G3DSA:1.10.3720.10 3 217 8.9E-41 T 14-10-2018 IPR035906 MetI-like superfamily DA442_18080 98f43ffd812498d68f69a9895e1a6dcf 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 41 214 1.6E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DA442_18080 98f43ffd812498d68f69a9895e1a6dcf 222 SUPERFAMILY SSF161098 9 202 1.57E-31 T 14-10-2018 IPR035906 MetI-like superfamily DA442_18080 98f43ffd812498d68f69a9895e1a6dcf 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 6 112 3.6E-15 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DA442_25865 de28debfea973038f5d3ebffad697da7 545 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 269 323 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_25865 de28debfea973038f5d3ebffad697da7 545 SUPERFAMILY SSF81442 37 544 6.15E-193 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_25865 de28debfea973038f5d3ebffad697da7 545 PRINTS PR01165 Cytochrome c oxidase subunit I signature 313 328 4.5E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_25865 de28debfea973038f5d3ebffad697da7 545 PRINTS PR01165 Cytochrome c oxidase subunit I signature 187 205 4.5E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_25865 de28debfea973038f5d3ebffad697da7 545 PRINTS PR01165 Cytochrome c oxidase subunit I signature 114 138 4.5E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_25865 de28debfea973038f5d3ebffad697da7 545 PRINTS PR01165 Cytochrome c oxidase subunit I signature 216 235 4.5E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_25865 de28debfea973038f5d3ebffad697da7 545 PRINTS PR01165 Cytochrome c oxidase subunit I signature 267 288 4.5E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_25865 de28debfea973038f5d3ebffad697da7 545 PRINTS PR01165 Cytochrome c oxidase subunit I signature 157 169 4.5E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_25865 de28debfea973038f5d3ebffad697da7 545 PRINTS PR01165 Cytochrome c oxidase subunit I signature 372 390 4.5E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_25865 de28debfea973038f5d3ebffad697da7 545 PRINTS PR01165 Cytochrome c oxidase subunit I signature 400 419 4.5E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_25865 de28debfea973038f5d3ebffad697da7 545 PRINTS PR01165 Cytochrome c oxidase subunit I signature 450 471 4.5E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_25865 de28debfea973038f5d3ebffad697da7 545 PRINTS PR01165 Cytochrome c oxidase subunit I signature 337 358 4.5E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_25865 de28debfea973038f5d3ebffad697da7 545 PRINTS PR01165 Cytochrome c oxidase subunit I signature 40 65 4.5E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_25865 de28debfea973038f5d3ebffad697da7 545 PRINTS PR01165 Cytochrome c oxidase subunit I signature 87 110 4.5E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_25865 de28debfea973038f5d3ebffad697da7 545 Gene3D G3DSA:1.20.210.10 27 545 5.9E-220 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_25865 de28debfea973038f5d3ebffad697da7 545 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 49 491 1.3E-150 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_25865 de28debfea973038f5d3ebffad697da7 545 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 41 544 1.5E-213 T 14-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 DA442_24045 41f952fa218a284f45ebd6fdde8e9a51 289 Gene3D G3DSA:3.40.50.1980 72 188 3.8E-6 T 14-10-2018 DA442_24045 41f952fa218a284f45ebd6fdde8e9a51 289 SUPERFAMILY SSF53807 26 262 2.06E-18 T 14-10-2018 DA442_07615 d2f3b9da77d812c2c78fc80e0c0801e2 504 Gene3D G3DSA:2.60.200.20 5 110 5.6E-21 T 14-10-2018 DA442_07615 d2f3b9da77d812c2c78fc80e0c0801e2 504 SUPERFAMILY SSF49879 21 104 8.03E-24 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 DA442_07615 d2f3b9da77d812c2c78fc80e0c0801e2 504 SMART SM00240 29 80 5.1E-8 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 DA442_07615 d2f3b9da77d812c2c78fc80e0c0801e2 504 Pfam PF00498 FHA domain 31 97 8.7E-16 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 DA442_06385 1683a8ac92e13191a4230f7e09bb243e 165 Gene3D G3DSA:3.40.50.2300 1 136 1.8E-18 T 14-10-2018 DA442_06385 1683a8ac92e13191a4230f7e09bb243e 165 SMART SM00448 4 125 3.2E-11 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_06385 1683a8ac92e13191a4230f7e09bb243e 165 SUPERFAMILY SSF52172 1 142 5.12E-20 T 14-10-2018 IPR011006 CheY-like superfamily DA442_06385 1683a8ac92e13191a4230f7e09bb243e 165 Pfam PF00072 Response regulator receiver domain 6 125 1.2E-13 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_06555 01981c2a374624dc9d9a65a0f5e14220 247 Pfam PF07070 SpoOM protein 2 215 1.4E-61 T 14-10-2018 IPR009776 Sporulation stage 0, protein M DA442_03105 be3cd9aed86d91ba2c3280337128693b 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 5.9E-38 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 DA442_03105 be3cd9aed86d91ba2c3280337128693b 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 1.9E-57 T 14-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 DA442_03105 be3cd9aed86d91ba2c3280337128693b 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 DA442_03105 be3cd9aed86d91ba2c3280337128693b 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 9.2E-27 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 DA442_03105 be3cd9aed86d91ba2c3280337128693b 107 SUPERFAMILY SSF89360 1 96 1.01E-34 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 DA442_03105 be3cd9aed86d91ba2c3280337128693b 107 Gene3D G3DSA:2.60.300.12 2 107 1.0E-38 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 DA442_06295 64aa7346f08b8154c38194aa041df96c 374 Gene3D G3DSA:2.40.370.10 253 374 3.8E-23 T 14-10-2018 IPR023374 AttH-like domain superfamily DA442_06295 64aa7346f08b8154c38194aa041df96c 374 Pfam PF07143 CrtC N-terminal lipocalin domain 79 248 2.2E-44 T 14-10-2018 IPR010791 AttH domain DA442_06295 64aa7346f08b8154c38194aa041df96c 374 Pfam PF17186 Lipocalin-like domain 253 374 1.0E-33 T 14-10-2018 DA442_06295 64aa7346f08b8154c38194aa041df96c 374 SUPERFAMILY SSF159245 56 374 2.48E-91 T 14-10-2018 DA442_06295 64aa7346f08b8154c38194aa041df96c 374 Gene3D G3DSA:2.40.370.10 67 251 4.6E-54 T 14-10-2018 IPR023374 AttH-like domain superfamily DA442_04065 55024be1b2eb19e3fb9702f6a709db3d 248 Gene3D G3DSA:2.30.30.760 188 248 1.1E-12 T 14-10-2018 DA442_04065 55024be1b2eb19e3fb9702f6a709db3d 248 SMART SM00858 126 188 1.2E-9 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 DA442_04065 55024be1b2eb19e3fb9702f6a709db3d 248 Pfam PF13144 Chaperone for flagella basal body P-ring formation 52 246 3.8E-53 T 14-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal DA442_04065 55024be1b2eb19e3fb9702f6a709db3d 248 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 114 246 1.0E-41 T 14-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal DA442_24920 c9b89919f97f50c5eb692f2fc74aeea0 156 SMART SM01022 30 153 6.9E-34 T 14-10-2018 IPR007374 ASCH domain DA442_24920 c9b89919f97f50c5eb692f2fc74aeea0 156 PIRSF PIRSF021320 1 156 8.4E-50 T 14-10-2018 IPR009326 Protein of unknown function DUF984 DA442_24920 c9b89919f97f50c5eb692f2fc74aeea0 156 SUPERFAMILY SSF88697 2 155 3.73E-54 T 14-10-2018 IPR015947 PUA-like superfamily DA442_24920 c9b89919f97f50c5eb692f2fc74aeea0 156 Gene3D G3DSA:3.10.400.10 1 153 2.9E-58 T 14-10-2018 DA442_24920 c9b89919f97f50c5eb692f2fc74aeea0 156 Pfam PF04266 ASCH domain 41 153 7.9E-22 T 14-10-2018 IPR007374 ASCH domain DA442_00505 e1e5a64146141fa7e03c69e5c0775509 544 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 539 56.65 T 14-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 DA442_00505 e1e5a64146141fa7e03c69e5c0775509 544 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 445 4.4E-176 T 14-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 DA442_00505 e1e5a64146141fa7e03c69e5c0775509 544 SUPERFAMILY SSF56112 94 436 1.3E-46 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily DA442_00505 e1e5a64146141fa7e03c69e5c0775509 544 Pfam PF03109 ABC1 family 112 230 3.7E-36 T 14-10-2018 IPR004147 UbiB domain DA442_03480 8b6e2d56a80c13dffcbefc58a0bb340e 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 6.9E-73 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 DA442_03480 8b6e2d56a80c13dffcbefc58a0bb340e 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 90.329 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 DA442_03480 8b6e2d56a80c13dffcbefc58a0bb340e 149 Pfam PF03477 ATP cone domain 50 136 2.2E-17 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 DA442_16990 d55b7b9f41e7a54fccf698f84cd63de1 242 Gene3D G3DSA:3.40.50.10090 4 240 2.2E-68 T 14-10-2018 DA442_16990 d55b7b9f41e7a54fccf698f84cd63de1 242 Gene3D G3DSA:3.40.50.10090 32 161 2.2E-68 T 14-10-2018 DA442_16990 d55b7b9f41e7a54fccf698f84cd63de1 242 SUPERFAMILY SSF69618 1 241 9.42E-52 T 14-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DA442_16990 d55b7b9f41e7a54fccf698f84cd63de1 242 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 236 7.0E-32 T 14-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DA442_25295 a5b65a5777cad41df10d72790b382888 177 Gene3D G3DSA:3.40.50.620 1 177 2.9E-46 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DA442_25295 a5b65a5777cad41df10d72790b382888 177 Pfam PF01467 Cytidylyltransferase-like 6 144 1.3E-6 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DA442_25295 a5b65a5777cad41df10d72790b382888 177 SUPERFAMILY SSF52374 1 171 3.07E-27 T 14-10-2018 DA442_18395 bb7f211a4a7f614e6c9b08d86c3791fb 617 Gene3D G3DSA:3.30.2010.10 94 188 3.8E-32 T 14-10-2018 DA442_18395 bb7f211a4a7f614e6c9b08d86c3791fb 617 Pfam PF01435 Peptidase family M48 104 329 3.0E-27 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 DA442_21135 f850de1bf816e625c10092520e1c2acc 448 SUPERFAMILY SSF158791 32 134 3.4E-14 T 14-10-2018 DA442_21135 f850de1bf816e625c10092520e1c2acc 448 SUPERFAMILY SSF161093 276 446 1.57E-47 T 14-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 DA442_21135 f850de1bf816e625c10092520e1c2acc 448 Gene3D G3DSA:1.10.357.20 274 447 1.6E-47 T 14-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain DA442_21135 f850de1bf816e625c10092520e1c2acc 448 Gene3D G3DSA:3.10.580.10 133 258 2.6E-33 T 14-10-2018 DA442_21135 f850de1bf816e625c10092520e1c2acc 448 Pfam PF03448 MgtE intracellular N domain 35 135 1.1E-14 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain DA442_21135 f850de1bf816e625c10092520e1c2acc 448 Pfam PF01769 Divalent cation transporter 319 440 5.6E-24 T 14-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 DA442_21135 f850de1bf816e625c10092520e1c2acc 448 SMART SM00924 34 137 7.9E-13 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain DA442_21135 f850de1bf816e625c10092520e1c2acc 448 SUPERFAMILY SSF54631 140 272 1.44E-12 T 14-10-2018 DA442_12835 ffc046fb93146501d4ea8679bf3a1365 99 Pfam PF11743 Protein of unknown function (DUF3301) 6 96 2.5E-30 T 14-10-2018 IPR021732 Protein of unknown function DUF3301 DA442_24985 77f5b3146a0422f30f3479c7f111bb0d 299 Gene3D G3DSA:1.10.3720.10 23 285 1.3E-32 T 14-10-2018 IPR035906 MetI-like superfamily DA442_24985 77f5b3146a0422f30f3479c7f111bb0d 299 SUPERFAMILY SSF161098 24 294 1.68E-40 T 14-10-2018 IPR035906 MetI-like superfamily DA442_10720 d47d28d4dc4a121b8d343093664969bb 221 Pfam PF13505 Outer membrane protein beta-barrel domain 19 183 9.0E-13 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel DA442_10720 d47d28d4dc4a121b8d343093664969bb 221 SUPERFAMILY SSF56925 40 184 1.33E-18 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DA442_10720 d47d28d4dc4a121b8d343093664969bb 221 Gene3D G3DSA:2.40.160.20 35 189 1.1E-12 T 14-10-2018 DA442_15015 45e741f77c386a51f23328acc1bf71d6 159 Pfam PF06271 RDD family 9 149 8.2E-20 T 14-10-2018 IPR010432 RDD DA442_21270 35496e83b03d7922d902e486651deab5 143 PIRSF PIRSF028777 1 138 3.8E-52 T 14-10-2018 IPR031308 Uncharacterised conserved protein UCP028777 DA442_21270 35496e83b03d7922d902e486651deab5 143 Pfam PF03733 Inner membrane component domain 4 54 3.7E-15 T 14-10-2018 IPR005185 Inner membrane component domain DA442_21270 35496e83b03d7922d902e486651deab5 143 Pfam PF03733 Inner membrane component domain 76 126 3.3E-18 T 14-10-2018 IPR005185 Inner membrane component domain DA442_24145 9ceeca722fcb8f395bcaeee6e3e48dd0 436 Pfam PF05525 Branched-chain amino acid transport protein 5 423 1.6E-116 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 DA442_24145 9ceeca722fcb8f395bcaeee6e3e48dd0 436 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 11 410 5.4E-107 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 DA442_24335 fa40684f0d9b1423c326dd1f7352b541 451 SUPERFAMILY SSF56935 28 451 8.7E-89 T 14-10-2018 DA442_24335 fa40684f0d9b1423c326dd1f7352b541 451 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 19 451 5.6E-105 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) DA442_16945 0e75ca57cd3b82d086ca5989129c6a3b 238 Gene3D G3DSA:3.40.50.1000 11 231 1.5E-58 T 14-10-2018 IPR023214 HAD superfamily DA442_16945 0e75ca57cd3b82d086ca5989129c6a3b 238 Gene3D G3DSA:1.20.120.1600 24 110 1.5E-58 T 14-10-2018 DA442_16945 0e75ca57cd3b82d086ca5989129c6a3b 238 SUPERFAMILY SSF56784 9 238 1.68E-39 T 14-10-2018 IPR036412 HAD-like superfamily DA442_16945 0e75ca57cd3b82d086ca5989129c6a3b 238 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 206 2.0E-10 T 14-10-2018 DA442_16945 0e75ca57cd3b82d086ca5989129c6a3b 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 119 201 4.9E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DA442_03490 7d12f137d212f43f2113c963264973f1 217 PIRSF PIRSF000498 1 211 1.8E-80 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DA442_03490 7d12f137d212f43f2113c963264973f1 217 Pfam PF00677 Lumazine binding domain 3 87 6.6E-21 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DA442_03490 7d12f137d212f43f2113c963264973f1 217 Pfam PF00677 Lumazine binding domain 100 184 2.0E-24 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DA442_03490 7d12f137d212f43f2113c963264973f1 217 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 201 3.4E-67 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DA442_03490 7d12f137d212f43f2113c963264973f1 217 SUPERFAMILY SSF63380 93 198 6.12E-33 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DA442_03490 7d12f137d212f43f2113c963264973f1 217 Gene3D G3DSA:2.40.30.20 1 89 9.1E-28 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DA442_03490 7d12f137d212f43f2113c963264973f1 217 SUPERFAMILY SSF63380 1 89 1.79E-25 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DA442_03490 7d12f137d212f43f2113c963264973f1 217 Gene3D G3DSA:2.40.30.20 102 205 3.2E-36 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DA442_16195 970b2569037946ba84462e7e18ff496e 165 Pfam PF02308 MgtC family 19 141 7.4E-28 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 DA442_16195 970b2569037946ba84462e7e18ff496e 165 PRINTS PR01837 MgtC/SapB protein signature 41 59 1.2E-31 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 DA442_16195 970b2569037946ba84462e7e18ff496e 165 PRINTS PR01837 MgtC/SapB protein signature 95 119 1.2E-31 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 DA442_16195 970b2569037946ba84462e7e18ff496e 165 PRINTS PR01837 MgtC/SapB protein signature 22 41 1.2E-31 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 DA442_16195 970b2569037946ba84462e7e18ff496e 165 PRINTS PR01837 MgtC/SapB protein signature 68 90 1.2E-31 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 DA442_23970 7021969e65f94dbb67b73ffe99bd3160 697 Pfam PF00593 TonB dependent receptor 240 696 4.1E-50 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DA442_23970 7021969e65f94dbb67b73ffe99bd3160 697 Gene3D G3DSA:2.170.130.10 35 160 3.1E-30 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DA442_23970 7021969e65f94dbb67b73ffe99bd3160 697 Gene3D G3DSA:2.40.170.20 161 697 7.0E-99 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DA442_23970 7021969e65f94dbb67b73ffe99bd3160 697 SUPERFAMILY SSF56935 22 697 1.55E-116 T 14-10-2018 DA442_23970 7021969e65f94dbb67b73ffe99bd3160 697 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 150 1.5E-16 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain DA442_23970 7021969e65f94dbb67b73ffe99bd3160 697 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 55 696 1.8E-90 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 DA442_03640 5560c3080daa051ed1f66f42e4547e84 474 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 7 460 2.6E-206 T 14-10-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00500+2.7.1.201 DA442_03640 5560c3080daa051ed1f66f42e4547e84 474 SUPERFAMILY SSF55604 9 81 3.66E-21 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DA442_03640 5560c3080daa051ed1f66f42e4547e84 474 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DA442_03640 5560c3080daa051ed1f66f42e4547e84 474 Pfam PF02378 Phosphotransferase system, EIIC 112 404 3.9E-33 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DA442_03640 5560c3080daa051ed1f66f42e4547e84 474 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 30 111 9.2E-17 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 DA442_03640 5560c3080daa051ed1f66f42e4547e84 474 Gene3D G3DSA:3.30.1360.60 3 78 4.7E-24 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DA442_03640 5560c3080daa051ed1f66f42e4547e84 474 Pfam PF00367 phosphotransferase system, EIIB 11 43 1.4E-14 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DA442_22815 5fcf18922e7ae53f818253e0d498e4a1 365 Gene3D G3DSA:1.25.40.10 15 230 3.3E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_22815 5fcf18922e7ae53f818253e0d498e4a1 365 Pfam PF02698 DUF218 domain 194 320 1.4E-19 T 14-10-2018 IPR003848 Domain of unknown function DUF218 DA442_22815 5fcf18922e7ae53f818253e0d498e4a1 365 SUPERFAMILY SSF48452 63 158 7.83E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_12420 a58fae6dc5449d4cd46f75cf055e6337 643 Gene3D G3DSA:3.30.750.140 492 606 2.2E-31 T 14-10-2018 IPR038610 FliK-like, C-terminal domain superfamily DA442_12420 a58fae6dc5449d4cd46f75cf055e6337 643 Pfam PF02120 Flagellar hook-length control protein FliK 513 596 7.4E-25 T 14-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal DA442_08950 5a671291707196946accb08af4a283c0 471 Pfam PF02321 Outer membrane efflux protein 28 243 1.5E-24 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DA442_08950 5a671291707196946accb08af4a283c0 471 Pfam PF02321 Outer membrane efflux protein 265 446 1.6E-24 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DA442_08950 5a671291707196946accb08af4a283c0 471 SUPERFAMILY SSF56954 9 446 4.19E-67 T 14-10-2018 DA442_08950 5a671291707196946accb08af4a283c0 471 Gene3D G3DSA:1.20.1600.10 23 459 1.2E-63 T 14-10-2018 DA442_17990 f3f43a23ae2114bc0cc98a219aabe8ef 261 SUPERFAMILY SSF52096 5 260 1.67E-77 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DA442_17990 f3f43a23ae2114bc0cc98a219aabe8ef 261 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 102 122 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 DA442_17990 f3f43a23ae2114bc0cc98a219aabe8ef 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 261 3.6E-57 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 DA442_17990 f3f43a23ae2114bc0cc98a219aabe8ef 261 Gene3D G3DSA:3.90.226.10 3 261 8.2E-80 T 14-10-2018 DA442_21610 d8a71ade2df77cea530122cf5a14f8e4 608 SMART SM00382 386 577 1.5E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_21610 d8a71ade2df77cea530122cf5a14f8e4 608 SUPERFAMILY SSF90123 30 333 6.15E-47 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DA442_21610 d8a71ade2df77cea530122cf5a14f8e4 608 Gene3D G3DSA:3.40.50.300 351 604 2.1E-92 T 14-10-2018 DA442_21610 d8a71ade2df77cea530122cf5a14f8e4 608 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_21610 d8a71ade2df77cea530122cf5a14f8e4 608 Gene3D G3DSA:1.20.1560.10 6 335 3.7E-24 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DA442_21610 d8a71ade2df77cea530122cf5a14f8e4 608 Pfam PF00664 ABC transporter transmembrane region 40 308 1.2E-16 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DA442_21610 d8a71ade2df77cea530122cf5a14f8e4 608 Pfam PF00005 ABC transporter 378 531 9.3E-37 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_21610 d8a71ade2df77cea530122cf5a14f8e4 608 SUPERFAMILY SSF52540 351 601 8.25E-90 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_21785 fbb496f1723beb4472056a1b8e55caae 84 Pfam PF04728 Lipoprotein leucine-zipper 32 84 9.6E-25 T 14-10-2018 IPR006817 Lipoprotein leucine-zipper GO:0019867 DA442_21785 fbb496f1723beb4472056a1b8e55caae 84 Gene3D G3DSA:1.20.5.190 28 83 1.8E-12 T 14-10-2018 DA442_21785 fbb496f1723beb4472056a1b8e55caae 84 PIRSF PIRSF002855 1 84 1.9E-31 T 14-10-2018 IPR016367 Murein-lipoprotein DA442_21785 fbb496f1723beb4472056a1b8e55caae 84 SUPERFAMILY SSF58042 29 83 3.53E-16 T 14-10-2018 DA442_08130 2485c1bbf382c8b9b990caf532ce4351 202 Gene3D G3DSA:3.30.70.20 63 120 1.4E-33 T 14-10-2018 DA442_08130 2485c1bbf382c8b9b990caf532ce4351 202 SUPERFAMILY SSF54862 1 183 6.38E-48 T 14-10-2018 DA442_08130 2485c1bbf382c8b9b990caf532ce4351 202 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DA442_08130 2485c1bbf382c8b9b990caf532ce4351 202 Gene3D G3DSA:3.30.70.20 5 181 1.4E-33 T 14-10-2018 DA442_08130 2485c1bbf382c8b9b990caf532ce4351 202 Pfam PF13247 4Fe-4S dicluster domain 54 125 9.1E-10 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DA442_09920 65f32d83bfd6314966c58242f255ea51 55 Pfam PF11665 Protein of unknown function (DUF3265) 12 38 9.2E-7 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_18620 876a95fb83165a8e7dd8eecf229452a3 240 Pfam PF01925 Sulfite exporter TauE/SafE 11 230 2.2E-24 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 DA442_09140 b9ccd6a4408a4c9bfaeb496befa4b4b7 309 Gene3D G3DSA:3.40.190.10 33 271 8.3E-30 T 14-10-2018 DA442_09140 b9ccd6a4408a4c9bfaeb496befa4b4b7 309 Gene3D G3DSA:3.40.190.10 116 240 8.3E-30 T 14-10-2018 DA442_09140 b9ccd6a4408a4c9bfaeb496befa4b4b7 309 SUPERFAMILY SSF53850 29 274 1.55E-18 T 14-10-2018 DA442_09140 b9ccd6a4408a4c9bfaeb496befa4b4b7 309 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 31 290 4.2E-54 T 14-10-2018 DA442_20705 65ee6e0cb4bd4e78cb55972b5cb4029e 321 Gene3D G3DSA:1.50.10.150 6 309 1.3E-32 T 14-10-2018 IPR038665 Voltage-dependent anion channel superfamily DA442_20705 65ee6e0cb4bd4e78cb55972b5cb4029e 321 Pfam PF03595 Voltage-dependent anion channel 12 304 2.1E-25 T 14-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 DA442_22490 c831c8d165762f4ae1c1ee824ad731fc 238 Pfam PF13462 Thioredoxin 77 234 2.9E-17 T 14-10-2018 IPR012336 Thioredoxin-like fold DA442_22490 c831c8d165762f4ae1c1ee824ad731fc 238 Gene3D G3DSA:3.40.30.10 67 238 1.4E-33 T 14-10-2018 DA442_22490 c831c8d165762f4ae1c1ee824ad731fc 238 SUPERFAMILY SSF52833 69 233 2.72E-31 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_14100 521509d193476832135cf0823d1c265f 122 PIRSF PIRSF006287 1 122 9.5E-50 T 14-10-2018 IPR008249 Uncharacterised protein family UPF0231 DA442_14100 521509d193476832135cf0823d1c265f 122 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 120 7.0E-65 T 14-10-2018 IPR008249 Uncharacterised protein family UPF0231 DA442_14100 521509d193476832135cf0823d1c265f 122 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 120 1.8E-42 T 14-10-2018 IPR008249 Uncharacterised protein family UPF0231 DA442_14100 521509d193476832135cf0823d1c265f 122 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 122 31.269 T 14-10-2018 IPR008249 Uncharacterised protein family UPF0231 DA442_10870 4b612c58a061baf851208621135c4b3f 235 SUPERFAMILY SSF48452 102 208 1.87E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_10870 4b612c58a061baf851208621135c4b3f 235 Gene3D G3DSA:1.25.40.10 143 235 3.8E-27 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_22885 3191f3324954b761d3596854f95c0a41 231 PIRSF PIRSF028137 1 231 2.3E-105 T 14-10-2018 IPR016870 Uncharacterised conserved protein UCP028137, membrane DA442_05060 485f4a9f1be1fff62170363ddeb3c0a8 465 SUPERFAMILY SSF48452 67 259 1.14E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_02130 c047c421f065929bf2abd1cfb099a856 267 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 264 17.552 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 DA442_02130 c047c421f065929bf2abd1cfb099a856 267 Pfam PF02673 Bacitracin resistance protein BacA 6 258 4.2E-82 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 DA442_02130 c047c421f065929bf2abd1cfb099a856 267 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 6 257 1.6E-73 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 DA442_16825 d0d6cbd3f0a12a12f1f2e0773d0c0e61 199 Gene3D G3DSA:3.40.50.150 6 199 5.3E-63 T 14-10-2018 DA442_16825 d0d6cbd3f0a12a12f1f2e0773d0c0e61 199 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 131 137 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DA442_16825 d0d6cbd3f0a12a12f1f2e0773d0c0e61 199 Pfam PF03602 Conserved hypothetical protein 95 19 195 1.5E-61 T 14-10-2018 DA442_16825 d0d6cbd3f0a12a12f1f2e0773d0c0e61 199 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 17 196 1.9E-60 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 DA442_16825 d0d6cbd3f0a12a12f1f2e0773d0c0e61 199 SUPERFAMILY SSF53335 19 196 3.63E-54 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_16825 d0d6cbd3f0a12a12f1f2e0773d0c0e61 199 PIRSF PIRSF004553 18 198 2.1E-55 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 DA442_05640 5c9565f3b1170ee7394131e063df9274 340 Pfam PF00579 tRNA synthetases class I (W and Y) 10 292 1.3E-53 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 DA442_05640 5c9565f3b1170ee7394131e063df9274 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 204 214 1.5E-21 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DA442_05640 5c9565f3b1170ee7394131e063df9274 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 74 93 1.5E-21 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DA442_05640 5c9565f3b1170ee7394131e063df9274 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 152 173 1.5E-21 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DA442_05640 5c9565f3b1170ee7394131e063df9274 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 23 39 1.5E-21 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DA442_05640 5c9565f3b1170ee7394131e063df9274 340 SUPERFAMILY SSF52374 12 337 5.3E-75 T 14-10-2018 DA442_05640 5c9565f3b1170ee7394131e063df9274 340 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 10 337 5.0E-69 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DA442_05640 5c9565f3b1170ee7394131e063df9274 340 Gene3D G3DSA:3.40.50.620 13 332 1.4E-99 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DA442_05640 5c9565f3b1170ee7394131e063df9274 340 Gene3D G3DSA:1.10.240.10 191 305 1.4E-99 T 14-10-2018 DA442_24255 96e4be9b8c030c87545a426f646db975 50 Pfam PF10013 Uncharacterized protein conserved in bacteria (DUF2256) 6 43 8.1E-23 T 14-10-2018 IPR017136 Uncharacterised conserved protein UCP037205 DA442_24255 96e4be9b8c030c87545a426f646db975 50 PIRSF PIRSF037205 1 50 6.0E-27 T 14-10-2018 IPR017136 Uncharacterised conserved protein UCP037205 DA442_07810 e2dd226a0c08e7a1569ce689255bb9a7 283 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 2 276 1.6E-50 T 14-10-2018 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 DA442_04655 9c13497c0be7f38340682681ab9c1bad 571 Pfam PF00535 Glycosyl transferase family 2 11 130 7.7E-19 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DA442_04655 9c13497c0be7f38340682681ab9c1bad 571 Gene3D G3DSA:3.90.550.10 10 219 6.1E-26 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DA442_04655 9c13497c0be7f38340682681ab9c1bad 571 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 264 560 2.5E-14 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 DA442_04655 9c13497c0be7f38340682681ab9c1bad 571 SUPERFAMILY SSF53448 11 240 1.88E-33 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DA442_01090 ac533dabe5bfc6c14c119e934306fb1c 387 TIGRFAM TIGR04181 NHT_00031: aminotransferase, LLPSF_NHT_00031 family 24 380 2.1E-163 T 14-10-2018 IPR026385 Aminotransferase, LLPSF_NHT_00031 family DA442_01090 ac533dabe5bfc6c14c119e934306fb1c 387 PIRSF PIRSF000390 19 386 3.8E-87 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DA442_01090 ac533dabe5bfc6c14c119e934306fb1c 387 Gene3D G3DSA:3.40.640.10 2 279 7.6E-84 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_01090 ac533dabe5bfc6c14c119e934306fb1c 387 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 34 382 2.0E-80 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DA442_01090 ac533dabe5bfc6c14c119e934306fb1c 387 SUPERFAMILY SSF53383 21 382 5.84E-91 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_01090 ac533dabe5bfc6c14c119e934306fb1c 387 Gene3D G3DSA:3.90.1150.10 281 383 5.7E-17 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DA442_20495 50471681f9cd876416f994d61dbceeb8 267 SUPERFAMILY SSF52096 10 265 1.46E-69 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DA442_20495 50471681f9cd876416f994d61dbceeb8 267 Gene3D G3DSA:1.10.12.10 209 267 8.1E-23 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal DA442_20495 50471681f9cd876416f994d61dbceeb8 267 Gene3D G3DSA:3.90.226.10 8 207 9.2E-62 T 14-10-2018 DA442_20495 50471681f9cd876416f994d61dbceeb8 267 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 265 1.2E-47 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 DA442_25685 5b452ca3a927f28b55a5881fa0b3f13f 147 SUPERFAMILY SSF55804 1 145 1.7E-35 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DA442_25685 5b452ca3a927f28b55a5881fa0b3f13f 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 145 1.0E-31 T 14-10-2018 IPR002178 PTS EIIA type-2 domain DA442_25685 5b452ca3a927f28b55a5881fa0b3f13f 147 Gene3D G3DSA:3.40.930.10 1 146 8.9E-48 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DA442_20135 32040049c65bc720900baf3299f30a12 454 Gene3D G3DSA:3.40.190.10 34 432 1.4E-142 T 14-10-2018 DA442_20135 32040049c65bc720900baf3299f30a12 454 Pfam PF13379 NMT1-like family 28 308 8.0E-108 T 14-10-2018 DA442_20135 32040049c65bc720900baf3299f30a12 454 SUPERFAMILY SSF53850 34 334 2.84E-22 T 14-10-2018 DA442_20135 32040049c65bc720900baf3299f30a12 454 Gene3D G3DSA:3.40.190.10 119 437 1.4E-142 T 14-10-2018 DA442_21435 1b29b1ee489768679f50b8acb4c6f5b7 296 Gene3D G3DSA:1.10.3720.10 1 283 3.2E-74 T 14-10-2018 IPR035906 MetI-like superfamily DA442_21435 1b29b1ee489768679f50b8acb4c6f5b7 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 285 8.7E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DA442_21435 1b29b1ee489768679f50b8acb4c6f5b7 296 SUPERFAMILY SSF161098 10 296 1.31E-69 T 14-10-2018 IPR035906 MetI-like superfamily DA442_13870 1a4249726e0c5c1e45d7494dc04e1afa 306 Gene3D G3DSA:1.25.40.10 28 296 4.1E-81 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_13870 1a4249726e0c5c1e45d7494dc04e1afa 306 SUPERFAMILY SSF48452 34 286 1.37E-68 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_13870 1a4249726e0c5c1e45d7494dc04e1afa 306 PIRSF PIRSF004654 1 296 8.7E-91 T 14-10-2018 IPR023605 Lipoprotein NlpI DA442_13870 1a4249726e0c5c1e45d7494dc04e1afa 306 SMART SM00028 100 133 0.0059 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_13870 1a4249726e0c5c1e45d7494dc04e1afa 306 SMART SM00028 134 167 180.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_13870 1a4249726e0c5c1e45d7494dc04e1afa 306 SMART SM00028 238 271 45.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_13870 1a4249726e0c5c1e45d7494dc04e1afa 306 SMART SM00028 66 99 0.057 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DA442_12305 a256e6be9b8e9ee594674b31033cf068 247 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 228 1.7E-85 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 DA442_12305 a256e6be9b8e9ee594674b31033cf068 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 3.8E-65 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 DA442_12305 a256e6be9b8e9ee594674b31033cf068 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 3.8E-65 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 DA442_12305 a256e6be9b8e9ee594674b31033cf068 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 3.8E-65 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 DA442_12305 a256e6be9b8e9ee594674b31033cf068 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 3.8E-65 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 DA442_12305 a256e6be9b8e9ee594674b31033cf068 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 204 228 3.8E-65 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 DA442_12305 a256e6be9b8e9ee594674b31033cf068 247 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 3.8E-65 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 DA442_12305 a256e6be9b8e9ee594674b31033cf068 247 Pfam PF01578 Cytochrome C assembly protein 29 184 1.6E-32 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 DA442_11525 d1a29f63b69484c7b27289e3e045f618 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 16.766 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_11525 d1a29f63b69484c7b27289e3e045f618 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 2.4E-19 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_11525 d1a29f63b69484c7b27289e3e045f618 56 Pfam PF01783 Ribosomal L32p protein family 2 56 1.5E-19 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_11525 d1a29f63b69484c7b27289e3e045f618 56 SUPERFAMILY SSF57829 2 55 1.53E-17 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 DA442_10020 24d80d7f9a81a1dfe957c3b4e819c5b6 251 Pfam PF04471 Restriction endonuclease 11 120 1.4E-8 T 14-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 DA442_10020 24d80d7f9a81a1dfe957c3b4e819c5b6 251 SUPERFAMILY SSF52980 9 128 1.13E-17 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DA442_18860 289490c4f1419473c4ec9976353be1ea 86 Gene3D G3DSA:1.20.120.1930 1 86 2.8E-38 T 14-10-2018 DA442_18860 289490c4f1419473c4ec9976353be1ea 86 Pfam PF16691 Domain of unknown function (DUF5062) 6 86 1.8E-30 T 14-10-2018 IPR032036 Protein of unknown function DUF5062 DA442_01555 7fc5641f69291cbf481ff2b64259efcd 126 SUPERFAMILY SSF64263 1 119 5.36E-51 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01555 7fc5641f69291cbf481ff2b64259efcd 126 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01555 7fc5641f69291cbf481ff2b64259efcd 126 Pfam PF01196 Ribosomal protein L17 20 116 1.0E-34 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01555 7fc5641f69291cbf481ff2b64259efcd 126 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 5.5E-49 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01555 7fc5641f69291cbf481ff2b64259efcd 126 Gene3D G3DSA:3.90.1030.10 1 117 4.0E-48 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01555 7fc5641f69291cbf481ff2b64259efcd 126 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.798 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01575 0f2fcf9275b5f48955a0cab17ba152bb 153 Gene3D G3DSA:3.40.630.30 2 149 4.2E-42 T 14-10-2018 DA442_01575 0f2fcf9275b5f48955a0cab17ba152bb 153 SUPERFAMILY SSF55729 1 150 1.98E-37 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_01575 0f2fcf9275b5f48955a0cab17ba152bb 153 Pfam PF13673 Acetyltransferase (GNAT) domain 47 149 7.8E-16 T 14-10-2018 IPR000182 GNAT domain DA442_04500 4f11093afd9f2c08a28c17e9bdd4fd6c 148 PIRSF PIRSF000714 8 146 1.4E-53 T 14-10-2018 IPR026026 Histidine triad hydrolase, Hint-type DA442_04500 4f11093afd9f2c08a28c17e9bdd4fd6c 148 Gene3D G3DSA:3.30.428.10 7 147 2.1E-43 T 14-10-2018 IPR036265 HIT-like superfamily DA442_04500 4f11093afd9f2c08a28c17e9bdd4fd6c 148 SUPERFAMILY SSF54197 8 139 1.23E-34 T 14-10-2018 IPR036265 HIT-like superfamily DA442_04500 4f11093afd9f2c08a28c17e9bdd4fd6c 148 Pfam PF01230 HIT domain 17 105 3.5E-19 T 14-10-2018 IPR001310 Histidine triad (HIT) protein DA442_16385 9cdc85aaf7264a3dcf643bfce07f2043 521 ProSitePatterns PS00211 ABC transporters family signature. 438 452 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_16385 9cdc85aaf7264a3dcf643bfce07f2043 521 Pfam PF00005 ABC transporter 337 465 6.0E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_16385 9cdc85aaf7264a3dcf643bfce07f2043 521 SUPERFAMILY SSF52540 3 246 1.87E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_16385 9cdc85aaf7264a3dcf643bfce07f2043 521 SUPERFAMILY SSF52540 333 507 6.14E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_16385 9cdc85aaf7264a3dcf643bfce07f2043 521 Gene3D G3DSA:3.40.50.300 3 280 5.8E-64 T 14-10-2018 DA442_16385 9cdc85aaf7264a3dcf643bfce07f2043 521 Pfam PF12848 ABC transporter 228 304 6.8E-18 T 14-10-2018 IPR032781 ABC-transporter extension domain DA442_16385 9cdc85aaf7264a3dcf643bfce07f2043 521 SMART SM00382 345 512 3.9E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_16385 9cdc85aaf7264a3dcf643bfce07f2043 521 SMART SM00382 28 233 8.6E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_16385 9cdc85aaf7264a3dcf643bfce07f2043 521 Pfam PF00005 ABC transporter 22 188 2.7E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_16385 9cdc85aaf7264a3dcf643bfce07f2043 521 Gene3D G3DSA:3.40.50.300 285 518 4.9E-44 T 14-10-2018 DA442_22175 92a88e4ebaa4a808abc7cc654e4cd22f 265 Pfam PF00563 EAL domain 30 250 1.2E-9 T 14-10-2018 IPR001633 EAL domain DA442_22175 92a88e4ebaa4a808abc7cc654e4cd22f 265 SUPERFAMILY SSF141868 30 257 1.96E-9 T 14-10-2018 IPR035919 EAL domain superfamily DA442_22175 92a88e4ebaa4a808abc7cc654e4cd22f 265 Gene3D G3DSA:3.20.20.450 26 260 3.0E-9 T 14-10-2018 IPR035919 EAL domain superfamily DA442_24715 e4da37b73bd1995e574040c9fca96535 943 Gene3D G3DSA:1.20.1050.60 463 578 4.9E-199 T 14-10-2018 DA442_24715 e4da37b73bd1995e574040c9fca96535 943 Gene3D G3DSA:1.20.1610.10 579 785 4.9E-199 T 14-10-2018 DA442_24715 e4da37b73bd1995e574040c9fca96535 943 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 441 914 5.9E-98 T 14-10-2018 IPR005887 Alpha-1,2-mannosidase, putative DA442_24715 e4da37b73bd1995e574040c9fca96535 943 SUPERFAMILY SSF48208 353 904 8.33E-8 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 DA442_24715 e4da37b73bd1995e574040c9fca96535 943 Pfam PF07971 Glycosyl hydrolase family 92 320 910 1.6E-123 T 14-10-2018 IPR012939 Glycosyl hydrolase family 92 DA442_24715 e4da37b73bd1995e574040c9fca96535 943 Gene3D G3DSA:2.70.98.10 87 462 4.9E-199 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 DA442_24715 e4da37b73bd1995e574040c9fca96535 943 Gene3D G3DSA:3.30.2080.10 383 913 4.9E-199 T 14-10-2018 DA442_18490 a4b955056e22d7abd25d2b4866748e5d 399 SUPERFAMILY SSF52540 151 332 4.98E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_18490 a4b955056e22d7abd25d2b4866748e5d 399 Gene3D G3DSA:3.40.50.300 149 380 5.5E-16 T 14-10-2018 DA442_18490 a4b955056e22d7abd25d2b4866748e5d 399 Pfam PF13614 AAA domain 153 310 8.5E-7 T 14-10-2018 IPR025669 AAA domain DA442_17205 6203a2311375abefc1590880b40f9b9f 444 Pfam PF02581 Thiamine monophosphate synthase 235 412 5.8E-51 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DA442_17205 6203a2311375abefc1590880b40f9b9f 444 SUPERFAMILY SSF51391 225 429 1.7E-58 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DA442_17205 6203a2311375abefc1590880b40f9b9f 444 Gene3D G3DSA:3.20.20.70 218 434 3.1E-52 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_24040 0b2b71c3a96d597e38a8b738cce9e358 291 Pfam PF00950 ABC 3 transport family 23 285 2.9E-55 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 DA442_24040 0b2b71c3a96d597e38a8b738cce9e358 291 Gene3D G3DSA:1.10.3470.10 77 287 6.6E-9 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DA442_24040 0b2b71c3a96d597e38a8b738cce9e358 291 SUPERFAMILY SSF81345 15 281 6.02E-33 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DA442_24700 e7361656ed6e258c037b8a2465292f55 818 SUPERFAMILY SSF48208 284 792 1.25E-38 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 DA442_24700 e7361656ed6e258c037b8a2465292f55 818 Gene3D G3DSA:2.70.98.10 42 372 6.1E-214 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 DA442_24700 e7361656ed6e258c037b8a2465292f55 818 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 36 546 1.0E-109 T 14-10-2018 IPR005887 Alpha-1,2-mannosidase, putative DA442_24700 e7361656ed6e258c037b8a2465292f55 818 Gene3D G3DSA:1.20.1610.10 478 684 6.1E-214 T 14-10-2018 DA442_24700 e7361656ed6e258c037b8a2465292f55 818 Gene3D G3DSA:3.30.2080.10 319 809 6.1E-214 T 14-10-2018 DA442_24700 e7361656ed6e258c037b8a2465292f55 818 Gene3D G3DSA:1.20.1050.60 373 477 6.1E-214 T 14-10-2018 DA442_24700 e7361656ed6e258c037b8a2465292f55 818 Pfam PF07971 Glycosyl hydrolase family 92 262 808 2.9E-143 T 14-10-2018 IPR012939 Glycosyl hydrolase family 92 DA442_16655 c45ba3b6279c688550ddf91549372a97 446 SUPERFAMILY SSF56024 14 181 3.4E-26 T 14-10-2018 DA442_16655 c45ba3b6279c688550ddf91549372a97 446 Pfam PF13091 PLD-like domain 34 149 1.8E-7 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 DA442_16655 c45ba3b6279c688550ddf91549372a97 446 Pfam PF13091 PLD-like domain 251 402 2.9E-24 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 DA442_16655 c45ba3b6279c688550ddf91549372a97 446 SUPERFAMILY SSF56024 248 425 6.02E-27 T 14-10-2018 DA442_16655 c45ba3b6279c688550ddf91549372a97 446 PIRSF PIRSF000850 2 446 2.8E-214 T 14-10-2018 DA442_16655 c45ba3b6279c688550ddf91549372a97 446 Gene3D G3DSA:3.30.870.10 12 441 2.7E-164 T 14-10-2018 DA442_16655 c45ba3b6279c688550ddf91549372a97 446 Gene3D G3DSA:3.30.870.10 18 225 2.7E-164 T 14-10-2018 DA442_16655 c45ba3b6279c688550ddf91549372a97 446 SMART SM00155 347 374 0.0078 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 DA442_16655 c45ba3b6279c688550ddf91549372a97 446 SMART SM00155 126 152 7.7E-4 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 DA442_15345 5e1cd1f402de8e437f1d3c2178b59925 216 Pfam PF04612 Type II secretion system (T2SS), protein M 8 75 4.9E-8 T 14-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 DA442_24495 771baecaaa39b9f9b99c0efc8cc65bb9 456 Gene3D G3DSA:3.30.1330.90 10 157 3.7E-50 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 DA442_24495 771baecaaa39b9f9b99c0efc8cc65bb9 456 SUPERFAMILY SSF143548 16 155 1.07E-43 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 DA442_24495 771baecaaa39b9f9b99c0efc8cc65bb9 456 Pfam PF03313 Serine dehydratase alpha chain 183 447 1.2E-95 T 14-10-2018 IPR005130 Serine dehydratase-like, alpha subunit DA442_24495 771baecaaa39b9f9b99c0efc8cc65bb9 456 Pfam PF03315 Serine dehydratase beta chain 3 152 2.5E-53 T 14-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 DA442_24495 771baecaaa39b9f9b99c0efc8cc65bb9 456 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 448 2.2E-200 T 14-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 DA442_20400 bd3ea4175175f6cdf0a15e93efe938f7 244 Gene3D G3DSA:3.40.109.10 27 243 5.7E-50 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DA442_20400 bd3ea4175175f6cdf0a15e93efe938f7 244 Pfam PF00881 Nitroreductase family 36 219 4.4E-19 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 DA442_20400 bd3ea4175175f6cdf0a15e93efe938f7 244 SUPERFAMILY SSF55469 31 242 2.22E-55 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DA442_01380 6950a5837dae6fc055af7b2698601bfc 305 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 13 295 1.3E-98 T 14-10-2018 DA442_01380 6950a5837dae6fc055af7b2698601bfc 305 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 4 298 20.796 T 14-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 DA442_01380 6950a5837dae6fc055af7b2698601bfc 305 PIRSF PIRSF005355 1 303 7.9E-85 T 14-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 DA442_01380 6950a5837dae6fc055af7b2698601bfc 305 Pfam PF01040 UbiA prenyltransferase family 21 270 1.5E-39 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 DA442_14280 61306dc20f10a61f4242f646f03a3fdb 64 Gene3D G3DSA:3.30.50.10 1 64 2.3E-24 T 14-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 DA442_14280 61306dc20f10a61f4242f646f03a3fdb 64 Pfam PF03884 DNA gyrase inhibitor YacG 7 57 4.6E-24 T 14-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 DA442_14280 61306dc20f10a61f4242f646f03a3fdb 64 SUPERFAMILY SSF57716 2 62 8.84E-21 T 14-10-2018 DA442_14280 61306dc20f10a61f4242f646f03a3fdb 64 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 3 59 18.329 T 14-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 DA442_01310 66b2e7e59a4970a6e1d1c3448a580176 182 Pfam PF02397 Bacterial sugar transferase 3 172 9.1E-48 T 14-10-2018 IPR003362 Bacterial sugar transferase DA442_04845 1f972dc5e15a4b7ce878092c9053a82a 435 SUPERFAMILY SSF56322 30 425 4.97E-99 T 14-10-2018 IPR005801 ADC synthase GO:0009058 DA442_04845 1f972dc5e15a4b7ce878092c9053a82a 435 Hamap MF_01935 Isochorismate synthase MenF [menF]. 3 427 30.733 T 14-10-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 DA442_04845 1f972dc5e15a4b7ce878092c9053a82a 435 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 85 424 1.2E-102 T 14-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 DA442_04845 1f972dc5e15a4b7ce878092c9053a82a 435 Gene3D G3DSA:3.60.120.10 1 429 6.1E-127 T 14-10-2018 IPR005801 ADC synthase GO:0009058 DA442_04845 1f972dc5e15a4b7ce878092c9053a82a 435 Pfam PF00425 chorismate binding enzyme 165 417 4.0E-71 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal DA442_09130 6b8fa43204976f8691335e18b1aba0b0 313 SUPERFAMILY SSF52317 18 297 7.4E-102 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DA442_09130 6b8fa43204976f8691335e18b1aba0b0 313 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 301 1.7E-161 T 14-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 DA442_09130 6b8fa43204976f8691335e18b1aba0b0 313 PIRSF PIRSF000450 1 309 6.1E-147 T 14-10-2018 IPR033752 MetA family DA442_09130 6b8fa43204976f8691335e18b1aba0b0 313 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 2.0E-127 T 14-10-2018 DA442_09130 6b8fa43204976f8691335e18b1aba0b0 313 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 299 41.02 T 14-10-2018 IPR033752 MetA family DA442_09130 6b8fa43204976f8691335e18b1aba0b0 313 Gene3D G3DSA:3.40.50.880 1 301 5.5E-124 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DA442_09130 6b8fa43204976f8691335e18b1aba0b0 313 Pfam PF04204 Homoserine O-succinyltransferase 2 299 7.1E-135 T 14-10-2018 IPR033752 MetA family DA442_12615 9d53c7e34289cbe9ae306640d701d50d 417 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 319 339 - T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 DA442_12615 9d53c7e34289cbe9ae306640d701d50d 417 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 4 395 1.1E-110 T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 DA442_12615 9d53c7e34289cbe9ae306640d701d50d 417 Pfam PF00860 Permease family 3 371 3.1E-91 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 DA442_11005 df234be8761e36b0271ec6e4a505d100 285 Gene3D G3DSA:3.20.20.140 3 250 9.0E-83 T 14-10-2018 DA442_11005 df234be8761e36b0271ec6e4a505d100 285 SUPERFAMILY SSF89550 1 275 8.63E-55 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 DA442_11005 df234be8761e36b0271ec6e4a505d100 285 Gene3D G3DSA:1.10.150.650 98 169 9.0E-83 T 14-10-2018 DA442_11005 df234be8761e36b0271ec6e4a505d100 285 Pfam PF02811 PHP domain 4 181 9.4E-11 T 14-10-2018 IPR004013 PHP domain GO:0003824 DA442_11005 df234be8761e36b0271ec6e4a505d100 285 SMART SM00481 3 70 2.5E-18 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal DA442_04495 2d7f94604c78195744055971929a9f92 76 Pfam PF09012 FeoC like transcriptional regulator 2 54 9.0E-13 T 14-10-2018 IPR015102 Transcriptional regulator HTH-type, FeoC DA442_04495 2d7f94604c78195744055971929a9f92 76 SUPERFAMILY SSF46785 1 53 4.55E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_04495 2d7f94604c78195744055971929a9f92 76 Gene3D G3DSA:1.10.10.10 1 72 5.7E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_24765 01607c7472fa81bceadf8b5391c42721 217 Gene3D G3DSA:3.40.50.850 7 212 3.6E-37 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DA442_24765 01607c7472fa81bceadf8b5391c42721 217 SUPERFAMILY SSF52499 4 213 1.31E-27 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DA442_24765 01607c7472fa81bceadf8b5391c42721 217 Pfam PF00857 Isochorismatase family 10 209 4.7E-36 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 DA442_21880 1b8e72ece5d38e0ccbcd8fa78af85df5 332 SUPERFAMILY SSF56112 34 331 1.81E-24 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily DA442_21880 1b8e72ece5d38e0ccbcd8fa78af85df5 332 Pfam PF02958 Ecdysteroid kinase 177 274 3.8E-10 T 14-10-2018 IPR004119 Protein of unknown function DUF227 DA442_21880 1b8e72ece5d38e0ccbcd8fa78af85df5 332 Pfam PF02958 Ecdysteroid kinase 88 153 1.1E-4 T 14-10-2018 IPR004119 Protein of unknown function DUF227 DA442_21880 1b8e72ece5d38e0ccbcd8fa78af85df5 332 SMART SM00587 119 276 0.0075 T 14-10-2018 IPR015897 CHK kinase-like DA442_21880 1b8e72ece5d38e0ccbcd8fa78af85df5 332 Gene3D G3DSA:3.90.1200.10 131 278 4.7E-7 T 14-10-2018 DA442_13050 659eff55f8ce879bbdd647bd57be182a 142 Pfam PF02657 Fe-S metabolism associated domain 21 139 3.9E-47 T 14-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like DA442_13050 659eff55f8ce879bbdd647bd57be182a 142 SUPERFAMILY SSF82649 4 141 2.46E-50 T 14-10-2018 DA442_13050 659eff55f8ce879bbdd647bd57be182a 142 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 7 141 8.3E-48 T 14-10-2018 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE DA442_13050 659eff55f8ce879bbdd647bd57be182a 142 Gene3D G3DSA:3.90.1010.10 1 142 2.5E-52 T 14-10-2018 DA442_24775 2c76bce8442e3a66bcc86e4226e45036 436 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 10 412 1.8E-155 T 14-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 DA442_24775 2c76bce8442e3a66bcc86e4226e45036 436 Gene3D G3DSA:3.20.140.10 1 427 8.6E-164 T 14-10-2018 DA442_24775 2c76bce8442e3a66bcc86e4226e45036 436 SUPERFAMILY SSF51690 129 409 1.28E-86 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 DA442_24775 2c76bce8442e3a66bcc86e4226e45036 436 PIRSF PIRSF000484 1 396 3.7E-65 T 14-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 DA442_24775 2c76bce8442e3a66bcc86e4226e45036 436 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 7 413 43.823 T 14-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 DA442_24775 2c76bce8442e3a66bcc86e4226e45036 436 SUPERFAMILY SSF54675 8 145 5.0E-34 T 14-10-2018 DA442_24775 2c76bce8442e3a66bcc86e4226e45036 436 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 178 412 9.3E-81 T 14-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 DA442_03370 797497939131bf1685a378c66ac74254 143 SUPERFAMILY SSF54523 17 135 4.81E-18 T 14-10-2018 DA442_03370 797497939131bf1685a378c66ac74254 143 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 15 37 1.6E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DA442_03370 797497939131bf1685a378c66ac74254 143 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 38 122 2.1E-14 T 14-10-2018 IPR031982 Type IV minor pilin ComP DA442_03370 797497939131bf1685a378c66ac74254 143 Gene3D G3DSA:3.30.700.10 18 142 1.4E-20 T 14-10-2018 DA442_03370 797497939131bf1685a378c66ac74254 143 Pfam PF07963 Prokaryotic N-terminal methylation motif 12 37 1.3E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DA442_03370 797497939131bf1685a378c66ac74254 143 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 15 35 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DA442_16390 5759e1bb3ddc4bf85e5360e214cc7519 393 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 208 371 5.5E-50 T 14-10-2018 IPR000160 GGDEF domain DA442_16390 5759e1bb3ddc4bf85e5360e214cc7519 393 Gene3D G3DSA:3.30.70.270 209 376 5.3E-57 T 14-10-2018 DA442_16390 5759e1bb3ddc4bf85e5360e214cc7519 393 SMART SM00267 200 372 1.8E-51 T 14-10-2018 IPR000160 GGDEF domain DA442_16390 5759e1bb3ddc4bf85e5360e214cc7519 393 SUPERFAMILY SSF55785 68 198 3.95E-8 T 14-10-2018 IPR035965 PAS domain superfamily DA442_16390 5759e1bb3ddc4bf85e5360e214cc7519 393 Gene3D G3DSA:3.30.450.20 59 208 8.4E-11 T 14-10-2018 DA442_16390 5759e1bb3ddc4bf85e5360e214cc7519 393 SUPERFAMILY SSF55073 216 371 9.42E-49 T 14-10-2018 IPR029787 Nucleotide cyclase DA442_16390 5759e1bb3ddc4bf85e5360e214cc7519 393 Pfam PF00990 Diguanylate cyclase, GGDEF domain 212 368 3.4E-44 T 14-10-2018 IPR000160 GGDEF domain DA442_25200 348bb6e6360881dffebd2fb55d98ec9c 345 Pfam PF13437 HlyD family secretion protein 226 295 1.0E-5 T 14-10-2018 DA442_25200 348bb6e6360881dffebd2fb55d98ec9c 345 Gene3D G3DSA:2.40.30.170 262 297 1.1E-11 T 14-10-2018 DA442_25200 348bb6e6360881dffebd2fb55d98ec9c 345 Gene3D G3DSA:1.10.287.470 103 226 1.1E-11 T 14-10-2018 DA442_25200 348bb6e6360881dffebd2fb55d98ec9c 345 Gene3D G3DSA:2.40.50.100 72 261 1.1E-11 T 14-10-2018 DA442_22340 67fdd3f5dcd1e52754ffed862a4ebfce 162 Pfam PF06271 RDD family 6 140 1.4E-17 T 14-10-2018 IPR010432 RDD DA442_16365 d61f8146435788019fab47b3bffc1325 295 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 293 34.054 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 DA442_16365 d61f8146435788019fab47b3bffc1325 295 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 293 6.5E-106 T 14-10-2018 DA442_16365 d61f8146435788019fab47b3bffc1325 295 SUPERFAMILY SSF53335 43 274 2.22E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_16365 d61f8146435788019fab47b3bffc1325 295 PIRSF PIRSF000401 1 295 4.6E-101 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 DA442_16365 d61f8146435788019fab47b3bffc1325 295 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 287 4.0E-109 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 DA442_16365 d61f8146435788019fab47b3bffc1325 295 Gene3D G3DSA:3.40.50.150 102 294 2.2E-56 T 14-10-2018 DA442_08430 64ce2784ad07c75b6d9f4277eb69d1e6 277 Pfam PF13509 S1 domain 71 132 6.9E-5 T 14-10-2018 IPR039566 Conserved virulence factor B, S1 domain DA442_08430 64ce2784ad07c75b6d9f4277eb69d1e6 277 Pfam PF13509 S1 domain 4 63 9.9E-24 T 14-10-2018 IPR039566 Conserved virulence factor B, S1 domain DA442_08430 64ce2784ad07c75b6d9f4277eb69d1e6 277 PIRSF PIRSF012524 1 277 2.0E-98 T 14-10-2018 IPR014464 Conserved virulence factor B DA442_08430 64ce2784ad07c75b6d9f4277eb69d1e6 277 SMART SM00316 69 132 6.4 T 14-10-2018 IPR022967 RNA-binding domain, S1 DA442_08430 64ce2784ad07c75b6d9f4277eb69d1e6 277 SMART SM00316 3 64 14.0 T 14-10-2018 IPR022967 RNA-binding domain, S1 DA442_08430 64ce2784ad07c75b6d9f4277eb69d1e6 277 SMART SM00316 145 207 0.14 T 14-10-2018 IPR022967 RNA-binding domain, S1 DA442_08430 64ce2784ad07c75b6d9f4277eb69d1e6 277 Gene3D G3DSA:1.10.10.10 215 277 1.6E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_13590 1dc7cfa584b6b31815fd2000a3174f96 1230 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 783 918 1.3E-15 T 14-10-2018 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN DA442_13590 1dc7cfa584b6b31815fd2000a3174f96 1230 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 1073 1148 2.6E-27 T 14-10-2018 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN DA442_00055 587bd38fa4c69201d2196f1d79fa1092 688 SUPERFAMILY SSF109604 350 489 4.08E-12 T 14-10-2018 DA442_00055 587bd38fa4c69201d2196f1d79fa1092 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 245 260 1.6E-35 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DA442_00055 587bd38fa4c69201d2196f1d79fa1092 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 317 333 1.6E-35 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DA442_00055 587bd38fa4c69201d2196f1d79fa1092 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 1.6E-35 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DA442_00055 587bd38fa4c69201d2196f1d79fa1092 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 1.6E-35 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DA442_00055 587bd38fa4c69201d2196f1d79fa1092 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 49 61 1.6E-35 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DA442_00055 587bd38fa4c69201d2196f1d79fa1092 688 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 549 1.1E-205 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DA442_00055 587bd38fa4c69201d2196f1d79fa1092 688 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 686 25.968 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DA442_00055 587bd38fa4c69201d2196f1d79fa1092 688 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 687 3.6E-297 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DA442_00055 587bd38fa4c69201d2196f1d79fa1092 688 Pfam PF05746 DALR anticodon binding domain 580 677 3.1E-10 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 DA442_03295 146e62b296cc3562b74e72a16ff93029 187 Pfam PF13505 Outer membrane protein beta-barrel domain 10 187 2.9E-24 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel DA442_03295 146e62b296cc3562b74e72a16ff93029 187 Gene3D G3DSA:2.40.160.20 15 187 4.2E-30 T 14-10-2018 DA442_03295 146e62b296cc3562b74e72a16ff93029 187 SUPERFAMILY SSF56925 28 187 4.19E-31 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DA442_14155 6d599686a6242dc5525ea900f1588e6e 161 SUPERFAMILY SSF55083 1 159 1.29E-55 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 DA442_14155 6d599686a6242dc5525ea900f1588e6e 161 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 5.4E-47 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 DA442_14155 6d599686a6242dc5525ea900f1588e6e 161 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 1.7E-38 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 DA442_14155 6d599686a6242dc5525ea900f1588e6e 161 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 DA442_14155 6d599686a6242dc5525ea900f1588e6e 161 Gene3D G3DSA:3.30.70.560 1 159 8.8E-61 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 DA442_00260 9e7e2b6a121b247e868b26a58ed5e738 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 318 8.4E-40 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DA442_00260 9e7e2b6a121b247e868b26a58ed5e738 325 Gene3D G3DSA:1.10.3720.10 84 314 3.8E-20 T 14-10-2018 IPR035906 MetI-like superfamily DA442_00260 9e7e2b6a121b247e868b26a58ed5e738 325 SUPERFAMILY SSF161098 90 302 9.48E-18 T 14-10-2018 IPR035906 MetI-like superfamily DA442_17380 0612d2a068077947239a5e09980172c6 328 SUPERFAMILY SSF56112 5 328 5.23E-91 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily DA442_17380 0612d2a068077947239a5e09980172c6 328 Gene3D G3DSA:1.20.1270.170 149 307 6.3E-124 T 14-10-2018 DA442_17380 0612d2a068077947239a5e09980172c6 328 Gene3D G3DSA:3.30.200.70 13 108 6.3E-124 T 14-10-2018 DA442_17380 0612d2a068077947239a5e09980172c6 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 46.798 T 14-10-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 DA442_17380 0612d2a068077947239a5e09980172c6 328 Pfam PF01636 Phosphotransferase enzyme family 35 256 1.6E-41 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase DA442_17380 0612d2a068077947239a5e09980172c6 328 Gene3D G3DSA:1.10.510.10 60 258 6.3E-124 T 14-10-2018 DA442_16070 7861820a1f1f96bef96feb654283c501 285 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 48 284 8.7E-88 T 14-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 DA442_16070 7861820a1f1f96bef96feb654283c501 285 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 9 285 50.387 T 14-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 DA442_16070 7861820a1f1f96bef96feb654283c501 285 Pfam PF02666 Phosphatidylserine decarboxylase 62 279 7.7E-63 T 14-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 DA442_12605 583f15fb8123d3b3943783e8bc8d0788 147 Pfam PF09842 Predicted membrane protein (DUF2069) 21 123 8.2E-34 T 14-10-2018 IPR018643 Protein of unknown function DUF2069, membrane DA442_09450 44639beb16d739c6b97cc5bb692c2fdc 94 Pfam PF04221 RelB antitoxin 5 44 5.2E-5 T 14-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ DA442_09450 44639beb16d739c6b97cc5bb692c2fdc 94 Gene3D G3DSA:1.10.1220.10 2 73 6.1E-6 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 DA442_25190 a9bd181dd415792bd6ea51d0c939e35c 458 SUPERFAMILY SSF55073 324 414 8.63E-5 T 14-10-2018 IPR029787 Nucleotide cyclase DA442_25190 a9bd181dd415792bd6ea51d0c939e35c 458 Pfam PF00990 Diguanylate cyclase, GGDEF domain 334 416 1.2E-5 T 14-10-2018 IPR000160 GGDEF domain DA442_22930 8c646dd29e249c84f89a323de8bac5a9 395 PIRSF PIRSF016049 1 394 8.7E-177 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 DA442_22930 8c646dd29e249c84f89a323de8bac5a9 395 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 394 9.8E-213 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 DA442_22930 8c646dd29e249c84f89a323de8bac5a9 395 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 389 4.8E-156 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 DA442_22930 8c646dd29e249c84f89a323de8bac5a9 395 SUPERFAMILY SSF51658 1 384 4.32E-79 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily DA442_22930 8c646dd29e249c84f89a323de8bac5a9 395 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 395 223.479 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 DA442_22930 8c646dd29e249c84f89a323de8bac5a9 395 Gene3D G3DSA:3.20.20.150 1 173 2.0E-70 T 14-10-2018 DA442_22930 8c646dd29e249c84f89a323de8bac5a9 395 Gene3D G3DSA:3.20.20.150 174 395 1.8E-79 T 14-10-2018 DA442_06635 0c73a25b8cc70f7c243bb9b5c0b094a8 292 Pfam PF03547 Membrane transport protein 151 284 1.6E-6 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 DA442_02435 63aa821ba699ea9a0ebc3d1d57b9d287 259 Pfam PF01925 Sulfite exporter TauE/SafE 11 246 3.1E-42 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 DA442_14340 a8d1a60fdfbcfeb7cbe75d5fbe5c5e01 153 Pfam PF09335 SNARE associated Golgi protein 56 146 1.3E-9 T 14-10-2018 IPR032816 SNARE associated Golgi protein DA442_14340 a8d1a60fdfbcfeb7cbe75d5fbe5c5e01 153 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 24 136 0.007 T 14-10-2018 IPR020143 Uncharacterised protein family, RP436 DA442_00330 ba28bbb5ab8a43ee000a299d782848fe 174 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 7 162 8.7E-64 T 14-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 DA442_00330 ba28bbb5ab8a43ee000a299d782848fe 174 SUPERFAMILY SSF52540 4 160 1.24E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_00330 ba28bbb5ab8a43ee000a299d782848fe 174 Gene3D G3DSA:3.40.50.300 2 168 8.7E-64 T 14-10-2018 DA442_00330 ba28bbb5ab8a43ee000a299d782848fe 174 Pfam PF01202 Shikimate kinase 13 141 7.8E-14 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 DA442_12405 991410c0da12b5697f6a38786f12faea 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 73 89 5.6E-28 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 DA442_12405 991410c0da12b5697f6a38786f12faea 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 89 102 5.6E-28 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 DA442_12405 991410c0da12b5697f6a38786f12faea 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 102 117 5.6E-28 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 DA442_12405 991410c0da12b5697f6a38786f12faea 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 56 72 5.6E-28 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 DA442_12405 991410c0da12b5697f6a38786f12faea 136 Gene3D G3DSA:2.30.330.10 44 136 4.2E-34 T 14-10-2018 IPR036429 SpoA-like superfamily DA442_12405 991410c0da12b5697f6a38786f12faea 136 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 54 128 1.5E-33 T 14-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 DA442_12405 991410c0da12b5697f6a38786f12faea 136 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 56 126 6.6E-25 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) DA442_12405 991410c0da12b5697f6a38786f12faea 136 SUPERFAMILY SSF101801 54 134 7.32E-25 T 14-10-2018 IPR036429 SpoA-like superfamily DA442_02370 ddcdbb1824fd6258e5c62b4317188a18 490 Gene3D G3DSA:3.40.1190.10 116 330 2.0E-84 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DA442_02370 ddcdbb1824fd6258e5c62b4317188a18 490 Pfam PF08245 Mur ligase middle domain 132 312 2.1E-29 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DA442_02370 ddcdbb1824fd6258e5c62b4317188a18 490 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 27 484 43.849 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DA442_02370 ddcdbb1824fd6258e5c62b4317188a18 490 SUPERFAMILY SSF51984 28 114 6.15E-29 T 14-10-2018 DA442_02370 ddcdbb1824fd6258e5c62b4317188a18 490 Pfam PF01225 Mur ligase family, catalytic domain 30 126 4.2E-28 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 DA442_02370 ddcdbb1824fd6258e5c62b4317188a18 490 SUPERFAMILY SSF53623 113 327 1.01E-72 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DA442_02370 ddcdbb1824fd6258e5c62b4317188a18 490 Gene3D G3DSA:3.90.190.20 331 487 1.3E-49 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DA442_02370 ddcdbb1824fd6258e5c62b4317188a18 490 Gene3D G3DSA:3.40.50.720 28 115 9.1E-34 T 14-10-2018 DA442_02370 ddcdbb1824fd6258e5c62b4317188a18 490 SUPERFAMILY SSF53244 331 479 1.56E-48 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DA442_02370 ddcdbb1824fd6258e5c62b4317188a18 490 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 30 478 7.4E-188 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DA442_02370 ddcdbb1824fd6258e5c62b4317188a18 490 Pfam PF02875 Mur ligase family, glutamate ligase domain 334 422 3.6E-21 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 DA442_01370 8fc5b476d2c98a679fed3aaca576a447 80 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 17.826 T 14-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 DA442_01370 8fc5b476d2c98a679fed3aaca576a447 80 Pfam PF06005 Cell division protein ZapB 1 78 2.0E-25 T 14-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 DA442_01370 8fc5b476d2c98a679fed3aaca576a447 80 Gene3D G3DSA:1.20.5.340 1 79 1.3E-28 T 14-10-2018 DA442_03930 3d563b8f5dae794025d1e6989cfc2357 283 Pfam PF00793 DAHP synthetase I family 10 275 1.0E-69 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 DA442_03930 3d563b8f5dae794025d1e6989cfc2357 283 SUPERFAMILY SSF51569 2 278 3.57E-104 T 14-10-2018 DA442_03930 3d563b8f5dae794025d1e6989cfc2357 283 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 6.2E-116 T 14-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 DA442_03930 3d563b8f5dae794025d1e6989cfc2357 283 Gene3D G3DSA:3.20.20.70 1 283 1.5E-101 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_03930 3d563b8f5dae794025d1e6989cfc2357 283 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 48.166 T 14-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 DA442_24475 18b01ee36f6480b61c4b70aeaab9a87f 276 Gene3D G3DSA:3.90.1200.10 124 269 2.9E-12 T 14-10-2018 DA442_24475 18b01ee36f6480b61c4b70aeaab9a87f 276 Pfam PF01636 Phosphotransferase enzyme family 126 194 2.3E-12 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase DA442_24475 18b01ee36f6480b61c4b70aeaab9a87f 276 SUPERFAMILY SSF56112 18 233 2.12E-31 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily DA442_01055 7c46377d38cf09b2ad94dc7a6e5cf79a 311 Pfam PF05686 Glycosyl transferase family 90 140 286 2.9E-14 T 14-10-2018 IPR006598 Lipopolysaccharide-modifying protein DA442_01055 7c46377d38cf09b2ad94dc7a6e5cf79a 311 SMART SM00672 93 302 2.1E-4 T 14-10-2018 IPR006598 Lipopolysaccharide-modifying protein DA442_15725 9926671780bf2d4cf6522b5b08e7709a 62 Gene3D G3DSA:1.10.10.1100 1 57 8.0E-19 T 14-10-2018 DA442_15725 9926671780bf2d4cf6522b5b08e7709a 62 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 52 1.8E-13 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain DA442_19000 b7daf6fc204a5cba5aa01da12c79ec8c 432 Gene3D G3DSA:3.40.190.10 37 300 5.1E-32 T 14-10-2018 DA442_19000 b7daf6fc204a5cba5aa01da12c79ec8c 432 Gene3D G3DSA:3.40.190.10 135 251 5.1E-32 T 14-10-2018 DA442_19000 b7daf6fc204a5cba5aa01da12c79ec8c 432 SUPERFAMILY SSF53850 32 296 3.12E-39 T 14-10-2018 DA442_19000 b7daf6fc204a5cba5aa01da12c79ec8c 432 Pfam PF13343 Bacterial extracellular solute-binding protein 83 291 9.5E-21 T 14-10-2018 DA442_14735 0f3f90ad769f92044a5db586d2a19d29 165 SMART SM00731 11 160 6.9E-54 T 14-10-2018 IPR006640 SprT-like DA442_14735 0f3f90ad769f92044a5db586d2a19d29 165 Hamap MF_00746 Protein SprT [sprT]. 7 160 42.576 T 14-10-2018 IPR023483 Uncharacterised protein family SprT DA442_14735 0f3f90ad769f92044a5db586d2a19d29 165 Pfam PF10263 SprT-like family 16 114 2.0E-18 T 14-10-2018 IPR006640 SprT-like DA442_14735 0f3f90ad769f92044a5db586d2a19d29 165 Pfam PF17283 SprT-like zinc ribbon domain 120 160 1.2E-10 T 14-10-2018 IPR035240 SprT-like, zinc ribbon domain DA442_13945 af4fca64d31e192f8b269430f7702e8d 209 Pfam PF01728 FtsJ-like methyltransferase 31 207 1.7E-57 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 DA442_13945 af4fca64d31e192f8b269430f7702e8d 209 SUPERFAMILY SSF53335 30 209 4.75E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_13945 af4fca64d31e192f8b269430f7702e8d 209 PIRSF PIRSF005461 1 209 4.2E-80 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 DA442_13945 af4fca64d31e192f8b269430f7702e8d 209 Gene3D G3DSA:3.40.50.150 30 209 2.1E-60 T 14-10-2018 DA442_13945 af4fca64d31e192f8b269430f7702e8d 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 15 208 28.812 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 DA442_17350 7f7eea5e4e2010daa239e4f005e475a5 214 Pfam PF11355 Protein of unknown function (DUF3157) 22 213 9.2E-78 T 14-10-2018 IPR021501 Protein of unknown function DUF3157 DA442_06060 8d7afca00f0d662b61d5a94bb4aa403f 283 Pfam PF03280 Proteobacterial lipase chaperone protein 85 269 1.8E-40 T 14-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 DA442_06060 8d7afca00f0d662b61d5a94bb4aa403f 283 SUPERFAMILY SSF158855 30 280 5.62E-60 T 14-10-2018 DA442_23840 ca9a4a4bb11165ba31fc3bb75284958d 220 Gene3D G3DSA:1.20.910.10 2 220 1.7E-62 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 DA442_23840 ca9a4a4bb11165ba31fc3bb75284958d 220 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 12 216 2.1E-39 T 14-10-2018 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356 DA442_23840 ca9a4a4bb11165ba31fc3bb75284958d 220 Pfam PF03070 TENA/THI-4/PQQC family 9 217 8.1E-45 T 14-10-2018 IPR004305 Thiaminase-2/PQQC DA442_23840 ca9a4a4bb11165ba31fc3bb75284958d 220 SUPERFAMILY SSF48613 3 216 6.12E-67 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 DA442_07225 ad0baf8aefe127e941c6b1b7ae018f2f 184 Gene3D G3DSA:2.40.160.20 21 184 1.1E-5 T 14-10-2018 DA442_07225 ad0baf8aefe127e941c6b1b7ae018f2f 184 SUPERFAMILY SSF56925 29 184 2.28E-5 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DA442_06975 cf383a2f079be7359d3c4699d7e36101 149 Pfam PF05565 Siphovirus Gp157 2 145 3.7E-20 T 14-10-2018 IPR008840 Siphovirus Gp157 DA442_21425 fb4e292301e1c22eb9ad406ca7851558 161 Gene3D G3DSA:3.10.129.10 2 161 1.4E-43 T 14-10-2018 DA442_21425 fb4e292301e1c22eb9ad406ca7851558 161 Pfam PF03061 Thioesterase superfamily 22 97 8.7E-17 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 DA442_21425 fb4e292301e1c22eb9ad406ca7851558 161 SUPERFAMILY SSF54637 6 150 5.98E-41 T 14-10-2018 IPR029069 HotDog domain superfamily DA442_25695 8bc8548a3fe1cac3d24b609bb863e3a4 423 SUPERFAMILY SSF51735 159 338 3.02E-15 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_25695 8bc8548a3fe1cac3d24b609bb863e3a4 423 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 99 4.7E-6 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DA442_25695 8bc8548a3fe1cac3d24b609bb863e3a4 423 SUPERFAMILY SSF50129 4 189 7.91E-21 T 14-10-2018 IPR011032 GroES-like superfamily DA442_25695 8bc8548a3fe1cac3d24b609bb863e3a4 423 Pfam PF00107 Zinc-binding dehydrogenase 188 327 2.4E-11 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DA442_25695 8bc8548a3fe1cac3d24b609bb863e3a4 423 Gene3D G3DSA:3.90.180.10 16 351 7.2E-36 T 14-10-2018 DA442_25695 8bc8548a3fe1cac3d24b609bb863e3a4 423 Gene3D G3DSA:3.40.50.720 159 320 7.2E-36 T 14-10-2018 DA442_00625 8705835acd91cf01a09d8171d3fac55c 193 Pfam PF13511 Domain of unknown function (DUF4124) 15 68 1.0E-11 T 14-10-2018 IPR025392 Domain of unknown function DUF4124 DA442_16955 9344b9040e3970a06a3db577e94f3184 234 Gene3D G3DSA:3.30.450.40 43 218 9.9E-36 T 14-10-2018 IPR029016 GAF-like domain superfamily DA442_16955 9344b9040e3970a06a3db577e94f3184 234 Pfam PF04340 Protein of unknown function, DUF484 6 216 1.4E-68 T 14-10-2018 IPR007435 Protein of unknown function DUF484 DA442_16750 683c354fb57e2cf1a8ba29ea165c74e2 447 TIGRFAM TIGR00797 matE: MATE efflux family protein 24 418 2.8E-74 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DA442_16750 683c354fb57e2cf1a8ba29ea165c74e2 447 Pfam PF01554 MatE 250 405 1.9E-11 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DA442_16750 683c354fb57e2cf1a8ba29ea165c74e2 447 Pfam PF01554 MatE 24 184 8.9E-25 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DA442_16885 f576f4545dab4556d9d7b335e7802280 164 SUPERFAMILY SSF52799 13 161 6.8E-32 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like DA442_16885 f576f4545dab4556d9d7b335e7802280 164 Gene3D G3DSA:3.90.190.10 5 164 1.3E-31 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like DA442_16885 f576f4545dab4556d9d7b335e7802280 164 Pfam PF05706 Cyclin-dependent kinase inhibitor 3 (CDKN3) 19 128 1.1E-9 T 14-10-2018 IPR022778 CDKN3 domain GO:0004721|GO:0004725 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DA442_16885 f576f4545dab4556d9d7b335e7802280 164 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 109 119 - T 14-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 DA442_01165 4d6f14feaf4ec6311c3889edfd3d42b3 329 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 15 304 1.8E-77 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 DA442_01165 4d6f14feaf4ec6311c3889edfd3d42b3 329 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 13 312 4.3E-109 T 14-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 DA442_01165 4d6f14feaf4ec6311c3889edfd3d42b3 329 PIRSF PIRSF026649 12 313 8.2E-81 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 DA442_01165 4d6f14feaf4ec6311c3889edfd3d42b3 329 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 7 311 48.775 T 14-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 DA442_10290 3cc9facf468afc185ed784206a72742d 89 Gene3D G3DSA:3.30.2310.20 7 89 1.5E-41 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily DA442_10290 3cc9facf468afc185ed784206a72742d 89 SUPERFAMILY SSF143011 8 88 1.22E-28 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily DA442_10290 3cc9facf468afc185ed784206a72742d 89 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 10 89 5.8E-37 T 14-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 DA442_10290 3cc9facf468afc185ed784206a72742d 89 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 10 89 7.0E-44 T 14-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 DA442_09860 d2a1fb5c0c1832571727081c6e268cc9 177 SUPERFAMILY SSF52499 2 168 4.06E-39 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DA442_09860 d2a1fb5c0c1832571727081c6e268cc9 177 Pfam PF00857 Isochorismatase family 3 147 1.6E-32 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 DA442_09860 d2a1fb5c0c1832571727081c6e268cc9 177 Gene3D G3DSA:3.40.50.850 1 162 2.3E-40 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DA442_09845 c90d307b85f5b723b5753ab33e300c22 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 1.3E-14 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_12905 43b55280b10e58fcf8dcc1dab45c8e2e 247 Pfam PF11101 Protein of unknown function (DUF2884) 21 245 4.3E-74 T 14-10-2018 IPR021307 Protein of unknown function DUF2884 DA442_15850 ae1b62c701cc612c1a41c5bba708b949 263 SMART SM01150 3 262 8.3E-120 T 14-10-2018 IPR009770 Domain of unknown function DUF1338 DA442_15850 ae1b62c701cc612c1a41c5bba708b949 263 Gene3D G3DSA:3.10.180.50 3 239 4.2E-94 T 14-10-2018 DA442_15850 ae1b62c701cc612c1a41c5bba708b949 263 Pfam PF07063 Domain of unknown function (DUF1338) 30 261 2.8E-47 T 14-10-2018 IPR009770 Domain of unknown function DUF1338 DA442_13465 5f8070bdeceeee7455a9955dc518396d 100 Gene3D G3DSA:1.10.4000.10 1 98 1.8E-11 T 14-10-2018 IPR036194 Flagellar transcriptional activator FlhD superfamily DA442_13465 5f8070bdeceeee7455a9955dc518396d 100 SUPERFAMILY SSF63592 1 91 3.92E-22 T 14-10-2018 IPR036194 Flagellar transcriptional activator FlhD superfamily DA442_13465 5f8070bdeceeee7455a9955dc518396d 100 ProDom PD015582 ACTIVATOR TRANSCRIPTIONAL TRANSCRIPTION FLAGELLUM FLHD FLAGELLAR DNA-BINDING REGULATION REGULATOR PROBABLE 12 78 0.006 T 14-10-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 DA442_13465 5f8070bdeceeee7455a9955dc518396d 100 Pfam PF05247 Flagellar transcriptional activator (FlhD) 5 79 4.7E-10 T 14-10-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 DA442_22595 3ca3e1cd7c43b5272ddacb7c4862b7a2 182 SUPERFAMILY SSF47413 42 87 5.33E-5 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DA442_22430 658e356f1659c5220e5362c3e95d50ef 146 SMART SM00226 3 145 8.5E-46 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I DA442_22430 658e356f1659c5220e5362c3e95d50ef 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 2.5E-22 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 DA442_22430 658e356f1659c5220e5362c3e95d50ef 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 2.5E-22 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 DA442_22430 658e356f1659c5220e5362c3e95d50ef 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 117 132 2.5E-22 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 DA442_22430 658e356f1659c5220e5362c3e95d50ef 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 2.5E-22 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 DA442_22430 658e356f1659c5220e5362c3e95d50ef 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 101 114 2.5E-22 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 DA442_22430 658e356f1659c5220e5362c3e95d50ef 146 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 142 8.8E-34 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I DA442_22430 658e356f1659c5220e5362c3e95d50ef 146 Gene3D G3DSA:3.40.50.2300 1 146 4.3E-48 T 14-10-2018 DA442_22430 658e356f1659c5220e5362c3e95d50ef 146 SUPERFAMILY SSF52788 1 146 3.92E-38 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily DA442_15130 194fec38834cc6233cff290024197a02 263 Pfam PF02405 Permease MlaE 48 259 7.0E-74 T 14-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 DA442_15130 194fec38834cc6233cff290024197a02 263 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 8 261 4.9E-96 T 14-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria DA442_23815 ca61be1deea9226fc029e913921569cd 364 PIRSF PIRSF000014 1 364 8.5E-163 T 14-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 DA442_23815 ca61be1deea9226fc029e913921569cd 364 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 5 174 3.4E-67 T 14-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal DA442_23815 ca61be1deea9226fc029e913921569cd 364 SUPERFAMILY SSF48695 8 176 1.37E-50 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily DA442_23815 ca61be1deea9226fc029e913921569cd 364 Gene3D G3DSA:1.10.3820.10 2 180 3.8E-36 T 14-10-2018 IPR038266 NapC/NirT cytochrome c superfamily DA442_08265 447cc7454e999af04f28219f921c22c4 324 PIRSF PIRSF000006 1 322 1.4E-111 T 14-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III DA442_08265 447cc7454e999af04f28219f921c22c4 324 Gene3D G3DSA:1.20.58.1490 1 94 1.7E-34 T 14-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily DA442_08265 447cc7454e999af04f28219f921c22c4 324 Gene3D G3DSA:1.10.760.10 209 295 4.7E-74 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_08265 447cc7454e999af04f28219f921c22c4 324 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 240 315 1.0E-10 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_08265 447cc7454e999af04f28219f921c22c4 324 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 154 227 1.1E-13 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_08265 447cc7454e999af04f28219f921c22c4 324 PRINTS PR00605 Class IC cytochrome C signature 293 315 5.1E-6 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 DA442_08265 447cc7454e999af04f28219f921c22c4 324 PRINTS PR00605 Class IC cytochrome C signature 164 175 5.1E-6 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 DA442_08265 447cc7454e999af04f28219f921c22c4 324 Gene3D G3DSA:1.10.760.10 132 318 4.7E-74 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_08265 447cc7454e999af04f28219f921c22c4 324 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 112 321 2.6E-60 T 14-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III DA442_08265 447cc7454e999af04f28219f921c22c4 324 SUPERFAMILY SSF46626 239 321 1.25E-21 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_08265 447cc7454e999af04f28219f921c22c4 324 SUPERFAMILY SSF46626 55 238 8.31E-31 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_08265 447cc7454e999af04f28219f921c22c4 324 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 37 83 3.3E-23 T 14-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal DA442_23500 28309a7dbed3f4ff4a7a79abddcaca87 206 Pfam PF01323 DSBA-like thioredoxin domain 3 182 2.5E-9 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 DA442_23500 28309a7dbed3f4ff4a7a79abddcaca87 206 Gene3D G3DSA:3.40.30.10 1 205 1.7E-42 T 14-10-2018 DA442_23500 28309a7dbed3f4ff4a7a79abddcaca87 206 SUPERFAMILY SSF52833 3 202 2.23E-26 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_23645 28c575d1ef5d8ffdaa136408d3f60fda 392 Gene3D G3DSA:2.10.10.20 349 392 2.4E-18 T 14-10-2018 DA442_23645 28c575d1ef5d8ffdaa136408d3f60fda 392 SUPERFAMILY SSF81296 26 217 3.22E-50 T 14-10-2018 IPR014756 Immunoglobulin E-set DA442_23645 28c575d1ef5d8ffdaa136408d3f60fda 392 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 26 214 2.6E-37 T 14-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal DA442_23645 28c575d1ef5d8ffdaa136408d3f60fda 392 SUPERFAMILY SSF51055 340 389 1.31E-13 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 DA442_23645 28c575d1ef5d8ffdaa136408d3f60fda 392 Gene3D G3DSA:2.70.50.50 26 219 1.6E-64 T 14-10-2018 DA442_23645 28c575d1ef5d8ffdaa136408d3f60fda 392 SMART SM00495 349 392 1.5E-7 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 DA442_00785 42c4c3e12821bc127fca5d69cc5ec46b 626 Gene3D G3DSA:2.40.70.10 216 333 3.4E-7 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily DA442_00785 42c4c3e12821bc127fca5d69cc5ec46b 626 Gene3D G3DSA:2.40.70.10 110 204 1.9E-9 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily DA442_00785 42c4c3e12821bc127fca5d69cc5ec46b 626 Gene3D G3DSA:2.40.70.10 489 611 5.6E-31 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily DA442_00785 42c4c3e12821bc127fca5d69cc5ec46b 626 Pfam PF05618 Putative ATP-dependant zinc protease 499 620 6.8E-24 T 14-10-2018 DA442_00785 42c4c3e12821bc127fca5d69cc5ec46b 626 SUPERFAMILY SSF50630 357 482 3.88E-10 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily DA442_00785 42c4c3e12821bc127fca5d69cc5ec46b 626 SUPERFAMILY SSF50630 491 617 9.15E-32 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily DA442_00785 42c4c3e12821bc127fca5d69cc5ec46b 626 SUPERFAMILY SSF50630 219 340 1.91E-19 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily DA442_00785 42c4c3e12821bc127fca5d69cc5ec46b 626 SUPERFAMILY SSF50630 42 211 8.45E-22 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily DA442_04840 a9fc6aa30351055e81e661c3cc089aac 404 SUPERFAMILY SSF53383 5 400 2.42E-95 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_04840 a9fc6aa30351055e81e661c3cc089aac 404 Gene3D G3DSA:3.90.1150.10 21 398 2.6E-145 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DA442_04840 a9fc6aa30351055e81e661c3cc089aac 404 Pfam PF00155 Aminotransferase class I and II 61 391 2.0E-47 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DA442_04840 a9fc6aa30351055e81e661c3cc089aac 404 Gene3D G3DSA:3.40.640.10 53 294 2.6E-145 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_01470 c15f837e88612bc3571fe866ebb65f44 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 80 25.48 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_01470 c15f837e88612bc3571fe866ebb65f44 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 5 76 2.1E-38 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_01470 c15f837e88612bc3571fe866ebb65f44 84 Gene3D G3DSA:2.40.50.140 1 84 4.1E-38 T 14-10-2018 DA442_01470 c15f837e88612bc3571fe866ebb65f44 84 Pfam PF00366 Ribosomal protein S17 10 77 7.2E-35 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_01470 c15f837e88612bc3571fe866ebb65f44 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 5 76 3.0E-37 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_01470 c15f837e88612bc3571fe866ebb65f44 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 14-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DA442_01470 c15f837e88612bc3571fe866ebb65f44 84 SUPERFAMILY SSF50249 6 83 5.57E-34 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DA442_01470 c15f837e88612bc3571fe866ebb65f44 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 1.4E-14 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_01470 c15f837e88612bc3571fe866ebb65f44 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 1.4E-14 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_01470 c15f837e88612bc3571fe866ebb65f44 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 1.4E-14 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_20305 b50bde339360da120f98c8a45e804088 213 Pfam PF13645 L,D-transpeptidase catalytic domain 50 211 5.5E-66 T 14-10-2018 IPR032676 Putative L,D-transpeptidase tautomerase DA442_17750 43ab0071ace969d7240e2a32ed210832 188 SUPERFAMILY SSF55729 95 177 1.95E-6 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_17750 43ab0071ace969d7240e2a32ed210832 188 Gene3D G3DSA:3.40.630.30 50 180 7.2E-8 T 14-10-2018 DA442_18325 50a5dfaa785bc7d253c7c19c31b677e9 438 Pfam PF13584 Oxygen tolerance 70 299 1.7E-25 T 14-10-2018 IPR025738 Aerotolerance-related protein BatD DA442_14175 3d83a11046616faccaaac59b266831cb 309 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 9 299 1.4E-69 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 DA442_14175 3d83a11046616faccaaac59b266831cb 309 PIRSF PIRSF026649 5 306 7.7E-72 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 DA442_14175 3d83a11046616faccaaac59b266831cb 309 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 6 308 43.419 T 14-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 DA442_14175 3d83a11046616faccaaac59b266831cb 309 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 7 308 1.2E-135 T 14-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 DA442_13000 66d4202dad9f3c2486474466ba9ad5de 219 Gene3D G3DSA:1.10.10.1320 1 103 1.3E-13 T 14-10-2018 DA442_13000 66d4202dad9f3c2486474466ba9ad5de 219 Pfam PF12973 ChrR Cupin-like domain 127 193 6.8E-14 T 14-10-2018 IPR025979 ChrR-like cupin domain DA442_13000 66d4202dad9f3c2486474466ba9ad5de 219 SUPERFAMILY SSF51182 113 203 2.9E-12 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DA442_13000 66d4202dad9f3c2486474466ba9ad5de 219 Gene3D G3DSA:2.60.120.10 108 197 1.4E-24 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DA442_13000 66d4202dad9f3c2486474466ba9ad5de 219 TIGRFAM TIGR02451 anti_sig_ChrR: anti-sigma factor, putative, ChrR family 3 216 1.8E-74 T 14-10-2018 IPR012807 Anti-sigma factor ChrR, putative DA442_11960 08636ebe8e00e7f795b2d8b9b6761900 94 Pfam PF07023 Protein of unknown function (DUF1315) 4 84 1.8E-28 T 14-10-2018 IPR009749 Protein of unknown function DUF1315 DA442_20660 277e713133cb87dd1074b336a4b3984b 677 ProSitePatterns PS00455 Putative AMP-binding domain signature. 289 300 - T 14-10-2018 IPR020845 AMP-binding, conserved site DA442_20660 277e713133cb87dd1074b336a4b3984b 677 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 5 663 7.3E-226 T 14-10-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 DA442_20660 277e713133cb87dd1074b336a4b3984b 677 Gene3D G3DSA:3.40.50.12780 79 539 6.1E-55 T 14-10-2018 DA442_20660 277e713133cb87dd1074b336a4b3984b 677 Gene3D G3DSA:3.30.300.30 544 670 1.5E-14 T 14-10-2018 DA442_20660 277e713133cb87dd1074b336a4b3984b 677 SUPERFAMILY SSF56801 36 662 3.92E-112 T 14-10-2018 DA442_20660 277e713133cb87dd1074b336a4b3984b 677 Pfam PF00501 AMP-binding enzyme 109 544 4.0E-43 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DA442_15265 8a289289bda35a858068c1ae965b40db 298 PIRSF PIRSF038471 2 284 8.8E-83 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 DA442_15265 8a289289bda35a858068c1ae965b40db 298 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 274 3.8E-92 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 DA442_15265 8a289289bda35a858068c1ae965b40db 298 Gene3D G3DSA:2.40.10.340 122 266 4.2E-37 T 14-10-2018 DA442_15265 8a289289bda35a858068c1ae965b40db 298 Gene3D G3DSA:2.40.10.350 180 257 4.2E-37 T 14-10-2018 DA442_15265 8a289289bda35a858068c1ae965b40db 298 Pfam PF04085 rod shape-determining protein MreC 123 269 1.4E-40 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 DA442_21590 4003cff48379e28ca460e1824ea73c7b 454 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 43 426 4.3E-107 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 DA442_21590 4003cff48379e28ca460e1824ea73c7b 454 Pfam PF02386 Cation transport protein 53 437 3.2E-56 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 DA442_22075 fe21f9fed68cf25d181fba905c538a82 251 SMART SM00481 6 80 1.5E-6 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal DA442_22075 fe21f9fed68cf25d181fba905c538a82 251 Gene3D G3DSA:3.20.20.140 3 248 1.8E-61 T 14-10-2018 DA442_22075 fe21f9fed68cf25d181fba905c538a82 251 SUPERFAMILY SSF89550 5 242 2.35E-58 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 DA442_22075 fe21f9fed68cf25d181fba905c538a82 251 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 3 246 52.689 T 14-10-2018 IPR023710 Probable phosphatase YcdX GO:0008270 DA442_12665 59446157424dd911ac0aba0b1f4d7119 168 Gene3D G3DSA:3.30.460.10 1 123 2.3E-10 T 14-10-2018 DA442_12665 59446157424dd911ac0aba0b1f4d7119 168 SUPERFAMILY SSF81301 9 116 1.19E-6 T 14-10-2018 DA442_12665 59446157424dd911ac0aba0b1f4d7119 168 Pfam PF01909 Nucleotidyltransferase domain 11 69 1.3E-4 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 DA442_08090 ab66ad55c43f93c4b9b10f6666d56c73 277 Gene3D G3DSA:3.40.140.10 122 273 3.2E-42 T 14-10-2018 DA442_08090 ab66ad55c43f93c4b9b10f6666d56c73 277 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 11 267 25.942 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 DA442_08090 ab66ad55c43f93c4b9b10f6666d56c73 277 Gene3D G3DSA:3.10.20.10 36 118 1.0E-9 T 14-10-2018 DA442_08090 ab66ad55c43f93c4b9b10f6666d56c73 277 SUPERFAMILY SSF53927 15 266 2.05E-70 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 DA442_08090 ab66ad55c43f93c4b9b10f6666d56c73 277 Pfam PF02634 FdhD/NarQ family 35 266 2.5E-73 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 DA442_08090 ab66ad55c43f93c4b9b10f6666d56c73 277 PIRSF PIRSF015626 2 271 1.1E-97 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 DA442_01890 6e06c51f155672d4654df58b9b1cb05d 602 Gene3D G3DSA:3.40.50.12780 2 317 5.1E-53 T 14-10-2018 DA442_01890 6e06c51f155672d4654df58b9b1cb05d 602 Pfam PF00501 AMP-binding enzyme 14 466 6.1E-100 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DA442_01890 6e06c51f155672d4654df58b9b1cb05d 602 SUPERFAMILY SSF56801 7 596 1.57E-115 T 14-10-2018 DA442_01890 6e06c51f155672d4654df58b9b1cb05d 602 Gene3D G3DSA:3.40.50.12780 318 459 1.4E-33 T 14-10-2018 DA442_01890 6e06c51f155672d4654df58b9b1cb05d 602 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 14-10-2018 IPR020845 AMP-binding, conserved site DA442_18170 b99141e8e2e911c1a86e1bc18fb7bef9 316 Gene3D G3DSA:1.10.3470.10 4 315 2.5E-58 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DA442_18170 b99141e8e2e911c1a86e1bc18fb7bef9 316 Pfam PF01032 FecCD transport family 24 312 4.6E-55 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DA442_18170 b99141e8e2e911c1a86e1bc18fb7bef9 316 SUPERFAMILY SSF81345 6 312 6.15E-59 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DA442_10160 c3d7623bf0a8b931f7954ed5a2bf42b2 100 Gene3D G3DSA:3.30.2310.20 1 96 1.5E-19 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily DA442_10160 c3d7623bf0a8b931f7954ed5a2bf42b2 100 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 3 86 1.9E-7 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family DA442_10160 c3d7623bf0a8b931f7954ed5a2bf42b2 100 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 91 1.4E-18 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family DA442_25700 786317528f12e857aaa406afa39dab6d 172 SUPERFAMILY SSF158668 3 166 1.31E-50 T 14-10-2018 IPR038026 MtlR-like superfamily DA442_25700 786317528f12e857aaa406afa39dab6d 172 Pfam PF05068 Mannitol repressor 4 166 3.3E-50 T 14-10-2018 IPR007761 Mannitol repressor MtlR-like DA442_25700 786317528f12e857aaa406afa39dab6d 172 Gene3D G3DSA:1.20.120.330 1 168 3.2E-48 T 14-10-2018 DA442_13850 0213e05b5926d06a35cd8ad0ccbfcc9a 337 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 DA442_13850 0213e05b5926d06a35cd8ad0ccbfcc9a 337 Pfam PF01136 Peptidase family U32 75 336 1.4E-68 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 DA442_21850 c02a009031cdc0ec3d1cd1ce4a058fa4 579 Gene3D G3DSA:3.40.50.300 296 576 3.3E-64 T 14-10-2018 DA442_21850 c02a009031cdc0ec3d1cd1ce4a058fa4 579 SUPERFAMILY SSF52540 288 527 4.35E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_21850 c02a009031cdc0ec3d1cd1ce4a058fa4 579 ProSitePatterns PS00211 ABC transporters family signature. 433 447 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_21850 c02a009031cdc0ec3d1cd1ce4a058fa4 579 Pfam PF00005 ABC transporter 315 461 1.9E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_21850 c02a009031cdc0ec3d1cd1ce4a058fa4 579 SUPERFAMILY SSF52540 2 235 3.46E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_21850 c02a009031cdc0ec3d1cd1ce4a058fa4 579 Pfam PF12558 ATP-binding cassette cobalt transporter 235 306 4.8E-20 T 14-10-2018 IPR022216 Putative ABC cobalt transporter DA442_21850 c02a009031cdc0ec3d1cd1ce4a058fa4 579 Pfam PF00005 ABC transporter 20 170 6.5E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_21850 c02a009031cdc0ec3d1cd1ce4a058fa4 579 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_21850 c02a009031cdc0ec3d1cd1ce4a058fa4 579 Gene3D G3DSA:3.40.50.300 1 253 1.6E-68 T 14-10-2018 DA442_21850 c02a009031cdc0ec3d1cd1ce4a058fa4 579 SMART SM00382 324 510 5.6E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_21850 c02a009031cdc0ec3d1cd1ce4a058fa4 579 SMART SM00382 29 221 2.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_02195 807416e512c6683d310be118f3dd68f9 216 SUPERFAMILY SSF55811 13 206 3.66E-45 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DA442_02195 807416e512c6683d310be118f3dd68f9 216 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 15 198 7.0E-66 T 14-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 DA442_02195 807416e512c6683d310be118f3dd68f9 216 Pfam PF00293 NUDIX domain 57 175 6.3E-11 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DA442_02195 807416e512c6683d310be118f3dd68f9 216 Gene3D G3DSA:3.90.79.10 1 208 1.8E-64 T 14-10-2018 DA442_02195 807416e512c6683d310be118f3dd68f9 216 ProSitePatterns PS00893 Nudix box signature. 96 117 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DA442_18825 d3d173cc658d10bb8ce25e65d428fd00 334 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 176 2.9E-29 T 14-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase DA442_17375 8b348ebb7e8dbf9192dd57046379fc04 473 Gene3D G3DSA:3.30.70.20 220 292 3.5E-5 T 14-10-2018 DA442_17375 8b348ebb7e8dbf9192dd57046379fc04 473 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 43 471 1.1E-174 T 14-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 DA442_17375 8b348ebb7e8dbf9192dd57046379fc04 473 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 274 285 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DA442_17375 8b348ebb7e8dbf9192dd57046379fc04 473 Pfam PF13746 4Fe-4S dicluster domain 222 326 1.3E-41 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DA442_17375 8b348ebb7e8dbf9192dd57046379fc04 473 Gene3D G3DSA:2.60.40.10 357 473 5.2E-48 T 14-10-2018 IPR013783 Immunoglobulin-like fold DA442_17375 8b348ebb7e8dbf9192dd57046379fc04 473 SUPERFAMILY SSF54862 107 348 4.86E-33 T 14-10-2018 DA442_17375 8b348ebb7e8dbf9192dd57046379fc04 473 Pfam PF12801 4Fe-4S binding domain 97 136 2.3E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DA442_17375 8b348ebb7e8dbf9192dd57046379fc04 473 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 357 470 1.7E-29 T 14-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain DA442_05730 21a29949d36d9a937cb32e625e98bc73 395 Gene3D G3DSA:3.40.640.10 70 295 3.1E-122 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_05730 21a29949d36d9a937cb32e625e98bc73 395 Gene3D G3DSA:3.90.1150.10 54 384 3.1E-122 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DA442_05730 21a29949d36d9a937cb32e625e98bc73 395 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 34 388 6.0E-135 T 14-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 DA442_05730 21a29949d36d9a937cb32e625e98bc73 395 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 244 253 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 DA442_05730 21a29949d36d9a937cb32e625e98bc73 395 SUPERFAMILY SSF53383 16 391 5.79E-98 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_05730 21a29949d36d9a937cb32e625e98bc73 395 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 16 392 45.814 T 14-10-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 DA442_05730 21a29949d36d9a937cb32e625e98bc73 395 Pfam PF00155 Aminotransferase class I and II 54 384 2.5E-51 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DA442_13045 503e9160bf21634862ba5d96442ff58f 306 Pfam PF00990 Diguanylate cyclase, GGDEF domain 142 296 3.5E-43 T 14-10-2018 IPR000160 GGDEF domain DA442_13045 503e9160bf21634862ba5d96442ff58f 306 Gene3D G3DSA:3.30.70.270 141 306 1.2E-49 T 14-10-2018 DA442_13045 503e9160bf21634862ba5d96442ff58f 306 Gene3D G3DSA:3.30.450.20 4 140 3.6E-5 T 14-10-2018 DA442_13045 503e9160bf21634862ba5d96442ff58f 306 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 137 299 1.5E-45 T 14-10-2018 IPR000160 GGDEF domain DA442_13045 503e9160bf21634862ba5d96442ff58f 306 SUPERFAMILY SSF55073 146 302 4.55E-43 T 14-10-2018 IPR029787 Nucleotide cyclase DA442_13045 503e9160bf21634862ba5d96442ff58f 306 SMART SM00267 130 301 3.5E-50 T 14-10-2018 IPR000160 GGDEF domain DA442_17280 9eae6a1419fa79318bfe25bd6f5e1c64 277 SUPERFAMILY SSF53223 6 105 1.38E-30 T 14-10-2018 DA442_17280 9eae6a1419fa79318bfe25bd6f5e1c64 277 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 8 274 1.4E-86 T 14-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 DA442_17280 9eae6a1419fa79318bfe25bd6f5e1c64 277 SUPERFAMILY SSF51735 106 273 6.13E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_17280 9eae6a1419fa79318bfe25bd6f5e1c64 277 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 10 92 2.1E-21 T 14-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 DA442_17280 9eae6a1419fa79318bfe25bd6f5e1c64 277 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 5 273 32.222 T 14-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 DA442_17280 9eae6a1419fa79318bfe25bd6f5e1c64 277 Gene3D G3DSA:3.40.50.10860 8 258 1.4E-84 T 14-10-2018 DA442_17280 9eae6a1419fa79318bfe25bd6f5e1c64 277 Gene3D G3DSA:3.40.50.720 119 239 1.4E-84 T 14-10-2018 DA442_17280 9eae6a1419fa79318bfe25bd6f5e1c64 277 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 120 195 4.0E-15 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase DA442_23535 a95eb25f1dfdf68f77c984010363a186 279 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 5 277 5.1E-124 T 14-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 DA442_23535 a95eb25f1dfdf68f77c984010363a186 279 Gene3D G3DSA:3.40.50.1820 3 278 5.5E-95 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_23535 a95eb25f1dfdf68f77c984010363a186 279 Pfam PF00756 Putative esterase 23 271 1.1E-61 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 DA442_23535 a95eb25f1dfdf68f77c984010363a186 279 SUPERFAMILY SSF53474 3 277 8.51E-91 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_18055 c932f86ec71f4023b72ad92fe23b55c4 350 Gene3D G3DSA:2.60.120.1600 239 342 5.1E-6 T 14-10-2018 DA442_18055 c932f86ec71f4023b72ad92fe23b55c4 350 Pfam PF06863 Protein of unknown function (DUF1254) 54 120 2.0E-7 T 14-10-2018 IPR010679 Domain of unknown function DUF1254 DA442_18055 c932f86ec71f4023b72ad92fe23b55c4 350 SUPERFAMILY SSF160935 2 337 3.66E-50 T 14-10-2018 DA442_25415 d5fac2b50834c169992ec413fe7efe98 435 Pfam PF10923 P-loop Domain of unknown function (DUF2791) 6 407 3.8E-162 T 14-10-2018 IPR021228 Protein of unknown function DUF2791 DA442_25415 d5fac2b50834c169992ec413fe7efe98 435 SUPERFAMILY SSF52540 33 341 6.71E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_01250 f1a1c99a89043b0c8f23ad6aea0ce05e 287 Gene3D G3DSA:3.40.50.11350 145 278 1.3E-6 T 14-10-2018 DA442_01250 f1a1c99a89043b0c8f23ad6aea0ce05e 287 Pfam PF01531 Glycosyl transferase family 11 88 285 6.1E-41 T 14-10-2018 IPR002516 Glycosyl transferase, family 11 GO:0005975|GO:0008107|GO:0016020 MetaCyc: PWY-7831|MetaCyc: PWY-7833 DA442_01355 934f3b199b9b15c2364f859bb209efa4 204 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 46 5.7E-6 T 14-10-2018 DA442_01355 934f3b199b9b15c2364f859bb209efa4 204 Gene3D G3DSA:1.10.10.10 2 85 7.2E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_01355 934f3b199b9b15c2364f859bb209efa4 204 SUPERFAMILY SSF46785 5 183 2.37E-35 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_20570 b42c93954f7232595be3a4702a2c8e96 118 SMART SM00422 1 70 1.6E-25 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DA442_20570 b42c93954f7232595be3a4702a2c8e96 118 SUPERFAMILY SSF46955 1 114 2.64E-32 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DA442_20570 b42c93954f7232595be3a4702a2c8e96 118 Pfam PF13411 MerR HTH family regulatory protein 1 67 4.3E-19 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DA442_20570 b42c93954f7232595be3a4702a2c8e96 118 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.1E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DA442_20570 b42c93954f7232595be3a4702a2c8e96 118 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.1E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DA442_20570 b42c93954f7232595be3a4702a2c8e96 118 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.1E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DA442_20570 b42c93954f7232595be3a4702a2c8e96 118 Gene3D G3DSA:1.10.1660.10 1 118 1.3E-34 T 14-10-2018 DA442_08670 e1ee8690ec6f6c276765008782b9af8d 399 Pfam PF04888 Secretion system effector C (SseC) like family 116 394 1.9E-50 T 14-10-2018 IPR006972 Secretion system effector C, SseC-like GO:0009405 DA442_08475 43f3420783990343aa5cb538c2a0f603 401 SUPERFAMILY SSF161098 193 382 2.09E-23 T 14-10-2018 IPR035906 MetI-like superfamily DA442_08475 43f3420783990343aa5cb538c2a0f603 401 SUPERFAMILY SSF161098 91 162 7.19E-11 T 14-10-2018 IPR035906 MetI-like superfamily DA442_08475 43f3420783990343aa5cb538c2a0f603 401 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 238 396 4.1E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DA442_08475 43f3420783990343aa5cb538c2a0f603 401 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 91 155 1.4E-16 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DA442_08475 43f3420783990343aa5cb538c2a0f603 401 Gene3D G3DSA:1.10.3720.10 79 185 1.4E-13 T 14-10-2018 IPR035906 MetI-like superfamily DA442_08475 43f3420783990343aa5cb538c2a0f603 401 Gene3D G3DSA:1.10.3720.10 189 397 3.7E-31 T 14-10-2018 IPR035906 MetI-like superfamily DA442_12200 8e3cde872dbd6f1fe46489855b437d6b 207 Pfam PF03458 UPF0126 domain 5 76 5.5E-19 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 DA442_12200 8e3cde872dbd6f1fe46489855b437d6b 207 Pfam PF03458 UPF0126 domain 92 163 1.7E-19 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 DA442_21495 dcf725b685e36ca98d5b88c027627394 343 Pfam PF13692 Glycosyl transferases group 1 182 311 1.8E-14 T 14-10-2018 DA442_21495 dcf725b685e36ca98d5b88c027627394 343 Gene3D G3DSA:3.40.50.2000 183 333 5.2E-17 T 14-10-2018 DA442_21495 dcf725b685e36ca98d5b88c027627394 343 Gene3D G3DSA:3.40.50.2000 3 182 3.8E-13 T 14-10-2018 DA442_21495 dcf725b685e36ca98d5b88c027627394 343 SUPERFAMILY SSF53756 1 342 5.76E-38 T 14-10-2018 DA442_21495 dcf725b685e36ca98d5b88c027627394 343 Pfam PF13579 Glycosyl transferase 4-like domain 63 159 9.2E-13 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DA442_20425 e408e715d9a1ecb1adea5379e7c8cb4c 486 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 7 472 5.4E-207 T 14-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 DA442_20425 e408e715d9a1ecb1adea5379e7c8cb4c 486 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 1 486 57.61 T 14-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 DA442_20425 e408e715d9a1ecb1adea5379e7c8cb4c 486 Gene3D G3DSA:3.40.309.10 253 446 3.0E-180 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DA442_20425 e408e715d9a1ecb1adea5379e7c8cb4c 486 Gene3D G3DSA:3.40.605.10 19 474 3.0E-180 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DA442_20425 e408e715d9a1ecb1adea5379e7c8cb4c 486 SUPERFAMILY SSF53720 4 480 8.9E-173 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DA442_20425 e408e715d9a1ecb1adea5379e7c8cb4c 486 Pfam PF00171 Aldehyde dehydrogenase family 18 474 1.1E-178 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DA442_20425 e408e715d9a1ecb1adea5379e7c8cb4c 486 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 246 253 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DA442_20425 e408e715d9a1ecb1adea5379e7c8cb4c 486 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 274 285 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DA442_24725 15c899ab424695a3b9c68d92b304bc62 146 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 144 1.8E-31 T 14-10-2018 IPR002178 PTS EIIA type-2 domain DA442_24725 15c899ab424695a3b9c68d92b304bc62 146 SUPERFAMILY SSF55804 1 144 4.71E-30 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DA442_24725 15c899ab424695a3b9c68d92b304bc62 146 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 6 125 1.1E-30 T 14-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 DA442_24725 15c899ab424695a3b9c68d92b304bc62 146 Gene3D G3DSA:3.40.930.10 1 145 8.0E-32 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DA442_21925 e1bba79940a5ebca80a6d30aac69a059 299 SUPERFAMILY SSF53850 88 292 6.52E-43 T 14-10-2018 DA442_21925 e1bba79940a5ebca80a6d30aac69a059 299 Gene3D G3DSA:1.10.10.10 1 85 6.5E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_21925 e1bba79940a5ebca80a6d30aac69a059 299 Pfam PF03466 LysR substrate binding domain 88 291 8.9E-43 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_21925 e1bba79940a5ebca80a6d30aac69a059 299 Gene3D G3DSA:3.40.190.290 90 292 4.0E-62 T 14-10-2018 DA442_21925 e1bba79940a5ebca80a6d30aac69a059 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 3.7E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_21925 e1bba79940a5ebca80a6d30aac69a059 299 SUPERFAMILY SSF46785 1 87 1.72E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_09025 8f8f046c5e20854f76256d2362f258dc 203 Pfam PF12261 Thermostable hemolysin 18 188 5.3E-61 T 14-10-2018 IPR022050 Thermostable hemolysin DA442_18755 8813d67926ee4c84666faa4d3f879d65 129 Gene3D G3DSA:1.10.287.1080 8 128 2.4E-15 T 14-10-2018 DA442_18755 8813d67926ee4c84666faa4d3f879d65 129 SUPERFAMILY SSF101386 2 104 1.05E-16 T 14-10-2018 DA442_18755 8813d67926ee4c84666faa4d3f879d65 129 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 27 93 1.9E-19 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core DA442_23855 2119bdb0925112e021fcb9eda6d6a1df 252 Pfam PF00005 ABC transporter 26 167 3.9E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_23855 2119bdb0925112e021fcb9eda6d6a1df 252 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_23855 2119bdb0925112e021fcb9eda6d6a1df 252 SMART SM00382 34 214 2.8E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_23855 2119bdb0925112e021fcb9eda6d6a1df 252 SUPERFAMILY SSF52540 7 213 5.18E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_23855 2119bdb0925112e021fcb9eda6d6a1df 252 Gene3D G3DSA:3.40.50.300 7 224 3.5E-55 T 14-10-2018 DA442_23055 7df1bc7cdae977cdc7327789e3a8d6a9 235 Gene3D G3DSA:3.40.605.10 28 200 1.2E-8 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DA442_23055 7df1bc7cdae977cdc7327789e3a8d6a9 235 SUPERFAMILY SSF53720 10 181 2.23E-10 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DA442_18165 57a67984798ed3d7fce342c79aa118ae 311 Pfam PF01032 FecCD transport family 8 306 5.3E-64 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DA442_18165 57a67984798ed3d7fce342c79aa118ae 311 Gene3D G3DSA:1.10.3470.10 1 311 1.3E-62 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DA442_18165 57a67984798ed3d7fce342c79aa118ae 311 SUPERFAMILY SSF81345 4 306 1.23E-63 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DA442_04645 4cea407a07792f6a38eb8ee5296cc37a 148 Gene3D G3DSA:3.10.129.10 9 143 1.9E-24 T 14-10-2018 DA442_04645 4cea407a07792f6a38eb8ee5296cc37a 148 SUPERFAMILY SSF54637 10 143 2.19E-30 T 14-10-2018 IPR029069 HotDog domain superfamily DA442_04645 4cea407a07792f6a38eb8ee5296cc37a 148 Pfam PF13279 Thioesterase-like superfamily 19 124 2.5E-12 T 14-10-2018 DA442_16875 4c9e7d0d09efcd37379caf661e7e2702 126 SUPERFAMILY SSF54403 43 115 9.78E-17 T 14-10-2018 DA442_16875 4c9e7d0d09efcd37379caf661e7e2702 126 Gene3D G3DSA:3.10.450.10 40 119 1.9E-9 T 14-10-2018 DA442_16875 4c9e7d0d09efcd37379caf661e7e2702 126 ProSitePatterns PS00287 Cysteine proteases inhibitors signature. 81 94 - T 14-10-2018 IPR018073 Proteinase inhibitor I25, cystatin, conserved site DA442_16875 4c9e7d0d09efcd37379caf661e7e2702 126 Pfam PF00031 Cystatin domain 45 100 1.0E-8 T 14-10-2018 IPR000010 Cystatin domain GO:0004869 DA442_19935 b9b7bffdf6ead45f6b408b2f2d0d015e 173 SUPERFAMILY SSF50814 8 172 7.17E-49 T 14-10-2018 IPR012674 Calycin DA442_19935 b9b7bffdf6ead45f6b408b2f2d0d015e 173 Gene3D G3DSA:2.40.128.20 11 173 3.3E-51 T 14-10-2018 IPR012674 Calycin DA442_19935 b9b7bffdf6ead45f6b408b2f2d0d015e 173 PRINTS PR01171 Bacterial lipocalin signature 67 76 3.7E-32 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 DA442_19935 b9b7bffdf6ead45f6b408b2f2d0d015e 173 PRINTS PR01171 Bacterial lipocalin signature 101 115 3.7E-32 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 DA442_19935 b9b7bffdf6ead45f6b408b2f2d0d015e 173 PRINTS PR01171 Bacterial lipocalin signature 160 170 3.7E-32 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 DA442_19935 b9b7bffdf6ead45f6b408b2f2d0d015e 173 PRINTS PR01171 Bacterial lipocalin signature 48 64 3.7E-32 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 DA442_19935 b9b7bffdf6ead45f6b408b2f2d0d015e 173 PRINTS PR01171 Bacterial lipocalin signature 31 45 3.7E-32 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 DA442_19935 b9b7bffdf6ead45f6b408b2f2d0d015e 173 PRINTS PR01171 Bacterial lipocalin signature 133 144 3.7E-32 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 DA442_19935 b9b7bffdf6ead45f6b408b2f2d0d015e 173 Pfam PF08212 Lipocalin-like domain 33 171 6.4E-38 T 14-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain DA442_19935 b9b7bffdf6ead45f6b408b2f2d0d015e 173 PIRSF PIRSF036893 1 173 6.7E-45 T 14-10-2018 IPR022271 Lipocalin, ApoD type DA442_00325 847371806ea4d67db995f849c8a31df1 598 Pfam PF00920 Dehydratase family 68 594 7.6E-149 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DA442_00325 847371806ea4d67db995f849c8a31df1 598 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 155 165 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DA442_00325 847371806ea4d67db995f849c8a31df1 598 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 3 596 1.1E-250 T 14-10-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 DA442_00325 847371806ea4d67db995f849c8a31df1 598 SUPERFAMILY SSF143975 3 417 1.16E-131 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DA442_00325 847371806ea4d67db995f849c8a31df1 598 Hamap MF_02094 Phosphogluconate dehydratase [edd]. 2 598 53.422 T 14-10-2018 DA442_00325 847371806ea4d67db995f849c8a31df1 598 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 504 515 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DA442_00325 847371806ea4d67db995f849c8a31df1 598 SUPERFAMILY SSF52016 418 596 4.47E-52 T 14-10-2018 DA442_00325 847371806ea4d67db995f849c8a31df1 598 Gene3D G3DSA:3.50.30.80 418 562 7.2E-48 T 14-10-2018 DA442_19355 c7add3a55bfcdadb6c237c5dcb68663b 117 Pfam PF06950 Protein of unknown function (DUF1293) 1 115 3.8E-73 T 14-10-2018 IPR009712 Vibrio phage Vf33, Vpf117 DA442_13480 70abdd901aac14bd6188547ec7be7a9d 1189 Pfam PF07916 TraG-like protein, N-terminal region 3 456 6.3E-106 T 14-10-2018 IPR012931 TraG-like, N-terminal DA442_05160 c8f6de4be4fd3f98fc420e412257c871 519 Pfam PF04293 SpoVR like protein 26 456 1.7E-177 T 14-10-2018 IPR007390 Sporulation stage V, protein R DA442_23080 611b42313ff2a1405e670ff162cc98ef 211 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 9 211 37.479 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DA442_23080 611b42313ff2a1405e670ff162cc98ef 211 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 33 116 6.0E-23 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DA442_23080 611b42313ff2a1405e670ff162cc98ef 211 PIRSF PIRSF000190 1 211 9.5E-81 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DA442_23080 611b42313ff2a1405e670ff162cc98ef 211 SUPERFAMILY SSF50475 11 211 6.17E-64 T 14-10-2018 DA442_23080 611b42313ff2a1405e670ff162cc98ef 211 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 1 211 1.0E-88 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DA442_23080 611b42313ff2a1405e670ff162cc98ef 211 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 181 194 - T 14-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DA442_23080 611b42313ff2a1405e670ff162cc98ef 211 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 171 211 6.6E-19 T 14-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 DA442_23080 611b42313ff2a1405e670ff162cc98ef 211 Gene3D G3DSA:2.30.110.10 13 211 4.1E-75 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 DA442_07835 169710ee3a546d4a1bee1e8523031a91 159 SUPERFAMILY SSF56925 17 158 2.17E-21 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DA442_07835 169710ee3a546d4a1bee1e8523031a91 159 Pfam PF13505 Outer membrane protein beta-barrel domain 5 158 5.7E-19 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel DA442_07835 169710ee3a546d4a1bee1e8523031a91 159 Gene3D G3DSA:2.40.160.20 18 159 1.9E-24 T 14-10-2018 DA442_22410 5de60360760c312ced9f2c85144c2a0f 290 Pfam PF01734 Patatin-like phospholipase 7 170 3.0E-14 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 DA442_22410 5de60360760c312ced9f2c85144c2a0f 290 Gene3D G3DSA:3.40.1090.10 86 227 2.4E-7 T 14-10-2018 DA442_22410 5de60360760c312ced9f2c85144c2a0f 290 Gene3D G3DSA:3.40.1090.10 3 85 1.2E-9 T 14-10-2018 DA442_22410 5de60360760c312ced9f2c85144c2a0f 290 SUPERFAMILY SSF52151 5 229 2.88E-33 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DA442_15140 4abbb43ad4f9138fbc24759a92c25f91 321 Gene3D G3DSA:1.20.1420.30 35 308 1.2E-86 T 14-10-2018 DA442_15140 4abbb43ad4f9138fbc24759a92c25f91 321 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 3 311 1.4E-83 T 14-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 DA442_15140 4abbb43ad4f9138fbc24759a92c25f91 321 Pfam PF01699 Sodium/calcium exchanger protein 175 316 3.0E-29 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 DA442_15140 4abbb43ad4f9138fbc24759a92c25f91 321 Pfam PF01699 Sodium/calcium exchanger protein 5 143 3.7E-27 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 DA442_15140 4abbb43ad4f9138fbc24759a92c25f91 321 Gene3D G3DSA:1.20.58.1130 8 206 1.2E-86 T 14-10-2018 DA442_12365 f9ceb44509f52cee5f5f6a49c3a6161c 295 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 22 261 1.6E-22 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 DA442_12365 f9ceb44509f52cee5f5f6a49c3a6161c 295 SUPERFAMILY SSF52540 22 282 1.82E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_12365 f9ceb44509f52cee5f5f6a49c3a6161c 295 PIRSF PIRSF003092 6 287 8.7E-86 T 14-10-2018 IPR025501 ATP binding protein MinD DA442_12365 f9ceb44509f52cee5f5f6a49c3a6161c 295 Gene3D G3DSA:3.40.50.300 22 262 3.3E-59 T 14-10-2018 DA442_19245 284d158108e4f347905ba5b6eaa1ca4c 399 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 3 81 6.0E-34 T 14-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DA442_19245 284d158108e4f347905ba5b6eaa1ca4c 399 SUPERFAMILY SSF51735 42 168 3.92E-5 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_19245 284d158108e4f347905ba5b6eaa1ca4c 399 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 84 319 3.2E-99 T 14-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DA442_19245 284d158108e4f347905ba5b6eaa1ca4c 399 Pfam PF07055 Enoyl reductase FAD binding domain 326 389 1.1E-24 T 14-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DA442_19245 284d158108e4f347905ba5b6eaa1ca4c 399 Gene3D G3DSA:3.40.50.720 1 397 5.6E-166 T 14-10-2018 DA442_19245 284d158108e4f347905ba5b6eaa1ca4c 399 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 395 52.131 T 14-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DA442_16260 c107260e5b5249f720e0755a59a200bc 172 Pfam PF04186 FxsA cytoplasmic membrane protein 7 114 1.5E-34 T 14-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 DA442_07075 97a46c536b79cec911caab146eba83dc 231 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 104 192 4.9E-11 T 14-10-2018 IPR032871 AHH domain-containing protein DA442_07780 196210dcabfc8f59d3eb32289d528aba 164 Gene3D G3DSA:1.10.3680.10 18 157 2.1E-18 T 14-10-2018 IPR029024 TerB-like DA442_07780 196210dcabfc8f59d3eb32289d528aba 164 Pfam PF05099 Tellurite resistance protein TerB 29 161 2.5E-37 T 14-10-2018 IPR007791 Co-chaperone DjlA, N-terminal DA442_07780 196210dcabfc8f59d3eb32289d528aba 164 SUPERFAMILY SSF158682 19 162 9.16E-28 T 14-10-2018 IPR029024 TerB-like DA442_19270 5c6fdcd957066ce0b254998a2ca1414b 311 SMART SM00797 27 308 7.9E-140 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B DA442_19270 5c6fdcd957066ce0b254998a2ca1414b 311 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 28 291 7.5E-86 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B DA442_19270 5c6fdcd957066ce0b254998a2ca1414b 311 SUPERFAMILY SSF50891 184 294 6.07E-10 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily DA442_19270 5c6fdcd957066ce0b254998a2ca1414b 311 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 10 292 1.1E-80 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B DA442_19270 5c6fdcd957066ce0b254998a2ca1414b 311 Gene3D G3DSA:2.40.100.10 182 309 1.7E-41 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily DA442_08990 6b33e4ea2dbc76b46a62a0ed7ba7fb70 181 Gene3D G3DSA:3.40.630.30 24 181 1.5E-40 T 14-10-2018 DA442_08990 6b33e4ea2dbc76b46a62a0ed7ba7fb70 181 TIGRFAM TIGR02406 ectoine_EctA: diaminobutyrate acetyltransferase 27 180 3.5E-69 T 14-10-2018 IPR012772 L-2,4-diaminobutyric acid acetyltransferase GO:0019491|GO:0033816 KEGG: 00260+2.3.1.178 DA442_08990 6b33e4ea2dbc76b46a62a0ed7ba7fb70 181 SUPERFAMILY SSF55729 27 146 1.99E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_08990 6b33e4ea2dbc76b46a62a0ed7ba7fb70 181 Pfam PF00583 Acetyltransferase (GNAT) family 61 146 1.0E-14 T 14-10-2018 IPR000182 GNAT domain DA442_17520 465dc0b6747a89be0c097dcb8c2b4bee 144 SUPERFAMILY SSF52218 2 142 5.39E-39 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DA442_17520 465dc0b6747a89be0c097dcb8c2b4bee 144 Pfam PF00258 Flavodoxin 4 136 1.8E-21 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 DA442_17520 465dc0b6747a89be0c097dcb8c2b4bee 144 Gene3D G3DSA:3.40.50.360 1 144 5.7E-44 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DA442_00920 543d5dc8096184c27de04817aa02e3c8 94 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 39 85 1.2E-12 T 14-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 DA442_00920 543d5dc8096184c27de04817aa02e3c8 94 SUPERFAMILY SSF46955 39 91 7.14E-6 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DA442_00920 543d5dc8096184c27de04817aa02e3c8 94 Pfam PF12728 Helix-turn-helix domain 39 89 1.6E-15 T 14-10-2018 DA442_01735 423489fb88b980be9b0f7eb1f87056ca 859 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 134 667 3.5E-75 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DA442_01735 423489fb88b980be9b0f7eb1f87056ca 859 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 32 400 7.7E-126 T 14-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ DA442_01735 423489fb88b980be9b0f7eb1f87056ca 859 Pfam PF11874 Domain of unknown function (DUF3394) 674 853 1.3E-70 T 14-10-2018 IPR021814 Protein of unknown function DUF3394 DA442_16510 ee859aa7e26e363f9e0d15bd5f4ff0f1 243 PIRSF PIRSF028160 6 243 2.6E-127 T 14-10-2018 IPR016872 Uncharacterised conserved protein UCP028160 DA442_16510 ee859aa7e26e363f9e0d15bd5f4ff0f1 243 Pfam PF07356 Protein of unknown function (DUF1481) 45 239 4.9E-58 T 14-10-2018 IPR010858 Protein of unknown function DUF1481 DA442_02440 e626f05074474469d3cce52f107eaa4b 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 60 6.5E-13 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_02440 e626f05074474469d3cce52f107eaa4b 286 SUPERFAMILY SSF53850 90 280 2.53E-17 T 14-10-2018 DA442_02440 e626f05074474469d3cce52f107eaa4b 286 Pfam PF03466 LysR substrate binding domain 90 276 1.4E-15 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_02440 e626f05074474469d3cce52f107eaa4b 286 Gene3D G3DSA:1.10.10.10 4 68 1.9E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_02440 e626f05074474469d3cce52f107eaa4b 286 Gene3D G3DSA:3.40.190.290 117 275 2.5E-8 T 14-10-2018 DA442_02440 e626f05074474469d3cce52f107eaa4b 286 SUPERFAMILY SSF46785 4 83 4.22E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_16325 7cf7686b50870f074125ae31e12dca41 396 PIRSF PIRSF004925 1 385 1.1E-103 T 14-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter DA442_16325 7cf7686b50870f074125ae31e12dca41 396 Gene3D G3DSA:1.20.1250.20 195 383 4.0E-32 T 14-10-2018 DA442_16325 7cf7686b50870f074125ae31e12dca41 396 SUPERFAMILY SSF103473 8 373 1.28E-35 T 14-10-2018 IPR036259 MFS transporter superfamily DA442_16325 7cf7686b50870f074125ae31e12dca41 396 Gene3D G3DSA:1.20.1250.20 2 186 1.6E-17 T 14-10-2018 DA442_16325 7cf7686b50870f074125ae31e12dca41 396 Pfam PF12832 MFS_1 like family 13 361 2.4E-39 T 14-10-2018 IPR024989 Major facilitator superfamily associated domain DA442_02690 2e924bfd5416ac3eb00fd1d37b3afaad 385 SMART SM01154 46 385 2.3E-160 T 14-10-2018 IPR012548 Protein of unknown function DUF1704 DA442_02690 2e924bfd5416ac3eb00fd1d37b3afaad 385 Pfam PF08014 Domain of unknown function (DUF1704) 47 383 2.6E-117 T 14-10-2018 IPR012548 Protein of unknown function DUF1704 DA442_02690 2e924bfd5416ac3eb00fd1d37b3afaad 385 TIGRFAM TIGR02421 QEGLA: conserved hypothetical protein 21 378 1.1E-134 T 14-10-2018 IPR012656 Conserved hypothetical protein CHP02421, QEGLA DA442_16540 7b11ad036bee7863241edfe04e376fde 355 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 DA442_16540 7b11ad036bee7863241edfe04e376fde 355 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 DA442_16540 7b11ad036bee7863241edfe04e376fde 355 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 350 50.787 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 DA442_16540 7b11ad036bee7863241edfe04e376fde 355 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 348 1.0E-139 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 DA442_16540 7b11ad036bee7863241edfe04e376fde 355 Gene3D G3DSA:3.20.20.210 1 355 3.6E-159 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 DA442_16540 7b11ad036bee7863241edfe04e376fde 355 SUPERFAMILY SSF51726 1 354 2.27E-123 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 DA442_16540 7b11ad036bee7863241edfe04e376fde 355 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 348 9.1E-142 T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 DA442_22100 1c8442da609ed8cc00bcb40600d7f56c 146 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 8 143 1.0E-29 T 14-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 DA442_22100 1c8442da609ed8cc00bcb40600d7f56c 146 Pfam PF02050 Flagellar FliJ protein 23 133 2.2E-7 T 14-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 DA442_18520 e613e22add088b4615d3953058faafef 197 Pfam PF16964 Putative tight adherence pilin protein F 9 181 2.2E-24 T 14-10-2018 IPR031582 Putative tight adherence pilin protein F DA442_12350 9504d2f6034e7bea578c4ae9b3fe78cc 246 PIRSF PIRSF002884 13 246 4.7E-89 T 14-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 DA442_12350 9504d2f6034e7bea578c4ae9b3fe78cc 246 SUPERFAMILY SSF75708 26 245 7.32E-65 T 14-10-2018 DA442_12350 9504d2f6034e7bea578c4ae9b3fe78cc 246 Pfam PF04344 Chemotaxis phosphatase, CheZ 37 246 2.6E-76 T 14-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 DA442_12350 9504d2f6034e7bea578c4ae9b3fe78cc 246 Gene3D G3DSA:1.10.287.500 55 189 8.4E-46 T 14-10-2018 DA442_17710 15efd335288b3d355eb661e25071b1fc 680 SMART SM00283 417 678 1.2E-62 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_17710 15efd335288b3d355eb661e25071b1fc 680 Gene3D G3DSA:1.10.287.950 349 680 1.6E-65 T 14-10-2018 DA442_17710 15efd335288b3d355eb661e25071b1fc 680 Pfam PF12729 Four helix bundle sensory module for signal transduction 16 176 4.4E-14 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain DA442_17710 15efd335288b3d355eb661e25071b1fc 680 SUPERFAMILY SSF58104 375 679 5.36E-67 T 14-10-2018 DA442_17710 15efd335288b3d355eb661e25071b1fc 680 SMART SM00304 349 402 1.6E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_17710 15efd335288b3d355eb661e25071b1fc 680 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 482 644 1.3E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DA442_17710 15efd335288b3d355eb661e25071b1fc 680 Pfam PF00672 HAMP domain 351 394 2.3E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DA442_22435 fb6445201132d5a0160ba3753bc30ee0 719 Pfam PF13614 AAA domain 536 648 6.5E-12 T 14-10-2018 IPR025669 AAA domain DA442_22435 fb6445201132d5a0160ba3753bc30ee0 719 Gene3D G3DSA:3.40.50.300 441 719 1.4E-77 T 14-10-2018 DA442_22435 fb6445201132d5a0160ba3753bc30ee0 719 Pfam PF02706 Chain length determinant protein 14 106 3.9E-20 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 DA442_22435 fb6445201132d5a0160ba3753bc30ee0 719 SUPERFAMILY SSF52540 524 701 6.24E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_22435 fb6445201132d5a0160ba3753bc30ee0 719 Pfam PF13807 G-rich domain on putative tyrosine kinase 368 449 3.8E-34 T 14-10-2018 IPR032807 Tyrosine kinase, G-rich domain DA442_22435 fb6445201132d5a0160ba3753bc30ee0 719 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 506 710 1.1E-49 T 14-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 DA442_21500 f4140ca9bdc6f2269ded39f5f72b50eb 435 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 349 431 3.2E-7 T 14-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain DA442_21500 f4140ca9bdc6f2269ded39f5f72b50eb 435 Pfam PF01943 Polysaccharide biosynthesis protein 20 297 1.4E-14 T 14-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 DA442_05805 3ae67c425a3ec3d5b97aa73ad881039b 205 Gene3D G3DSA:1.10.3890.10 1 205 1.7E-77 T 14-10-2018 IPR035932 HflD-like superfamily DA442_05805 3ae67c425a3ec3d5b97aa73ad881039b 205 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 203 35.816 T 14-10-2018 IPR007451 High frequency lysogenization protein HflD DA442_05805 3ae67c425a3ec3d5b97aa73ad881039b 205 Pfam PF04356 Protein of unknown function (DUF489) 7 195 1.6E-76 T 14-10-2018 IPR007451 High frequency lysogenization protein HflD DA442_05805 3ae67c425a3ec3d5b97aa73ad881039b 205 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 194 7.0E-107 T 14-10-2018 DA442_05805 3ae67c425a3ec3d5b97aa73ad881039b 205 SUPERFAMILY SSF101322 2 204 6.54E-80 T 14-10-2018 IPR035932 HflD-like superfamily DA442_03325 2cf75295315291f16f1768a18a6c85de 119 Pfam PF04355 SmpA / OmlA family 35 103 2.0E-25 T 14-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 DA442_03325 2cf75295315291f16f1768a18a6c85de 119 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 7 117 32.054 T 14-10-2018 IPR026592 Outer membrane protein assembly factor BamE DA442_03325 2cf75295315291f16f1768a18a6c85de 119 Gene3D G3DSA:3.30.1450.10 34 117 3.0E-25 T 14-10-2018 IPR037873 BamE-like DA442_13135 221d58badd8fd220e4f8d703d1e2d751 98 Gene3D G3DSA:1.10.10.710 21 93 1.1E-7 T 14-10-2018 IPR038627 YebG-like superfamily DA442_13135 221d58badd8fd220e4f8d703d1e2d751 98 Pfam PF07130 YebG protein 1 72 1.8E-31 T 14-10-2018 IPR009813 Uncharacterised protein family YebG DA442_17735 013eb645da748599484e11545a3a1b9d 216 SUPERFAMILY SSF52317 1 215 2.46E-60 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DA442_17735 013eb645da748599484e11545a3a1b9d 216 PIRSF PIRSF006320 1 216 1.9E-107 T 14-10-2018 IPR026041 Glyoxalase ElbB DA442_17735 013eb645da748599484e11545a3a1b9d 216 Gene3D G3DSA:3.40.50.880 1 216 7.6E-88 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DA442_08490 6ad2c917cd3de3dc6ad62b95eefede7d 222 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 216 1.2E-45 T 14-10-2018 IPR006214 Bax inhibitor 1-related DA442_21700 76de48e22443f890e61c3446981d625d 308 Pfam PF01882 Protein of unknown function DUF58 54 138 5.0E-19 T 14-10-2018 IPR002881 Domain of unknown function DUF58 DA442_19120 28bb6bde9a87862fddd23e61a715ef07 80 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 2 75 7.7E-28 T 14-10-2018 IPR018680 Protein of unknown function DUF2164 DA442_17055 8fd64bffe73b355ab1b22e408368a148 89 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 DA442_17055 8fd64bffe73b355ab1b22e408368a148 89 SUPERFAMILY SSF54292 2 87 8.39E-27 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DA442_17055 8fd64bffe73b355ab1b22e408368a148 89 Gene3D G3DSA:3.10.20.30 1 89 8.1E-24 T 14-10-2018 IPR012675 Beta-grasp domain superfamily DA442_17055 8fd64bffe73b355ab1b22e408368a148 89 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 78 7.3E-15 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DA442_08820 5f53a683ff49db84408e146433053352 212 Pfam PF02108 Flagellar assembly protein FliH 75 194 5.0E-17 T 14-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE DA442_08820 5f53a683ff49db84408e146433053352 212 TIGRFAM TIGR02499 HrpE_YscL_not: type III secretion apparatus protein, HrpE/YscL family 19 187 1.3E-41 T 14-10-2018 IPR012842 Type III secretion system HrpE/YscL DA442_01340 5259f467f16d3afcab477167c81860aa 115 SUPERFAMILY SSF55331 2 115 7.02E-34 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily DA442_01340 5259f467f16d3afcab477167c81860aa 115 Gene3D G3DSA:3.30.429.10 1 115 5.4E-33 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily DA442_01340 5259f467f16d3afcab477167c81860aa 115 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 91 4.3E-6 T 14-10-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 DA442_13095 2b27621e7c194e0b3da5db03c1f029df 336 Gene3D G3DSA:3.10.350.10 4 86 3.2E-7 T 14-10-2018 IPR036779 LysM domain superfamily DA442_13095 2b27621e7c194e0b3da5db03c1f029df 336 Pfam PF01476 LysM domain 16 68 9.5E-6 T 14-10-2018 IPR018392 LysM domain DA442_07375 cd633f72f59b41f1b254019920d98f4a 447 Gene3D G3DSA:1.20.1740.10 3 445 2.7E-63 T 14-10-2018 DA442_07375 cd633f72f59b41f1b254019920d98f4a 447 PIRSF PIRSF006060 1 444 1.1E-55 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DA442_07375 cd633f72f59b41f1b254019920d98f4a 447 Hamap MF_02073 Putrescine transporter PotE [potE]. 9 437 31.704 T 14-10-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 DA442_07375 cd633f72f59b41f1b254019920d98f4a 447 Pfam PF13520 Amino acid permease 14 407 2.3E-48 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DA442_03245 d8628f1debd32ca125ffe7d77c1d1a69 378 Pfam PF01764 Lipase (class 3) 73 203 7.4E-22 T 14-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 DA442_03245 d8628f1debd32ca125ffe7d77c1d1a69 378 SUPERFAMILY SSF53474 67 218 8.39E-31 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_03245 d8628f1debd32ca125ffe7d77c1d1a69 378 Gene3D G3DSA:3.40.50.1820 59 269 8.2E-35 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_25350 8ae99f7acaaffd753f43ad3566ff8692 137 Pfam PF02472 Biopolymer transport protein ExbD/TolR 14 134 2.4E-22 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 DA442_15795 5e7d2182a7257a38b9a22ec1106f60a1 193 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 136 2.4E-11 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DA442_15795 5e7d2182a7257a38b9a22ec1106f60a1 193 Gene3D G3DSA:2.40.10.330 71 121 1.5E-58 T 14-10-2018 DA442_15795 5e7d2182a7257a38b9a22ec1106f60a1 193 Gene3D G3DSA:3.10.50.40 3 154 1.5E-58 T 14-10-2018 DA442_15795 5e7d2182a7257a38b9a22ec1106f60a1 193 SUPERFAMILY SSF54534 2 138 3.14E-34 T 14-10-2018 DA442_06135 fec2e2c7103cacbb6ed3a7704d7dd62a 569 SUPERFAMILY SSF161098 301 541 1.87E-25 T 14-10-2018 IPR035906 MetI-like superfamily DA442_06135 fec2e2c7103cacbb6ed3a7704d7dd62a 569 Gene3D G3DSA:1.10.3720.10 3 279 1.6E-18 T 14-10-2018 IPR035906 MetI-like superfamily DA442_06135 fec2e2c7103cacbb6ed3a7704d7dd62a 569 Gene3D G3DSA:1.10.3720.10 296 549 2.7E-19 T 14-10-2018 IPR035906 MetI-like superfamily DA442_06135 fec2e2c7103cacbb6ed3a7704d7dd62a 569 SUPERFAMILY SSF161098 5 276 5.12E-24 T 14-10-2018 IPR035906 MetI-like superfamily DA442_18470 dcfbcdac3444a8a1be1128b2ec750897 90 Pfam PF04964 Flp/Fap pilin component 26 73 9.8E-14 T 14-10-2018 IPR007047 Flp/Fap pilin component DA442_18700 3db4606ff222e23b46c467a10982603c 224 SUPERFAMILY SSF55826 70 212 1.09E-29 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DA442_18700 3db4606ff222e23b46c467a10982603c 224 Gene3D G3DSA:3.90.960.10 68 215 1.7E-39 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DA442_18700 3db4606ff222e23b46c467a10982603c 224 Pfam PF04073 Aminoacyl-tRNA editing domain 99 208 4.3E-19 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 DA442_08260 ef560a6ea607a463d9fa859b4c35eb82 158 Pfam PF05751 FixH 7 147 2.2E-39 T 14-10-2018 IPR008620 Nitrogen fixation protein FixH DA442_01185 ea3f3305cebeba2d36b32de37f249ecb 225 SUPERFAMILY SSF159270 28 223 1.44E-57 T 14-10-2018 IPR023373 YmcC-like superfamily DA442_01185 ea3f3305cebeba2d36b32de37f249ecb 225 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 25 219 6.6E-57 T 14-10-2018 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB DA442_01185 ea3f3305cebeba2d36b32de37f249ecb 225 Gene3D G3DSA:2.40.360.10 26 224 9.3E-59 T 14-10-2018 IPR023373 YmcC-like superfamily DA442_08845 6bde703bc614210cc3c6baf7462889e2 119 Pfam PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) 1 117 1.2E-51 T 14-10-2018 IPR013348 Type III secretion system YscG GO:0009405 DA442_08845 6bde703bc614210cc3c6baf7462889e2 119 Gene3D G3DSA:1.25.40.10 1 117 1.0E-36 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_08845 6bde703bc614210cc3c6baf7462889e2 119 TIGRFAM TIGR02508 type_III_yscG: type III secretion protein, YscG family 1 117 5.3E-53 T 14-10-2018 IPR013348 Type III secretion system YscG GO:0009405 DA442_07625 017a73848903c3c71838eb8c289f6101 441 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 440 6.6E-153 T 14-10-2018 IPR010263 Type VI secretion protein, VC_A0114 DA442_07625 017a73848903c3c71838eb8c289f6101 441 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 439 4.6E-137 T 14-10-2018 IPR010263 Type VI secretion protein, VC_A0114 DA442_04605 57c634d68c1037d2a716a06b8e7dc01a 564 Pfam PF13489 Methyltransferase domain 35 169 1.7E-11 T 14-10-2018 DA442_04605 57c634d68c1037d2a716a06b8e7dc01a 564 SUPERFAMILY SSF53335 7 168 1.86E-26 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_04605 57c634d68c1037d2a716a06b8e7dc01a 564 Gene3D G3DSA:3.40.50.150 1 195 9.1E-25 T 14-10-2018 DA442_04605 57c634d68c1037d2a716a06b8e7dc01a 564 Pfam PF13395 HNH endonuclease 455 493 5.3E-5 T 14-10-2018 IPR003615 HNH nuclease DA442_08700 82fbfeabbdea6c932ad7a6ba5e2474df 114 SUPERFAMILY SSF48452 5 111 6.2E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_08700 82fbfeabbdea6c932ad7a6ba5e2474df 114 Gene3D G3DSA:1.25.40.10 2 113 4.5E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_08700 82fbfeabbdea6c932ad7a6ba5e2474df 114 Pfam PF14559 Tetratricopeptide repeat 19 74 1.1E-9 T 14-10-2018 DA442_08700 82fbfeabbdea6c932ad7a6ba5e2474df 114 PIRSF PIRSF017117 1 112 7.3E-44 T 14-10-2018 IPR016684 Type III secretion system chaperone, YscY DA442_02395 90811434a2f45252235facd4279e5bb4 151 Pfam PF05258 Protein of unknown function (DUF721) 11 85 7.5E-13 T 14-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 DA442_25870 8dc540a3ebe638ebdbc7c9dc03c3b52f 179 SUPERFAMILY SSF110111 55 174 2.75E-47 T 14-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_25870 8dc540a3ebe638ebdbc7c9dc03c3b52f 179 PIRSF PIRSF005413 1 178 1.7E-66 T 14-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_25870 8dc540a3ebe638ebdbc7c9dc03c3b52f 179 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 28 172 1.5E-49 T 14-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_25870 8dc540a3ebe638ebdbc7c9dc03c3b52f 179 Gene3D G3DSA:2.60.370.10 54 177 1.2E-43 T 14-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_01215 84fa633f01adbb590f39706ed547295a 529 SUPERFAMILY SSF53448 23 217 6.22E-6 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DA442_01215 84fa633f01adbb590f39706ed547295a 529 SUPERFAMILY SSF56112 241 438 1.09E-9 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily DA442_01215 84fa633f01adbb590f39706ed547295a 529 Gene3D G3DSA:3.90.550.10 14 220 2.7E-6 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DA442_11090 1cd2480c7b1e6da41a2398fb2bc39459 131 SUPERFAMILY SSF54637 9 129 4.73E-38 T 14-10-2018 IPR029069 HotDog domain superfamily DA442_11090 1cd2480c7b1e6da41a2398fb2bc39459 131 Gene3D G3DSA:3.10.129.10 1 131 1.7E-39 T 14-10-2018 DA442_11090 1cd2480c7b1e6da41a2398fb2bc39459 131 Pfam PF03061 Thioesterase superfamily 26 98 6.9E-20 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 DA442_19775 a1c1f7595c74806dd8716abeefea149f 613 SUPERFAMILY SSF55486 81 230 9.93E-11 T 14-10-2018 DA442_19775 a1c1f7595c74806dd8716abeefea149f 613 Pfam PF05548 Gametolysin peptidase M11 116 247 1.5E-6 T 14-10-2018 IPR008752 Peptidase M11, gametolysin DA442_19775 a1c1f7595c74806dd8716abeefea149f 613 Pfam PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase 410 483 1.3E-7 T 14-10-2018 IPR018905 Alpha-galactosidase, NEW3 domain DA442_19775 a1c1f7595c74806dd8716abeefea149f 613 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 403 430 4.7E-4 T 14-10-2018 IPR001434 Domain of unknown function DUF11 DA442_19775 a1c1f7595c74806dd8716abeefea149f 613 Gene3D G3DSA:3.40.390.10 121 216 6.1E-6 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 DA442_19775 a1c1f7595c74806dd8716abeefea149f 613 Gene3D G3DSA:2.60.40.10 393 503 5.5E-7 T 14-10-2018 IPR013783 Immunoglobulin-like fold DA442_20385 032275fd8b079b7b11e7e8ef9bc23f90 459 SUPERFAMILY SSF141322 389 453 1.06E-8 T 14-10-2018 DA442_20385 032275fd8b079b7b11e7e8ef9bc23f90 459 Pfam PF01957 NfeD-like C-terminal, partner-binding 315 454 3.1E-34 T 14-10-2018 IPR002810 NfeD-like, C-terminal domain DA442_20385 032275fd8b079b7b11e7e8ef9bc23f90 459 Gene3D G3DSA:2.40.50.140 390 459 1.4E-13 T 14-10-2018 DA442_20385 032275fd8b079b7b11e7e8ef9bc23f90 459 SUPERFAMILY SSF52096 6 216 1.84E-27 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DA442_21805 a408f59efcb57eb334277450afb149a3 316 PIRSF PIRSF037004 1 316 4.0E-139 T 14-10-2018 IPR017087 Uncharacterised conserved protein UCP037004 DA442_21805 a408f59efcb57eb334277450afb149a3 316 Pfam PF04463 Protein of unknown function (DUF523) 7 148 1.4E-36 T 14-10-2018 IPR007553 Domain of unknown function DUF523 DA442_21805 a408f59efcb57eb334277450afb149a3 316 Pfam PF08349 Protein of unknown function (DUF1722) 191 307 1.8E-44 T 14-10-2018 IPR013560 Domain of unknown function DUF1722 DA442_23325 29d60bc7fa0b82e60d0b54f0d0e6fbcd 212 SUPERFAMILY SSF51161 50 200 1.39E-41 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily DA442_23325 29d60bc7fa0b82e60d0b54f0d0e6fbcd 212 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 117 145 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DA442_23325 29d60bc7fa0b82e60d0b54f0d0e6fbcd 212 Gene3D G3DSA:2.160.10.10 1 208 1.2E-59 T 14-10-2018 DA442_23325 29d60bc7fa0b82e60d0b54f0d0e6fbcd 212 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 108 143 1.1E-11 T 14-10-2018 IPR001451 Hexapeptide repeat DA442_25835 5a960b4f72cd48752247c4ce6fe1b815 236 Pfam PF03591 AzlC protein 25 163 2.6E-35 T 14-10-2018 IPR011606 Branched-chain amino acid transport, permease DA442_03560 335b787e88fb12fee69b111f3e81292b 132 Pfam PF04241 Protein of unknown function (DUF423) 20 110 1.3E-28 T 14-10-2018 IPR006696 Protein of unknown function DUF423 DA442_15945 ee9568479a083c373f404a27701cb661 61 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 59 1.4E-23 T 14-10-2018 IPR019201 Protein of unknown function DUF2065 DA442_09780 ef6afe2579883d96b4e8e7be48ff2d56 121 Pfam PF16695 Type VI secretion system (T6SS), amidase immunity protein 32 113 1.2E-10 T 14-10-2018 IPR032032 Type VI secretion system (T6SS), amidase immunity protein DA442_09780 ef6afe2579883d96b4e8e7be48ff2d56 121 Gene3D G3DSA:1.20.120.1620 24 120 1.1E-23 T 14-10-2018 IPR038314 T6SS superfamily DA442_18400 f1b96485ebb32464dfbb38d438710021 200 Pfam PF04011 LemA family 11 200 7.5E-68 T 14-10-2018 IPR007156 LemA DA442_18400 f1b96485ebb32464dfbb38d438710021 200 SUPERFAMILY SSF140478 29 186 4.97E-55 T 14-10-2018 IPR023353 LemA-like domain superfamily DA442_18400 f1b96485ebb32464dfbb38d438710021 200 Gene3D G3DSA:1.20.1440.20 19 200 1.6E-62 T 14-10-2018 IPR023353 LemA-like domain superfamily DA442_04950 d4d6c226666279ba575388a3d08c7c4b 191 Gene3D G3DSA:2.40.160.20 12 188 5.9E-10 T 14-10-2018 DA442_04950 d4d6c226666279ba575388a3d08c7c4b 191 Pfam PF13505 Outer membrane protein beta-barrel domain 6 191 8.6E-22 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel DA442_04950 d4d6c226666279ba575388a3d08c7c4b 191 SUPERFAMILY SSF56925 31 191 2.88E-13 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DA442_06360 81646d173d400edb92a86b82f3e6bdd8 306 SUPERFAMILY SSF109604 24 296 7.53E-39 T 14-10-2018 DA442_06360 81646d173d400edb92a86b82f3e6bdd8 306 Gene3D G3DSA:1.10.3210.10 19 299 8.6E-38 T 14-10-2018 DA442_06360 81646d173d400edb92a86b82f3e6bdd8 306 Pfam PF08668 HDOD domain 39 233 5.5E-36 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD DA442_10740 ba56590799ac604e6e92e74d92da5eff 523 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 33 520 7.8E-173 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 DA442_10740 ba56590799ac604e6e92e74d92da5eff 523 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 73 521 7.1E-136 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 DA442_10740 ba56590799ac604e6e92e74d92da5eff 523 ProSitePatterns PS01303 BCCT family of transporters signature. 336 345 - T 14-10-2018 IPR018093 BCCT transporter, conserved site DA442_20110 d6cbf36f72e2629c775467649910a4b9 134 Gene3D G3DSA:3.30.1330.80 2 134 1.1E-46 T 14-10-2018 DA442_20110 d6cbf36f72e2629c775467649910a4b9 134 SUPERFAMILY SSF117856 4 131 1.57E-36 T 14-10-2018 DA442_20110 d6cbf36f72e2629c775467649910a4b9 134 Pfam PF03479 Domain of unknown function (DUF296) 5 110 9.0E-23 T 14-10-2018 IPR005175 PPC domain DA442_10630 2a58d6903658b32364f33259f7ba3f50 454 Pfam PF04715 Anthranilate synthase component I, N terminal region 19 156 6.5E-29 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DA442_10630 2a58d6903658b32364f33259f7ba3f50 454 PRINTS PR00095 Anthranilate synthase component I signature 386 400 9.4E-18 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DA442_10630 2a58d6903658b32364f33259f7ba3f50 454 PRINTS PR00095 Anthranilate synthase component I signature 306 319 9.4E-18 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DA442_10630 2a58d6903658b32364f33259f7ba3f50 454 PRINTS PR00095 Anthranilate synthase component I signature 401 415 9.4E-18 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DA442_10630 2a58d6903658b32364f33259f7ba3f50 454 PRINTS PR00095 Anthranilate synthase component I signature 292 305 9.4E-18 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DA442_10630 2a58d6903658b32364f33259f7ba3f50 454 Pfam PF00425 chorismate binding enzyme 191 444 3.0E-98 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal DA442_10630 2a58d6903658b32364f33259f7ba3f50 454 SUPERFAMILY SSF56322 11 453 3.14E-143 T 14-10-2018 IPR005801 ADC synthase GO:0009058 DA442_10630 2a58d6903658b32364f33259f7ba3f50 454 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 109 445 1.4E-121 T 14-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 DA442_10630 2a58d6903658b32364f33259f7ba3f50 454 Gene3D G3DSA:3.60.120.10 4 454 3.4E-172 T 14-10-2018 IPR005801 ADC synthase GO:0009058 DA442_00890 665edd365ffe0a1992eb8f6110b34cbf 347 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 161 341 5.0E-28 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DA442_00890 665edd365ffe0a1992eb8f6110b34cbf 347 SUPERFAMILY SSF161098 139 325 5.1E-20 T 14-10-2018 IPR035906 MetI-like superfamily DA442_00890 665edd365ffe0a1992eb8f6110b34cbf 347 Gene3D G3DSA:1.10.3720.10 133 339 3.3E-18 T 14-10-2018 IPR035906 MetI-like superfamily DA442_05570 b3a366f6d684ab2c7458edae6ad0dbd2 149 Pfam PF06610 L-alanine exporter 8 142 1.3E-69 T 14-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 DA442_05570 b3a366f6d684ab2c7458edae6ad0dbd2 149 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 15 142 1.0E-69 T 14-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 DA442_05570 b3a366f6d684ab2c7458edae6ad0dbd2 149 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 2 145 31.974 T 14-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 DA442_02995 e922571327f95da52671de0bd4175a8d 258 SUPERFAMILY SSF52540 35 223 8.04E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_02995 e922571327f95da52671de0bd4175a8d 258 Gene3D G3DSA:3.40.50.300 1 240 9.2E-100 T 14-10-2018 DA442_02995 e922571327f95da52671de0bd4175a8d 258 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 3 228 3.0E-115 T 14-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 DA442_02995 e922571327f95da52671de0bd4175a8d 258 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 3 227 2.4E-112 T 14-10-2018 IPR022488 Polyphosphate kinase-2-related DA442_02995 e922571327f95da52671de0bd4175a8d 258 PIRSF PIRSF028756 1 258 6.5E-132 T 14-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 DA442_19375 ab7e1e107bf37b4d18c285e53300cbe5 104 Pfam PF10734 Protein of unknown function (DUF2523) 15 95 7.6E-7 T 14-10-2018 IPR019670 Protein of unkown function DUF2523 DA442_05080 6974776d77cde45939c5ec184cea32bb 179 Gene3D G3DSA:3.40.50.1820 1 179 2.2E-20 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_05080 6974776d77cde45939c5ec184cea32bb 179 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 1.7E-68 T 14-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA DA442_05080 6974776d77cde45939c5ec184cea32bb 179 SUPERFAMILY SSF53474 2 176 1.98E-6 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_05080 6974776d77cde45939c5ec184cea32bb 179 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 48.417 T 14-10-2018 IPR022987 Uncharacterised protein family UPF0227 DA442_19350 58ea9ba0f123a5140829c9d48c202701 402 Pfam PF02486 Replication initiation factor 203 380 2.0E-30 T 14-10-2018 IPR003491 Replication initiation factor GO:0003677|GO:0003916|GO:0006270 DA442_08185 5862092cb434777179b93f9fa69be1f3 345 Pfam PF13416 Bacterial extracellular solute-binding protein 40 311 2.2E-43 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein DA442_08185 5862092cb434777179b93f9fa69be1f3 345 SUPERFAMILY SSF53850 24 341 8.89E-94 T 14-10-2018 DA442_08185 5862092cb434777179b93f9fa69be1f3 345 PIRSF PIRSF019574 1 345 2.2E-125 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DA442_08185 5862092cb434777179b93f9fa69be1f3 345 Gene3D G3DSA:3.40.190.10 129 318 1.7E-121 T 14-10-2018 DA442_08185 5862092cb434777179b93f9fa69be1f3 345 Gene3D G3DSA:3.40.190.10 29 312 1.7E-121 T 14-10-2018 DA442_08185 5862092cb434777179b93f9fa69be1f3 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 30 46 2.5E-85 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DA442_08185 5862092cb434777179b93f9fa69be1f3 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 89 102 2.5E-85 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DA442_08185 5862092cb434777179b93f9fa69be1f3 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 46 67 2.5E-85 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DA442_08185 5862092cb434777179b93f9fa69be1f3 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 290 316 2.5E-85 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DA442_08185 5862092cb434777179b93f9fa69be1f3 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 245 264 2.5E-85 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DA442_08185 5862092cb434777179b93f9fa69be1f3 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 146 160 2.5E-85 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DA442_08185 5862092cb434777179b93f9fa69be1f3 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 120 136 2.5E-85 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DA442_08185 5862092cb434777179b93f9fa69be1f3 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 164 183 2.5E-85 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DA442_08185 5862092cb434777179b93f9fa69be1f3 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 73 87 2.5E-85 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DA442_08185 5862092cb434777179b93f9fa69be1f3 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 201 220 2.5E-85 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DA442_06855 f97cb83e9e524e2249c132f2515ccbc7 426 SUPERFAMILY SSF161098 37 416 5.72E-45 T 14-10-2018 IPR035906 MetI-like superfamily DA442_06855 f97cb83e9e524e2249c132f2515ccbc7 426 Gene3D G3DSA:1.10.3720.10 173 425 6.6E-48 T 14-10-2018 IPR035906 MetI-like superfamily DA442_06855 f97cb83e9e524e2249c132f2515ccbc7 426 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 226 412 2.8E-8 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DA442_22140 1e19ff02fa60288c68aaa38bed424809 272 SUPERFAMILY SSF101801 197 262 2.62E-9 T 14-10-2018 IPR036429 SpoA-like superfamily DA442_22140 1e19ff02fa60288c68aaa38bed424809 272 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 200 261 7.8E-11 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) DA442_02100 82b2ecb72009aa2f24cf802a13d14316 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 14-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_02100 82b2ecb72009aa2f24cf802a13d14316 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.588 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_02100 82b2ecb72009aa2f24cf802a13d14316 71 Pfam PF01165 Ribosomal protein S21 4 56 4.3E-23 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_02100 82b2ecb72009aa2f24cf802a13d14316 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 44 2.0E-10 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_02100 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.6E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_02100 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.6E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_02100 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.6E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_02100 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.6E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_02100 82b2ecb72009aa2f24cf802a13d14316 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 7.2E-25 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_02100 82b2ecb72009aa2f24cf802a13d14316 71 Gene3D G3DSA:1.20.5.1150 16 54 1.4E-21 T 14-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_10835 2d1a12a6e2b39c7a6347330ac7a6d349 177 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 31 169 2.2E-40 T 14-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 DA442_10835 2d1a12a6e2b39c7a6347330ac7a6d349 177 Gene3D G3DSA:3.40.30.10 22 174 4.3E-30 T 14-10-2018 DA442_10835 2d1a12a6e2b39c7a6347330ac7a6d349 177 Pfam PF08534 Redoxin 44 155 1.1E-12 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 DA442_10835 2d1a12a6e2b39c7a6347330ac7a6d349 177 SUPERFAMILY SSF52833 44 174 2.43E-31 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_15370 81e3f33023d4c7bec2e5878c2c798bad 290 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 263 2.5E-125 T 14-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 DA442_15370 81e3f33023d4c7bec2e5878c2c798bad 290 SUPERFAMILY SSF53448 2 271 2.5E-65 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DA442_15370 81e3f33023d4c7bec2e5878c2c798bad 290 Gene3D G3DSA:3.90.550.10 1 278 1.4E-82 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DA442_15370 81e3f33023d4c7bec2e5878c2c798bad 290 Pfam PF00483 Nucleotidyl transferase 9 265 7.3E-32 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 DA442_02695 8a01bdb5de926b5b7c61555de8d49375 382 Pfam PF02690 Na+/Pi-cotransporter 30 150 8.4E-23 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 DA442_02695 8a01bdb5de926b5b7c61555de8d49375 382 Pfam PF02690 Na+/Pi-cotransporter 218 326 2.4E-19 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 DA442_13460 9aab193262b7351ef9bf9a198d6230eb 182 Pfam PF01464 Transglycosylase SLT domain 29 162 9.2E-10 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 DA442_13460 9aab193262b7351ef9bf9a198d6230eb 182 Gene3D G3DSA:1.10.530.10 27 180 2.2E-8 T 14-10-2018 DA442_13460 9aab193262b7351ef9bf9a198d6230eb 182 SUPERFAMILY SSF53955 29 178 1.29E-17 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily DA442_13745 aea282a6112ee6e804f306f4d468a2fd 199 Pfam PF08849 Putative inner membrane protein (DUF1819) 4 184 4.8E-40 T 14-10-2018 IPR014948 Protein of unknown function DUF1819, putative inner membrane DA442_13745 aea282a6112ee6e804f306f4d468a2fd 199 Gene3D G3DSA:1.10.3540.10 1 199 2.6E-54 T 14-10-2018 DA442_05235 5d18c6c9e64c30fbb1210662b439e1a6 225 Gene3D G3DSA:1.10.3720.10 1 218 1.0E-48 T 14-10-2018 IPR035906 MetI-like superfamily DA442_05235 5d18c6c9e64c30fbb1210662b439e1a6 225 SUPERFAMILY SSF161098 11 206 1.96E-40 T 14-10-2018 IPR035906 MetI-like superfamily DA442_05235 5d18c6c9e64c30fbb1210662b439e1a6 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 49 217 1.4E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DA442_05235 5d18c6c9e64c30fbb1210662b439e1a6 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 112 2.8E-22 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DA442_12290 9ec8d8204126a85c24e8ef05923d3d2e 658 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 639 1.4E-126 T 14-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal DA442_12290 9ec8d8204126a85c24e8ef05923d3d2e 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 2.5E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DA442_12290 9ec8d8204126a85c24e8ef05923d3d2e 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 2.5E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DA442_12290 9ec8d8204126a85c24e8ef05923d3d2e 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 2.5E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DA442_12290 9ec8d8204126a85c24e8ef05923d3d2e 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 2.5E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DA442_12290 9ec8d8204126a85c24e8ef05923d3d2e 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 2.5E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DA442_12290 9ec8d8204126a85c24e8ef05923d3d2e 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 2.5E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DA442_12290 9ec8d8204126a85c24e8ef05923d3d2e 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 2.5E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DA442_12290 9ec8d8204126a85c24e8ef05923d3d2e 658 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 2.5E-95 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DA442_12290 9ec8d8204126a85c24e8ef05923d3d2e 658 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 642 2.4E-257 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 DA442_12290 9ec8d8204126a85c24e8ef05923d3d2e 658 Pfam PF01578 Cytochrome C assembly protein 89 297 4.1E-54 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 DA442_12290 9ec8d8204126a85c24e8ef05923d3d2e 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 1.1E-62 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 DA442_12290 9ec8d8204126a85c24e8ef05923d3d2e 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 1.1E-62 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 DA442_12290 9ec8d8204126a85c24e8ef05923d3d2e 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 1.1E-62 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 DA442_12290 9ec8d8204126a85c24e8ef05923d3d2e 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 632 645 1.1E-62 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 DA442_12290 9ec8d8204126a85c24e8ef05923d3d2e 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 1.1E-62 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 DA442_12290 9ec8d8204126a85c24e8ef05923d3d2e 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 1.1E-62 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 DA442_12290 9ec8d8204126a85c24e8ef05923d3d2e 658 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 1.1E-62 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 DA442_16975 47b95659dc49afbc63831932d6ecf8e2 104 SUPERFAMILY SSF55387 1 103 6.63E-39 T 14-10-2018 DA442_16975 47b95659dc49afbc63831932d6ecf8e2 104 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 103 1.6E-42 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DA442_16975 47b95659dc49afbc63831932d6ecf8e2 104 Gene3D G3DSA:3.30.920.10 1 104 2.2E-38 T 14-10-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DA442_16975 47b95659dc49afbc63831932d6ecf8e2 104 SMART SM01219 1 104 4.5E-55 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DA442_16975 47b95659dc49afbc63831932d6ecf8e2 104 ProSitePatterns PS01344 Frataxin family signature. 48 62 - T 14-10-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DA442_16975 47b95659dc49afbc63831932d6ecf8e2 104 Pfam PF01491 Frataxin-like domain 1 100 7.2E-30 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DA442_16975 47b95659dc49afbc63831932d6ecf8e2 104 Hamap MF_00142 Iron-sulfur cluster assembly protein CyaY [cyaY]. 1 103 27.214 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 DA442_11965 48354a19b5b4bce6fb89fd087ac0f634 273 Pfam PF11207 Protein of unknown function (DUF2989) 16 218 1.1E-76 T 14-10-2018 IPR021372 Protein of unknown function DUF2989 DA442_00040 fc8d05ad8946bf0bc01d2fbddc10dd12 145 Gene3D G3DSA:2.60.40.790 34 137 3.3E-23 T 14-10-2018 IPR008978 HSP20-like chaperone DA442_00040 fc8d05ad8946bf0bc01d2fbddc10dd12 145 Pfam PF00011 Hsp20/alpha crystallin family 43 136 3.4E-19 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain DA442_00040 fc8d05ad8946bf0bc01d2fbddc10dd12 145 SUPERFAMILY SSF49764 6 137 4.19E-23 T 14-10-2018 IPR008978 HSP20-like chaperone DA442_24370 095d8749aab19c8dd9492ddb6eef128b 418 Pfam PF03611 PTS system sugar-specific permease component 11 405 9.6E-145 T 14-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 DA442_14665 a0a039387c83674ea0e1c5d861cc2d92 230 Pfam PF04402 Protein of unknown function (DUF541) 29 227 2.2E-41 T 14-10-2018 IPR007497 Protein of unknown function DUF541 DA442_14665 a0a039387c83674ea0e1c5d861cc2d92 230 Gene3D G3DSA:3.30.110.170 31 227 1.0E-48 T 14-10-2018 DA442_14665 a0a039387c83674ea0e1c5d861cc2d92 230 Gene3D G3DSA:3.30.70.2970 41 148 1.0E-48 T 14-10-2018 DA442_12285 5c61fe3e6a6be3d8b1e44214dca3a1c6 184 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 176 6.5E-71 T 14-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 DA442_12285 5c61fe3e6a6be3d8b1e44214dca3a1c6 184 Gene3D G3DSA:3.40.30.10 20 184 3.1E-44 T 14-10-2018 DA442_12285 5c61fe3e6a6be3d8b1e44214dca3a1c6 184 SUPERFAMILY SSF52833 46 178 2.78E-38 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_12285 5c61fe3e6a6be3d8b1e44214dca3a1c6 184 Pfam PF08534 Redoxin 41 164 4.1E-27 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 DA442_12285 5c61fe3e6a6be3d8b1e44214dca3a1c6 184 ProSitePatterns PS00194 Thioredoxin family active site. 71 89 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 DA442_22925 dee0d814b5b4c5e7be00361e559d5f35 412 SMART SM00487 19 212 5.4E-49 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DA442_22925 dee0d814b5b4c5e7be00361e559d5f35 412 Pfam PF00270 DEAD/DEAH box helicase 24 185 4.9E-47 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DA442_22925 dee0d814b5b4c5e7be00361e559d5f35 412 Gene3D G3DSA:3.40.50.300 1 202 1.2E-66 T 14-10-2018 DA442_22925 dee0d814b5b4c5e7be00361e559d5f35 412 SMART SM00490 250 331 7.7E-30 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_22925 dee0d814b5b4c5e7be00361e559d5f35 412 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 145 153 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DA442_22925 dee0d814b5b4c5e7be00361e559d5f35 412 Gene3D G3DSA:3.40.50.300 205 366 1.1E-44 T 14-10-2018 DA442_22925 dee0d814b5b4c5e7be00361e559d5f35 412 SUPERFAMILY SSF52540 68 351 2.38E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_22925 dee0d814b5b4c5e7be00361e559d5f35 412 Pfam PF00271 Helicase conserved C-terminal domain 223 331 7.5E-26 T 14-10-2018 IPR001650 Helicase, C-terminal DA442_00110 8dd2022c7fbbf861daf16c0e3f1e297a 485 PIRSF PIRSF006247 1 485 2.4E-176 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 DA442_00110 8dd2022c7fbbf861daf16c0e3f1e297a 485 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 468 9.6E-118 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 DA442_00110 8dd2022c7fbbf861daf16c0e3f1e297a 485 Pfam PF02386 Cation transport protein 39 477 4.9E-90 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 DA442_24980 f84608806eaefcb5c63a6b84c088ae12 261 Gene3D G3DSA:1.10.3720.10 3 255 2.3E-38 T 14-10-2018 IPR035906 MetI-like superfamily DA442_24980 f84608806eaefcb5c63a6b84c088ae12 261 SUPERFAMILY SSF161098 12 257 1.5E-43 T 14-10-2018 IPR035906 MetI-like superfamily DA442_24980 f84608806eaefcb5c63a6b84c088ae12 261 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 260 3.5E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DA442_23160 51abf1275137a4ccd5a03fb070a12eb2 221 Pfam PF03575 Peptidase family S51 6 196 3.7E-41 T 14-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 DA442_23160 51abf1275137a4ccd5a03fb070a12eb2 221 SUPERFAMILY SSF52317 24 197 4.53E-27 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DA442_23160 51abf1275137a4ccd5a03fb070a12eb2 221 Gene3D G3DSA:3.40.50.880 21 212 3.7E-35 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DA442_05760 6a9416fbf17424094844daa72123e2e9 241 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 129 157 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DA442_05760 6a9416fbf17424094844daa72123e2e9 241 Pfam PF00106 short chain dehydrogenase 4 183 5.2E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_05760 6a9416fbf17424094844daa72123e2e9 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 116 132 2.3E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_05760 6a9416fbf17424094844daa72123e2e9 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 161 2.3E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_05760 6a9416fbf17424094844daa72123e2e9 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.3E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_05760 6a9416fbf17424094844daa72123e2e9 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 180 2.3E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DA442_05760 6a9416fbf17424094844daa72123e2e9 241 Gene3D G3DSA:3.40.50.720 3 215 7.3E-51 T 14-10-2018 DA442_05760 6a9416fbf17424094844daa72123e2e9 241 SUPERFAMILY SSF51735 3 236 1.49E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_08785 809788b91c6b0c27be2fd09baec658f3 152 Pfam PF05932 Tir chaperone protein (CesT) family 7 126 3.3E-27 T 14-10-2018 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 DA442_08785 809788b91c6b0c27be2fd09baec658f3 152 Gene3D G3DSA:3.30.1460.10 1 131 1.4E-19 T 14-10-2018 DA442_08785 809788b91c6b0c27be2fd09baec658f3 152 SUPERFAMILY SSF69635 1 147 6.28E-36 T 14-10-2018 DA442_19125 9506dbb6e0ec2aadfd339341c3eca94c 174 Pfam PF01292 Prokaryotic cytochrome b561 8 173 8.0E-29 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 DA442_19125 9506dbb6e0ec2aadfd339341c3eca94c 174 Gene3D G3DSA:1.20.950.20 2 88 5.8E-7 T 14-10-2018 DA442_19125 9506dbb6e0ec2aadfd339341c3eca94c 174 SUPERFAMILY SSF81342 4 172 1.8E-33 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 DA442_04120 df04199403dbdfbbb881bbc765bcf552 363 Hamap MF_00416 Flagellar P-ring protein [flgI]. 2 363 40.016 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DA442_04120 df04199403dbdfbbb881bbc765bcf552 363 Pfam PF02119 Flagellar P-ring protein 22 362 6.4E-139 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DA442_04120 df04199403dbdfbbb881bbc765bcf552 363 PRINTS PR01010 Flagellar P-ring protein signature 186 204 9.7E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DA442_04120 df04199403dbdfbbb881bbc765bcf552 363 PRINTS PR01010 Flagellar P-ring protein signature 54 69 9.7E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DA442_04120 df04199403dbdfbbb881bbc765bcf552 363 PRINTS PR01010 Flagellar P-ring protein signature 102 119 9.7E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DA442_04120 df04199403dbdfbbb881bbc765bcf552 363 PRINTS PR01010 Flagellar P-ring protein signature 22 37 9.7E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DA442_04120 df04199403dbdfbbb881bbc765bcf552 363 PRINTS PR01010 Flagellar P-ring protein signature 37 52 9.7E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DA442_04120 df04199403dbdfbbb881bbc765bcf552 363 PRINTS PR01010 Flagellar P-ring protein signature 80 99 9.7E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DA442_04120 df04199403dbdfbbb881bbc765bcf552 363 PRINTS PR01010 Flagellar P-ring protein signature 160 178 9.7E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DA442_04120 df04199403dbdfbbb881bbc765bcf552 363 PRINTS PR01010 Flagellar P-ring protein signature 119 137 9.7E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DA442_04120 df04199403dbdfbbb881bbc765bcf552 363 PRINTS PR01010 Flagellar P-ring protein signature 250 262 9.7E-86 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DA442_25820 ba260d9be60eb7a368bff6a2d51df0de 342 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 6.3E-5 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 DA442_25820 ba260d9be60eb7a368bff6a2d51df0de 342 PRINTS PR00183 E.coli/Salmonella-type porin signature 149 171 6.3E-5 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 DA442_25820 ba260d9be60eb7a368bff6a2d51df0de 342 PRINTS PR00183 E.coli/Salmonella-type porin signature 93 115 6.3E-5 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 DA442_25820 ba260d9be60eb7a368bff6a2d51df0de 342 PRINTS PR00183 E.coli/Salmonella-type porin signature 306 325 6.3E-5 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 DA442_25820 ba260d9be60eb7a368bff6a2d51df0de 342 Pfam PF13609 Gram-negative porin 8 325 2.3E-17 T 14-10-2018 DA442_25820 ba260d9be60eb7a368bff6a2d51df0de 342 Gene3D G3DSA:2.40.160.10 22 342 7.0E-56 T 14-10-2018 IPR023614 Porin domain superfamily DA442_25820 ba260d9be60eb7a368bff6a2d51df0de 342 SUPERFAMILY SSF56935 22 341 1.07E-53 T 14-10-2018 DA442_05780 b5b5cde54e2b5fa9388c2dafa01e3678 170 Pfam PF11086 Protein of unknown function (DUF2878) 4 150 1.5E-30 T 14-10-2018 IPR021306 Protein of unknown function DUF2878 DA442_24905 5835993583b81838874fddc502681c7b 131 Pfam PF09622 Putative integral membrane protein (DUF2391) 14 125 1.2E-11 T 14-10-2018 IPR024464 Protein of unknown function DUF2391 DA442_04275 f9cf322abe66815e1a7f926de1b36406 135 SMART SM00116 83 130 2.1E-5 T 14-10-2018 IPR000644 CBS domain DA442_04275 f9cf322abe66815e1a7f926de1b36406 135 SMART SM00116 16 65 11.0 T 14-10-2018 IPR000644 CBS domain DA442_04275 f9cf322abe66815e1a7f926de1b36406 135 Gene3D G3DSA:3.10.580.10 1 134 2.9E-26 T 14-10-2018 DA442_04275 f9cf322abe66815e1a7f926de1b36406 135 Pfam PF00571 CBS domain 78 125 4.7E-10 T 14-10-2018 IPR000644 CBS domain DA442_04275 f9cf322abe66815e1a7f926de1b36406 135 SUPERFAMILY SSF54631 7 126 4.3E-24 T 14-10-2018 DA442_12310 f7332c65e93f804812213a53266fc30b 222 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 8 218 8.0E-92 T 14-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria DA442_12310 f7332c65e93f804812213a53266fc30b 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 29 50 5.2E-70 T 14-10-2018 DA442_12310 f7332c65e93f804812213a53266fc30b 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 103 121 5.2E-70 T 14-10-2018 DA442_12310 f7332c65e93f804812213a53266fc30b 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 78 101 5.2E-70 T 14-10-2018 DA442_12310 f7332c65e93f804812213a53266fc30b 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 158 177 5.2E-70 T 14-10-2018 DA442_12310 f7332c65e93f804812213a53266fc30b 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 55 72 5.2E-70 T 14-10-2018 DA442_12310 f7332c65e93f804812213a53266fc30b 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 195 218 5.2E-70 T 14-10-2018 DA442_12310 f7332c65e93f804812213a53266fc30b 222 Pfam PF03379 CcmB protein 5 219 8.0E-90 T 14-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 DA442_12310 f7332c65e93f804812213a53266fc30b 222 PIRSF PIRSF002764 1 222 5.4E-83 T 14-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria DA442_04045 1a4d857fa8561ee85e407ab2711e57c7 212 PIRSF PIRSF028688 1 212 3.2E-118 T 14-10-2018 IPR014549 Flagellar protein FlgO DA442_02310 29839ade2673979eba288b7f09ed4425 287 PIRSF PIRSF005917 1 286 5.9E-109 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 DA442_02310 29839ade2673979eba288b7f09ed4425 287 SUPERFAMILY SSF53790 12 232 7.46E-86 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 DA442_02310 29839ade2673979eba288b7f09ed4425 287 Gene3D G3DSA:3.40.1010.10 2 120 5.7E-48 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 DA442_02310 29839ade2673979eba288b7f09ed4425 287 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 14-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 DA442_02310 29839ade2673979eba288b7f09ed4425 287 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 213 1.2E-29 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 DA442_02310 29839ade2673979eba288b7f09ed4425 287 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.654 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 DA442_02310 29839ade2673979eba288b7f09ed4425 287 Gene3D G3DSA:3.30.950.10 121 241 1.2E-44 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 DA442_02310 29839ade2673979eba288b7f09ed4425 287 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 284 2.7E-103 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 DA442_25240 85489cd885a93b2eb7cf60e97650c41e 79 Pfam PF04325 Protein of unknown function (DUF465) 29 74 2.0E-10 T 14-10-2018 IPR007420 Protein of unknown function DUF465 DA442_25240 85489cd885a93b2eb7cf60e97650c41e 79 Gene3D G3DSA:1.20.58.660 11 78 9.1E-14 T 14-10-2018 DA442_22550 9e4e45b921b3a96e05c1d7eaee4a82cf 153 Gene3D G3DSA:2.60.40.1890 33 148 1.3E-36 T 14-10-2018 IPR036182 Copper chaperone PCuAC superfamily DA442_22550 9e4e45b921b3a96e05c1d7eaee4a82cf 153 SUPERFAMILY SSF110087 5 145 1.31E-43 T 14-10-2018 IPR036182 Copper chaperone PCuAC superfamily DA442_22550 9e4e45b921b3a96e05c1d7eaee4a82cf 153 Pfam PF04314 Copper chaperone PCu(A)C 31 135 1.3E-35 T 14-10-2018 IPR007410 Copper chaperone PCuAC DA442_20055 a7d61604e9f31634dc803d08814abce7 151 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 9 146 5.9E-51 T 14-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN DA442_20055 a7d61604e9f31634dc803d08814abce7 151 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 14 144 8.6E-41 T 14-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN DA442_20055 a7d61604e9f31634dc803d08814abce7 151 Gene3D G3DSA:2.60.40.4150 26 151 8.9E-40 T 14-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily DA442_08290 8e95d9a41b7e091f6c57464c2e9b4c8e 393 Pfam PF08495 FIST N domain 32 221 1.3E-23 T 14-10-2018 IPR013702 FIST domain, N-terminal DA442_08290 8e95d9a41b7e091f6c57464c2e9b4c8e 393 SMART SM00897 28 222 1.3E-32 T 14-10-2018 IPR013702 FIST domain, N-terminal DA442_08290 8e95d9a41b7e091f6c57464c2e9b4c8e 393 SMART SM01204 223 370 7.2E-28 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 DA442_08290 8e95d9a41b7e091f6c57464c2e9b4c8e 393 Pfam PF10442 FIST C domain 223 369 7.5E-19 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 DA442_01150 90702817c7bc6105327511f4d5948ce4 239 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 2 175 1.1E-32 T 14-10-2018 IPR002654 Glycosyl transferase, family 25 DA442_11300 290fe22c96c9b8a2580f98aef1b3b6d0 1030 SUPERFAMILY SSF50692 881 1003 7.46E-22 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily DA442_11300 290fe22c96c9b8a2580f98aef1b3b6d0 1030 SUPERFAMILY SSF53706 69 883 1.33E-117 T 14-10-2018 DA442_11300 290fe22c96c9b8a2580f98aef1b3b6d0 1030 Pfam PF00384 Molybdopterin oxidoreductase 244 716 2.8E-23 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DA442_11300 290fe22c96c9b8a2580f98aef1b3b6d0 1030 Pfam PF01568 Molydopterin dinucleotide binding domain 904 997 9.5E-11 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 DA442_11300 290fe22c96c9b8a2580f98aef1b3b6d0 1030 Gene3D G3DSA:3.40.50.740 71 989 6.6E-91 T 14-10-2018 DA442_11300 290fe22c96c9b8a2580f98aef1b3b6d0 1030 SMART SM00926 72 154 1.4E-14 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DA442_05370 7a371427c76d7e8441938a3d2ff908b2 196 Pfam PF04993 TfoX N-terminal domain 12 103 2.3E-30 T 14-10-2018 IPR007076 TfoX, N-terminal DA442_05370 7a371427c76d7e8441938a3d2ff908b2 196 SUPERFAMILY SSF159894 5 103 8.37E-31 T 14-10-2018 DA442_05370 7a371427c76d7e8441938a3d2ff908b2 196 Gene3D G3DSA:3.30.1460.30 1 105 9.4E-39 T 14-10-2018 DA442_05370 7a371427c76d7e8441938a3d2ff908b2 196 Pfam PF04994 TfoX C-terminal domain 115 193 4.3E-31 T 14-10-2018 IPR007077 TfoX, C-terminal DA442_05370 7a371427c76d7e8441938a3d2ff908b2 196 PIRSF PIRSF028788 1 196 5.7E-48 T 14-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type DA442_05370 7a371427c76d7e8441938a3d2ff908b2 196 Gene3D G3DSA:1.10.150.20 114 195 4.2E-22 T 14-10-2018 DA442_10595 d0fc8edd58cc0576de34635c7a89d1b8 194 Gene3D G3DSA:3.40.630.30 14 191 4.2E-43 T 14-10-2018 DA442_10595 d0fc8edd58cc0576de34635c7a89d1b8 194 SUPERFAMILY SSF55729 14 185 2.09E-37 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_10595 d0fc8edd58cc0576de34635c7a89d1b8 194 Pfam PF13302 Acetyltransferase (GNAT) domain 17 160 4.0E-17 T 14-10-2018 IPR000182 GNAT domain DA442_18180 2e4fcaf73a25229ded4b195f7639516f 128 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 127 2.0E-63 T 14-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 DA442_18180 2e4fcaf73a25229ded4b195f7639516f 128 Pfam PF13411 MerR HTH family regulatory protein 1 67 1.5E-17 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DA442_18180 2e4fcaf73a25229ded4b195f7639516f 128 SMART SM00422 1 70 1.1E-26 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DA442_18180 2e4fcaf73a25229ded4b195f7639516f 128 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DA442_18180 2e4fcaf73a25229ded4b195f7639516f 128 SUPERFAMILY SSF46955 1 126 1.36E-33 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DA442_18180 2e4fcaf73a25229ded4b195f7639516f 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 2.1E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DA442_18180 2e4fcaf73a25229ded4b195f7639516f 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 2.1E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DA442_18180 2e4fcaf73a25229ded4b195f7639516f 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 2.1E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DA442_18180 2e4fcaf73a25229ded4b195f7639516f 128 Gene3D G3DSA:1.10.1660.10 1 125 1.6E-32 T 14-10-2018 DA442_09590 88dbe026e83e9116d0c270f6b59188da 43 Pfam PF11665 Protein of unknown function (DUF3265) 16 43 5.7E-15 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_05350 4fc255dbe4bccd430eb0c95cc24c9985 485 Gene3D G3DSA:3.40.50.2000 8 481 1.8E-155 T 14-10-2018 DA442_05350 4fc255dbe4bccd430eb0c95cc24c9985 485 SUPERFAMILY SSF53756 4 485 3.77E-109 T 14-10-2018 DA442_05350 4fc255dbe4bccd430eb0c95cc24c9985 485 Hamap MF_00484 Glycogen synthase [glgA]. 6 483 39.25 T 14-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 DA442_05350 4fc255dbe4bccd430eb0c95cc24c9985 485 Pfam PF08323 Starch synthase catalytic domain 8 239 3.1E-66 T 14-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 DA442_05350 4fc255dbe4bccd430eb0c95cc24c9985 485 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 7 482 3.5E-168 T 14-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 DA442_05350 4fc255dbe4bccd430eb0c95cc24c9985 485 Gene3D G3DSA:3.40.50.2000 256 467 1.8E-155 T 14-10-2018 DA442_05350 4fc255dbe4bccd430eb0c95cc24c9985 485 Pfam PF00534 Glycosyl transferases group 1 296 445 1.4E-15 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 DA442_25620 fcfe127bb1dea4ac37eb766ff94ed6ed 366 Pfam PF12698 ABC-2 family transporter protein 25 357 1.8E-45 T 14-10-2018 DA442_25620 fcfe127bb1dea4ac37eb766ff94ed6ed 366 PRINTS PR00164 ABC-2 type transport system membrane protein signature 251 275 6.0E-7 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 DA442_25620 fcfe127bb1dea4ac37eb766ff94ed6ed 366 PRINTS PR00164 ABC-2 type transport system membrane protein signature 288 307 6.0E-7 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 DA442_25620 fcfe127bb1dea4ac37eb766ff94ed6ed 366 PRINTS PR00164 ABC-2 type transport system membrane protein signature 308 327 6.0E-7 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 DA442_22460 8db9d3b4886f39dcbe568d88307f0211 434 SUPERFAMILY SSF118215 9 407 7.19E-121 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 DA442_22460 8db9d3b4886f39dcbe568d88307f0211 434 PRINTS PR00173 Glutamate-aspartate symporter signature 231 250 9.1E-52 T 14-10-2018 DA442_22460 8db9d3b4886f39dcbe568d88307f0211 434 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 9.1E-52 T 14-10-2018 DA442_22460 8db9d3b4886f39dcbe568d88307f0211 434 PRINTS PR00173 Glutamate-aspartate symporter signature 56 76 9.1E-52 T 14-10-2018 DA442_22460 8db9d3b4886f39dcbe568d88307f0211 434 PRINTS PR00173 Glutamate-aspartate symporter signature 86 111 9.1E-52 T 14-10-2018 DA442_22460 8db9d3b4886f39dcbe568d88307f0211 434 PRINTS PR00173 Glutamate-aspartate symporter signature 298 324 9.1E-52 T 14-10-2018 DA442_22460 8db9d3b4886f39dcbe568d88307f0211 434 PRINTS PR00173 Glutamate-aspartate symporter signature 360 380 9.1E-52 T 14-10-2018 DA442_22460 8db9d3b4886f39dcbe568d88307f0211 434 PRINTS PR00173 Glutamate-aspartate symporter signature 196 215 9.1E-52 T 14-10-2018 DA442_22460 8db9d3b4886f39dcbe568d88307f0211 434 PRINTS PR00173 Glutamate-aspartate symporter signature 333 352 9.1E-52 T 14-10-2018 DA442_22460 8db9d3b4886f39dcbe568d88307f0211 434 Gene3D G3DSA:1.10.3860.10 2 413 9.6E-140 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 DA442_22460 8db9d3b4886f39dcbe568d88307f0211 434 Pfam PF00375 Sodium:dicarboxylate symporter family 9 405 3.9E-130 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DA442_21215 9056c794ec0bb07df52984103917fd23 98 SUPERFAMILY SSF81296 11 95 3.17E-15 T 14-10-2018 IPR014756 Immunoglobulin E-set DA442_21215 9056c794ec0bb07df52984103917fd23 98 Gene3D G3DSA:2.60.40.10 6 98 1.2E-18 T 14-10-2018 IPR013783 Immunoglobulin-like fold DA442_21215 9056c794ec0bb07df52984103917fd23 98 Pfam PF16561 Glycogen recognition site of AMP-activated protein kinase 23 94 1.6E-6 T 14-10-2018 IPR032640 AMP-activated protein kinase, glycogen-binding domain Reactome: R-HSA-1445148|Reactome: R-HSA-1632852|Reactome: R-HSA-2151209|Reactome: R-HSA-380972|Reactome: R-HSA-5628897|Reactome: R-HSA-6804756 DA442_21215 9056c794ec0bb07df52984103917fd23 98 SMART SM01065 12 93 7.4E-5 T 14-10-2018 IPR002044 Carbohydrate binding module family 20 GO:2001070 DA442_08525 27e46632b2ebcc0e382e8aa8fc7590f6 452 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 37 444 3.9E-116 T 14-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 DA442_08525 27e46632b2ebcc0e382e8aa8fc7590f6 452 Gene3D G3DSA:1.20.1600.10 37 447 1.9E-78 T 14-10-2018 DA442_08525 27e46632b2ebcc0e382e8aa8fc7590f6 452 SUPERFAMILY SSF56954 12 435 5.62E-89 T 14-10-2018 DA442_08525 27e46632b2ebcc0e382e8aa8fc7590f6 452 Pfam PF02321 Outer membrane efflux protein 249 432 6.5E-26 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DA442_08525 27e46632b2ebcc0e382e8aa8fc7590f6 452 Pfam PF02321 Outer membrane efflux protein 39 227 6.2E-26 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DA442_01955 6bd2e231adb31ca0a1ea20809ed780a6 176 Pfam PF05068 Mannitol repressor 7 170 1.3E-61 T 14-10-2018 IPR007761 Mannitol repressor MtlR-like DA442_01955 6bd2e231adb31ca0a1ea20809ed780a6 176 Gene3D G3DSA:1.20.120.330 1 172 5.7E-72 T 14-10-2018 DA442_01955 6bd2e231adb31ca0a1ea20809ed780a6 176 SUPERFAMILY SSF158668 4 170 4.32E-58 T 14-10-2018 IPR038026 MtlR-like superfamily DA442_20615 a6cafcb5bdd2dacfd7568285c204954f 414 Pfam PF13458 Periplasmic binding protein 27 389 9.2E-66 T 14-10-2018 IPR028081 Leucine-binding protein domain DA442_20615 a6cafcb5bdd2dacfd7568285c204954f 414 SUPERFAMILY SSF53822 25 391 4.37E-54 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DA442_20615 a6cafcb5bdd2dacfd7568285c204954f 414 Gene3D G3DSA:3.40.50.2300 29 381 2.6E-92 T 14-10-2018 DA442_20615 a6cafcb5bdd2dacfd7568285c204954f 414 Gene3D G3DSA:3.40.50.2300 152 383 2.6E-92 T 14-10-2018 DA442_03010 8c4641eda80f5693cf2116e137c84833 203 SUPERFAMILY SSF52833 1 194 5.48E-66 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_03010 8c4641eda80f5693cf2116e137c84833 203 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 193 3.0E-8 T 14-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DA442_03010 8c4641eda80f5693cf2116e137c84833 203 Gene3D G3DSA:3.40.30.10 1 197 4.3E-72 T 14-10-2018 DA442_03010 8c4641eda80f5693cf2116e137c84833 203 PIRSF PIRSF000239 1 201 2.1E-58 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DA442_03010 8c4641eda80f5693cf2116e137c84833 203 Pfam PF00578 AhpC/TSA family 4 139 8.0E-34 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DA442_21285 02bd7e3f6e6394103582a96be3f2af5f 304 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 18 302 5.2E-65 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 DA442_21285 02bd7e3f6e6394103582a96be3f2af5f 304 SUPERFAMILY SSF161111 14 233 7.59E-53 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily DA442_21285 02bd7e3f6e6394103582a96be3f2af5f 304 Gene3D G3DSA:1.20.1510.10 18 232 1.0E-32 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily DA442_21285 02bd7e3f6e6394103582a96be3f2af5f 304 Pfam PF01545 Cation efflux family 22 232 2.9E-38 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 DA442_23605 9970860b7e154aec960a79b75918f019 579 Pfam PF00474 Sodium:solute symporter family 33 415 2.7E-30 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 DA442_23605 9970860b7e154aec960a79b75918f019 579 Gene3D G3DSA:1.20.1730.10 20 496 1.5E-70 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily DA442_08105 b2d4797dd7481e01c3d7178f539e90fc 209 Pfam PF11748 Protein of unknown function (DUF3306) 4 120 6.3E-28 T 14-10-2018 IPR021735 Protein of unknown function DUF3306 DA442_25430 a7ba3e079968b0e0c4e17f9b45f78754 497 SUPERFAMILY SSF56219 76 366 6.81E-17 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DA442_25430 a7ba3e079968b0e0c4e17f9b45f78754 497 Gene3D G3DSA:3.60.10.10 90 365 9.8E-14 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DA442_25430 a7ba3e079968b0e0c4e17f9b45f78754 497 SMART SM00128 94 371 0.0076 T 14-10-2018 IPR000300 Inositol polyphosphate-related phosphatase GO:0046856 DA442_20180 43c6c2a9ad37ffd72694677c039cd8dc 418 Pfam PF03222 Tryptophan/tyrosine permease family 30 406 9.6E-17 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 DA442_10590 5d7ba06ba7bafab41a23adf5028c57a3 195 Gene3D G3DSA:1.10.3210.10 1 195 5.4E-53 T 14-10-2018 DA442_10590 5d7ba06ba7bafab41a23adf5028c57a3 195 Pfam PF13023 HD domain 15 172 8.6E-52 T 14-10-2018 IPR006674 HD domain DA442_10590 5d7ba06ba7bafab41a23adf5028c57a3 195 SUPERFAMILY SSF109604 4 182 2.24E-42 T 14-10-2018 DA442_04760 d19d57231b6ca3a0b786b5599b609eac 224 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 28 180 1.4E-26 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ DA442_08650 d4d283de2557f4259fea848f1dfc339c 508 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 18 444 1.2E-140 T 14-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane DA442_04560 81ea30f2f3e2b0a9e81ddcf0a9f72ff7 87 Gene3D G3DSA:3.30.1070.10 1 84 1.9E-26 T 14-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 DA442_04560 81ea30f2f3e2b0a9e81ddcf0a9f72ff7 87 SUPERFAMILY SSF55229 33 85 3.92E-17 T 14-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 DA442_04560 81ea30f2f3e2b0a9e81ddcf0a9f72ff7 87 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 84 5.2E-34 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 DA442_04560 81ea30f2f3e2b0a9e81ddcf0a9f72ff7 87 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 87 19.086 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 DA442_04560 81ea30f2f3e2b0a9e81ddcf0a9f72ff7 87 Pfam PF03776 Septum formation topological specificity factor MinE 14 83 8.4E-24 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 DA442_00885 887d509487a9266f6585abbf5b0ab4eb 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 132 338 2.3E-34 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DA442_00885 887d509487a9266f6585abbf5b0ab4eb 341 Gene3D G3DSA:1.10.3720.10 102 332 5.4E-19 T 14-10-2018 IPR035906 MetI-like superfamily DA442_00885 887d509487a9266f6585abbf5b0ab4eb 341 SUPERFAMILY SSF161098 107 321 3.01E-16 T 14-10-2018 IPR035906 MetI-like superfamily DA442_23270 3c862ace7ccb5f87034db4d560e3cef4 232 Gene3D G3DSA:3.40.50.300 1 229 1.9E-67 T 14-10-2018 DA442_23270 3c862ace7ccb5f87034db4d560e3cef4 232 Pfam PF00005 ABC transporter 21 169 1.1E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_23270 3c862ace7ccb5f87034db4d560e3cef4 232 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_23270 3c862ace7ccb5f87034db4d560e3cef4 232 SMART SM00382 30 217 1.7E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_23270 3c862ace7ccb5f87034db4d560e3cef4 232 SUPERFAMILY SSF52540 1 223 2.4E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_05940 7a0d3ab09183ed77cea07d26122effb0 78 TIGRFAM TIGR02647 DNA: TIGR02647 family protein 1 77 1.2E-42 T 14-10-2018 IPR013468 Conserved hypothetical protein CHP02647 DA442_05940 7a0d3ab09183ed77cea07d26122effb0 78 Pfam PF06146 Phosphate-starvation-inducible E 8 68 9.6E-11 T 14-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like DA442_22950 d71139605329e4a84e6c496d8ecd4195 433 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 10 422 1.4E-115 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DA442_22950 d71139605329e4a84e6c496d8ecd4195 433 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 20 427 4.4E-138 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DA442_22950 d71139605329e4a84e6c496d8ecd4195 433 PIRSF PIRSF006066 4 433 1.2E-167 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DA442_01175 e1381c75120fec5fbd5958164d6ac891 732 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 33 717 2.7E-252 T 14-10-2018 IPR010344 Exopolysaccharide biosynthesis protein YbjH DA442_14420 28a8795a6a3a496528e5d764b2359514 395 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DA442_14420 28a8795a6a3a496528e5d764b2359514 395 PIRSF PIRSF000726 286 386 0.12 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DA442_14420 28a8795a6a3a496528e5d764b2359514 395 PIRSF PIRSF000726 3 64 4.9E-23 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DA442_14420 28a8795a6a3a496528e5d764b2359514 395 PIRSF PIRSF000726 59 311 1.2E-72 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DA442_14420 28a8795a6a3a496528e5d764b2359514 395 Gene3D G3DSA:3.40.1160.10 4 258 1.2E-85 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DA442_14420 28a8795a6a3a496528e5d764b2359514 395 Pfam PF00696 Amino acid kinase family 5 231 7.8E-52 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DA442_14420 28a8795a6a3a496528e5d764b2359514 395 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 65 379 9.7E-76 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DA442_14420 28a8795a6a3a496528e5d764b2359514 395 SUPERFAMILY SSF53633 6 241 1.2E-73 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DA442_18035 7775bc17326fccfbb1977e078750c642 367 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 337 1.7E-68 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 DA442_18035 7775bc17326fccfbb1977e078750c642 367 Gene3D G3DSA:3.20.20.70 2 366 9.6E-109 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_18035 7775bc17326fccfbb1977e078750c642 367 SUPERFAMILY SSF51395 2 362 7.33E-99 T 14-10-2018 DA442_15810 4071fbc0b9ff9a71fd426d38370cee74 197 Pfam PF02525 Flavodoxin-like fold 10 176 1.0E-41 T 14-10-2018 IPR003680 Flavodoxin-like fold DA442_15810 4071fbc0b9ff9a71fd426d38370cee74 197 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 5 191 49.725 T 14-10-2018 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 DA442_15810 4071fbc0b9ff9a71fd426d38370cee74 197 SUPERFAMILY SSF52218 10 184 1.58E-47 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DA442_15810 4071fbc0b9ff9a71fd426d38370cee74 197 Gene3D G3DSA:3.40.50.360 10 188 2.5E-53 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DA442_20700 7f8f447739aed5a80d90aceb59f153c4 467 Pfam PF00654 Voltage gated chloride channel 87 435 1.0E-94 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 DA442_20700 7f8f447739aed5a80d90aceb59f153c4 467 Hamap MF_01128 H(+)/Cl(-) exchange transporter ClcA [clcA]. 1 467 54.388 T 14-10-2018 IPR023861 Chloride channel, ClcA GO:0005887|GO:0006821|GO:0015108 DA442_20700 7f8f447739aed5a80d90aceb59f153c4 467 Gene3D G3DSA:1.10.3080.10 29 467 6.4E-142 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 DA442_20700 7f8f447739aed5a80d90aceb59f153c4 467 SUPERFAMILY SSF81340 25 451 1.57E-113 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 DA442_20700 7f8f447739aed5a80d90aceb59f153c4 467 PRINTS PR00762 Chloride channel signature 181 200 3.6E-28 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 DA442_20700 7f8f447739aed5a80d90aceb59f153c4 467 PRINTS PR00762 Chloride channel signature 403 422 3.6E-28 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 DA442_20700 7f8f447739aed5a80d90aceb59f153c4 467 PRINTS PR00762 Chloride channel signature 350 370 3.6E-28 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 DA442_20700 7f8f447739aed5a80d90aceb59f153c4 467 PRINTS PR00762 Chloride channel signature 385 401 3.6E-28 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 DA442_20700 7f8f447739aed5a80d90aceb59f153c4 467 PRINTS PR00762 Chloride channel signature 100 117 3.6E-28 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 DA442_16335 123250996b453b72c55eae2a92e9c053 209 SUPERFAMILY SSF53098 26 198 3.32E-35 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DA442_16335 123250996b453b72c55eae2a92e9c053 209 Gene3D G3DSA:3.30.420.10 23 201 2.8E-34 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DA442_16335 123250996b453b72c55eae2a92e9c053 209 Pfam PF00929 Exonuclease 31 193 1.1E-18 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DA442_16335 123250996b453b72c55eae2a92e9c053 209 SMART SM00479 29 202 5.1E-27 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DA442_25325 921fead002bd2b9f4a809e20545cface 99 Pfam PF04175 Protein of unknown function (DUF406) 7 95 7.8E-29 T 14-10-2018 IPR005272 Conserved hypothetical protein CHP00743 DA442_25325 921fead002bd2b9f4a809e20545cface 99 Gene3D G3DSA:3.30.70.860 2 99 3.5E-40 T 14-10-2018 IPR035571 UPF0234-like, C-terminal DA442_18505 a34f90e87212e148f81c8e31fca27d66 288 Pfam PF00482 Type II secretion system (T2SS), protein F 152 278 4.0E-16 T 14-10-2018 IPR018076 Type II secretion system F domain DA442_15045 8cc6d012d8cd6ed211b25521b09dd6e2 134 Pfam PF09834 Predicted membrane protein (DUF2061) 1 52 1.1E-20 T 14-10-2018 IPR018638 Domain of unknown function DUF2061, membrane DA442_15045 8cc6d012d8cd6ed211b25521b09dd6e2 134 Pfam PF09834 Predicted membrane protein (DUF2061) 66 115 2.7E-20 T 14-10-2018 IPR018638 Domain of unknown function DUF2061, membrane DA442_11220 108d250a4a2192d7fb3c3320e80a087e 404 Pfam PF02687 FtsX-like permease family 305 396 2.4E-13 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DA442_11220 108d250a4a2192d7fb3c3320e80a087e 404 Pfam PF12704 MacB-like periplasmic core domain 19 236 1.5E-23 T 14-10-2018 IPR025857 MacB-like periplasmic core domain DA442_23620 7b92b1bd57d287809bec84381c105545 590 Gene3D G3DSA:1.20.1730.10 21 509 6.5E-81 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily DA442_23620 7b92b1bd57d287809bec84381c105545 590 Pfam PF00474 Sodium:solute symporter family 33 422 5.1E-36 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 DA442_12895 b37485643e54aca09681593b38c57d67 454 SUPERFAMILY SSF161070 10 453 7.06E-119 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 DA442_12895 b37485643e54aca09681593b38c57d67 454 Pfam PF00209 Sodium:neurotransmitter symporter family 155 452 2.5E-26 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DA442_12895 b37485643e54aca09681593b38c57d67 454 Pfam PF00209 Sodium:neurotransmitter symporter family 10 133 1.5E-21 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DA442_12895 b37485643e54aca09681593b38c57d67 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 18 39 1.3E-10 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DA442_12895 b37485643e54aca09681593b38c57d67 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 314 333 1.3E-10 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DA442_12895 b37485643e54aca09681593b38c57d67 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 47 66 1.3E-10 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DA442_15930 bfbf2dfc2e294aa33a494a5b5440026a 211 Pfam PF08238 Sel1 repeat 74 106 0.011 T 14-10-2018 IPR006597 Sel1-like repeat DA442_15930 bfbf2dfc2e294aa33a494a5b5440026a 211 Pfam PF08238 Sel1 repeat 109 143 1.3E-4 T 14-10-2018 IPR006597 Sel1-like repeat DA442_15930 bfbf2dfc2e294aa33a494a5b5440026a 211 SUPERFAMILY SSF81901 64 178 3.92E-22 T 14-10-2018 DA442_15930 bfbf2dfc2e294aa33a494a5b5440026a 211 SMART SM00671 144 179 22.0 T 14-10-2018 IPR006597 Sel1-like repeat DA442_15930 bfbf2dfc2e294aa33a494a5b5440026a 211 SMART SM00671 72 107 0.0025 T 14-10-2018 IPR006597 Sel1-like repeat DA442_15930 bfbf2dfc2e294aa33a494a5b5440026a 211 SMART SM00671 108 143 3.2E-5 T 14-10-2018 IPR006597 Sel1-like repeat DA442_15930 bfbf2dfc2e294aa33a494a5b5440026a 211 Gene3D G3DSA:1.25.40.10 23 209 1.5E-25 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_03165 84f5edd39db94c9da79a1cc0c31fb4b8 204 SUPERFAMILY SSF48452 89 188 3.8E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_03165 84f5edd39db94c9da79a1cc0c31fb4b8 204 PIRSF PIRSF006170 1 204 1.5E-53 T 14-10-2018 IPR026039 Uncharacterised protein family UPF0070 DA442_03165 84f5edd39db94c9da79a1cc0c31fb4b8 204 Gene3D G3DSA:1.25.40.10 31 203 1.4E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_03165 84f5edd39db94c9da79a1cc0c31fb4b8 204 Pfam PF09976 Tetratricopeptide repeat-like domain 15 204 2.4E-55 T 14-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 DA442_01315 d6eb2cfe0cb34630faffdc4aff6a41b1 649 SUPERFAMILY SSF51735 144 268 3.86E-17 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_01315 d6eb2cfe0cb34630faffdc4aff6a41b1 649 Pfam PF02719 Polysaccharide biosynthesis protein 283 580 6.3E-128 T 14-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain DA442_01315 d6eb2cfe0cb34630faffdc4aff6a41b1 649 Pfam PF13727 CoA-binding domain 69 238 1.2E-10 T 14-10-2018 DA442_01315 d6eb2cfe0cb34630faffdc4aff6a41b1 649 Gene3D G3DSA:3.40.50.720 141 264 1.7E-30 T 14-10-2018 DA442_01315 d6eb2cfe0cb34630faffdc4aff6a41b1 649 SUPERFAMILY SSF51735 281 542 3.64E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_01315 d6eb2cfe0cb34630faffdc4aff6a41b1 649 Gene3D G3DSA:3.40.50.720 278 613 2.9E-113 T 14-10-2018 DA442_15805 9c892daa00daeb38a7023ae49141ed71 598 Pfam PF02254 TrkA-N domain 402 512 1.5E-21 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 DA442_15805 9c892daa00daeb38a7023ae49141ed71 598 SUPERFAMILY SSF51735 401 528 2.43E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_15805 9c892daa00daeb38a7023ae49141ed71 598 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 16 283 1.8E-81 T 14-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 DA442_15805 9c892daa00daeb38a7023ae49141ed71 598 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 3 598 47.425 T 14-10-2018 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 DA442_15805 9c892daa00daeb38a7023ae49141ed71 598 Gene3D G3DSA:1.20.1530.20 4 384 3.0E-81 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily DA442_15805 9c892daa00daeb38a7023ae49141ed71 598 Pfam PF00999 Sodium/hydrogen exchanger family 13 372 9.3E-67 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 DA442_15805 9c892daa00daeb38a7023ae49141ed71 598 Gene3D G3DSA:3.40.50.720 398 559 2.8E-34 T 14-10-2018 DA442_12035 ba26c185d65f5677b66684cb5ef1eb62 146 Pfam PF03692 Putative zinc- or iron-chelating domain 23 91 1.2E-8 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein DA442_12035 ba26c185d65f5677b66684cb5ef1eb62 146 PIRSF PIRSF006173 1 144 9.4E-66 T 14-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 DA442_12035 ba26c185d65f5677b66684cb5ef1eb62 146 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 1 144 41.286 T 14-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 DA442_17745 c511eb9581e3f8727457382888e1e955 300 SUPERFAMILY SSF103481 196 290 7.98E-8 T 14-10-2018 DA442_17745 c511eb9581e3f8727457382888e1e955 300 SUPERFAMILY SSF103481 50 142 1.16E-5 T 14-10-2018 DA442_17745 c511eb9581e3f8727457382888e1e955 300 Pfam PF00892 EamA-like transporter family 160 287 1.1E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DA442_12530 f6e2957459d3de9a059fe0b8f74d29c1 95 Gene3D G3DSA:1.10.10.10 2 95 1.4E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_12530 f6e2957459d3de9a059fe0b8f74d29c1 95 Pfam PF09904 Winged helix-turn helix 4 91 1.1E-37 T 14-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 DA442_12530 f6e2957459d3de9a059fe0b8f74d29c1 95 PIRSF PIRSF037266 1 94 5.6E-41 T 14-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 DA442_06290 52deb0e5413786dadd37a135c0dcb938 836 Pfam PF02687 FtsX-like permease family 734 828 7.4E-8 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DA442_06290 52deb0e5413786dadd37a135c0dcb938 836 Pfam PF12704 MacB-like periplasmic core domain 484 676 5.4E-7 T 14-10-2018 IPR025857 MacB-like periplasmic core domain DA442_07890 8b5120ea480c2eb783c7fec6d34f028d 495 Pfam PF01943 Polysaccharide biosynthesis protein 26 287 2.0E-11 T 14-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 DA442_22820 80fc0de0ffe0f7c3944b44bfaf5e28a1 140 Gene3D G3DSA:3.30.300.20 44 140 5.8E-32 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta DA442_22820 80fc0de0ffe0f7c3944b44bfaf5e28a1 140 Pfam PF02566 OsmC-like protein 38 133 3.5E-17 T 14-10-2018 IPR003718 OsmC/Ohr family DA442_22820 80fc0de0ffe0f7c3944b44bfaf5e28a1 140 SUPERFAMILY SSF82784 1 135 3.01E-41 T 14-10-2018 IPR036102 OsmC/Ohr superfamily DA442_22820 80fc0de0ffe0f7c3944b44bfaf5e28a1 140 Gene3D G3DSA:2.20.25.10 1 43 8.9E-21 T 14-10-2018 DA442_22820 80fc0de0ffe0f7c3944b44bfaf5e28a1 140 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 4 135 1.4E-51 T 14-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 DA442_19325 acc76390403dada85514d3a0036c62e5 129 Pfam PF11782 Protein of unknown function (DUF3319) 1 89 3.5E-44 T 14-10-2018 IPR021753 Protein of unknown function DUF3319 DA442_16115 13aed6af56a594390626c85bc0b08f6a 368 Pfam PF01551 Peptidase family M23 269 362 1.1E-24 T 14-10-2018 IPR016047 Peptidase M23 DA442_16115 13aed6af56a594390626c85bc0b08f6a 368 SUPERFAMILY SSF51261 135 366 4.5E-49 T 14-10-2018 IPR011055 Duplicated hybrid motif DA442_16115 13aed6af56a594390626c85bc0b08f6a 368 Gene3D G3DSA:2.70.70.10 229 368 9.8E-35 T 14-10-2018 IPR011055 Duplicated hybrid motif DA442_05770 979017b984c7d4c90f33da3fadc163ce 279 Pfam PF07103 Protein of unknown function (DUF1365) 16 252 5.5E-69 T 14-10-2018 IPR010775 Protein of unknown function DUF1365 DA442_23725 019a62061904daf9236fdf46c43faa82 161 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 147 7.9E-16 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DA442_23725 019a62061904daf9236fdf46c43faa82 161 SUPERFAMILY SSF54593 1 150 8.73E-29 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DA442_23725 019a62061904daf9236fdf46c43faa82 161 Gene3D G3DSA:3.10.180.10 1 150 6.6E-26 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DA442_23725 019a62061904daf9236fdf46c43faa82 161 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 DA442_12485 aabd9421d9f547ebf9d231c105ea1ba1 144 Gene3D G3DSA:3.30.160.170 43 141 5.1E-13 T 14-10-2018 IPR035924 FlaG-like superfamily DA442_12485 aabd9421d9f547ebf9d231c105ea1ba1 144 Pfam PF03646 FlaG protein 44 142 6.2E-25 T 14-10-2018 IPR005186 FlaG protein DA442_12485 aabd9421d9f547ebf9d231c105ea1ba1 144 SUPERFAMILY SSF160214 62 143 2.88E-22 T 14-10-2018 IPR035924 FlaG-like superfamily DA442_08565 1fd63605a8ff3e7cf2b8a0a335288c71 117 Pfam PF11042 Protein of unknown function (DUF2750) 13 113 2.0E-33 T 14-10-2018 IPR021284 Protein of unknown function DUF2750 DA442_06325 fe2ea6abada0f5c180216822764d93ee 88 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 85 1.4E-46 T 14-10-2018 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 DA442_06325 fe2ea6abada0f5c180216822764d93ee 88 Gene3D G3DSA:3.40.30.10 1 84 1.5E-25 T 14-10-2018 DA442_06325 fe2ea6abada0f5c180216822764d93ee 88 PRINTS PR00160 Glutaredoxin signature 3 21 5.3E-12 T 14-10-2018 IPR014025 Glutaredoxin subgroup DA442_06325 fe2ea6abada0f5c180216822764d93ee 88 PRINTS PR00160 Glutaredoxin signature 52 65 5.3E-12 T 14-10-2018 IPR014025 Glutaredoxin subgroup DA442_06325 fe2ea6abada0f5c180216822764d93ee 88 PRINTS PR00160 Glutaredoxin signature 66 79 5.3E-12 T 14-10-2018 IPR014025 Glutaredoxin subgroup DA442_06325 fe2ea6abada0f5c180216822764d93ee 88 SUPERFAMILY SSF52833 3 81 3.71E-21 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_06325 fe2ea6abada0f5c180216822764d93ee 88 Pfam PF00462 Glutaredoxin 3 69 3.3E-16 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 DA442_12620 78938dc7cb4dcdc48ed3b1a0c425f833 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 2 208 2.9E-92 T 14-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 DA442_12620 78938dc7cb4dcdc48ed3b1a0c425f833 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.65 T 14-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 DA442_12620 78938dc7cb4dcdc48ed3b1a0c425f833 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 5.3E-65 T 14-10-2018 DA442_12620 78938dc7cb4dcdc48ed3b1a0c425f833 208 SUPERFAMILY SSF53271 3 206 3.28E-67 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like DA442_12620 78938dc7cb4dcdc48ed3b1a0c425f833 208 Gene3D G3DSA:3.40.50.2020 1 208 4.0E-74 T 14-10-2018 DA442_07240 8b10ea12398d07381ba9e91b8a90ce43 50 Pfam PF13737 Transposase DDE domain 9 50 1.5E-6 T 14-10-2018 IPR025668 Transposase DDE domain DA442_15260 2876cdfb1001051c471230199773e91e 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 154 1.5E-36 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 DA442_15260 2876cdfb1001051c471230199773e91e 162 Pfam PF04093 rod shape-determining protein MreD 9 154 8.5E-40 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 DA442_15260 2876cdfb1001051c471230199773e91e 162 PIRSF PIRSF018472 1 162 9.3E-42 T 14-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type DA442_23990 aa67437d10c88ee325eb7dabf91b89ed 134 Gene3D G3DSA:3.30.420.270 61 129 3.9E-11 T 14-10-2018 DA442_23990 aa67437d10c88ee325eb7dabf91b89ed 134 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 132 2.6E-28 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 DA442_18695 1e9996cd3be65527839b286773b16c43 225 SMART SM00448 2 115 4.1E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_18695 1e9996cd3be65527839b286773b16c43 225 SUPERFAMILY SSF52172 1 166 1.71E-30 T 14-10-2018 IPR011006 CheY-like superfamily DA442_18695 1e9996cd3be65527839b286773b16c43 225 PIRSF PIRSF006171 1 222 1.6E-73 T 14-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 DA442_18695 1e9996cd3be65527839b286773b16c43 225 Pfam PF00072 Response regulator receiver domain 4 114 9.5E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DA442_18695 1e9996cd3be65527839b286773b16c43 225 Gene3D G3DSA:3.40.50.12740 2 204 6.2E-25 T 14-10-2018 DA442_08750 0b897fec26ebee20487f960785fc3aac 88 PIRSF PIRSF004669 1 88 5.4E-26 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DA442_08750 0b897fec26ebee20487f960785fc3aac 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 8.7E-25 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DA442_08750 0b897fec26ebee20487f960785fc3aac 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 8.7E-25 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DA442_08750 0b897fec26ebee20487f960785fc3aac 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 8.7E-25 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DA442_08750 0b897fec26ebee20487f960785fc3aac 88 Pfam PF01313 Bacterial export proteins, family 3 6 77 3.1E-24 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DA442_08750 0b897fec26ebee20487f960785fc3aac 88 TIGRFAM TIGR01403 fliQ_rel_III: type III secretion protein, HrpO family 5 84 1.8E-31 T 14-10-2018 IPR006306 Type III secretion protein HrpO GO:0009306|GO:0016021 DA442_17485 a909fcd6bbd97c2a817942ce1a3b8a03 84 Gene3D G3DSA:1.20.20.10 1 77 1.2E-27 T 14-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_17485 a909fcd6bbd97c2a817942ce1a3b8a03 84 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 19 76 1.2E-30 T 14-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 DA442_17485 a909fcd6bbd97c2a817942ce1a3b8a03 84 SUPERFAMILY SSF81333 3 78 1.7E-19 T 14-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily DA442_17485 a909fcd6bbd97c2a817942ce1a3b8a03 84 Pfam PF00137 ATP synthase subunit C 10 72 1.3E-10 T 14-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 DA442_17485 a909fcd6bbd97c2a817942ce1a3b8a03 84 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 74 13.874 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_17485 a909fcd6bbd97c2a817942ce1a3b8a03 84 PRINTS PR00124 ATP synthase C subunit signature 11 30 1.7E-6 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_17485 a909fcd6bbd97c2a817942ce1a3b8a03 84 PRINTS PR00124 ATP synthase C subunit signature 32 47 1.7E-6 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_17485 a909fcd6bbd97c2a817942ce1a3b8a03 84 PRINTS PR00124 ATP synthase C subunit signature 49 74 1.7E-6 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_17485 a909fcd6bbd97c2a817942ce1a3b8a03 84 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 14-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DA442_10075 f9c31b235fea0d003484db009ce7c425 192 Pfam PF02810 SEC-C motif 175 192 1.9E-4 T 14-10-2018 IPR004027 SEC-C motif DA442_10075 f9c31b235fea0d003484db009ce7c425 192 Gene3D G3DSA:3.10.450.50 135 192 3.4E-7 T 14-10-2018 DA442_10075 f9c31b235fea0d003484db009ce7c425 192 SUPERFAMILY SSF103642 173 191 7.85E-5 T 14-10-2018 DA442_08530 8460398c8f94f5eea9e2769ab7d6d60a 214 Gene3D G3DSA:3.30.1330.60 69 201 2.0E-29 T 14-10-2018 IPR036737 OmpA-like domain superfamily DA442_08530 8460398c8f94f5eea9e2769ab7d6d60a 214 SUPERFAMILY SSF103088 64 193 2.22E-30 T 14-10-2018 IPR036737 OmpA-like domain superfamily DA442_08530 8460398c8f94f5eea9e2769ab7d6d60a 214 PRINTS PR01021 OMPA domain signature 124 139 8.1E-7 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DA442_08530 8460398c8f94f5eea9e2769ab7d6d60a 214 PRINTS PR01021 OMPA domain signature 139 155 8.1E-7 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DA442_08530 8460398c8f94f5eea9e2769ab7d6d60a 214 PRINTS PR01021 OMPA domain signature 94 116 8.1E-7 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 DA442_08530 8460398c8f94f5eea9e2769ab7d6d60a 214 Pfam PF00691 OmpA family 93 188 1.6E-19 T 14-10-2018 IPR006665 OmpA-like domain DA442_02740 21616f5d4ab57f83aeafd54717aaa7c4 169 TIGRFAM TIGR00077 lspA: signal peptidase II 10 165 5.0E-49 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DA442_02740 21616f5d4ab57f83aeafd54717aaa7c4 169 Pfam PF01252 Signal peptidase (SPase) II 19 161 1.0E-38 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DA442_02740 21616f5d4ab57f83aeafd54717aaa7c4 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 106 121 8.3E-18 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DA442_02740 21616f5d4ab57f83aeafd54717aaa7c4 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 142 158 8.3E-18 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DA442_02740 21616f5d4ab57f83aeafd54717aaa7c4 169 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 58 66 8.3E-18 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DA442_02740 21616f5d4ab57f83aeafd54717aaa7c4 169 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 10 167 16.653 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DA442_02740 21616f5d4ab57f83aeafd54717aaa7c4 169 ProSitePatterns PS00855 Signal peptidases II signature. 109 121 - T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DA442_22770 4ce8aea20b629278d55d72a274926d69 329 Pfam PF02653 Branched-chain amino acid transport system / permease component 61 318 1.2E-37 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DA442_22955 7412fe5132fa168c4e63084ed80214be 487 Gene3D G3DSA:1.10.1040.10 282 487 2.4E-74 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DA442_22955 7412fe5132fa168c4e63084ed80214be 487 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 217 463 3.6E-90 T 14-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 DA442_22955 7412fe5132fa168c4e63084ed80214be 487 SUPERFAMILY SSF48179 283 486 1.16E-64 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DA442_22955 7412fe5132fa168c4e63084ed80214be 487 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 218 230 - T 14-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DA442_22955 7412fe5132fa168c4e63084ed80214be 487 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 26 188 1.9E-51 T 14-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 DA442_22955 7412fe5132fa168c4e63084ed80214be 487 Gene3D G3DSA:3.40.50.720 7 281 5.6E-110 T 14-10-2018 DA442_22955 7412fe5132fa168c4e63084ed80214be 487 PRINTS PR00084 Mannitol dehydrogenase signature 248 263 5.5E-21 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DA442_22955 7412fe5132fa168c4e63084ed80214be 487 PRINTS PR00084 Mannitol dehydrogenase signature 27 37 5.5E-21 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DA442_22955 7412fe5132fa168c4e63084ed80214be 487 PRINTS PR00084 Mannitol dehydrogenase signature 179 192 5.5E-21 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DA442_22955 7412fe5132fa168c4e63084ed80214be 487 PRINTS PR00084 Mannitol dehydrogenase signature 218 231 5.5E-21 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DA442_22955 7412fe5132fa168c4e63084ed80214be 487 SUPERFAMILY SSF51735 4 281 1.54E-98 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_10510 ff8b6e5aead3e4eae9e1ee34f74b389a 137 SUPERFAMILY SSF54593 9 133 2.95E-23 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DA442_10510 ff8b6e5aead3e4eae9e1ee34f74b389a 137 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 128 2.6E-12 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DA442_10510 ff8b6e5aead3e4eae9e1ee34f74b389a 137 Gene3D G3DSA:3.10.180.10 6 135 2.6E-33 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DA442_08200 7311a258885d483262b41c7f3fcf891e 286 SUPERFAMILY SSF161098 10 275 2.49E-54 T 14-10-2018 IPR035906 MetI-like superfamily DA442_08200 7311a258885d483262b41c7f3fcf891e 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 283 5.4E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DA442_08200 7311a258885d483262b41c7f3fcf891e 286 Gene3D G3DSA:1.10.3720.10 7 278 4.1E-54 T 14-10-2018 IPR035906 MetI-like superfamily DA442_05480 02b0efc5b560f6c6100f7cdf16cba8cd 528 PIRSF PIRSF006446 1 329 5.1E-115 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 DA442_05480 02b0efc5b560f6c6100f7cdf16cba8cd 528 PIRSF PIRSF006446 335 526 3.5E-33 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 DA442_05480 02b0efc5b560f6c6100f7cdf16cba8cd 528 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 2.3E-178 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 DA442_18345 de9b49fa5ea31eb49782b3e4602cf475 111 Gene3D G3DSA:2.40.50.200 10 111 1.9E-33 T 14-10-2018 IPR036700 Bacterial OB-fold superfamily DA442_18345 de9b49fa5ea31eb49782b3e4602cf475 111 SUPERFAMILY SSF101756 7 111 6.8E-33 T 14-10-2018 IPR036700 Bacterial OB-fold superfamily DA442_18345 de9b49fa5ea31eb49782b3e4602cf475 111 Pfam PF04076 Bacterial OB fold (BOF) protein 19 110 9.5E-27 T 14-10-2018 IPR005220 Bacterial OB-fold DA442_23665 8ec92f17dbdeaa974c09173e2346ec68 213 Gene3D G3DSA:2.40.160.20 22 213 1.4E-82 T 14-10-2018 DA442_23665 8ec92f17dbdeaa974c09173e2346ec68 213 SUPERFAMILY SSF56925 23 213 4.71E-34 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DA442_23665 8ec92f17dbdeaa974c09173e2346ec68 213 Pfam PF03922 OmpW family 24 213 8.7E-72 T 14-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 DA442_01635 a79b598bac286def3621ff46a426269e 419 Pfam PF12704 MacB-like periplasmic core domain 20 207 1.3E-9 T 14-10-2018 IPR025857 MacB-like periplasmic core domain DA442_01635 a79b598bac286def3621ff46a426269e 419 Pfam PF02687 FtsX-like permease family 317 410 4.6E-12 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DA442_03415 74228284d4706d75737a32397e077b0c 529 Gene3D G3DSA:3.40.190.10 41 283 1.2E-73 T 14-10-2018 DA442_03415 74228284d4706d75737a32397e077b0c 529 Gene3D G3DSA:1.10.530.10 307 485 5.9E-34 T 14-10-2018 DA442_03415 74228284d4706d75737a32397e077b0c 529 SMART SM00062 47 288 5.0E-25 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DA442_03415 74228284d4706d75737a32397e077b0c 529 Pfam PF01464 Transglycosylase SLT domain 318 421 1.0E-20 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 DA442_03415 74228284d4706d75737a32397e077b0c 529 Gene3D G3DSA:3.40.190.10 132 244 1.2E-73 T 14-10-2018 DA442_03415 74228284d4706d75737a32397e077b0c 529 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 329 357 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 DA442_03415 74228284d4706d75737a32397e077b0c 529 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 12 488 48.65 T 14-10-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 DA442_03415 74228284d4706d75737a32397e077b0c 529 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 48 287 3.3E-29 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DA442_03415 74228284d4706d75737a32397e077b0c 529 SUPERFAMILY SSF53850 48 287 5.34E-33 T 14-10-2018 DA442_03415 74228284d4706d75737a32397e077b0c 529 SUPERFAMILY SSF53955 265 470 1.29E-35 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily DA442_02680 dbcb7f045a1ced207271d872c1ca262f 273 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 257 1.4E-83 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 DA442_02680 dbcb7f045a1ced207271d872c1ca262f 273 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 262 20.086 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 DA442_02680 dbcb7f045a1ced207271d872c1ca262f 273 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 5 262 2.7E-90 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 DA442_02680 dbcb7f045a1ced207271d872c1ca262f 273 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 DA442_15210 535f74b92167af110677d39e5c4661f4 250 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 60 74 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_15210 535f74b92167af110677d39e5c4661f4 250 Gene3D G3DSA:3.30.2350.10 4 221 1.6E-69 T 14-10-2018 DA442_15210 535f74b92167af110677d39e5c4661f4 250 SUPERFAMILY SSF55120 7 221 2.88E-62 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_15210 535f74b92167af110677d39e5c4661f4 250 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 8 211 8.3E-58 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_15210 535f74b92167af110677d39e5c4661f4 250 Pfam PF00849 RNA pseudouridylate synthase 22 174 3.4E-30 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DA442_19615 4cf3cf629c531df831b0cafbb9bc6e28 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.8E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_19615 4cf3cf629c531df831b0cafbb9bc6e28 294 SUPERFAMILY SSF53850 88 292 6.7E-28 T 14-10-2018 DA442_19615 4cf3cf629c531df831b0cafbb9bc6e28 294 Pfam PF03466 LysR substrate binding domain 87 282 1.6E-24 T 14-10-2018 IPR005119 LysR, substrate-binding DA442_19615 4cf3cf629c531df831b0cafbb9bc6e28 294 Gene3D G3DSA:3.40.190.290 91 292 7.7E-30 T 14-10-2018 DA442_19615 4cf3cf629c531df831b0cafbb9bc6e28 294 SUPERFAMILY SSF46785 1 87 4.36E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_19615 4cf3cf629c531df831b0cafbb9bc6e28 294 Gene3D G3DSA:1.10.10.10 1 84 3.1E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_19615 4cf3cf629c531df831b0cafbb9bc6e28 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.8E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_19615 4cf3cf629c531df831b0cafbb9bc6e28 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.8E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_19615 4cf3cf629c531df831b0cafbb9bc6e28 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.8E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DA442_12020 8d639f6dba812a138d57bcd96b070f7e 128 SUPERFAMILY SSF54593 2 124 8.86E-29 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DA442_12020 8d639f6dba812a138d57bcd96b070f7e 128 Gene3D G3DSA:3.10.180.10 1 126 9.7E-35 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DA442_12020 8d639f6dba812a138d57bcd96b070f7e 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 120 1.8E-17 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DA442_14565 4377f8e09e4b37b8bd1903c6d1ff6d6e 156 PIRSF PIRSF004923 1 156 3.0E-39 T 14-10-2018 IPR026268 Protein RseC DA442_14565 4377f8e09e4b37b8bd1903c6d1ff6d6e 156 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 18 149 6.9E-32 T 14-10-2018 DA442_13530 c679358242fb3cfc9f207b21552b7bba 545 SUPERFAMILY SSF53300 371 518 2.08E-16 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily DA442_13530 c679358242fb3cfc9f207b21552b7bba 545 SMART SM00327 370 543 1.7E-6 T 14-10-2018 IPR002035 von Willebrand factor, type A DA442_13530 c679358242fb3cfc9f207b21552b7bba 545 Pfam PF00092 von Willebrand factor type A domain 375 514 1.1E-6 T 14-10-2018 IPR002035 von Willebrand factor, type A DA442_13530 c679358242fb3cfc9f207b21552b7bba 545 Gene3D G3DSA:3.40.50.410 368 541 6.6E-13 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily DA442_05155 0df2d1b74dd1f45ebbf8a9cd46b52d0c 251 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 2.2E-117 T 14-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 DA442_05155 0df2d1b74dd1f45ebbf8a9cd46b52d0c 251 Pfam PF02348 Cytidylyltransferase 5 221 1.4E-65 T 14-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 DA442_05155 0df2d1b74dd1f45ebbf8a9cd46b52d0c 251 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 46.883 T 14-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 DA442_05155 0df2d1b74dd1f45ebbf8a9cd46b52d0c 251 SUPERFAMILY SSF53448 3 246 2.48E-64 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DA442_05155 0df2d1b74dd1f45ebbf8a9cd46b52d0c 251 Gene3D G3DSA:3.90.550.10 1 251 4.4E-98 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DA442_18660 92d60268a1c212aa631da7eb62ae6315 294 SUPERFAMILY SSF103481 185 283 4.84E-15 T 14-10-2018 DA442_18660 92d60268a1c212aa631da7eb62ae6315 294 SUPERFAMILY SSF103481 41 138 1.83E-17 T 14-10-2018 DA442_18660 92d60268a1c212aa631da7eb62ae6315 294 Pfam PF00892 EamA-like transporter family 4 135 2.1E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DA442_18660 92d60268a1c212aa631da7eb62ae6315 294 Pfam PF00892 EamA-like transporter family 150 280 3.7E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DA442_20800 6029c1bebd2c83ac13830f95a3915680 350 Gene3D G3DSA:3.20.20.70 1 349 1.2E-165 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_20800 6029c1bebd2c83ac13830f95a3915680 350 SUPERFAMILY SSF51569 6 347 2.2E-137 T 14-10-2018 DA442_20800 6029c1bebd2c83ac13830f95a3915680 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 348 1.6E-169 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 DA442_20800 6029c1bebd2c83ac13830f95a3915680 350 Pfam PF00793 DAHP synthetase I family 38 337 1.3E-105 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 DA442_20800 6029c1bebd2c83ac13830f95a3915680 350 PIRSF PIRSF001361 1 350 9.6E-162 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 DA442_07235 4196b2e96d432f06c7d7d1d70dcf67cf 269 Pfam PF00486 Transcriptional regulatory protein, C terminal 26 96 2.1E-9 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DA442_07235 4196b2e96d432f06c7d7d1d70dcf67cf 269 SUPERFAMILY SSF46894 16 97 1.84E-11 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DA442_07235 4196b2e96d432f06c7d7d1d70dcf67cf 269 SMART SM00862 23 97 0.0087 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DA442_07235 4196b2e96d432f06c7d7d1d70dcf67cf 269 Gene3D G3DSA:1.10.10.10 13 103 1.0E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_13420 421b6af25ca2cd328982fa90e2852d01 427 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 9.2E-27 T 14-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 DA442_13420 421b6af25ca2cd328982fa90e2852d01 427 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 201 420 3.0E-74 T 14-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 DA442_13420 421b6af25ca2cd328982fa90e2852d01 427 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 420 5.7E-155 T 14-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 DA442_13420 421b6af25ca2cd328982fa90e2852d01 427 Pfam PF07670 Nucleoside recognition 99 195 1.1E-7 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 DA442_01095 f84128bcee22decf19dbd076dab18eb0 397 Gene3D G3DSA:3.40.50.2000 7 370 5.8E-89 T 14-10-2018 DA442_01095 f84128bcee22decf19dbd076dab18eb0 397 Gene3D G3DSA:3.40.50.2000 193 359 5.8E-89 T 14-10-2018 DA442_01095 f84128bcee22decf19dbd076dab18eb0 397 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 27 373 3.8E-92 T 14-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DA442_01095 f84128bcee22decf19dbd076dab18eb0 397 TIGRFAM TIGR03568 NeuC_NnaA: UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing 6 372 1.0E-144 T 14-10-2018 IPR020004 UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing GO:0004553|GO:0006047 Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DA442_01095 f84128bcee22decf19dbd076dab18eb0 397 SUPERFAMILY SSF53756 6 375 1.05E-94 T 14-10-2018 DA442_05485 48a583f1af061715b758f91bc274b979 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 4.9E-172 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 DA442_05485 48a583f1af061715b758f91bc274b979 378 PIRSF PIRSF000267 2 377 2.2E-123 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 DA442_05485 48a583f1af061715b758f91bc274b979 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 361 1.7E-108 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 DA442_07885 7b152d97313782dc17857e4dbf1aebbf 432 Pfam PF04932 O-Antigen ligase 217 355 1.6E-19 T 14-10-2018 IPR007016 O-antigen ligase-related DA442_19015 1914d205bccc9c0a28073200c69d75fd 218 Pfam PF07947 YhhN family 24 204 7.0E-42 T 14-10-2018 IPR012506 YhhN-like GO:0016021 DA442_06900 6b0af16f0bba737bfc6dad04143c08b8 310 Gene3D G3DSA:1.10.3720.10 99 306 4.2E-17 T 14-10-2018 IPR035906 MetI-like superfamily DA442_06900 6b0af16f0bba737bfc6dad04143c08b8 310 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 27 67 6.8E-13 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DA442_06900 6b0af16f0bba737bfc6dad04143c08b8 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 127 308 8.9E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DA442_06900 6b0af16f0bba737bfc6dad04143c08b8 310 SUPERFAMILY SSF161098 106 291 2.09E-25 T 14-10-2018 IPR035906 MetI-like superfamily DA442_10550 c7882a9877ab2782d05f1e08a10ad9f6 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 4.3E-15 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_03720 3322f517f8b26f1e1dc8f5c550fa2418 180 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 7 164 23.938 T 14-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 DA442_03720 3322f517f8b26f1e1dc8f5c550fa2418 180 Gene3D G3DSA:3.30.160.150 19 168 2.9E-50 T 14-10-2018 DA442_03720 3322f517f8b26f1e1dc8f5c550fa2418 180 Pfam PF04390 Lipopolysaccharide-assembly 41 159 3.9E-13 T 14-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 DA442_12610 c506ba94328ececf88da3058e75e9b01 400 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 18 249 1.6E-68 T 14-10-2018 IPR018642 Protein of unknown function DUF2066 DA442_24560 b343005308b75ad271927f6d422e82e1 398 Pfam PF07559 Flagellar basal body protein FlaE 172 279 5.5E-25 T 14-10-2018 IPR011491 Flagellar hook protein FlgE DA442_24560 b343005308b75ad271927f6d422e82e1 398 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 320 396 1.5E-17 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DA442_24560 b343005308b75ad271927f6d422e82e1 398 SUPERFAMILY SSF117143 72 359 1.27E-80 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like DA442_24560 b343005308b75ad271927f6d422e82e1 398 Gene3D G3DSA:2.60.98.20 144 280 1.5E-35 T 14-10-2018 IPR037058 Flagellar hook protein FlgE superfamily DA442_24560 b343005308b75ad271927f6d422e82e1 398 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 380 1.8E-94 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G DA442_24560 b343005308b75ad271927f6d422e82e1 398 Pfam PF00460 Flagella basal body rod protein 3 33 3.0E-9 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 DA442_12965 5050c4a5cc99484cb90466ca72db3c25 446 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 446 46.452 T 14-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 DA442_12965 5050c4a5cc99484cb90466ca72db3c25 446 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 256 2.3E-113 T 14-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 DA442_12965 5050c4a5cc99484cb90466ca72db3c25 446 Pfam PF11973 NQRA C-terminal domain 261 310 1.7E-21 T 14-10-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 DA442_12965 5050c4a5cc99484cb90466ca72db3c25 446 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 446 2.4E-205 T 14-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 DA442_02455 e549bd491eb5e4295fefda67c10adffc 317 Pfam PF03186 CobD/Cbib protein 19 283 2.6E-31 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 DA442_17115 95b94d4375863d7ccb7b96ada2f75fc0 304 SUPERFAMILY SSF103481 190 291 4.05E-9 T 14-10-2018 DA442_17115 95b94d4375863d7ccb7b96ada2f75fc0 304 Pfam PF00892 EamA-like transporter family 12 145 2.2E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DA442_17115 95b94d4375863d7ccb7b96ada2f75fc0 304 SUPERFAMILY SSF103481 50 146 9.29E-14 T 14-10-2018 DA442_17115 95b94d4375863d7ccb7b96ada2f75fc0 304 TIGRFAM TIGR00688 rarD: protein RarD 11 264 4.8E-87 T 14-10-2018 IPR004626 RarD protein GO:0005887 DA442_04370 630b72149f82cf94556ac29d53523cd9 149 Gene3D G3DSA:1.10.10.10 1 84 9.8E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_04370 630b72149f82cf94556ac29d53523cd9 149 Gene3D G3DSA:3.30.1490.190 85 141 5.6E-23 T 14-10-2018 DA442_04370 630b72149f82cf94556ac29d53523cd9 149 SUPERFAMILY SSF46785 5 135 8.86E-44 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_04370 630b72149f82cf94556ac29d53523cd9 149 Pfam PF01475 Ferric uptake regulator family 11 130 1.4E-46 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 DA442_00030 ffa86c946ecd11e7f71dc171286d8564 138 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 49 119 3.8E-8 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 DA442_00030 ffa86c946ecd11e7f71dc171286d8564 138 Gene3D G3DSA:3.10.50.30 46 127 1.3E-9 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 DA442_00030 ffa86c946ecd11e7f71dc171286d8564 138 SUPERFAMILY SSF54534 49 121 3.14E-10 T 14-10-2018 DA442_21415 af26683694515d7fe4c92bfea271929f 380 SUPERFAMILY SSF56935 33 372 1.08E-21 T 14-10-2018 DA442_21415 af26683694515d7fe4c92bfea271929f 380 Gene3D G3DSA:2.40.160.10 29 369 7.1E-8 T 14-10-2018 IPR023614 Porin domain superfamily DA442_01020 b0d310375d97d952c03f985618f366c8 224 SUPERFAMILY SSF47781 17 91 2.51E-11 T 14-10-2018 IPR010994 RuvA domain 2-like DA442_01020 b0d310375d97d952c03f985618f366c8 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 1.2E-77 T 14-10-2018 IPR001405 Uncharacterised protein family UPF0758 DA442_01020 b0d310375d97d952c03f985618f366c8 224 SUPERFAMILY SSF102712 134 190 8.24E-5 T 14-10-2018 DA442_01020 b0d310375d97d952c03f985618f366c8 224 Gene3D G3DSA:3.40.140.10 101 224 2.5E-43 T 14-10-2018 DA442_01020 b0d310375d97d952c03f985618f366c8 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 14-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site DA442_01020 b0d310375d97d952c03f985618f366c8 224 Gene3D G3DSA:1.10.150.20 45 87 2.4E-5 T 14-10-2018 DA442_01020 b0d310375d97d952c03f985618f366c8 224 Pfam PF04002 RadC-like JAB domain 104 222 5.6E-45 T 14-10-2018 IPR025657 RadC-like JAB domain DA442_04895 efcabeed6a1c0e099ca849bcaab3da4e 290 Pfam PF07466 Protein of unknown function (DUF1517) 28 125 1.3E-5 T 14-10-2018 IPR010903 Protein of unknown function DUF1517 DA442_04895 efcabeed6a1c0e099ca849bcaab3da4e 290 SUPERFAMILY SSF54427 169 289 1.45E-16 T 14-10-2018 IPR032710 NTF2-like domain superfamily DA442_04895 efcabeed6a1c0e099ca849bcaab3da4e 290 SMART SM00978 159 290 5.1E-36 T 14-10-2018 IPR007379 Tim44-like domain DA442_04895 efcabeed6a1c0e099ca849bcaab3da4e 290 Pfam PF04280 Tim44-like domain 168 289 9.9E-15 T 14-10-2018 IPR007379 Tim44-like domain DA442_04895 efcabeed6a1c0e099ca849bcaab3da4e 290 Gene3D G3DSA:3.10.450.240 166 290 5.8E-6 T 14-10-2018 DA442_22735 27338c8eb54ab4019d9b45eaad21fc1b 414 Gene3D G3DSA:3.40.190.10 25 371 2.0E-123 T 14-10-2018 DA442_22735 27338c8eb54ab4019d9b45eaad21fc1b 414 Pfam PF13416 Bacterial extracellular solute-binding protein 64 343 9.4E-16 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein DA442_22735 27338c8eb54ab4019d9b45eaad21fc1b 414 SUPERFAMILY SSF53850 25 409 7.67E-43 T 14-10-2018 DA442_22735 27338c8eb54ab4019d9b45eaad21fc1b 414 Gene3D G3DSA:3.40.190.10 140 397 2.0E-123 T 14-10-2018 DA442_22705 6afba86d5049346fabe13167b4062556 678 Pfam PF07715 TonB-dependent Receptor Plug Domain 66 162 1.1E-21 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain DA442_22705 6afba86d5049346fabe13167b4062556 678 SUPERFAMILY SSF56935 34 678 5.86E-123 T 14-10-2018 DA442_22705 6afba86d5049346fabe13167b4062556 678 Gene3D G3DSA:2.170.130.10 48 173 4.3E-36 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily DA442_22705 6afba86d5049346fabe13167b4062556 678 Gene3D G3DSA:2.40.170.20 174 678 5.9E-95 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DA442_22705 6afba86d5049346fabe13167b4062556 678 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 66 678 2.8E-89 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 DA442_22705 6afba86d5049346fabe13167b4062556 678 Pfam PF00593 TonB dependent receptor 272 676 2.6E-46 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel DA442_01830 ad2f5997f6fa2e08965e6c1974bf0b7d 781 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 3 753 20.143 T 14-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 DA442_01830 ad2f5997f6fa2e08965e6c1974bf0b7d 781 Gene3D G3DSA:2.60.450.10 49 99 3.9E-6 T 14-10-2018 DA442_01830 ad2f5997f6fa2e08965e6c1974bf0b7d 781 Pfam PF04453 Organic solvent tolerance protein 297 682 1.9E-112 T 14-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 DA442_01830 ad2f5997f6fa2e08965e6c1974bf0b7d 781 Pfam PF03968 OstA-like protein 58 189 2.9E-17 T 14-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal DA442_22335 759170732e70bccfc5097d431a2eb2f4 223 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 24 217 9.1E-53 T 14-10-2018 IPR018635 Uncharacterised protein family UPF0319 DA442_22335 759170732e70bccfc5097d431a2eb2f4 223 Hamap MF_00789 UPF0319 protein YccT [yccT]. 5 222 29.499 T 14-10-2018 IPR018635 Uncharacterised protein family UPF0319 DA442_00455 1fd5dbafd1c7d8ffec87be44174ce0be 143 Gene3D G3DSA:1.20.1260.10 2 140 3.5E-10 T 14-10-2018 IPR012347 Ferritin-like DA442_00455 1fd5dbafd1c7d8ffec87be44174ce0be 143 Pfam PF09537 Domain of unknown function (DUF2383) 5 111 1.5E-23 T 14-10-2018 IPR019052 Domain of unknown function DUF2383 DA442_07695 7f3df4e8228237e8220d1d1249fdb509 401 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 8 377 8.7E-110 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DA442_07695 7f3df4e8228237e8220d1d1249fdb509 401 PIRSF PIRSF006060 3 292 6.0E-12 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DA442_07695 7f3df4e8228237e8220d1d1249fdb509 401 PIRSF PIRSF006060 298 400 2.6 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DA442_07695 7f3df4e8228237e8220d1d1249fdb509 401 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 18 34 - T 14-10-2018 IPR013061 Tryptophan/tryrosine permease, conserved site DA442_07695 7f3df4e8228237e8220d1d1249fdb509 401 Gene3D G3DSA:1.20.1740.10 3 399 2.8E-13 T 14-10-2018 DA442_07695 7f3df4e8228237e8220d1d1249fdb509 401 Pfam PF03222 Tryptophan/tyrosine permease family 4 383 1.1E-108 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 DA442_07695 7f3df4e8228237e8220d1d1249fdb509 401 PRINTS PR00166 Aromatic amino acid permease signature 222 241 1.0E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DA442_07695 7f3df4e8228237e8220d1d1249fdb509 401 PRINTS PR00166 Aromatic amino acid permease signature 149 169 1.0E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DA442_07695 7f3df4e8228237e8220d1d1249fdb509 401 PRINTS PR00166 Aromatic amino acid permease signature 334 353 1.0E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DA442_07695 7f3df4e8228237e8220d1d1249fdb509 401 PRINTS PR00166 Aromatic amino acid permease signature 183 205 1.0E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DA442_07695 7f3df4e8228237e8220d1d1249fdb509 401 PRINTS PR00166 Aromatic amino acid permease signature 11 34 1.0E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DA442_07695 7f3df4e8228237e8220d1d1249fdb509 401 PRINTS PR00166 Aromatic amino acid permease signature 38 57 1.0E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DA442_07695 7f3df4e8228237e8220d1d1249fdb509 401 PRINTS PR00166 Aromatic amino acid permease signature 279 298 1.0E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DA442_07695 7f3df4e8228237e8220d1d1249fdb509 401 PRINTS PR00166 Aromatic amino acid permease signature 83 103 1.0E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DA442_07695 7f3df4e8228237e8220d1d1249fdb509 401 PRINTS PR00166 Aromatic amino acid permease signature 313 331 1.0E-79 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 DA442_25830 d686b903f3b77447689378b265ac1215 103 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 2 100 4.8E-24 T 14-10-2018 IPR008407 Branched-chain amino acid transport, AzlD DA442_24580 89ca06c981bb3ad4984a90b13fecbe21 378 Hamap MF_00416 Flagellar P-ring protein [flgI]. 15 378 36.817 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DA442_24580 89ca06c981bb3ad4984a90b13fecbe21 378 PRINTS PR01010 Flagellar P-ring protein signature 69 84 8.1E-77 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DA442_24580 89ca06c981bb3ad4984a90b13fecbe21 378 PRINTS PR01010 Flagellar P-ring protein signature 117 134 8.1E-77 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DA442_24580 89ca06c981bb3ad4984a90b13fecbe21 378 PRINTS PR01010 Flagellar P-ring protein signature 50 65 8.1E-77 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DA442_24580 89ca06c981bb3ad4984a90b13fecbe21 378 PRINTS PR01010 Flagellar P-ring protein signature 201 219 8.1E-77 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DA442_24580 89ca06c981bb3ad4984a90b13fecbe21 378 PRINTS PR01010 Flagellar P-ring protein signature 175 193 8.1E-77 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DA442_24580 89ca06c981bb3ad4984a90b13fecbe21 378 PRINTS PR01010 Flagellar P-ring protein signature 35 50 8.1E-77 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DA442_24580 89ca06c981bb3ad4984a90b13fecbe21 378 PRINTS PR01010 Flagellar P-ring protein signature 265 277 8.1E-77 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DA442_24580 89ca06c981bb3ad4984a90b13fecbe21 378 PRINTS PR01010 Flagellar P-ring protein signature 95 114 8.1E-77 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DA442_24580 89ca06c981bb3ad4984a90b13fecbe21 378 PRINTS PR01010 Flagellar P-ring protein signature 134 152 8.1E-77 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DA442_24580 89ca06c981bb3ad4984a90b13fecbe21 378 Pfam PF02119 Flagellar P-ring protein 36 377 7.1E-136 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 DA442_02940 35d5f09cd47f866619154da931661d11 304 Pfam PF04381 Putative exonuclease, RdgC 1 298 3.2E-125 T 14-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 DA442_02940 35d5f09cd47f866619154da931661d11 304 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 301 38.929 T 14-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 DA442_22395 c6057bda647407960348d439d1205044 162 Gene3D G3DSA:3.40.630.30 6 162 9.3E-27 T 14-10-2018 DA442_22395 c6057bda647407960348d439d1205044 162 Pfam PF00583 Acetyltransferase (GNAT) family 38 149 1.9E-14 T 14-10-2018 IPR000182 GNAT domain DA442_22395 c6057bda647407960348d439d1205044 162 SUPERFAMILY SSF55729 4 155 4.09E-23 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_02520 feb35853c68194809c19fd88004be4f3 135 Pfam PF11697 Protein of unknown function (DUF3293) 36 105 3.2E-19 T 14-10-2018 IPR021710 Protein of unknown function DUF3293 DA442_02770 77d04baf20b33300ee25d9445ebeee26 113 Pfam PF10973 Protein of unknown function (DUF2799) 28 108 6.0E-22 T 14-10-2018 IPR021242 Protein of unknown function DUF2799 DA442_11170 48f435a1faba4824b79a8a752d82be6d 182 SUPERFAMILY SSF52499 3 182 1.83E-46 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DA442_11170 48f435a1faba4824b79a8a752d82be6d 182 Pfam PF00857 Isochorismatase family 9 157 8.1E-30 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 DA442_11170 48f435a1faba4824b79a8a752d82be6d 182 Gene3D G3DSA:3.40.50.850 1 182 1.4E-47 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DA442_01225 5917dc6303016fd8b681df126fac0f8a 301 SMART SM00710 128 151 640.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat DA442_01225 5917dc6303016fd8b681df126fac0f8a 301 SMART SM00710 152 174 3.6 T 14-10-2018 IPR006626 Parallel beta-helix repeat DA442_01225 5917dc6303016fd8b681df126fac0f8a 301 SMART SM00710 181 218 1000.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat DA442_01225 5917dc6303016fd8b681df126fac0f8a 301 SMART SM00710 7 52 4900.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat DA442_01225 5917dc6303016fd8b681df126fac0f8a 301 Gene3D G3DSA:2.160.20.10 6 275 1.5E-16 T 14-10-2018 IPR012334 Pectin lyase fold DA442_01225 5917dc6303016fd8b681df126fac0f8a 301 SUPERFAMILY SSF51126 22 270 3.33E-17 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor DA442_24890 f9033c01ee937e4d9336b97d1986664f 402 Pfam PF07690 Major Facilitator Superfamily 11 269 4.1E-10 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DA442_24890 f9033c01ee937e4d9336b97d1986664f 402 SUPERFAMILY SSF103473 9 388 1.44E-34 T 14-10-2018 IPR036259 MFS transporter superfamily DA442_24890 f9033c01ee937e4d9336b97d1986664f 402 Gene3D G3DSA:1.20.1250.20 8 385 7.6E-24 T 14-10-2018 DA442_09405 0da1411c18049f09db80e27a7af06a6f 40 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 4.6E-18 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_17585 ac4c15854a1e431e267d5d047cbff44d 557 Pfam PF06048 Domain of unknown function (DUF927) 22 277 8.9E-64 T 14-10-2018 IPR009270 Domain of unknown function DUF927 DA442_10660 9b170a0d0420bf1dd25371f2147d41c4 571 Pfam PF00563 EAL domain 358 567 2.7E-38 T 14-10-2018 IPR001633 EAL domain DA442_10660 9b170a0d0420bf1dd25371f2147d41c4 571 SUPERFAMILY SSF141868 356 567 2.22E-45 T 14-10-2018 IPR035919 EAL domain superfamily DA442_10660 9b170a0d0420bf1dd25371f2147d41c4 571 Gene3D G3DSA:3.20.20.450 350 570 3.4E-44 T 14-10-2018 IPR035919 EAL domain superfamily DA442_10660 9b170a0d0420bf1dd25371f2147d41c4 571 SMART SM00052 343 571 6.4E-19 T 14-10-2018 IPR001633 EAL domain DA442_16740 0dfeaa01c9a16513eb6b2e55f8032998 213 ProSitePatterns PS01081 TetR-type HTH domain signature. 31 61 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DA442_16740 0dfeaa01c9a16513eb6b2e55f8032998 213 Gene3D G3DSA:1.10.357.10 56 210 1.1E-36 T 14-10-2018 DA442_16740 0dfeaa01c9a16513eb6b2e55f8032998 213 SUPERFAMILY SSF46689 5 80 3.64E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_16740 0dfeaa01c9a16513eb6b2e55f8032998 213 Gene3D G3DSA:1.10.10.60 4 55 1.4E-23 T 14-10-2018 DA442_16740 0dfeaa01c9a16513eb6b2e55f8032998 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 61 1.7E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DA442_05025 45b41599a35a13cf00b5c5ba9d39c373 139 Gene3D G3DSA:3.10.580.10 1 128 1.4E-30 T 14-10-2018 DA442_05025 45b41599a35a13cf00b5c5ba9d39c373 139 SUPERFAMILY SSF54631 1 127 1.39E-31 T 14-10-2018 DA442_05025 45b41599a35a13cf00b5c5ba9d39c373 139 Pfam PF00571 CBS domain 73 127 1.6E-13 T 14-10-2018 IPR000644 CBS domain DA442_05025 45b41599a35a13cf00b5c5ba9d39c373 139 Pfam PF00571 CBS domain 6 61 4.0E-7 T 14-10-2018 IPR000644 CBS domain DA442_05025 45b41599a35a13cf00b5c5ba9d39c373 139 SMART SM00116 80 128 3.4E-9 T 14-10-2018 IPR000644 CBS domain DA442_05025 45b41599a35a13cf00b5c5ba9d39c373 139 SMART SM00116 13 61 0.032 T 14-10-2018 IPR000644 CBS domain DA442_11100 22962080cb90c0d4e8bc6516188c6a5d 130 Pfam PF16549 Type II secretion system (T2SS) pilotin, S protein 14 127 6.7E-49 T 14-10-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein DA442_11100 22962080cb90c0d4e8bc6516188c6a5d 130 Gene3D G3DSA:3.30.300.250 18 128 3.5E-41 T 14-10-2018 DA442_11100 22962080cb90c0d4e8bc6516188c6a5d 130 PIRSF PIRSF007010 1 130 1.5E-53 T 14-10-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein DA442_09670 3c79353d457798971d820872e8632716 169 Gene3D G3DSA:3.40.50.300 1 150 6.8E-14 T 14-10-2018 DA442_09670 3c79353d457798971d820872e8632716 169 SUPERFAMILY SSF52540 2 127 1.62E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_10280 7098ee32f59fca37c876cd847822215a 46 Pfam PF11665 Protein of unknown function (DUF3265) 19 46 3.3E-11 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_18515 7ec9ab5eb6a96913a87ae1b670f3c2d5 180 Pfam PF07811 TadE-like protein 7 48 3.2E-5 T 14-10-2018 IPR012495 TadE-like DA442_04985 2d7bb2442cadefbedff1946a4f077e2c 100 Gene3D G3DSA:1.10.10.10 1 100 1.1E-39 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_04985 2d7bb2442cadefbedff1946a4f077e2c 100 SUPERFAMILY SSF46767 2 84 3.79E-25 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 DA442_04985 2d7bb2442cadefbedff1946a4f077e2c 100 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 4 83 4.0E-24 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 DA442_14290 bd2206d2cf06f4a6feeeee7964ca5e03 247 Gene3D G3DSA:3.40.1280.10 1 160 2.7E-67 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DA442_14290 bd2206d2cf06f4a6feeeee7964ca5e03 247 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 234 2.3E-109 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DA442_14290 bd2206d2cf06f4a6feeeee7964ca5e03 247 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 7.9E-70 T 14-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DA442_14290 bd2206d2cf06f4a6feeeee7964ca5e03 247 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 247 117.707 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DA442_14290 bd2206d2cf06f4a6feeeee7964ca5e03 247 PIRSF PIRSF000386 1 246 1.1E-100 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DA442_14290 bd2206d2cf06f4a6feeeee7964ca5e03 247 Gene3D G3DSA:1.10.1270.20 161 247 2.9E-34 T 14-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DA442_14290 bd2206d2cf06f4a6feeeee7964ca5e03 247 SUPERFAMILY SSF75217 1 245 2.09E-102 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases DA442_00595 47b69980f004c7fecddeb9c1c8820f89 162 Pfam PF10675 Protein of unknown function (DUF2489) 14 145 1.9E-44 T 14-10-2018 IPR019617 Domain of unknown function DUF2489 DA442_01585 f8412ac66fa41e8f1ebc64a39c99e020 190 SUPERFAMILY SSF51206 15 132 4.06E-21 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like DA442_01585 f8412ac66fa41e8f1ebc64a39c99e020 190 Gene3D G3DSA:2.60.120.10 8 140 5.7E-21 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DA442_01585 f8412ac66fa41e8f1ebc64a39c99e020 190 Pfam PF00027 Cyclic nucleotide-binding domain 30 112 1.1E-8 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain DA442_18405 71ecbd99fd15e4a6cd18bc5662a7e7f6 455 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 55 441 6.7E-140 T 14-10-2018 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 DA442_18405 71ecbd99fd15e4a6cd18bc5662a7e7f6 455 Pfam PF03606 C4-dicarboxylate anaerobic carrier 2 451 3.8E-124 T 14-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 DA442_09330 e446610c7e2751c276781f5b9d85507b 31 Pfam PF13333 Integrase core domain 3 31 6.3E-7 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DA442_18675 d157013d2bbcbadde36a36645bace88f 186 Gene3D G3DSA:3.40.630.30 4 174 5.0E-27 T 14-10-2018 DA442_18675 d157013d2bbcbadde36a36645bace88f 186 SUPERFAMILY SSF55729 18 161 1.13E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_18675 d157013d2bbcbadde36a36645bace88f 186 Pfam PF13302 Acetyltransferase (GNAT) domain 20 159 2.1E-11 T 14-10-2018 IPR000182 GNAT domain DA442_22070 d4e02db088651c5880b798b2250331f3 129 Pfam PF07361 Cytochrome b562 24 119 3.6E-30 T 14-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 DA442_22070 d4e02db088651c5880b798b2250331f3 129 SUPERFAMILY SSF47175 24 119 2.94E-30 T 14-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 DA442_22070 d4e02db088651c5880b798b2250331f3 129 Gene3D G3DSA:1.20.120.10 18 126 4.1E-14 T 14-10-2018 DA442_21505 dc18821e466cc9b5a3b8f4f8c0d77302 133 Pfam PF04892 VanZ like family 40 121 6.7E-9 T 14-10-2018 IPR006976 VanZ-like DA442_14730 461c66d24af026d1942db38c3445ba7a 265 Pfam PF09955 Predicted integral membrane protein (DUF2189) 82 195 1.3E-27 T 14-10-2018 IPR018692 Predicted integral membrane protein DUF2189 DA442_14185 f76a0dd491250c34052c7ba072bffbdf 256 Pfam PF01061 ABC-2 type transporter 8 218 2.0E-38 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 DA442_14185 f76a0dd491250c34052c7ba072bffbdf 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 1.9E-7 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 DA442_14185 f76a0dd491250c34052c7ba072bffbdf 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 102 127 1.9E-7 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 DA442_14185 f76a0dd491250c34052c7ba072bffbdf 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 1.9E-7 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 DA442_14185 f76a0dd491250c34052c7ba072bffbdf 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 1.9E-7 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 DA442_14185 f76a0dd491250c34052c7ba072bffbdf 256 PIRSF PIRSF006648 5 253 3.2E-27 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 DA442_17395 5ea35f4585ce116a13073882ed724fa9 318 SUPERFAMILY SSF56935 41 318 5.13E-5 T 14-10-2018 DA442_17395 5ea35f4585ce116a13073882ed724fa9 318 PIRSF PIRSF028696 1 318 9.8E-130 T 14-10-2018 IPR016896 Protein of unknown function DUF2860 DA442_17395 5ea35f4585ce116a13073882ed724fa9 318 Pfam PF11059 Protein of unknown function (DUF2860) 26 317 4.8E-115 T 14-10-2018 IPR016896 Protein of unknown function DUF2860 DA442_06225 705955db7788418d8eadd6c57bd344f4 141 Gene3D G3DSA:3.10.450.40 74 129 2.4E-6 T 14-10-2018 DA442_10230 a66e2a7880e29c2a9a818c77def9fb5b 282 Pfam PF11185 Protein of unknown function (DUF2971) 94 194 4.0E-10 T 14-10-2018 IPR021352 Protein of unknown function DUF2971 DA442_20625 fd84bc3b94c544fa334641532b941a92 297 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 281 1.5E-31 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DA442_07640 b8827b554bb1fa93b5d2c69b17de6134 250 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 59 180 2.4E-9 T 14-10-2018 IPR032871 AHH domain-containing protein DA442_04750 57b4e49eea9d8152c8c8612daa36cac9 489 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 5 475 45.823 T 14-10-2018 IPR003846 Uncharacterised protein family UPF0061 DA442_04750 57b4e49eea9d8152c8c8612daa36cac9 489 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 7 458 2.7E-157 T 14-10-2018 IPR003846 Uncharacterised protein family UPF0061 DA442_25175 1aba62d920c40b296ebce20f40136691 959 Gene3D G3DSA:1.50.10.10 279 587 8.7E-28 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 DA442_25175 1aba62d920c40b296ebce20f40136691 959 SUPERFAMILY SSF48208 254 679 2.44E-36 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 DA442_25175 1aba62d920c40b296ebce20f40136691 959 Pfam PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain 364 509 1.7E-6 T 14-10-2018 IPR035396 Alpha-L-rhamnosidase, six-hairpin glycosidase domain DA442_24015 5ecb8f59aff79b7db4205f64c7613fab 276 Pfam PF10670 Domain of unknown function (DUF4198) 24 251 5.1E-49 T 14-10-2018 IPR019613 Protein of unknown function DUF4198 DA442_21520 5e5b3ce9a885ab25e935331483a58309 344 SMART SM00829 20 338 5.3E-5 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DA442_21520 5e5b3ce9a885ab25e935331483a58309 344 Gene3D G3DSA:3.90.180.10 17 338 1.1E-127 T 14-10-2018 DA442_21520 5e5b3ce9a885ab25e935331483a58309 344 Pfam PF16884 N-terminal domain of oxidoreductase 7 114 8.6E-40 T 14-10-2018 DA442_21520 5e5b3ce9a885ab25e935331483a58309 344 Gene3D G3DSA:3.40.50.720 129 310 1.1E-127 T 14-10-2018 DA442_21520 5e5b3ce9a885ab25e935331483a58309 344 Pfam PF00107 Zinc-binding dehydrogenase 160 296 1.5E-21 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DA442_21520 5e5b3ce9a885ab25e935331483a58309 344 SUPERFAMILY SSF50129 5 145 8.57E-42 T 14-10-2018 IPR011032 GroES-like superfamily DA442_21520 5e5b3ce9a885ab25e935331483a58309 344 SUPERFAMILY SSF51735 126 305 8.73E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DA442_25755 c54afbd296ad1fb3ce2c6198c94c1342 223 Pfam PF06912 Protein of unknown function (DUF1275) 13 208 6.7E-31 T 14-10-2018 IPR010699 Protein of unknown function DUF1275 DA442_21145 71b7eead576daf6cd393a385e40b6bee 412 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 11 397 2.0E-62 T 14-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 DA442_21145 71b7eead576daf6cd393a385e40b6bee 412 Gene3D G3DSA:1.10.4160.10 4 410 2.6E-45 T 14-10-2018 IPR038271 Purine-cytosine permease superfamily DA442_23985 e396ec641b21d02a7dfe1568390aaffb 184 Pfam PF01618 MotA/TolQ/ExbB proton channel family 73 177 4.8E-22 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel DA442_17575 d6e08e8d0316cf69402ae0367c69323c 69 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 5 66 1.0E-17 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DA442_17575 d6e08e8d0316cf69402ae0367c69323c 69 SUPERFAMILY SSF47413 2 67 7.97E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DA442_17575 d6e08e8d0316cf69402ae0367c69323c 69 Gene3D G3DSA:1.10.260.40 1 69 8.8E-9 T 14-10-2018 DA442_04060 da8461a8599cad61e1e0ddb10063f9bc 105 Pfam PF04316 Anti-sigma-28 factor, FlgM 42 95 1.0E-17 T 14-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal DA442_04060 da8461a8599cad61e1e0ddb10063f9bc 105 SUPERFAMILY SSF101498 2 98 2.48E-21 T 14-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily DA442_04060 da8461a8599cad61e1e0ddb10063f9bc 105 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 4 98 1.3E-23 T 14-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 DA442_18480 d12605e869b7ddac70ff3f45d6009c40 447 Pfam PF13629 Pilus formation protein N terminal region 26 94 1.9E-16 T 14-10-2018 IPR032789 Pilus formation protein, N-terminal DA442_18480 d12605e869b7ddac70ff3f45d6009c40 447 PRINTS PR00811 Bacterial general secretion pathway protein D signature 189 199 3.8E-6 T 14-10-2018 IPR001775 GspD/PilQ family DA442_18480 d12605e869b7ddac70ff3f45d6009c40 447 PRINTS PR00811 Bacterial general secretion pathway protein D signature 367 385 3.8E-6 T 14-10-2018 IPR001775 GspD/PilQ family DA442_18480 d12605e869b7ddac70ff3f45d6009c40 447 Pfam PF00263 Bacterial type II and III secretion system protein 247 402 2.0E-42 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 DA442_10830 637fe1f0882d1913935cdbde99353438 136 Pfam PF03918 Cytochrome C biogenesis protein 28 135 6.8E-41 T 14-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family DA442_10830 637fe1f0882d1913935cdbde99353438 136 Gene3D G3DSA:1.10.8.640 28 113 3.7E-32 T 14-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily DA442_18760 1dd54020062481a763228d17b2a267d2 291 Gene3D G3DSA:3.40.50.12370 9 290 2.9E-23 T 14-10-2018 DA442_18760 1dd54020062481a763228d17b2a267d2 291 Pfam PF00582 Universal stress protein family 154 286 2.1E-7 T 14-10-2018 IPR006016 UspA DA442_18760 1dd54020062481a763228d17b2a267d2 291 SUPERFAMILY SSF52402 153 287 8.04E-10 T 14-10-2018 DA442_18670 e6c179ea5209b2aaee641af4773b0dd0 161 Pfam PF00583 Acetyltransferase (GNAT) family 32 138 1.2E-20 T 14-10-2018 IPR000182 GNAT domain DA442_18670 e6c179ea5209b2aaee641af4773b0dd0 161 SUPERFAMILY SSF55729 5 153 2.92E-38 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_18670 e6c179ea5209b2aaee641af4773b0dd0 161 Gene3D G3DSA:3.40.630.30 2 160 4.4E-49 T 14-10-2018 DA442_07390 8ecc6c1bfce9e8abd98540be1400f7e3 285 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 284 1.1E-99 T 14-10-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 DA442_07390 8ecc6c1bfce9e8abd98540be1400f7e3 285 Pfam PF08543 Phosphomethylpyrimidine kinase 93 252 1.7E-19 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 DA442_07390 8ecc6c1bfce9e8abd98540be1400f7e3 285 SUPERFAMILY SSF53613 1 271 7.64E-66 T 14-10-2018 IPR029056 Ribokinase-like DA442_07390 8ecc6c1bfce9e8abd98540be1400f7e3 285 Gene3D G3DSA:3.40.1190.20 1 285 6.5E-84 T 14-10-2018 IPR029056 Ribokinase-like DA442_23350 5b8318630a0a4f7d02c275e036c1b0c6 285 SMART SM00382 30 208 1.3E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_23350 5b8318630a0a4f7d02c275e036c1b0c6 285 SUPERFAMILY SSF52540 4 222 2.02E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_23350 5b8318630a0a4f7d02c275e036c1b0c6 285 Gene3D G3DSA:3.40.50.300 2 248 7.0E-46 T 14-10-2018 DA442_23350 5b8318630a0a4f7d02c275e036c1b0c6 285 Pfam PF00005 ABC transporter 21 158 5.5E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_05755 17a3c31d35d8d7deb14190d2ff874d97 139 Pfam PF12680 SnoaL-like domain 8 108 8.7E-13 T 14-10-2018 IPR037401 SnoaL-like domain DA442_05755 17a3c31d35d8d7deb14190d2ff874d97 139 SUPERFAMILY SSF54427 5 129 2.7E-23 T 14-10-2018 IPR032710 NTF2-like domain superfamily DA442_05755 17a3c31d35d8d7deb14190d2ff874d97 139 Gene3D G3DSA:3.10.450.50 4 125 2.7E-21 T 14-10-2018 DA442_17705 552913ab7f944c29bda5d8dccd0fda63 405 SUPERFAMILY SSF56935 42 405 9.89E-10 T 14-10-2018 DA442_11295 839ffbbb7055c0f4cf1ac73179543c91 376 Pfam PF03916 Polysulphide reductase, NrfD 9 318 9.2E-18 T 14-10-2018 IPR005614 NrfD family DA442_23320 59b7ebdcdc5e82933f886ab19b6cfeba 275 Pfam PF14247 Putative metallopeptidase 27 249 4.7E-67 T 14-10-2018 IPR025644 Putative metallopeptidase DA442_00795 a86a39fb8065beaa3b42e644721746a1 130 Pfam PF06476 Protein of unknown function (DUF1090) 16 117 3.2E-32 T 14-10-2018 IPR009468 Protein of unknown function DUF1090 DA442_06700 ee235cf41697f3191b0f0b44ac5ddb90 176 PIRSF PIRSF006135 1 176 4.0E-54 T 14-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 DA442_06700 ee235cf41697f3191b0f0b44ac5ddb90 176 Gene3D G3DSA:3.40.50.300 3 176 8.6E-58 T 14-10-2018 DA442_06700 ee235cf41697f3191b0f0b44ac5ddb90 176 SUPERFAMILY SSF52540 4 176 1.74E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_06700 ee235cf41697f3191b0f0b44ac5ddb90 176 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 4 174 7.6E-59 T 14-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 DA442_06395 be5a9d3bec2edc6a59bede491db6e236 421 Pfam PF06097 Bacterial protein of unknown function (DUF945) 5 410 1.7E-39 T 14-10-2018 IPR010352 Protein of unknown function DUF945 DA442_24585 f6df6f237cb7414dfc992f2a8de801bb 179 Pfam PF10135 Rod binding protein 54 104 3.1E-12 T 14-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal DA442_19725 1589036791dd44b237555c36edb94b64 162 Gene3D G3DSA:3.40.50.1010 1 162 6.1E-64 T 14-10-2018 DA442_19725 1589036791dd44b237555c36edb94b64 162 Pfam PF01936 NYN domain 8 156 3.5E-38 T 14-10-2018 IPR021139 NYN domain, limkain-b1-type DA442_13560 4c6c2aae7719f9f53a88916b19e52e62 272 Pfam PF03837 RecT family 38 193 4.4E-23 T 14-10-2018 IPR018330 RecT family GO:0003677|GO:0006259 DA442_13560 4c6c2aae7719f9f53a88916b19e52e62 272 TIGRFAM TIGR01913 bet_lambda: phage recombination protein Bet 15 189 5.0E-25 T 14-10-2018 IPR010183 Bacteriophage lambda, Bet DA442_07590 c28fb6805c46ce2db61e7740fe8e880b 343 Pfam PF06996 Type VI secretion, TssG 21 328 4.2E-84 T 14-10-2018 IPR010732 Type VI secretion, TssG-like DA442_07590 c28fb6805c46ce2db61e7740fe8e880b 343 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 20 328 1.0E-97 T 14-10-2018 IPR010732 Type VI secretion, TssG-like DA442_12715 9e8f8c6de7e8f2e54489205818473b5c 103 Pfam PF00034 Cytochrome c 27 103 1.4E-10 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_12715 9e8f8c6de7e8f2e54489205818473b5c 103 Gene3D G3DSA:1.10.760.10 22 103 9.1E-27 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_12715 9e8f8c6de7e8f2e54489205818473b5c 103 PRINTS PR00605 Class IC cytochrome C signature 77 99 8.5E-6 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 DA442_12715 9e8f8c6de7e8f2e54489205818473b5c 103 PRINTS PR00605 Class IC cytochrome C signature 32 43 8.5E-6 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 DA442_12715 9e8f8c6de7e8f2e54489205818473b5c 103 SUPERFAMILY SSF46626 12 102 4.3E-23 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_00405 6a22e687223fbb2550c3ed7a27111f60 175 SUPERFAMILY SSF47240 1 160 1.87E-58 T 14-10-2018 IPR009078 Ferritin-like superfamily DA442_00405 6a22e687223fbb2550c3ed7a27111f60 175 Gene3D G3DSA:1.20.1260.10 1 175 2.0E-53 T 14-10-2018 IPR012347 Ferritin-like DA442_00405 6a22e687223fbb2550c3ed7a27111f60 175 Pfam PF00210 Ferritin-like domain 8 143 6.1E-40 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 DA442_05360 ff7c404ffc658502291838718ff45030 106 Pfam PF09413 Putative prokaryotic signal transducing protein 2 68 5.3E-6 T 14-10-2018 IPR018551 Domain of unknown function DUF2007 DA442_05360 ff7c404ffc658502291838718ff45030 106 ProSitePatterns PS01358 Zinc finger RanBP2-type signature. 80 99 - T 14-10-2018 IPR001876 Zinc finger, RanBP2-type DA442_25895 fdc1c3ada69165141475347888dd1b48 339 Pfam PF02628 Cytochrome oxidase assembly protein 6 315 3.1E-82 T 14-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 DA442_19220 ec9ee23098d5d93a5ac84af8f6d77ea3 198 Pfam PF09997 Predicted membrane protein (DUF2238) 41 176 1.4E-51 T 14-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 DA442_19220 ec9ee23098d5d93a5ac84af8f6d77ea3 198 PIRSF PIRSF020606 1 198 6.5E-83 T 14-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 DA442_12855 071187246e16da1d093296d27cb8a9b6 528 Pfam PF03806 AbgT putative transporter family 19 526 6.4E-226 T 14-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 DA442_07930 4b969b61b20c644b4d1e91647606c5c8 700 Gene3D G3DSA:3.30.1950.10 44 101 2.9E-15 T 14-10-2018 DA442_07930 4b969b61b20c644b4d1e91647606c5c8 700 Pfam PF10531 SLBB domain 590 633 4.2E-10 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DA442_07930 4b969b61b20c644b4d1e91647606c5c8 700 Pfam PF10531 SLBB domain 495 538 2.7E-4 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DA442_07930 4b969b61b20c644b4d1e91647606c5c8 700 Pfam PF10531 SLBB domain 212 253 8.5E-8 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DA442_07930 4b969b61b20c644b4d1e91647606c5c8 700 Pfam PF10531 SLBB domain 396 446 1.0E-7 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DA442_07930 4b969b61b20c644b4d1e91647606c5c8 700 Pfam PF10531 SLBB domain 105 151 2.5E-4 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DA442_07930 4b969b61b20c644b4d1e91647606c5c8 700 Pfam PF10531 SLBB domain 299 352 9.7E-12 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DA442_07930 4b969b61b20c644b4d1e91647606c5c8 700 Gene3D G3DSA:3.10.560.10 578 671 1.1E-18 T 14-10-2018 DA442_07930 4b969b61b20c644b4d1e91647606c5c8 700 Gene3D G3DSA:3.10.560.10 482 577 2.0E-16 T 14-10-2018 DA442_07930 4b969b61b20c644b4d1e91647606c5c8 700 Gene3D G3DSA:3.10.560.10 388 473 4.7E-14 T 14-10-2018 DA442_07930 4b969b61b20c644b4d1e91647606c5c8 700 Gene3D G3DSA:3.10.560.10 200 288 2.3E-17 T 14-10-2018 DA442_07930 4b969b61b20c644b4d1e91647606c5c8 700 Gene3D G3DSA:3.10.560.10 289 378 5.1E-15 T 14-10-2018 DA442_07930 4b969b61b20c644b4d1e91647606c5c8 700 Gene3D G3DSA:3.10.560.10 102 182 2.9E-15 T 14-10-2018 DA442_07930 4b969b61b20c644b4d1e91647606c5c8 700 Pfam PF02563 Polysaccharide biosynthesis/export protein 27 91 3.4E-10 T 14-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 DA442_01630 9d5f46e66ac0341a85d64b9f16615713 164 Pfam PF11736 Protein of unknown function (DUF3299) 30 159 7.8E-44 T 14-10-2018 IPR021727 Protein of unknown function DUF3299 DA442_01630 9d5f46e66ac0341a85d64b9f16615713 164 Gene3D G3DSA:2.40.50.870 23 164 3.2E-46 T 14-10-2018 DA442_12320 6328b10367d880ae7c54a04484c06bb1 145 Pfam PF10975 Protein of unknown function (DUF2802) 50 117 5.3E-23 T 14-10-2018 IPR021244 Protein of unknown function DUF2802 DA442_25320 a6438778674618e9a7339b51a3857214 90 Pfam PF07383 Protein of unknown function (DUF1496) 36 87 2.9E-23 T 14-10-2018 IPR009971 Protein of unknown function DUF1496 DA442_05395 3bb8e39c1513b4891bb517df0bfc65f3 263 Pfam PF08241 Methyltransferase domain 52 148 2.9E-13 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 DA442_05395 3bb8e39c1513b4891bb517df0bfc65f3 263 SUPERFAMILY SSF53335 7 251 1.7E-34 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_05395 3bb8e39c1513b4891bb517df0bfc65f3 263 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 3 259 40.418 T 14-10-2018 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 DA442_05395 3bb8e39c1513b4891bb517df0bfc65f3 263 Gene3D G3DSA:3.40.50.150 9 263 6.4E-57 T 14-10-2018 DA442_21005 087c2773dab87a25b269ac56b6c8e005 106 SMART SM00465 7 86 1.1E-4 T 14-10-2018 IPR000305 GIY-YIG endonuclease DA442_21005 087c2773dab87a25b269ac56b6c8e005 106 Pfam PF01541 GIY-YIG catalytic domain 9 80 1.4E-16 T 14-10-2018 IPR000305 GIY-YIG endonuclease DA442_21005 087c2773dab87a25b269ac56b6c8e005 106 SUPERFAMILY SSF82771 9 79 2.62E-14 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 DA442_21005 087c2773dab87a25b269ac56b6c8e005 106 Gene3D G3DSA:3.40.1440.10 3 102 1.2E-28 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 DA442_22810 8199b82546c7a5695bd16a09d2745bb8 81 Pfam PF11730 Protein of unknown function (DUF3297) 10 80 1.9E-38 T 14-10-2018 IPR021724 Protein of unknown function DUF3297 DA442_08825 e710d54c9caf81f069bf259391018d5a 237 ProDom PD023059 PLASMID TYPE PROTEINS YOP III YSCK VIRULENCE K TRANSLOCATION PSCK 30 236 3.0E-119 T 14-10-2018 IPR009510 Type III secretion system, secretion protein K GO:0009405 DA442_08825 e710d54c9caf81f069bf259391018d5a 237 Pfam PF06578 YOP proteins translocation protein K (YscK) 26 237 2.4E-88 T 14-10-2018 IPR009510 Type III secretion system, secretion protein K GO:0009405 DA442_11260 f0bbab2a550a9e3012c41178179a0e32 171 ProSitePatterns PS00194 Thioredoxin family active site. 69 87 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 DA442_11260 f0bbab2a550a9e3012c41178179a0e32 171 SUPERFAMILY SSF52833 41 160 9.62E-24 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_11260 f0bbab2a550a9e3012c41178179a0e32 171 Pfam PF00085 Thioredoxin 52 157 9.0E-12 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 DA442_11260 f0bbab2a550a9e3012c41178179a0e32 171 Gene3D G3DSA:3.40.30.10 32 165 4.6E-19 T 14-10-2018 DA442_11190 5818c0a1e4657b3682a9340e8fcf1e86 342 Gene3D G3DSA:3.20.20.210 1 342 8.3E-137 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 DA442_11190 5818c0a1e4657b3682a9340e8fcf1e86 342 PIRSF PIRSF005632 1 342 2.1E-196 T 14-10-2018 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit DA442_11190 5818c0a1e4657b3682a9340e8fcf1e86 342 SUPERFAMILY SSF51726 3 338 2.62E-70 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 DA442_11190 5818c0a1e4657b3682a9340e8fcf1e86 342 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 5 329 3.5E-37 T 14-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 DA442_05115 5dc5d1b39f238d5a87c785bca99880b7 405 Pfam PF12704 MacB-like periplasmic core domain 32 209 8.1E-14 T 14-10-2018 IPR025857 MacB-like periplasmic core domain DA442_05115 5dc5d1b39f238d5a87c785bca99880b7 405 Pfam PF02687 FtsX-like permease family 299 398 2.2E-11 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DA442_05115 5dc5d1b39f238d5a87c785bca99880b7 405 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 7 405 3.3E-134 T 14-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 DA442_06175 6e85094f4febf4cc446ca65330080d73 148 Pfam PF03724 META domain 34 141 7.5E-28 T 14-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ DA442_06175 6e85094f4febf4cc446ca65330080d73 148 Gene3D G3DSA:2.40.128.270 40 143 5.2E-29 T 14-10-2018 IPR038670 HslJ-like superfamily DA442_06525 aa93e963a346d91b5dd66f01138a8c3f 241 Pfam PF12119 Protein of unknown function (DUF3581) 1 217 9.3E-100 T 14-10-2018 IPR021974 Protein of unknown function DUF3581 DA442_16880 94844aba25a3cd38059fa15a1727cc93 405 Pfam PF07690 Major Facilitator Superfamily 18 339 1.3E-18 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DA442_16880 94844aba25a3cd38059fa15a1727cc93 405 Gene3D G3DSA:1.20.1250.20 207 401 6.5E-11 T 14-10-2018 DA442_16880 94844aba25a3cd38059fa15a1727cc93 405 Gene3D G3DSA:1.20.1250.20 8 200 2.4E-14 T 14-10-2018 DA442_16880 94844aba25a3cd38059fa15a1727cc93 405 SUPERFAMILY SSF103473 9 399 6.93E-32 T 14-10-2018 IPR036259 MFS transporter superfamily DA442_08995 443209b55a7db708146e54000bfbd82d 553 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 84 540 2.7E-134 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 DA442_08995 443209b55a7db708146e54000bfbd82d 553 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 45 540 9.9E-171 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 DA442_20795 40a3d95f3cfb6e41d42eca4c41771f46 392 Gene3D G3DSA:1.20.1250.20 2 386 1.8E-41 T 14-10-2018 DA442_20795 40a3d95f3cfb6e41d42eca4c41771f46 392 Pfam PF07690 Major Facilitator Superfamily 254 381 2.6E-13 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DA442_20795 40a3d95f3cfb6e41d42eca4c41771f46 392 Pfam PF07690 Major Facilitator Superfamily 11 241 1.9E-18 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DA442_20795 40a3d95f3cfb6e41d42eca4c41771f46 392 SUPERFAMILY SSF103473 4 381 1.22E-43 T 14-10-2018 IPR036259 MFS transporter superfamily DA442_17665 c10dd5864a2043e72c8ece5422c26f6f 97 Pfam PF03889 Domain of unknown function 22 59 2.2E-20 T 14-10-2018 IPR005589 Alternative ribosome-rescue factor A GO:0072344 DA442_11695 b77996b6fe3ac94dc72ceda7c02148fe 300 Gene3D G3DSA:1.10.3720.10 96 296 8.5E-20 T 14-10-2018 IPR035906 MetI-like superfamily DA442_11695 b77996b6fe3ac94dc72ceda7c02148fe 300 SUPERFAMILY SSF161098 97 281 1.44E-26 T 14-10-2018 IPR035906 MetI-like superfamily DA442_11695 b77996b6fe3ac94dc72ceda7c02148fe 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 298 3.1E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DA442_11695 b77996b6fe3ac94dc72ceda7c02148fe 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 69 5.3E-15 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DA442_22315 65c48d69d0d411a0ce57021f254e3c18 67 Pfam PF07869 Protein of unknown function (DUF1656) 4 58 8.7E-16 T 14-10-2018 IPR012451 Protein of unknown function DUF1656 DA442_17895 315b7bc31f0c16869314b280bb40e5a7 275 SUPERFAMILY SSF53850 24 270 9.83E-66 T 14-10-2018 DA442_17895 315b7bc31f0c16869314b280bb40e5a7 275 Pfam PF12727 PBP superfamily domain 40 254 1.2E-36 T 14-10-2018 IPR024370 PBP domain DA442_17895 315b7bc31f0c16869314b280bb40e5a7 275 Gene3D G3DSA:3.40.190.10 97 231 3.3E-81 T 14-10-2018 DA442_17895 315b7bc31f0c16869314b280bb40e5a7 275 Gene3D G3DSA:3.40.190.10 26 269 3.3E-81 T 14-10-2018 DA442_17895 315b7bc31f0c16869314b280bb40e5a7 275 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 18 270 3.3E-67 T 14-10-2018 IPR011862 Phosphate binding protein GO:0042301 DA442_09510 08cd5cf36cafb47771bf5cd7ab890ad0 42 Pfam PF11665 Protein of unknown function (DUF3265) 15 42 2.0E-12 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_12470 1d3ad8dc8c9a8983d3bfe9ea1a73dfc1 136 TIGRFAM TIGR00208 fliS: flagellar protein FliS 4 122 6.2E-24 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 DA442_12470 1d3ad8dc8c9a8983d3bfe9ea1a73dfc1 136 PIRSF PIRSF039090 1 133 1.6E-42 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 DA442_12470 1d3ad8dc8c9a8983d3bfe9ea1a73dfc1 136 Gene3D G3DSA:1.20.120.340 2 126 1.1E-39 T 14-10-2018 DA442_12470 1d3ad8dc8c9a8983d3bfe9ea1a73dfc1 136 Pfam PF02561 Flagellar protein FliS 6 122 2.4E-37 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 DA442_12470 1d3ad8dc8c9a8983d3bfe9ea1a73dfc1 136 SUPERFAMILY SSF101116 6 127 4.05E-39 T 14-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 DA442_17795 2932f3ee5caf81c669763f8ab5750b8e 122 Gene3D G3DSA:3.20.160.10 1 122 5.4E-55 T 14-10-2018 IPR038604 Type III effector HopJ superfamily DA442_17795 2932f3ee5caf81c669763f8ab5750b8e 122 Pfam PF08888 HopJ type III effector protein 11 119 3.2E-49 T 14-10-2018 IPR014984 HopJ type III effector protein DA442_16910 9871e65429b307f497c5913806438425 336 SUPERFAMILY SSF53474 41 324 4.19E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_16910 9871e65429b307f497c5913806438425 336 Gene3D G3DSA:3.40.50.1820 29 332 1.0E-50 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_16910 9871e65429b307f497c5913806438425 336 Pfam PF12146 Serine aminopeptidase, S33 53 310 5.7E-60 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 DA442_15765 6ce09169e4cd3489b16b3d6c64b12207 238 Pfam PF13309 HTH domain 174 231 1.7E-18 T 14-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain DA442_15765 6ce09169e4cd3489b16b3d6c64b12207 238 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 30 143 1.0E-61 T 14-10-2018 IPR013559 YheO-like DA442_15765 6ce09169e4cd3489b16b3d6c64b12207 238 Pfam PF08348 YheO-like PAS domain 31 139 9.3E-36 T 14-10-2018 IPR013559 YheO-like DA442_19905 40c8b236a1f5a312c14f4a3effc62917 126 Pfam PF00034 Cytochrome c 54 122 1.0E-7 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_19905 40c8b236a1f5a312c14f4a3effc62917 126 SUPERFAMILY SSF46626 40 123 1.02E-19 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_19905 40c8b236a1f5a312c14f4a3effc62917 126 Gene3D G3DSA:1.10.760.10 42 125 1.2E-22 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DA442_14215 30ce1ce80f69be7ca60c44adf95fe6ed 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 7.3E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DA442_14215 30ce1ce80f69be7ca60c44adf95fe6ed 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 7.3E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DA442_14215 30ce1ce80f69be7ca60c44adf95fe6ed 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 8.1E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DA442_14215 30ce1ce80f69be7ca60c44adf95fe6ed 204 SUPERFAMILY SSF46689 8 84 8.48E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DA442_14215 30ce1ce80f69be7ca60c44adf95fe6ed 204 SUPERFAMILY SSF48498 89 197 1.11E-10 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DA442_14215 30ce1ce80f69be7ca60c44adf95fe6ed 204 Gene3D G3DSA:1.10.357.10 1 204 3.1E-87 T 14-10-2018 DA442_22965 cf51cddb0d152114a15c712cf8169aa6 325 Gene3D G3DSA:3.40.1190.20 1 320 1.9E-75 T 14-10-2018 IPR029056 Ribokinase-like DA442_22965 cf51cddb0d152114a15c712cf8169aa6 325 Pfam PF00294 pfkB family carbohydrate kinase 1 314 8.4E-62 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB DA442_22965 cf51cddb0d152114a15c712cf8169aa6 325 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 269 282 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DA442_22965 cf51cddb0d152114a15c712cf8169aa6 325 SUPERFAMILY SSF53613 1 314 2.34E-66 T 14-10-2018 IPR029056 Ribokinase-like DA442_14770 f8f9fdca1fafe81f487e5f1615a7f662 346 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 14-10-2018 IPR001482 Type II/IV secretion system protein DA442_14770 f8f9fdca1fafe81f487e5f1615a7f662 346 Pfam PF00437 Type II/IV secretion system protein 12 270 1.1E-47 T 14-10-2018 IPR001482 Type II/IV secretion system protein DA442_14770 f8f9fdca1fafe81f487e5f1615a7f662 346 Gene3D G3DSA:3.30.450.90 1 100 1.3E-36 T 14-10-2018 DA442_14770 f8f9fdca1fafe81f487e5f1615a7f662 346 SUPERFAMILY SSF52540 5 335 4.29E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_14770 f8f9fdca1fafe81f487e5f1615a7f662 346 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 333 6.1E-153 T 14-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 DA442_14770 f8f9fdca1fafe81f487e5f1615a7f662 346 Gene3D G3DSA:3.40.50.300 101 344 4.3E-103 T 14-10-2018 DA442_11700 b35e8e61415bef43f4a31cf0e4c5589f 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 1.9E-41 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DA442_11700 b35e8e61415bef43f4a31cf0e4c5589f 306 Gene3D G3DSA:1.10.3720.10 84 301 5.7E-22 T 14-10-2018 IPR035906 MetI-like superfamily DA442_11700 b35e8e61415bef43f4a31cf0e4c5589f 306 SUPERFAMILY SSF161098 88 291 1.53E-20 T 14-10-2018 IPR035906 MetI-like superfamily DA442_09295 d86ff97eacb0195629add9b67dfb5a65 67 Gene3D G3DSA:3.10.180.10 1 66 1.3E-6 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DA442_12700 685144272e963bdee50036002e9b92b9 228 Pfam PF06930 Protein of unknown function (DUF1282) 14 223 6.7E-41 T 14-10-2018 IPR009698 Protein of unknown function DUF1282 DA442_08375 47fa2b0d38d0fdbeb622de4b9fa40e5d 72 Pfam PF11197 Protein of unknown function (DUF2835) 4 70 3.1E-28 T 14-10-2018 IPR021363 Protein of unknown function DUF2835 DA442_19440 c2cd633148a6c1a154afd58129d2b1cc 373 SUPERFAMILY SSF56925 217 342 4.71E-5 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DA442_19440 c2cd633148a6c1a154afd58129d2b1cc 373 Pfam PF13729 F plasmid transfer operon, TraF, protein 49 289 2.1E-67 T 14-10-2018 IPR032811 Putative conjugal transfer protein TraF-related DA442_07600 dc7634b90f30b7a67fea31024444c4bc 1137 Pfam PF06761 Intracellular multiplication and human macrophage-killing 506 763 1.2E-43 T 14-10-2018 IPR009612 ImcF-related DA442_07600 dc7634b90f30b7a67fea31024444c4bc 1137 Pfam PF14331 ImcF-related N-terminal domain 162 416 1.6E-53 T 14-10-2018 IPR025743 ImcF-related, N-terminal domain DA442_07600 dc7634b90f30b7a67fea31024444c4bc 1137 Pfam PF06744 Type VI secretion protein IcmF C-terminal 887 1086 4.4E-46 T 14-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal DA442_07600 dc7634b90f30b7a67fea31024444c4bc 1137 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 100 1135 1.2E-174 T 14-10-2018 IPR017731 Type VI secretion system, IcmF DA442_02110 ce9b655a87ea9b46c44ac6e783a71e3f 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 212 226 1.2E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DA442_02110 ce9b655a87ea9b46c44ac6e783a71e3f 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 1.2E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DA442_02110 ce9b655a87ea9b46c44ac6e783a71e3f 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 45 60 1.2E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DA442_02110 ce9b655a87ea9b46c44ac6e783a71e3f 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 90 103 1.2E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DA442_02110 ce9b655a87ea9b46c44ac6e783a71e3f 271 Pfam PF00561 alpha/beta hydrolase fold 23 253 8.6E-21 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DA442_02110 ce9b655a87ea9b46c44ac6e783a71e3f 271 PRINTS PR00412 Epoxide hydrolase signature 45 60 5.7E-8 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 DA442_02110 ce9b655a87ea9b46c44ac6e783a71e3f 271 PRINTS PR00412 Epoxide hydrolase signature 243 265 5.7E-8 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 DA442_02110 ce9b655a87ea9b46c44ac6e783a71e3f 271 PRINTS PR00412 Epoxide hydrolase signature 104 117 5.7E-8 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 DA442_02110 ce9b655a87ea9b46c44ac6e783a71e3f 271 SUPERFAMILY SSF53474 1 268 2.7E-61 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_02110 ce9b655a87ea9b46c44ac6e783a71e3f 271 Gene3D G3DSA:3.40.50.1820 1 271 5.9E-56 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_09065 49ebaa91745f29ce3f86a7d0ced26aba 121 PIRSF PIRSF039020 1 121 2.7E-43 T 14-10-2018 IPR026275 Glyoxalase/dioxygenase/EhpR DA442_09065 49ebaa91745f29ce3f86a7d0ced26aba 121 Gene3D G3DSA:3.10.180.10 1 120 1.9E-36 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DA442_09065 49ebaa91745f29ce3f86a7d0ced26aba 121 SUPERFAMILY SSF54593 4 118 7.19E-16 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DA442_04260 24e0b504d4ddc6dd179107e39e1b1dda 244 Pfam PF07556 Protein of unknown function (DUF1538) 21 241 3.8E-72 T 14-10-2018 IPR011435 Protein of unknown function DUF1538 DA442_23625 5c794c95c9d27fef3b34e49cb40e077d 388 Pfam PF14583 Oligogalacturonate lyase 1 385 1.3E-242 T 14-10-2018 IPR027946 Oligogalacturonate lyase domain GO:0045490|GO:0047487 KEGG: 00040+4.2.2.6 DA442_23625 5c794c95c9d27fef3b34e49cb40e077d 388 SUPERFAMILY SSF82171 15 382 5.49E-25 T 14-10-2018 DA442_23625 5c794c95c9d27fef3b34e49cb40e077d 388 Gene3D G3DSA:2.130.10.10 1 388 8.5E-171 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 DA442_24185 69803e2e23b16a977711d3370a23b0e3 203 Pfam PF11140 Protein of unknown function (DUF2913) 13 193 6.2E-50 T 14-10-2018 IPR021316 Protein of unknown function DUF2913 DA442_07465 e37328b36f84e1fca1f7f39fc206e43b 219 Pfam PF01810 LysE type translocator 26 214 8.3E-35 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DA442_07465 e37328b36f84e1fca1f7f39fc206e43b 219 PIRSF PIRSF006324 11 218 8.8E-61 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DA442_00900 5eac555d92b4b56b433affca5f993da1 279 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DA442_00900 5eac555d92b4b56b433affca5f993da1 279 Gene3D G3DSA:3.40.50.300 1 276 1.4E-87 T 14-10-2018 DA442_00900 5eac555d92b4b56b433affca5f993da1 279 SMART SM00382 29 238 3.6E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain DA442_00900 5eac555d92b4b56b433affca5f993da1 279 SUPERFAMILY SSF52540 1 251 4.35E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_00900 5eac555d92b4b56b433affca5f993da1 279 Pfam PF00005 ABC transporter 20 180 1.3E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DA442_00900 5eac555d92b4b56b433affca5f993da1 279 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 269 3.7E-6 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DA442_05325 d7ebfbcf7c950034f5668dd3663019ab 159 Pfam PF05433 Glycine zipper 2TM domain 64 101 1.5E-9 T 14-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 DA442_22210 145f55b17c674e519eed1b8d48dfb9b6 166 Pfam PF03748 Flagellar basal body-associated protein FliL 67 166 3.1E-14 T 14-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 DA442_11330 e2c7a6580d9a116d9fdddc3fa24c52d3 574 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 74 233 3.6E-11 T 14-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like DA442_04640 2d009d6785f844dd940217fdb6dfd643 206 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 39 192 1.3E-11 T 14-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like DA442_04640 2d009d6785f844dd940217fdb6dfd643 206 Gene3D G3DSA:2.50.20.10 26 206 4.0E-25 T 14-10-2018 DA442_04640 2d009d6785f844dd940217fdb6dfd643 206 SUPERFAMILY SSF89392 27 192 7.06E-20 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX DA442_02745 c54bf20c05f1777dc8faf9a122695686 143 SUPERFAMILY SSF54534 4 142 7.27E-37 T 14-10-2018 DA442_02745 c54bf20c05f1777dc8faf9a122695686 143 Gene3D G3DSA:2.40.10.330 72 128 1.0E-42 T 14-10-2018 DA442_02745 c54bf20c05f1777dc8faf9a122695686 143 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 139 2.6E-13 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DA442_02745 c54bf20c05f1777dc8faf9a122695686 143 Gene3D G3DSA:3.10.50.40 13 140 1.0E-42 T 14-10-2018 DA442_22710 cd83e7e138b46eb7fdafb920aae55fac 403 Gene3D G3DSA:3.30.470.20 108 401 3.1E-34 T 14-10-2018 DA442_22710 cd83e7e138b46eb7fdafb920aae55fac 403 SUPERFAMILY SSF56059 93 321 7.63E-29 T 14-10-2018 DA442_01025 26dfc442120fa654c24a433020cc2ab8 78 SUPERFAMILY SSF143800 2 76 7.85E-30 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01025 26dfc442120fa654c24a433020cc2ab8 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.212 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_01025 26dfc442120fa654c24a433020cc2ab8 78 Gene3D G3DSA:2.30.170.40 2 78 1.4E-32 T 14-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01025 26dfc442120fa654c24a433020cc2ab8 78 Pfam PF00830 Ribosomal L28 family 3 62 5.0E-26 T 14-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DA442_01025 26dfc442120fa654c24a433020cc2ab8 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 6.8E-27 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DA442_11325 1dba3129605b7325151ebe1da4c04ae9 192 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 29 189 3.2E-38 T 14-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component DA442_11325 1dba3129605b7325151ebe1da4c04ae9 192 SUPERFAMILY SSF159594 29 192 9.68E-29 T 14-10-2018 DA442_11325 1dba3129605b7325151ebe1da4c04ae9 192 Gene3D G3DSA:3.40.50.10610 19 192 5.0E-14 T 14-10-2018 DA442_10325 5c00154fa99e7ad1fecdeb9c356290d0 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 8.2E-14 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_09460 5c00154fa99e7ad1fecdeb9c356290d0 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 8.2E-14 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_22760 023c0d474f2f221312fa9da24c2af032 148 SUPERFAMILY SSF103247 24 146 1.44E-34 T 14-10-2018 IPR035923 TT1751-like domain superfamily DA442_22760 023c0d474f2f221312fa9da24c2af032 148 Pfam PF03625 Domain of unknown function DUF302 54 116 1.9E-20 T 14-10-2018 IPR005180 Domain of unknown function DUF302 DA442_22760 023c0d474f2f221312fa9da24c2af032 148 Gene3D G3DSA:3.30.310.70 23 145 8.4E-15 T 14-10-2018 IPR035923 TT1751-like domain superfamily DA442_12850 70c5a1bffefba3033fde0d0f122953c0 147 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 29.757 T 14-10-2018 IPR003791 Protein of unknown function UPF0178 DA442_12850 70c5a1bffefba3033fde0d0f122953c0 147 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 18 145 1.1E-47 T 14-10-2018 IPR003791 Protein of unknown function UPF0178 DA442_23470 38950305dc3d475e885c18f4784896e5 94 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 2 94 25.027 T 14-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 DA442_23470 38950305dc3d475e885c18f4784896e5 94 Gene3D G3DSA:2.60.120.10 1 94 7.5E-37 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DA442_23470 38950305dc3d475e885c18f4784896e5 94 Pfam PF06865 Protein of unknown function (DUF1255) 4 93 1.3E-33 T 14-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 DA442_23470 38950305dc3d475e885c18f4784896e5 94 SUPERFAMILY SSF51182 3 94 2.22E-33 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DA442_10350 85c634efa15633b728ba521959983833 69 Pfam PF13127 Protein of unknown function (DUF3955) 6 64 3.1E-17 T 14-10-2018 IPR025016 Protein of unknown function DUF3955 DA442_20690 42984751af2788cd08bdbb7ea1231378 135 SUPERFAMILY SSF47413 2 61 7.13E-6 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DA442_20690 42984751af2788cd08bdbb7ea1231378 135 Gene3D G3DSA:1.10.260.40 2 66 7.3E-6 T 14-10-2018 DA442_06080 b983731c47f277beaf533af29f9a6425 476 Pfam PF00209 Sodium:neurotransmitter symporter family 10 120 1.7E-21 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DA442_06080 b983731c47f277beaf533af29f9a6425 476 Pfam PF00209 Sodium:neurotransmitter symporter family 150 447 5.9E-33 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DA442_06080 b983731c47f277beaf533af29f9a6425 476 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 18 39 3.8E-12 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DA442_06080 b983731c47f277beaf533af29f9a6425 476 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 315 335 3.8E-12 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DA442_06080 b983731c47f277beaf533af29f9a6425 476 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 91 117 3.8E-12 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DA442_06080 b983731c47f277beaf533af29f9a6425 476 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 47 66 3.8E-12 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DA442_06080 b983731c47f277beaf533af29f9a6425 476 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 34 48 - T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DA442_06080 b983731c47f277beaf533af29f9a6425 476 SUPERFAMILY SSF161070 10 457 3.01E-129 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 DA442_07365 75030095dcfb5669e22ac4b75fef7570 446 Gene3D G3DSA:1.20.1740.10 6 445 9.1E-80 T 14-10-2018 DA442_07365 75030095dcfb5669e22ac4b75fef7570 446 PIRSF PIRSF006060 3 445 1.2E-74 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DA442_07365 75030095dcfb5669e22ac4b75fef7570 446 Pfam PF13520 Amino acid permease 12 411 2.6E-58 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DA442_10205 cb987c5c9ae6cb44b601ba844d2cd0b8 29 Pfam PF11665 Protein of unknown function (DUF3265) 2 29 1.1E-13 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_12095 1659556be09b1df1311e55d41522c9f4 134 PIRSF PIRSF016789 8 129 1.6E-41 T 14-10-2018 IPR007401 Protein of unknown function DUF454 DA442_12095 1659556be09b1df1311e55d41522c9f4 134 Pfam PF04304 Protein of unknown function (DUF454) 9 122 8.1E-38 T 14-10-2018 IPR007401 Protein of unknown function DUF454 DA442_21460 417f7980f8f5eb83c9148e8e5be1e39b 437 Gene3D G3DSA:2.40.160.20 270 437 5.7E-6 T 14-10-2018 DA442_21460 417f7980f8f5eb83c9148e8e5be1e39b 437 SUPERFAMILY SSF56925 316 434 7.59E-7 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DA442_21460 417f7980f8f5eb83c9148e8e5be1e39b 437 SUPERFAMILY SSF56935 104 338 3.97E-5 T 14-10-2018 DA442_21460 417f7980f8f5eb83c9148e8e5be1e39b 437 Pfam PF10082 Putative beta-barrel porin 2 70 432 2.4E-30 T 14-10-2018 IPR018759 Putative beta-barrel porin 2 DA442_18465 88b837225f281c4810eae186b953553f 147 Pfam PF01478 Type IV leader peptidase family 13 108 4.5E-8 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 DA442_23380 40636fd19ec4528110c55c0548118261 83 Pfam PF11280 Protein of unknown function (DUF3081) 5 81 2.1E-29 T 14-10-2018 IPR021432 Protein of unknown function DUF3081 DA442_18855 d2e2878cfd72ded86cf9287a311e7877 358 Pfam PF01212 Beta-eliminating lyase 19 293 4.3E-39 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 DA442_18855 d2e2878cfd72ded86cf9287a311e7877 358 Gene3D G3DSA:3.40.640.10 2 253 1.6E-68 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DA442_18855 d2e2878cfd72ded86cf9287a311e7877 358 Gene3D G3DSA:3.90.1150.10 254 356 1.1E-8 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DA442_18855 d2e2878cfd72ded86cf9287a311e7877 358 SUPERFAMILY SSF53383 23 334 4.57E-73 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DA442_10135 e92eadd216ef0ad6bf90a0db914757cc 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 3.0E-15 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_23130 f796349abad70108e09f09db0f4c2d50 236 Gene3D G3DSA:3.40.630.10 1 236 4.1E-59 T 14-10-2018 DA442_23130 f796349abad70108e09f09db0f4c2d50 236 Pfam PF00246 Zinc carboxypeptidase 42 156 1.5E-9 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 DA442_23130 f796349abad70108e09f09db0f4c2d50 236 SUPERFAMILY SSF53187 13 213 1.42E-28 T 14-10-2018 DA442_08685 3e624fc2d75ff1c82c8794e910b5cd2b 94 Pfam PF07216 LcrG protein 1 94 1.6E-42 T 14-10-2018 IPR009863 Type III secretion protein, LcrG DA442_08685 3e624fc2d75ff1c82c8794e910b5cd2b 94 TIGRFAM TIGR02573 LcrG_PcrG: type III secretion protein LcrG 2 94 7.0E-43 T 14-10-2018 IPR009863 Type III secretion protein, LcrG DA442_08685 3e624fc2d75ff1c82c8794e910b5cd2b 94 ProDom PD020116 PLASMID ACRG TYPE III G SECRETION REGULATOR LCRG LOCUS RESPONSE 2 94 3.0E-30 T 14-10-2018 IPR009863 Type III secretion protein, LcrG DA442_07300 ef58067e37cc7915e49224e4ae74a3eb 419 Pfam PF13265 Protein of unknown function (DUF4056) 59 326 2.1E-115 T 14-10-2018 IPR025130 Protein of unknown function DUF4056 DA442_11655 3f97c8832b3f74a36d2f213d785d5f16 150 Pfam PF04217 Protein of unknown function, DUF412 8 146 3.7E-58 T 14-10-2018 IPR007334 Uncharacterised protein family UPF0208 DA442_11655 3f97c8832b3f74a36d2f213d785d5f16 150 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 5 150 36.052 T 14-10-2018 IPR007334 Uncharacterised protein family UPF0208 DA442_19250 497ff5442df017f5ccbc4033c09a692a 200 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 25 183 2.5E-22 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain DA442_19250 497ff5442df017f5ccbc4033c09a692a 200 SUPERFAMILY SSF52266 22 199 4.58E-51 T 14-10-2018 DA442_19250 497ff5442df017f5ccbc4033c09a692a 200 Gene3D G3DSA:3.40.50.1110 20 200 3.7E-64 T 14-10-2018 IPR036514 SGNH hydrolase superfamily DA442_19250 497ff5442df017f5ccbc4033c09a692a 200 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 23 33 - T 14-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 DA442_05495 9e7de9234b8edf03f2690dd794aacc6f 100 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 20 97 4.7E-30 T 14-10-2018 IPR011846 Cyd operon protein YbgE DA442_05495 9e7de9234b8edf03f2690dd794aacc6f 100 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 8 100 2.0E-41 T 14-10-2018 IPR011846 Cyd operon protein YbgE DA442_25540 5e9ad28f66afd80050981ec02fd06437 361 Gene3D G3DSA:2.40.160.60 22 361 8.7E-61 T 14-10-2018 DA442_25540 5e9ad28f66afd80050981ec02fd06437 361 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 14 221 3.0E-27 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) DA442_25540 5e9ad28f66afd80050981ec02fd06437 361 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 224 338 8.1E-15 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) DA442_25540 5e9ad28f66afd80050981ec02fd06437 361 SUPERFAMILY SSF56935 22 337 8.61E-58 T 14-10-2018 DA442_24515 ca963d0b0f12d38ddb3a42ab41cfe6f7 172 ProSitePatterns PS00893 Nudix box signature. 52 73 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DA442_24515 ca963d0b0f12d38ddb3a42ab41cfe6f7 172 Pfam PF00293 NUDIX domain 23 145 2.1E-16 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DA442_24515 ca963d0b0f12d38ddb3a42ab41cfe6f7 172 SUPERFAMILY SSF55811 23 142 2.57E-21 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DA442_24515 ca963d0b0f12d38ddb3a42ab41cfe6f7 172 Gene3D G3DSA:3.90.79.10 14 151 3.6E-26 T 14-10-2018 DA442_01620 33399694f9042b5e20525a02331b700d 205 Gene3D G3DSA:3.40.50.300 9 205 3.2E-78 T 14-10-2018 DA442_01620 33399694f9042b5e20525a02331b700d 205 SUPERFAMILY SSF52540 25 200 5.31E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_01620 33399694f9042b5e20525a02331b700d 205 Pfam PF01583 Adenylylsulphate kinase 31 185 2.3E-70 T 14-10-2018 DA442_01620 33399694f9042b5e20525a02331b700d 205 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 14 197 6.7E-81 T 14-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 DA442_01620 33399694f9042b5e20525a02331b700d 205 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 30 202 38.558 T 14-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 DA442_03180 3af76f8b9a10a2d2d2b392973d643b2e 293 SUPERFAMILY SSF55186 121 272 2.54E-14 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 DA442_12985 d5db7c624566661e456c210d38869080 189 Pfam PF03923 Uncharacterized lipoprotein 28 186 4.7E-52 T 14-10-2018 IPR005619 Uncharacterised protein family, YajG DA442_25655 78c884af415145aae3fb5fbdde71e705 177 Pfam PF01161 Phosphatidylethanolamine-binding protein 41 175 1.3E-34 T 14-10-2018 IPR008914 Phosphatidylethanolamine-binding protein DA442_25655 78c884af415145aae3fb5fbdde71e705 177 Gene3D G3DSA:3.90.280.10 12 177 7.5E-51 T 14-10-2018 IPR036610 PEBP-like superfamily DA442_25655 78c884af415145aae3fb5fbdde71e705 177 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 40 175 7.2E-38 T 14-10-2018 IPR005247 YbhB/YbcL DA442_25655 78c884af415145aae3fb5fbdde71e705 177 SUPERFAMILY SSF49777 22 177 1.44E-46 T 14-10-2018 IPR036610 PEBP-like superfamily DA442_20340 64b2990f7abfe373e0583962f8205053 290 Pfam PF04116 Fatty acid hydroxylase superfamily 97 231 2.9E-31 T 14-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 DA442_07220 9f5f2d6604adbde5dfde7714b6d756d1 347 Gene3D G3DSA:2.60.40.10 33 116 7.7E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold DA442_07220 9f5f2d6604adbde5dfde7714b6d756d1 347 SUPERFAMILY SSF48726 31 112 2.47E-5 T 14-10-2018 IPR036179 Immunoglobulin-like domain superfamily DA442_07220 9f5f2d6604adbde5dfde7714b6d756d1 347 Gene3D G3DSA:2.60.40.10 120 209 7.5E-5 T 14-10-2018 IPR013783 Immunoglobulin-like fold DA442_25090 92ef9c572851e1985be3ce2930b392d8 278 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 7 276 66.127 T 14-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein DA442_25090 92ef9c572851e1985be3ce2930b392d8 278 Pfam PF03618 Kinase/pyrophosphorylase 10 267 4.9E-73 T 14-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 DA442_02245 7e5c3987f56af610e4bf6811b6a36546 367 Hamap MF_01919 Cell division protein ZapE [zapE]. 1 367 52.486 T 14-10-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 DA442_02245 7e5c3987f56af610e4bf6811b6a36546 367 SUPERFAMILY SSF52540 62 187 4.41E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_02245 7e5c3987f56af610e4bf6811b6a36546 367 Pfam PF03969 AFG1-like ATPase 1 364 7.5E-151 T 14-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 DA442_02245 7e5c3987f56af610e4bf6811b6a36546 367 Gene3D G3DSA:3.40.50.300 17 191 1.1E-21 T 14-10-2018 DA442_15690 4cf93ac04495568eca1b69696611cc25 179 Pfam PF10400 Virulence activator alpha C-term 92 176 6.0E-15 T 14-10-2018 IPR018309 Transcription regulator PadR, C-terminal DA442_15690 4cf93ac04495568eca1b69696611cc25 179 Gene3D G3DSA:1.10.10.10 1 89 6.4E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DA442_15690 4cf93ac04495568eca1b69696611cc25 179 SUPERFAMILY SSF46785 3 176 1.04E-43 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_15690 4cf93ac04495568eca1b69696611cc25 179 Pfam PF03551 Transcriptional regulator PadR-like family 7 80 1.1E-15 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal DA442_07575 d88e0f74a4077c9b3b345bbb47a407ce 491 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 18 490 4.9E-218 T 14-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath DA442_07575 d88e0f74a4077c9b3b345bbb47a407ce 491 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 68 490 3.4E-179 T 14-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath DA442_10840 5f86493cc00cfeef3a8e6b6e297fafa8 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 158 180 1.1E-65 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DA442_10840 5f86493cc00cfeef3a8e6b6e297fafa8 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 293 309 1.1E-65 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DA442_10840 5f86493cc00cfeef3a8e6b6e297fafa8 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 131 148 1.1E-65 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DA442_10840 5f86493cc00cfeef3a8e6b6e297fafa8 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 209 235 1.1E-65 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DA442_10840 5f86493cc00cfeef3a8e6b6e297fafa8 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 243 263 1.1E-65 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DA442_10840 5f86493cc00cfeef3a8e6b6e297fafa8 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 273 293 1.1E-65 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DA442_10840 5f86493cc00cfeef3a8e6b6e297fafa8 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 309 328 1.1E-65 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DA442_10840 5f86493cc00cfeef3a8e6b6e297fafa8 635 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 1.1E-65 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 DA442_10840 5f86493cc00cfeef3a8e6b6e297fafa8 635 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 314 618 9.5E-58 T 14-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal DA442_10840 5f86493cc00cfeef3a8e6b6e297fafa8 635 Pfam PF01578 Cytochrome C assembly protein 89 294 2.1E-40 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 DA442_10395 5c161ac6b42a0dfa2608c3da1167a865 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 5.6E-13 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_06670 6466821c88efdd7335f67e9fc26412a7 124 Hamap MF_01144 UPF0299 membrane protein YohJ [yohJ]. 5 124 21.777 T 14-10-2018 IPR022957 Uncharacterised protein family UPF0299 DA442_06670 6466821c88efdd7335f67e9fc26412a7 124 Pfam PF03788 LrgA family 25 115 5.9E-25 T 14-10-2018 IPR005538 LrgA/CidA family GO:0016021 DA442_09160 c9d844c45c9ae01352737e0c7dad5de9 375 SUPERFAMILY SSF56935 39 375 3.33E-26 T 14-10-2018 DA442_09160 c9d844c45c9ae01352737e0c7dad5de9 375 Gene3D G3DSA:2.40.160.10 120 375 1.3E-6 T 14-10-2018 IPR023614 Porin domain superfamily DA442_21180 dc7afe694755167c7409875180bcb32a 205 SUPERFAMILY SSF53474 3 188 6.39E-15 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_10195 83629de09f5233bf583bbe559374e69c 43 Pfam PF11665 Protein of unknown function (DUF3265) 16 43 2.7E-14 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_06055 09242ba67155af8f6ebfeaa7bb0ffc48 188 SUPERFAMILY SSF48150 5 186 8.79E-73 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 DA442_06055 09242ba67155af8f6ebfeaa7bb0ffc48 188 Gene3D G3DSA:1.10.340.30 4 188 4.0E-75 T 14-10-2018 DA442_06055 09242ba67155af8f6ebfeaa7bb0ffc48 188 Pfam PF03352 Methyladenine glycosylase 9 184 7.9E-72 T 14-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 DA442_12435 211598dcd749137bf2c7dd9ecd5f0d7d 266 PRINTS PR01003 Flagellar assembly protein FliH signature 217 233 6.7E-5 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 DA442_12435 211598dcd749137bf2c7dd9ecd5f0d7d 266 PRINTS PR01003 Flagellar assembly protein FliH signature 81 103 6.7E-5 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 DA442_12435 211598dcd749137bf2c7dd9ecd5f0d7d 266 PRINTS PR01003 Flagellar assembly protein FliH signature 104 122 6.7E-5 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 DA442_12435 211598dcd749137bf2c7dd9ecd5f0d7d 266 Pfam PF02108 Flagellar assembly protein FliH 125 251 5.7E-36 T 14-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE DA442_06150 ad43b7e7aecdda80e9ef8cc55b5264fa 256 Pfam PF02754 Cysteine-rich domain 121 203 4.7E-8 T 14-10-2018 IPR004017 Cysteine-rich domain DA442_06150 ad43b7e7aecdda80e9ef8cc55b5264fa 256 Pfam PF02754 Cysteine-rich domain 6 85 1.7E-6 T 14-10-2018 IPR004017 Cysteine-rich domain DA442_12945 481204e63331af68281f8b1c4f02f019 198 PIRSF PIRSF006102 1 198 4.9E-66 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 DA442_12945 481204e63331af68281f8b1c4f02f019 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 197 5.6E-108 T 14-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 DA442_12945 481204e63331af68281f8b1c4f02f019 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 1.4E-59 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 DA442_12945 481204e63331af68281f8b1c4f02f019 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 29.927 T 14-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 DA442_10500 39e04feb2b7219da47c0c9e925dca8ca 137 Pfam PF06271 RDD family 15 129 5.1E-11 T 14-10-2018 IPR010432 RDD DA442_18310 275a4273e13cd206a9f6c7e1abf11369 192 Pfam PF14316 Domain of unknown function (DUF4381) 15 164 1.4E-25 T 14-10-2018 IPR025489 Protein of unknown function (DUF4381 DA442_06355 b24178de132d51ccf8d6825cf82284aa 301 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 134 299 4.0E-79 T 14-10-2018 IPR005642 Lysine exporter LysO DA442_06355 b24178de132d51ccf8d6825cf82284aa 301 Pfam PF03956 Lysine exporter LysO 112 297 3.9E-52 T 14-10-2018 IPR005642 Lysine exporter LysO DA442_02570 a1a792c641e0afd3a0884054ee2d94ea 189 Gene3D G3DSA:1.20.120.520 4 159 2.9E-17 T 14-10-2018 DA442_02570 a1a792c641e0afd3a0884054ee2d94ea 189 Pfam PF01814 Hemerythrin HHE cation binding domain 8 141 1.7E-15 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 DA442_11445 1d8c6f1eab984689b90c82099e36a25c 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 257 277 2.8E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DA442_11445 1d8c6f1eab984689b90c82099e36a25c 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 429 449 2.8E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DA442_11445 1d8c6f1eab984689b90c82099e36a25c 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 11 32 2.8E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DA442_11445 1d8c6f1eab984689b90c82099e36a25c 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 84 110 2.8E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DA442_11445 1d8c6f1eab984689b90c82099e36a25c 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 40 59 2.8E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DA442_11445 1d8c6f1eab984689b90c82099e36a25c 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 388 408 2.8E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DA442_11445 1d8c6f1eab984689b90c82099e36a25c 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 311 330 2.8E-36 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DA442_11445 1d8c6f1eab984689b90c82099e36a25c 488 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 27 41 - T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DA442_11445 1d8c6f1eab984689b90c82099e36a25c 488 SUPERFAMILY SSF161070 3 475 4.97E-148 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 DA442_11445 1d8c6f1eab984689b90c82099e36a25c 488 Pfam PF00209 Sodium:neurotransmitter symporter family 123 462 1.2E-76 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DA442_11445 1d8c6f1eab984689b90c82099e36a25c 488 Pfam PF00209 Sodium:neurotransmitter symporter family 3 121 2.0E-39 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DA442_11850 13f0bbe4f83fe25cbccb35458d79b77a 167 Pfam PF11993 Ribosomal S4P (gammaproteobacterial) 1 164 9.8E-64 T 14-10-2018 IPR021879 Ribosomal S4P (gammaproteobacterial) DA442_01005 fedd8f43beae75db1a5d5a963edf7e6d 399 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 186 371 1.1E-75 T 14-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 DA442_01005 fedd8f43beae75db1a5d5a963edf7e6d 399 SUPERFAMILY SSF52507 1 182 1.7E-60 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 DA442_01005 fedd8f43beae75db1a5d5a963edf7e6d 399 Gene3D G3DSA:3.40.50.1950 1 186 1.8E-55 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 DA442_01005 fedd8f43beae75db1a5d5a963edf7e6d 399 SUPERFAMILY SSF102645 184 398 2.62E-78 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 DA442_01005 fedd8f43beae75db1a5d5a963edf7e6d 399 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 395 6.5E-152 T 14-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 DA442_01005 fedd8f43beae75db1a5d5a963edf7e6d 399 Pfam PF02441 Flavoprotein 7 179 5.5E-43 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 DA442_01005 fedd8f43beae75db1a5d5a963edf7e6d 399 Gene3D G3DSA:3.40.50.10300 187 399 9.9E-83 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 DA442_02835 a600e6b4c1ea54bd296c2341d60ded9a 182 Pfam PF01931 Protein of unknown function DUF84 14 172 4.5E-58 T 14-10-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 DA442_02835 a600e6b4c1ea54bd296c2341d60ded9a 182 Gene3D G3DSA:3.90.950.10 2 181 3.2E-69 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DA442_02835 a600e6b4c1ea54bd296c2341d60ded9a 182 Hamap MF_00648 Non-canonical purine NTP phosphatase. 9 178 29.894 T 14-10-2018 IPR002786 Non-canonical purine NTP phosphatase DA442_02835 a600e6b4c1ea54bd296c2341d60ded9a 182 SUPERFAMILY SSF52972 9 178 2.09E-60 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DA442_02835 a600e6b4c1ea54bd296c2341d60ded9a 182 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 13 176 8.7E-46 T 14-10-2018 IPR002786 Non-canonical purine NTP phosphatase DA442_04620 6e05e6db8b7d271c640d4ca0ec29468e 154 Pfam PF07977 FabA-like domain 11 132 1.9E-5 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DA442_04620 6e05e6db8b7d271c640d4ca0ec29468e 154 SUPERFAMILY SSF54637 4 143 2.68E-29 T 14-10-2018 IPR029069 HotDog domain superfamily DA442_04620 6e05e6db8b7d271c640d4ca0ec29468e 154 Gene3D G3DSA:3.10.129.10 4 141 4.2E-23 T 14-10-2018 DA442_04620 6e05e6db8b7d271c640d4ca0ec29468e 154 PIRSF PIRSF020565 1 154 1.2E-66 T 14-10-2018 IPR016776 3-hydroxylacyl-(acyl carrier protein) dehydratase, predicted DA442_20520 8daee086de79487958b21d7c1cc8e7f5 108 Pfam PF08895 Domain of unknown function (DUF1840) 1 105 3.4E-33 T 14-10-2018 IPR014991 Protein of unknown function DUF1840 DA442_17495 fdaa8e246f90350ff69490fd047ef24b 129 Pfam PF03899 ATP synthase I chain 15 111 3.3E-21 T 14-10-2018 IPR005598 ATP synthase protein I DA442_10105 dea94b4169b1654cbd82da1b3971ad2c 134 SUPERFAMILY SSF159888 5 125 1.23E-9 T 14-10-2018 DA442_10105 dea94b4169b1654cbd82da1b3971ad2c 134 Pfam PF08818 Domain of unknown function (DU1801) 19 120 2.1E-9 T 14-10-2018 IPR014922 Domain of unknown function DUF1801 DA442_00665 4a8cf08d817675a862fcc3a966f69db4 305 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 164 297 1.4E-45 T 14-10-2018 IPR012660 Thioesterase, putative DA442_00665 4a8cf08d817675a862fcc3a966f69db4 305 SUPERFAMILY SSF54637 154 296 2.95E-40 T 14-10-2018 IPR029069 HotDog domain superfamily DA442_00665 4a8cf08d817675a862fcc3a966f69db4 305 Pfam PF00583 Acetyltransferase (GNAT) family 35 122 9.7E-11 T 14-10-2018 IPR000182 GNAT domain DA442_00665 4a8cf08d817675a862fcc3a966f69db4 305 Gene3D G3DSA:3.40.630.30 3 145 7.6E-27 T 14-10-2018 DA442_00665 4a8cf08d817675a862fcc3a966f69db4 305 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 157 296 1.0E-52 T 14-10-2018 IPR012660 Thioesterase, putative DA442_00665 4a8cf08d817675a862fcc3a966f69db4 305 SUPERFAMILY SSF55729 2 157 8.68E-30 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_00665 4a8cf08d817675a862fcc3a966f69db4 305 Gene3D G3DSA:3.10.129.10 147 298 5.6E-48 T 14-10-2018 DA442_07270 4ea946f462601c33cb84c3483ffc8ca2 189 Gene3D G3DSA:3.40.630.30 2 187 6.4E-39 T 14-10-2018 DA442_07270 4ea946f462601c33cb84c3483ffc8ca2 189 Pfam PF13302 Acetyltransferase (GNAT) domain 8 147 2.5E-17 T 14-10-2018 IPR000182 GNAT domain DA442_07270 4ea946f462601c33cb84c3483ffc8ca2 189 SUPERFAMILY SSF55729 2 171 1.37E-35 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_10055 716e266eeb1963ca62c8fd23abc85026 42 Pfam PF11665 Protein of unknown function (DUF3265) 15 42 3.1E-11 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_14030 b430ca90142eb20b1b9d575ec3878c06 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 325 1.4E-38 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DA442_14030 b430ca90142eb20b1b9d575ec3878c06 328 Gene3D G3DSA:1.10.3720.10 87 327 1.3E-18 T 14-10-2018 IPR035906 MetI-like superfamily DA442_14030 b430ca90142eb20b1b9d575ec3878c06 328 SUPERFAMILY SSF161098 93 324 2.4E-15 T 14-10-2018 IPR035906 MetI-like superfamily DA442_25850 4ca13345e035c06f57969e3f2617b152 140 SUPERFAMILY SSF55729 11 137 4.22E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_25850 4ca13345e035c06f57969e3f2617b152 140 Pfam PF00583 Acetyltransferase (GNAT) family 35 115 3.0E-12 T 14-10-2018 IPR000182 GNAT domain DA442_25850 4ca13345e035c06f57969e3f2617b152 140 Gene3D G3DSA:3.40.630.30 35 138 3.7E-25 T 14-10-2018 DA442_06780 06d27412c7107e7d8fa74e3c4bdc1c43 269 Pfam PF04991 LicD family 24 242 6.9E-53 T 14-10-2018 IPR007074 LicD family DA442_24110 76d3c9aa4459653aff4e34610cb247f2 112 Pfam PF04320 Protein with unknown function (DUF469) 11 111 7.5E-33 T 14-10-2018 IPR007416 Protein of unknown function DUF469 DA442_11880 495caa543dc916f9b0bab68867f1e808 477 Pfam PF03553 Na+/H+ antiporter family 161 453 3.0E-66 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 DA442_11880 495caa543dc916f9b0bab68867f1e808 477 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 7 457 5.0E-163 T 14-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 DA442_02190 21967f2befb6d9c7bcfd386a4e7f4f87 454 Gene3D G3DSA:1.20.1600.10 23 454 5.1E-118 T 14-10-2018 DA442_02190 21967f2befb6d9c7bcfd386a4e7f4f87 454 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 23 449 4.0E-106 T 14-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 DA442_02190 21967f2befb6d9c7bcfd386a4e7f4f87 454 Pfam PF02321 Outer membrane efflux protein 240 436 1.5E-32 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DA442_02190 21967f2befb6d9c7bcfd386a4e7f4f87 454 Pfam PF02321 Outer membrane efflux protein 25 216 2.5E-28 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 DA442_02190 21967f2befb6d9c7bcfd386a4e7f4f87 454 SUPERFAMILY SSF56954 1 442 3.4E-89 T 14-10-2018 DA442_23045 76f98ecb4d8c3d66b6c54f2bafe454ee 189 SUPERFAMILY SSF55729 13 187 7.34E-39 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_23045 76f98ecb4d8c3d66b6c54f2bafe454ee 189 Gene3D G3DSA:3.40.630.30 5 188 6.1E-41 T 14-10-2018 DA442_23045 76f98ecb4d8c3d66b6c54f2bafe454ee 189 Pfam PF13302 Acetyltransferase (GNAT) domain 18 162 4.5E-22 T 14-10-2018 IPR000182 GNAT domain DA442_20245 8b6139e2947b37516a2a1f2c9b640d71 243 Gene3D G3DSA:3.40.50.1580 1 243 1.7E-74 T 14-10-2018 DA442_20245 8b6139e2947b37516a2a1f2c9b640d71 243 Pfam PF01048 Phosphorylase superfamily 17 199 6.4E-34 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 DA442_20245 8b6139e2947b37516a2a1f2c9b640d71 243 SUPERFAMILY SSF53167 4 220 7.99E-67 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 DA442_24435 81eca2a98cf9dd167697c4d983e7c5b1 183 Gene3D G3DSA:2.40.160.20 23 183 5.7E-18 T 14-10-2018 DA442_24435 81eca2a98cf9dd167697c4d983e7c5b1 183 SUPERFAMILY SSF56925 21 183 8.89E-19 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DA442_24435 81eca2a98cf9dd167697c4d983e7c5b1 183 Pfam PF13505 Outer membrane protein beta-barrel domain 7 183 2.6E-15 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel DA442_25155 8496e4a92d0597ebf10356458fb364e1 374 SUPERFAMILY SSF51395 2 370 6.11E-126 T 14-10-2018 DA442_25155 8496e4a92d0597ebf10356458fb364e1 374 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 344 9.6E-97 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 DA442_25155 8496e4a92d0597ebf10356458fb364e1 374 Gene3D G3DSA:3.20.20.70 5 373 6.2E-140 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_17775 6323e71b928aedff563903843a03d6df 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 208 227 4.9E-9 T 14-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 DA442_17775 6323e71b928aedff563903843a03d6df 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 72 94 4.9E-9 T 14-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 DA442_17775 6323e71b928aedff563903843a03d6df 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 176 194 4.9E-9 T 14-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 DA442_17775 6323e71b928aedff563903843a03d6df 264 SUPERFAMILY SSF56534 3 235 4.06E-97 T 14-10-2018 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily DA442_17775 6323e71b928aedff563903843a03d6df 264 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 115 126 - T 14-10-2018 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 DA442_17775 6323e71b928aedff563903843a03d6df 264 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 13 229 7.1E-46 T 14-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 DA442_17775 6323e71b928aedff563903843a03d6df 264 Gene3D G3DSA:1.10.800.10 1 264 1.0E-95 T 14-10-2018 IPR036951 Aromatic amino acid hydroxylase superfamily GO:0004497|GO:0005506|GO:0009072|GO:0055114 DA442_17775 6323e71b928aedff563903843a03d6df 264 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 14 239 4.3E-96 T 14-10-2018 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|KEGG: 00790+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158 DA442_13750 b2883461232b78c213948dbd8a1a0fc4 295 Pfam PF13280 WYL domain 122 210 1.2E-13 T 14-10-2018 IPR026881 WYL domain DA442_13750 b2883461232b78c213948dbd8a1a0fc4 295 PIRSF PIRSF015558 2 290 1.5E-119 T 14-10-2018 IPR016634 WYL domain protein, s026 type DA442_23100 35eef0e238b5bc6b4cb6d61eb8b75000 227 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 62 168 2.5E-12 T 14-10-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted DA442_23100 35eef0e238b5bc6b4cb6d61eb8b75000 227 Gene3D G3DSA:3.10.620.30 23 213 6.7E-71 T 14-10-2018 DA442_13395 fe2f38b198042d9f57e486faa01d9a5a 201 Pfam PF10144 Bacterial virulence factor haemolysin 12 151 7.3E-38 T 14-10-2018 IPR019305 Uncharacterised protein family Smp DA442_15500 c25cd1a1992cc58c76109638cfc90b2d 219 Pfam PF13505 Outer membrane protein beta-barrel domain 9 219 3.9E-8 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel DA442_15500 c25cd1a1992cc58c76109638cfc90b2d 219 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 5 219 1.4E-54 T 14-10-2018 IPR026387 Outer membrane protein DA442_25315 213199968cbec651970d26f66788b260 199 Gene3D G3DSA:3.80.10.10 22 196 1.1E-6 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily DA442_16230 feefc10a1994ed437bd0b211ebfc14f2 170 Pfam PF07813 LTXXQ motif family protein 40 149 5.2E-25 T 14-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 DA442_16230 feefc10a1994ed437bd0b211ebfc14f2 170 Gene3D G3DSA:1.20.120.1490 37 154 3.6E-27 T 14-10-2018 DA442_16230 feefc10a1994ed437bd0b211ebfc14f2 170 PIRSF PIRSF034445 2 163 5.3E-20 T 14-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 DA442_10610 234b04b628fd31dafe49a8447c389aa1 458 PIRSF PIRSF019381 1 458 9.0E-202 T 14-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein DA442_10610 234b04b628fd31dafe49a8447c389aa1 458 Pfam PF04317 YcjX-like family, DUF463 20 457 1.5E-189 T 14-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein DA442_22365 51aa34f0e44abbbe106b7f39a2f6e3c9 96 Gene3D G3DSA:3.30.70.100 1 89 1.1E-26 T 14-10-2018 DA442_22365 51aa34f0e44abbbe106b7f39a2f6e3c9 96 SUPERFAMILY SSF54909 1 80 2.55E-26 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel DA442_22365 51aa34f0e44abbbe106b7f39a2f6e3c9 96 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 5.0E-20 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain DA442_19055 7e15723ee2444b0d79fd9b79f231afd6 157 Pfam PF05981 CreA protein 22 144 1.3E-44 T 14-10-2018 IPR010292 Uncharacterised protein family CreA DA442_19055 7e15723ee2444b0d79fd9b79f231afd6 157 PIRSF PIRSF003174 1 155 4.9E-50 T 14-10-2018 IPR010292 Uncharacterised protein family CreA DA442_01265 08b813fead05bcbf86909d6db5ee54aa 271 Gene3D G3DSA:3.40.50.2000 13 264 7.7E-28 T 14-10-2018 DA442_01265 08b813fead05bcbf86909d6db5ee54aa 271 Pfam PF00534 Glycosyl transferases group 1 101 244 5.2E-17 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 DA442_01265 08b813fead05bcbf86909d6db5ee54aa 271 Gene3D G3DSA:3.40.50.2000 86 257 7.7E-28 T 14-10-2018 DA442_01265 08b813fead05bcbf86909d6db5ee54aa 271 SUPERFAMILY SSF53756 19 270 2.67E-35 T 14-10-2018 DA442_04195 f0639a2525b4bef14d32a4e81716c844 247 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 13 229 2.6E-40 T 14-10-2018 DA442_04195 f0639a2525b4bef14d32a4e81716c844 247 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 7 247 28.262 T 14-10-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 DA442_10185 24979326f3d609e41965fc152e4187c7 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 2.2E-16 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_07775 8910979244f9d1c98af602a9dbb48278 176 Gene3D G3DSA:3.30.420.10 1 176 2.8E-37 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DA442_07775 8910979244f9d1c98af602a9dbb48278 176 Pfam PF00929 Exonuclease 7 171 5.7E-12 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DA442_07775 8910979244f9d1c98af602a9dbb48278 176 SMART SM00479 5 176 6.9E-5 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DA442_07775 8910979244f9d1c98af602a9dbb48278 176 SUPERFAMILY SSF53098 4 175 1.1E-28 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DA442_06445 e71df806b050678167996e4108ccb53b 456 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 38 456 8.6E-109 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 DA442_06445 e71df806b050678167996e4108ccb53b 456 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 406 422 - T 14-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 DA442_06445 e71df806b050678167996e4108ccb53b 456 Pfam PF00939 Sodium:sulfate symporter transmembrane region 37 456 3.8E-56 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 DA442_05750 954203f9e8fee6c1e20c1a08284edf28 287 Hamap MF_00188 Protease HtpX [htpX]. 1 287 24.997 T 14-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 DA442_05750 954203f9e8fee6c1e20c1a08284edf28 287 Gene3D G3DSA:3.30.2010.10 68 161 1.3E-37 T 14-10-2018 DA442_05750 954203f9e8fee6c1e20c1a08284edf28 287 Pfam PF01435 Peptidase family M48 78 286 9.8E-40 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 DA442_03605 ecae929caeee3b99e347b3771861676a 258 Pfam PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) 1 256 6.9E-115 T 14-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 DA442_03605 ecae929caeee3b99e347b3771861676a 258 PIRSF PIRSF029037 1 258 3.2E-116 T 14-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 DA442_01350 8fdc6eda9d12ca1b6650a23715dc657e 112 Pfam PF11333 Protein of unknown function (DUF3135) 12 91 5.7E-35 T 14-10-2018 IPR021482 Protein of unknown function DUF3135 DA442_23680 37e8bedf494f6efcd258df89568c012f 81 Gene3D G3DSA:2.30.30.400 2 79 1.5E-15 T 14-10-2018 IPR038626 Rof-like superfamily DA442_23680 37e8bedf494f6efcd258df89568c012f 81 SUPERFAMILY SSF101744 1 80 1.73E-21 T 14-10-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 DA442_23680 37e8bedf494f6efcd258df89568c012f 81 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 1 80 2.7E-28 T 14-10-2018 IPR009778 Modulator of Rho-dependent transcription termination DA442_09900 883cedf827ef549cffbad3221eaf0cfc 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 1.6E-15 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_14675 2b7002b5537dd9c6c99177fb63ba9e48 209 Pfam PF01810 LysE type translocator 15 202 5.2E-43 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DA442_21710 c848c6b3326ec63533e0c7f674aa0313 328 SMART SM00327 90 291 5.0E-19 T 14-10-2018 IPR002035 von Willebrand factor, type A DA442_21710 c848c6b3326ec63533e0c7f674aa0313 328 Pfam PF00092 von Willebrand factor type A domain 92 284 2.2E-32 T 14-10-2018 IPR002035 von Willebrand factor, type A DA442_21710 c848c6b3326ec63533e0c7f674aa0313 328 Gene3D G3DSA:3.40.50.410 90 291 9.2E-60 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily DA442_21710 c848c6b3326ec63533e0c7f674aa0313 328 SUPERFAMILY SSF53300 88 287 2.08E-39 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily DA442_17155 18e8df19b841c70b0e66f007a6ce6d14 252 Pfam PF09836 Putative DNA-binding domain 6 93 1.7E-22 T 14-10-2018 IPR018640 Putative DNA-binding domain, bacteria DA442_09800 2647c16b1e7dc58f84be3ddea4ce4a74 38 Pfam PF11665 Protein of unknown function (DUF3265) 12 38 5.3E-14 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_22330 02f5f280014243cda82645ce5948f7ee 381 Pfam PF01594 AI-2E family transporter 24 347 1.4E-33 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like DA442_05830 5666af6e2a5c480fab03d03926c5c250 533 Pfam PF03553 Na+/H+ antiporter family 165 497 8.6E-109 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 DA442_07740 e017567762282c402e65b76c119d64b0 447 Pfam PF03616 Sodium/glutamate symporter 8 350 2.6E-13 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 DA442_13345 b1d8cdeef29bea2ab0827209c9f2eb28 162 Pfam PF01478 Type IV leader peptidase family 5 107 5.9E-17 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 DA442_13345 b1d8cdeef29bea2ab0827209c9f2eb28 162 Gene3D G3DSA:1.20.120.1220 1 147 7.5E-9 T 14-10-2018 DA442_01935 75d7c3866e0f9266cd895ed0465f77f0 146 PIRSF PIRSF028299 24 146 4.0E-31 T 14-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 DA442_01935 75d7c3866e0f9266cd895ed0465f77f0 146 Pfam PF11777 Protein of unknown function (DUF3316) 26 139 5.0E-20 T 14-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 DA442_08875 8bd36067520d9bde6fc6c38e157a15da 332 Pfam PF16806 Antiactivator protein ExsD 58 315 2.3E-97 T 14-10-2018 IPR031835 Antiactivator protein ExsD DA442_19145 0b640d0ec6a9f776a93e76f459304c42 160 Pfam PF06496 Protein of unknown function (DUF1097) 9 141 1.1E-37 T 14-10-2018 IPR009476 Protein of unknown function DUF1097 DA442_01840 420f8b048bc4cb0d72046f799a8e5d1c 260 Pfam PF04784 Protein of unknown function, DUF547 91 198 5.8E-24 T 14-10-2018 IPR006869 Domain of unknown function DUF547 DA442_17145 102826413a27fe477aaf26e67316e7da 86 Pfam PF10048 Predicted integral membrane protein (DUF2282) 33 82 2.1E-23 T 14-10-2018 IPR018740 Protein of unknown function DUF2282, integral membrane DA442_09155 79a845a11230ad37cfbd7a2ca9c5a80e 159 SUPERFAMILY SSF53850 41 155 1.41E-5 T 14-10-2018 DA442_00500 b10bf7dcbdb9e1d89d489f8d94b24c3c 211 Gene3D G3DSA:3.30.1050.10 7 118 3.1E-6 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily DA442_00500 b10bf7dcbdb9e1d89d489f8d94b24c3c 211 Pfam PF02036 SCP-2 sterol transfer family 15 111 2.1E-23 T 14-10-2018 IPR003033 SCP2 sterol-binding domain DA442_00500 b10bf7dcbdb9e1d89d489f8d94b24c3c 211 SUPERFAMILY SSF55718 15 117 3.53E-11 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily DA442_13445 96229fa475f19f395b76c9e719f08ad6 83 SUPERFAMILY SSF47413 11 71 4.5E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DA442_13445 96229fa475f19f395b76c9e719f08ad6 83 Pfam PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 11 75 1.1E-26 T 14-10-2018 IPR031856 Putative bacterial antitoxin YdaS DA442_13445 96229fa475f19f395b76c9e719f08ad6 83 Gene3D G3DSA:1.10.260.40 9 83 1.7E-25 T 14-10-2018 DA442_09925 a012930782bd55aa1226469ec63b4aea 103 SUPERFAMILY SSF54909 1 69 1.3E-6 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel DA442_19435 8ebb45e269e3d32cc8b6cc449f4227d8 52 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 49 2.4E-25 T 14-10-2018 IPR005371 Uncharacterised protein family UPF0181 DA442_19435 8ebb45e269e3d32cc8b6cc449f4227d8 52 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 48 2.0E-20 T 14-10-2018 IPR005371 Uncharacterised protein family UPF0181 DA442_19435 8ebb45e269e3d32cc8b6cc449f4227d8 52 Hamap MF_00507 UPF0181 protein YoaH [yoaH]. 1 52 17.066 T 14-10-2018 IPR005371 Uncharacterised protein family UPF0181 DA442_05550 0f1766d86990317ff3b479ebd6cf6b3d 189 Pfam PF06693 Protein of unknown function (DUF1190) 41 184 2.5E-26 T 14-10-2018 IPR009576 Biofilm formation YgiB DA442_10040 11b3138ca85d3706bb911bb44986a326 403 Pfam PF12358 Protein of unknown function (DUF3644) 126 188 1.0E-8 T 14-10-2018 IPR022104 Protein of unknown function DUF3644 DA442_04050 bc3a8416e282c0056a40de3d69707249 143 Pfam PF02169 LPP20 lipoprotein 20 118 1.2E-8 T 14-10-2018 IPR024952 Lipoprotein LPP20-like DA442_04050 bc3a8416e282c0056a40de3d69707249 143 PIRSF PIRSF028687 1 143 6.2E-58 T 14-10-2018 IPR007293 Flagellar protein FlgP DA442_13320 02ff825817d6e6faca5b2826f685d3c8 431 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 27 69 4.0E-9 T 14-10-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal DA442_13675 38cb7c327edada08ff4a334d8307fd9b 96 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 3 83 2.3E-30 T 14-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 DA442_13675 38cb7c327edada08ff4a334d8307fd9b 96 Gene3D G3DSA:1.10.260.40 1 95 5.5E-29 T 14-10-2018 DA442_13675 38cb7c327edada08ff4a334d8307fd9b 96 Pfam PF01381 Helix-turn-helix 20 63 1.2E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DA442_13675 38cb7c327edada08ff4a334d8307fd9b 96 SUPERFAMILY SSF47413 8 86 4.69E-21 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DA442_13675 38cb7c327edada08ff4a334d8307fd9b 96 SMART SM00530 12 68 7.9E-4 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DA442_05650 811c702fa4b3d3b65c67cfc33c0bb23e 442 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 181 402 5.9E-10 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase DA442_05650 811c702fa4b3d3b65c67cfc33c0bb23e 442 SUPERFAMILY SSF56219 175 440 1.83E-64 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DA442_05650 811c702fa4b3d3b65c67cfc33c0bb23e 442 Gene3D G3DSA:3.60.10.10 170 441 2.2E-64 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DA442_11340 fc27fa0d815810557040b821a9f03279 249 Gene3D G3DSA:3.90.550.10 2 240 2.1E-36 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DA442_11340 fc27fa0d815810557040b821a9f03279 249 SUPERFAMILY SSF53448 1 232 6.65E-42 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DA442_11340 fc27fa0d815810557040b821a9f03279 249 Pfam PF00535 Glycosyl transferase family 2 6 116 3.3E-25 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DA442_10540 54beb745c7c664c9df78e223edf95dbd 47 Pfam PF11665 Protein of unknown function (DUF3265) 20 47 3.1E-13 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_19970 e73794c5dbeb512e6a109b5a460fe184 96 Pfam PF05488 PAAR motif 18 85 1.0E-23 T 14-10-2018 IPR008727 PAAR motif DA442_19970 e73794c5dbeb512e6a109b5a460fe184 96 Gene3D G3DSA:2.60.200.60 1 53 2.0E-11 T 14-10-2018 DA442_19970 e73794c5dbeb512e6a109b5a460fe184 96 Gene3D G3DSA:2.60.200.60 54 95 1.7E-11 T 14-10-2018 DA442_04545 d39d986b0aae81ff3bc0db4f698ff637 284 Gene3D G3DSA:3.40.50.1820 1 278 6.0E-48 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_04545 d39d986b0aae81ff3bc0db4f698ff637 284 SUPERFAMILY SSF53474 2 282 8.98E-45 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DA442_04545 d39d986b0aae81ff3bc0db4f698ff637 284 Pfam PF00561 alpha/beta hydrolase fold 27 255 2.3E-17 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DA442_14325 097e880333c3c16abf740f6e904129b9 203 Gene3D G3DSA:1.10.530.10 38 198 9.0E-15 T 14-10-2018 DA442_14325 097e880333c3c16abf740f6e904129b9 203 SUPERFAMILY SSF53955 16 168 9.52E-23 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily DA442_15825 aa1d544319760bbc9dc80ddfc4ab28ee 162 Pfam PF09523 Protein of unknown function (DUF2390) 15 115 4.1E-28 T 14-10-2018 IPR012659 Conserved hypothetical protein CHP02444 DA442_15825 aa1d544319760bbc9dc80ddfc4ab28ee 162 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 13 119 6.2E-35 T 14-10-2018 IPR012659 Conserved hypothetical protein CHP02444 DA442_19655 d0f43f5188dde7867931f9d8a494b372 520 Pfam PF08811 Protein of unknown function (DUF1800) 41 503 1.8E-93 T 14-10-2018 IPR014917 Protein of unknown function DUF1800 DA442_22245 56a85c7f2dd8c7bdf9426668b9d8ef3e 157 Pfam PF04982 HPP family 34 146 9.9E-34 T 14-10-2018 IPR007065 HPP DA442_13330 151a71f54a6abacda5a2187b4a56706b 487 Pfam PF00263 Bacterial type II and III secretion system protein 254 417 4.4E-38 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 DA442_13330 151a71f54a6abacda5a2187b4a56706b 487 PRINTS PR00811 Bacterial general secretion pathway protein D signature 406 420 3.3E-10 T 14-10-2018 IPR001775 GspD/PilQ family DA442_13330 151a71f54a6abacda5a2187b4a56706b 487 PRINTS PR00811 Bacterial general secretion pathway protein D signature 177 187 3.3E-10 T 14-10-2018 IPR001775 GspD/PilQ family DA442_13330 151a71f54a6abacda5a2187b4a56706b 487 PRINTS PR00811 Bacterial general secretion pathway protein D signature 383 401 3.3E-10 T 14-10-2018 IPR001775 GspD/PilQ family DA442_13330 151a71f54a6abacda5a2187b4a56706b 487 PRINTS PR00811 Bacterial general secretion pathway protein D signature 249 273 3.3E-10 T 14-10-2018 IPR001775 GspD/PilQ family DA442_13330 151a71f54a6abacda5a2187b4a56706b 487 Pfam PF13629 Pilus formation protein N terminal region 27 96 2.3E-19 T 14-10-2018 IPR032789 Pilus formation protein, N-terminal DA442_19100 156639007bdc4c8aea1e19736ff6b316 198 PIRSF PIRSF011489 1 196 3.5E-84 T 14-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 DA442_19100 156639007bdc4c8aea1e19736ff6b316 198 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 185 4.4E-28 T 14-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 DA442_21060 1a58c3655808daf6ca39dd4db3babe6c 204 PIRSF PIRSF006324 1 204 1.2E-41 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DA442_21060 1a58c3655808daf6ca39dd4db3babe6c 204 Pfam PF01810 LysE type translocator 15 202 2.5E-32 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DA442_12825 f0889fb09ae0b8ede29f26cdc7da5d79 104 PIRSF PIRSF006257 1 104 1.6E-44 T 14-10-2018 IPR007384 Protein of unknown function UCP006257 DA442_12825 f0889fb09ae0b8ede29f26cdc7da5d79 104 Gene3D G3DSA:1.20.1440.40 1 104 4.2E-35 T 14-10-2018 IPR036814 YqcC-like superfamily DA442_12825 f0889fb09ae0b8ede29f26cdc7da5d79 104 SUPERFAMILY SSF158452 1 103 1.31E-38 T 14-10-2018 IPR036814 YqcC-like superfamily DA442_12825 f0889fb09ae0b8ede29f26cdc7da5d79 104 Pfam PF04287 tRNA pseudouridine synthase C 7 102 2.1E-35 T 14-10-2018 IPR023376 YqcC-like domain DA442_05990 758e594d86f852528cd004629150bf82 129 Pfam PF11042 Protein of unknown function (DUF2750) 23 122 1.0E-37 T 14-10-2018 IPR021284 Protein of unknown function DUF2750 DA442_16120 8dd8a29fa84b1066748dc0c54ee7a0a6 318 SUPERFAMILY SSF64182 5 317 5.23E-44 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily DA442_10905 665015acab53beb2961e0d65024b5de2 326 Pfam PF13084 Domain of unknown function (DUF3943) 163 272 1.5E-37 T 14-10-2018 IPR025079 Domain of unknown function DUF3943 DA442_06785 94ee2d80dcc21d7544dc698c43540cd3 171 Pfam PF01863 Protein of unknown function DUF45 94 150 3.8E-10 T 14-10-2018 IPR002725 Protein of unknown function DUF45 DA442_06785 94ee2d80dcc21d7544dc698c43540cd3 171 Gene3D G3DSA:3.30.2010.10 73 162 7.6E-6 T 14-10-2018 DA442_00510 3e08bbbbafa9e1e06f392625aabd8b29 81 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 80 25.252 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 DA442_00510 3e08bbbbafa9e1e06f392625aabd8b29 81 Pfam PF02416 mttA/Hcf106 family 4 55 6.8E-14 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 DA442_00510 3e08bbbbafa9e1e06f392625aabd8b29 81 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 1.5E-21 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 DA442_25440 b75d39ddb5efa7a0f45041f7a9e41fbc 184 SUPERFAMILY SSF81342 19 182 9.16E-23 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 DA442_25440 b75d39ddb5efa7a0f45041f7a9e41fbc 184 Pfam PF01292 Prokaryotic cytochrome b561 18 182 1.2E-22 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 DA442_23945 b3345903667cdcaab18edca10dfb6897 165 Gene3D G3DSA:2.40.440.10 19 165 7.0E-18 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like DA442_23945 b3345903667cdcaab18edca10dfb6897 165 Pfam PF03734 L,D-transpeptidase catalytic domain 29 163 9.7E-19 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 DA442_23945 b3345903667cdcaab18edca10dfb6897 165 SUPERFAMILY SSF141523 29 163 4.45E-24 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like DA442_20010 000943cfde53d7aa2f0cdaef1c19ebb4 506 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 70 500 7.4E-159 T 14-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath DA442_20010 000943cfde53d7aa2f0cdaef1c19ebb4 506 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 63 500 4.5E-131 T 14-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath DA442_17695 559f999c88f1d762c42c2e0bc324eef9 411 Pfam PF02687 FtsX-like permease family 299 403 2.6E-10 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DA442_17695 559f999c88f1d762c42c2e0bc324eef9 411 Pfam PF12704 MacB-like periplasmic core domain 19 225 6.3E-15 T 14-10-2018 IPR025857 MacB-like periplasmic core domain DA442_24795 92e7af2a28efbbcbab67534efc8c7f97 259 SUPERFAMILY SSF53335 51 237 6.21E-11 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DA442_24795 92e7af2a28efbbcbab67534efc8c7f97 259 Pfam PF13489 Methyltransferase domain 52 217 1.2E-6 T 14-10-2018 DA442_22850 d1ac3fff0451255844d25db0742c6a3f 198 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 76 171 1.0E-9 T 14-10-2018 IPR032871 AHH domain-containing protein DA442_05630 b4e8b805395776c1c0856c3eb25854e8 329 Pfam PF03547 Membrane transport protein 175 318 1.0E-13 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 DA442_09735 0de0dc387ee10e918377e5c2d218b954 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 1.0E-10 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_05390 3f50b12f4875a4c99f58fd60a3264586 261 Pfam PF02698 DUF218 domain 80 242 2.9E-28 T 14-10-2018 IPR003848 Domain of unknown function DUF218 DA442_01795 3e8a43453115d0124969b21b1fe74856 161 Pfam PF12821 Threonine/Serine exporter, ThrE 17 151 9.0E-38 T 14-10-2018 IPR024528 Threonine/Serine exporter, ThrE DA442_09425 455949f2c52b491b422b1615346841c6 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 5.2E-16 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_09565 dde319b1293cc91ed2f3c99f6952d0a8 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 7.4E-15 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_20555 17d46d1ce9e0814d2a509fec40cc2142 30 Pfam PF10617 Protein of unknown function (DUF2474) 1 30 1.5E-13 T 14-10-2018 IPR018895 Protein of unknown function DUF2474 DA442_15020 25c3242acc03122b0688a67d575a2e5e 356 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 354 1.2E-132 T 14-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 DA442_15020 25c3242acc03122b0688a67d575a2e5e 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 8 354 3.9E-70 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 DA442_21755 0f5414149d1ee206cc45cc7af869f874 188 Pfam PF07603 Protein of unknown function (DUF1566) 42 184 2.5E-21 T 14-10-2018 IPR011460 Protein of unknown function DUF1566 DA442_18020 433504512cdc9096e149c227717acf0e 200 Gene3D G3DSA:1.20.120.80 15 200 1.1E-57 T 14-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_18020 433504512cdc9096e149c227717acf0e 200 SUPERFAMILY SSF81452 8 198 1.7E-58 T 14-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_18020 433504512cdc9096e149c227717acf0e 200 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 21 200 4.1E-84 T 14-10-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 DA442_18020 433504512cdc9096e149c227717acf0e 200 Pfam PF00510 Cytochrome c oxidase subunit III 8 198 2.8E-17 T 14-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_00065 29e5144c676220cfc79e820602524b47 184 Pfam PF01169 Uncharacterized protein family UPF0016 7 80 1.4E-20 T 14-10-2018 IPR001727 Gdt1 family DA442_00065 29e5144c676220cfc79e820602524b47 184 Pfam PF01169 Uncharacterized protein family UPF0016 103 178 1.5E-20 T 14-10-2018 IPR001727 Gdt1 family DA442_16865 7dbd13d0cf427e2670a09038cb1c5e88 109 Pfam PF10694 Protein of unknown function (DUF2500) 2 105 1.2E-24 T 14-10-2018 IPR019635 Protein of unknown function DUF2500 DA442_16865 7dbd13d0cf427e2670a09038cb1c5e88 109 Gene3D G3DSA:2.40.50.660 32 108 6.4E-7 T 14-10-2018 DA442_10360 009ebf2aa4dee00116de79523d0278e9 122 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 118 2.6E-8 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DA442_10360 009ebf2aa4dee00116de79523d0278e9 122 Gene3D G3DSA:3.10.180.10 6 122 1.0E-28 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DA442_10360 009ebf2aa4dee00116de79523d0278e9 122 SUPERFAMILY SSF54593 1 118 1.16E-20 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DA442_25305 049e0043900420c9c6e9f14e5298e697 202 SUPERFAMILY SSF51182 27 77 8.01E-5 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DA442_24535 9a5c9f6bf05ac5faa4d1790df6b3d8e1 93 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 90 3.5E-16 T 14-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 DA442_24535 9a5c9f6bf05ac5faa4d1790df6b3d8e1 93 Pfam PF04316 Anti-sigma-28 factor, FlgM 43 86 4.1E-6 T 14-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal DA442_24535 9a5c9f6bf05ac5faa4d1790df6b3d8e1 93 SUPERFAMILY SSF101498 26 89 2.09E-8 T 14-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily DA442_08135 0b61dbf4c98d0d3183e2d25d0e7927d8 350 Gene3D G3DSA:1.20.950.20 118 336 4.3E-66 T 14-10-2018 DA442_08135 0b61dbf4c98d0d3183e2d25d0e7927d8 350 Pfam PF01292 Prokaryotic cytochrome b561 125 306 5.7E-26 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 DA442_08135 0b61dbf4c98d0d3183e2d25d0e7927d8 350 SUPERFAMILY SSF81342 119 332 1.1E-46 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 DA442_08135 0b61dbf4c98d0d3183e2d25d0e7927d8 350 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 122 326 3.6E-84 T 14-10-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 DA442_10765 9d2bee1977221230d58f539090c59334 179 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 30 161 4.8E-27 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ DA442_09555 848c636c35a904a8c9822f70130c2bf4 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 1.0E-15 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_24450 2fb643cbb2345a82fa1c23f797ed5aea 466 Pfam PF01266 FAD dependent oxidoreductase 30 393 2.5E-46 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DA442_24450 2fb643cbb2345a82fa1c23f797ed5aea 466 Gene3D G3DSA:3.30.9.10 124 354 1.7E-58 T 14-10-2018 DA442_24450 2fb643cbb2345a82fa1c23f797ed5aea 466 TIGRFAM TIGR03329 Phn_aa_oxid: putative aminophosphonate oxidoreductase 5 464 2.1E-257 T 14-10-2018 IPR017715 Putative aminophosphonate oxidoreductase DA442_24450 2fb643cbb2345a82fa1c23f797ed5aea 466 SUPERFAMILY SSF51905 17 308 6.29E-35 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_24450 2fb643cbb2345a82fa1c23f797ed5aea 466 Gene3D G3DSA:3.50.50.60 30 395 1.7E-58 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DA442_13735 d629ebd6bb0f062466a9876aa5cc8e39 1225 SUPERFAMILY SSF52540 66 310 4.28E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_23200 cc0246964b3a458f7728a1c5cc84974f 656 Pfam PF11826 Protein of unknown function (DUF3346) 290 514 2.9E-141 T 14-10-2018 IPR021781 Protein of unknown function DUF3346 DA442_23690 b8fce6ff2bf9d34752ed5027d7864fbd 255 SUPERFAMILY SSF46785 97 154 3.87E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DA442_04980 b5f00cc08e6763c983f26c33f415e1a8 144 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 34 136 1.3E-43 T 14-10-2018 IPR039366 YscW/ExsB DA442_21720 f4a028b48838a25e526896878028423e 547 Pfam PF13584 Oxygen tolerance 16 447 6.4E-74 T 14-10-2018 IPR025738 Aerotolerance-related protein BatD DA442_09500 845bafddbdab4bdcd53d7632553e39be 29 Pfam PF11665 Protein of unknown function (DUF3265) 2 29 9.3E-15 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_13125 868c9f133794b6045181ce4060365783 324 Gene3D G3DSA:1.50.10.150 5 318 1.9E-45 T 14-10-2018 IPR038665 Voltage-dependent anion channel superfamily DA442_13125 868c9f133794b6045181ce4060365783 324 Pfam PF03595 Voltage-dependent anion channel 19 306 2.0E-31 T 14-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 DA442_06560 a2b418ae59216b90fb5d4f129df76137 331 Pfam PF11383 Protein of unknown function (DUF3187) 6 322 2.9E-134 T 14-10-2018 IPR021523 Protein of unknown function DUF3187 DA442_21130 f9626bdbb4c215d6f61fac8931897327 440 Pfam PF03109 ABC1 family 115 230 7.0E-29 T 14-10-2018 IPR004147 UbiB domain DA442_21130 f9626bdbb4c215d6f61fac8931897327 440 SUPERFAMILY SSF56112 103 326 8.78E-14 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily DA442_25205 954864452b07ce92a675c67a8f4540ec 236 SUPERFAMILY SSF55681 4 233 5.57E-45 T 14-10-2018 DA442_25205 954864452b07ce92a675c67a8f4540ec 236 Gene3D G3DSA:3.30.930.10 3 236 1.3E-42 T 14-10-2018 DA442_12525 51d3866dc263540b33535c55aa15dc40 110 Pfam PF13698 Domain of unknown function (DUF4156) 24 108 1.0E-24 T 14-10-2018 IPR025294 Protein of unknown function DUF4156 DA442_10800 7f769286a5548e7c8bee04fea494bccb 360 Pfam PF07433 Protein of unknown function (DUF1513) 67 359 3.4E-112 T 14-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 DA442_10800 7f769286a5548e7c8bee04fea494bccb 360 SUPERFAMILY SSF50969 60 314 9.42E-11 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like DA442_10800 7f769286a5548e7c8bee04fea494bccb 360 PIRSF PIRSF028101 4 360 3.3E-167 T 14-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 DA442_03925 9b95c481413a7ae4eb609efd6c885514 269 SUPERFAMILY SSF48452 191 255 2.76E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DA442_03925 9b95c481413a7ae4eb609efd6c885514 269 Pfam PF13369 Transglutaminase-like superfamily 33 184 4.3E-44 T 14-10-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 DA442_03925 9b95c481413a7ae4eb609efd6c885514 269 Pfam PF13371 Tetratricopeptide repeat 187 259 3.4E-23 T 14-10-2018 DA442_23585 22d6de18205f9eb74d0981dde9c4ad63 211 Pfam PF12408 Ribose-5-phosphate isomerase 163 209 3.8E-21 T 14-10-2018 IPR022133 Ribose-5-phosphate isomerase, C-terminal DA442_23585 22d6de18205f9eb74d0981dde9c4ad63 211 SUPERFAMILY SSF89623 1 161 4.71E-35 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 DA442_23585 22d6de18205f9eb74d0981dde9c4ad63 211 Pfam PF02502 Ribose/Galactose Isomerase 3 136 4.1E-28 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 DA442_23585 22d6de18205f9eb74d0981dde9c4ad63 211 Gene3D G3DSA:3.40.1400.10 1 211 8.5E-101 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 DA442_02155 a15cd5ea85fe881c35f30392eb122d80 419 Pfam PF01384 Phosphate transporter family 26 407 1.7E-112 T 14-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 DA442_19170 e8d3f23aeb5e350df75a20f1353c9bbe 185 Gene3D G3DSA:2.30.30.40 115 185 3.8E-24 T 14-10-2018 DA442_19170 e8d3f23aeb5e350df75a20f1353c9bbe 185 Pfam PF08274 PhnA Zinc-Ribbon 13 52 1.5E-11 T 14-10-2018 IPR013987 PhnA protein, N-terminal DA442_19170 e8d3f23aeb5e350df75a20f1353c9bbe 185 SMART SM00782 6 52 2.0E-30 T 14-10-2018 IPR013991 PhnA protein N-terminal, proteobacterial DA442_19170 e8d3f23aeb5e350df75a20f1353c9bbe 185 Pfam PF03831 PhnA domain 119 184 9.5E-23 T 14-10-2018 IPR013988 PhnA protein, C-terminal DA442_19170 e8d3f23aeb5e350df75a20f1353c9bbe 185 SUPERFAMILY SSF82057 117 184 1.79E-20 T 14-10-2018 DA442_08120 b4f4fba01c9efbdb4557a3f0a5e21985 67 TIGRFAM TIGR02811 formate_TAT: formate dehydrogenase region TAT target 2 67 6.8E-33 T 14-10-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing DA442_08120 b4f4fba01c9efbdb4557a3f0a5e21985 67 PIRSF PIRSF036704 1 67 2.8E-35 T 14-10-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing DA442_08120 b4f4fba01c9efbdb4557a3f0a5e21985 67 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 10 38 3.9E-4 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DA442_23760 2acf31d8d7e16d41171e08ee8c4acaa3 450 Pfam PF02447 GntP family permease 1 448 2.6E-98 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 DA442_24690 3ecd73bd2a00aa1449439654c4746821 356 SUPERFAMILY SSF51412 10 330 1.27E-62 T 14-10-2018 DA442_24690 3ecd73bd2a00aa1449439654c4746821 356 Gene3D G3DSA:3.20.20.70 3 352 4.8E-108 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DA442_24690 3ecd73bd2a00aa1449439654c4746821 356 Pfam PF03060 Nitronate monooxygenase 7 346 2.9E-71 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 DA442_13290 a60088288673e7af89e085e8e0e50b8d 313 Gene3D G3DSA:1.20.81.30 157 278 1.4E-6 T 14-10-2018 DA442_13290 a60088288673e7af89e085e8e0e50b8d 313 Pfam PF00482 Type II secretion system (T2SS), protein F 172 299 2.6E-23 T 14-10-2018 IPR018076 Type II secretion system F domain DA442_23440 4ee7506a60efa6d04fdb47ae1e2e186c 476 Pfam PF03600 Citrate transporter 45 420 1.7E-54 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 DA442_23440 4ee7506a60efa6d04fdb47ae1e2e186c 476 TIGRFAM TIGR00775 NhaD: Na+/H+ antiporter, NhaD family 45 463 3.4E-190 T 14-10-2018 IPR004672 Na+/H+ antiporter NhaD DA442_24845 f28deda5e7b044a7548b704fe256a14a 69 Pfam PF04400 (Na+)-NQR maturation NqrM 21 62 8.2E-18 T 14-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM DA442_22055 927b414999fd3dc476c873f877013306 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 124 2.7E-18 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DA442_22055 927b414999fd3dc476c873f877013306 127 SUPERFAMILY SSF54593 1 126 1.79E-30 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DA442_22055 927b414999fd3dc476c873f877013306 127 Gene3D G3DSA:3.10.180.10 7 126 1.9E-31 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DA442_09970 53ebd2e329d635ccc024f08ef5857832 40 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 1.6E-16 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_20710 710f706157a598d9f6a80a680191b677 412 Pfam PF01566 Natural resistance-associated macrophage protein 55 379 2.3E-19 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 DA442_21760 2e0310fa9f20af58f6a8278546c92934 480 Pfam PF07603 Protein of unknown function (DUF1566) 294 416 3.2E-11 T 14-10-2018 IPR011460 Protein of unknown function DUF1566 DA442_00765 4e711e88b6882b8e2a7352511c647b28 241 SUPERFAMILY SSF53271 67 239 5.51E-34 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like DA442_00765 4e711e88b6882b8e2a7352511c647b28 241 Gene3D G3DSA:3.40.50.2020 99 240 7.5E-17 T 14-10-2018 DA442_00765 4e711e88b6882b8e2a7352511c647b28 241 Pfam PF00156 Phosphoribosyl transferase domain 145 237 4.7E-11 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DA442_24125 6a14dce81b43aed389c8369d2b2c823f 375 Pfam PF13729 F plasmid transfer operon, TraF, protein 47 292 3.1E-62 T 14-10-2018 IPR032811 Putative conjugal transfer protein TraF-related DA442_04710 7aa80e71a778c6ba3fdf6b1df9a0da33 246 SUPERFAMILY SSF53955 77 193 8.34E-12 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily DA442_04710 7aa80e71a778c6ba3fdf6b1df9a0da33 246 Gene3D G3DSA:1.10.530.10 85 196 5.3E-7 T 14-10-2018 DA442_21970 bb300340ff981c63810fc2532e0094df 177 Pfam PF05229 Spore Coat Protein U domain 25 174 1.4E-31 T 14-10-2018 IPR007893 Spore coat protein U DA442_11370 ec4afc3122cd5fb9f7e7b07a13a04ac2 97 Pfam PF06305 Lipopolysaccharide assembly protein A domain 22 81 9.3E-18 T 14-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 DA442_11370 ec4afc3122cd5fb9f7e7b07a13a04ac2 97 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 93 20.821 T 14-10-2018 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 DA442_23340 ea2f39cbae75abece18dc6af5c772560 411 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 10 410 2.5E-134 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 DA442_23340 ea2f39cbae75abece18dc6af5c772560 411 Pfam PF03616 Sodium/glutamate symporter 6 379 5.4E-151 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 DA442_23340 ea2f39cbae75abece18dc6af5c772560 411 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 5 410 23.925 T 14-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 DA442_09290 7568a8d11e01ff3213ea89c0c8f64237 148 Pfam PF11695 Domain of unknown function (DUF3291) 3 140 6.2E-58 T 14-10-2018 IPR021708 Domain of unknown function DUF3291 DA442_09290 7568a8d11e01ff3213ea89c0c8f64237 148 SUPERFAMILY SSF54909 9 114 2.31E-15 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel DA442_25400 f01a18b85b32d41ec780e3bf961efb45 485 Pfam PF11840 Protein of unknown function (DUF3360) 2 484 2.4E-267 T 14-10-2018 IPR021794 Protein of unknown function DUF3360 DA442_07630 2c990ee505d7f5a55fb1c7e12244cc34 268 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 51 258 2.1E-61 T 14-10-2018 IPR017732 Type IV / VI secretion system, DotU DA442_07630 2c990ee505d7f5a55fb1c7e12244cc34 268 Pfam PF09850 Type VI secretion system protein DotU 52 251 2.9E-50 T 14-10-2018 IPR017732 Type IV / VI secretion system, DotU DA442_07630 2c990ee505d7f5a55fb1c7e12244cc34 268 Gene3D G3DSA:1.25.40.590 49 206 2.0E-47 T 14-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily DA442_12480 d7b0de7af20e7c2a32fdae6ba787bc26 666 Pfam PF07196 Flagellin hook IN motif 125 177 3.3E-6 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 DA442_12480 d7b0de7af20e7c2a32fdae6ba787bc26 666 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 431 655 1.1E-57 T 14-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 DA442_12480 d7b0de7af20e7c2a32fdae6ba787bc26 666 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 107 6.9E-21 T 14-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 DA442_06030 6e86eca36490af65307a5460b5ef492f 77 Pfam PF06667 Phage shock protein B 4 74 1.7E-31 T 14-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 DA442_06030 6e86eca36490af65307a5460b5ef492f 77 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 75 2.7E-34 T 14-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 DA442_08415 787ad3d283885a50711125c0fd6085f7 882 Pfam PF02470 MlaD protein 398 463 4.5E-6 T 14-10-2018 IPR003399 Mce/MlaD DA442_08415 787ad3d283885a50711125c0fd6085f7 882 Pfam PF02470 MlaD protein 47 138 6.1E-13 T 14-10-2018 IPR003399 Mce/MlaD DA442_08415 787ad3d283885a50711125c0fd6085f7 882 Pfam PF02470 MlaD protein 751 820 2.2E-8 T 14-10-2018 IPR003399 Mce/MlaD DA442_08415 787ad3d283885a50711125c0fd6085f7 882 Pfam PF02470 MlaD protein 283 356 7.4E-7 T 14-10-2018 IPR003399 Mce/MlaD DA442_12185 ad074658f3fcfd2e81690e849c769126 87 Pfam PF08891 YfcL protein 4 84 5.4E-33 T 14-10-2018 IPR014987 Uncharacterised protein family YfcL DA442_07115 feda5fc093a6ceea454901db021c52df 220 SUPERFAMILY SSF58046 157 196 9.02E-5 T 14-10-2018 DA442_07115 feda5fc093a6ceea454901db021c52df 220 Gene3D G3DSA:3.30.60.240 174 198 4.7E-7 T 14-10-2018 DA442_15545 b52a8c004b5b5d20804086f3090e997c 391 Gene3D G3DSA:2.40.160.50 103 389 1.1E-12 T 14-10-2018 DA442_15545 b52a8c004b5b5d20804086f3090e997c 391 Pfam PF01103 Surface antigen 108 364 3.2E-6 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 DA442_01990 5fd9680b3987c80e8c976dbed656774d 349 Pfam PF14321 Domain of unknown function (DUF4382) 32 200 1.0E-20 T 14-10-2018 IPR025491 Domain of unknown function DUF4382 DA442_07635 4e8005bf59856ec224c114df4fb1d9ff 505 Pfam PF13665 Domain of unknown function (DUF4150) 22 127 7.2E-35 T 14-10-2018 IPR025425 Domain of unknown function DUF4150 DA442_13820 62907b0875c56232e1a43a91053093e9 151 Gene3D G3DSA:3.40.630.30 3 149 2.5E-39 T 14-10-2018 DA442_13820 62907b0875c56232e1a43a91053093e9 151 SUPERFAMILY SSF55729 1 147 5.49E-31 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_13820 62907b0875c56232e1a43a91053093e9 151 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 12 145 6.9E-36 T 14-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 DA442_13820 62907b0875c56232e1a43a91053093e9 151 Pfam PF00583 Acetyltransferase (GNAT) family 19 121 2.1E-14 T 14-10-2018 IPR000182 GNAT domain DA442_22480 520edb2b3d4b49dd9e76045e5fa17da2 245 Pfam PF07670 Nucleoside recognition 85 179 7.0E-11 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 DA442_09655 496cbd2ec4457165ef894f64f71c9882 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 1.0E-14 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_10530 b4f1b9000cabde1613680beab70bffc8 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 2.2E-15 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_25885 b3eee73b3c1e5191399c378b865a7c65 263 Pfam PF02104 SURF1 family 31 238 7.7E-22 T 14-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DA442_21705 abe24b48fafebd5d19c69b56192e79fc 158 Pfam PF14316 Domain of unknown function (DUF4381) 9 146 4.6E-37 T 14-10-2018 IPR025489 Protein of unknown function (DUF4381 DA442_12425 b4b46ea59ff6bda6dcdcd7acbc3437a1 147 Pfam PF02050 Flagellar FliJ protein 17 140 2.6E-30 T 14-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 DA442_12425 b4b46ea59ff6bda6dcdcd7acbc3437a1 147 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 3 142 3.0E-39 T 14-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 DA442_05270 940c2494e2b5dadd765c48a0a5b92966 359 Gene3D G3DSA:2.40.160.10 53 359 1.8E-23 T 14-10-2018 IPR023614 Porin domain superfamily DA442_05270 940c2494e2b5dadd765c48a0a5b92966 359 SUPERFAMILY SSF56935 55 359 6.41E-31 T 14-10-2018 DA442_05270 940c2494e2b5dadd765c48a0a5b92966 359 Pfam PF13609 Gram-negative porin 39 340 1.9E-26 T 14-10-2018 DA442_10025 971b946645db0d21ecce13aab2098cbe 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 1.1E-14 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_19160 59e4ed712940e35efe2679184ca8b94b 339 Pfam PF03741 Integral membrane protein TerC family 92 293 3.3E-54 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 DA442_19160 59e4ed712940e35efe2679184ca8b94b 339 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 20 325 4.1E-106 T 14-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 DA442_18730 547491a8249b4720b3eed3cd0ec7a5a8 616 Pfam PF01757 Acyltransferase family 5 318 1.3E-28 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 DA442_15025 e9c06b87a7d11875005bc90eff05a4f2 366 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 346 1.6E-117 T 14-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 DA442_15025 e9c06b87a7d11875005bc90eff05a4f2 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 344 2.8E-70 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 DA442_09485 aae9c533928a49c03a776c939d0d22bd 88 Pfam PF01337 Barstar (barnase inhibitor) 2 80 9.2E-25 T 14-10-2018 IPR000468 Barstar (barnase inhibitor) DA442_09485 aae9c533928a49c03a776c939d0d22bd 88 SUPERFAMILY SSF52038 2 86 8.89E-24 T 14-10-2018 IPR035905 Barstar-like superfamily DA442_09485 aae9c533928a49c03a776c939d0d22bd 88 Gene3D G3DSA:3.30.370.10 1 85 2.0E-18 T 14-10-2018 IPR035905 Barstar-like superfamily DA442_13660 147892cfc5ae838a5d3a503568f0ab61 298 Pfam PF06586 TraK protein 65 275 3.4E-15 T 14-10-2018 IPR010563 Pilus assembly TraK DA442_09365 9d610dcb4d86061d975e85ef6f20331e 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 1.6E-14 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_00670 af531c87bb28008080bfa4b33d5cf884 684 Pfam PF05170 AsmA family 1 569 1.4E-178 T 14-10-2018 IPR007844 AsmA DA442_03465 edc67d1417d1231dbbc3d057155ea41d 129 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 4 129 31.201 T 14-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 DA442_03465 edc67d1417d1231dbbc3d057155ea41d 129 Gene3D G3DSA:3.30.310.230 2 128 4.8E-45 T 14-10-2018 IPR038208 Sigma factor-binding protein Crl superfamily GO:0045893 DA442_03465 edc67d1417d1231dbbc3d057155ea41d 129 Pfam PF07417 Transcriptional regulator Crl 6 123 1.2E-48 T 14-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 DA442_10210 2a3d9b1000a1eff99664ec5bb92ed617 46 Pfam PF11665 Protein of unknown function (DUF3265) 19 46 6.6E-8 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_20620 ce3172f411dd58dd9c10b09a2a7d7929 355 Pfam PF02653 Branched-chain amino acid transport system / permease component 50 330 7.6E-40 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DA442_16840 16ae835fbcd17c9a2c175b81c50d52f7 74 TIGRFAM TIGR03853 matur_matur: putative metal-binding protein 4 74 2.8E-25 T 14-10-2018 IPR019620 Putative metal-binding protein DA442_16840 16ae835fbcd17c9a2c175b81c50d52f7 74 Pfam PF10678 Protein of unknown function (DUF2492) 4 73 2.5E-24 T 14-10-2018 IPR019620 Putative metal-binding protein DA442_10650 25bddb62c860257c1477f2e205a606ab 417 Pfam PF03222 Tryptophan/tyrosine permease family 28 383 1.5E-17 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 DA442_23300 7a0dec67d02604fbabaa3d22a4e73743 211 Pfam PF10026 Predicted Zn-dependent protease (DUF2268) 22 210 9.7E-44 T 14-10-2018 IPR018728 Domain of unknown function DUF2268 DA442_05240 170887e351f44f19b8e2c6740451ea20 906 SMART SM01276 453 776 7.2E-43 T 14-10-2018 IPR031161 Peptidase family M60 domain DA442_05240 170887e351f44f19b8e2c6740451ea20 906 Pfam PF17291 N-terminal domain of M60-like peptidases 445 537 4.1E-6 T 14-10-2018 IPR035423 M60-like domain, N-terminal DA442_07095 f36c6b61cad9b44b316f884280860e21 479 SUPERFAMILY SSF52540 47 204 2.51E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DA442_07095 f36c6b61cad9b44b316f884280860e21 479 Pfam PF04466 Phage terminase large subunit 73 204 2.6E-19 T 14-10-2018 IPR035412 Phage terminase large subunit, N-terminal DA442_07095 f36c6b61cad9b44b316f884280860e21 479 Gene3D G3DSA:3.40.50.300 58 300 2.1E-39 T 14-10-2018 DA442_17105 cf46bfa7935d354c12224b30a5e2393e 101 Pfam PF12305 Protein of unknown function (DUF3630) 5 98 6.6E-39 T 14-10-2018 IPR022080 Protein of unknown function DUF3630 DA442_12555 85c7c95f59a65f2324dcbbd9b50f4491 67 Pfam PF11446 Protein of unknown function (DUF2897) 5 54 8.2E-22 T 14-10-2018 IPR021550 Protein of unknown function DUF2897 DA442_22765 9e77ac0bfbd8c68f9a0157719faad35f 663 Pfam PF01136 Peptidase family U32 78 293 9.4E-65 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 DA442_22765 9e77ac0bfbd8c68f9a0157719faad35f 663 Pfam PF01136 Peptidase family U32 448 591 1.3E-8 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 DA442_19200 614a46945ffe7b3bf3f77c8a401161ae 77 Pfam PF11869 Protein of unknown function (DUF3389) 1 76 2.7E-34 T 14-10-2018 IPR021811 Protein of unknown function DUF3389 DA442_10585 dc2ceb3761a6f7494283fb02a32991c2 157 Pfam PF11163 Protein of unknown function (DUF2947) 3 154 2.5E-73 T 14-10-2018 IPR021334 Protein of unknown function DUF2947 DA442_19445 e2e8374fd54f9fd8c666ae4a58fcde56 293 Pfam PF11060 Protein of unknown function (DUF2861) 22 288 1.6E-94 T 14-10-2018 IPR021290 Protein of unknown function DUF2861 DA442_05260 1d716beccaeb0215283f87e8d8cac576 261 Pfam PF01925 Sulfite exporter TauE/SafE 12 251 7.4E-46 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 DA442_10145 73ea557982ad48cc9c2aa2ac640f8e0d 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 3.0E-15 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_16970 72c76b5bcc047186906099d33f9202e3 38 Pfam PF13627 Prokaryotic lipoprotein-attachment site 6 28 2.1E-9 T 14-10-2018 IPR032831 Prokaryotic lipoprotein-attachment site DA442_05560 5a338ac17dc1895cfd5620c6519d530f 203 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 14 188 1.7E-55 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 DA442_05560 5a338ac17dc1895cfd5620c6519d530f 203 SUPERFAMILY SSF101327 15 190 5.49E-34 T 14-10-2018 IPR036255 YgfB-like superfamily DA442_05560 5a338ac17dc1895cfd5620c6519d530f 203 Pfam PF03695 Uncharacterised protein family (UPF0149) 17 192 3.3E-36 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 DA442_19730 48f5ba4d60e656a0be77d64d2f2bf218 146 Pfam PF13778 Domain of unknown function (DUF4174) 25 136 1.7E-26 T 14-10-2018 IPR025232 Domain of unknown function DUF4174 DA442_09980 446e4a33a37c962d06328bfe1837c0ed 29 Pfam PF11665 Protein of unknown function (DUF3265) 2 29 1.7E-16 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_03280 34ec50203a0fe8cfcaa158f69b7facef 203 Pfam PF09335 SNARE associated Golgi protein 37 157 5.5E-23 T 14-10-2018 IPR032816 SNARE associated Golgi protein DA442_02530 6bd12ae2c435296be2ce9de513639f31 159 SUPERFAMILY SSF56935 32 153 1.83E-6 T 14-10-2018 DA442_02530 6bd12ae2c435296be2ce9de513639f31 159 PIRSF PIRSF028680 3 159 6.1E-80 T 14-10-2018 IPR016895 Uncharacterised conserved protein UCP028680 DA442_23245 66901ad3b89be7e057ae8ef0fd00d41b 69 Pfam PF11686 Protein of unknown function (DUF3283) 4 64 5.0E-34 T 14-10-2018 IPR021700 Protein of unknown function DUF3283 DA442_13295 1d4c8459961ed32ddd5fddb7c8642fc8 322 Pfam PF00482 Type II secretion system (T2SS), protein F 156 279 7.5E-18 T 14-10-2018 IPR018076 Type II secretion system F domain DA442_23445 fef1ef80633a220b69723cf51e1dcd5d 341 Pfam PF01757 Acyltransferase family 8 326 4.2E-23 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 DA442_01675 850df3251db15016ed4e32177ec7b8c6 1255 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 920 1254 2.9E-65 T 14-10-2018 IPR007452 Translocation and assembly module TamB DA442_07245 b94bfc5d04d8d361438b621da615da86 205 Pfam PF13505 Outer membrane protein beta-barrel domain 31 205 2.3E-8 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel DA442_07245 b94bfc5d04d8d361438b621da615da86 205 SUPERFAMILY SSF56925 66 205 3.4E-6 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DA442_12580 62543e9e7b7582fa5a0b54228bd468fd 356 Pfam PF01594 AI-2E family transporter 20 345 2.8E-76 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like DA442_09790 13451be8618757777dfb70afa71271db 128 Gene3D G3DSA:3.90.79.10 1 111 2.7E-10 T 14-10-2018 DA442_09790 13451be8618757777dfb70afa71271db 128 Pfam PF00293 NUDIX domain 17 71 6.6E-9 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DA442_09790 13451be8618757777dfb70afa71271db 128 SUPERFAMILY SSF55811 9 121 9.48E-15 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DA442_25075 fe3ab0fa81d893dc4b6e01ff8ec61257 259 Pfam PF04366 Las17-binding protein actin regulator 171 256 2.4E-5 T 14-10-2018 IPR007461 Ysc84 actin-binding domain DA442_13190 526fa76723dbeda9bce159379ecd6db0 394 Pfam PF05940 NnrS protein 16 388 9.6E-109 T 14-10-2018 IPR010266 NnrS DA442_24230 4b8e7efbba88d4542a4834990e3149e0 194 Gene3D G3DSA:2.170.170.11 20 136 2.2E-28 T 14-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 DA442_24230 4b8e7efbba88d4542a4834990e3149e0 194 SUPERFAMILY SSF51645 22 189 2.22E-24 T 14-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 DA442_17900 f0d3f69b97b442ced2dcbcc072da08aa 132 Pfam PF11225 Protein of unknown function (DUF3024) 73 131 2.9E-20 T 14-10-2018 IPR021388 Bacteriophage 933W, L0084 DA442_09475 d1edf8998684d63121b70de4807f0011 251 Pfam PF13099 Domain of unknown function (DUF3944) 3 37 2.9E-15 T 14-10-2018 IPR025217 Domain of unknown function DUF3944 DA442_09475 d1edf8998684d63121b70de4807f0011 251 Pfam PF03981 Ubiquinol-cytochrome C chaperone 53 227 1.9E-35 T 14-10-2018 IPR021150 Ubiquinol-cytochrome c chaperone/UPF0174 DA442_19855 5f790a8768875ea1a8d566436f93b3ac 102 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 10 100 1.0E-12 T 14-10-2018 IPR008407 Branched-chain amino acid transport, AzlD DA442_10475 659a702ba1b9c4cbeea4cf1c28f65eba 106 Pfam PF11196 Protein of unknown function (DUF2834) 4 99 4.1E-28 T 14-10-2018 IPR021362 Protein of unknown function DUF2834 DA442_06605 1e34dc86d030f1c9a1355e1938c3bb35 263 Gene3D G3DSA:2.50.20.10 25 261 1.2E-100 T 14-10-2018 DA442_06605 1e34dc86d030f1c9a1355e1938c3bb35 263 Pfam PF17131 Outer membrane lipoprotein-sorting protein 78 261 1.4E-66 T 14-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein DA442_06605 1e34dc86d030f1c9a1355e1938c3bb35 263 SUPERFAMILY SSF89392 106 212 2.79E-5 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX DA442_23315 376c32d8714aeffec4579f6ef02c64b1 128 SUPERFAMILY SSF52833 2 40 4.54E-5 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DA442_23315 376c32d8714aeffec4579f6ef02c64b1 128 Pfam PF04134 Protein of unknown function, DUF393 6 112 6.3E-27 T 14-10-2018 IPR007263 Protein of unknown function DUF393 DA442_11580 f6dbf0c499f76bf416e4f86d79a03ea2 695 Pfam PF05170 AsmA family 1 585 2.0E-116 T 14-10-2018 IPR007844 AsmA DA442_13650 02f190a554a0258b7669c2e618dcc4a2 216 Pfam PF09676 Type IV conjugative transfer system lipoprotein (TraV) 128 173 1.1E-13 T 14-10-2018 IPR014118 Type IV conjugative transfer system protein TraV DA442_13650 02f190a554a0258b7669c2e618dcc4a2 216 TIGRFAM TIGR02747 TraV: type IV conjugative transfer system protein TraV 47 173 2.4E-12 T 14-10-2018 IPR014118 Type IV conjugative transfer system protein TraV DA442_07950 6377a9626c7c764a9d17090507a2881d 347 Pfam PF11279 Protein of unknown function (DUF3080) 37 339 3.1E-95 T 14-10-2018 IPR021431 Protein of unknown function DUF3080 DA442_13070 60e1146f84f1c63c6d3fcd3b697698a2 151 Pfam PF11012 Protein of unknown function (DUF2850) 65 142 1.4E-30 T 14-10-2018 IPR021271 Protein of unknown function DUF2850 DA442_00475 e0eefeb3325db97eff15caaad9895fdb 342 Pfam PF01594 AI-2E family transporter 14 332 1.2E-46 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like DA442_10095 eb00ca99770a81b0529fc16affe2301f 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 7.8E-13 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_18735 1740aa0911312c1a311a7d1e9f1ea3dd 91 Pfam PF03206 Nitrogen fixation protein NifW 7 72 1.8E-5 T 14-10-2018 IPR004893 Nitrogen fixation protein NifW GO:0009399 DA442_15415 50a3befaf9df7330e2d94ce177926cd3 59 Pfam PF13592 Winged helix-turn helix 11 54 1.9E-7 T 14-10-2018 IPR025959 Winged helix-turn helix domain DA442_09995 cdae048b6fb6b274666215a3c37d0f73 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 1.8E-16 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_08960 fb84b7e4b98d24606660c9d8e0f5f70e 388 Pfam PF12698 ABC-2 family transporter protein 15 360 3.0E-37 T 14-10-2018 DA442_06665 d0530fedf9634686153e664320b26985 225 Pfam PF04172 LrgB-like family 6 217 1.9E-69 T 14-10-2018 IPR007300 CidB/LrgB family DA442_21485 a317e68076f0ca4067bacc164b4dd327 410 Pfam PF04932 O-Antigen ligase 179 336 8.2E-12 T 14-10-2018 IPR007016 O-antigen ligase-related DA442_09435 31c47251646b8bb1b9030de0691c4cb5 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 3.9E-16 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_23790 645bc112ed172787561bcbefdb6ee7b2 175 SUPERFAMILY SSF55729 1 155 1.72E-31 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DA442_23790 645bc112ed172787561bcbefdb6ee7b2 175 Gene3D G3DSA:3.40.630.30 1 164 1.5E-30 T 14-10-2018 DA442_23790 645bc112ed172787561bcbefdb6ee7b2 175 Pfam PF00583 Acetyltransferase (GNAT) family 48 139 5.3E-15 T 14-10-2018 IPR000182 GNAT domain DA442_16870 ffc41208ba394f2cf1bd4a7d3bf97231 337 Pfam PF01757 Acyltransferase family 7 326 3.6E-29 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 DA442_22455 a8283df74690aab48437e239bf50474d 423 Pfam PF08874 Domain of unknown function (DUF1835) 100 215 2.8E-14 T 14-10-2018 IPR014973 Protein of unknown function DUF1835 DA442_24620 6da81dfd330e0cf0f4c716b7ce2e3017 87 Pfam PF11216 Protein of unknown function (DUF3012) 56 87 7.9E-21 T 14-10-2018 IPR021379 Protein of unknown function DUF3012 DA442_24620 6da81dfd330e0cf0f4c716b7ce2e3017 87 Pfam PF11216 Protein of unknown function (DUF3012) 21 52 3.1E-19 T 14-10-2018 IPR021379 Protein of unknown function DUF3012 DA442_03965 ada3ecb63484ce113e5e6965a1ecf55f 290 Pfam PF01963 TraB family 26 278 9.3E-53 T 14-10-2018 IPR002816 Pheromone shutdown, TraB DA442_10270 9cebc70c132ab9b8177a7df74d0ee9cb 45 Pfam PF11665 Protein of unknown function (DUF3265) 18 45 3.7E-10 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_04405 77d9312ef4812c8834c31f2c2b55cf53 256 Pfam PF08907 Domain of unknown function (DUF1853) 28 212 3.5E-39 T 14-10-2018 IPR015003 Protein of unknown function DUF1853 DA442_07030 0c7654dcc64491a8f5d908743adff37b 133 Pfam PF05766 Bacteriophage Lambda NinG protein 2 119 5.9E-39 T 14-10-2018 IPR008713 Bacteriophage lambda NinG DA442_11010 5e574226282986cc10d22760ec2aef27 41 Pfam PF08056 Tryptophan operon leader peptide 1 41 5.1E-31 T 14-10-2018 IPR012639 Tryptophan operon leader peptide DA442_11010 5e574226282986cc10d22760ec2aef27 41 ProDom PD926058 BIOSYNTHESIS PEPTIDE LEADER AROMATIC VC1176 VV1222 OPERON ACID AMINO AMINO-ACID 1 41 1.0E-7 T 14-10-2018 IPR012639 Tryptophan operon leader peptide DA442_05785 25b802102961a25bdf7013bd2194dec5 186 Pfam PF16036 Chalcone isomerase-like 48 182 1.2E-7 T 14-10-2018 IPR016087 Chalcone isomerase GO:0016872 DA442_11895 7cebde696e70248298b7cb27e2c76a9a 332 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 332 46.653 T 14-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 DA442_11895 7cebde696e70248298b7cb27e2c76a9a 332 Pfam PF04245 37-kD nucleoid-associated bacterial protein 9 326 9.1E-100 T 14-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 DA442_05545 b7772349992d00417ba7904590a6dfdb 138 Pfam PF03994 Domain of Unknown Function (DUF350) 17 70 2.2E-11 T 14-10-2018 IPR007140 Protein of unknown function DUF350 DA442_05545 b7772349992d00417ba7904590a6dfdb 138 Pfam PF03994 Domain of Unknown Function (DUF350) 83 136 1.3E-13 T 14-10-2018 IPR007140 Protein of unknown function DUF350 DA442_09795 42d9185e99689714141432f4c8f4bebc 29 Pfam PF11665 Protein of unknown function (DUF3265) 2 29 1.5E-13 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_22660 df23694f7b3f4a28abbba471601a164f 317 SUPERFAMILY SSF51261 49 267 1.62E-51 T 14-10-2018 IPR011055 Duplicated hybrid motif DA442_22660 df23694f7b3f4a28abbba471601a164f 317 Pfam PF01551 Peptidase family M23 169 264 1.9E-29 T 14-10-2018 IPR016047 Peptidase M23 DA442_22660 df23694f7b3f4a28abbba471601a164f 317 Gene3D G3DSA:2.70.70.10 115 270 2.9E-41 T 14-10-2018 IPR011055 Duplicated hybrid motif DA442_20850 1f0e7030da7101653b1fa198604a99d3 287 PIRSF PIRSF028200 12 287 1.6E-103 T 14-10-2018 IPR016875 Uncharacterised conserved protein UCP028200 DA442_03215 815cd617193981c43809ddf21b365e39 196 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 7 16 - T 14-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 DA442_03215 815cd617193981c43809ddf21b365e39 196 Pfam PF01184 GPR1/FUN34/yaaH family 3 174 4.4E-35 T 14-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 DA442_22475 f9b12a3b377ad2fd95c53f82d88c3af6 155 Pfam PF07670 Nucleoside recognition 31 124 8.4E-7 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 DA442_09480 747a00db59468a977a3d6208cb0eb324 517 Pfam PF14082 Domain of unknown function (DUF4263) 364 503 3.4E-22 T 14-10-2018 IPR025359 Protein of unknown function DUF4263 DA442_21855 7631bb938292851710d462643ac55913 279 Pfam PF02361 Cobalt transport protein 17 236 3.4E-32 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component DA442_09830 af6a318ac4f2a87815ec56385a198130 60 Pfam PF11665 Protein of unknown function (DUF3265) 2 29 1.8E-15 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_10225 fcbc9cc921c3444cc667810272a7a6df 29 Pfam PF11665 Protein of unknown function (DUF3265) 2 29 4.5E-14 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_13055 7735b3cc595f36324f1a2634f4b30131 269 SUPERFAMILY SSF69572 9 267 3.14E-64 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 DA442_13055 7735b3cc595f36324f1a2634f4b30131 269 Pfam PF00899 ThiF family 24 198 4.2E-38 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 DA442_13055 7735b3cc595f36324f1a2634f4b30131 269 Gene3D G3DSA:3.40.50.720 5 269 9.6E-110 T 14-10-2018 DA442_04680 1e9afbe002c9f4c5ca79e786f786e9f2 86 Pfam PF00550 Phosphopantetheine attachment site 8 80 2.8E-9 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain DA442_04680 1e9afbe002c9f4c5ca79e786f786e9f2 86 SUPERFAMILY SSF47336 5 85 9.29E-14 T 14-10-2018 IPR036736 ACP-like superfamily DA442_04680 1e9afbe002c9f4c5ca79e786f786e9f2 86 Gene3D G3DSA:1.10.1200.10 3 86 6.1E-21 T 14-10-2018 IPR036736 ACP-like superfamily DA442_13625 ea3e6f7e147591017f2810045c6eedcd 317 Pfam PF07751 Abi-like protein 33 187 2.8E-7 T 14-10-2018 IPR011664 Abortive infection system protein AbiD/AbiF-like DA442_15780 8ebdc2a8c02a61a877d396676fb814b2 75 Hamap MF_00715 Protein SlyX [slyX]. 8 75 17.684 T 14-10-2018 IPR007236 SlyX DA442_15780 8ebdc2a8c02a61a877d396676fb814b2 75 Pfam PF04102 SlyX 9 75 1.6E-24 T 14-10-2018 IPR007236 SlyX DA442_15780 8ebdc2a8c02a61a877d396676fb814b2 75 Gene3D G3DSA:1.20.5.300 1 52 8.7E-7 T 14-10-2018 DA442_02290 2647ede9ef9123536d0c9a5c7b6cce32 219 Pfam PF04972 BON domain 120 185 1.9E-16 T 14-10-2018 IPR007055 BON domain DA442_02290 2647ede9ef9123536d0c9a5c7b6cce32 219 Pfam PF04972 BON domain 44 110 3.8E-13 T 14-10-2018 IPR007055 BON domain DA442_02290 2647ede9ef9123536d0c9a5c7b6cce32 219 SMART SM00749 125 188 0.0033 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria DA442_02290 2647ede9ef9123536d0c9a5c7b6cce32 219 SMART SM00749 48 111 33.0 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria DA442_20320 a5dd720c09240625ba1f5d8c27ee4783 225 Pfam PF09335 SNARE associated Golgi protein 54 173 6.8E-17 T 14-10-2018 IPR032816 SNARE associated Golgi protein DA442_22665 4fa5bbf2c3c2d2a2c1511709998b5fcb 150 Pfam PF04519 Polymer-forming cytoskeletal 18 112 3.8E-24 T 14-10-2018 IPR007607 Bactofilin A/B DA442_13315 8e48eaa355a0975f583359c3f05f251f 145 Pfam PF07811 TadE-like protein 9 51 2.9E-10 T 14-10-2018 IPR012495 TadE-like DA442_14680 60e8c61c76fa737b3267dbd4a1bbf191 163 Gene3D G3DSA:3.90.960.10 11 162 2.8E-23 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DA442_14680 60e8c61c76fa737b3267dbd4a1bbf191 163 SUPERFAMILY SSF55826 12 154 1.44E-30 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DA442_14680 60e8c61c76fa737b3267dbd4a1bbf191 163 Pfam PF04073 Aminoacyl-tRNA editing domain 42 149 1.9E-17 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 DA442_10465 3e412e7f830d678e8b42f5612563863d 310 Pfam PF14022 Protein of unknown function (DUF4238) 8 298 4.8E-29 T 14-10-2018 IPR025332 Protein of unknown function DUF4238 DA442_10420 963c3798051f3556e7ca41436a70aa7b 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 1.0E-13 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_09775 bfc57e5b1cee8d2d72a457d0c7fa1fb3 36 Pfam PF11665 Protein of unknown function (DUF3265) 9 36 3.5E-10 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_19405 f294103ba2af5529fca1e3bb133c3f9e 73 Pfam PF12472 Phage related protein 1 44 8.6E-16 T 14-10-2018 IPR021096 Vibrio phage VSK, Orf152 DA442_12930 ee5fee26a6b30fea8604031a92ee8701 77 Pfam PF04400 (Na+)-NQR maturation NqrM 22 63 1.7E-21 T 14-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM DA442_04880 75ad8aa77982d3a228579ee23644e691 310 Pfam PF03601 Conserved hypothetical protein 698 24 291 5.4E-55 T 14-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 DA442_18950 cedbe7a45ae083e59138166ced82fd1e 324 SUPERFAMILY SSF56219 12 321 1.27E-31 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DA442_18950 cedbe7a45ae083e59138166ced82fd1e 324 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 51 313 2.2E-9 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase DA442_18950 cedbe7a45ae083e59138166ced82fd1e 324 Gene3D G3DSA:3.60.10.10 7 317 3.7E-33 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DA442_05130 65b3f3c2cfb3c23215b426db66044499 169 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 23 164 3.3E-45 T 14-10-2018 IPR018639 Domain of unknown function DUF2062 DA442_09875 a58ce4dd264d6ddfa7ba49e8252cbbda 29 Pfam PF11665 Protein of unknown function (DUF3265) 2 29 2.4E-14 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_03205 e8683063ad1943adfd2af88c3f9ccc79 506 Pfam PF03553 Na+/H+ antiporter family 161 469 2.7E-50 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 DA442_07355 fe6b50f9816d6c512a4fc29bd33caab8 70 Pfam PF07869 Protein of unknown function (DUF1656) 7 61 1.6E-14 T 14-10-2018 IPR012451 Protein of unknown function DUF1656 DA442_07855 6e74b54da807a8981753f9fba2b699ac 212 Pfam PF02397 Bacterial sugar transferase 14 207 5.6E-62 T 14-10-2018 IPR003362 Bacterial sugar transferase DA442_05955 bd735477c88a90c60db4430b9036b468 270 Pfam PF03649 Uncharacterised protein family (UPF0014) 9 245 1.7E-71 T 14-10-2018 IPR005226 UPF0014 family DA442_07985 19551a27bd6366571d66463f5758e7ad 114 Pfam PF12290 Protein of unknown function (DUF3802) 2 110 1.6E-43 T 14-10-2018 IPR020979 Uncharacterised protein family A0KLC6 DA442_18260 2a4ffe5f09e985ed0b02b05660b03f93 771 Pfam PF06934 Fatty acid cis/trans isomerase (CTI) 89 770 2.9E-301 T 14-10-2018 IPR010706 Fatty acid cis-trans isomerase DA442_25355 9fd8c59c940dd3192da7729f9b79ea7b 232 Pfam PF01618 MotA/TolQ/ExbB proton channel family 95 194 3.3E-22 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel DA442_12300 158458de1e28522ef6a72799e03c72e8 68 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 56 3.8E-20 T 14-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 DA442_12300 158458de1e28522ef6a72799e03c72e8 68 Pfam PF04995 Heme exporter protein D (CcmD) 13 55 9.0E-17 T 14-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 DA442_12890 1dca48d5b9cbdbf8c07eb378cd9bd7ab 63 Pfam PF14056 Domain of unknown function (DUF4250) 9 62 1.8E-20 T 14-10-2018 IPR025346 Protein of unknown function DUF4250 DA442_01625 d3eaf930a321d9c09d27a83a02dbcb44 301 TIGRFAM TIGR03899 TIGR03899: TIGR03899 family protein 40 289 1.2E-109 T 14-10-2018 IPR021254 Protein of unknown function DUF2806 DA442_01625 d3eaf930a321d9c09d27a83a02dbcb44 301 Pfam PF10987 Protein of unknown function (DUF2806) 61 279 5.1E-86 T 14-10-2018 IPR021254 Protein of unknown function DUF2806 DA442_21680 67b8da02f5343a77547b20e68db567f2 66 SUPERFAMILY SSF116734 10 52 2.29E-5 T 14-10-2018 DA442_09710 fc1a716e0b9ba88ef40970c19547ff6e 30 Pfam PF11665 Protein of unknown function (DUF3265) 3 30 6.0E-15 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_13585 5c4508267d513e8327be013ffeb94612 438 Pfam PF13657 HipA N-terminal domain 8 117 8.7E-21 T 14-10-2018 IPR017508 HipA, N-terminal subdomain 1 DA442_13585 5c4508267d513e8327be013ffeb94612 438 Pfam PF07804 HipA-like C-terminal domain 174 411 1.6E-46 T 14-10-2018 IPR012893 HipA-like, C-terminal DA442_02040 d2c326a4fbe190de08c8397fb6e129c1 350 Pfam PF14072 DNA-sulfur modification-associated 14 151 3.7E-14 T 14-10-2018 IPR017642 DNA sulphur modification protein DndB DA442_02040 d2c326a4fbe190de08c8397fb6e129c1 350 TIGRFAM TIGR03187 DGQHR: DGQHR domain 7 292 1.9E-45 T 14-10-2018 IPR017601 DGQHR-containing domain DA442_04385 3ef3128db6b17e3e51d02feb5ab367d0 73 Pfam PF10981 Protein of unknown function (DUF2788) 18 67 4.4E-19 T 14-10-2018 IPR021249 Protein of unknown function DUF2788 DA442_00745 4c590c26ba940173db7169850d685549 253 Pfam PF01203 Type II secretion system (T2SS), protein N 36 247 6.0E-58 T 14-10-2018 IPR022792 Type II secretion system, protein N DA442_21930 f41010299d8542b5de3dc4eb2ecbd7fe 563 Pfam PF02652 L-lactate permease 7 548 1.5E-106 T 14-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 DA442_21930 f41010299d8542b5de3dc4eb2ecbd7fe 563 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 4 553 2.4E-102 T 14-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 DA442_05185 660dc5cc098d1066fd732426909047ab 222 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 8 205 9.6E-8 T 14-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 DA442_13365 043d625e33977edb9408b0c8a0fc9627 69 Pfam PF06568 Domain of unknown function (DUF1127) 24 59 5.5E-11 T 14-10-2018 IPR009506 Protein of unknown function DUF1127 DA442_03730 c838035ff294595391f79e160b558804 156 Pfam PF07295 Zinc-ribbon containing domain 14 152 4.4E-47 T 14-10-2018 IPR009912 Zinc-ribbon containing domain DA442_08300 6f81cde2f507e13326935cd44b1d23e4 40 Pfam PF12472 Phage related protein 1 37 2.5E-5 T 14-10-2018 IPR021096 Vibrio phage VSK, Orf152 DA442_12120 c76473e77b7b0c470a0d7a2950ae84c6 163 Pfam PF02674 Colicin V production protein 4 142 6.1E-36 T 14-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 DA442_22945 9fecc572988eaa2734effbaac024db8a 173 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 26 157 4.4E-29 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ DA442_04280 744aaf46e3703e5d71c18256901d2b16 69 ProDom PD057827 ZN-RIBBON HI1126 PM0127 TRANSMEMBRANE ORF196EGC129 MEMBRANE SO2423 GLL0157 1 56 4.0E-4 T 14-10-2018 DA442_09840 faec20ab3f01f8eb964d3671c4ab2cf1 173 Pfam PF12874 Zinc-finger of C2H2 type 4 23 3.8E-4 T 14-10-2018 DA442_12040 d3d7925cb235c99d6892ccb724b5f5f4 82 Pfam PF04226 Transglycosylase associated protein 33 81 4.9E-13 T 14-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 DA442_24300 41e8b0e5490b01c3e30a677893bf8862 104 SUPERFAMILY SSF54909 3 79 9.12E-12 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel DA442_02200 d5ee8f466d1dc26caef7374b3eccafbc 147 Pfam PF06853 Protein of unknown function (DUF1249) 27 139 2.4E-38 T 14-10-2018 IPR009659 Protein of unknown function DUF1249 DA442_04630 6e83786b1a91f134529db85f69e717c0 203 Pfam PF11659 Protein of unknown function (DUF3261) 55 198 4.5E-32 T 14-10-2018 IPR021675 Protein of unknown function DUF3261 DA442_17355 846ec9587be493a5a21b63e2e0784cdc 218 Pfam PF03006 Haemolysin-III related 11 208 4.2E-39 T 14-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 DA442_17355 846ec9587be493a5a21b63e2e0784cdc 218 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 14 214 3.7E-69 T 14-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 DA442_09755 fb0b3b803382e9cebd551ba4c0ba90a7 29 Pfam PF11665 Protein of unknown function (DUF3265) 2 29 8.9E-15 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_12255 412befb895879e653a7df9854da8779d 242 Pfam PF11859 Protein of unknown function (DUF3379) 1 238 3.7E-88 T 14-10-2018 IPR021806 Protein of unknown function DUF3379 DA442_13485 b9895dda77d9653f202e55dc38c71d10 462 Pfam PF06122 Conjugative relaxosome accessory transposon protein 28 388 4.2E-108 T 14-10-2018 IPR010927 Type IV conjugative transfer system protein TraH DA442_19335 7f95c9a1094ee18ccd605c564d14230e 122 Pfam PF12472 Phage related protein 63 119 2.7E-21 T 14-10-2018 IPR021096 Vibrio phage VSK, Orf152 DA442_23385 6d363609de8b91e2dbea6a57653dffd4 117 Pfam PF04219 Protein of unknown function, DUF 12 100 4.7E-36 T 14-10-2018 IPR007335 Protein of unknown function DUF413 DA442_02465 c86c04312bbd2b3d66dc588fc2c3da90 142 Pfam PF07386 Protein of unknown function (DUF1499) 30 135 5.1E-25 T 14-10-2018 IPR010865 Protein of unknown function DUF1499 DA442_02465 c86c04312bbd2b3d66dc588fc2c3da90 142 PIRSF PIRSF026426 1 142 1.3E-49 T 14-10-2018 IPR010865 Protein of unknown function DUF1499 DA442_07035 66255398d985d19b76836193b4bd60aa 135 Pfam PF06530 Phage antitermination protein Q 12 121 1.2E-15 T 14-10-2018 IPR010534 Bacteriophage 933W, GpQ GO:0003677|GO:0060567 DA442_19850 3483436d19f568e1566ba808821a4e2b 243 Pfam PF03591 AzlC protein 32 171 2.0E-34 T 14-10-2018 IPR011606 Branched-chain amino acid transport, permease DA442_13665 3cf83040fc4607b46eb6c56209347602 208 Pfam PF05309 TraE protein 2 177 1.8E-30 T 14-10-2018 IPR007973 Pilus assembly TraE GO:0000746 DA442_13540 5b3ff17f3a734fad19e88adaeea30579 317 Pfam PF11348 Protein of unknown function (DUF3150) 6 259 7.5E-101 T 14-10-2018 IPR021496 Protein of unknown function DUF3150 DA442_24790 e91b86011fcfeeee5bf1f22bb8fcdfa1 172 Pfam PF05433 Glycine zipper 2TM domain 67 108 3.7E-9 T 14-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 DA442_22535 f2b7d8791b6d186830ec8fcb942e78e3 305 Pfam PF04018 Domain of unknown function (DUF368) 13 257 1.7E-96 T 14-10-2018 IPR007163 Protein of unknown function DUF368 DA442_19065 1e2f8f484f414586595e217045413062 169 Gene3D G3DSA:3.40.630.30 4 147 6.9E-6 T 14-10-2018 DA442_02575 37303fa4eb4cc519f46dfa6353fdcc3a 61 Pfam PF12065 Protein of unknown function (DUF3545) 1 60 9.2E-26 T 14-10-2018 IPR021932 Protein of unknown function DUF3545 DA442_23635 6d779c4e5075278ad5c706219e42c014 194 Pfam PF01810 LysE type translocator 17 188 8.1E-16 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DA442_10490 ea0ac7d5d70fea4b99169f235c6c185f 29 Pfam PF11665 Protein of unknown function (DUF3265) 2 29 2.3E-16 T 14-10-2018 IPR021681 Protein of unknown function DUF3265 DA442_07265 4366d18f2912cc17b9abcb8d33fca765 98 Pfam PF03692 Putative zinc- or iron-chelating domain 17 86 2.0E-10 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein DA442_23400 162535a7d42f92af49a07521739f2295 147 Pfam PF07681 DoxX 17 103 2.5E-23 T 14-10-2018 IPR032808 DoxX family DA442_10780 71de4678b73efcc3b1be82047b7422b5 221 Pfam PF11201 Protein of unknown function (DUF2982) 67 216 2.9E-62 T 14-10-2018 IPR021367 Protein of unknown function DUF2982 DA442_22305 8d058912e65a143bda717ffc596e2fba 724 Pfam PF04632 Fusaric acid resistance protein family 6 524 1.9E-42 T 14-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 DA442_15655 cd7ab27bc75990a9798649054f82986b 90 Pfam PF12292 Protein of unknown function (DUF3624) 1 79 9.2E-37 T 14-10-2018 IPR022072 Protein of unknown function DUF3624 DA442_19470 3f838772475177be0fb5d479e2fcf21a 93 Pfam PF10115 Transcriptional activator HlyU 2 92 2.2E-40 T 14-10-2018 IPR018772 Transcription activator HlyU DA442_16785 b5cfbdadbe5d9ffca382a4afe1f4e96b 136 Pfam PF03748 Flagellar basal body-associated protein FliL 34 136 1.2E-19 T 14-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 DA442_13655 3b11dd4ce9e0bccd471788220c62d41c 429 Pfam PF03743 Bacterial conjugation TrbI-like protein 213 416 5.0E-39 T 14-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI DA442_01650 5df74fec23ba084e9d7c6c78e597d233 99 Pfam PF10795 Protein of unknown function (DUF2607) 3 97 8.6E-37 T 14-10-2018 IPR019731 Protein of unknown function DUF2607